Query 019523
Match_columns 339
No_of_seqs 310 out of 2487
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 03:08:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019523.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019523hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ozl_A PDHE1-A type I, pyruvat 100.0 2.9E-70 9.8E-75 526.9 33.9 305 1-316 43-349 (365)
2 1qs0_A 2-oxoisovalerate dehydr 100.0 8.6E-69 2.9E-73 523.1 29.8 308 1-316 83-398 (407)
3 1w85_A Pyruvate dehydrogenase 100.0 1.1E-67 3.9E-72 509.9 31.8 299 1-316 53-353 (368)
4 2bfd_A 2-oxoisovalerate dehydr 100.0 1.9E-65 6.6E-70 499.3 31.5 308 1-316 64-373 (400)
5 1umd_A E1-alpha, 2-OXO acid de 100.0 2.1E-63 7.2E-68 480.9 32.2 308 1-316 45-354 (367)
6 2yic_A 2-oxoglutarate decarbox 100.0 4.8E-53 1.6E-57 443.8 19.3 293 1-297 127-450 (868)
7 2xt6_A 2-oxoglutarate decarbox 100.0 4.6E-52 1.6E-56 445.9 20.0 294 1-298 372-696 (1113)
8 2jgd_A 2-oxoglutarate dehydrog 100.0 3.5E-51 1.2E-55 431.8 17.2 291 1-297 207-522 (933)
9 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 2.1E-28 7.2E-33 251.1 17.8 211 5-239 33-291 (621)
10 2o1x_A 1-deoxy-D-xylulose-5-ph 99.9 1.5E-27 5E-32 245.2 13.6 211 5-238 35-295 (629)
11 1gpu_A Transketolase; transfer 99.9 1.8E-26 6.3E-31 238.5 20.0 163 93-259 109-281 (680)
12 2e6k_A Transketolase; structur 99.9 3.9E-27 1.3E-31 242.6 13.9 161 94-259 112-281 (651)
13 1r9j_A Transketolase; domains, 99.9 4E-25 1.4E-29 228.2 22.8 159 94-256 110-278 (673)
14 3rim_A Transketolase, TK; TPP, 99.9 5.2E-25 1.8E-29 227.0 20.1 144 94-241 127-278 (700)
15 2r8o_A Transketolase 1, TK 1; 99.9 2.6E-25 9E-30 229.7 15.9 160 93-256 107-276 (669)
16 4feg_A Pyruvate oxidase; carba 99.9 2.9E-26 9.9E-31 234.6 7.6 197 61-276 370-596 (603)
17 1itz_A Transketolase; calvin c 99.9 5E-24 1.7E-28 220.2 19.2 158 94-255 121-289 (675)
18 3l84_A Transketolase; TKT, str 99.9 3.9E-24 1.3E-28 218.8 18.0 143 93-240 107-250 (632)
19 3uk1_A Transketolase; structur 99.9 1.7E-23 5.9E-28 216.2 21.0 141 94-239 149-294 (711)
20 3m49_A Transketolase; alpha-be 99.9 4.3E-23 1.5E-27 212.8 21.1 142 94-240 134-281 (690)
21 3kom_A Transketolase; rossmann 99.9 1.6E-23 5.6E-28 215.4 17.1 142 94-240 110-257 (663)
22 3mos_A Transketolase, TK; thia 99.9 2E-23 6.9E-28 213.6 14.1 134 95-240 116-250 (616)
23 2qtc_A Pyruvate dehydrogenase 99.9 1.3E-22 4.3E-27 213.8 14.9 233 19-256 102-423 (886)
24 1v5e_A Pyruvate oxidase; oxido 99.8 3.2E-20 1.1E-24 189.4 7.3 157 62-234 364-541 (590)
25 2pan_A Glyoxylate carboligase; 99.8 6.4E-20 2.2E-24 188.0 7.3 158 62-234 393-582 (616)
26 1ozh_A ALS, acetolactate synth 99.8 6.6E-20 2.3E-24 186.2 5.4 153 62-233 371-544 (566)
27 1q6z_A BFD, BFDC, benzoylforma 99.8 5E-20 1.7E-24 185.5 4.2 152 61-232 352-525 (528)
28 2pgn_A Cyclohexane-1,2-dione h 99.8 1.3E-19 4.5E-24 184.8 6.6 157 61-236 374-551 (589)
29 1ybh_A Acetolactate synthase, 99.8 2.2E-19 7.5E-24 183.2 6.1 157 61-236 376-562 (590)
30 2uz1_A Benzaldehyde lyase; thi 99.8 1.7E-19 5.8E-24 183.0 4.1 155 61-232 369-546 (563)
31 3eya_A Pyruvate dehydrogenase 99.8 3.9E-19 1.3E-23 179.9 6.4 155 61-234 356-531 (549)
32 1t9b_A Acetolactate synthase, 99.8 2.3E-19 7.7E-24 185.7 4.5 155 62-235 461-640 (677)
33 2iht_A Carboxyethylarginine sy 99.7 3.2E-19 1.1E-23 181.4 4.6 153 61-232 381-561 (573)
34 1ovm_A Indole-3-pyruvate decar 99.7 3.6E-19 1.2E-23 180.1 4.7 152 62-232 360-532 (552)
35 2vbf_A Branched-chain alpha-ke 99.7 7.7E-19 2.6E-23 178.4 5.5 153 61-232 376-551 (570)
36 2vk8_A Pyruvate decarboxylase 99.7 5.7E-19 2E-23 179.1 4.1 157 61-232 364-542 (563)
37 2wvg_A PDC, pyruvate decarboxy 99.7 1.2E-18 4.1E-23 176.9 6.2 153 62-233 365-542 (568)
38 2vbi_A Pyruvate decarboxylase; 99.7 8.7E-19 3E-23 177.9 5.0 154 61-233 360-534 (566)
39 2nxw_A Phenyl-3-pyruvate decar 99.7 4.5E-19 1.5E-23 180.0 2.3 152 62-232 374-542 (565)
40 2c31_A Oxalyl-COA decarboxylas 99.7 1.4E-18 4.8E-23 176.4 5.6 154 61-234 374-549 (568)
41 2q28_A Oxalyl-COA decarboxylas 99.7 4.1E-18 1.4E-22 172.8 6.9 154 61-235 369-547 (564)
42 2x7j_A 2-succinyl-5-enolpyruvy 99.7 1.1E-18 3.7E-23 178.6 0.3 152 61-232 404-580 (604)
43 3hww_A 2-succinyl-5-enolpyruvy 99.7 6.1E-18 2.1E-22 171.4 5.7 151 61-232 366-539 (556)
44 3lq1_A 2-succinyl-5-enolpyruvy 99.6 7E-17 2.4E-21 164.3 2.1 152 61-233 385-561 (578)
45 3ahc_A Phosphoketolase, xylulo 99.5 1.1E-14 3.9E-19 151.4 11.0 131 93-234 168-322 (845)
46 2c42_A Pyruvate-ferredoxin oxi 99.4 1.1E-13 3.9E-18 150.6 9.4 161 129-296 953-1167(1231)
47 2pgn_A Cyclohexane-1,2-dione h 94.0 0.36 1.2E-05 48.5 11.7 96 128-231 68-165 (589)
48 3eya_A Pyruvate dehydrogenase 93.9 0.2 6.9E-06 49.9 9.5 94 129-230 67-161 (549)
49 2uz1_A Benzaldehyde lyase; thi 93.8 0.21 7.2E-06 49.9 9.4 96 130-231 68-164 (563)
50 1ybh_A Acetolactate synthase, 93.7 0.19 6.4E-06 50.6 8.9 107 107-230 64-171 (590)
51 4feg_A Pyruvate oxidase; carba 93.5 0.24 8.4E-06 49.9 9.4 93 130-230 77-170 (603)
52 1ozh_A ALS, acetolactate synth 93.5 0.19 6.5E-06 50.3 8.4 94 130-231 75-170 (566)
53 2vbi_A Pyruvate decarboxylase; 93.3 0.4 1.4E-05 47.9 10.5 97 130-231 67-169 (566)
54 2iht_A Carboxyethylarginine sy 93.2 0.21 7.2E-06 50.0 8.4 95 130-231 75-171 (573)
55 2wvg_A PDC, pyruvate decarboxy 93.1 0.48 1.6E-05 47.3 10.7 98 129-231 66-169 (568)
56 2nxw_A Phenyl-3-pyruvate decar 92.9 0.35 1.2E-05 48.4 9.4 97 130-231 86-186 (565)
57 1yd7_A 2-keto acid:ferredoxin 92.9 0.12 4.1E-06 49.5 5.7 108 105-230 76-187 (395)
58 1t9b_A Acetolactate synthase, 92.8 0.31 1E-05 50.0 8.9 93 129-229 146-240 (677)
59 2x7j_A 2-succinyl-5-enolpyruvy 92.2 0.45 1.6E-05 47.9 9.2 97 129-231 95-198 (604)
60 2pan_A Glyoxylate carboligase; 91.7 0.69 2.4E-05 46.7 9.9 93 131-230 94-187 (616)
61 1q6z_A BFD, BFDC, benzoylforma 91.5 0.58 2E-05 46.2 8.9 109 107-231 52-161 (528)
62 3lq1_A 2-succinyl-5-enolpyruvy 90.8 0.86 2.9E-05 45.6 9.5 107 108-230 64-177 (578)
63 1v5e_A Pyruvate oxidase; oxido 90.2 0.66 2.3E-05 46.6 8.0 93 130-230 70-163 (590)
64 2q28_A Oxalyl-COA decarboxylas 90.1 0.46 1.6E-05 47.4 6.7 95 130-231 72-169 (564)
65 2c31_A Oxalyl-COA decarboxylas 90.0 0.48 1.6E-05 47.3 6.8 94 130-230 74-170 (568)
66 2r8o_A Transketolase 1, TK 1; 89.5 2.4 8.2E-05 43.3 11.6 101 106-228 415-518 (669)
67 3mos_A Transketolase, TK; thia 89.0 1 3.5E-05 45.6 8.3 102 106-228 368-470 (616)
68 2e6k_A Transketolase; structur 88.8 2.3 7.9E-05 43.3 10.9 101 106-228 410-513 (651)
69 1ovm_A Indole-3-pyruvate decar 88.4 1.1 3.7E-05 44.5 7.9 108 107-231 57-170 (552)
70 2vbf_A Branched-chain alpha-ke 88.2 1.3 4.3E-05 44.2 8.4 96 130-231 89-190 (570)
71 2vk8_A Pyruvate decarboxylase 88.0 0.85 2.9E-05 45.4 7.0 96 131-231 69-170 (563)
72 1itz_A Transketolase; calvin c 87.8 1.4 4.7E-05 45.2 8.4 101 106-228 427-531 (675)
73 1r9j_A Transketolase; domains, 87.2 2.8 9.5E-05 42.9 10.3 101 106-228 415-518 (673)
74 2o1s_A 1-deoxy-D-xylulose-5-ph 86.8 3.1 0.00011 42.0 10.4 102 105-228 373-476 (621)
75 1ik6_A Pyruvate dehydrogenase; 86.6 2.2 7.6E-05 40.3 8.6 98 105-227 110-218 (369)
76 3kom_A Transketolase; rossmann 86.6 1.9 6.3E-05 44.1 8.6 104 105-228 415-519 (663)
77 3l84_A Transketolase; TKT, str 85.5 3 0.0001 42.3 9.4 100 106-228 395-497 (632)
78 3hww_A 2-succinyl-5-enolpyruvy 84.6 4 0.00014 40.4 9.8 94 129-230 72-170 (556)
79 1gpu_A Transketolase; transfer 84.4 2 6.8E-05 44.0 7.6 101 106-228 422-526 (680)
80 2o1x_A 1-deoxy-D-xylulose-5-ph 84.3 2.1 7.1E-05 43.4 7.6 100 105-228 376-478 (629)
81 3m49_A Transketolase; alpha-be 84.1 5.8 0.0002 40.7 10.9 102 106-228 440-543 (690)
82 2ozl_B PDHE1-B, pyruvate dehyd 83.8 2.7 9.1E-05 39.2 7.6 98 105-228 74-183 (341)
83 1qs0_B 2-oxoisovalerate dehydr 78.6 5.5 0.00019 36.8 7.8 100 105-228 64-173 (338)
84 3uk1_A Transketolase; structur 78.4 8.1 0.00028 39.7 9.6 99 106-227 461-562 (711)
85 1w85_B Pyruvate dehydrogenase 77.6 8.8 0.0003 35.2 8.8 98 105-227 62-170 (324)
86 1umd_B E1-beta, 2-OXO acid deh 77.5 12 0.00042 34.2 9.8 98 105-227 63-171 (324)
87 2c42_A Pyruvate-ferredoxin oxi 75.9 7.4 0.00025 42.6 8.8 113 105-237 66-178 (1231)
88 3rim_A Transketolase, TK; TPP, 75.4 14 0.00048 37.9 10.3 74 147-228 472-550 (700)
89 2bfd_B 2-oxoisovalerate dehydr 71.7 8.7 0.0003 35.6 7.2 99 105-228 79-189 (342)
90 3tqr_A Phosphoribosylglycinami 63.1 15 0.00053 31.7 6.5 56 128-200 5-62 (215)
91 3o1l_A Formyltetrahydrofolate 61.0 20 0.00068 32.8 7.1 54 127-199 104-160 (302)
92 3obi_A Formyltetrahydrofolate 60.9 21 0.00073 32.3 7.3 54 128-200 89-146 (288)
93 3n0v_A Formyltetrahydrofolate 60.3 20 0.00069 32.4 7.0 53 128-199 90-145 (286)
94 3nrb_A Formyltetrahydrofolate 57.5 24 0.00081 32.0 7.0 56 127-200 87-145 (287)
95 3lou_A Formyltetrahydrofolate 56.3 20 0.00068 32.6 6.3 54 127-199 94-150 (292)
96 3kcq_A Phosphoribosylglycinami 55.3 23 0.00077 30.7 6.2 57 128-201 8-67 (215)
97 3ibs_A Conserved hypothetical 54.7 61 0.0021 26.8 8.9 72 129-200 111-197 (218)
98 4ds3_A Phosphoribosylglycinami 54.5 44 0.0015 28.7 7.9 56 128-200 7-65 (209)
99 2zzd_B Thiocyanate hydrolase s 51.3 21 0.00074 29.3 5.0 32 259-290 113-144 (157)
100 3p9x_A Phosphoribosylglycinami 50.0 31 0.0011 29.7 6.2 54 130-200 4-60 (211)
101 4hhu_A OR280; engineered prote 48.8 69 0.0024 24.9 7.3 94 131-224 4-115 (170)
102 3da8_A Probable 5'-phosphoribo 46.7 38 0.0013 29.2 6.2 52 130-199 14-67 (215)
103 1n3y_A Integrin alpha-X; alpha 46.3 64 0.0022 26.2 7.6 82 129-218 110-194 (198)
104 3av3_A Phosphoribosylglycinami 44.8 26 0.00091 30.0 4.9 55 130-200 5-61 (212)
105 2yic_A 2-oxoglutarate decarbox 42.1 84 0.0029 33.0 9.1 106 105-227 596-708 (868)
106 2jgd_A 2-oxoglutarate dehydrog 41.9 80 0.0027 33.4 8.9 103 105-226 664-775 (933)
107 2xt6_A 2-oxoglutarate decarbox 40.7 87 0.003 33.9 9.1 106 105-227 841-953 (1113)
108 2x5n_A SPRPN10, 26S proteasome 37.8 42 0.0014 28.1 5.0 33 131-163 109-141 (192)
109 4hhu_A OR280; engineered prote 36.2 41 0.0014 26.3 4.2 33 192-224 2-34 (170)
110 3hyn_A Putative signal transdu 35.6 42 0.0014 28.3 4.5 38 129-166 80-118 (189)
111 1meo_A Phosophoribosylglycinam 35.2 1.3E+02 0.0044 25.6 7.8 54 130-200 2-58 (209)
112 2ywr_A Phosphoribosylglycinami 34.5 39 0.0013 29.0 4.3 56 130-201 3-60 (216)
113 3ghf_A Septum site-determining 32.8 60 0.0021 25.1 4.8 46 185-230 9-56 (120)
114 1x0u_A Hypothetical methylmalo 30.5 49 0.0017 32.6 4.8 43 129-171 90-140 (522)
115 2kl8_A OR15; structural genomi 30.0 62 0.0021 22.4 3.8 29 196-224 5-33 (85)
116 1on3_A Methylmalonyl-COA carbo 29.6 55 0.0019 32.2 5.0 44 128-171 93-144 (523)
117 4aec_A Cysteine synthase, mito 28.9 1.2E+02 0.004 29.0 7.1 60 149-222 189-249 (430)
118 3auf_A Glycinamide ribonucleot 28.8 72 0.0024 27.7 5.1 55 130-200 24-80 (229)
119 1jkx_A GART;, phosphoribosylgl 28.7 89 0.003 26.6 5.7 54 130-200 2-58 (212)
120 1ugp_A NitrIle hydratase alpha 27.8 83 0.0028 26.7 5.0 29 259-287 20-48 (203)
121 3u9r_B MCC beta, methylcrotony 27.5 1.2E+02 0.0041 30.1 7.0 43 129-171 120-170 (555)
122 4b4t_W RPN10, 26S proteasome r 26.9 68 0.0023 28.6 4.7 36 129-164 108-143 (268)
123 2bzr_A Propionyl-COA carboxyla 26.5 62 0.0021 32.1 4.7 44 128-171 106-157 (548)
124 1j0a_A 1-aminocyclopropane-1-c 26.1 1.6E+02 0.0053 26.5 7.2 57 132-202 72-129 (325)
125 2w84_A Peroxisomal membrane pr 25.8 75 0.0026 22.3 3.7 26 257-283 33-58 (70)
126 2x24_A Acetyl-COA carboxylase; 25.8 50 0.0017 34.3 4.0 45 128-172 119-171 (793)
127 3hbm_A UDP-sugar hydrolase; PS 25.0 2E+02 0.007 25.4 7.6 34 133-167 3-38 (282)
128 2pju_A Propionate catabolism o 25.0 70 0.0024 27.7 4.3 82 133-220 109-198 (225)
129 3iav_A Propionyl-COA carboxyla 24.9 71 0.0024 31.5 4.8 40 129-168 96-143 (530)
130 3qyh_A CO-type nitrIle hydrata 24.9 92 0.0031 26.9 4.8 29 259-287 40-68 (226)
131 2q5c_A NTRC family transcripti 24.4 83 0.0028 26.4 4.6 83 132-219 96-186 (196)
132 2f9i_B Acetyl-coenzyme A carbo 23.8 87 0.003 28.1 4.9 40 129-168 120-167 (285)
133 3t5g_A GTP-binding protein RHE 23.6 2E+02 0.0069 22.3 6.8 63 155-221 109-171 (181)
134 2pqm_A Cysteine synthase; OASS 22.8 2.8E+02 0.0097 25.0 8.4 19 149-167 92-111 (343)
135 1use_A VAsp, vasodilator-stimu 22.8 1.4E+02 0.0047 19.1 4.2 12 276-287 23-34 (45)
136 2p1h_A APAF-1, apoptotic prote 22.7 54 0.0018 23.8 2.7 25 259-283 24-48 (94)
137 1vrg_A Propionyl-COA carboxyla 22.5 1E+02 0.0034 30.4 5.3 44 128-171 96-147 (527)
138 3n6r_B Propionyl-COA carboxyla 22.1 94 0.0032 30.6 5.0 40 129-168 104-151 (531)
139 3tbh_A O-acetyl serine sulfhyd 21.9 1.5E+02 0.0052 26.8 6.2 41 149-201 86-127 (334)
140 3ff5_A PEX14P, peroxisomal bio 21.8 1E+02 0.0034 20.5 3.6 24 257-281 28-51 (54)
141 2ioj_A Hypothetical protein AF 21.2 99 0.0034 24.1 4.2 51 132-200 54-106 (139)
142 1pix_A Glutaconyl-COA decarbox 20.8 99 0.0034 30.9 4.9 73 129-202 104-192 (587)
143 3k8x_A Acetyl-COA carboxylase; 20.2 1.1E+02 0.0037 31.5 5.1 45 128-172 103-155 (758)
No 1
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=100.00 E-value=2.9e-70 Score=526.92 Aligned_cols=305 Identities=39% Similarity=0.711 Sum_probs=288.6
Q ss_pred CchhHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHccCCCCeeeeCCCCcccccccCCCHHHHHHHhhCCCCCCCc
Q 019523 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCR 80 (339)
Q Consensus 1 m~~~R~~e~~~~~~~~~g~~~g~~~~~~G~Ea~~~~~~~~l~~~D~i~~~~R~~~~~l~~g~~p~~~~~el~~~~~~~~~ 80 (339)
|+++|.||+++..+|+||++.||+|++.||||+++|++.+|+++|+|+++||+|++.+++|+++.++|.+++++..+.+.
T Consensus 43 M~~~R~~e~~~~~l~~~g~i~gf~~~~~GqEa~~vg~~~al~~~D~i~~~yR~~~~~~~~G~~~~~i~~e~~g~~~g~~~ 122 (365)
T 2ozl_A 43 MQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAK 122 (365)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCSCCCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCHHHHHHHHTTCTTSTTT
T ss_pred HHHHHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHhhCCCCEEehHHHHHHHHHhcCCCHHHHHHHHcCCCCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CCCCccccccCCCcccccccccccchHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCE
Q 019523 81 GQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPI 160 (339)
Q Consensus 81 g~~G~~h~~~~~~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpv 160 (339)
|++|++|+++ .++.+++|+||+++|+|+|+|+|.+++ +++++|||++|||++++|.++|+|++|+.|+||+
T Consensus 123 g~gg~~H~~~--~~~~~~~g~~G~~lp~A~G~A~A~~~~-------~~~~~vv~~~GDGa~~~G~~~Ealn~A~~~~lpv 193 (365)
T 2ozl_A 123 GKGGSMHMYA--KNFYGGNGIVGAQVPLGAGIALACKYN-------GKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPC 193 (365)
T ss_dssp TSSCTTCCCB--TTBCCCCCSTTTHHHHHHHHHHHHHHH-------TCCCCEEEEEETTGGGCHHHHHHHHHHHHTTCCE
T ss_pred CCCCCCCcCc--cccCCCcchhhhhhHHHHHHHHHHHhc-------CCCceEEEEECchhhhccHHHHHHHHHHHHCcCE
Confidence 9999999964 477888899999999999999998877 4788999999999999999999999999999999
Q ss_pred EEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCCC
Q 019523 161 VFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240 (339)
Q Consensus 161 i~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~D 240 (339)
||||+||+|+++++...+...+++.+ +++|+++++|||+|+++|++++++|+++++++++|+|||+.|||..||+++|
T Consensus 194 i~vv~NN~~g~~t~~~~~~~~~~~~~--ra~g~p~~~VdG~D~~av~~a~~~A~~~~r~~~gP~lIe~~t~R~~gHs~~D 271 (365)
T 2ozl_A 194 IFICENNRYGMGTSVERAAASTDYYK--RGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHEMSD 271 (365)
T ss_dssp EEEEEECSEETTEEHHHHCSCCCGGG--TTTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECCCSSCSSTTC
T ss_pred EEEEECCCcccCCCcccccCCCCHHH--HhCCCCEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeecCCCCCCCC
Confidence 99999999999987666656677876 6899999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCHHHHHHHhh-CChHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHhhhCCCCChhhhhhcccCCCCC
Q 019523 241 PD-ELRDPAEKARYAA-RDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPPPRSQLLENVFADPKG 316 (339)
Q Consensus 241 ~~-~yr~~~e~~~~~~-~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~v~~~~~~ 316 (339)
++ .||+++|++.|++ +||+.+|+++|+++|+++++++++|+++++++|++++++|+++|.|+++++|++||+++++
T Consensus 272 ~~~~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~p~p~~~~~~~~vy~~~~~ 349 (365)
T 2ozl_A 272 PGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPP 349 (365)
T ss_dssp CSCSSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCCCGGGTTCSSSSSCCC
T ss_pred CCcccCCHHHHHHHHhCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhhhcCCCCh
Confidence 75 6999999999985 7999999999999999999999999999999999999999999999999999999987655
No 2
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=100.00 E-value=8.6e-69 Score=523.09 Aligned_cols=308 Identities=26% Similarity=0.405 Sum_probs=292.7
Q ss_pred CchhHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHccCCCCeeeeCCCCcccccccCCCHHHHHHHhhCCCCCCCc
Q 019523 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCR 80 (339)
Q Consensus 1 m~~~R~~e~~~~~~~~~g~~~g~~~~~~G~Ea~~~~~~~~l~~~D~i~~~~R~~~~~l~~g~~p~~~~~el~~~~~~~~~ 80 (339)
|+++|.||+++..+|+||++ +|+|++.||||+++|++.+|+++|+|+++||+|++.|++|+++.++|.+|+++..+.+.
T Consensus 83 M~~~R~fe~~~~~~~~qgr~-~~~~~~~GqEA~~vg~~~al~~~D~v~~~yR~~~~~l~~g~~~~~i~~el~g~~~~~~~ 161 (407)
T 1qs0_A 83 MLKTRIFDSRMVVAQRQKKM-SFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLK 161 (407)
T ss_dssp HHHHHHHHHHHHHHHHTTSS-SCCCCCTTTHHHHHHHHHHSCTTSEEECCSSCHHHHHHTTCCHHHHHHHHHTCTTCTTT
T ss_pred HHHHHHHHHHHHHHHhCCcc-ccCcCCCChHHHHHHHHHhcCCCCEEEecccchHHHHhcCCCHHHHHHHHhCCCCCCCC
Confidence 78999999999999999998 58999999999999999999999999999999999999999999999999999888888
Q ss_pred CCCCccccccCCCcccccccccccchHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCE
Q 019523 81 GQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPI 160 (339)
Q Consensus 81 g~~G~~h~~~~~~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpv 160 (339)
|+++++|+.....++.+++|+||+++|+|+|+|+|.+++ +++++|||++|||++++|.++|+|++|++|+||+
T Consensus 162 G~g~~~h~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~-------~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpv 234 (407)
T 1qs0_A 162 GRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIK-------GDTKIASAWIGDGATAESDFHTALTFAHVYRAPV 234 (407)
T ss_dssp TCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHT-------TCCCCEEEEEETGGGGSHHHHHHHHHHHHHTCCE
T ss_pred CCCceeecchhccCccccccccccchhHHHHHHHHHHHh-------CCCCEEEEEECCchhhcChHHHHHHHHHHHCcCE
Confidence 999999998877888899999999999999999998876 4788999999999999999999999999999999
Q ss_pred EEEEEcCCeeecccccccc-cChhhhhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCC
Q 019523 161 VFVVENNLWAIGMSHLRAT-SDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA 239 (339)
Q Consensus 161 i~vv~NN~~~i~~~~~~~~-~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~ 239 (339)
||||+||+|+++++...+. ..++++++|++||+++++|||+|+++|++++++|+++++++++|+|||+.|||+.||+++
T Consensus 235 i~Vv~NN~~gi~~~~~~~~~~~~d~a~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~Ghs~~ 314 (407)
T 1qs0_A 235 ILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTS 314 (407)
T ss_dssp EEEEEECSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCCSCSSTT
T ss_pred EEEEECCCcceeeccccccCCCCCHHHHHHHcCCeEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeeccCCcCCC
Confidence 9999999999998776665 568999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCCCHHHHHHHhhCChHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHhhh------CCCCChhhhhhcccC
Q 019523 240 D-PDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADE------SAPPPRSQLLENVFA 312 (339)
Q Consensus 240 D-~~~yr~~~e~~~~~~~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~------~~~p~~~~~~~~v~~ 312 (339)
| +..||+++|++.|+++|||.+|+++|+++|+++++++++|+++++++|++++++|++ +|.|+++++|++||+
T Consensus 315 Dd~~~Yr~~~e~~~~~~~DPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~~~~~p~p~~~~~~~~vy~ 394 (407)
T 1qs0_A 315 DDPSKYRPADDWSHFPLGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAASMFEDVYK 394 (407)
T ss_dssp CCGGGTSCTTHHHHCTTCCHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCCCCSSGGGSSSSS
T ss_pred CCccccCCHHHHHHHhcCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCHHHHHhhccC
Confidence 8 678999999999999999999999999999999999999999999999999999998 589999999999999
Q ss_pred CCCC
Q 019523 313 DPKG 316 (339)
Q Consensus 313 ~~~~ 316 (339)
++++
T Consensus 395 ~~~~ 398 (407)
T 1qs0_A 395 EMPD 398 (407)
T ss_dssp SCCH
T ss_pred CCCH
Confidence 8754
No 3
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=100.00 E-value=1.1e-67 Score=509.90 Aligned_cols=299 Identities=31% Similarity=0.479 Sum_probs=279.0
Q ss_pred CchhHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHccCCCCeeeeCCCCcccccccCCCHHHHHHHhhCCCCCCCc
Q 019523 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCR 80 (339)
Q Consensus 1 m~~~R~~e~~~~~~~~~g~~~g~~~~~~G~Ea~~~~~~~~l~~~D~i~~~~R~~~~~l~~g~~p~~~~~el~~~~~~~~~ 80 (339)
|+++|.||+++.+++++|++ ||+|++.||||+++|++.+|+++|+++++||+|++.+++|+++..+|.+++++.+
T Consensus 53 M~~~R~fe~~~~~~~~qgr~-g~~~~~~G~Ea~~vg~~~~l~~~D~v~~~~R~~~~~~~~G~~~~~~~~el~G~~~---- 127 (368)
T 1w85_A 53 MVYTRILDQRSISLNRQGRL-GFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFH---- 127 (368)
T ss_dssp HHHHHHHHHHHHHHHHTTSC-CSCCCCTTCHHHHHHHHHTCCTTCEEECCSSCHHHHHHTTCCHHHHHHHHHTCGG----
T ss_pred HHHHHHHHHHHHHHhhCCcc-ccCCCCCCHHHHHHHHHHhcCCcCEEEecchhHHHHHhcCCCHHHHHHHHCCCCC----
Confidence 78999999999999999999 9999999999999999999999999999999999999999999999999999764
Q ss_pred CCCCccccccCCCcccccccccccchHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCE
Q 019523 81 GQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPI 160 (339)
Q Consensus 81 g~~G~~h~~~~~~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpv 160 (339)
+|++| ...++.+++|+||+++|+|+|+|+|.+++ +++++|||++|||++++|.++|+|++|++|+||+
T Consensus 128 --G~~~h---~~~~~~~~~g~lG~~lp~AvG~A~A~~~~-------~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpv 195 (368)
T 1w85_A 128 --GNQIP---EGVNVLPPQIIIGAQYIQAAGVALGLKMR-------GKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPA 195 (368)
T ss_dssp --GGCCC---TTCCBCCCCCSTTHHHHHHHHHHHHHHHT-------TCSCCEEEEEETGGGGSHHHHHHHHHHHHTTCCE
T ss_pred --CCCCC---cccccCCCccccCccccHHHHHHHHhHhh-------CCCCeEEEEEchhhhhhcHHHHHHHHHHHHCcCE
Confidence 45566 45678889999999999999999998876 4788999999999999999999999999999999
Q ss_pred EEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCC-CC
Q 019523 161 VFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHS-LA 239 (339)
Q Consensus 161 i~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~-~~ 239 (339)
||||+||+|+++++...+.+.+++++++++||+++++|||+|+++|++++++|+++++++++|+|||+.|||..||+ ++
T Consensus 196 i~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~~r~~~gP~lIe~~t~r~~gHs~~~ 275 (368)
T 1w85_A 196 IFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSG 275 (368)
T ss_dssp EEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCSSCSCSSC
T ss_pred EEEEEcCCccceeccccccCCCCHHHHHHHCCCCEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeeccCCCCCCC
Confidence 99999999999988777777789999999999999999999999999999999999999999999999999999999 98
Q ss_pred C-CCCCCCHHHHHHHhhCChHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHhhhCCCCChhhhhhcccCCCCC
Q 019523 240 D-PDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPPPRSQLLENVFADPKG 316 (339)
Q Consensus 240 D-~~~yr~~~e~~~~~~~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~v~~~~~~ 316 (339)
| +..||+++|++.|+++||+.+|+++|+++|+++++++++|+++++++|++++++|+++|.|+++++|++||+++++
T Consensus 276 Ddp~~yr~~~e~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~p~p~~~~~~~~vy~~~~~ 353 (368)
T 1w85_A 276 DDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMFEELPF 353 (368)
T ss_dssp C------CHHHHHHHHTTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHTSCCCCHHHHHHTSCSSCCH
T ss_pred CCccccCCHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhhccCCCCh
Confidence 7 6789999999999999999999999999999999999999999999999999999999999999999999998654
No 4
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=100.00 E-value=1.9e-65 Score=499.33 Aligned_cols=308 Identities=26% Similarity=0.416 Sum_probs=274.1
Q ss_pred CchhHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHccCCCCeeeeCCCCcccccccCCCHHHHHHHhhCCCCCCCc
Q 019523 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCR 80 (339)
Q Consensus 1 m~~~R~~e~~~~~~~~~g~~~g~~~~~~G~Ea~~~~~~~~l~~~D~i~~~~R~~~~~l~~g~~p~~~~~el~~~~~~~~~ 80 (339)
|+++|.||+++.++++||++ +|+|++.||||+++|++.+|+++|+|+++||+|++.+++|+++.++|.+++++..+.+.
T Consensus 64 M~~~r~fe~~~~~~~~~gri-~~~~~~~GqEa~~vg~~~al~~~D~v~~~yR~~~~~~~~G~~~~~~l~e~~g~~~g~~~ 142 (400)
T 2bfd_A 64 MTLLNTMDRILYESQRQGRI-SFYMTNYGEEGTHVGSAAALDNTDLVFGQAREAGVLMYRDYPLELFMAQCYGNISDLGK 142 (400)
T ss_dssp HHHHHHHHHHHHHHHHTTSS-SCCCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCHHHHHHHHHTCTTCTTT
T ss_pred HHHHHHHHHHHHHHHhcCCc-ceeecCCChHHHHHHHHHhcCCCCEEEecCcCHHHHHHcCCCHHHHHHHhcCCCCCCCC
Confidence 78999999999999999999 48999999999999999999999999999999999999999999999999999888888
Q ss_pred CCCCccccccCCCcccccccccccchHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCE
Q 019523 81 GQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPI 160 (339)
Q Consensus 81 g~~G~~h~~~~~~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpv 160 (339)
|+++++|+.....++.+.+|+||+++|+|+|+|+|.+++ +++++|||++|||++++|.++|+|++|++|+||+
T Consensus 143 G~~~~~H~~~~~~~~~~~~g~lG~~lp~AvG~AlA~~~~-------~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpv 215 (400)
T 2bfd_A 143 GRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRA-------NANRVVICYFGEGAASEGDAHAGFNFAATLECPI 215 (400)
T ss_dssp TCSCSSCCCBTTTTBCCCCSSTTTHHHHHHHHHHHHHHH-------TCCCCEEEEEETTGGGSHHHHHHHHHHHHTTCCE
T ss_pred CCCCCcCCcccccCccccCccccccccHHHHHHHhhhhh-------CCCCeEEEEECchhhhcChHHHHHHHHHHHCcCE
Confidence 888999998777778888899999999999999998877 4688999999999999999999999999999999
Q ss_pred EEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCCC
Q 019523 161 VFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240 (339)
Q Consensus 161 i~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~D 240 (339)
||||+||+|+++++...+.+.+++++++++|||++++|||+|+++|++++++|++++|++++|+|||++|||..||+++|
T Consensus 216 i~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~~P~lIe~~tyR~~gHs~~D 295 (400)
T 2bfd_A 216 IFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHASTSD 295 (400)
T ss_dssp EEEEEECSEETTEEGGGTCSSSTTGGGTGGGTCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC--CC--
T ss_pred EEEEECCceeeeecccccCCCCCHHHHHHHcCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeeeeCCCCCCC
Confidence 99999999999998877777789999999999999999999999999999999999999999999999999999999998
Q ss_pred C-CCCCCHHHHHHHhhC-ChHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHhhhCCCCChhhhhhcccCCCCC
Q 019523 241 P-DELRDPAEKARYAAR-DPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPPPRSQLLENVFADPKG 316 (339)
Q Consensus 241 ~-~~yr~~~e~~~~~~~-dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~v~~~~~~ 316 (339)
+ ..||+++|++.|+++ |||.+|+++|++.|+++++++++++++++++|++++++|++.|.|+++++|++||++.+.
T Consensus 296 ~~~~Yr~~~e~~~~~~~~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~vy~~~~~ 373 (400)
T 2bfd_A 296 DSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPA 373 (400)
T ss_dssp -----------------CCHHHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHSCBCCGGGGSTTSSSSCCH
T ss_pred CCccCCCHHHHHHHHhcCCHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCH
Confidence 6 679999999999987 799999999999999999999999999999999999999999999999999999997643
No 5
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=100.00 E-value=2.1e-63 Score=480.94 Aligned_cols=308 Identities=34% Similarity=0.542 Sum_probs=292.0
Q ss_pred CchhHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHccCCC-CeeeeCCCCcccccccCCCHHHHHHHhhCCCCCCC
Q 019523 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE-DSVVSTYRDHVHALSKGVPARAVMSELFGKATGCC 79 (339)
Q Consensus 1 m~~~R~~e~~~~~~~~~g~~~g~~~~~~G~Ea~~~~~~~~l~~~-D~i~~~~R~~~~~l~~g~~p~~~~~el~~~~~~~~ 79 (339)
|+.+|.||.++..++++|++ |+++++.|||++++++..+|+++ |+++++||+|++.+.+|+++.++|.+++++.++.+
T Consensus 45 m~~~R~~~~~~~~~~~~G~~-g~~~~~~G~ea~~~~~~~~l~~~rD~i~~s~r~~~~~~~~G~~~~~~l~~~~g~~~g~~ 123 (367)
T 1umd_A 45 MLAARMLDERYTILIRTGKT-SFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPLKELLGQMLATKADPN 123 (367)
T ss_dssp HHHHHHHHHHHHHHHHTTSC-SCCCCCTTCHHHHHHHHHHSCTTTSEEECCTTTHHHHHHHTCCHHHHHHHHHTBTTCTT
T ss_pred HHHHHHHHHHHHHHhhCCCc-cCCCCCcCHHHHHHHHHHHcCCCCcEEEeCcHHHHHHHHcCCCHHHHHHHHhCCCCCCC
Confidence 67899999999999999999 89999999999999999999998 99999999999999999999999999999988887
Q ss_pred cCCCCccccccCCCcccccccccccchHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCC
Q 019523 80 RGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP 159 (339)
Q Consensus 80 ~g~~G~~h~~~~~~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp 159 (339)
.|.++++|+.....++.+.+|++|.++|.|+|+|+|.|+. +++++|||++|||++++|.++|+|++|+++++|
T Consensus 124 ~G~~~~~h~~~~~~~~~~~~g~lG~~l~~a~G~A~a~k~~-------~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lp 196 (367)
T 1umd_A 124 KGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLL-------RTGQVAVCTFGDGATSEGDWYAGINFAAVQGAP 196 (367)
T ss_dssp TTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHT-------TCCCCEEEEEETGGGGSHHHHHHHHHHHHTTCS
T ss_pred CCCCCCCCCcccccCcCCCCchhhhhhhHHHHHHHHHHHh-------CCCCeEEEEEcccccccCcHHHHHHHHHHhCcC
Confidence 7888888998777788889999999999999999998887 578899999999999999999999999999999
Q ss_pred EEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCC
Q 019523 160 IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA 239 (339)
Q Consensus 160 vi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~ 239 (339)
+|+||+||+|+++++...+.+.+++.+++++||+++++|||+|+.+|++++++|+++++++++|+|||+.|+|..||+++
T Consensus 197 vi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~av~~a~~~A~~~a~~~~gP~lIe~~t~r~~Ghs~~ 276 (367)
T 1umd_A 197 AVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSA 276 (367)
T ss_dssp EEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECCCCSCSSTT
T ss_pred EEEEEecCCeeeccChhhccCCCCHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeecCCCCCCC
Confidence 99999999999988776666678999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCCCHHHHHHHhhCChHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHhhhCCCCChhhhhhcccCCCCC
Q 019523 240 D-PDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPPPRSQLLENVFADPKG 316 (339)
Q Consensus 240 D-~~~yr~~~e~~~~~~~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~v~~~~~~ 316 (339)
| +..||+++|++.|+++||+.+|+++|+++|+++++++++|+++++++|++++++|+++|.|+++++|++||+++++
T Consensus 277 D~~~~Yr~~~e~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~vy~~~~~ 354 (367)
T 1umd_A 277 DDDSRYRPKEEVAFWRKKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVPPEWMFEDVFAEKPW 354 (367)
T ss_dssp CCGGGTSCHHHHHHHHTTCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCBCCGGGGGTTSSSSCCH
T ss_pred CCccccCCHHHHHHHHcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhhhcCCCCh
Confidence 8 4679999999999999999999999999999999999999999999999999999999999999999999998654
No 6
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=4.8e-53 Score=443.81 Aligned_cols=293 Identities=21% Similarity=0.246 Sum_probs=253.2
Q ss_pred CchhHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHccC------CCCeeee-CCCCcccccc--cCCCHHHHHHHh
Q 019523 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK------KEDSVVS-TYRDHVHALS--KGVPARAVMSEL 71 (339)
Q Consensus 1 m~~~R~~e~~~~~~~~~g~~~g~~~~~~G~Ea~~~~~~~~l~------~~D~i~~-~~R~~~~~l~--~g~~p~~~~~el 71 (339)
|+++|.||+++..+|++||++|+ .|||++++|++.+|+ ++|++++ +||+|++.|+ +|+++.++|+|+
T Consensus 127 m~~~R~fE~~l~~~~~~~k~~g~----~G~Ea~~~g~~~~l~~~~~l~~~D~v~gm~hRg~~~~Lan~~G~~~~~i~ae~ 202 (868)
T 2yic_A 127 LNAAEAFETFLQTKYVGQKRFSL----EGAETVIPMMDAVIDQCAEHGLDEVVIAMPHRGRLNVLANIVGKPYSQIFSEF 202 (868)
T ss_dssp HHHHHHHHHHHHHHCSSCGGGCC----TTCTTHHHHHHHHHHHHHHTTCSEEEEECCSTTHHHHHHHTTCCCHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHhcCCcccC----CChHHHHHHHHHHHHHhhhCCCCCEEEeccccchHHHHHHHhCCCHHHHHHHh
Confidence 78999999999999999999875 999999999987754 7899997 8999999999 999999999999
Q ss_pred hCCCCCC-CcC-CCCccccccCC------------CcccccccccccchHHHHHHHHHHHHhhhhhh---ccCCCcEEEE
Q 019523 72 FGKATGC-CRG-QGGSMHMFSKE------------HNLLGGFAFIGEGIPVATGAAFTSKYRREVLK---EADCDHVTLA 134 (339)
Q Consensus 72 ~~~~~~~-~~g-~~G~~h~~~~~------------~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~---~~~~~~~vv~ 134 (339)
+++..+. +.| .+.++|+.... .++.+..++||+++|+|+|+|+|.++++...+ ....+.++||
T Consensus 203 ~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~s~Lg~~~P~A~G~A~A~k~~~~~~~~~~~~~~~~~vv~ 282 (868)
T 2yic_A 203 EGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLM 282 (868)
T ss_dssp C------------CGGGTCCEEEEEECSSSSCEEEEEECCCCSSTTTTHHHHHHHHHHHHHHHTCSTTSSSCSCCEEEEE
T ss_pred cCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCCccccccccHHHHHHHHHHhhccCCcccccccCCceEEE
Confidence 9998765 333 33367875432 23456789999999999999999887642100 0015679999
Q ss_pred EeCCCCc-ccchHHHHHHHHHhCCCC---EEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCCCHHHHHHHH
Q 019523 135 FFGDGTC-NNGQFFECLNMAALWKLP---IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVA 210 (339)
Q Consensus 135 ~~GDG~~-~~g~~~eal~~A~~~~Lp---vi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~ 210 (339)
++|||++ ++|.|+|+||+|+.|+|| +||||+||+|+++++...+++.+++.+++++||+++++|||+|+++|++++
T Consensus 283 ~~GDGa~~~eG~v~Ealn~A~~~~lp~g~vi~iv~NN~~g~st~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~ 362 (868)
T 2yic_A 283 LHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWVA 362 (868)
T ss_dssp EEEHHHHHHCHHHHHHHTTTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHHHHH
T ss_pred EECCcccccccHHHHHHHHHHhcCCCCCCeEEEEEcCCcccccCccccccccCHHHHHHhCCCcEEEEeCCCHHHHHHHH
Confidence 9999996 799999999999999999 999999999999997665556678889999999999999999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEEEeeCCCCCCCCCCCCCCHHHHHHHhh-CChHHHHHHHHHHcCcccHHHHHHHHHHHHHHHH
Q 019523 211 KEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYAA-RDPITALKKYLIESSLASEAELKAIEKKIDEVVE 289 (339)
Q Consensus 211 ~~A~~~ar~~~gP~lIev~t~r~~gh~~~D~~~yr~~~e~~~~~~-~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~ 289 (339)
+.|++++|++++|+|||++|||++||+++|++.||.+.+++.|++ +||+.+|+++|+++|+++++++++++++++++++
T Consensus 363 ~~A~~~ar~~~~PvlIe~~tyR~~GHs~~D~p~~~~p~~~~~~~~~~dPi~~~~~~L~~~G~~t~ee~~~i~~e~~~~v~ 442 (868)
T 2yic_A 363 RLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPSMTQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQGQLE 442 (868)
T ss_dssp HHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGGGTCHHHHHHHTTCCCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEEEeecCCCcCcccccccCChHHHHHHHhCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998875 7999999999999999999999999999999999
Q ss_pred HHHHHhhh
Q 019523 290 DAVEFADE 297 (339)
Q Consensus 290 ~a~~~a~~ 297 (339)
+++++|++
T Consensus 443 ~a~~~a~~ 450 (868)
T 2yic_A 443 RVFNEVRE 450 (868)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999887
No 7
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=4.6e-52 Score=445.89 Aligned_cols=294 Identities=21% Similarity=0.241 Sum_probs=252.5
Q ss_pred CchhHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHcc------CCCCeeee-CCCCcccccc--cCCCHHHHHHHh
Q 019523 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLL------KKEDSVVS-TYRDHVHALS--KGVPARAVMSEL 71 (339)
Q Consensus 1 m~~~R~~e~~~~~~~~~g~~~g~~~~~~G~Ea~~~~~~~~l------~~~D~i~~-~~R~~~~~l~--~g~~p~~~~~el 71 (339)
|+++|.||+++..+|++||++|+ .||||+++|++.+| +++|++++ +||+|++.|+ +|+++.++|+|+
T Consensus 372 m~~~r~fE~~l~~~~~~~k~~g~----~GqEa~~~g~~~~l~~~~~l~~~D~v~gm~hRg~~~~La~~~G~~~~~i~ae~ 447 (1113)
T 2xt6_A 372 LNAAEAFETFLQTKYVGQKRFSL----EGAETVIPMMDAVIDQCAEHGLDEVVIAMPHRGRLNVLANIVGKPYSQIFSEF 447 (1113)
T ss_dssp HHHHHHHHHHHHHHCSSCGGGCC----TTCTTHHHHHHHHHHHHHHTTCSEEEEECCSTTHHHHHHHTTCCCHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHhcCCcccC----CChHHHHHHHHHHHHHhhhCCCCCEEEeccccchHHHHHHHhCCCHHHHHHHh
Confidence 78999999999999999999876 99999999998875 47899997 8999999999 999999999999
Q ss_pred hCCCCCC-CcC-CCCccccccCC------------CcccccccccccchHHHHHHHHHHHHhhhhhh---ccCCCcEEEE
Q 019523 72 FGKATGC-CRG-QGGSMHMFSKE------------HNLLGGFAFIGEGIPVATGAAFTSKYRREVLK---EADCDHVTLA 134 (339)
Q Consensus 72 ~~~~~~~-~~g-~~G~~h~~~~~------------~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~---~~~~~~~vv~ 134 (339)
+++..+. +.| .+.++|+.... .++.+.+|+||+++|+|+|+|+|.|+++...+ ....+.++||
T Consensus 448 ~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~s~Lg~~~p~A~G~A~A~k~~~~~~~~~~~~~~~~~~v~ 527 (1113)
T 2xt6_A 448 EGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLM 527 (1113)
T ss_dssp -------------CGGGTCCEEEEEECSSSSCEEEEEECCCCSSTTTTHHHHHHHHHHHHHHTTBSTTSSBSCCCEEEEE
T ss_pred cCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCCccccccccHHHHHHHHHHHhccccCccccccCCcEEEE
Confidence 9998765 333 23367875432 23456789999999999999999988642110 0115689999
Q ss_pred EeCCCCc-ccchHHHHHHHHHhCCCC---EEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCCCHHHHHHHH
Q 019523 135 FFGDGTC-NNGQFFECLNMAALWKLP---IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVA 210 (339)
Q Consensus 135 ~~GDG~~-~~g~~~eal~~A~~~~Lp---vi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~ 210 (339)
++|||++ ++|.|+|+||+|+.|+|| +||||+||+|+++++...+++.+++.+++++|||++++|||+|+++|++++
T Consensus 528 ~~GDGa~~~eG~~~Ealn~A~~~~lp~g~vi~iv~NN~~gist~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~ 607 (1113)
T 2xt6_A 528 LHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWVA 607 (1113)
T ss_dssp EEEHHHHHHCTHHHHHHTTTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHHHHH
T ss_pred EECCcccccccHHHHHHHHHhhcCCCCCCeEEEEEeCCcccccCccccccccCHHHHHHhcCCcEEEEcCCCHHHHHHHH
Confidence 9999996 899999999999999999 999999999999997655555667889999999999999999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEEEeeCCCCCCCCCCCCCCHHHHHHHhh-CChHHHHHHHHHHcCcccHHHHHHHHHHHHHHHH
Q 019523 211 KEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYAA-RDPITALKKYLIESSLASEAELKAIEKKIDEVVE 289 (339)
Q Consensus 211 ~~A~~~ar~~~gP~lIev~t~r~~gh~~~D~~~yr~~~e~~~~~~-~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~ 289 (339)
+.|+++++++++|+|||+.|||++||+++|++.||.+.+++.|++ +||+.+|+++|+++|+++++++++++++++++++
T Consensus 608 ~~A~~~~r~~~~PvlIe~~tyR~~GHs~~D~p~~~~~~~~~~~~~~~dpi~~~~~~L~~~G~~t~ee~~~i~~e~~~~v~ 687 (1113)
T 2xt6_A 608 RLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPSMTQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQGQLE 687 (1113)
T ss_dssp HHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGGGTCHHHHHHHTTCCCHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEEeEccCCcCCCCccccCChHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998875 7999999999999999999999999999999999
Q ss_pred HHHHHhhhC
Q 019523 290 DAVEFADES 298 (339)
Q Consensus 290 ~a~~~a~~~ 298 (339)
+++++|++.
T Consensus 688 ~a~~~a~~~ 696 (1113)
T 2xt6_A 688 RVFNEVREL 696 (1113)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999999873
No 8
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=3.5e-51 Score=431.85 Aligned_cols=291 Identities=19% Similarity=0.213 Sum_probs=235.0
Q ss_pred CchhHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHccC------CCCeeee-CCCCcccccc--cCCCHHHHHHHh
Q 019523 1 MILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK------KEDSVVS-TYRDHVHALS--KGVPARAVMSEL 71 (339)
Q Consensus 1 m~~~R~~e~~~~~~~~~g~~~g~~~~~~G~Ea~~~~~~~~l~------~~D~i~~-~~R~~~~~l~--~g~~p~~~~~el 71 (339)
|+++|.||+++..+|++||++| +.|||++++|+..+++ .+|+|++ +||+|++.|+ +|+++.++|+|+
T Consensus 207 m~~~r~fE~~l~~~~~~gkrf~----~~G~Ea~i~g~~~~~~~a~~~g~~D~v~g~~hRg~~~~Lan~~G~~~~~i~~e~ 282 (933)
T 2jgd_A 207 LTAAEGLERYLGAKFPGAKRFS----LEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEF 282 (933)
T ss_dssp HHHHHHHHHHHHHHCCC--CCC----CTTCTTHHHHHHHHHHHHHTTTCCEEEEECCSTTHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCccc----CCCchHHHHHHHHHHHHHhhCCCCCEEecCCCcCHHHHHHHHhCCCHHHHHHHh
Confidence 7899999999999999999765 4899999999877775 5899995 8999999999 999999999999
Q ss_pred hCCCCCCCcCCCCccccccCCC----------cccccccccccchHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCc
Q 019523 72 FGKATGCCRGQGGSMHMFSKEH----------NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTC 141 (339)
Q Consensus 72 ~~~~~~~~~g~~G~~h~~~~~~----------~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~ 141 (339)
+++.++.+.+...++|+..... ++....+++|.++|+|+|+|+|.++++.. ..+.+.++||++|||++
T Consensus 283 ~G~~~g~~g~gdv~~Hlg~~~~~~~~gg~~~l~l~~~~shlg~~~p~A~G~A~A~~~~~~~--~~~~~~~vv~v~GDGa~ 360 (933)
T 2jgd_A 283 AGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDE--PSSNKVLPITIHGDAAV 360 (933)
T ss_dssp HTCC--CCSCCCCGGGCCEEEEEEETTEEEEEEECCCCSSTTCHHHHHHHHHHHHHTTSSS--CCGGGEEEEEEEEHHHH
T ss_pred cCCCCCCCCCCCccccCCcccccccCCCceEEeecccCcccccccCHHHHHHHHHHhhccc--cCCCCeEEEEEECCccc
Confidence 9998776544455678764431 23467789999999999999998876310 01246799999999998
Q ss_pred -ccchHHHHHHHHHhCCCC---EEEEEEcCCeeecc-cccccccChhhhhhcccCCCcEEEecCCCHHHHHHHHHHHHHH
Q 019523 142 -NNGQFFECLNMAALWKLP---IVFVVENNLWAIGM-SHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIER 216 (339)
Q Consensus 142 -~~g~~~eal~~A~~~~Lp---vi~vv~NN~~~i~~-~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ 216 (339)
++|.++|+||+|+.+++| +|+||+||+|+|++ +...+...+++++++++||+++++|||+|+++|+++++.|+++
T Consensus 361 a~qG~~~Ealn~A~~~~lp~gg~I~vv~nN~~~ist~~~~~~~~~~~~~~~a~a~g~p~~~VdG~D~~av~~a~~~A~e~ 440 (933)
T 2jgd_A 361 TGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDF 440 (933)
T ss_dssp HHCTHHHHHHHHTTSTTTCCSCCEEEEEECC---------------CGGGGGGTTTCCEEEEETTCHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHhhccCCCCCceEEEEEeCCccccCCCHHhcccchhHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHH
Confidence 899999999999999999 99999999999999 7777777788999999999999999999999999999999999
Q ss_pred HHcCCCCEEEEEEEeeCCCCCCCCCCCCCCHHHHHHHhh-CChHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHh
Q 019523 217 ARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYAA-RDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFA 295 (339)
Q Consensus 217 ar~~~gP~lIev~t~r~~gh~~~D~~~yr~~~e~~~~~~-~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a 295 (339)
++.+++|+|||+.|||+.||+++|++.||+++|++.|++ +||+.+|+++|+++|++|++++++++++++++++++++.|
T Consensus 441 ~r~~~~P~lIe~~tyR~~GH~~~D~~~yr~~~e~~~~~~~~dPi~~~~~~Li~~Gv~t~~~~~~i~~~~~~~v~~a~~~A 520 (933)
T 2jgd_A 441 RNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVV 520 (933)
T ss_dssp HHHHCCCEEEEEECCCCC-----------CCTTHHHHHTSCCHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHhcCCCEEEEEeeeeecCcCcccchhhCCHHHHHHHHccCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999989999999999998 5999999999999999999999999999999999999988
Q ss_pred hh
Q 019523 296 DE 297 (339)
Q Consensus 296 ~~ 297 (339)
++
T Consensus 521 ~~ 522 (933)
T 2jgd_A 521 AE 522 (933)
T ss_dssp TT
T ss_pred Hh
Confidence 87
No 9
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=99.96 E-value=2.1e-28 Score=251.14 Aligned_cols=211 Identities=18% Similarity=0.200 Sum_probs=153.6
Q ss_pred HHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHccC-CCCeee--eCCCCcccccccCCCHHHHHHHhhCCCCCCCcC
Q 019523 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK-KEDSVV--STYRDHVHALSKGVPARAVMSELFGKATGCCRG 81 (339)
Q Consensus 5 R~~e~~~~~~~~~g~~~g~~~~~~G~Ea~~~~~~~~l~-~~D~i~--~~~R~~~~~l~~g~~p~~~~~el~~~~~~~~~g 81 (339)
+.+...+.++. ++..|+++++.|++++.+++...++ +.|+++ ..||++++.+..|. . .++. .. ..
T Consensus 33 ~~iR~~~~~~~--~~~~Gh~~~~lg~~~~~~~l~~~~~~~~D~~v~~~gH~~y~~~~l~G~-~----~~~~-~~----r~ 100 (621)
T 2o1s_A 33 DELRRYLLDSV--SRSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGR-R----DKIG-TI----RQ 100 (621)
T ss_dssp HHHHHHHHHHS--CGGGCTHHHHHTTHHHHHHHHHHSCTTTSEEEESSSTTCHHHHHTTTT-G----GGGG-GT----TS
T ss_pred HHHHHHHHHHH--hhcCCCcCCChhHHHHHHHHHhccCCCCCEEEEeCchHHHHHHHHhCC-H----hhhh-cc----cc
Confidence 33333344443 3568999999999999999999999 889988 67999999888886 1 1121 11 11
Q ss_pred CCCccccccC---CCcccccccccccchHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCC
Q 019523 82 QGGSMHMFSK---EHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKL 158 (339)
Q Consensus 82 ~~G~~h~~~~---~~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~L 158 (339)
.+|..+...+ +.. ..++|+||+++|+|+|+|+|.+++ +++++|||++|||++++|+++|+|++|+++++
T Consensus 101 ~~g~~g~~~~~~s~~~-~~~~G~~G~gl~~A~G~AlA~~~~-------~~~~~Vv~v~GDG~~~~G~~~EaL~~A~~~~~ 172 (621)
T 2o1s_A 101 KGGLHPFPWRGESEYD-VLSVGHSSTSISAGIGIAVAAEKE-------GKNRRTVCVIGDGAITAGMAFEAMNHAGDIRP 172 (621)
T ss_dssp TTSCCSSCCTTTCTTC-CSCCSSSSCHHHHHHHHHHHHHHH-------TSCCCEEEEEETTGGGSHHHHHHHHHHHHHCC
T ss_pred cCCCCCCCCCCCCCCC-ccCCcccchHHHHHHHHHHHHHHh-------CCCCeEEEEEchhhhhccHHHHHHHHHHhhCC
Confidence 1221111111 223 335899999999999999998887 57899999999999999999999999999999
Q ss_pred CEEEEEEcCCeeecccccccccC----------------------------------hhh-------hhhcccCCCcEE-
Q 019523 159 PIVFVVENNLWAIGMSHLRATSD----------------------------------PQI-------YKKGPAFGMPGF- 196 (339)
Q Consensus 159 pvi~vv~NN~~~i~~~~~~~~~~----------------------------------~d~-------~~~a~a~G~~~~- 196 (339)
|+|+||+||+|+++.+.+.+... .++ ..++++||++++
T Consensus 173 pli~vvnnN~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~p~~~~~~~r~~~~~~~~~~p~~~~ea~G~~~~g 252 (621)
T 2o1s_A 173 DMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIG 252 (621)
T ss_dssp SEEEEEEECC--------------------------------------------------------CHHHHHHTTCEEEE
T ss_pred CEEEEEeCCCcccCCCcchHHHHHHhhhcchhHHHHHHHHHHHHhccchHHHHHHHHHHHhhhccChhhHHHHCCCeEee
Confidence 99999999999988765432100 011 478899999999
Q ss_pred EecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCC
Q 019523 197 HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA 239 (339)
Q Consensus 197 ~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~ 239 (339)
+|||+|+.++.+++++ +++.++|+||+++|+|++||+..
T Consensus 253 ~vdG~d~~~l~~al~~----A~~~~gP~lI~v~t~kg~G~~~~ 291 (621)
T 2o1s_A 253 PVDGHDVLGLITTLKN----MRDLKGPQFLHIMTKKGRGYEPA 291 (621)
T ss_dssp EEETTCHHHHHHHHHH----HHHSCSEEEEEEECCCTTCCCCC
T ss_pred eeCCCCHHHHHHHHHH----HHHcCCCEEEEEEEecccCCChh
Confidence 9999999988775554 45568999999999999999854
No 10
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=99.95 E-value=1.5e-27 Score=245.16 Aligned_cols=211 Identities=18% Similarity=0.151 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHccC-CCCeeeeCCCCccc---ccccCC-CHHHHHHHhhCCCCCCC
Q 019523 5 RSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK-KEDSVVSTYRDHVH---ALSKGV-PARAVMSELFGKATGCC 79 (339)
Q Consensus 5 R~~e~~~~~~~~~g~~~g~~~~~~G~Ea~~~~~~~~l~-~~D~i~~~~R~~~~---~l~~g~-~p~~~~~el~~~~~~~~ 79 (339)
|.+-+++.+++. +..|+++++.|+-.+..++...++ ++|+++.+ |+|+. .+..|. +....++++.+. ++..
T Consensus 35 ~~iR~~~~~~~~--~~~Gh~~~~lg~v~l~~aL~~~~~~~~D~~v~~-~GH~~y~~~~l~G~~~~~~~~r~~~g~-~G~p 110 (629)
T 2o1x_A 35 EELRGEIVRVCS--RGGLHLASSLGAVDIITALHYVLDSPRDRILFD-VGHQAYAHKILTGRRDQMADIKKEGGI-SGFT 110 (629)
T ss_dssp HHHHHHHHHHHT--TSSSCHHHHHHTHHHHHHHHHHSCTTTSEEEES-SSTTCHHHHHTTTTGGGGGGTTSTTSC-CSSC
T ss_pred HHHHHHHHHHHH--hcCCcCCCchhHHHHHHHHHhhcCCCCCeEEec-CchHHHHHHHHhCcHhHHhCcccCCCC-CCCC
Confidence 333344444444 367999999999777666666668 88999888 99974 444554 222223333331 1211
Q ss_pred cCCCCccccccCCCcccccccccccchHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCC
Q 019523 80 RGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP 159 (339)
Q Consensus 80 ~g~~G~~h~~~~~~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp 159 (339)
.+. +++ ....++|+||+++|+|+|+|+|.+++ +++++|||++|||++++|+++|+|++|+++++|
T Consensus 111 ~~~-~s~-------~~~~~~G~~G~gl~~AvG~AlA~k~~-------~~~~~Vv~v~GDG~~~~G~~~EaL~~A~~~~~p 175 (629)
T 2o1x_A 111 KVS-ESE-------HDAITVGHASTSLTNALGMALARDAQ-------GKDFHVAAVIGDGSLTGGMALAALNTIGDMGRK 175 (629)
T ss_dssp CGG-GCT-------TCCSCCSSSSCHHHHHHHHHHHHHHH-------TCCCCEEEEEETTGGGSHHHHHHHHHHHHHCCS
T ss_pred CCC-CCC-------CCCcCCCcccccHhHHHHHHHHHHHh-------CCCCeEEEEEchhhhhccHHHHHHHHHHhhCCC
Confidence 111 111 23567899999999999999998887 578999999999999999999999999999999
Q ss_pred EEEEEEcCCeeeccccccccc--------------------------C---------hhh-------h--hhcccCCCcE
Q 019523 160 IVFVVENNLWAIGMSHLRATS--------------------------D---------PQI-------Y--KKGPAFGMPG 195 (339)
Q Consensus 160 vi~vv~NN~~~i~~~~~~~~~--------------------------~---------~d~-------~--~~a~a~G~~~ 195 (339)
+|+||+||+|+++.+...+.. . +++ . +++++||+++
T Consensus 176 li~IvnnN~~~i~~~~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~~~~~p~~~~~~ea~G~~~ 255 (629)
T 2o1x_A 176 MLIVLNDNEMSISENVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAKNSTRHFFDPASVNPFAAMGVRY 255 (629)
T ss_dssp EEEEEEECSBSSSBCCSSHHHHC---------------------------------------------CCCTTGGGTCEE
T ss_pred EEEEEECCCCCCCCChhHHHHHHHHHhhchhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHhhcCcccchHHHhcCCeE
Confidence 999999999998775542100 0 132 3 8899999999
Q ss_pred E-EecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCC
Q 019523 196 F-HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSL 238 (339)
Q Consensus 196 ~-~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~ 238 (339)
+ +|||+|+.++.+++ +.+++.++|+||+++|++++|++.
T Consensus 256 ~g~vdG~d~~~l~~al----~~A~~~~~P~lI~v~t~kg~G~~~ 295 (629)
T 2o1x_A 256 VGPVDGHNVQELVWLL----ERLVDLDGPTILHIVTTKGKGLSY 295 (629)
T ss_dssp EEEEESSCHHHHHHHH----HHHTTSSSEEEEEEECCTTTTCHH
T ss_pred EeeECCcCHHHHHHHH----HHHHhcCCCEEEEEEEecCCCCCh
Confidence 9 99999999887754 555667899999999999999973
No 11
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=99.94 E-value=1.8e-26 Score=238.54 Aligned_cols=163 Identities=20% Similarity=0.223 Sum_probs=139.5
Q ss_pred CcccccccccccchHHHHHHHHHHHHhhhhhhccC---CCcEEEEEeCCCCcccchHHHHHHHHHhCCCC-EEEEEEcCC
Q 019523 93 HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNL 168 (339)
Q Consensus 93 ~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~---~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp-vi~vv~NN~ 168 (339)
.++...+|+||+++|.|+|+|+|.+++++.++..+ .+++|||++|||++++|+++|+|++|++++|| +|+||+||+
T Consensus 109 ~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~vv~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~ 188 (680)
T 1gpu_A 109 PGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIAIYDDNK 188 (680)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECS
T ss_pred CCeeeccccccchHHHHHHHHHHHHHhccccccCccCCCCCeEEEEECCCccchhhHHHHHHHHHHhCCCcEEEEEECCC
Confidence 45677889999999999999999988764443322 37899999999999999999999999999999 999999999
Q ss_pred eeecccccccccChhhhhhcccCCCcEE-EecCC-CHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCCCC----C
Q 019523 169 WAIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGM-DVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP----D 242 (339)
Q Consensus 169 ~~i~~~~~~~~~~~d~~~~a~a~G~~~~-~Vdg~-d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~D~----~ 242 (339)
|+++.+...+ ..+++.+++++|||+++ +|||+ |+.++++++++|.+ ..++|+||+++|+|++||+..|+ .
T Consensus 189 ~~i~~~~~~~-~~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~A~~---~~~~P~lI~~~T~kg~G~~~~~~~~~H~ 264 (680)
T 1gpu_A 189 ITIDGATSIS-FDEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKL---SKDKPTLIKMTTTIGYGSLHAGSHSVHG 264 (680)
T ss_dssp EETTEEGGGT-CCCCHHHHHHHHTCEEEEESCTTTCHHHHHHHHHHHHH---CTTSCEEEEEECCTTTTSTTTTSGGGSS
T ss_pred ceEecccccc-cCccHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH---CCCCCEEEEEEeecccccccCCCCccCC
Confidence 9998876644 36789999999999999 99999 99998887666543 36899999999999999997775 5
Q ss_pred CCCCHHHHHHHhhCChH
Q 019523 243 ELRDPAEKARYAARDPI 259 (339)
Q Consensus 243 ~yr~~~e~~~~~~~dPl 259 (339)
.||+++|++.|++++++
T Consensus 265 ~~~~~ee~~~~~~~~~~ 281 (680)
T 1gpu_A 265 APLKADDVKQLKSKFGF 281 (680)
T ss_dssp SCCCHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHcCC
Confidence 79999999998875544
No 12
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=99.94 E-value=3.9e-27 Score=242.61 Aligned_cols=161 Identities=20% Similarity=0.211 Sum_probs=138.6
Q ss_pred cccccccccccchHHHHHHHHHHHHhhhhhhccC---CCcEEEEEeCCCCcccchHHHHHHHHHhCCCC-EEEEEEcCCe
Q 019523 94 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLW 169 (339)
Q Consensus 94 ~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~---~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp-vi~vv~NN~~ 169 (339)
++...+|+||+++|.|+|+|+|.++++++++..+ ++++|||++|||++++|+++|+|++|++++|| +|+||+||+|
T Consensus 112 g~~~~~G~lG~gl~~AvG~A~A~~~~~~~~~~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~ 191 (651)
T 2e6k_A 112 GVEVTTGPLGQGISTAVGLALAERKLAAEFNRPGHVVVDHYTYVLASDGDLMEGVSGEAASLAGHWGLSKLIVFWDDNRI 191 (651)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECCE
T ss_pred CeeeccccccchHHHHHHHHHHHHhhcccccccccCCCCCEEEEEEChhhhchhHHHHHHHHHHHcCCCeEEEEEECCCc
Confidence 5667889999999999999999988765554332 57899999999999999999999999999999 9999999999
Q ss_pred eecccccccccChhhhhhcccCCCcEE-EecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCCCCCCC----
Q 019523 170 AIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDEL---- 244 (339)
Q Consensus 170 ~i~~~~~~~~~~~d~~~~a~a~G~~~~-~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~D~~~y---- 244 (339)
+++.+..... .+++.+++++|||+++ +|||+|+.++++++++|. +.++|+||+++|+|++||+..|+..|
T Consensus 192 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~----~~~~P~lI~~~t~kg~G~~~~~~~~~H~~~ 266 (651)
T 2e6k_A 192 SIDGPTDLAF-TEDVLARYRAYGWQTLRVEDVNDLEALRKAIKLAK----LDERPTLIAVRSHIGFGSPKQDSAKAHGEP 266 (651)
T ss_dssp ETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTCHHHHHHHHHHHH----HSSSCEEEEEECCTTTTSTTTTSGGGTSSC
T ss_pred cccccccccc-CccHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHH----HCCCCEEEEEEeEecccccccccccccccC
Confidence 9988766554 6789999999999999 999999999888666554 47899999999999999996666555
Q ss_pred CCHHHHHHHhhCChH
Q 019523 245 RDPAEKARYAARDPI 259 (339)
Q Consensus 245 r~~~e~~~~~~~dPl 259 (339)
++++|++.|++++|+
T Consensus 267 ~~~~e~~~~~~~~~~ 281 (651)
T 2e6k_A 267 LGPEAVEATRRNLGW 281 (651)
T ss_dssp CHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHcCC
Confidence 577888888877665
No 13
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.93 E-value=4e-25 Score=228.24 Aligned_cols=159 Identities=22% Similarity=0.222 Sum_probs=136.1
Q ss_pred cccccccccccchHHHHHHHHHHHHhhhhhhccC---CCcEEEEEeCCCCcccchHHHHHHHHHhCCCC-EEEEEEcCCe
Q 019523 94 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLW 169 (339)
Q Consensus 94 ~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~---~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp-vi~vv~NN~~ 169 (339)
++...+|+||+++|.|+|+|+|.++++++++..+ .+++|||++|||++++|+++|+|++|++++|| +|+||+||+|
T Consensus 110 gv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~g~~~~d~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~d~N~~ 189 (673)
T 1r9j_A 110 GVEVTTGPLGQGIANAVGLAIAEAHLAATFNRPGYNIVDHYTYVYCGDGCLMEGVCQEALSLAGHLALEKLIVIYDSNYI 189 (673)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECSB
T ss_pred CeeeccCCCCCcHHHHHHHHHHHHHhhhhccccccCCCCCEEEEEECcchhcccHHHHHHHHHHHhCCCcEEEEEECCCC
Confidence 5667889999999999999999998876664433 57899999999999999999999999999998 9999999999
Q ss_pred eecccccccccChhhhhhcccCCCcEE-EecC-CCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCCCC----CC
Q 019523 170 AIGMSHLRATSDPQIYKKGPAFGMPGF-HVDG-MDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP----DE 243 (339)
Q Consensus 170 ~i~~~~~~~~~~~d~~~~a~a~G~~~~-~Vdg-~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~D~----~~ 243 (339)
+|+.+...+. ..++.+++++|||+++ +||| +|+.++++++++|.+ ..++|+||+++|+|++||+..+. ..
T Consensus 190 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~Al~~A~~---~~~~P~lI~~~T~kg~G~~~~~~~~~H~~ 265 (673)
T 1r9j_A 190 SIDGSTSLSF-TEQCHQKYVAMGFHVIEVKNGDTDYEGLRKALAEAKA---TKGKPKMIVQTTTIGFGSSKQGTEKVHGA 265 (673)
T ss_dssp CSSSBGGGTC-CCCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTSTTTTSGGGTSS
T ss_pred ccccchhhcc-CHhHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHHHHH---cCCCCEEEEEecccccccccCCCcccccC
Confidence 9988777664 6789999999999999 9999 999999887665543 37899999999999999995554 34
Q ss_pred CCCHHHHHHHhhC
Q 019523 244 LRDPAEKARYAAR 256 (339)
Q Consensus 244 yr~~~e~~~~~~~ 256 (339)
+++++|++.++++
T Consensus 266 ~~~~ee~~~~~~~ 278 (673)
T 1r9j_A 266 PLGEEDIANIKAK 278 (673)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 5788888877653
No 14
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=99.93 E-value=5.2e-25 Score=227.04 Aligned_cols=144 Identities=20% Similarity=0.216 Sum_probs=125.4
Q ss_pred cccccccccccchHHHHHHHHHHHHhhhhhhcc------CCCcEEEEEeCCCCcccchHHHHHHHHHhCCCC-EEEEEEc
Q 019523 94 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEA------DCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVEN 166 (339)
Q Consensus 94 ~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~------~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp-vi~vv~N 166 (339)
++...+|+||+++|.|+|+|+|.|+++++++.. ..+++|+|++|||++++|.++|++++|+.++|| +|+||+|
T Consensus 127 gv~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~~~~v~~~~GDG~l~eG~~~EAl~~A~~~~L~nli~i~d~ 206 (700)
T 3rim_A 127 GVEITTGPLGQGLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDR 206 (700)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTSCTTCSTTCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CccccccccCCcchHHHHHHHHHHHHhhhccccccccccCCCCeEEEEECCcccccChHHHHHHHHHHcCCCcEEEEEEC
Confidence 566788999999999999999999886665442 357899999999999999999999999999998 9999999
Q ss_pred CCeeecccccccccChhhhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCCCC
Q 019523 167 NLWAIGMSHLRATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP 241 (339)
Q Consensus 167 N~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~D~ 241 (339)
|+|+|+.+.... ...++.+++++|||++++| ||+|+.+|++++++|.+ ..++|+||+++|+|++||+..+.
T Consensus 207 N~~si~~~~~~~-~~~~~~~~~~a~G~~~~~V~DG~D~~al~~Al~~A~~---~~~~P~lI~~~T~kG~G~~~~e~ 278 (700)
T 3rim_A 207 NQISIEDDTNIA-LCEDTAARYRAYGWHVQEVEGGENVVGIEEAIANAQA---VTDRPSFIALRTVIGYPAPNLMD 278 (700)
T ss_dssp CSEETTEEGGGT-CCCCHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTT
T ss_pred CCcccccchhhc-cchhHHHHHHHcCCeEEEECCCCCHHHHHHHHHHHHH---cCCCCEEEEEEEEeeecCCccCC
Confidence 999999887654 4678999999999999999 99999998886655432 37899999999999999987643
No 15
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=99.93 E-value=2.6e-25 Score=229.65 Aligned_cols=160 Identities=24% Similarity=0.254 Sum_probs=135.9
Q ss_pred CcccccccccccchHHHHHHHHHHHHhhhhhhccC---CCcEEEEEeCCCCcccchHHHHHHHHHhCCCC-EEEEEEcCC
Q 019523 93 HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNL 168 (339)
Q Consensus 93 ~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~---~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp-vi~vv~NN~ 168 (339)
.++..++|+||+++|.|+|+|+|.+++++.++..+ .+++|||++|||++++|+++|+|++|++++|| +|+||+||+
T Consensus 107 ~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~ 186 (669)
T 2r8o_A 107 AGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNG 186 (669)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECS
T ss_pred CCcccccccccchHHHHHHHHHHHHHhccccccCccCCcCCeEEEEECHhHhcchHHHHHHHHHHHcCCCcEEEEEECCC
Confidence 35677889999999999999999988765443322 37899999999999999999999999999999 999999999
Q ss_pred eeecccccccccChhhhhhcccCCCcEE-EecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCC-CCC----C
Q 019523 169 WAIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSL-ADP----D 242 (339)
Q Consensus 169 ~~i~~~~~~~~~~~d~~~~a~a~G~~~~-~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~-~D~----~ 242 (339)
|+|+.+...+ ...++.+++++|||+++ +|||+|+.++++++++|.+ ..++|+||+++|+|++||+. .++ .
T Consensus 187 ~~i~~~~~~~-~~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~---~~~~P~lI~~~T~kg~G~~~~~~~~~~H~ 262 (669)
T 2r8o_A 187 ISIDGHVEGW-FTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARA---VTDKPSLLMCKTIIGFGSPNKAGTHDSHG 262 (669)
T ss_dssp EETTEEGGGT-CCCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSGGGTS
T ss_pred cEeccccccc-cCccHHHHHHHCCCeEEeEECCCCHHHHHHHHHHHHh---cCCCCEEEEEEeEeccCcCCcCCCCcccC
Confidence 9998876644 35789999999999999 9999999998887666543 36899999999999999994 443 5
Q ss_pred CCCCHHHHHHHhhC
Q 019523 243 ELRDPAEKARYAAR 256 (339)
Q Consensus 243 ~yr~~~e~~~~~~~ 256 (339)
.|++++|++.|++.
T Consensus 263 ~~~~~ee~~~~~~~ 276 (669)
T 2r8o_A 263 APLGDAEIALTREQ 276 (669)
T ss_dssp SCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 69999999888653
No 16
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=99.92 E-value=2.9e-26 Score=234.64 Aligned_cols=197 Identities=18% Similarity=0.216 Sum_probs=147.8
Q ss_pred CCCHHHHHHHhhCCCCC--CCcCCCCccccccC-------C--CcccccccccccchHHHHHHHHHHHHhhhhhhccCCC
Q 019523 61 GVPARAVMSELFGKATG--CCRGQGGSMHMFSK-------E--HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCD 129 (339)
Q Consensus 61 g~~p~~~~~el~~~~~~--~~~g~~G~~h~~~~-------~--~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~ 129 (339)
.++|..++..|...+++ .+..+.|++.+|.. + +..+++.++||+++|.|+|++++ .++
T Consensus 370 ~l~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~l~~A~Gaala-----------~~~ 438 (603)
T 4feg_A 370 PLQAYQVLRAVNKIAEPDAIYSIDVGDINLNANRHLKLTPSNRHITSNLFATMGVGIPGAIAAKLN-----------YPE 438 (603)
T ss_dssp BCCHHHHHHHHHHHCCTTCEEEECSSHHHHHHHHHCCCCTTCEEECCCSSCCTTCHHHHHHHHHHH-----------CTT
T ss_pred CcCHHHHHHHHHHhCCCCCEEEECCchHHHHHHHhceeCCCCceecCcccccccchhHHHhhHHHh-----------CCC
Confidence 37888999998887764 35567775433321 1 22355689999999999999999 678
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCC-eeeccc----------ccccccChhhhhhcccCCCcEEEe
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMS----------HLRATSDPQIYKKGPAFGMPGFHV 198 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~-~~i~~~----------~~~~~~~~d~~~~a~a~G~~~~~V 198 (339)
++|||++|||+++++ +++|++|+++++|+++||.||+ |++... .......+|+.+++++||+++++|
T Consensus 439 ~~vv~~~GDG~~~~~--~~~l~~a~~~~lp~~~vv~nN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v 516 (603)
T 4feg_A 439 RQVFNLAGDGGASMT--MQDLATQVQYHLPVINVVFTNCQYGFIKDEQEDTNQNDFIGVEFNDIDFSKIADGVHMQAFRV 516 (603)
T ss_dssp SCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHCSSCCCSSBCCCCCHHHHHHHTTCEEEEE
T ss_pred CcEEEEeccHHHhhh--HHHHHHHHHHCcCeEEEEEECCchHHHHHHHHHhcCCCcccCcCCCCCHHHHHHHCCCeEEEE
Confidence 899999999999998 8999999999999988888885 765211 111224578999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHH--cCCCCEEEEEEEee---CCCCCCCC-CCCCCCHH--HHHHHhhCChHHHHHHHHHHcC
Q 019523 199 DGMDVLKVREVAKEAIERAR--RGEGPTLVECETYR---FRGHSLAD-PDELRDPA--EKARYAARDPITALKKYLIESS 270 (339)
Q Consensus 199 dg~d~~~v~~a~~~A~~~ar--~~~gP~lIev~t~r---~~gh~~~D-~~~yr~~~--e~~~~~~~dPl~~~~~~L~~~g 270 (339)
++.+ ++. +++++++ +.+||+|||+.|++ ..+|...| +..||..+ +..+|.++||+++|+++|.++|
T Consensus 517 ~~~~--~l~----~al~~a~~~~~~gP~lIev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~g 590 (603)
T 4feg_A 517 NKIE--QLP----DVFEQAKAIAQHEPVLIDAVITGDRPLPAEKLRLDSAMSSAADIEAFKQRYEAQDLQPLSTYLKQFG 590 (603)
T ss_dssp CBGG--GHH----HHHHHHHHHTTTSCEEEEEECCCCCCCCTTSCCCCTTTSCHHHHHHHHHHHTCTTCCCHHHHHHHTT
T ss_pred CCHH--HHH----HHHHHHHHhcCCCcEEEEEEeCCCCCCCcccchhhhhhhhHHHHHHHHhhCCcccCCchHHHHHHcC
Confidence 8665 554 4566666 78999999999955 45666654 55676554 5566677999999999999999
Q ss_pred cccHHH
Q 019523 271 LASEAE 276 (339)
Q Consensus 271 ~~~~~~ 276 (339)
++++++
T Consensus 591 ~~~~~~ 596 (603)
T 4feg_A 591 LDDLQH 596 (603)
T ss_dssp C-----
T ss_pred Cchhhh
Confidence 998665
No 17
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.91 E-value=5e-24 Score=220.19 Aligned_cols=158 Identities=22% Similarity=0.225 Sum_probs=131.3
Q ss_pred cccccccccccchHHHHHHHHHHHHhhhhhhccC---CCcEEEEEeCCCCcccchHHHHHHHHHhCCCC-EEEEEEcCCe
Q 019523 94 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLW 169 (339)
Q Consensus 94 ~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~---~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp-vi~vv~NN~~ 169 (339)
++...+|+||+++|+|+|+|+|.++++++++..+ ++++|||++|||++++|+++|+|++|++++|| +|+||+||+|
T Consensus 121 ~~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~ 200 (675)
T 1itz_A 121 GVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDSEIVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHI 200 (675)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSE
T ss_pred CeeECCccHHhHHHHHHHHHHHhhhhcccccccccCCCCCEEEEEECHhHhchhHHHHHHHHHHHhCCCcEEEEEECCCc
Confidence 4567789999999999999999988765554322 68899999999999999999999999999995 9999999999
Q ss_pred eecccccccccChhhhhhcccCCCcEE-EecCC-CHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCCC-CC----
Q 019523 170 AIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGM-DVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD-PD---- 242 (339)
Q Consensus 170 ~i~~~~~~~~~~~d~~~~a~a~G~~~~-~Vdg~-d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~D-~~---- 242 (339)
+|+.+..... .+++.+++++|||+++ +|||+ |+.++++++++|.+ ..++|+||+++|++++||+..+ +.
T Consensus 201 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~a~~---~~~~P~lI~~~T~kg~G~~~~~~~~~~H~ 276 (675)
T 1itz_A 201 SIDGDTEIAF-TEDVSTRFEALGWHTIWVKNGNTGYDDIRAAIKEAKA---VTDKPTLIKVTTTIGFGSPNKANSYSVHG 276 (675)
T ss_dssp ETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSGGGTS
T ss_pred cCCCChhhhc-ChhHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHH---CCCCeEEEEEeeecccCcccccCcccccC
Confidence 9988766543 6899999999999999 99999 99998876655432 2689999999999999998643 32
Q ss_pred CCCCHHHHHHHhh
Q 019523 243 ELRDPAEKARYAA 255 (339)
Q Consensus 243 ~yr~~~e~~~~~~ 255 (339)
.+.+.++++.+++
T Consensus 277 ~~~~~e~~~~~~~ 289 (675)
T 1itz_A 277 SALGAKEVEATRQ 289 (675)
T ss_dssp SCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 3456777766544
No 18
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=99.91 E-value=3.9e-24 Score=218.78 Aligned_cols=143 Identities=22% Similarity=0.316 Sum_probs=123.9
Q ss_pred CcccccccccccchHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCC-EEEEEEcCCeee
Q 019523 93 HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLWAI 171 (339)
Q Consensus 93 ~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp-vi~vv~NN~~~i 171 (339)
.++...+|+||+++|+|+|+|+|.++++..++....+++|||++|||++++|+++|+|++|++++|| +|+|++||+|+|
T Consensus 107 ~g~~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v~GDG~~~eG~~~Eal~~A~~~~L~~livi~nnN~~~i 186 (632)
T 3l84_A 107 LGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGISYEACSLAGLHKLDNFILIYDSNNISI 186 (632)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTTCCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEET
T ss_pred CCcccCCcchhhHHHHHHHHHHHHHhhccccccCCCCCeEEEEECCcchhhccHHHHHHHHHHcCCCcEEEEEECCCccc
Confidence 3566778999999999999999999876555434458899999999999999999999999999998 999999999999
Q ss_pred cccccccccChhhhhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCCC
Q 019523 172 GMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240 (339)
Q Consensus 172 ~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~D 240 (339)
+.+.... ..+++.+++++|||++++|||+|+.++.+ |++.+++.++|+||+++|++++||+..+
T Consensus 187 ~~~~~~~-~~~d~~~~~~a~G~~~~~vdGhd~~~l~~----al~~A~~~~~P~lI~v~T~kG~G~~~~e 250 (632)
T 3l84_A 187 EGDVGLA-FNENVKMRFEAQGFEVLSINGHDYEEINK----ALEQAKKSTKPCLIIAKTTIAKGAGELE 250 (632)
T ss_dssp TEEGGGT-CCCCHHHHHHHTTCEEEEEETTCHHHHHH----HHHHHHTCSSCEEEEEECCTTTTCGGGT
T ss_pred ccchhhh-cChhHHHHHHHcCCeEEEEeeCCHHHHHH----HHHHHHhCCCCEEEEEeeEeeecCCCCC
Confidence 8776544 46789999999999999999999998877 4555667889999999999999998643
No 19
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=99.91 E-value=1.7e-23 Score=216.25 Aligned_cols=141 Identities=25% Similarity=0.342 Sum_probs=113.8
Q ss_pred cccccccccccchHHHHHHHHHHHHhhhhhhccC---CCcEEEEEeCCCCcccchHHHHHHHHHhCCCC-EEEEEEcCCe
Q 019523 94 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLW 169 (339)
Q Consensus 94 ~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~---~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp-vi~vv~NN~~ 169 (339)
++...+|+||+++|+|+|+|+|.+++++.++..+ .+++|||++|||++++|+++|+|++|++++|| +|+|++||+|
T Consensus 149 gve~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~vv~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~ 228 (711)
T 3uk1_A 149 GVETTTGPLGQGLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGI 228 (711)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSE
T ss_pred CcccCccchhhHHHHHHHHHHHHHhhcccccccccccCCCeEEEEECCcchhhccHHHHHHHHHHhCCCcEEEEEECCCc
Confidence 4556789999999999999999998765443222 37899999999999999999999999999999 9999999999
Q ss_pred eecccccccccChhhhhhcccCCCcEEE-ecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCC
Q 019523 170 AIGMSHLRATSDPQIYKKGPAFGMPGFH-VDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA 239 (339)
Q Consensus 170 ~i~~~~~~~~~~~d~~~~a~a~G~~~~~-Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~ 239 (339)
+++.+...+ ..+|+.+++++|||++++ |||+|+.++.++ ++.+++.++|+||+++|+|++||+..
T Consensus 229 ~i~~~~~~~-~~~d~~~~~~a~G~~~~~~vdG~d~~~l~~A----l~~A~~~~~P~lI~v~T~kG~G~~~~ 294 (711)
T 3uk1_A 229 SIDGDVVNW-FHDDTPKRFEAYGWNVIPNVNGHDVDAIDAA----IAKAKRSDKPSLICCKTRIGNGAATK 294 (711)
T ss_dssp ETTEEGGGT-CCCCHHHHHHHTTCEEEEEEETTCHHHHHHH----HHHHTTCSSCEEEEEEC---------
T ss_pred ccccchhhh-cCCCHHHHHHHcCCcEEEEeCCCCHHHHHHH----HHHHHhCCCCEEEEEccccccCCCCC
Confidence 998776655 467999999999999998 899999988774 45566678999999999999999854
No 20
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=99.90 E-value=4.3e-23 Score=212.79 Aligned_cols=142 Identities=25% Similarity=0.301 Sum_probs=121.3
Q ss_pred cccccccccccchHHHHHHHHHHHHhhhhhhcc---CCCcEEEEEeCCCCcccchHHHHHHHHHhCCCC-EEEEEEcCCe
Q 019523 94 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEA---DCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLW 169 (339)
Q Consensus 94 ~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~---~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp-vi~vv~NN~~ 169 (339)
++...+|+||+++|+|+|+|+|.++++..++.. ..+++|||++|||++++|+++|+|++|++++|| +|+|++||+|
T Consensus 134 gv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~ 213 (690)
T 3m49_A 134 GVDATTGPLGQGIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAICGDGDLMEGVSAEASSLAAHLQLGRLVVLYDSNDI 213 (690)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCSCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSB
T ss_pred ccccCCccccccHHHHHHHHHHHHHhhccccccccccCCCeEEEEECchhhhhccHHHHHHHHHHhCCCeEEEEEECCCe
Confidence 455678999999999999999998876544322 137899999999999999999999999999998 8999999999
Q ss_pred eecccccccccChhhhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHc-CCCCEEEEEEEeeCCCCCCCC
Q 019523 170 AIGMSHLRATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARR-GEGPTLVECETYRFRGHSLAD 240 (339)
Q Consensus 170 ~i~~~~~~~~~~~d~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~-~~gP~lIev~t~r~~gh~~~D 240 (339)
+|+.+.... ..+|+.+++++|||++++| ||+|+.++.++ ++++++ .++|+||+++|+|++|++..+
T Consensus 214 ~i~~~~~~~-~~~d~~~~~~a~G~~~~~v~DG~d~~~l~~A----l~~a~~~~~~P~lI~v~T~kG~G~~~~~ 281 (690)
T 3m49_A 214 SLDGDLNRS-FSESVEDRYKAYGWQVIRVEDGNDIEAIAKA----IEEAKADEKRPTLIEVRTTIGFGSPNKS 281 (690)
T ss_dssp CSSSBGGGT-CCCCHHHHHHHHTCEEEEESCTTCHHHHHHH----HHHHHHCCSSCEEEEEECCTTTTCTTTT
T ss_pred ecccchhhc-cchhHHHHHHHcCCcEEEEecCCCHHHHHHH----HHHHHhcCCCCEEEEEEeecccccCccc
Confidence 998876543 4678999999999999999 99999988774 555666 789999999999999997543
No 21
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=99.90 E-value=1.6e-23 Score=215.35 Aligned_cols=142 Identities=25% Similarity=0.309 Sum_probs=117.2
Q ss_pred cccccccccccchHHHHHHHHHHHHhhhhhhccC---CCcEEEEEeCCCCcccchHHHHHHHHHhCCCC-EEEEEEcCCe
Q 019523 94 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLW 169 (339)
Q Consensus 94 ~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~---~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp-vi~vv~NN~~ 169 (339)
++...+|+||+++|+|+|+|+|.++++..++..+ .+++|||++|||++++|+++|+|++|++++|| +|+|++||+|
T Consensus 110 gve~~tG~lG~gl~~AvG~AlA~~~~~~~~~~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livi~dnN~~ 189 (663)
T 3kom_A 110 GVETTTGPLGQGVANAVGMALGEKLLSDRYNTPDLKVIDHHTYVFLGDGCLMEGVSHEACSLAGTLGLNKLVAFWDDNNI 189 (663)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCSCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECC-
T ss_pred CcccCCcchhhHHHHHHHHHHhHHhhcccccccccccCCCeEEEEECchhhhhchHHHHHHHHHHhCCCeEEEEEECCCc
Confidence 4556789999999999999999988764432211 27899999999999999999999999999999 8999999999
Q ss_pred eecccccccccChhhhhhcccCCCcEE-EecCCCHHHHHHHHHHHHHHHHc-CCCCEEEEEEEeeCCCCCCCC
Q 019523 170 AIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARR-GEGPTLVECETYRFRGHSLAD 240 (339)
Q Consensus 170 ~i~~~~~~~~~~~d~~~~a~a~G~~~~-~Vdg~d~~~v~~a~~~A~~~ar~-~~gP~lIev~t~r~~gh~~~D 240 (339)
+++.+.... ..+++.+++++|||+++ +|||+|+.++.++ ++++++ .++|+||+++|+|++||+..+
T Consensus 190 ~i~~~~~~~-~~~d~~~~~~a~G~~~~~~vdG~d~~~l~~a----l~~A~~~~~~P~lI~~~T~kg~G~~~~e 257 (663)
T 3kom_A 190 SIDGDTKGW-FSDNTPERFRAYGWHVIENVDGHDFVAIEKA----INEAHSQQQKPTLICCKTVIGFGSPEKA 257 (663)
T ss_dssp ----CGGGT-CCCCHHHHHHHTTCEEEEEEETTCHHHHHHH----HHHHHHCSSSCEEEEEECCTTTTCTTTT
T ss_pred ccccchhhh-cchhHHHHHHHCCCeEEEEEcCCCHHHHHHH----HHHHHhcCCCCEEEEEecccccccCCCC
Confidence 998876654 46789999999999999 9999999988775 455566 689999999999999998653
No 22
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=99.90 E-value=2e-23 Score=213.55 Aligned_cols=134 Identities=24% Similarity=0.342 Sum_probs=117.0
Q ss_pred ccccccccccchHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCC-EEEEEEcCCeeecc
Q 019523 95 LLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLWAIGM 173 (339)
Q Consensus 95 ~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp-vi~vv~NN~~~i~~ 173 (339)
+..++|+||+++|+|+|+|+|.++.+ .++++|||++|||++++|+++|+|++|++++|| +++|++||+|+++.
T Consensus 116 ~d~~~G~lG~gl~~A~G~AlA~~~~~------~~~~~vv~v~GDG~~~eG~~~Eal~~A~~~~l~~livi~nnN~~~i~~ 189 (616)
T 3mos_A 116 TDVATGSLGQGLGAACGMAYTGKYFD------KASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSD 189 (616)
T ss_dssp CSSCCCSTTCHHHHHHHHHHHHHHTS------CCSCCEEEEEETGGGGSHHHHHHHHHHHHTTCTTEEEEEEECSBCSSS
T ss_pred ccccccccCCccHHHHHHHHHHHHhC------CCCCEEEEEECccccccCcHHHHHHHHHHcCCCcEEEEEECCCCCCcC
Confidence 44578999999999999999987653 346899999999999999999999999999998 78888999999988
Q ss_pred cccccccChhhhhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCCC
Q 019523 174 SHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 240 (339)
Q Consensus 174 ~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~D 240 (339)
+.......+++.+++++|||++++|||+|+.++.++++ ++ .++|+||+++|+|++||+..+
T Consensus 190 ~~~~~~~~~~~~~~~~a~G~~~~~VdG~d~~~l~~al~----~~--~~~P~lI~v~T~kg~G~~~~e 250 (616)
T 3mos_A 190 PAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFG----QA--KHQPTAIIAKTFKGRGITGVE 250 (616)
T ss_dssp BCTTTTCHHHHHHHHHHTTCEEEEEETTCHHHHHHHHH----SC--CSSCEEEEEECCTTTTSTTTT
T ss_pred CcccccChHHHHHHHHHcCCeEEEEcCCCHHHHHHHHH----hc--CCCCEEEEEEEeccccccccc
Confidence 77666566789999999999999999999998887653 22 579999999999999998654
No 23
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=99.88 E-value=1.3e-22 Score=213.79 Aligned_cols=233 Identities=18% Similarity=0.112 Sum_probs=157.3
Q ss_pred cccccccCCCChHHHHHH-HHHccC------CCCeeeeC-CCC---cccccccCCCHHHHHHHhhCCCCCCCcCCCCccc
Q 019523 19 KMFGFVHLYNGQEAVSTG-FIKLLK------KEDSVVST-YRD---HVHALSKGVPARAVMSELFGKATGCCRGQGGSMH 87 (339)
Q Consensus 19 ~~~g~~~~~~G~Ea~~~~-~~~~l~------~~D~i~~~-~R~---~~~~l~~g~~p~~~~~el~~~~~~~~~g~~G~~h 87 (339)
++.|++.++.|.--+.+. ....|+ ++|+|+.. |-+ +++.+..|.-+.+-+..++..... .|-.|..|
T Consensus 102 ~~gGH~gs~ls~ael~~~l~~~~~~~~~~~~~~D~V~~~GH~sp~~Ya~~~l~Gr~~~e~l~~fRq~~~~--~gl~~~p~ 179 (886)
T 2qtc_A 102 ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEVHG--NGLSSYPH 179 (886)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHTCCCCCSSSCCCEEECCGGGHHHHHHHHHHTTSSCHHHHTTBTCCTTS--SCBCSSCC
T ss_pred CCccCcCCcHHHHHHHHHHHHHhcCCCCCCCCCCEEEEcchhHHHHHHHHHHhCCCCHHHHHhccCCCCC--CCCCCCCC
Confidence 345665555555434333 344466 46877664 333 222444664333333333332111 12223233
Q ss_pred cccCCCcccccccccccchHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCC-EEEEEEc
Q 019523 88 MFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVEN 166 (339)
Q Consensus 88 ~~~~~~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp-vi~vv~N 166 (339)
.+..+..+...+|+||.+++.|+|+|++.++...+....+.+++|||++|||++++|+++|+|++|++++|+ +||||+|
T Consensus 180 ~~~~p~~~~~~tG~~G~g~s~AiG~A~a~~~l~~~~~~~~~~~~v~aviGDG~l~eG~~~EAl~~A~~~~L~nli~Vvn~ 259 (886)
T 2qtc_A 180 PKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINC 259 (886)
T ss_dssp TTTSTTTCCCCCCSTTHHHHHHHHHHHHHHHHHHTTSCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEE
T ss_pred cccCCCcccccccccCccHHHHHHHHHHhhhhcccccccCCCCEEEEEECCccccccchHHHHHHHHHcCCCcEEEEEEC
Confidence 222222356678999999999999999998843222223578899999999999999999999999999997 9999999
Q ss_pred CCeeeccccccc-ccChhhhhhcccCCCcEEEe-----------------------------------------------
Q 019523 167 NLWAIGMSHLRA-TSDPQIYKKGPAFGMPGFHV----------------------------------------------- 198 (339)
Q Consensus 167 N~~~i~~~~~~~-~~~~d~~~~a~a~G~~~~~V----------------------------------------------- 198 (339)
|+++|+.+.... ....++.++++++||++++|
T Consensus 260 N~~si~~~v~~~~~~~~~l~~~~~~~G~~~~~v~~g~~~~~ll~~~~~~~l~~~~~~~~d~~~q~~~~~~g~~~r~~~F~ 339 (886)
T 2qtc_A 260 NLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFG 339 (886)
T ss_dssp CSBCSSSBSCTTSCHHHHHHHHHHHTTCEEEEECBCTTHHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHHHHHHHTST
T ss_pred CCcccCCCccccccccHHHHHHHHhCCCCEEEEecchhHHHHHccCCchHHHHHHHhccchhhhhhhhccchHHHHhhcc
Confidence 999998876643 23568899999999999988
Q ss_pred ----------------------cCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCCCC--CCC-----CCCCHHH
Q 019523 199 ----------------------DGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA--DPD-----ELRDPAE 249 (339)
Q Consensus 199 ----------------------dg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~~~--D~~-----~yr~~~e 249 (339)
||+|+.+|++++++|.+. .++|+||+++|++++||+.. ++. .|++.++
T Consensus 340 ~~~~~~~l~~~~~d~~i~~l~~dGhD~~~l~~a~~~A~~~---~~~PtlI~~~T~KG~G~~~~~e~~~~~H~~~~l~~~~ 416 (886)
T 2qtc_A 340 KYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQET---KGKATVILAHTIKGYGMGDAAKGKNIAHQVKKMNMDG 416 (886)
T ss_dssp TSHHHHTTTTTCCHHHHHTCCBGGGCHHHHHHHHHHHHHC---CSSCEEEEEECCTTTTCTTCC-------------CHH
T ss_pred cchHHHHHHhhcChhhHhhcccCCCCHHHHHHHHHHHHHc---CCCCEEEEEeeeeccccchhhcCCccccCCCCCCHHH
Confidence 699999999877666542 35899999999999999742 222 2677777
Q ss_pred HHHHhhC
Q 019523 250 KARYAAR 256 (339)
Q Consensus 250 ~~~~~~~ 256 (339)
++.|+.+
T Consensus 417 ~~~~r~~ 423 (886)
T 2qtc_A 417 VRHIRDR 423 (886)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777654
No 24
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=99.80 E-value=3.2e-20 Score=189.39 Aligned_cols=157 Identities=21% Similarity=0.239 Sum_probs=123.3
Q ss_pred CCHHHHHHHhhCCCCC--CCcCCCCccccccC-------CCc--ccccccccccchHHHHHHHHHHHHhhhhhhccCCCc
Q 019523 62 VPARAVMSELFGKATG--CCRGQGGSMHMFSK-------EHN--LLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 130 (339)
Q Consensus 62 ~~p~~~~~el~~~~~~--~~~g~~G~~h~~~~-------~~~--~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~ 130 (339)
+++..++.+|...+++ .+..+.|++.+|.. +.. .+++.|+||+++|.|+|+++| .+++
T Consensus 364 ~~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~AiGaala-----------~~~~ 432 (590)
T 1v5e_A 364 LQFYQVYNAINNHADEDAIYSIDVGNSTQTSIRHLHMTPKNMWRTSPLFATMGIAIPGGLGAKNT-----------YPDR 432 (590)
T ss_dssp CCHHHHHHHHHHHSCTTCEEEECSSHHHHGGGGTCCCCTTSEEECCCSSCCTTCHHHHHHHHHHH-----------CTTS
T ss_pred cCHHHHHHHHHhhCCCCCEEEECCchHHHHHHHhcccCCCCeEEcCCCCCcccChHHHHHHHHHh-----------CCCC
Confidence 7899999999888764 34567776544421 122 245789999999999999999 6788
Q ss_pred EEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeeccccccc---------ccChhhhhhcccCCCcEEEecC
Q 019523 131 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHLRA---------TSDPQIYKKGPAFGMPGFHVDG 200 (339)
Q Consensus 131 ~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~~~~---------~~~~d~~~~a~a~G~~~~~Vdg 200 (339)
+|||++|||+|+++ +++|++|+++++|+++||.|| +|++....+.. ...+|+.+++++||+++++|++
T Consensus 433 ~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~q~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~ 510 (590)
T 1v5e_A 433 QVWNIIGDGAFSMT--YPDVVTNVRYNMPVINVVFSNTEYAFIKNKYEDTNKNLFGVDFTDVDYAKIAEAQGAKGFTVSR 510 (590)
T ss_dssp CEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCTTGGGTTSSSCCSCCCCCCCCCCHHHHHHHTTSEEEEECB
T ss_pred eEEEEEechHHhch--HHHHHHHHHhCCCCEEEEEECCchHHHHHHHHHhcCCCccccCCCCCHHHHHHHcCCEEEEECC
Confidence 99999999999998 899999999999988888777 67665432211 2357999999999999999975
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCC
Q 019523 201 MDVLKVREVAKEAIERARRGEGPTLVECETYRFR 234 (339)
Q Consensus 201 ~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~ 234 (339)
+.++.+++++|++..+. ++|+|||+.|+|..
T Consensus 511 --~~el~~al~~a~~~~~~-~gp~liev~~~~~~ 541 (590)
T 1v5e_A 511 --IEDMDRVMAEAVAANKA-GHTVVIDCKITQDR 541 (590)
T ss_dssp --HHHHHHHHHHHHHHHHT-TCCEEEEEECCSCC
T ss_pred --HHHHHHHHHHHHHhcCC-CCCEEEEEEecccc
Confidence 55887777777765543 89999999999865
No 25
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=99.79 E-value=6.4e-20 Score=188.01 Aligned_cols=158 Identities=19% Similarity=0.168 Sum_probs=124.0
Q ss_pred CCHHHHHHHhhCCCCC--CCcCCCCccccccC-------C--CcccccccccccchHHHHHHHHHHHHhhhhhhccCCCc
Q 019523 62 VPARAVMSELFGKATG--CCRGQGGSMHMFSK-------E--HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 130 (339)
Q Consensus 62 ~~p~~~~~el~~~~~~--~~~g~~G~~h~~~~-------~--~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~ 130 (339)
+++..++..|...+++ .+.++.|++.+|.. + +...+++|+||+++|+|+|+++| .+++
T Consensus 393 ~~~~~~~~~L~~~l~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~g~~G~~G~~l~~AiGaala-----------~~~~ 461 (616)
T 2pan_A 393 VKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAA-----------DPKR 461 (616)
T ss_dssp BCHHHHHHHHHHHSCTTEEEEECSSHHHHHHHHHCCCCSTTSEEECTTTCCTTCHHHHHHHHHHH-----------CTTC
T ss_pred cCHHHHHHHHHHhCCCCcEEEEcCcHHHHHHHHhcccCCCCeEEcCCCcccccchHHHHHHHHHh-----------CCCC
Confidence 7899999999887764 35567775443321 1 22456789999999999999999 6788
Q ss_pred EEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCC-eeeccccc--------------c--ccc----Chhhhhhcc
Q 019523 131 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL--------------R--ATS----DPQIYKKGP 189 (339)
Q Consensus 131 ~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~-~~i~~~~~--------------~--~~~----~~d~~~~a~ 189 (339)
+|||++|||+++++ +++|++|+++++|+++||.||+ |++....+ . ... .+|+.++++
T Consensus 462 ~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~ 539 (616)
T 2pan_A 462 NVVAISGDFDFQFL--IEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAE 539 (616)
T ss_dssp EEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHGGGGTCCCSCBCCCCCTTCGGGTTCCCCHHHHHH
T ss_pred cEEEEEcchhhhCC--HHHHHHHHHhCCCeEEEEEECCcchHHHHHHHHhcCCccccccccccccccCCCCCCCHHHHHH
Confidence 99999999999998 8899999999999887777774 76632211 0 111 268999999
Q ss_pred cCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCC
Q 019523 190 AFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFR 234 (339)
Q Consensus 190 a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~ 234 (339)
+||+++++|++.+ ++.+++++|+++++..++|+|||+.|+|..
T Consensus 540 a~G~~~~~v~~~~--el~~al~~a~~~~~~~~gp~lIev~~~~~~ 582 (616)
T 2pan_A 540 GLGCKAIRVFKPE--DIAPAFEQAKALMAQYRVPVVVEVILERVT 582 (616)
T ss_dssp HTTCEEEEECSGG--GHHHHHHHHHHHHHHHCSCEEEEEEBCSCC
T ss_pred HcCCeEEEECCHH--HHHHHHHHHHhhcccCCCcEEEEEEecccc
Confidence 9999999998654 888888888776666789999999999866
No 26
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=99.78 E-value=6.6e-20 Score=186.19 Aligned_cols=153 Identities=16% Similarity=0.202 Sum_probs=117.8
Q ss_pred CCHHHHHHHhhCCCCC--CCcCCCCccccccC-------CC--cccccccccccchHHHHHHHHHHHHhhhhhhccCCCc
Q 019523 62 VPARAVMSELFGKATG--CCRGQGGSMHMFSK-------EH--NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 130 (339)
Q Consensus 62 ~~p~~~~~el~~~~~~--~~~g~~G~~h~~~~-------~~--~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~ 130 (339)
++|..++..|...++. .+..+.|.+.+|.. +. ..+++.|+||+++|.|+|+++| .+++
T Consensus 371 l~~~~v~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~g~g~mG~~l~~AiGaala-----------~~~~ 439 (566)
T 1ozh_A 371 LHPLRIVRAMQDIVNSDVTLTVDMGSFHIWIARYLYTFRARQVMISNGQQTMGVALPWAIGAWLV-----------NPER 439 (566)
T ss_dssp BCHHHHHHHHHHHCCTTEEEEECSSHHHHHHHHTGGGCCCSEEECCCTTCCTTCHHHHHHHHHHH-----------STTS
T ss_pred cCHHHHHHHHHHhCCCCCEEEEcCcHHHHHHHHhcccCCCCeEEeCCCcccccchHHHHHHHHHh-----------CCCC
Confidence 7888999998887764 34566664433211 12 2356789999999999999999 6789
Q ss_pred EEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeeccccc---------ccccChhhhhhcccCCCcEEEecC
Q 019523 131 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHL---------RATSDPQIYKKGPAFGMPGFHVDG 200 (339)
Q Consensus 131 ~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~~---------~~~~~~d~~~~a~a~G~~~~~Vdg 200 (339)
+|||++|||+++++ +++|++|.++++|+++||.|| +|++....+ .....+|+.+++++||+++++|++
T Consensus 440 ~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~ 517 (566)
T 1ozh_A 440 KVVSVSGDGGFLQS--SMELETAVRLKANVLHLIWVDNGYNMVAIQEEKKYQRLSGVEFGPMDFKAYAESFGAKGFAVES 517 (566)
T ss_dssp EEEEEEEHHHHHHH--TTHHHHHHHHTCCEEEEEEECSBCHHHHHHHHHHHSSCCSCBCCCCCHHHHHHTTTSEEEECCS
T ss_pred CEEEEEcChHHhcc--HHHHHHHHHhCCCcEEEEEECCchhHHHHHHHHhcCCCccCcCCCCCHHHHHHHcCCeEEEeCC
Confidence 99999999999997 789999999999988888877 566643221 122457999999999999999986
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeC
Q 019523 201 MDVLKVREVAKEAIERARRGEGPTLVECETYRF 233 (339)
Q Consensus 201 ~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~ 233 (339)
.+ ++.+ +++++++.++|+|||+.|+|.
T Consensus 518 ~~--el~~----al~~a~~~~gp~liev~~~~~ 544 (566)
T 1ozh_A 518 AE--ALEP----TLRAAMDVDGPAVVAIPVDYR 544 (566)
T ss_dssp GG--GHHH----HHHHHHHSSSCEEEEEEBCCT
T ss_pred HH--HHHH----HHHHHHhCCCCEEEEEEeCCC
Confidence 54 5555 555555678999999999864
No 27
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=99.78 E-value=5e-20 Score=185.52 Aligned_cols=152 Identities=20% Similarity=0.321 Sum_probs=117.6
Q ss_pred CCCHHHHHHHhhCCCCC--CCcCCCCcccccc-----C--CCc--ccccccccccchHHHHHHHHHHHHhhhhhhccCCC
Q 019523 61 GVPARAVMSELFGKATG--CCRGQGGSMHMFS-----K--EHN--LLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCD 129 (339)
Q Consensus 61 g~~p~~~~~el~~~~~~--~~~g~~G~~h~~~-----~--~~~--~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~ 129 (339)
.+++..++.+|...+++ .+..+.|++..|. . +.. .+.+ |+||+++|.|+|+++| .++
T Consensus 352 ~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~~~~g-g~~G~~l~~A~G~a~a-----------~~~ 419 (528)
T 1q6z_A 352 RLHPETVFDTLNDMAPENAIYLNESTSTTAQMWQRLNMRNPGSYYFCAA-GGLGFALPAAIGVQLA-----------EPE 419 (528)
T ss_dssp SBCHHHHHHHHHHHSCTTCEEEEECTTSHHHHHHHCCCCSSSCEEECTT-CCTTSHHHHHHHHHHH-----------CTT
T ss_pred CcCHHHHHHHHHhhCCCCeEEEECCcccHHHHHHhccccCCCcEECCCC-ccccchHHHHHHHHHh-----------CCC
Confidence 37899999999888764 3456666543321 1 112 2345 9999999999999999 678
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCC-eeecccccc----------cccChhhhhhcccCCCcEEEe
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHLR----------ATSDPQIYKKGPAFGMPGFHV 198 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~-~~i~~~~~~----------~~~~~d~~~~a~a~G~~~~~V 198 (339)
++|||++|||+++++ +++|++|.++++|+++||.||+ |++....+. ....+|+.+++++||+++++|
T Consensus 420 ~~vv~~~GDG~~~~~--~~~l~~a~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v 497 (528)
T 1q6z_A 420 RQVIAVIGDGSANYS--ISALWTAAQYNIPTIFVIMNNGTYGALRWFAGVLEAENVPGLDVPGIDFRALAKGYGVQALKA 497 (528)
T ss_dssp SCEEEEEEHHHHTTT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCCSCCSCBCCCCCHHHHHHHHTCEEEEE
T ss_pred CcEEEEECCcHHHhh--HHHHHHHHHhCCCeEEEEEeCCcchHhHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCeEEEe
Confidence 899999999999999 9999999999999888888774 776443211 114579999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEee
Q 019523 199 DGMDVLKVREVAKEAIERARRGEGPTLVECETYR 232 (339)
Q Consensus 199 dg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r 232 (339)
++.+ ++ .++++++++.++|+|||+.|++
T Consensus 498 ~~~~--~l----~~al~~a~~~~gp~liev~~~~ 525 (528)
T 1q6z_A 498 DNLE--QL----KGSLQEALSAKGPVLIEVSTVS 525 (528)
T ss_dssp SSHH--HH----HHHHHHHHTCSSCEEEEEEBCC
T ss_pred CCHH--HH----HHHHHHHHHCCCcEEEEEEecC
Confidence 8654 44 4566777778999999999875
No 28
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=99.77 E-value=1.3e-19 Score=184.82 Aligned_cols=157 Identities=20% Similarity=0.238 Sum_probs=120.4
Q ss_pred CCCHHHHHHHhhCCCCC--CCcCCCCcccccc-------CCCc--ccccccccccchHHHHHHHHHHHHhhhhhhccCCC
Q 019523 61 GVPARAVMSELFGKATG--CCRGQGGSMHMFS-------KEHN--LLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCD 129 (339)
Q Consensus 61 g~~p~~~~~el~~~~~~--~~~g~~G~~h~~~-------~~~~--~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~ 129 (339)
.+++..++..|...++. .+..+.|++.+|. .+.. .+.+.|+||+++|.|+|+++| .++
T Consensus 374 ~l~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~~~~g~g~mG~~l~~AiGaala-----------~~~ 442 (589)
T 2pgn_A 374 PASMFRAMAEVRKVQRPEDIIVTDIGNHTLPMFGGAILQRPRRLVTSMAEGILGCGFPMALGAQLA-----------EPN 442 (589)
T ss_dssp SCCHHHHHHHHHHTCCTTCEEEECSSTTHHHHHHHCCCSSTTCEESCTTTCCTTCHHHHHHHHHHH-----------CTT
T ss_pred CcCHHHHHHHHHHhCCCCCEEEEcCchHHHHHHHhcccCCCCcEECCCCcchhhhHHHHHHHHHHh-----------CCC
Confidence 37899999999888764 3456666543331 1122 245679999999999999999 678
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCC-eeeccccc---------ccccChhhhhhcccCCCcEEEec
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL---------RATSDPQIYKKGPAFGMPGFHVD 199 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~-~~i~~~~~---------~~~~~~d~~~~a~a~G~~~~~Vd 199 (339)
++|||++|||+|+++ +++|++|.++++|+++||.||+ |++....+ .....+|+.+++++||+++++|+
T Consensus 443 ~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~ 520 (589)
T 2pgn_A 443 SRVFLGTGDGALYYH--FNEFRVAVEHKLPVITMVFTNESYGANWTLMNHQFGQNNWTEFMNPDWVGIAKAFGAYGESVR 520 (589)
T ss_dssp SCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHHSSCCSCBCCCCCHHHHHHHHTCEEEECT
T ss_pred CcEEEEEeeHHHHhh--HHHHHHHHHhCCCeEEEEEECCCcccchHHHHhhcCCCccccCCCCCHHHHHHHCCCeEEEEC
Confidence 899999999999998 7999999999999888887775 66644221 12235799999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCC
Q 019523 200 GMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGH 236 (339)
Q Consensus 200 g~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh 236 (339)
+.+ ++.++ ++++++.++|+|||+.|+|..+.
T Consensus 521 ~~~--el~~a----l~~a~~~~gp~liev~~~~~~~~ 551 (589)
T 2pgn_A 521 ETG--DIAGA----LQRAIDSGKPALIEIPVSKTQGL 551 (589)
T ss_dssp TTC--CHHHH----HHHHHHHCSCEEEEEECCSSSST
T ss_pred CHH--HHHHH----HHHHHhCCCCEEEEEEecCCCCc
Confidence 766 55554 44455568999999999987654
No 29
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=99.76 E-value=2.2e-19 Score=183.19 Aligned_cols=157 Identities=23% Similarity=0.301 Sum_probs=119.2
Q ss_pred CCCHHHHHHHhhCCCCC--CCcCCCCcccccc-------CCC--cccccccccccchHHHHHHHHHHHHhhhhhhccCCC
Q 019523 61 GVPARAVMSELFGKATG--CCRGQGGSMHMFS-------KEH--NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCD 129 (339)
Q Consensus 61 g~~p~~~~~el~~~~~~--~~~g~~G~~h~~~-------~~~--~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~ 129 (339)
.+++..++.+|...+++ .+..+.|++.+|. .+. ...+++|+||+++|+|+|+++| .++
T Consensus 376 ~l~~~~~~~~l~~~lp~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~g~~G~~G~~l~~AiGaala-----------~~~ 444 (590)
T 1ybh_A 376 AIPPQYAIKVLDELTDGKAIISTGVGQHQMWAAQFYNYKKPRQWLSSGGLGAMGFGLPAAIGASVA-----------NPD 444 (590)
T ss_dssp BCCHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHSCCCSSTTSEECCCSSCCTTCHHHHHHHHHHH-----------CTT
T ss_pred CcCHHHHHHHHHHhCCCCCEEEEcCcHHHHHHHHhcccCCCCeEEeCCCcccccchHHHHHHHHHh-----------CCC
Confidence 37899999999887764 3456677543332 112 2356779999999999999999 678
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeeccccc----------cc--c------cChhhhhhccc
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHL----------RA--T------SDPQIYKKGPA 190 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~~----------~~--~------~~~d~~~~a~a 190 (339)
++|||++|||+++++ +++|++|+++++|+++||.|| +|++....+ .. . ..+|+.+++++
T Consensus 445 ~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~~~~a~a 522 (590)
T 1ybh_A 445 AIVVDIDGDGSFIMN--VQELATIRVENLPVKVLLLNNQHLGMVMQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAA 522 (590)
T ss_dssp SCEEEEEEHHHHHHT--TTHHHHHHHTTCCEEEEEEECSBCHHHHHHHHHHSTTCCCSCBCSCGGGTTSCSSCHHHHHHH
T ss_pred CcEEEEEccchhhcc--HHHHHHHHHhCCCcEEEEEECCcchHHHHHHHHhcCCccccccccccccccCCCCCHHHHHHH
Confidence 899999999999998 889999999999988777776 566643210 00 1 14689999999
Q ss_pred CCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCC
Q 019523 191 FGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGH 236 (339)
Q Consensus 191 ~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh 236 (339)
||+++++|++ +.++.+ +++++++.++|+|||+.|+|....
T Consensus 523 ~G~~~~~v~~--~~el~~----al~~a~~~~gp~liev~~~~~~~~ 562 (590)
T 1ybh_A 523 CGIPAARVTK--KADLRE----AIQTMLDTPGPYLLDVICPHQEHV 562 (590)
T ss_dssp TTCCEEEECB--HHHHHH----HHHHHHHSSSCEEEEEECCTTCCC
T ss_pred cCCeEEEeCC--HHHHHH----HHHHHHhCCCCEEEEEEecCCccc
Confidence 9999999974 446555 555566678999999999987653
No 30
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=99.76 E-value=1.7e-19 Score=182.99 Aligned_cols=155 Identities=18% Similarity=0.272 Sum_probs=117.5
Q ss_pred CCCHHHHHHHhhCCCCC--CCcCCCCccccccC-------CC--cccccccccccchHHHHHHHHHHHHhhhhhhccCCC
Q 019523 61 GVPARAVMSELFGKATG--CCRGQGGSMHMFSK-------EH--NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCD 129 (339)
Q Consensus 61 g~~p~~~~~el~~~~~~--~~~g~~G~~h~~~~-------~~--~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~ 129 (339)
.+++..++.+|...+++ .+..+.|++.+|.. +. ..+++.|+||+++|.|+|+++|.| + ++
T Consensus 369 ~~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~g~g~~G~~l~~AiGaa~a~~--~-------~~ 439 (563)
T 2uz1_A 369 ALHPFHASQVIAKHVDAGVTVVADGALTYLWLSEVMSRVKPGGFLCHGYLGSMGVGFGTALGAQVADL--E-------AG 439 (563)
T ss_dssp SCCHHHHHHHHHTTCSTTEEEEECSSHHHHHHHHHHTTSCCSEEECCCTTCCTTTHHHHHHHHHHHHH--H-------HT
T ss_pred CcCHHHHHHHHHHhCCCCcEEEEcCchHHHHHHHhccccCCCeEECCCCCccccChHHHHHHHHHHhh--C-------CC
Confidence 57899999999988874 34567775433211 12 234567999999999999999954 1 57
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeeccccc-------cc----ccChhhhhhcccCCCcEEE
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHL-------RA----TSDPQIYKKGPAFGMPGFH 197 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~~-------~~----~~~~d~~~~a~a~G~~~~~ 197 (339)
++|||++|||+++++ +++|++|.++++|+++||.|| +|++....+ .. ...+|+.+++++||+++++
T Consensus 440 ~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~ 517 (563)
T 2uz1_A 440 RRTILVTGDGSVGYS--IGEFDTLVRKQLPLIVIIMNNQSWGATLHFQQLAVGPNRVTGTRLENGSYHGVAAAFGADGYH 517 (563)
T ss_dssp CEEEEEEEHHHHGGG--TTHHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCTTCCCSCBCCCCCHHHHHHHTTCEEEE
T ss_pred CeEEEEEccHHHhCC--HHHHHHHHHhCCCeEEEEEeCCcchHHHHHHHHhcCCCcccCCcCCCCCHHHHHHHcCCeEEE
Confidence 899999999999998 789999999999988777776 576644321 11 1347999999999999999
Q ss_pred ecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEee
Q 019523 198 VDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 232 (339)
Q Consensus 198 Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r 232 (339)
|++ +.++.+ +++++++.++|+|||+.|++
T Consensus 518 v~~--~~~l~~----al~~a~~~~gp~liev~~~~ 546 (563)
T 2uz1_A 518 VDS--VESFSA----ALAQALAHNRPACINVAVAL 546 (563)
T ss_dssp ECS--HHHHHH----HHHHHHHSSSCEEEEEECCS
T ss_pred eCC--HHHHHH----HHHHHHHCCCCEEEEEEecc
Confidence 975 456655 55555567899999999974
No 31
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=99.76 E-value=3.9e-19 Score=179.90 Aligned_cols=155 Identities=21% Similarity=0.266 Sum_probs=116.7
Q ss_pred CCCHHHHHHHhhCCCCC--CCcCCCCcccccc-------CCCc--ccccccccccchHHHHHHHHHHHHhhhhhhccCCC
Q 019523 61 GVPARAVMSELFGKATG--CCRGQGGSMHMFS-------KEHN--LLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCD 129 (339)
Q Consensus 61 g~~p~~~~~el~~~~~~--~~~g~~G~~h~~~-------~~~~--~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~ 129 (339)
.++|..++..|...+++ .+..+.|.+.+|. .+.. .+++.|+||+++|.|+|+++| .++
T Consensus 356 ~~~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~AiGaala-----------~~~ 424 (549)
T 3eya_A 356 AIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAQAT-----------EPE 424 (549)
T ss_dssp CBCHHHHHHHHHHHSCTTCEEEECTTHHHHHHHHHCCCCSSCEEECCTTTCCTTCHHHHHHHHHHH-----------STT
T ss_pred CcCHHHHHHHHHhhCCCCCEEEEcCcHHHHHHHHhCccCCCCcEEeCCCCchhhhHHHHHHHHHHh-----------CCC
Confidence 47788888888877664 3456666543331 1122 246789999999999999999 678
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeecccccc---------cccChhhhhhcccCCCcEEEec
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHLR---------ATSDPQIYKKGPAFGMPGFHVD 199 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~~~---------~~~~~d~~~~a~a~G~~~~~Vd 199 (339)
++|||++|||+|+|+ +++|++|.++++|+++||.|| +|++....+. ....+|+.+++++||+++++|+
T Consensus 425 ~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~nN~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~ 502 (549)
T 3eya_A 425 RQVVAMCGDGGFSML--MGDFLSVVQMKLPVKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVE 502 (549)
T ss_dssp SCEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCCCC------------CCBCCCCCHHHHHHHTTSEEEEEC
T ss_pred CcEEEEEccchhhcc--HHHHHHHHHhCCCeEEEEEeCCccHHHHHHHHhcCCCCcCCcCCCCCHHHHHHHcCCcEEEeC
Confidence 899999999999998 899999999999987777777 4655321111 1235799999999999999997
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCC
Q 019523 200 GMDVLKVREVAKEAIERARRGEGPTLVECETYRFR 234 (339)
Q Consensus 200 g~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~ 234 (339)
+.+ ++.+ +++++++.+||+|||+.|.+..
T Consensus 503 ~~~--~l~~----al~~a~~~~gp~liev~~~~~~ 531 (549)
T 3eya_A 503 KAS--EVDE----ALQRAFSIDGPVLVDVVVAKEE 531 (549)
T ss_dssp SGG--GHHH----HHHHHHHSSSCEEEEEEBCCCC
T ss_pred CHH--HHHH----HHHHHHhCCCCEEEEEEecccc
Confidence 655 5544 5666667799999999998754
No 32
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=99.75 E-value=2.3e-19 Score=185.69 Aligned_cols=155 Identities=21% Similarity=0.294 Sum_probs=116.5
Q ss_pred CCHHHHHHHhhCCC---CCC--CcCCCCcccccc-------CC--CcccccccccccchHHHHHHHHHHHHhhhhhhccC
Q 019523 62 VPARAVMSELFGKA---TGC--CRGQGGSMHMFS-------KE--HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD 127 (339)
Q Consensus 62 ~~p~~~~~el~~~~---~~~--~~g~~G~~h~~~-------~~--~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~ 127 (339)
++|..++.+|...+ ++. +..+.|++.+|. .+ +..+++.|+||+++|+|+|+++| .
T Consensus 461 l~~~~v~~~L~~~l~~~~~~~iv~~~vg~~~~~~~~~~~~~~p~~~~~sg~~G~mG~~lpaAiGaalA-----------~ 529 (677)
T 1t9b_A 461 IKPQTVIKKLSKVANDTGRHVIVTTGVGQHQMWAAQHWTWRNPHTFITSGGLGTMGYGLPAAIGAQVA-----------K 529 (677)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEEEECSSHHHHHHHHHSCCCSTTCEECCCSSCCTTCHHHHHHHHHHH-----------C
T ss_pred cCHHHHHHHHHHHhhcCCCCEEEEeCCchHHHHHHHhcccCCCCeEEeCCCcchhhchHHHHHHHHHh-----------C
Confidence 67888988887765 332 334455443332 11 22467789999999999999999 6
Q ss_pred CCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeeccccc----------ccccChhhhhhcccCCCcEE
Q 019523 128 CDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHL----------RATSDPQIYKKGPAFGMPGF 196 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~~----------~~~~~~d~~~~a~a~G~~~~ 196 (339)
++++|||++|||+|+|+ +++|++|+++++|+++||.|| +|++....+ .....+|+.+++++||++++
T Consensus 530 p~~~Vv~i~GDGsf~~~--~~eL~ta~~~~l~v~ivV~NN~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~la~a~G~~~~ 607 (677)
T 1t9b_A 530 PESLVIDIDGDASFNMT--LTELSSAVQAGTPVKILILNNEEQGMVTQWQSLFYEHRYSHTHQLNPDFIKLAEAMGLKGL 607 (677)
T ss_dssp TTSEEEEEEEHHHHHHH--GGGHHHHHHHTCCCEEEEEECSSCHHHHHHHHHHSTTCCCSCCCCCCCHHHHHHHTTCEEE
T ss_pred CCCeEEEEEeehHHhcc--HHHHHHHHHhCCCeEEEEEeCCCchhhhhhhhhhcCCCcccCcCCCCCHHHHHHHcCCeEE
Confidence 88999999999999997 889999999999988777777 466533211 01235799999999999999
Q ss_pred EecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCC
Q 019523 197 HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRG 235 (339)
Q Consensus 197 ~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~g 235 (339)
+|++ +.++.+ +++++++.++|+|||+.|+|...
T Consensus 608 ~v~~--~~el~~----al~~a~~~~gp~lIev~~~~~~~ 640 (677)
T 1t9b_A 608 RVKK--QEELDA----KLKEFVSTKGPVLLEVEVDKKVP 640 (677)
T ss_dssp EECS--HHHHHH----HHHHHHHCSSCEEEEEEBCSSCC
T ss_pred EECC--HHHHHH----HHHHHHHCCCcEEEEEEecCCcc
Confidence 9975 446655 55555567899999999998654
No 33
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=99.75 E-value=3.2e-19 Score=181.36 Aligned_cols=153 Identities=21% Similarity=0.203 Sum_probs=117.0
Q ss_pred CCCHHHHHHHhhCCCCC-------CCcCCCCccccccC-------CCc--ccccccccccchHHHHHHHHHHHHhhhhhh
Q 019523 61 GVPARAVMSELFGKATG-------CCRGQGGSMHMFSK-------EHN--LLGGFAFIGEGIPVATGAAFTSKYRREVLK 124 (339)
Q Consensus 61 g~~p~~~~~el~~~~~~-------~~~g~~G~~h~~~~-------~~~--~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~ 124 (339)
.+++..++..|...+++ .+..+.|++.+|.. +.. .+++.|+||+++|.|+|+++|
T Consensus 381 ~~~~~~~~~~l~~~l~~~~~~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~g~g~mG~~l~~AiGaa~a--------- 451 (573)
T 2iht_A 381 GMRVHQVIDSMNTVMEEAAEPGEGTIVSDIGFFRHYGVLFARADQPFGFLTSAGCSSFGYGIPAAIGAQMA--------- 451 (573)
T ss_dssp SBCHHHHHHHHHHHHHHHSCTTCCEEEECSSHHHHHHHHHCCCCSTTSEECCSSSCCTTCHHHHHHHHHHH---------
T ss_pred CcCHHHHHHHHHHhcccccCCCCcEEEEcCcHhHHHHHHhcCcCCCCeEEcCCCCcccccHHHHHHHHHHh---------
Confidence 37889999888776642 34566665433211 122 356789999999999999999
Q ss_pred ccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeeccccc-----------ccccChhhhhhcccCC
Q 019523 125 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHL-----------RATSDPQIYKKGPAFG 192 (339)
Q Consensus 125 ~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~~-----------~~~~~~d~~~~a~a~G 192 (339)
.++++|||++|||+++++ +++|++|.++++|+++||.|| +|++....+ .....+|+.+++++||
T Consensus 452 --~~~~~vv~i~GDG~~~~~--~~~L~~a~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G 527 (573)
T 2iht_A 452 --RPDQPTFLIAGDGGFHSN--SSDLETIARLNLPIVTVVVNNDTNGLIELYQNIGHHRSHDPAVKFGGVDFVALAEANG 527 (573)
T ss_dssp --STTSCEEEEEEHHHHHHT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHHSSCCGGGTBCCCCCHHHHHHHTT
T ss_pred --CCCCcEEEEEccHHHHhH--HHHHHHHHHhCCCeEEEEEECCcchhhHHHHHHhcCCCcCccccCCCCCHHHHHHHcC
Confidence 678899999999999998 899999999999987777777 476644311 2223579999999999
Q ss_pred CcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEee
Q 019523 193 MPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 232 (339)
Q Consensus 193 ~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r 232 (339)
+++++|++ ..++. ++++++++.++|+|||+.|+|
T Consensus 528 ~~~~~v~~--~~~l~----~al~~a~~~~gp~liev~~~~ 561 (573)
T 2iht_A 528 VDATRATN--REELL----AALRKGAELGRPFLIEVPVNY 561 (573)
T ss_dssp CEEEECCS--HHHHH----HHHHHHHTSSSCEEEEEEBCC
T ss_pred CeEEEeCC--HHHHH----HHHHHHHhCCCCEEEEEECCC
Confidence 99999974 44554 466666678899999999988
No 34
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=99.75 E-value=3.6e-19 Score=180.07 Aligned_cols=152 Identities=14% Similarity=0.088 Sum_probs=115.9
Q ss_pred CCHHHHHHHhhCCCCC--CCcCCCCcccccc------CC--CcccccccccccchHHHHHHHHHHHHhhhhhhccCCCcE
Q 019523 62 VPARAVMSELFGKATG--CCRGQGGSMHMFS------KE--HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHV 131 (339)
Q Consensus 62 ~~p~~~~~el~~~~~~--~~~g~~G~~h~~~------~~--~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~ 131 (339)
+++..++.+|...+++ .+..+.|+..+.. .. +..+++.|+||+++|.|+|+++| .++++
T Consensus 360 ~~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~G~a~a-----------~~~~~ 428 (552)
T 1ovm_A 360 LTQENFWRTLQTFIRPGDIILADQGTSAFGAIDLRLPADVNFIVQPLWGSIGYTLAAAFGAQTA-----------CPNRR 428 (552)
T ss_dssp CCHHHHHHHHHHHCCTTCEEEECTTHHHHHHTTCCCCSSCEEECCTTTCCTTHHHHHHHHHHHH-----------CTTSC
T ss_pred cCHHHHHHHHHHhcCCCCEEEECCchHHHHHHhcccCCCCeEEechhhHhhhhHHHHHHHHHHh-----------CCCCc
Confidence 7889999998887763 3456666432211 11 12356789999999999999999 67889
Q ss_pred EEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeeccccc------ccccChhhhhhcccCCC----cEEEecC
Q 019523 132 TLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHL------RATSDPQIYKKGPAFGM----PGFHVDG 200 (339)
Q Consensus 132 vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~~------~~~~~~d~~~~a~a~G~----~~~~Vdg 200 (339)
|||++|||+++++ +++|.+|.++++|+++||.|| +|++..... .....+|+.+++++||+ ++++|++
T Consensus 429 vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~v~~ 506 (552)
T 1ovm_A 429 VIVLTGDGAAQLT--IQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQRYNDIALWNWTHIPQALSLDPQSECWRVSE 506 (552)
T ss_dssp EEEEEEHHHHHHH--TTHHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGGCCCCCCGGGSTTTSCSSCCEEEEEECB
T ss_pred EEEEECchHHHhH--HHHHHHHHHhCCCCEEEEEECCCCeEEEeeccCCCCcccCCCCCHHHHHHHhCCCcCCCEEEeCC
Confidence 9999999999987 899999999999988777777 577653211 11245799999999999 9999985
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCEEEEEEEee
Q 019523 201 MDVLKVREVAKEAIERARRGEGPTLVECETYR 232 (339)
Q Consensus 201 ~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r 232 (339)
. .++. ++++++++.++|+|||+.|++
T Consensus 507 ~--~~l~----~al~~a~~~~gp~liev~~~~ 532 (552)
T 1ovm_A 507 A--EQLA----DVLEKVAHHERLSLIEVMLPK 532 (552)
T ss_dssp H--HHHH----HHHHHHTTCSSEEEEEEECCT
T ss_pred H--HHHH----HHHHHHHhCCCCEEEEEEcCc
Confidence 4 4554 466667778899999999875
No 35
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=99.74 E-value=7.7e-19 Score=178.41 Aligned_cols=153 Identities=14% Similarity=0.092 Sum_probs=115.7
Q ss_pred CCCHHHHHHHhhCCCCC--CCcCCCCccccccC------CC--cccccccccccchHHHHHHHHHHHHhhhhhhccCCCc
Q 019523 61 GVPARAVMSELFGKATG--CCRGQGGSMHMFSK------EH--NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 130 (339)
Q Consensus 61 g~~p~~~~~el~~~~~~--~~~g~~G~~h~~~~------~~--~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~ 130 (339)
.+++..++.+|...+++ .+..+.|+..+... .. ..+++.|+||+++|+|+|+++| .+++
T Consensus 376 ~~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~Gaala-----------~~~~ 444 (570)
T 2vbf_A 376 PLSQDRLWQAVESLTQSNETIVAEQGTSFFGASTIFLKSNSRFIGQPLWGSIGYTFPAALGSQIA-----------DKES 444 (570)
T ss_dssp BCCHHHHHHHHHHHCCSSEEEEECTTHHHHHHTTSCCCTTCEEECCTTTCCTTTHHHHHHHHHHH-----------CTTS
T ss_pred CcCHHHHHHHHHHhcCCCCEEEEeCCHHHHHHHhcccCCCCeEecCccchhhhhhHHHHHHHHHh-----------CCCC
Confidence 47899999999887764 34566665322111 11 1346789999999999999999 6789
Q ss_pred EEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeeccccc------ccccChhhhhhcccCCCc-----EEEe
Q 019523 131 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHL------RATSDPQIYKKGPAFGMP-----GFHV 198 (339)
Q Consensus 131 ~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~~------~~~~~~d~~~~a~a~G~~-----~~~V 198 (339)
+|||++|||+++++ +++|++|.++++|+++||.|| +|++..... .....+|+.+++++||++ +++|
T Consensus 445 ~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~v 522 (570)
T 2vbf_A 445 RHLLFIGDGSLQLT--VQELGLSIREKLNPICFIINNDGYTVEREIHGPTQSYNDIPMWNYSKLPETFGATEDRVVSKIV 522 (570)
T ss_dssp EEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGGCCCCCCGGGHHHHTTCCTTTEEEEEE
T ss_pred cEEEEEcchhhhcC--HHHHHHHHHcCCCCEEEEEECCchHHHHHHhccCCCccCCCCCCHHHHHHHcCCCcCCcceEEe
Confidence 99999999999997 889999999999977777766 676643221 112457999999999998 8899
Q ss_pred cCCCHHHHHHHHHHHHHH-HHcCCCCEEEEEEEee
Q 019523 199 DGMDVLKVREVAKEAIER-ARRGEGPTLVECETYR 232 (339)
Q Consensus 199 dg~d~~~v~~a~~~A~~~-ar~~~gP~lIev~t~r 232 (339)
++ +.++.+ ++++ +++.++|+|||+.|+|
T Consensus 523 ~~--~~el~~----al~~a~~~~~~p~liev~~~~ 551 (570)
T 2vbf_A 523 RT--ENEFVS----VMKEAQADVNRMYWIELVLEK 551 (570)
T ss_dssp CB--HHHHHH----HHHHHHHCTTSEEEEEEECCT
T ss_pred cC--HHHHHH----HHHHHHhcCCCcEEEEEEcCc
Confidence 75 446555 5554 4677899999999875
No 36
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=99.74 E-value=5.7e-19 Score=179.08 Aligned_cols=157 Identities=15% Similarity=0.094 Sum_probs=116.7
Q ss_pred CCCHHHHHHHhhCCCCC--CCcCCCCcccccc------CC--CcccccccccccchHHHHHHHHHHHHhhhhhhccCCCc
Q 019523 61 GVPARAVMSELFGKATG--CCRGQGGSMHMFS------KE--HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 130 (339)
Q Consensus 61 g~~p~~~~~el~~~~~~--~~~g~~G~~h~~~------~~--~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~ 130 (339)
.+++..++.+|...+++ .+..+.|+..++. .+ ...+++.|+||+++|.|+|+++|.+.+ +.++
T Consensus 364 ~~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~Gaala~~~~-------~~~~ 436 (563)
T 2vk8_A 364 PLKQEWMWNQLGNFLQEGDVVIAETGTSAFGINQTTFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEI-------DPKK 436 (563)
T ss_dssp BCCHHHHHHHHTTTCCTTCEEEECTTHHHHHGGGSCCCSSCEEECCTTTCCTTHHHHHHHHHHHHHHHH-------CTTC
T ss_pred CcCHHHHHHHHHHhCCCCCEEEECCchHHHHHhhcCcCCCCeEEcccchhhhhhHHHHHHHHHHhCccc-------CCCC
Confidence 37899999999988864 3456666432211 11 123577899999999999999996654 4568
Q ss_pred EEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeeccccc------ccccChhhhhhcccCCCc---EEEecC
Q 019523 131 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHL------RATSDPQIYKKGPAFGMP---GFHVDG 200 (339)
Q Consensus 131 ~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~~------~~~~~~d~~~~a~a~G~~---~~~Vdg 200 (339)
+|||++|||+|+|+ +++|++|+++++|+++||.|| +|++..... .....+|+.+++++||++ +++|++
T Consensus 437 ~vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~v~~ 514 (563)
T 2vk8_A 437 RVILFIGDGSLQLT--VQEISTMIRWGLKPYLFVLNNDGYTIQKLIHGPKAQYNEIQGWDHLSLLPTFGAKDYETHRVAT 514 (563)
T ss_dssp CEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGGCCCCCCGGGHHHHTTCSSEEEEEECB
T ss_pred CEEEEEcchHhhcc--HHHHHHHHHcCCCcEEEEEECCcchhhhhhhCCCCCcccCCCCCHHHHHHHhCCCCCcEEEecC
Confidence 89999999999997 899999999999988888777 577643211 112456999999999999 999985
Q ss_pred CCHHHHHHHHHHHHH-HHHcC-CCCEEEEEEEee
Q 019523 201 MDVLKVREVAKEAIE-RARRG-EGPTLVECETYR 232 (339)
Q Consensus 201 ~d~~~v~~a~~~A~~-~ar~~-~gP~lIev~t~r 232 (339)
+.++.+ +++ ++.+. ++|+|||+.|++
T Consensus 515 --~~el~~----al~~~a~~~~~~p~liev~~~~ 542 (563)
T 2vk8_A 515 --TGEWDK----LTQDKSFNDNSKIRMIEVMLPV 542 (563)
T ss_dssp --HHHHHH----HHTCTTTTSCSSEEEEEEECCT
T ss_pred --HHHHHH----HHHHHHHhCCCCcEEEEEEeCc
Confidence 446555 555 44443 479999999874
No 37
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=99.73 E-value=1.2e-18 Score=176.94 Aligned_cols=153 Identities=20% Similarity=0.211 Sum_probs=115.9
Q ss_pred CCHHHHHHHhhCCCCC--CCcCCCCcc-----ccccC-CCc--ccccccccccchHHHHHHHHHHHHhhhhhhccCCCcE
Q 019523 62 VPARAVMSELFGKATG--CCRGQGGSM-----HMFSK-EHN--LLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHV 131 (339)
Q Consensus 62 ~~p~~~~~el~~~~~~--~~~g~~G~~-----h~~~~-~~~--~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~ 131 (339)
+++..++.+|...+++ .+..+.|+. ++..+ +.. .+++.|+||+++|+|+|+++| .++++
T Consensus 365 ~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~~g~~G~~l~~A~G~ala-----------~~~~~ 433 (568)
T 2wvg_A 365 LVNAEIARQVEALLTPNTTVIAETGDSWFNAQRMKLPNGARVEYEMQWGHIGWSVPAAFGYAVG-----------APERR 433 (568)
T ss_dssp CCHHHHHHHHHTTCCTTEEEEECSSHHHHHHHTCCCCTTCEEECCTTTCCTTTHHHHHHHHHHH-----------CTTSE
T ss_pred cCHHHHHHHHHHhCCCCCEEEEcCcHHHHHHhhcccCCCCeEEeCCCcchhhhHHHHHHHHHHh-----------CCCCc
Confidence 7899999999998875 345666632 22111 122 356789999999999999999 67899
Q ss_pred EEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeecccccc----cccChhhhhhcccCCC---------cEEE
Q 019523 132 TLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHLR----ATSDPQIYKKGPAFGM---------PGFH 197 (339)
Q Consensus 132 vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~~~----~~~~~d~~~~a~a~G~---------~~~~ 197 (339)
|||++|||+|+++ +++|++|.++++|+++||.|| +|++....+. ....+|+.+++++||+ ++++
T Consensus 434 vv~i~GDGs~~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~~~~~ 511 (568)
T 2wvg_A 434 NILMVGDGSFQLT--AQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNNIKNWDYAGLMEVFNGNGGYDSGAGKGLK 511 (568)
T ss_dssp EEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGCCCCCCHHHHHHHHHCTTSSSCCCCEEEE
T ss_pred EEEEEcChhHhcc--HHHHHHHHHcCCCcEEEEEECCcceEeeeeccCCCcCCCCCCHHHHHHHhCCCcccccCCcceEE
Confidence 9999999999997 889999999999977777666 6776543221 1245689999999999 8999
Q ss_pred ecCCCHHHHHHHHHHHHHHHHcC-CCCEEEEEEEeeC
Q 019523 198 VDGMDVLKVREVAKEAIERARRG-EGPTLVECETYRF 233 (339)
Q Consensus 198 Vdg~d~~~v~~a~~~A~~~ar~~-~gP~lIev~t~r~ 233 (339)
|++ ..++.+ +++++++. ++|+|||+.|+|.
T Consensus 512 v~~--~~el~~----al~~a~~~~~gp~liev~~~~~ 542 (568)
T 2wvg_A 512 AKT--GGELAE----AIKVALANTDGPTLIECFIGRE 542 (568)
T ss_dssp ESB--HHHHHH----HHHHHHHCCSSCEEEEEECCTT
T ss_pred eCC--HHHHHH----HHHHHHhcCCCcEEEEEEcCcc
Confidence 975 446655 45555554 8999999999763
No 38
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=99.73 E-value=8.7e-19 Score=177.90 Aligned_cols=154 Identities=22% Similarity=0.316 Sum_probs=116.2
Q ss_pred CCCHHHHHHHhhCCCCC--CCcCCCCcc-----ccccC-CC--cccccccccccchHHHHHHHHHHHHhhhhhhccCCCc
Q 019523 61 GVPARAVMSELFGKATG--CCRGQGGSM-----HMFSK-EH--NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 130 (339)
Q Consensus 61 g~~p~~~~~el~~~~~~--~~~g~~G~~-----h~~~~-~~--~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~ 130 (339)
.+++..++.+|...+++ .+..+.|.+ ++... +. ..+++.|+||+++|+|+|+++| .+++
T Consensus 360 ~l~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~G~ala-----------~~~~ 428 (566)
T 2vbi_A 360 GLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPSAFGNAMG-----------SQDR 428 (566)
T ss_dssp CCCHHHHHHHHHHHCCTTEEEEECSSHHHHHHHTCCCCTTCEEECCTTTCCTTTHHHHHHHHHHT-----------CTTS
T ss_pred ccCHHHHHHHHHHhcCCCCEEEECCchHHHhhhheECCCCCEEEecCcccchhhHHHHHHHHHHh-----------CCCC
Confidence 37899999999887764 345566632 22111 12 2346789999999999999999 6788
Q ss_pred EEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeecccccc----cccChhhhhhcccCCC-----cEEEecC
Q 019523 131 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHLR----ATSDPQIYKKGPAFGM-----PGFHVDG 200 (339)
Q Consensus 131 ~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~~~----~~~~~d~~~~a~a~G~-----~~~~Vdg 200 (339)
+|||++|||+++++ +++|++|+++++|+++||.|| +|++....+. ....+|+.+++++||+ ++++|++
T Consensus 429 ~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~v~~ 506 (566)
T 2vbi_A 429 QHVVMVGDGSFQLT--AQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATT 506 (566)
T ss_dssp EEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGCCCCCCTTTHHHHHHTTTCCCEEEEECS
T ss_pred cEEEEEcchHHHhh--HHHHHHHHHhCCCcEEEEEECCcceEEEeeccCCccCCCCCCHHHHHHHcCCCCCCccEEEeCC
Confidence 99999999999997 889999999999977777766 6766543221 2245799999999999 9999975
Q ss_pred CCHHHHHHHHHHHHHHHHcC-CCCEEEEEEEeeC
Q 019523 201 MDVLKVREVAKEAIERARRG-EGPTLVECETYRF 233 (339)
Q Consensus 201 ~d~~~v~~a~~~A~~~ar~~-~gP~lIev~t~r~ 233 (339)
+.++.+ +++++++. ++|+|||+.|+|.
T Consensus 507 --~~el~~----al~~a~~~~~gp~liev~~~~~ 534 (566)
T 2vbi_A 507 --PKELTE----AIARAKANTRGPTLIECQIDRT 534 (566)
T ss_dssp --HHHHHH----HHHHHHHCCSSCEEEEEECCTT
T ss_pred --HHHHHH----HHHHHHhcCCCcEEEEEEeCcc
Confidence 446555 55555555 8999999999763
No 39
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=99.73 E-value=4.5e-19 Score=180.02 Aligned_cols=152 Identities=17% Similarity=0.199 Sum_probs=114.5
Q ss_pred CCHHHHHHHhhCCCCC----CC-cCCCCccccc----cCC-CcccccccccccchHHHHHHHHHHHHhhhhhhccCCCcE
Q 019523 62 VPARAVMSELFGKATG----CC-RGQGGSMHMF----SKE-HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHV 131 (339)
Q Consensus 62 ~~p~~~~~el~~~~~~----~~-~g~~G~~h~~----~~~-~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~ 131 (339)
+++..++.+|...+++ .+ ..+.|+..++ .+. +..++++|+||+++|+|+|+++| .++++
T Consensus 374 l~~~~v~~~l~~~l~~~~~~iv~~~d~G~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~G~ala-----------~~~~~ 442 (565)
T 2nxw_A 374 IAPMDIARAVNDRVRAGQEPLLIAADMGDCLFTAMDMIDAGLMAPGYYAGMGFGVPAGIGAQCV-----------SGGKR 442 (565)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCEEEECSSHHHHHHTTSCCSCEECCTTTCCTTCHHHHHHHHHHH-----------TTTCC
T ss_pred cCHHHHHHHHHHhcccccCCEEEEecchHHHHHHHhCCCcEEEccCccccccccchHHHHHHHh-----------CCCCc
Confidence 7889999888876653 34 5677753221 111 22356789999999999999999 67889
Q ss_pred EEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeeccccc-----ccccChhhhhhcccCCCcEEEecCCCHHH
Q 019523 132 TLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHL-----RATSDPQIYKKGPAFGMPGFHVDGMDVLK 205 (339)
Q Consensus 132 vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~~-----~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~ 205 (339)
|||++|||+|+++ +++|++|.++++|+++||.|| +|++....+ .....+|+.+++++||+++++|++. .+
T Consensus 443 vv~i~GDG~~~~~--~~~l~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~--~e 518 (565)
T 2nxw_A 443 ILTVVGDGAFQMT--GWELGNCRRLGIDPIVILFNNASWEMLRTFQPESAFNDLDDWRFADMAAGMGGDGVRVRTR--AE 518 (565)
T ss_dssp EEEEEEHHHHHHH--GGGGGGHHHHTCCCEEEEEECSBCHHHHHHCTTCGGGBCCCCCHHHHTGGGTSEEEEECBH--HH
T ss_pred EEEEEechHHHhh--HHHHHHHHHhCCCCEEEEEECCCCcEEeeecccCCCCcCCCCCHHHHHHHcCCCEEEeCCH--HH
Confidence 9999999999987 899999999999987777777 566632211 1224579999999999999999854 46
Q ss_pred HHHHHHHHHHHHHcCCCCE-EEEEEEee
Q 019523 206 VREVAKEAIERARRGEGPT-LVECETYR 232 (339)
Q Consensus 206 v~~a~~~A~~~ar~~~gP~-lIev~t~r 232 (339)
+.+ +++++.+.++|+ |||+.|++
T Consensus 519 l~~----al~~a~~~~gp~~liev~~~~ 542 (565)
T 2nxw_A 519 LKA----ALDKAFATRGRFQLIEAMIPR 542 (565)
T ss_dssp HHH----HHHHHHHCCSSCEEEEEECCT
T ss_pred HHH----HHHHHHhcCCCeEEEEEEccc
Confidence 555 555555667898 99999875
No 40
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=99.73 E-value=1.4e-18 Score=176.45 Aligned_cols=154 Identities=15% Similarity=0.104 Sum_probs=113.1
Q ss_pred CCCHHHHHHHhhCCC--CC--CCcCCCCcccc-----cc--CC--CcccccccccccchHHHHHHHHHHHHhhhhhhccC
Q 019523 61 GVPARAVMSELFGKA--TG--CCRGQGGSMHM-----FS--KE--HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD 127 (339)
Q Consensus 61 g~~p~~~~~el~~~~--~~--~~~g~~G~~h~-----~~--~~--~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~ 127 (339)
.+++..++..|...+ ++ .+..++|+... +. .+ +..+++.|+||+++|+|+|+++|
T Consensus 374 ~~~~~~~~~~l~~~l~~~~~~iv~~dg~~~~~~~~~~~~~~~p~~~~~~g~~g~~G~~l~~AiGaala------------ 441 (568)
T 2c31_A 374 MMNYSNSLGVVRDFMLANPDISLVNEGANALDNTRMIVDMLKPRKRLDSGTWGVMGIGMGYCVAAAAV------------ 441 (568)
T ss_dssp CBCHHHHHHHHHHHHHHCCSSEEEEESSHHHHHHHHHCCCCSTTCEEESTTTTCSSCHHHHHHHHHHH------------
T ss_pred CcCHHHHHHHHHHHhcCCCCeEEEECChhHHHHHHHHhcccCCCeEEcCCCCccccccHHHHHHHHhC------------
Confidence 367888888888776 43 23445553211 11 11 22467889999999999999998
Q ss_pred CCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCC-eeeccccc----c----cccChhhhhhcccCCCcEEEe
Q 019523 128 CDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL----R----ATSDPQIYKKGPAFGMPGFHV 198 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~-~~i~~~~~----~----~~~~~d~~~~a~a~G~~~~~V 198 (339)
++++|||++|||+|+++ +++|+++.++++|+++||.||+ |......+ . ....+|+.+++++||+++++|
T Consensus 442 ~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v 519 (568)
T 2c31_A 442 TGKPVIAVEGDSAFGFS--GMELETICRYNLPVTVIIMNNGGIYKGNEADPQPGVISCTRLTRGRYDMMMEAFGGKGYVA 519 (568)
T ss_dssp HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEESSBSSCSCCCCSBTTBCCTTBCCCCCHHHHHHTTTCEEEEE
T ss_pred CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHHHHHHhhcCCcccCcCCCCCHHHHHHHcCCeEEEe
Confidence 46789999999999998 8999999999999999998886 21122111 0 024579999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCC
Q 019523 199 DGMDVLKVREVAKEAIERARRGEGPTLVECETYRFR 234 (339)
Q Consensus 199 dg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~ 234 (339)
++ +.++.++++ ++.+.++|+|||+.|+|..
T Consensus 520 ~~--~~el~~al~----~a~~~~~p~liev~~~~~~ 549 (568)
T 2c31_A 520 NT--PAELKAALE----EAVASGKPCLINAMIDPDA 549 (568)
T ss_dssp SS--HHHHHHHHH----HHHHHTSCEEEEEEBCTTS
T ss_pred CC--HHHHHHHHH----HHHhCCCCEEEEEEecccc
Confidence 74 456665554 4445689999999998754
No 41
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=99.72 E-value=4.1e-18 Score=172.83 Aligned_cols=154 Identities=17% Similarity=0.133 Sum_probs=112.6
Q ss_pred CCCHHHHHHHhhCCC--CC-C-CcCCCCcccc-----ccC--C--CcccccccccccchHHHHHHHHHHHHhhhhhhccC
Q 019523 61 GVPARAVMSELFGKA--TG-C-CRGQGGSMHM-----FSK--E--HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD 127 (339)
Q Consensus 61 g~~p~~~~~el~~~~--~~-~-~~g~~G~~h~-----~~~--~--~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~ 127 (339)
.+++..++.+|...+ ++ . +..++++... +.. + +..++++|+||+++|+|+|+++|
T Consensus 369 ~~~~~~~~~~l~~~l~~~~d~ivv~dg~~~~~~~~~~~~~~~p~~~~~~g~~g~~G~~l~~AiGaa~a------------ 436 (564)
T 2q28_A 369 PLNYFNALSAVRDVLRENQDIYLVNEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVT------------ 436 (564)
T ss_dssp SBCHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHSCCCSSSCEEESTTTTCTTCHHHHHHHHHHH------------
T ss_pred CcCHHHHHHHHHHHhcCCCCEEEEECCchHHHHHHHHhcccCCCeEecCCCCCcccchHHHHHHHhhc------------
Confidence 377888988888766 43 2 3344443211 111 1 22367889999999999999998
Q ss_pred CCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCC-e-eeccccc-------c---cccChhhhhhcccCCCcE
Q 019523 128 CDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-W-AIGMSHL-------R---ATSDPQIYKKGPAFGMPG 195 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~-~-~i~~~~~-------~---~~~~~d~~~~a~a~G~~~ 195 (339)
++++|||++|||+|+++ .++|.+|+++++|+++||.||+ | .+ ...+ . ....+|+.+++++||+++
T Consensus 437 ~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~ 513 (564)
T 2q28_A 437 SGSPVVAIEGDSAFGFS--GMEIETICRYNLPVTIVIFNNGGIYRG-DGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVG 513 (564)
T ss_dssp HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEECSBSSCS-CCCCTTSSCCCCTTBCCTTCCGGGGGGGGTCEE
T ss_pred CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHH-HHHHHhccCCccccccCCCCCHHHHHHHcCCeE
Confidence 46789999999999997 7999999999999999998886 3 33 2111 0 112579999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCC
Q 019523 196 FHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRG 235 (339)
Q Consensus 196 ~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~g 235 (339)
++|++ +.++.++++ ++++.++|+|||+.|+|...
T Consensus 514 ~~v~~--~~el~~al~----~a~~~~~p~liev~~~~~~~ 547 (564)
T 2q28_A 514 YNVTT--TDELRHALT----TGIQSRKPTIINVVIDPAAG 547 (564)
T ss_dssp EEECS--HHHHHHHHH----HHHHHTSCEEEEEEBCTTSS
T ss_pred EEeCC--HHHHHHHHH----HHHhCCCCEEEEEEeccccC
Confidence 99975 456655554 44456899999999987543
No 42
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=99.70 E-value=1.1e-18 Score=178.57 Aligned_cols=152 Identities=14% Similarity=-0.017 Sum_probs=112.2
Q ss_pred CCCHHHHHHHhhCCCCC--CCcCCCCccccc-----cC---CCc--ccccccccccchHHHHHHHHHHHHhhhhhhccCC
Q 019523 61 GVPARAVMSELFGKATG--CCRGQGGSMHMF-----SK---EHN--LLGGFAFIGEGIPVATGAAFTSKYRREVLKEADC 128 (339)
Q Consensus 61 g~~p~~~~~el~~~~~~--~~~g~~G~~h~~-----~~---~~~--~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~ 128 (339)
.++|..++.+|...+++ .+..+.|....+ .. +.. .+.+.+.||+++|.|+|+++| +
T Consensus 404 ~~~~~~~~~~L~~~lp~d~iv~~d~g~~~~~~~~~~~~~~~~~~~~~~~G~~~ig~~l~~AiGaala------------~ 471 (604)
T 2x7j_A 404 VSFEGNLYRILQHLVPENSSLFVGNSMPIRDVDTFFEKQDRPFRIYSNRGANGIDGVVSSAMGVCEG------------T 471 (604)
T ss_dssp TTSHHHHHHHHHHHSCTTCEEEECTTHHHHHHHHHCCCBSCCCEEECCTTTCCSSSHHHHHHHHHHH------------H
T ss_pred CCCHHHHHHHHHHhCCCCCEEEEECCHHHHHHHHhcccCCCCceEEeCCCcCCcCcHHHHHHHHHhc------------C
Confidence 47899999999888764 234455543222 11 122 245667899999999999998 3
Q ss_pred CcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcC-Ceeecccc-ccc-----------ccChhhhhhcccCCCcE
Q 019523 129 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSH-LRA-----------TSDPQIYKKGPAFGMPG 195 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN-~~~i~~~~-~~~-----------~~~~d~~~~a~a~G~~~ 195 (339)
+++|||++|||+|+++ +++|++|+++++|+++||.|| +|++.... ..| ...+|+.+++++||+++
T Consensus 472 ~~~vv~i~GDGsf~~~--~~eL~ta~~~~lp~~ivv~NN~~~~i~~~~~~~q~~~~~~~~~~~~~~~d~~~~a~a~G~~~ 549 (604)
T 2x7j_A 472 KAPVTLVIGDLSFYHD--LNGLLAAKKLGIPLTVILVNNDGGGIFSFLPQASEKTHFEDLFGTPTGLDFKHAAALYGGTY 549 (604)
T ss_dssp TSCEEEEEEHHHHHHT--GGGGHHHHHHCCCEEEEEEECSSCGGGGGSGGGSCHHHHHHHTTCCCCCCTHHHHHHTTCEE
T ss_pred CCcEEEEEccHHHHhH--HHHHHHhhhcCCCeEEEEEeCCCCcccccCCCCccchhhHhhccCCCCCCHHHHHHHcCCeE
Confidence 6789999999999998 788999999999988877776 67663211 111 13569999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEee
Q 019523 196 FHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 232 (339)
Q Consensus 196 ~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r 232 (339)
++|++ +.++. ++++++++.++|+|||+.|++
T Consensus 550 ~~v~~--~~el~----~al~~a~~~~gp~liev~~~~ 580 (604)
T 2x7j_A 550 SCPAS--WDEFK----TAYAPQADKPGLHLIEIKTDR 580 (604)
T ss_dssp ECCSS--HHHHH----HHCCCCCSSCCEEEEEEECCH
T ss_pred EecCC--HHHHH----HHHHHHHhCCCCEEEEEECCc
Confidence 99985 44554 456666667899999998864
No 43
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=99.70 E-value=6.1e-18 Score=171.39 Aligned_cols=151 Identities=15% Similarity=0.112 Sum_probs=108.3
Q ss_pred CCCHHHHHHHhhCCCCCC--CcCCCCcc-cc---c---cCCCcc---cccccccccchHHHHHHHHHHHHhhhhhhccCC
Q 019523 61 GVPARAVMSELFGKATGC--CRGQGGSM-HM---F---SKEHNL---LGGFAFIGEGIPVATGAAFTSKYRREVLKEADC 128 (339)
Q Consensus 61 g~~p~~~~~el~~~~~~~--~~g~~G~~-h~---~---~~~~~~---~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~ 128 (339)
.++|..++.+|...+++. +....+.. .. + .....+ .+..|++|+ +|+|+|+++| +
T Consensus 366 ~~~~~~~~~~l~~~l~~~~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~G~-l~~A~Gaa~a------------~ 432 (556)
T 3hww_A 366 AFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGL-LSTAAGVQRA------------S 432 (556)
T ss_dssp SSSHHHHHHTGGGTCCTTCEEEECSSHHHHHHHHHCCCCTTCCEEECCSSCCSSSH-HHHHHHHHHH------------H
T ss_pred CcCHHHHHHHHHHhCCCCCeEEEeCCcHHHHHHHhccCCCCceEEecCcccccccH-HHHHHHHHhc------------C
Confidence 478999999999888752 22222211 01 1 111222 256677788 9999999998 3
Q ss_pred CcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCC-eeecccc-------c---ccccChhhhhhcccCCCcEEE
Q 019523 129 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSH-------L---RATSDPQIYKKGPAFGMPGFH 197 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~-~~i~~~~-------~---~~~~~~d~~~~a~a~G~~~~~ 197 (339)
+++|||++|||+|+|+ .++|++|.++++|+++||.||+ |++.... . .....+|+.++|++||+++++
T Consensus 433 ~~~vv~i~GDGsf~~~--~~eL~ta~~~~lpv~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~ 510 (556)
T 3hww_A 433 GKPTLAIVGDLSALYD--LNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHR 510 (556)
T ss_dssp CCCEEEEEEHHHHHHT--GGGHHHHTTCSSCEEEEEEESCC-----------------CCCCCCCCSHHHHHHTTCEEEC
T ss_pred CCcEEEEEccHHhhhc--chhhHhhcccCCCcEEEEEECCCCCcccCCCCcchhHHHhccCCCCCCHHHHHHHcCCcEEe
Confidence 6789999999999988 8899999999999999998886 4442210 0 012467999999999999999
Q ss_pred ecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEee
Q 019523 198 VDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 232 (339)
Q Consensus 198 Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r 232 (339)
|++.+ ++ .++++++++.+||+|||+.|++
T Consensus 511 v~~~~--~l----~~al~~a~~~~gp~liev~~~~ 539 (556)
T 3hww_A 511 PQNWQ--EL----ETAFADAWRTPTTTVIEMVVND 539 (556)
T ss_dssp CSSHH--HH----HHHHHHHTTSSSEEEEEEECCS
T ss_pred cCCHH--HH----HHHHHHHHhCCCCEEEEEECCc
Confidence 97653 44 5567777788999999998864
No 44
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=99.62 E-value=7e-17 Score=164.31 Aligned_cols=152 Identities=18% Similarity=0.146 Sum_probs=99.1
Q ss_pred CCCHHHHHHHhhCCCCC--CCcCCCCcc-----cccc--C-CCccccccc--ccccchHHHHHHHHHHHHhhhhhhccCC
Q 019523 61 GVPARAVMSELFGKATG--CCRGQGGSM-----HMFS--K-EHNLLGGFA--FIGEGIPVATGAAFTSKYRREVLKEADC 128 (339)
Q Consensus 61 g~~p~~~~~el~~~~~~--~~~g~~G~~-----h~~~--~-~~~~~~~~g--~lG~~~p~AiG~a~A~k~~~~~~~~~~~ 128 (339)
.++|..++.+|...+++ .+..+.|.. .++. . ...+....| .+|+++|.|+|+++ +
T Consensus 385 ~~~~~~~~~~l~~~l~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~~g~l~~AiGaa~-------------~ 451 (578)
T 3lq1_A 385 ILEEGKIVAELRRLLPDKAGLFIGNSMPIRDVDTYFSQIDKKIKMLANRGANGIDGVVSSALGASV-------------V 451 (578)
T ss_dssp --CTTHHHHHHHHHSCSEEEEEECSSHHHHHHHHHCCCCSSEEEEECCCSSCCSSSHHHHHHHHTT-------------T
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEeCccHHHHHHHhhcccCCCceEEeCCCccccccHHHHHHHHhc-------------C
Confidence 36778888888887764 222333321 1221 1 112222223 34447999999963 4
Q ss_pred CcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCC-eeecccc-ccc-----------ccChhhhhhcccCCCcE
Q 019523 129 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSH-LRA-----------TSDPQIYKKGPAFGMPG 195 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~-~~i~~~~-~~~-----------~~~~d~~~~a~a~G~~~ 195 (339)
+++|||++|||+|+|+ .++|++|+++++|+++||.||+ |++.... +.+ ...+||.++|++||+++
T Consensus 452 ~~~vv~i~GDGsf~~~--~~eL~ta~~~~l~~~ivv~NN~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~ 529 (578)
T 3lq1_A 452 FQPMFLLIGDLSFYHD--MNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQANEPKYFESLFGTSTELDFRFAAAFYDADY 529 (578)
T ss_dssp SSSEEEEEEHHHHHHT--GGGGHHHHHTTCCEEEEEECCC-------------------------CCCTHHHHHHTTCEE
T ss_pred CCCEEEEEchHHHHhh--HHHHHhhccCCCCeEEEEEECCcCccccccccccccchhhhhccCCCCCCHHHHHHHcCCce
Confidence 7889999999999988 8999999999999999998884 5553211 111 12469999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeC
Q 019523 196 FHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRF 233 (339)
Q Consensus 196 ~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~ 233 (339)
++|++. .++ .++++++++.++|+|||+.|.+.
T Consensus 530 ~~v~~~--~el----~~al~~a~~~~gp~liev~~~~~ 561 (578)
T 3lq1_A 530 HEAKSV--DEL----EEAIDKASYHKGLDIIEVKTNRH 561 (578)
T ss_dssp EECCSH--HHH----HHHHHHHTTSSSEEEEEEC----
T ss_pred EecCCH--HHH----HHHHHHHHhCCCCEEEEEECCcc
Confidence 999754 455 45666777789999999988764
No 45
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=99.55 E-value=1.1e-14 Score=151.38 Aligned_cols=131 Identities=17% Similarity=0.176 Sum_probs=112.8
Q ss_pred CcccccccccccchHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccch---HHHHHHHHHhCCCC-EEEEEEcCC
Q 019523 93 HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQ---FFECLNMAALWKLP-IVFVVENNL 168 (339)
Q Consensus 93 ~~~~~~~g~lG~~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~---~~eal~~A~~~~Lp-vi~vv~NN~ 168 (339)
.++....|+||++++.|+|+|+. +++.+|+|++|||+..+|. .||+..++..++|. |+.|+++|+
T Consensus 168 pGve~~tG~LGqGls~AvG~A~~-----------~~~~~v~~~~GDGe~e~GsLAg~wea~~~~~~~~l~nl~~i~D~N~ 236 (845)
T 3ahc_A 168 PGSIHEGGELGYALSHAYGAVMN-----------NPSLFVPCIIGDGEAETGPLATGWQSNKLVNPRTDGIVLPILHLNG 236 (845)
T ss_dssp TTCSCCCSSTTCHHHHHHHHHTT-----------CTTCEEEEEEETTGGGSHHHHHHGGGGGSCCTTTSCEEEEEEEECS
T ss_pred CCeecCCCCccchHhHHhhhhhc-----------CCCCeEEEEECCCchhhhcchhhhHHhhhhhhhcCCCEEEEEECCC
Confidence 35667789999999999999975 6889999999999999998 88888889999998 889999999
Q ss_pred eeeccccccc-ccChhhhhhcccCCCcEE-EecC-C--CHHHHHHHHHHHHHH-----------HHc--CCCC--EEEEE
Q 019523 169 WAIGMSHLRA-TSDPQIYKKGPAFGMPGF-HVDG-M--DVLKVREVAKEAIER-----------ARR--GEGP--TLVEC 228 (339)
Q Consensus 169 ~~i~~~~~~~-~~~~d~~~~a~a~G~~~~-~Vdg-~--d~~~v~~a~~~A~~~-----------ar~--~~gP--~lIev 228 (339)
|.|+.++... .+..++.+++++|||.++ .||| + |+.++..++.+|++. +++ .++| ++|.+
T Consensus 237 ~~i~g~t~l~~~~~e~l~~rf~a~Gw~v~~~vdG~~~~D~~~i~~a~~~al~~~~~~i~~i~~~A~~~~~~kP~w~~Ii~ 316 (845)
T 3ahc_A 237 YKIANPTILARISDEELHDFFRGMGYHPYEFVAGFDNEDHMSIHRRFAELFETIFDEICDIKAAAQTDDMTRPFYPMLIF 316 (845)
T ss_dssp BSSSSBCHHHHSCHHHHHHHHHHTTEEEEEEECSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCEEEEEE
T ss_pred CcCCCCccccccCcHHHHHHHHHCCCEEeEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCeEEEE
Confidence 9998877643 346789999999999999 9999 8 999999887766633 444 3689 99999
Q ss_pred EEeeCC
Q 019523 229 ETYRFR 234 (339)
Q Consensus 229 ~t~r~~ 234 (339)
+|.+++
T Consensus 317 rT~kG~ 322 (845)
T 3ahc_A 317 RTPKGW 322 (845)
T ss_dssp ECCTTT
T ss_pred ECcccC
Confidence 999999
No 46
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.45 E-value=1.1e-13 Score=150.63 Aligned_cols=161 Identities=15% Similarity=0.165 Sum_probs=104.0
Q ss_pred CcEEEEEeCCC-CcccchHHHHHHHHHhCCCCEEEEEEcCC-eeeccccccc-----------------ccChhhhhhcc
Q 019523 129 DHVTLAFFGDG-TCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHLRA-----------------TSDPQIYKKGP 189 (339)
Q Consensus 129 ~~~vv~~~GDG-~~~~g~~~eal~~A~~~~Lpvi~vv~NN~-~~i~~~~~~~-----------------~~~~d~~~~a~ 189 (339)
++.|||+.||| +++|| .++|.+|.++++||++||.||+ |++... +.. ...+|+.++|+
T Consensus 953 ~~~Vv~i~GDG~~~~mg--~~eL~ta~~~~~~v~iiVlnN~~yg~tg~-Q~s~~t~~~~~t~~~~~g~~~~~~D~~~iA~ 1029 (1231)
T 2c42_A 953 KKSVWIFGGDGWAYDIG--YGGLDHVLASGEDVNVFVMDTEVYSNTGG-QSSKATPTGAVAKFAAAGKRTGKKDLARMVM 1029 (1231)
T ss_dssp CCEEEEEEEHHHHHTTT--HHHHHHHHHTTCSCEEEEEECSSBTTTTC-BCCTTSCTTCCBBTBTTCCSSCCCCHHHHHH
T ss_pred CCcEEEEeCcHHHHHcc--hHHHHHHHHhCCCeEEEEEECHHHHhHHh-hhccCCCCCceeeecccCCCCCchhHHHHHH
Confidence 57999999999 89999 9999999999999999999997 333221 111 01369999999
Q ss_pred cCCCcEEEe-cC-CCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCC-CC--CCCCC-------------CCCC-CHHHH
Q 019523 190 AFGMPGFHV-DG-MDVLKVREVAKEAIERARRGEGPTLVECETYRFR-GH--SLADP-------------DELR-DPAEK 250 (339)
Q Consensus 190 a~G~~~~~V-dg-~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~-gh--~~~D~-------------~~yr-~~~e~ 250 (339)
+||++++++ .- .++.++.+++++ |.+.+||+||++.+.... |. .+.+. +.|| .|.-.
T Consensus 1030 a~G~~~va~~~v~~~~~~l~~al~e----Al~~~GP~lI~v~~~c~~~~~~~~~~~~~~~~k~av~~~~wpl~~~~p~~~ 1105 (1231)
T 2c42_A 1030 TYGYVYVATVSMGYSKQQFLKVLKE----AESFPGPSLVIAYATCINQGLRKGMGKSQDVMNTAVKSGYWPLFRYDPRLA 1105 (1231)
T ss_dssp TTSSSEEEEECTTTCHHHHHHHHHH----HHHSSSCEEEEEECCCGGGCBTTCGGGHHHHHHHHHHTTSSCCEEECHHHH
T ss_pred HCCCCEEEEEeccCCHHHHHHHHHH----HHhcCCCEEEEEeecCcccCCCCChHHHHHHHHhccccCCceeEEeccchh
Confidence 999999954 34 477777665555 446799999999876553 22 11100 1232 22111
Q ss_pred HH----H--hh---CChHHHHHHHHHHcCcc---cHHH----HHHHHHHHHHHHHHHHHHhh
Q 019523 251 AR----Y--AA---RDPITALKKYLIESSLA---SEAE----LKAIEKKIDEVVEDAVEFAD 296 (339)
Q Consensus 251 ~~----~--~~---~dPl~~~~~~L~~~g~~---~~~~----~~~i~~~~~~~v~~a~~~a~ 296 (339)
+. + .. +.|+..|-+...++..+ .+++ +++++++++++++...+.|.
T Consensus 1106 ~~g~~~~~l~~~~~~~~~~~~l~~e~r~~~l~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 1167 (1231)
T 2c42_A 1106 AQGKNPFQLDSKAPDGSVEEFLMAQNRFAVLDRSFPEDAKRLRAQVAHELDVRFKELEHMAA 1167 (1231)
T ss_dssp HTTSCSEEECSCSCCSCHHHHHHTBHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCeeecCCCCCcCHHHHHHhhhHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11 1 11 23555554444444444 2455 66777777777777776666
No 47
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=94.03 E-value=0.36 Score=48.49 Aligned_cols=96 Identities=19% Similarity=0.091 Sum_probs=66.0
Q ss_pred CCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCee-ecccccccccChhhhhhcccCCCcEEEecCCCHHHH
Q 019523 128 CDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKV 206 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~-i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v 206 (339)
.-..++|..|=|.++. .-++..|-.-+.|||+|.-+-... ++.....| ..|... ++.+--...++. ++.++
T Consensus 68 ~p~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~Q--~~d~~~-~~~~tk~~~~v~--~~~~~ 139 (589)
T 2pgn_A 68 RSAAVGAWHCVGNLLL---HAAMQEARTGRIPAVHIGLNSDGRLAGRSEAAQ--QVPWQS-FTPIARSTQRVE--RLDKV 139 (589)
T ss_dssp SCCEEEEEEGGGGGGC---HHHHHHHHHTTCCEEEEEEESCGGGTTCTTCSS--CCCGGG-GTTTSSEEEECC--SGGGH
T ss_pred CCEEEEEecCchHHHH---HHHHHHHHhcCCCEEEEecCCcccccCCCCccc--ccChhh-ccccEEEEeecC--CHHHH
Confidence 3457888889998875 558899999999999998765422 22110122 234445 566655566775 44477
Q ss_pred HHHHHHHHHHHHcCC-CCEEEEEEEe
Q 019523 207 REVAKEAIERARRGE-GPTLVECETY 231 (339)
Q Consensus 207 ~~a~~~A~~~ar~~~-gP~lIev~t~ 231 (339)
.+.+.+|+..+..++ ||+.|++...
T Consensus 140 ~~~i~~A~~~A~~~~~GPV~l~iP~d 165 (589)
T 2pgn_A 140 GEAIHEAFRVAEGHPAGPAYVDIPFD 165 (589)
T ss_dssp HHHHHHHHHHHTSSSCCEEEEEEETH
T ss_pred HHHHHHHHHHHhcCCCccEEEEeCHh
Confidence 788899999998876 9999998543
No 48
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=93.92 E-value=0.2 Score=49.88 Aligned_cols=94 Identities=14% Similarity=0.034 Sum_probs=64.5
Q ss_pred CcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCee-ecccccccccChhhhhhcccCCCcEEEecCCCHHHHH
Q 019523 129 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVR 207 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~-i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~ 207 (339)
-..++|..|=|.++. .-++..|-.-+.|||+|.-+-... ++.. ..| ..|...+++.+--...++.. +.++.
T Consensus 67 ~~v~~~TsGpG~~N~---~~gi~~A~~~~vPvl~itg~~~~~~~~~~-~~Q--~~d~~~~~~~~tk~~~~v~~--~~~~~ 138 (549)
T 3eya_A 67 LAVCAGSCGPGNLHL---INGLFDCHRNHVPVLAIAAHIPSSEIGSG-YFQ--ETHPQELFRECSHYCELVSS--PEQIP 138 (549)
T ss_dssp CEEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEESCGGGTTSC-CTT--CCCHHHHTSTTCSEEEECCS--GGGHH
T ss_pred CEEEEeCCCCcHhhh---HHHHHHHHhhCCCEEEEeCCCchhhcCCC-CCC--ccCHHHHHhhhhheEEEeCC--HHHHH
Confidence 345566667777764 568889999999999998654311 1111 112 23566777777666677754 44777
Q ss_pred HHHHHHHHHHHcCCCCEEEEEEE
Q 019523 208 EVAKEAIERARRGEGPTLVECET 230 (339)
Q Consensus 208 ~a~~~A~~~ar~~~gP~lIev~t 230 (339)
+.+.+|++.|...+||+.|++..
T Consensus 139 ~~i~~A~~~A~~~~GPV~l~iP~ 161 (549)
T 3eya_A 139 QVLAIAMRKAVLNRGVSVVVLPG 161 (549)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEEH
T ss_pred HHHHHHHHHHhhCCCCEEEEeCh
Confidence 88889999988888999999844
No 49
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=93.76 E-value=0.21 Score=49.88 Aligned_cols=96 Identities=17% Similarity=0.139 Sum_probs=64.7
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCCCHHHHHHH
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREV 209 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a 209 (339)
..+++..|=|.++. .-++..|-..++|||+|+-+-....-.....|.. .|...+++.+--...++.. +.++.+.
T Consensus 68 ~v~~~TsGpG~~N~---~~~l~~A~~~~~Pll~itg~~~~~~~~~~~~Q~~-~d~~~~~~~~tk~~~~v~~--~~~~~~~ 141 (563)
T 2uz1_A 68 GVALVTAGGGFTNA---VTPIANAWLDRTPVLFLTGSGALRDDETNTLQAG-IDQVAMAAPITKWAHRVMA--TEHIPRL 141 (563)
T ss_dssp EEEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGTTSCCTTCC-CCHHHHHGGGCSEEEECCC--GGGHHHH
T ss_pred EEEEEccCccHHHH---HHHHHHHHhcCCCEEEEeCCCCcccCCchhhhhh-ccHHHHhhhhhceEEEcCC--HHHHHHH
Confidence 34555556666663 5578888999999999987764222111111210 4666777777766777754 4478888
Q ss_pred HHHHHHHHHcCC-CCEEEEEEEe
Q 019523 210 AKEAIERARRGE-GPTLVECETY 231 (339)
Q Consensus 210 ~~~A~~~ar~~~-gP~lIev~t~ 231 (339)
+.+|+..+..++ ||+.|++...
T Consensus 142 l~~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 142 VMQAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp HHHHHHHHHSSSCCCEEEEEEHH
T ss_pred HHHHHHHhcCCCCceEEEEeCHH
Confidence 999999998866 9999998554
No 50
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=93.69 E-value=0.19 Score=50.58 Aligned_cols=107 Identities=22% Similarity=0.203 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecccccccccChhhhh
Q 019523 107 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYK 186 (339)
Q Consensus 107 p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~~~ 186 (339)
-+|.|.+.+. +.-..++|..|=|.++. .-++..|...++|||+|.-+-....-.....| ..|...
T Consensus 64 ~~A~Gyar~t----------g~p~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~g~~~~Q--~~d~~~ 128 (590)
T 1ybh_A 64 FAAEGYARSS----------GKPGICIATSGPGATNL---VSGLADALLDSVPLVAITGQVPRRMIGTDAFQ--ETPIVE 128 (590)
T ss_dssp HHHHHHHHHH----------SSCEEEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGTTTTCTT--CCCHHH
T ss_pred HHHHHHHHHH----------CCCEEEEeccCchHHHH---HHHHHHHHhhCCCEEEEeCcCCccccCCCccc--ccCHHH
Confidence 3566666552 23345566667776653 56888999999999999876532211111112 236667
Q ss_pred hcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCC-CCEEEEEEE
Q 019523 187 KGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGE-GPTLVECET 230 (339)
Q Consensus 187 ~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~-gP~lIev~t 230 (339)
+++.+--...+|.. ++++.+.+++|++.++.++ ||+.|++..
T Consensus 129 ~~~~~~k~~~~v~~--~~~i~~~l~~A~~~a~~~~~GPV~l~iP~ 171 (590)
T 1ybh_A 129 VTRSITKHNYLVMD--VEDIPRIIEEAFFLATSGRPGPVLVDVPK 171 (590)
T ss_dssp HHGGGSSEEEECCC--GGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred HHHHHhCeEEecCC--HHHHHHHHHHHHHHHhhCCCceEEEEeCc
Confidence 77777666777754 4478889999999988764 899999844
No 51
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=93.54 E-value=0.24 Score=49.92 Aligned_cols=93 Identities=16% Similarity=0.088 Sum_probs=62.5
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCC-eeecccccccccChhhhhhcccCCCcEEEecCCCHHHHHH
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVRE 208 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~-~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~ 208 (339)
..+++..|=|.++. .-++..|-.-+.|||+|+-+-. ..++.. ..| ..|...+++.+--...+|...+ ++.+
T Consensus 77 gv~~~TsGpG~~N~---~~gia~A~~~~vPvl~itG~~~~~~~~~~-~~Q--~~d~~~~~~~~tk~~~~v~~~~--~~~~ 148 (603)
T 4feg_A 77 GVCFGSAGPGGTHL---MNGLYDAREDHVPVLALIGQFGTTGMNMD-TFQ--EMNENPIYADVADYNVTAVNAA--TLPH 148 (603)
T ss_dssp EEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEECCTTTTTSC-CTT--CCCCGGGGTTTCSEEEECCCST--THHH
T ss_pred eEEEecCCchHHHH---HHHHHHHHHcCCCEEEEecCCcccccCCC-ccc--cccHHHHhhhhceEEEEcCCHH--HHHH
Confidence 45566667777764 5578899999999999886542 112211 112 2355666777766677775444 6667
Q ss_pred HHHHHHHHHHcCCCCEEEEEEE
Q 019523 209 VAKEAIERARRGEGPTLVECET 230 (339)
Q Consensus 209 a~~~A~~~ar~~~gP~lIev~t 230 (339)
.+.+|++.|...+||+.|++..
T Consensus 149 ~i~~A~~~A~~~~GPV~l~iP~ 170 (603)
T 4feg_A 149 VIDEAIRRAYAHQGVAVVQIPV 170 (603)
T ss_dssp HHHHHHHHHHHHTSEEEEEEET
T ss_pred HHHHHHHHHhcCCCCEEEEeCh
Confidence 7888888887778999999843
No 52
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=93.46 E-value=0.19 Score=50.29 Aligned_cols=94 Identities=18% Similarity=0.103 Sum_probs=63.3
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCee-ecccccccccChhhhhhcccCCCcEEEecCCCHHHHHH
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVRE 208 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~-i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~ 208 (339)
..+++..|=|.++. .-++..|-.-+.|+|+|.-+-... ++.. ..| ..|...+++.+--...+|.. +.++.+
T Consensus 75 ~v~~~TsGpG~~N~---~~~l~~A~~~~vPll~itg~~~~~~~~~~-~~Q--~~d~~~~~~~~tk~~~~v~~--~~~~~~ 146 (566)
T 1ozh_A 75 GVALVTSGPGCSNL---ITGMATANSEGDPVVALGGAVKRADKAKQ-VHQ--SMDTVAMFSPVTKYAIEVTA--PDALAE 146 (566)
T ss_dssp EEEEECSTHHHHTT---HHHHHHHHHHTCCEEEEEEECCTTTC---------CCCHHHHHGGGCSEEEECCS--GGGHHH
T ss_pred EEEEEccChHHHHH---HHHHHHHHhcCCCEEEEeCCCccccCCCC-ccc--ccCHHHHHHHHhheEEEcCC--HHHHHH
Confidence 34555567776664 557888888899999998765311 2211 112 24666777777767777754 447778
Q ss_pred HHHHHHHHHHcCC-CCEEEEEEEe
Q 019523 209 VAKEAIERARRGE-GPTLVECETY 231 (339)
Q Consensus 209 a~~~A~~~ar~~~-gP~lIev~t~ 231 (339)
.+.+|+..+..++ ||+.|++...
T Consensus 147 ~i~~A~~~A~~~r~GPV~l~iP~d 170 (566)
T 1ozh_A 147 VVSNAFRAAEQGRPGSAFVSLPQD 170 (566)
T ss_dssp HHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred HHHHHHHHHhcCCCCeEEEEeChh
Confidence 8899999888875 9999998544
No 53
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=93.31 E-value=0.4 Score=47.85 Aligned_cols=97 Identities=13% Similarity=0.147 Sum_probs=64.0
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCee-ecccc--ccc---ccChhhhhhcccCCCcEEEecCCCH
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSH--LRA---TSDPQIYKKGPAFGMPGFHVDGMDV 203 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~-i~~~~--~~~---~~~~d~~~~a~a~G~~~~~Vdg~d~ 203 (339)
..+++..|=|.++. .-++..|...++|+|+|+-+-... ++... ... ....|...+++.+--...++...+
T Consensus 67 ~v~~~TsGpG~~N~---~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~tk~~~~v~~~~- 142 (566)
T 2vbi_A 67 AAAVVTFSVGAISA---MNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAAESITDAH- 142 (566)
T ss_dssp EEEEECTTTTHHHH---HHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCTHHHHHHHTTCSEEEEECSSS-
T ss_pred eEEEEeCCCCHHHH---HHHHHHHHhhCCCEEEEECCCChHHhccCceeeeeccCcchHHHHHHHhhhEeEEEEeCCHH-
Confidence 34555557776652 557888999999999998765422 11110 000 011366777777777777886444
Q ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 019523 204 LKVREVAKEAIERARRGEGPTLVECETY 231 (339)
Q Consensus 204 ~~v~~a~~~A~~~ar~~~gP~lIev~t~ 231 (339)
++.+.+.+|+..+..++||+.|++...
T Consensus 143 -~~~~~l~~A~~~a~~~~GPV~l~iP~d 169 (566)
T 2vbi_A 143 -SAPAKIDHVIRTALRERKPAYLDIACN 169 (566)
T ss_dssp -SHHHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred -HHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 566778888888888889999998544
No 54
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=93.25 E-value=0.21 Score=50.01 Aligned_cols=95 Identities=12% Similarity=0.112 Sum_probs=64.3
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCee-ecccccccccChhhhhhcccCCCcEEEecCCCHHHHHH
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVRE 208 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~-i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~ 208 (339)
..+++..|=|.++. .-++..|..-+.|+|+|.-+.... ++.....| ..|...+++.+--...++.. +.++.+
T Consensus 75 ~v~~~TsGpG~~N~---~~~v~~A~~~~~Pll~itg~~~~~~~~~~~~~Q--~~d~~~~~~~~~k~~~~v~~--~~~~~~ 147 (573)
T 2iht_A 75 QACWATLGPGMTNL---STGIATSVLDRSPVIALAAQSESHDIFPNDTHQ--CLDSVAIVAPMSKYAVELQR--PHEITD 147 (573)
T ss_dssp EEEEECTTHHHHHH---HHHHHHHHHHTCCEEEEEEESCGGGCCTTTSTT--CCCHHHHHGGGSSEEEECCS--GGGHHH
T ss_pred EEEEEccCchHHHH---HHHHHHHHhhCCCEEEEcccCcccccCCcCccc--cCCHHHHHHhHhhEEEEcCC--HHHHHH
Confidence 34555556665552 567888889999999998776422 22101122 24666777777666777753 447778
Q ss_pred HHHHHHHHHHcCC-CCEEEEEEEe
Q 019523 209 VAKEAIERARRGE-GPTLVECETY 231 (339)
Q Consensus 209 a~~~A~~~ar~~~-gP~lIev~t~ 231 (339)
.+.+|++.+..++ ||+.|++...
T Consensus 148 ~i~~A~~~A~~~~~GPV~l~iP~d 171 (573)
T 2iht_A 148 LVDSAVNAAMTEPVGPSFISLPVD 171 (573)
T ss_dssp HHHHHHHHHTBSSCCCEEEEEEHH
T ss_pred HHHHHHHHHhcCCCceEEEEecch
Confidence 8899999888876 9999999654
No 55
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=93.08 E-value=0.48 Score=47.33 Aligned_cols=98 Identities=13% Similarity=0.114 Sum_probs=65.7
Q ss_pred CcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeee-cccc--ccc---ccChhhhhhcccCCCcEEEecCCC
Q 019523 129 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMSH--LRA---TSDPQIYKKGPAFGMPGFHVDGMD 202 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i-~~~~--~~~---~~~~d~~~~a~a~G~~~~~Vdg~d 202 (339)
...+++..|=|.++. .-++..|-..+.|||+|.-+-.... +... ... ....|...+++.+--...+|..
T Consensus 66 ~~v~~~TsGpG~~N~---~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~tk~~~~v~~-- 140 (568)
T 2wvg_A 66 AAAAVVTYSVGALSA---FDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLEMAKNITAAAEAIYT-- 140 (568)
T ss_dssp CEEEEECTTTTHHHH---HHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHHHHTTSCSCEEEECS--
T ss_pred CeEEEEeCCCCHHHH---HHHHHHHhhhCCCEEEEeCCCChhHhccCcceeeeccccchHHHHHHHHhhEeEEEEeCC--
Confidence 345566667776653 5678889999999999987754221 1110 000 0112667777877777788854
Q ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 019523 203 VLKVREVAKEAIERARRGEGPTLVECETY 231 (339)
Q Consensus 203 ~~~v~~a~~~A~~~ar~~~gP~lIev~t~ 231 (339)
+.++...+.+|++.+..++||+.|++...
T Consensus 141 ~~~~~~~l~~A~~~A~~~~GPV~l~iP~d 169 (568)
T 2wvg_A 141 PEEAPAKIDHVIKTALREKKPVYLEIACN 169 (568)
T ss_dssp GGGHHHHHHHHHHHHHHHTCCEEEEEEGG
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 34677788888888888889999999554
No 56
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=92.91 E-value=0.35 Score=48.35 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=60.9
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCe-eeccccc--ccccChh-hhhhcccCCCcEEEecCCCHHH
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLW-AIGMSHL--RATSDPQ-IYKKGPAFGMPGFHVDGMDVLK 205 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~-~i~~~~~--~~~~~~d-~~~~a~a~G~~~~~Vdg~d~~~ 205 (339)
..++|..|=|.++. .-++..|...+.|||+|+-+-.. .++.... .+....| ...+++.+--...++...+ +
T Consensus 86 ~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~~~~~q~~d~q~~~~~~~~k~~~~v~~~~--~ 160 (565)
T 2nxw_A 86 GVAAVTYGAGAFNM---VNAVAGAYAEKSPVVVISGAPGTTEGNAGLLLHHQGRTLDTQFQVFKEITVAQARLDDPA--K 160 (565)
T ss_dssp EEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEECCTTCC--CCCC-------CHHHHHHTTSCSCEEECCCTT--T
T ss_pred eEEEECCCCCHHHH---HHHHHHHHhhCCCEEEEeCCCChhhhccCcceeeeccchhhHHHHHHhhheEEEEeCCHH--H
Confidence 35555557776653 56788899999999999876431 1211110 0111223 5567777766777775433 5
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEe
Q 019523 206 VREVAKEAIERARRGEGPTLVECETY 231 (339)
Q Consensus 206 v~~a~~~A~~~ar~~~gP~lIev~t~ 231 (339)
+.+.+.+|++.+....||+.|++...
T Consensus 161 ~~~~i~~A~~~A~~~~GPV~l~iP~D 186 (565)
T 2nxw_A 161 APAEIARVLGAARAQSRPVYLEIPRN 186 (565)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEGG
T ss_pred HHHHHHHHHHHHHhCCCCEEEECChh
Confidence 66677888888877789999999643
No 57
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=92.86 E-value=0.12 Score=49.52 Aligned_cols=108 Identities=18% Similarity=0.157 Sum_probs=60.0
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCC-eeecccccccccChh
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHLRATSDPQ 183 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~-~~i~~~~~~~~~~~d 183 (339)
.+.+|+|++++ ..+.++...|.|-..+ .+.|..++...+|+|+++-+.. .+.+.+...+.+. .
T Consensus 76 a~~~a~Gaa~a------------G~r~~~~ts~~G~~~~---~d~l~~aa~~~~P~Vi~~~~~~~~~~g~~~~~~~sd-~ 139 (395)
T 1yd7_A 76 SIAAAIGASWA------------GAKAMTATSGPGFSLM---QENIGYAVMTETPVVIVDVQRSGPSTGQPTLPAQGD-I 139 (395)
T ss_dssp HHHHHHHHHHT------------TCCEEEEEETTHHHHH---TTTCC----CCCCEEEEEEC------------------
T ss_pred HHHHHHHHHHh------------CCcEEEEeCchHHHHH---HHHHHHHHhcCCCEEEEEeeCCCCCCCCCcccchhH-H
Confidence 45667787776 3456777778886553 4556677788999888887764 2212111111111 1
Q ss_pred hhhhcc---cCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEE
Q 019523 184 IYKKGP---AFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECET 230 (339)
Q Consensus 184 ~~~~a~---a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t 230 (339)
+..+.. .+|++++. -.++.+++.-+..|++.+.+.+.|+++....
T Consensus 140 ~~~~~~~~g~~g~~vl~--p~~~qea~~l~~~A~~lA~~~~~PVi~~~~~ 187 (395)
T 1yd7_A 140 MQAIWGTHGDHSLIVLS--PSTVQEAFDFTIRAFNLSEKYRTPVILLTDA 187 (395)
T ss_dssp ---------CCCCEEEC--CCSHHHHHHHHHHHHHHHHHHTSEEEEEECH
T ss_pred HHHHhccCCCcceEEEe--CCCHHHHHHHHHHHHHHHHHHCCCEEEEcch
Confidence 111222 23565554 4567788888899999888888999987744
No 58
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=92.80 E-value=0.31 Score=50.04 Aligned_cols=93 Identities=23% Similarity=0.196 Sum_probs=63.7
Q ss_pred CcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCee-ecccccccccChhhhhhcccCCCcEEEecCCCHHHHH
Q 019523 129 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVR 207 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~-i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~ 207 (339)
-..++|..|=|+++. .-++..|-.-++|||+|+-+-... ++.. ..| ..|...+++.+--...+|. ++.++.
T Consensus 146 pgvv~~TsGpG~~N~---~~gia~A~~d~vPllvItG~~~~~~~g~~-a~Q--~~Dq~~i~~~~tk~~~~v~--~~~~i~ 217 (677)
T 1t9b_A 146 PGVVLVTSGPGATNV---VTPMADAFADGIPMVVFTGQVPTSAIGTD-AFQ--EADVVGISRSCTKWNVMVK--SVEELP 217 (677)
T ss_dssp CEEEEECSTHHHHTT---HHHHHHHHHHTCCEEEEEEECCTTTTTSC-CTT--CCCHHHHTGGGSSEEEECC--SGGGHH
T ss_pred CEEEEECCChHHHHH---HHHHHHHHHcCCCEEEEeCCCChhhcCCC-Ccc--ccCHHHHhhhheeEEEEcC--CHHHHH
Confidence 345666667776663 557888888999999998765311 1111 112 2355666666666667775 445888
Q ss_pred HHHHHHHHHHHcC-CCCEEEEEE
Q 019523 208 EVAKEAIERARRG-EGPTLVECE 229 (339)
Q Consensus 208 ~a~~~A~~~ar~~-~gP~lIev~ 229 (339)
+.+.+|++.|..+ .||++|++.
T Consensus 218 ~~i~~A~~~A~~grpGPV~l~lP 240 (677)
T 1t9b_A 218 LRINEAFEIATSGRPGPVLVDLP 240 (677)
T ss_dssp HHHHHHHHHHHSSSCCEEEEEEE
T ss_pred HHHHHHHHHHhhCCCceEEEEcC
Confidence 8899999999886 589999996
No 59
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=92.20 E-value=0.45 Score=47.92 Aligned_cols=97 Identities=13% Similarity=0.049 Sum_probs=63.3
Q ss_pred CcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCee-ecccccccccChhhhhhcccCCCcEEEecCCCH----
Q 019523 129 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDV---- 203 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~-i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~---- 203 (339)
-.+++|..|=|.++. .-++..|-.-+.|||+|.-+-... ++.. ..| ..|...+++.+--....|...+-
T Consensus 95 pgv~~~TsGpG~~N~---~~gia~A~~~~vPlv~ItG~~~~~~~g~~-~~Q--~~d~~~~~~~~tk~~~~v~~~~~~~~~ 168 (604)
T 2x7j_A 95 PVLLICTSGTAAANF---YPAVVEAHYSRVPIIVLTADRPHELREVG-APQ--AINQHFLFGNFVKFFTDSALPEESPQM 168 (604)
T ss_dssp CEEEEECSSHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGSSSC-CTT--CCCCTTTTGGGSSCEEECCCCCCSHHH
T ss_pred CEEEEECChhHHHHH---HHHHHHHhhcCCCEEEEeCCCCHHHhCCC-CCC--cCcHHHHhhhheeeeeecCCCcccchh
Confidence 345666667777663 557888999999999998765321 1111 112 23555666666666777754431
Q ss_pred -HHHHHHHHHHHHHHHc-CCCCEEEEEEEe
Q 019523 204 -LKVREVAKEAIERARR-GEGPTLVECETY 231 (339)
Q Consensus 204 -~~v~~a~~~A~~~ar~-~~gP~lIev~t~ 231 (339)
..+.+.+++|+..|.. ..||+.|++...
T Consensus 169 ~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 198 (604)
T 2x7j_A 169 LRYIRTLASRAAGEAQKRPMGPVHVNVPLR 198 (604)
T ss_dssp HHHHHHHHHHHHHHHHSSSCCEEEEEEECC
T ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEcccC
Confidence 0166778889988887 469999999654
No 60
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=91.72 E-value=0.69 Score=46.66 Aligned_cols=93 Identities=20% Similarity=0.154 Sum_probs=62.6
Q ss_pred EEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCCCHHHHHHHH
Q 019523 131 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVA 210 (339)
Q Consensus 131 ~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~ 210 (339)
++++..|=|.++. .-++..|..-+.|+|+|+-+-..........| ..|...+++.+--...++.. +.++...+
T Consensus 94 v~~~TsGpG~~N~---~~~l~~A~~~~vPlvvItg~~p~~~~~~~~~Q--~~d~~~~~~~~tk~~~~v~~--~~~i~~~l 166 (616)
T 2pan_A 94 VCLGTSGPAGTDM---ITALYSASADSIPILCITGQAPRARLHKEDFQ--AVDIEAIAKPVSKMAVTVRE--AALVPRVL 166 (616)
T ss_dssp EEEECSTHHHHTS---HHHHHHHHHTTCCEEEEEEECCGGGTTTTCTT--CCCHHHHHGGGSSEEEECCS--GGGHHHHH
T ss_pred EEEeCCCchHHHH---HHHHHHHHhcCCCEEEEecCCcccccCccccc--ccCHHHHHHHHHHhhcccCC--HHHHHHHH
Confidence 4445566666653 55788899999999999876642221111112 34566777777666677743 45777888
Q ss_pred HHHHHHHHcC-CCCEEEEEEE
Q 019523 211 KEAIERARRG-EGPTLVECET 230 (339)
Q Consensus 211 ~~A~~~ar~~-~gP~lIev~t 230 (339)
++|++.+..+ .||+.|++..
T Consensus 167 ~~A~~~A~~~r~GPV~l~iP~ 187 (616)
T 2pan_A 167 QQAFHLMRSGRPGPVLVDLPF 187 (616)
T ss_dssp HHHHHHHHSSSCCCEEEEEEH
T ss_pred HHHHHHHhcCCCceEEEEcch
Confidence 9999988876 4899999844
No 61
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=91.50 E-value=0.58 Score=46.24 Aligned_cols=109 Identities=17% Similarity=0.066 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecccccccccChhhhh
Q 019523 107 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYK 186 (339)
Q Consensus 107 p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~~~ 186 (339)
-+|.|.+.+. +....+++..|=|.++. .-++..|...+.|||+|.-+-....-.....|. ..|...
T Consensus 52 ~~A~Gyar~t----------g~~~v~~~tsGpG~~N~---~~~l~~A~~~~~Pll~itg~~~~~~~~~~~~q~-~~d~~~ 117 (528)
T 1q6z_A 52 GIADGYAQAS----------RKPAFINLHSAAGTGNA---MGALSNAWNSHSPLIVTAGQQTRAMIGVEALLT-NVDAAN 117 (528)
T ss_dssp HHHHHHHHHH----------TSCEEEEEEHHHHHHHT---HHHHHHHHHTTCCEEEEEEECCHHHHTTTCTTC-CTTGGG
T ss_pred HHHHHHHHHh----------CCCEEEEEcCChHHHHH---HHHHHHHhhcCCCEEEEeCCCcccccCCCcccc-cccHHH
Confidence 3566666552 23345566667777653 557888999999999997765321111111121 136666
Q ss_pred hcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCC-CCEEEEEEEe
Q 019523 187 KGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGE-GPTLVECETY 231 (339)
Q Consensus 187 ~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~-gP~lIev~t~ 231 (339)
+++.+--...++.. +.++...+.+|+..+..++ ||+.|++...
T Consensus 118 ~~~~~~k~~~~v~~--~~~~~~~i~~A~~~a~~~~~GPV~l~iP~d 161 (528)
T 1q6z_A 118 LPRPLVKWSYEPAS--AAEVPHAMSRAIHMASMAPQGPVYLSVPYD 161 (528)
T ss_dssp SSTTSCSCEECCSS--GGGHHHHHHHHHHHHHSSSCCCEEEEEEGG
T ss_pred HHHHhhHhhhcCCC--HHHHHHHHHHHHHHHhcCCCCcEEEEechh
Confidence 77766555666643 4467778888999888765 7999999654
No 62
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=90.84 E-value=0.86 Score=45.60 Aligned_cols=107 Identities=15% Similarity=0.105 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCee-ecccccccccChhhhh
Q 019523 108 VATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSHLRATSDPQIYK 186 (339)
Q Consensus 108 ~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~-i~~~~~~~~~~~d~~~ 186 (339)
+|.|.|.+. +.-.++++..|=|.++. .-++..|-.-+.|||+|.-+-... ++.. ..| ..|...
T Consensus 64 aAdGyAr~t----------G~pgv~~~TsGpG~~N~---~~gia~A~~d~vPll~itG~~p~~~~g~~-~~Q--e~d~~~ 127 (578)
T 3lq1_A 64 FALGLAKAS----------KRPVVLLCTSGTAAANY---FPAVAEANLSQIPLIVLTADRPHELRNVG-APQ--AMDQLH 127 (578)
T ss_dssp HHHHHHHHH----------CCCEEEEECSSHHHHTT---HHHHHHHHHTTCCEEEEEEECCGGGTTSS-CTT--CCCCTT
T ss_pred HHHHHHHhh----------CCCEEEEECCchhhhhh---hHHHHHHHhcCCCeEEEeCCCCHHhhcCC-CCC--CcCHhh
Confidence 466666552 33345666677777764 557889999999999988654311 1111 111 235555
Q ss_pred hcccCCCcEEEecC-CCHHH----HHHHHHHHHHHHHcC-CCCEEEEEEE
Q 019523 187 KGPAFGMPGFHVDG-MDVLK----VREVAKEAIERARRG-EGPTLVECET 230 (339)
Q Consensus 187 ~a~a~G~~~~~Vdg-~d~~~----v~~a~~~A~~~ar~~-~gP~lIev~t 230 (339)
+++.+--...+|.. .+..+ +...+++|+..|..+ .||++|++..
T Consensus 128 ~~~~~tk~~~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~ 177 (578)
T 3lq1_A 128 LYGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPL 177 (578)
T ss_dssp TTGGGSSEEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEEC
T ss_pred HHhhheeeEeecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECcc
Confidence 66665555667743 34322 334678888888875 5999999964
No 63
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=90.16 E-value=0.66 Score=46.59 Aligned_cols=93 Identities=15% Similarity=0.017 Sum_probs=61.2
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCCCHHHHHHH
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREV 209 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a 209 (339)
..+++..|=|.++. .-++..|-..+.|+|+|+-+-..........| ..|...+++.+--....+. ++.++.+.
T Consensus 70 ~v~~~tsGpG~~N~---~~gl~~A~~~~vPll~Itg~~p~~~~g~~~~Q--~~d~~~~~~~~tk~~~~v~--~~~~~~~~ 142 (590)
T 1v5e_A 70 GVTVGSGGPGASHL---INGLYDAAMDNIPVVAILGSRPQRELNMDAFQ--ELNQNPMYDHIAVYNRRVA--YAEQLPKL 142 (590)
T ss_dssp CEEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGTTTTCTT--CCCCHHHHHTTCSEEEECC--SGGGHHHH
T ss_pred EEEEeCcChHHHHH---HHHHHHHHhcCCCEEEEcCCCCcccCCCCccc--ccCHHHHHHhhccEEEEeC--CHHHHHHH
Confidence 34555556666653 55788888899999999877642221111112 2355566666655566775 44478888
Q ss_pred HHHHHHHHHcCC-CCEEEEEEE
Q 019523 210 AKEAIERARRGE-GPTLVECET 230 (339)
Q Consensus 210 ~~~A~~~ar~~~-gP~lIev~t 230 (339)
+++|++.+..++ ||++| +..
T Consensus 143 i~~A~~~A~~~~~GPV~l-iP~ 163 (590)
T 1v5e_A 143 VDEAARMAIAKRGVAVLE-VPG 163 (590)
T ss_dssp HHHHHHHHHHTTSEEEEE-EET
T ss_pred HHHHHHHHhcCCCceEEE-Ecc
Confidence 999999998877 89999 743
No 64
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=90.07 E-value=0.46 Score=47.36 Aligned_cols=95 Identities=14% Similarity=0.179 Sum_probs=62.4
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeee-cc-cccccccChhhhhhcccCCCcEEEecCCCHHHHH
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GM-SHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVR 207 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i-~~-~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~ 207 (339)
..++|..|=|.++. .-++..|-.-+.|||+|.-+-.... +. ....| ..|...+++.+--...+|.. +.++.
T Consensus 72 gv~~~TsGpG~~N~---~~gi~~A~~~~vPll~itg~~~~~~~~~~~~~~Q--~~dq~~~~~~~tk~~~~v~~--~~~~~ 144 (564)
T 2q28_A 72 GICLTVSAPGFLNG---LTALANATVNGFPMIMISGSSDRAIVDLQQGDYE--ELDQMNAAKPYAKAAFRVNQ--PQDLG 144 (564)
T ss_dssp EEEEECSHHHHHHH---HHHHHHHHHHTCCEEEEEEECCHHHHHTTSCCTT--CCCHHHHHGGGSSEEEECCS--GGGHH
T ss_pred EEEEEccCchHHHH---HHHHHHHHhcCCCEEEEeCCCCccccCCCCCccc--cccHHHHHHHhhheeeecCC--HHHHH
Confidence 35555566665552 5678888999999999987654221 10 01112 23555667777666777753 44677
Q ss_pred HHHHHHHHHHHc-CCCCEEEEEEEe
Q 019523 208 EVAKEAIERARR-GEGPTLVECETY 231 (339)
Q Consensus 208 ~a~~~A~~~ar~-~~gP~lIev~t~ 231 (339)
+.+.+|++.|.. ..||+.|++...
T Consensus 145 ~~i~~A~~~A~~~~~GPV~l~iP~d 169 (564)
T 2q28_A 145 IALARAIRVSVSGRPGGVYLDLPAN 169 (564)
T ss_dssp HHHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred HHHHHHHHHHhcCCCceEEEEcCHH
Confidence 788999999987 459999998443
No 65
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=90.04 E-value=0.48 Score=47.33 Aligned_cols=94 Identities=13% Similarity=0.149 Sum_probs=62.1
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCee-ecc-cccccccChhhhhhcccCCCcEEEecCCCHHHHH
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGM-SHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVR 207 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~-i~~-~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~ 207 (339)
..+++..|=|.++. .-++..|-.-+.|||+|.-+-... ++. ....| ..|...+++.+--...+|. ++.++.
T Consensus 74 gv~~~TsGpG~~N~---~~~i~~A~~~~vPll~itg~~~~~~~~~~~~~~Q--~~dq~~~~~~~tk~~~~v~--~~~~~~ 146 (568)
T 2c31_A 74 GVCLTVSAPGFLNG---VTSLAHATTNCFPMILLSGSSEREIVDLQQGDYE--EMDQMNVARPHCKASFRIN--SIKDIP 146 (568)
T ss_dssp EEEEECSHHHHHHH---HHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTT--CCCHHHHSGGGSSEEEECC--SGGGHH
T ss_pred EEEEEcCCccHHHH---HHHHHHHHhcCCCEEEEccCCCccccCCCCCccc--ccCHHHHHHhhhheeeecC--CHHHHH
Confidence 35556566665553 567888999999999998765422 111 01112 2355666777666667775 344677
Q ss_pred HHHHHHHHHHHc-CCCCEEEEEEE
Q 019523 208 EVAKEAIERARR-GEGPTLVECET 230 (339)
Q Consensus 208 ~a~~~A~~~ar~-~~gP~lIev~t 230 (339)
..+.+|+..+.. ..||+.|++..
T Consensus 147 ~~i~~A~~~A~~~~~GPV~l~iP~ 170 (568)
T 2c31_A 147 IGIARAVRTAVSGRPGGVYVDLPA 170 (568)
T ss_dssp HHHHHHHHHHHSSSCCEEEEEEET
T ss_pred HHHHHHHHHhcCCCCceEEEeCCH
Confidence 788999999887 45899999843
No 66
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=89.48 E-value=2.4 Score=43.33 Aligned_cols=101 Identities=20% Similarity=0.134 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecc--cccccccChh
Q 019523 106 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGM--SHLRATSDPQ 183 (339)
Q Consensus 106 ~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~--~~~~~~~~~d 183 (339)
+++|.|+|+. +.-+++++.+...+..+ .+.+..++..++||++++.+.+++.+. +++ | +..|
T Consensus 415 v~~a~GlA~~-----------gG~~P~~~tf~~F~~~~---~~~ir~~a~~~lpvv~~~t~~g~~~G~dG~tH-q-~~ed 478 (669)
T 2r8o_A 415 TAIANGISLH-----------GGFLPYTSTFLMFVEYA---RNAVRMAALMKQRQVMVYTHDSIGLGEDGPTH-Q-PVEQ 478 (669)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGGGGGTT---HHHHHHHHHTTCCCEEEEECCSGGGCTTCTTT-C-CSSH
T ss_pred HHHHHHHHHc-----------CCCeEEEeehHHHHHHH---HHHHHHHHhcCCCEEEEEeCCCcCcCCCCCcc-C-CHHH
Confidence 4566777765 33355666665544321 567888999999999998877755442 222 2 3334
Q ss_pred hhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 184 IYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 184 ~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
++-+. .+|+++| .-.|..++...++.|++ ..++|++|-.
T Consensus 479 la~lr---~iP~l~V~~Pad~~E~~~~l~~a~~---~~~~Pv~i~~ 518 (669)
T 2r8o_A 479 VASLR---VTPNMSTWRPCDQVESAVAWKYGVE---RQDGPTALIL 518 (669)
T ss_dssp HHHHH---TSTTCEEECCSSHHHHHHHHHHHHH---CSSSCEEEEC
T ss_pred HHHhc---CCCCCEEEecCCHHHHHHHHHHHHH---hCCCcEEEEe
Confidence 43332 3455544 55677777776665553 2378999843
No 67
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=89.01 E-value=1 Score=45.64 Aligned_cols=102 Identities=17% Similarity=0.118 Sum_probs=61.8
Q ss_pred hHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecccccccccChhhh
Q 019523 106 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIY 185 (339)
Q Consensus 106 ~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~~ 185 (339)
+.+|+|+|++ +..+++++.++++.. .. ++.+.+++..++|+++++...+++.+.....+.+..|++
T Consensus 368 v~~a~G~A~~-----------G~~~~~~~~f~~Fl~-~a--~dqi~~~a~~~~~v~~v~~~~g~~~G~dG~tH~~~ed~a 433 (616)
T 3mos_A 368 VSIAVGCATR-----------NRTVPFCSTFAAFFT-RA--FDQIRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLA 433 (616)
T ss_dssp HHHHHHHHGG-----------GCCEEEEEEEGGGGG-GG--HHHHHHHHHTTCCEEEEEESBSGGGCTTCGGGCBSSHHH
T ss_pred HHHHHHHHHc-----------CCCCEEEEehHHHHH-HH--HHHHHHHHHhCCCeEEEEECCCccccCCCCcccCHHHHH
Confidence 4556666654 333466778988864 33 778888889999999887766644442111122333443
Q ss_pred hhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 186 KKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 186 ~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
-+. .+|+++| .-.|+.++...+ +.+...++|++|-.
T Consensus 434 ~l~---~iP~l~V~~P~d~~e~~~~l----~~a~~~~gp~~ir~ 470 (616)
T 3mos_A 434 MFR---SVPTSTVFYPSDGVATEKAV----ELAANTKGICFIRT 470 (616)
T ss_dssp HHH---TSTTEEEECCCSHHHHHHHH----HHHHTCCSEEEEEC
T ss_pred Hhc---CCCCCEEEecCCHHHHHHHH----HHHHhcCCCEEEEE
Confidence 322 3566654 556877776654 44445689987743
No 68
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=88.83 E-value=2.3 Score=43.30 Aligned_cols=101 Identities=21% Similarity=0.180 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecc--cccccccChh
Q 019523 106 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGM--SHLRATSDPQ 183 (339)
Q Consensus 106 ~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~--~~~~~~~~~d 183 (339)
+++|.|+|+. +.-++++..+.=.+..+ ++++..++..++||++++.+.+++.+. +++ | +..|
T Consensus 410 ~~~a~GlA~~-----------Gg~~P~~~t~~~F~~~~---~~air~~a~~~lpvv~~~t~~g~g~G~dG~tH-q-~~ed 473 (651)
T 2e6k_A 410 GAILNGLNLH-----------GGYRAYGGTFLVFSDYM---RPAIRLAALMGVPTVFVFTHDSIALGEDGPTH-Q-PVEH 473 (651)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGGGGGGS---HHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-C-CSSH
T ss_pred HHHHHHHHHc-----------CCCEEEEEeHHHHHHHH---HHHHHHHHhcCCCEEEEEECCccccCCCcCcc-c-cHHH
Confidence 4567777766 42456666553332211 556888999999999998888765542 222 2 3344
Q ss_pred hhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 184 IYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 184 ~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
++-+. .+|+++| .-.|..++...++.|++. .++|++|-.
T Consensus 474 la~lr---~iP~l~V~~Pad~~E~~~~l~~A~~~---~~~Pv~i~~ 513 (651)
T 2e6k_A 474 LMSLR---AMPNLFVIRPADAYETFYAWLVALRR---KEGPTALVL 513 (651)
T ss_dssp HHHHH---TSTTCEEECCSSHHHHHHHHHHHHHC---CSSCEEEEC
T ss_pred HHHhc---CCCCcEEEecCCHHHHHHHHHHHHHc---CCCCEEEEE
Confidence 44332 3444433 556777777766666542 368998865
No 69
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=88.37 E-value=1.1 Score=44.49 Aligned_cols=108 Identities=12% Similarity=0.046 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeee-ccc--cc---cccc
Q 019523 107 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMS--HL---RATS 180 (339)
Q Consensus 107 p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i-~~~--~~---~~~~ 180 (339)
-+|.|.+.+. + ...+++..|=|.++. .-++..|-..+.|+|+|+-+-.... +.. .. ....
T Consensus 57 ~~A~Gyar~t----------g-~~v~~~tsGpG~~N~---~~gv~~A~~~~~Pll~itg~~p~~~~~~~~~~~~~~g~~~ 122 (552)
T 1ovm_A 57 YAADGYARCK----------G-FAALLTTFGVGELSA---MNGIAGSYAEHVPVLHIVGAPGTAAQQRGELLHHTLGDGE 122 (552)
T ss_dssp HHHHHHHHHH----------S-CEEEEEETTHHHHHT---HHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSC
T ss_pred HHHHHHHHhh----------C-CcEEEEccCCcHHHH---HHHHHHHhhhcCCEEEEECCCCHHHHhcccccccccCCCc
Confidence 3566666652 3 235666677776553 5578899999999999987654221 100 00 0001
Q ss_pred ChhhhhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 019523 181 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETY 231 (339)
Q Consensus 181 ~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~ 231 (339)
..+...+++.+--....|.. + .+.+.+.+|++.+...+||+.|++...
T Consensus 123 ~q~~~~~~~~~tk~~~~v~~-~--~~~~~i~~A~~~a~~~~GPV~l~iP~d 170 (552)
T 1ovm_A 123 FRHFYHMSEPITVAQAVLTE-Q--NACYEIDRVLTTMLRERRPGYLMLPAD 170 (552)
T ss_dssp CSHHHHHTGGGCSEEEECCT-T--THHHHHHHHHHHHHHHTCCEEEEEEHH
T ss_pred HHHHHHHHHhheeEEEEEcc-c--cHHHHHHHHHHHHHhCCCCEEEEeehh
Confidence 12455677777777778865 3 555677788888777679999999543
No 70
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=88.23 E-value=1.3 Score=44.23 Aligned_cols=96 Identities=13% Similarity=0.074 Sum_probs=61.2
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeee-cccc---c-ccc-cChhhhhhcccCCCcEEEecCCCH
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMSH---L-RAT-SDPQIYKKGPAFGMPGFHVDGMDV 203 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i-~~~~---~-~~~-~~~d~~~~a~a~G~~~~~Vdg~d~ 203 (339)
..+++..|=|.++. .-++..|-..+.|+|+|+-+..... +... + .+. ...+...+++.+--....+..
T Consensus 89 ~v~~~tsGpG~~N~---~~gi~~A~~~~vPlv~itg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tk~~~~v~~--- 162 (570)
T 2vbf_A 89 AAFLTTFGVGELSA---INGLAGSYAENLPVVEIVGSPTSKVQNDGKFVHHTLADGDFKHFMKMHEPVTAARTLLTA--- 162 (570)
T ss_dssp EEEEEETTHHHHHH---HHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCCHHHHHTGGGCSEEEECCT---
T ss_pred eEEEEcCCCCHHHH---HHHHHHHhhhCCCEEEEeCCCCHHHhhccccceeeccccchHHHHHHhhhhEEEEEEECc---
Confidence 35555566665552 5578889999999999987764221 1100 0 000 112345667777767777755
Q ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 019523 204 LKVREVAKEAIERARRGEGPTLVECETY 231 (339)
Q Consensus 204 ~~v~~a~~~A~~~ar~~~gP~lIev~t~ 231 (339)
.++...+++|++.|...+||+.|++...
T Consensus 163 ~~~~~~l~~A~~~A~~~~GPV~l~iP~d 190 (570)
T 2vbf_A 163 ENATYEIDRVLSQLLKERKPVYINLPVD 190 (570)
T ss_dssp TTHHHHHHHHHHHHHHHCCCEEEEEEHH
T ss_pred ccHHHHHHHHHHHHhhCCCCEEEEcchh
Confidence 3566677888888887789999999554
No 71
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=88.00 E-value=0.85 Score=45.38 Aligned_cols=96 Identities=7% Similarity=0.022 Sum_probs=61.3
Q ss_pred EEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeee-cc--ccc---ccccChhhhhhcccCCCcEEEecCCCHH
Q 019523 131 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GM--SHL---RATSDPQIYKKGPAFGMPGFHVDGMDVL 204 (339)
Q Consensus 131 ~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i-~~--~~~---~~~~~~d~~~~a~a~G~~~~~Vdg~d~~ 204 (339)
.+++..|=|.++. .-++..|-..+.|||+|.-+-.... .. ... ......+...+++.+--...++...+
T Consensus 69 v~~~TsGpG~~N~---~~gia~A~~~~~Pll~itg~~~~~~~~~~~~~~~~~g~~~~q~~~~~~~~~~k~~~~v~~~~-- 143 (563)
T 2vk8_A 69 CIITTFGVGELSA---LNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHRMSANISETTAMITDIA-- 143 (563)
T ss_dssp EEEEETTHHHHHH---HHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTSCSSSCSSHHHHHHHTTCSEEEECCCTT--
T ss_pred EEEEcCCCcHHHH---HHHHHHHHhhCCCEEEEECCCChHHhhcccccccccCCcchHHHHHHhhhhEEEEEEeCCHH--
Confidence 5566667777652 5578888899999999987653111 00 000 00111245667777776777775433
Q ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 019523 205 KVREVAKEAIERARRGEGPTLVECETY 231 (339)
Q Consensus 205 ~v~~a~~~A~~~ar~~~gP~lIev~t~ 231 (339)
++.+.+.+|++.+...+||+.|++...
T Consensus 144 ~~~~~i~~A~~~A~~~~GPV~l~iP~d 170 (563)
T 2vk8_A 144 TAPAEIDRCIRTTYVTQRPVYLGLPAN 170 (563)
T ss_dssp THHHHHHHHHHHHHHHTSCEEEEEETT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 566677778888877779999998543
No 72
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=87.77 E-value=1.4 Score=45.20 Aligned_cols=101 Identities=15% Similarity=0.113 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHHHhhhhhhccC-CCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecc--cccccccCh
Q 019523 106 IPVATGAAFTSKYRREVLKEAD-CDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGM--SHLRATSDP 182 (339)
Q Consensus 106 ~p~AiG~a~A~k~~~~~~~~~~-~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~--~~~~~~~~~ 182 (339)
+++|.|+|+. + .-++++.++...+. -..+++..++..++||++++...+++.+. +++ | +..
T Consensus 427 v~~a~GlA~~-----------G~~~~P~~~t~~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~tH-q-~~e 490 (675)
T 1itz_A 427 GAICNGIALH-----------SPGFVPYCATFFVFTD---YMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTH-Q-PIE 490 (675)
T ss_dssp HHHHHHHHTT-----------CTTCEEEEEEEGGGHH---HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-C-CSS
T ss_pred HHHHHHHHhc-----------CCCCEEEEEEHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCCCCc-C-cHH
Confidence 4466666654 3 24566666644432 22667888999999999999777655432 222 2 333
Q ss_pred hhhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 183 QIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 183 d~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
|++-+. .+|+++| .-.|+.++...++.|++ ..++|++|-.
T Consensus 491 dla~lr---~iP~l~V~~Pad~~e~~~~l~~a~~---~~~~Pv~i~~ 531 (675)
T 1itz_A 491 HLVSFR---AMPNILMLRPADGNETAGAYKVAVL---NRKRPSILAL 531 (675)
T ss_dssp HHHHHH---SSSSCEEECCCSHHHHHHHHHHHHH---CTTSCEEEEE
T ss_pred HHHHhc---cCCCeEEEECCCHHHHHHHHHHHHH---hCCCcEEEEe
Confidence 443332 3566644 55687777776655553 2378999854
No 73
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=87.16 E-value=2.8 Score=42.87 Aligned_cols=101 Identities=14% Similarity=0.100 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecc--cccccccChh
Q 019523 106 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGM--SHLRATSDPQ 183 (339)
Q Consensus 106 ~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~--~~~~~~~~~d 183 (339)
+++|.|+|+. +.-++++.++..-+..+ ..++..++..++||++++...+++.+. +++ | +..+
T Consensus 415 ~~~a~GlA~~-----------GG~~P~~~~~~~F~~~~---~~~ir~~a~~~~pvv~~~t~~g~g~G~dG~tH-q-~~ed 478 (673)
T 1r9j_A 415 CAILNGLDAH-----------DGIIPFGGTFLNFIGYA---LGAVRLAAISHHRVIYVATHDSIGVGEDGPTH-Q-PVEL 478 (673)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGGGGGGG---HHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-C-CSSH
T ss_pred HHHHHHHHhc-----------CCCEEEEEehHHHHHHH---HHHHHHHHhcCCCEEEEEECCccCcCCCCccc-C-CHHH
Confidence 3466676654 32356666654433221 556888999999999998777655442 222 2 3334
Q ss_pred hhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 184 IYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 184 ~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
++-+. .+|+++| .-.|+.++...++.|++ ..++|++|-.
T Consensus 479 la~lr---~iP~l~V~~Pad~~e~~~~l~~a~~---~~~~Pv~i~~ 518 (673)
T 1r9j_A 479 VAALR---AMPNLQVIRPSDQTETSGAWAVALS---SIHTPTVLCL 518 (673)
T ss_dssp HHHHH---HSTTCEEECCSSHHHHHHHHHHHHH---CTTCCEEEEC
T ss_pred HHHHc---CCCCCEEEeCCCHHHHHHHHHHHHH---hCCCeEEEEE
Confidence 43332 2455544 55677777776665553 2378999854
No 74
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=86.84 E-value=3.1 Score=42.04 Aligned_cols=102 Identities=17% Similarity=0.194 Sum_probs=61.0
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeec--ccccccccCh
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDP 182 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~--~~~~~~~~~~ 182 (339)
.+.+|.|+|++ + -++++.++++.. +-.+-+-++.++..++||++++.+.++ .+ .+++. ...
T Consensus 373 ~~~~a~G~A~~-----------G-~rp~~~~~~~F~--~~a~dqi~~~~a~~~~pvv~~~~~~g~-~g~~G~tH~--~~~ 435 (621)
T 2o1s_A 373 AVTFAAGLAIG-----------G-YKPIVAIYSTFL--QRAYDQVLHDVAIQKLPVLFAIDRAGI-VGADGQTHQ--GAF 435 (621)
T ss_dssp HHHHHHHHHHT-----------T-CEEEEEEETTGG--GGGHHHHHHTTTTTTCCCEEEEESCBC-CCTTCGGGC--BCS
T ss_pred HHHHHHHHHHC-----------C-CEEEEEehHhHH--HHHHHHHHHHHHhcCCCEEEEEECCcc-CCCCCCccC--chH
Confidence 34567777765 2 467777788864 322235577788999999999977664 22 12222 233
Q ss_pred hhhhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 183 QIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 183 d~~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
|++-+..--|+.++ .-.|+.+++..++.|++. .++|++|-.
T Consensus 436 d~~~~~~iP~l~v~--~P~d~~e~~~~l~~a~~~---~~~Pv~i~~ 476 (621)
T 2o1s_A 436 DLSYLRCIPEMVIM--TPSDENECRQMLYTGYHY---NDGPSAVRY 476 (621)
T ss_dssp HHHHTTTSTTCEEE--CCSSHHHHHHHHHHHHHC---CSSCEEEEC
T ss_pred HHHHHhcCCCCEEE--ecCCHHHHHHHHHHHHHc---CCCCEEEEe
Confidence 44333222244333 456777877766666542 378998855
No 75
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=86.63 E-value=2.2 Score=40.27 Aligned_cols=98 Identities=19% Similarity=0.118 Sum_probs=50.5
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEEE-eCCCCcccchHHHHHHH-HHhC--------CCCEEEEEEcCCeeeccc
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLNM-AALW--------KLPIVFVVENNLWAIGMS 174 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~-~GDG~~~~g~~~eal~~-A~~~--------~Lpvi~vv~NN~~~i~~~ 174 (339)
.+..|.|+|++ + -++++.+ +++.. +.. ++.+.. ++.. ++||++++.+.+ ..+..
T Consensus 110 ~v~~a~G~A~~-----------G-~rpv~~~tf~~Fl-~~a--~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg-~~g~g 173 (369)
T 1ik6_A 110 ILGFAMGMAMA-----------G-LKPVAEIQFVDFI-WLG--ADELLNHIAKLRYRSGGNYKAPLVVRTPVGS-GTRGG 173 (369)
T ss_dssp HHHHHHHHHHT-----------T-CEEEEECCCC-----CC--HHHHHHHHHHHHC------CCCCEEEEEECC------
T ss_pred HHHHHHHHHHC-----------C-CeeEEEecchhHH-HHH--HHHHHHHHHHHHHhhCCCCCCCEEEEEeCCC-CCCCC
Confidence 35667777765 2 3455544 88876 333 454543 4433 999999988665 22222
Q ss_pred ccccccChhhhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEE
Q 019523 175 HLRATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVE 227 (339)
Q Consensus 175 ~~~~~~~~d~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIe 227 (339)
...+ ..+. .+.+ .+|++.| .-.|+.+....++.|++ .++|++|-
T Consensus 174 ~~hs--~~~~-a~l~--~iPnl~V~~Psd~~e~~~ll~~A~~----~~~Pv~i~ 218 (369)
T 1ik6_A 174 LYHS--NSPE-AIFV--HTPGLVVVMPSTPYNAKGLLKAAIR----GDDPVVFL 218 (369)
T ss_dssp --------HH-HHHH--TCTTCEEECCCSHHHHHHHHHHHHH----SSSCEEEE
T ss_pred cccc--ccHH-HHHc--CCCCcEEEecCCHHHHHHHHHHHHh----CCCCEEEE
Confidence 1111 1222 2222 3444433 55677788776666653 67899884
No 76
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=86.59 E-value=1.9 Score=44.13 Aligned_cols=104 Identities=16% Similarity=0.137 Sum_probs=60.7
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecccccccccChhh
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~ 184 (339)
.+++|.|+|+. +.-++++.++.+-.. . ..+.+..++..++||+++....+++.+.......+..|+
T Consensus 415 ~v~~a~GlA~~-----------gG~~P~~~tf~~F~~-~--~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~THq~~ed~ 480 (663)
T 3kom_A 415 MAAIMNGLSLY-----------GGIKPYGGTFLVFSD-Y--SRNAIRMSALMKQPVVHVMSHDSIGLGEDGPTHQPIEHV 480 (663)
T ss_dssp HHHHHHHHHHH-----------SSCEEEEEEEGGGHH-H--HHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTTCCSSHH
T ss_pred HHHHHHHHHHc-----------CCCEEEEEehHHHHH-H--HHHHHHHHHhcCCCEEEEEeCCccccCCCCCCcCCHHHH
Confidence 34567777765 334566666555432 1 256778889999999999877765544211111233344
Q ss_pred hhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 185 YKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 185 ~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
+-+. .+|+++| .-.|+.++...++.|++ ..++|++|-.
T Consensus 481 a~lr---~iPnl~V~~Pad~~e~~~~l~~A~~---~~~~Pv~ir~ 519 (663)
T 3kom_A 481 PSLR---LIPNLSVWRPADTIETMIAWKEAVK---SKDTPSVMVL 519 (663)
T ss_dssp HHHH---TSTTCEEECCCSHHHHHHHHHHHHH---CSSCCEEEEC
T ss_pred HHHh---cCCCcEEEeeCCHHHHHHHHHHHHH---hCCCCEEEEc
Confidence 3332 4555544 45677776665555542 2689999843
No 77
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=85.48 E-value=3 Score=42.34 Aligned_cols=100 Identities=16% Similarity=0.084 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeec--ccccccccChh
Q 019523 106 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDPQ 183 (339)
Q Consensus 106 ~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~--~~~~~~~~~~d 183 (339)
+.+|.|+|+. +.-++++.++.+ |.+ -..+.+.+++..++||+++....+++.+ .+++ .+..|
T Consensus 395 v~~a~GlA~~-----------gG~~P~~~~f~~--F~~-~~~~~ir~~a~~~~pv~~~~t~~g~g~G~dG~TH--q~~ed 458 (632)
T 3l84_A 395 AAINNAFARY-----------GIFLPFSATFFI--FSE-YLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTH--QPIEQ 458 (632)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGG--GHH-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGG--SCSSH
T ss_pred HHHHHHHHHc-----------CCCEEEEEecHH--HHH-HHHHHHHHHhccCCCEEEEEECCCcCCCCCCCCC--CCHhH
Confidence 4566777765 334566665543 332 2256777888999999999877775543 2322 23344
Q ss_pred hhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 184 IYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 184 ~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
++-+. .+|+++| .-.|+.++...++.|+ +.++|++|-.
T Consensus 459 ~a~lr---~iP~l~V~~P~d~~e~~~~l~~A~----~~~~Pv~ir~ 497 (632)
T 3l84_A 459 LSTFR---AMPNFLTFRPADGVENVKAWQIAL----NADIPSAFVL 497 (632)
T ss_dssp HHHHH---HSSSCEEECCSSHHHHHHHHHHHH----HCSSCEEEEC
T ss_pred HHHHh---cCCCCEEEecCCHHHHHHHHHHHH----hCCCCEEEEE
Confidence 43332 3455544 4567777766665555 4689998854
No 78
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=84.57 E-value=4 Score=40.45 Aligned_cols=94 Identities=10% Similarity=0.031 Sum_probs=57.9
Q ss_pred CcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCee-ecccccccccChhhhhhcccCCCcEEEecCCC----H
Q 019523 129 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSHLRATSDPQIYKKGPAFGMPGFHVDGMD----V 203 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~-i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d----~ 203 (339)
-.++++..|=|+++. .-++..|-.-+.|||+|.-+-... ++.. ..| ..|...+++.+--....|...+ +
T Consensus 72 pgv~~~TsGpG~~N~---~~gia~A~~d~vPll~itG~~~~~~~g~~-~~Q--~~d~~~~~~~~tk~~~~v~~~~~~~~~ 145 (556)
T 3hww_A 72 PVAVIVTSGTAVANL---YPALIEAGLTGEKLILLTADRPPELIDCG-ANQ--AIRQPGMFASHPTHSISLPRPTQDIPA 145 (556)
T ss_dssp CEEEEECSSHHHHTT---HHHHHHHHHHCCCEEEEEEECCGGGSSSS-CTT--CCCCTTTTTTCSSEEEECCCCCTTSCH
T ss_pred CEEEEECCCcHHHhh---hHHHHHHHHhCCCeEEEeCCCCHHHhccC-CCc--cccHHHHHhhheeEEEecCCCcccccH
Confidence 345666677777764 557889999999999998655321 2211 112 2355566666655566664432 3
Q ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEE
Q 019523 204 LKVREVAKEAIERARRGEGPTLVECET 230 (339)
Q Consensus 204 ~~v~~a~~~A~~~ar~~~gP~lIev~t 230 (339)
..+.+++++|+. ....||+.|++..
T Consensus 146 ~~i~~~i~~A~~--~~r~GPV~i~iP~ 170 (556)
T 3hww_A 146 RWLVSTIDHALG--TLHAGGVHINCPF 170 (556)
T ss_dssp HHHHHHHHHHHH--SCCSSCEEEEEEC
T ss_pred HHHHHHHHHHHh--cCCCCCEEEeCCc
Confidence 346666666662 1245899999964
No 79
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=84.45 E-value=2 Score=44.03 Aligned_cols=101 Identities=14% Similarity=0.158 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHhhhhhhccCCCc-EEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeec--ccccccccCh
Q 019523 106 IPVATGAAFTSKYRREVLKEADCDH-VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDP 182 (339)
Q Consensus 106 ~p~AiG~a~A~k~~~~~~~~~~~~~-~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~--~~~~~~~~~~ 182 (339)
+++|.|+|+. +.-+ +++..+.+-+. . ...++..++..++||++++...+++.+ .+++ | +..
T Consensus 422 vg~a~GlA~~-----------Gg~~~P~~~~f~~F~~-~--~~~air~~a~~~lpvv~v~t~~g~g~G~dG~tH-q-~~e 485 (680)
T 1gpu_A 422 GAIMNGISAF-----------GANYKPYGGTFLNFVS-Y--AAGAVRLSALSGHPVIWVATHDSIGVGEDGPTH-Q-PIE 485 (680)
T ss_dssp HHHHHHHHHH-----------CTTCEEEEEEEHHHHG-G--GHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-C-CSS
T ss_pred HHHHHHHHhc-----------CCCceEEEeehHHHHH-H--HHHHHHHHHhcCCCEEEEEeCCccccCCCCCcc-C-CHH
Confidence 4567777766 3234 55555433222 1 156688889999999999877775544 2222 2 333
Q ss_pred hhhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 183 QIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 183 d~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
|++-+. .+|+++| .-.|+.++...++.|++ ..++|++|-.
T Consensus 486 dla~lr---~iP~l~V~~Pad~~e~~~~l~~A~~---~~~~Pv~i~~ 526 (680)
T 1gpu_A 486 TLAHFR---SLPNIQVWRPADGNEVSAAYKNSLE---SKHTPSIIAL 526 (680)
T ss_dssp HHHHHH---TSSSCEEECCCSHHHHHHHHHHHHH---CSSCCEEEEC
T ss_pred HHHHhc---CCCCCEEEecCCHHHHHHHHHHHHH---hCCCcEEEEe
Confidence 443332 3455544 55677777766655553 2378999843
No 80
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=84.31 E-value=2.1 Score=43.39 Aligned_cols=100 Identities=17% Similarity=0.238 Sum_probs=59.4
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeec--ccccccccCh
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDP 182 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~--~~~~~~~~~~ 182 (339)
.+.+|+|+|++ + -++++.++.+.. +-.+-+-++.++..++||++++.+.+. .+ .+++. ...
T Consensus 376 ~~~~a~G~A~~-----------G-~rp~~~~~~~F~--~~a~dqi~~~~a~~~~pvv~~~~~~g~-~g~dG~tH~--~~~ 438 (629)
T 2o1x_A 376 AVTTAAGMALQ-----------G-MRPVVAIYSTFL--QRAYDQVLHDVAIEHLNVTFCIDRAGI-VGADGATHN--GVF 438 (629)
T ss_dssp HHHHHHHHHHT-----------T-CEEEEEEEHHHH--GGGHHHHHHTTTTTTCCCEEEEESBBC-CCTTCTTTC--BCS
T ss_pred HHHHHHHHHHc-----------C-CEEEEEecHHHH--HHHHHHHHHHHhhcCCCEEEEEECCcc-CCCCCcccC--ccH
Confidence 34567777765 2 456666666643 322235577788999999999977663 22 12221 233
Q ss_pred hhhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 183 QIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 183 d~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
|++-+. .+|++.| .-.|+.++...++.|++ .++|++|-.
T Consensus 439 d~a~~r---~iP~l~v~~P~d~~e~~~~~~~a~~----~~~Pv~i~~ 478 (629)
T 2o1x_A 439 DLSFLR---SIPGVRIGLPKDAAELRGMLKYAQT----HDGPFAIRY 478 (629)
T ss_dssp HHHHTT---TSTTCEEECCSSHHHHHHHHHHHHH----SSSCEEEEC
T ss_pred HHHHHH---ccCCcEEEecCCHHHHHHHHHHHHh----CCCCEEEEe
Confidence 433322 2344433 55677787776666664 478998855
No 81
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=84.14 E-value=5.8 Score=40.65 Aligned_cols=102 Identities=20% Similarity=0.138 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCC-cccchHHHHHHHHHhCCCCEEEEEEcCCeeecccccccccChhh
Q 019523 106 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGT-CNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184 (339)
Q Consensus 106 ~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~-~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~ 184 (339)
+.+|.|+|+. +.-++++..+.-=+ +. ..++.+++..++||+|++...+++.+..-....+..|+
T Consensus 440 v~~A~GlA~~-----------gG~~P~~~tf~~Fs~f~----~~air~~al~~lpVv~v~~~~gigvG~dG~THq~ied~ 504 (690)
T 3m49_A 440 GAAMNGIALH-----------GGLKTYGGTFFVFSDYL----RPAIRLAALMQLPVTYVFTHDSIAVGEDGPTHEPIEQL 504 (690)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGGGGGGG----HHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGCCSSHH
T ss_pred HHHHHHHHHc-----------CCCEEEEEecHHHHHHH----HHHHHHHHhcCCCcEEEEECCCcCCCCCCCccCCHHHH
Confidence 4567777765 23345554332211 11 33577788999999999988775444211111233444
Q ss_pred hhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 185 YKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 185 ~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
+-+. .+|+++| .-.|+.++...++.|++ ..++|++|-.
T Consensus 505 a~lr---~iPnl~V~~Pad~~E~~~~l~~Ai~---~~~~Pv~ir~ 543 (690)
T 3m49_A 505 AALR---AMPNVSVIRPADGNESVAAWRLALE---STNKPTALVL 543 (690)
T ss_dssp HHHH---TSTTCEEECCSSHHHHHHHHHHHHH---CSSSCEEEEC
T ss_pred HHHh---cCCCCEEEeeCCHHHHHHHHHHHHH---cCCCCEEEEe
Confidence 3332 3555544 45677777665555543 2378999843
No 82
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=83.82 E-value=2.7 Score=39.23 Aligned_cols=98 Identities=19% Similarity=0.091 Sum_probs=55.5
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEE-EeCCCCcccchHHHHHHHH-H--------hCCCCEEEEEEcCCeee-cc
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLA-FFGDGTCNNGQFFECLNMA-A--------LWKLPIVFVVENNLWAI-GM 173 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~-~~GDG~~~~g~~~eal~~A-~--------~~~Lpvi~vv~NN~~~i-~~ 173 (339)
.+..|.|+|++ + -++++. .+++.. +.. ++.+... + ..++||++++.+ ++.- ..
T Consensus 74 ~v~~a~G~A~~-----------G-~rp~~~~~f~~F~-~~a--~dqi~~~~a~~~y~~~g~~~~pvv~~~~~-G~~g~~G 137 (341)
T 2ozl_B 74 FAGIAVGAAMA-----------G-LRPICEFMTFNFS-MQA--IDQVINSAAKTYYMSGGLQPVPIVFRGPN-GASAGVA 137 (341)
T ss_dssp HHHHHHHHHHT-----------T-CEEEEECSSGGGG-GGG--HHHHHTTTTTHHHHTTSSCCCCCEEEEEC-SCCSSCC
T ss_pred HHHHHHHHHHC-----------C-CEEEEEeccHHHH-HHH--HHHHHHHHHHHHhhccccCCCCEEEEEcC-cCCCCCC
Confidence 35667777765 2 345554 388876 333 5555543 3 389999999885 5221 11
Q ss_pred cccccccChhhhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 174 SHLRATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 174 ~~~~~~~~~d~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
+++.+ ..+ + ... .+|++.| .-.|+.+....++.|++ .++|++|-.
T Consensus 138 ~tHs~--~~e-a-~l~--~iP~l~V~~Psd~~e~~~~l~~a~~----~~~Pv~i~~ 183 (341)
T 2ozl_B 138 AQHSQ--CFA-A-WYG--HCPGLKVVSPWNSEDAKGLIKSAIR----DNNPVVVLE 183 (341)
T ss_dssp GGGCC--CCH-H-HHH--TSTTCEEECCCSHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred cchhh--HHH-H-Hhc--cCCCCEEEEeCCHHHHHHHHHHHHh----cCCCEEEEE
Confidence 22212 223 2 222 2444433 55677788776666654 478998865
No 83
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=78.58 E-value=5.5 Score=36.84 Aligned_cols=100 Identities=12% Similarity=0.042 Sum_probs=56.5
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEEE-eCCCCcccchHHHHHH-HHHh--------CCCCEEEEEEcCCeeeccc
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLN-MAAL--------WKLPIVFVVENNLWAIGMS 174 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~-~GDG~~~~g~~~eal~-~A~~--------~~Lpvi~vv~NN~~~i~~~ 174 (339)
.+..|.|+|++ + -++++++ ++++. +.. ++.+. .++. +++|+++++.+.+ +...+
T Consensus 64 ~~~~a~G~A~~-----------G-~rp~~~~t~~~F~-~~a--~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g-~~~G~ 127 (338)
T 1qs0_B 64 IVGTAVGMGAY-----------G-LRPVVEIQFADYF-YPA--SDQIVSEMARLRYRSAGEFIAPLTLRMPCGG-GIYGG 127 (338)
T ss_dssp HHHHHHHHHHH-----------T-CEEEEECSCGGGC-GGG--HHHHHTTTTTHHHHTTTSSCCCCEEEEEECC-SSSCC
T ss_pred HHHHHHHHHhC-----------C-CEEEEEeccHhHH-HHH--HHHHHHHHHHHhhhcCCCCCCCEEEEEeCCC-CCCCc
Confidence 45678888876 3 3444444 88886 333 55553 3432 3699999986654 32222
Q ss_pred ccccccChhhhhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 175 HLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 175 ~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
++. +..|..-+..--|+.++ .-.|+.+.+..++.|++ .++|++|-.
T Consensus 128 th~--s~~d~~~l~~iP~l~V~--~Psd~~e~~~~l~~A~~----~~~Pv~i~~ 173 (338)
T 1qs0_B 128 QTH--SQSPEAMFTQVCGLRTV--MPSNPYDAKGLLIASIE----CDDPVIFLE 173 (338)
T ss_dssp SSS--SCCCHHHHTTSTTCEEE--CCCSHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred ccc--cccHHHHHhcCCCCEEE--eeCCHHHHHHHHHHHHh----cCCcEEEEE
Confidence 221 22244333222255444 45677788776666654 478999844
No 84
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=78.42 E-value=8.1 Score=39.71 Aligned_cols=99 Identities=18% Similarity=0.171 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecc--cccccccChh
Q 019523 106 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGM--SHLRATSDPQ 183 (339)
Q Consensus 106 ~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~--~~~~~~~~~d 183 (339)
+++|.|+|+. +.-++++.++. .|.+- ....+..++..++||+++....+++.+. +++ | +..|
T Consensus 461 v~~AaGlA~~-----------~G~~Pv~~~f~--~F~~~-~~~~ir~~a~~~lpv~~v~thdg~gvG~dG~TH-q-~~ed 524 (711)
T 3uk1_A 461 SAAINGLVLH-----------GGYKPFGGTFL--TFSDY-SRNALRVAALMKVPSIFVFTHDSIGLGEDGPTH-Q-SVEH 524 (711)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEG--GGHHH-HHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-C-CSSH
T ss_pred HHHHHHHHHc-----------CCCEEEEEEhH--HHHHH-HHHHHHHhhhcCCCEEEEEECCCcCcCCCCCcc-C-ChhH
Confidence 4567777763 22345555542 23321 2567777889999999999877654432 222 2 3334
Q ss_pred hhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEE
Q 019523 184 IYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVE 227 (339)
Q Consensus 184 ~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIe 227 (339)
++-+. .+|+++| .-.|..++...++.|+ ..++|++|-
T Consensus 525 ~a~lr---~iPnl~V~~Pad~~E~~~~l~~Ai----~~~~Pv~ir 562 (711)
T 3uk1_A 525 VASLR---LIPNLDVWRPADTVETAVAWTYAV----AHQHPSCLI 562 (711)
T ss_dssp HHHHH---TSTTCEEECCSSHHHHHHHHHHHH----HSSSCEEEE
T ss_pred HHHHh---cCCCCEEEecCCHHHHHHHHHHHH----hcCCCEEEE
Confidence 43322 4555544 5567777776666555 468999884
No 85
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=77.59 E-value=8.8 Score=35.22 Aligned_cols=98 Identities=15% Similarity=0.085 Sum_probs=54.2
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEEE-eCCCCcccchHHHHHHH-HHh--------CCCCEEEEEEcCCeeeccc
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLNM-AAL--------WKLPIVFVVENNLWAIGMS 174 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~-~GDG~~~~g~~~eal~~-A~~--------~~Lpvi~vv~NN~~~i~~~ 174 (339)
.+..|+|+|++ + -++++++ ++++. +.. ++.+.. ++. .++|+++++.. ++.....
T Consensus 62 ~v~~a~G~A~~-----------G-~rp~~~~t~~~F~-~~a--~dqi~~~~a~~~~~~~g~~~~pvv~~~~~-g~~~~~g 125 (324)
T 1w85_B 62 IGGLAIGLALQ-----------G-FRPVPEIQFFGFV-YEV--MDSICGQMARIRYRTGGRYHMPITIRSPF-GGGVHTP 125 (324)
T ss_dssp HHHHHHHHHHT-----------T-CEEEEBCSSGGGG-GGT--HHHHHTTGGGHHHHTTTSSCCCCEEEEEE-CSSSCCC
T ss_pred HHHHHHHHHhC-----------C-CEEEEEecchhHH-HHH--HHHHHHHHHHHhhhccCCCcCCEEEEEec-cCCCCCC
Confidence 45667777775 2 3444444 77775 333 555542 443 79999888763 3222111
Q ss_pred ccccccChhhhhhcccCCCcEEE-ecCCCHHHHHHHHHHHHHHHHcCCCCEEEE
Q 019523 175 HLRATSDPQIYKKGPAFGMPGFH-VDGMDVLKVREVAKEAIERARRGEGPTLVE 227 (339)
Q Consensus 175 ~~~~~~~~d~~~~a~a~G~~~~~-Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIe 227 (339)
...+ ..+. .+.+ .+|++. +.-.|+.+.+..++.|++ .++|++|-
T Consensus 126 ~~hs--~~~~-a~~~--~iP~l~V~~Psd~~e~~~~l~~a~~----~~~Pv~i~ 170 (324)
T 1w85_B 126 ELHS--DSLE-GLVA--QQPGLKVVIPSTPYDAKGLLISAIR----DNDPVIFL 170 (324)
T ss_dssp TTSS--CCCH-HHHT--TSTTCEEECCSSHHHHHHHHHHHHH----SSSCEEEE
T ss_pred Cccc--ccHH-HHHc--cCCCCEEEeeCCHHHHHHHHHHHHH----cCCCEEEE
Confidence 1111 1222 2222 345543 356788888877766663 67899884
No 86
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=77.45 E-value=12 Score=34.20 Aligned_cols=98 Identities=20% Similarity=0.178 Sum_probs=54.4
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEEE-eCCCCcccchHHHHHHH-HHh--------CCCCEEEEEEcCCeeeccc
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLNM-AAL--------WKLPIVFVVENNLWAIGMS 174 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~-~GDG~~~~g~~~eal~~-A~~--------~~Lpvi~vv~NN~~~i~~~ 174 (339)
.+..|.|+|++ + -++++++ +++.. +.. ++.+.. ++. .++|+++++.. ++.....
T Consensus 63 ~v~~a~G~A~~-----------G-~~p~~~~t~~~F~-~~a--~dqi~~~~a~~~~~~~g~~~~pvv~~~~~-g~~~~~g 126 (324)
T 1umd_B 63 IVGAALGMAAH-----------G-LRPVAEIQFADYI-FPG--FDQLVSQVAKLRYRSGGQFTAPLVVRMPS-GGGVRGG 126 (324)
T ss_dssp HHHHHHHHHHH-----------T-CEEEEECSSGGGC-GGG--HHHHHHTTTTHHHHTTTSSCCCCEEEEEE-CSSSSCG
T ss_pred HHHHHHHHHHC-----------C-CEEEEEeccHhHH-HHH--HHHHHHHHHHHHhhcCCCCcCCEEEEEcC-CCCCCCC
Confidence 45668888876 3 3445544 78875 333 555533 443 79999888763 3222222
Q ss_pred ccccccChhhhhhcccCCCcEE-EecCCCHHHHHHHHHHHHHHHHcCCCCEEEE
Q 019523 175 HLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVE 227 (339)
Q Consensus 175 ~~~~~~~~d~~~~a~a~G~~~~-~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIe 227 (339)
.+.+ ..+. .+.+. +|++ .+.-.|+.+.+..++.|+ +.++|++|-
T Consensus 127 ~~hs--~~~~-a~~~~--iP~~~V~~P~d~~e~~~~l~~a~----~~~~Pv~i~ 171 (324)
T 1umd_B 127 HHHS--QSPE-AHFVH--TAGLKVVAVSTPYDAKGLLKAAI----RDEDPVVFL 171 (324)
T ss_dssp GGSS--CCCH-HHHHT--STTCEEEECCSHHHHHHHHHHHH----HCSSCEEEE
T ss_pred Cccc--hhHH-HHHhc--CCCCEEEEeCCHHHHHHHHHHHH----hcCCCEEEE
Confidence 2212 1232 22222 3443 235567778877776666 367899884
No 87
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=75.88 E-value=7.4 Score=42.62 Aligned_cols=113 Identities=17% Similarity=0.095 Sum_probs=66.2
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecccccccccChhh
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 184 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~ 184 (339)
.+.+++|++++ +.++++.+--.++..- .+.|..++-..+|+|+++.+.. +-++....+....|+
T Consensus 66 A~~aaiGAa~a-------------GaR~~t~Ts~~Gl~lm--~e~l~~~ag~~~P~Vi~va~R~-g~~~glsi~~~hsd~ 129 (1231)
T 2c42_A 66 AAGAVHGALAA-------------GALTTTFTASQGLLLM--IPNMYKISGELLPGVFHVTARA-IAAHALSIFGDHQDI 129 (1231)
T ss_dssp HHHHHHHHHHT-------------TCCEEEEECHHHHHHH--HHHHHHHHHTTCCCEEEEEECC-CCSSSBCCSCCSHHH
T ss_pred HHHHHHHHHHc-------------CChHhhhccHHHHHHH--HHHHHHHhCCCCCEEEEECCCC-ccCCCCcCCCchhhH
Confidence 45678888877 3344444433333322 5667555556899888887775 222211111111232
Q ss_pred hhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeCCCCC
Q 019523 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHS 237 (339)
Q Consensus 185 ~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev~t~r~~gh~ 237 (339)
. .++..|++. +...++.+.+.-+..|.+.+.+.+-|+++-...+| .+|.
T Consensus 130 ~-~ar~~G~~v--l~pss~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~-~sh~ 178 (1231)
T 2c42_A 130 Y-AARQTGFAM--LASSSVQEAHDMALVAHLAAIESNVPFMHFFDGFR-TSHE 178 (1231)
T ss_dssp H-TTTTSSCEE--EECCSHHHHHHHHHHHHHHHHHHCCCEEEEEETTT-TTTC
T ss_pred H-HHhcCCcEE--EECCCHHHHHHHHHHHHHHHHHcCCCEEEEecCcc-cccc
Confidence 1 245556544 45567888888888888888888999987665543 3553
No 88
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=75.41 E-value=14 Score=37.86 Aligned_cols=74 Identities=15% Similarity=0.208 Sum_probs=44.9
Q ss_pred HHHHHHHHhCCCCEEEEEEcCCeeecc--cccccccChhhhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCC--
Q 019523 147 FECLNMAALWKLPIVFVVENNLWAIGM--SHLRATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGE-- 221 (339)
Q Consensus 147 ~eal~~A~~~~Lpvi~vv~NN~~~i~~--~~~~~~~~~d~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~-- 221 (339)
...+.+++..++||+|+....+++.+. +++ .+..|++-+. .+|+++| .-.|..++...++.|++ ..+
T Consensus 472 ~~~ir~~al~~lpvv~v~thdg~gvG~dG~TH--q~ied~a~lr---~iPnl~V~~Pad~~e~~~~l~~Ai~---~~~~~ 543 (700)
T 3rim_A 472 RPAVRLAALMDIDTIYVWTHDSIGLGEDGPTH--QPIEHLSALR---AIPRLSVVRPADANETAYAWRTILA---RRNGS 543 (700)
T ss_dssp HHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--SCSSHHHHHH---TSTTCEEECCSSHHHHHHHHHHHHT---TTTCS
T ss_pred HHHHHHhcCCCCCEEEEEeCCCcccCCCCCcc--CChhHHHHHh---cCCCCEEEeCCCHHHHHHHHHHHHH---ccCCC
Confidence 345778899999999999877755442 322 2334444333 3555544 45677776665555543 234
Q ss_pred CCEEEEE
Q 019523 222 GPTLVEC 228 (339)
Q Consensus 222 gP~lIev 228 (339)
+|++|-.
T Consensus 544 ~Pv~ir~ 550 (700)
T 3rim_A 544 GPVGLIL 550 (700)
T ss_dssp SCEEEEC
T ss_pred CCEEEEe
Confidence 6999853
No 89
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=71.67 E-value=8.7 Score=35.65 Aligned_cols=99 Identities=15% Similarity=0.092 Sum_probs=55.2
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEEE-eCCCCcccchHHHHHH-HHHhC--------CC-CEEEEEEcCCeeecc
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLN-MAALW--------KL-PIVFVVENNLWAIGM 173 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~-~GDG~~~~g~~~eal~-~A~~~--------~L-pvi~vv~NN~~~i~~ 173 (339)
.+..|.|+|++ + -++++++ ++++.. .. ++.+. .++.+ ++ ||++++..-+ ....
T Consensus 79 ~v~~a~G~A~~-----------G-~rp~~~~tf~~F~~-~a--~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g-~~~G 142 (342)
T 2bfd_B 79 IVGFGIGIAVT-----------G-ATAIAEIQFADYIF-PA--FDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGC-VGHG 142 (342)
T ss_dssp HHHHHHHHHHT-----------T-CCEEEECSSGGGCG-GG--HHHHHTTGGGHHHHTTTSSCCTTEEEEEEESC-CSSC
T ss_pred HHHHHHHHHHC-----------C-CeeEEEecchhHHH-HH--HHHHHHHHHHHHhhhcCCccCCCEEEEEecCC-CCCC
Confidence 45677787776 3 3455544 888854 22 45543 44433 44 9999877544 2222
Q ss_pred cccccccChhhhhhcccCCCcEE-EecCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 019523 174 SHLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVEC 228 (339)
Q Consensus 174 ~~~~~~~~~d~~~~a~a~G~~~~-~Vdg~d~~~v~~a~~~A~~~ar~~~gP~lIev 228 (339)
+++. +..|..-+ + .+|++ .+.-.|+.+.+..++.|++ .++|++|-.
T Consensus 143 ~th~--~~~d~~~l-~--~iP~l~V~~Psd~~e~~~~l~~a~~----~~~Pv~i~~ 189 (342)
T 2bfd_B 143 ALYH--SQSPEAFF-A--HCPGIKVVIPRSPFQAKGLLLSCIE----DKNPCIFFE 189 (342)
T ss_dssp GGGS--SCCCHHHH-H--TSTTCEEECCSSHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred cchh--hHhHHHHH-h--cCCCcEEEeeCCHHHHHHHHHHHHh----cCCcEEEEe
Confidence 3222 22333222 2 24444 3356788888877776654 478999843
No 90
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=63.07 E-value=15 Score=31.75 Aligned_cols=56 Identities=20% Similarity=0.179 Sum_probs=37.8
Q ss_pred CCcEEEEEeCCCCcccchHHHHHHHHHhCCCC--EEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecC
Q 019523 128 CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 200 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp--vi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 200 (339)
+.+++|.+.|.|+. .++|--+...+++ |+.|+.|+. ...-.++|+.+|+|++.++-
T Consensus 5 ~~riavl~SG~Gsn-----l~all~~~~~~~~~eI~~Vis~~~------------~a~~~~~A~~~gIp~~~~~~ 62 (215)
T 3tqr_A 5 PLPIVVLISGNGTN-----LQAIIGAIQKGLAIEIRAVISNRA------------DAYGLKRAQQADIPTHIIPH 62 (215)
T ss_dssp CEEEEEEESSCCHH-----HHHHHHHHHTTCSEEEEEEEESCT------------TCHHHHHHHHTTCCEEECCG
T ss_pred CcEEEEEEeCCcHH-----HHHHHHHHHcCCCCEEEEEEeCCc------------chHHHHHHHHcCCCEEEeCc
Confidence 44677778888755 5566666655555 777877763 01124678899999998864
No 91
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=61.00 E-value=20 Score=32.78 Aligned_cols=54 Identities=19% Similarity=0.137 Sum_probs=37.9
Q ss_pred CCCcEEEEEeCCCCcccchHHHHHHHHHhC-CCC--EEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEec
Q 019523 127 DCDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVD 199 (339)
Q Consensus 127 ~~~~~vv~~~GDG~~~~g~~~eal~~A~~~-~Lp--vi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vd 199 (339)
.+.+++|.+.|.|+ .+++|--+.+. .|| |..|+.|+. +...+|+.+|+|++.++
T Consensus 104 ~~~ri~vl~Sg~g~-----nl~~ll~~~~~g~l~~~I~~Visn~~--------------~~~~~A~~~gIp~~~~~ 160 (302)
T 3o1l_A 104 QKKRVVLMASRESH-----CLADLLHRWHSDELDCDIACVISNHQ--------------DLRSMVEWHDIPYYHVP 160 (302)
T ss_dssp SCCEEEEEECSCCH-----HHHHHHHHHHTTCSCSEEEEEEESSS--------------TTHHHHHTTTCCEEECC
T ss_pred CCcEEEEEEeCCch-----hHHHHHHHHHCCCCCcEEEEEEECcH--------------HHHHHHHHcCCCEEEcC
Confidence 35577788888874 36677766554 355 778888774 23456889999999884
No 92
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=60.92 E-value=21 Score=32.29 Aligned_cols=54 Identities=15% Similarity=0.084 Sum_probs=37.3
Q ss_pred CCcEEEEEeCCCCcccchHHHHHHHHHhC-CCC--EEEEEEcC-CeeecccccccccChhhhhhcccCCCcEEEecC
Q 019523 128 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENN-LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 200 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g~~~eal~~A~~~-~Lp--vi~vv~NN-~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 200 (339)
+.+++|.+.|-|+. +++|--+.+. .|| |..|+.|+ . +..++|+.+|+|.+.++-
T Consensus 89 ~~ri~vl~Sg~g~n-----l~~ll~~~~~g~l~~~i~~Visn~p~--------------~~~~~A~~~gIp~~~~~~ 146 (288)
T 3obi_A 89 RRKVMLLVSQSDHC-----LADILYRWRVGDLHMIPTAIVSNHPR--------------ETFSGFDFGDIPFYHFPV 146 (288)
T ss_dssp CEEEEEEECSCCHH-----HHHHHHHHHTTSSCEEEEEEEESSCG--------------GGSCCTTTTTCCEEECCC
T ss_pred CcEEEEEEcCCCCC-----HHHHHHHHHCCCCCeEEEEEEcCCCh--------------hHHHHHHHcCCCEEEeCC
Confidence 44667777887743 6677766554 466 77888887 3 234578899999998753
No 93
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=60.34 E-value=20 Score=32.42 Aligned_cols=53 Identities=17% Similarity=0.137 Sum_probs=37.2
Q ss_pred CCcEEEEEeCCCCcccchHHHHHHHHHhC-CCC--EEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEec
Q 019523 128 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVD 199 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g~~~eal~~A~~~-~Lp--vi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vd 199 (339)
+.+++|.+.|.|+ .+++|--+.+. .|| |+.|+.|+. +...+|+.+|+|++.++
T Consensus 90 ~~ri~vl~Sg~g~-----~l~~ll~~~~~g~l~~~i~~Visn~~--------------~~~~~A~~~gIp~~~~~ 145 (286)
T 3n0v_A 90 RPKVVIMVSKADH-----CLNDLLYRQRIGQLGMDVVAVVSNHP--------------DLEPLAHWHKIPYYHFA 145 (286)
T ss_dssp CCEEEEEESSCCH-----HHHHHHHHHHTTSSCCEEEEEEESSS--------------TTHHHHHHTTCCEEECC
T ss_pred CcEEEEEEeCCCC-----CHHHHHHHHHCCCCCcEEEEEEeCcH--------------HHHHHHHHcCCCEEEeC
Confidence 4567788888874 36677776554 355 788888775 23356888999999875
No 94
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=57.54 E-value=24 Score=31.95 Aligned_cols=56 Identities=14% Similarity=0.051 Sum_probs=37.8
Q ss_pred CCCcEEEEEeCCCCcccchHHHHHHHHHh-CCCC--EEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecC
Q 019523 127 DCDHVTLAFFGDGTCNNGQFFECLNMAAL-WKLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 200 (339)
Q Consensus 127 ~~~~~vv~~~GDG~~~~g~~~eal~~A~~-~~Lp--vi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 200 (339)
.+.+++|.+.|-|+. +++|--+.+ -.|| |+.|+.|+. . . ..++|+.+|+|.+.++-
T Consensus 87 ~~~ri~vl~Sg~g~n-----l~~ll~~~~~g~l~~~i~~Visn~~-~-----------a-~~~~A~~~gIp~~~~~~ 145 (287)
T 3nrb_A 87 DRKKVVIMVSKFDHC-----LGDLLYRHRLGELDMEVVGIISNHP-R-----------E-ALSVSLVGDIPFHYLPV 145 (287)
T ss_dssp CCCEEEEEECSCCHH-----HHHHHHHHHHTSSCCEEEEEEESSC-G-----------G-GCCCCCCTTSCEEECCC
T ss_pred CCcEEEEEEeCCCcC-----HHHHHHHHHCCCCCeEEEEEEeCCh-H-----------H-HHHHHHHcCCCEEEEec
Confidence 345677888888743 666666543 3455 788888875 1 0 44578899999998753
No 95
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=56.30 E-value=20 Score=32.56 Aligned_cols=54 Identities=20% Similarity=0.162 Sum_probs=36.9
Q ss_pred CCCcEEEEEeCCCCcccchHHHHHHHHHhC-CCC--EEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEec
Q 019523 127 DCDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVD 199 (339)
Q Consensus 127 ~~~~~vv~~~GDG~~~~g~~~eal~~A~~~-~Lp--vi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vd 199 (339)
.+.+++|.+.|.|+. +++|--+.+. .|| |..|+.|+. +...+|+.+|+|.+.++
T Consensus 94 ~~~ri~vl~Sg~g~~-----l~~ll~~~~~g~l~~~i~~Visn~~--------------~~~~~A~~~gIp~~~~~ 150 (292)
T 3lou_A 94 ARPKVLIMVSKLEHC-----LADLLFRWKMGELKMDIVGIVSNHP--------------DFAPLAAQHGLPFRHFP 150 (292)
T ss_dssp SCCEEEEEECSCCHH-----HHHHHHHHHHTSSCCEEEEEEESSS--------------TTHHHHHHTTCCEEECC
T ss_pred CCCEEEEEEcCCCcC-----HHHHHHHHHcCCCCcEEEEEEeCcH--------------HHHHHHHHcCCCEEEeC
Confidence 345677888888743 6666665433 355 788888774 22356888999999875
No 96
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=55.33 E-value=23 Score=30.67 Aligned_cols=57 Identities=26% Similarity=0.262 Sum_probs=37.3
Q ss_pred CCcEEEEEeCCCCcccchHHHHHHHHHhC-CCC--EEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCC
Q 019523 128 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGM 201 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g~~~eal~~A~~~-~Lp--vi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~ 201 (339)
+.+++|.+.|.|+. .+++--+... .+| |+.|+.|+.-+ ...++|+.+|+|++.++-.
T Consensus 8 ~~ri~vl~SG~gsn-----l~all~~~~~~~~~~~I~~Vis~~~~a------------~~l~~A~~~gIp~~~~~~~ 67 (215)
T 3kcq_A 8 ELRVGVLISGRGSN-----LEALAKAFSTEESSVVISCVISNNAEA------------RGLLIAQSYGIPTFVVKRK 67 (215)
T ss_dssp CEEEEEEESSCCHH-----HHHHHHHTCCC-CSEEEEEEEESCTTC------------THHHHHHHTTCCEEECCBT
T ss_pred CCEEEEEEECCcHH-----HHHHHHHHHcCCCCcEEEEEEeCCcch------------HHHHHHHHcCCCEEEeCcc
Confidence 45778889999865 4455555443 355 77888776301 1236788999999987643
No 97
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=54.69 E-value=61 Score=26.79 Aligned_cols=72 Identities=11% Similarity=-0.055 Sum_probs=44.8
Q ss_pred CcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeeccccc----------c-----cccChhhhhhcccCCC
Q 019523 129 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHL----------R-----ATSDPQIYKKGPAFGM 193 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~----------~-----~~~~~d~~~~a~a~G~ 193 (339)
...+|.++.||....+...+.+..+...+++|..|-.-+.-+...+.. . ......+..+|+.-|.
T Consensus 111 ~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~L~~iA~~~gG 190 (218)
T 3ibs_A 111 VGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEGMCQEIAKDGKG 190 (218)
T ss_dssp CCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHHHHHHHHHHTEE
T ss_pred CCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCEeEecCCHHHHHHHHHhcCC
Confidence 457899999998887766788888888888876664433101000000 0 1112246677888888
Q ss_pred cEEEecC
Q 019523 194 PGFHVDG 200 (339)
Q Consensus 194 ~~~~Vdg 200 (339)
.++.++.
T Consensus 191 ~~~~~~~ 197 (218)
T 3ibs_A 191 IYVRVDN 197 (218)
T ss_dssp EEEEECS
T ss_pred EEEECCC
Confidence 8888865
No 98
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=54.50 E-value=44 Score=28.68 Aligned_cols=56 Identities=27% Similarity=0.230 Sum_probs=37.4
Q ss_pred CCcEEEEEeCCCCcccchHHHHHHHHHhC-CCC--EEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecC
Q 019523 128 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 200 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g~~~eal~~A~~~-~Lp--vi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 200 (339)
+.+++|.+.|.|+. .+++--+... ++| |+.|+.|+.-+ .-.++|+.+|+|++.++-
T Consensus 7 ~~ri~vl~SG~gsn-----l~all~~~~~~~l~~~I~~Visn~~~a------------~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 7 RNRVVIFISGGGSN-----MEALIRAAQAPGFPAEIVAVFSDKAEA------------GGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp CEEEEEEESSCCHH-----HHHHHHHHTSTTCSEEEEEEEESCTTC------------THHHHHHHTTCCEEECCG
T ss_pred CccEEEEEECCcHH-----HHHHHHHHHcCCCCcEEEEEEECCccc------------HHHHHHHHcCCCEEEeCc
Confidence 34678889999865 4455555544 355 77888776301 113688899999998864
No 99
>2zzd_B Thiocyanate hydrolase subunit beta; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dd4_B 2dxb_B 2dd5_B* 2dxc_B*
Probab=51.30 E-value=21 Score=29.32 Aligned_cols=32 Identities=16% Similarity=0.255 Sum_probs=27.6
Q ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHH
Q 019523 259 ITALKKYLIESSLASEAELKAIEKKIDEVVED 290 (339)
Q Consensus 259 l~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~ 290 (339)
|..+.+.|++.|+++++|+++..++++++.+.
T Consensus 113 L~ALe~lLvekGvit~~EL~ar~aEv~ar~~~ 144 (157)
T 2zzd_B 113 LLTAARILVDKQFVTLTELHNKIVEMRERVAS 144 (157)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHhhhc
Confidence 56788999999999999999988888887643
No 100
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=50.04 E-value=31 Score=29.69 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=36.5
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhC-CCC--EEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecC
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 200 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~-~Lp--vi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 200 (339)
+++|.+.|-|+. +++|--+... .+| |+.|+.|+. .....++|+.+|+|++.++-
T Consensus 4 riavl~Sg~Gsn-----l~ali~~~~~~~l~~eI~~Visn~~------------~a~v~~~A~~~gIp~~~~~~ 60 (211)
T 3p9x_A 4 RVAIFASGSGTN-----AEAIIQSQKAGQLPCEVALLITDKP------------GAKVVERVKVHEIPVCALDP 60 (211)
T ss_dssp EEEEECCTTCHH-----HHHHHHHHHTTCCSSEEEEEEESCS------------SSHHHHHHHTTTCCEEECCG
T ss_pred EEEEEEeCCchH-----HHHHHHHHHcCCCCcEEEEEEECCC------------CcHHHHHHHHcCCCEEEeCh
Confidence 466777776633 6677766644 355 788888764 12355788999999987753
No 101
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=48.79 E-value=69 Score=24.94 Aligned_cols=94 Identities=19% Similarity=0.230 Sum_probs=55.2
Q ss_pred EEEEEeCCCCcc-cchHHHHHHHHHhCCCCEEEEEEcCCeeecc---cccccc--------------cChhhhhhcccCC
Q 019523 131 VTLAFFGDGTCN-NGQFFECLNMAALWKLPIVFVVENNLWAIGM---SHLRAT--------------SDPQIYKKGPAFG 192 (339)
Q Consensus 131 ~vv~~~GDG~~~-~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~---~~~~~~--------------~~~d~~~~a~a~G 192 (339)
.++.|-||---. +-..-|-+.-|..+.-.|.+-+.-|..-|-. |.+-.. -+..|.-+..+-|
T Consensus 4 m~i~f~gddlea~ekalkemirqarkfagtvtytl~gn~l~i~itgvpeqvrkelakeaerl~~efni~v~y~imgsgsg 83 (170)
T 4hhu_A 4 MVIVFEGDDLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVITGVPEQVRKELAKEAERLKAEFNINVQYQIMGSGSG 83 (170)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEESCCHHHHHHHHHHHHHHHHHHTCEEEEEEECTTCC
T ss_pred EEEEEecCcHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEeCCcHHHHHHHHHHHHHHHHhcceEEEEEEEeCCce
Confidence 467777876211 1111222223334444477777777644421 211000 0112333445667
Q ss_pred CcEEEecCCCHHHHHHHHHHHHHHHHcCCCCE
Q 019523 193 MPGFHVDGMDVLKVREVAKEAIERARRGEGPT 224 (339)
Q Consensus 193 ~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~ 224 (339)
.-.++..|.|.+++..++++-++.+|+..|.+
T Consensus 84 vm~i~f~gddlea~ekalkemirqarkfagtv 115 (170)
T 4hhu_A 84 VMVIVFEGDDLEALEKALKEMIRQARKFAGTV 115 (170)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred EEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 77778899999999999999999999988754
No 102
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=46.71 E-value=38 Score=29.21 Aligned_cols=52 Identities=21% Similarity=0.239 Sum_probs=34.1
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCCC--EEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEec
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVD 199 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~Lp--vi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vd 199 (339)
+++|.+.|-|+. +++|--+...+++ |+.|+.|+. . ...++|+.+|+|++.++
T Consensus 14 ri~vl~SG~gsn-----l~all~~~~~~~~~eI~~Vis~~~-a------------~~~~~A~~~gIp~~~~~ 67 (215)
T 3da8_A 14 RLVVLASGTGSL-----LRSLLDAAVGDYPARVVAVGVDRE-C------------RAAEIAAEASVPVFTVR 67 (215)
T ss_dssp EEEEEESSCCHH-----HHHHHHHSSTTCSEEEEEEEESSC-C------------HHHHHHHHTTCCEEECC
T ss_pred EEEEEEeCChHH-----HHHHHHHHhccCCCeEEEEEeCCc-h------------HHHHHHHHcCCCEEEeC
Confidence 566666788754 5555555433454 777777654 1 12568889999999885
No 103
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=46.28 E-value=64 Score=26.19 Aligned_cols=82 Identities=12% Similarity=0.103 Sum_probs=44.0
Q ss_pred CcEEEEEeCCCCcccc--hHHHHHHHHHhCCCCEEEEEEcCCeeecccccccccChhhhhhcccCCCc-EEEecCCCHHH
Q 019523 129 DHVTLAFFGDGTCNNG--QFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMP-GFHVDGMDVLK 205 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g--~~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~-~~~Vdg~d~~~ 205 (339)
.+.+++++.||....+ ...+.+..+...+++|..|-.-+. .........+..+|..-|.. .+.++..+ +
T Consensus 110 ~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~------~~~~~~~~~L~~iA~~~~g~~~~~~~~~~--~ 181 (198)
T 1n3y_A 110 AAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLA------FQNRNSWKELNDIASKPSQEHIFKVEDFD--A 181 (198)
T ss_dssp SEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGG------GGSSTTHHHHHHHSCSSSGGGEEEESSGG--G
T ss_pred CceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEcccc------ccccccHHHHHHHHcCCCcccEEEeCCHH--H
Confidence 3578899999987633 235667777788887665533221 10000123455666654444 46775432 4
Q ss_pred HHHHHHHHHHHHH
Q 019523 206 VREVAKEAIERAR 218 (339)
Q Consensus 206 v~~a~~~A~~~ar 218 (339)
+...+.+..+...
T Consensus 182 l~~~~~~i~~~ic 194 (198)
T 1n3y_A 182 LKDIQNQLKEKIF 194 (198)
T ss_dssp GGGGHHHHHHHHH
T ss_pred HHHHHHHHHhhee
Confidence 4444444444433
No 104
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=44.84 E-value=26 Score=30.03 Aligned_cols=55 Identities=15% Similarity=0.230 Sum_probs=34.7
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCC--CEEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecC
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKL--PIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 200 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~L--pvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 200 (339)
+++|.++|.|++... .|......++ .|+.|+.|+. .....++|+.+|+|.+.++.
T Consensus 5 ki~vl~sG~g~~~~~----~l~~l~~~~l~~~I~~Vit~~~------------~~~v~~~A~~~gIp~~~~~~ 61 (212)
T 3av3_A 5 RLAVFASGSGTNFQA----IVDAAKRGDLPARVALLVCDRP------------GAKVIERAARENVPAFVFSP 61 (212)
T ss_dssp EEEEECCSSCHHHHH----HHHHHHTTCCCEEEEEEEESST------------TCHHHHHHHHTTCCEEECCG
T ss_pred EEEEEEECCcHHHHH----HHHHHHhCCCCCeEEEEEeCCC------------CcHHHHHHHHcCCCEEEeCc
Confidence 577888999876433 2222223333 4777777653 12455788999999997754
No 105
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=42.09 E-value=84 Score=32.96 Aligned_cols=106 Identities=9% Similarity=-0.017 Sum_probs=56.0
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccch---HHHHHHHH---HhCCCCEEEEEEcCCeeeccccccc
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQ---FFECLNMA---ALWKLPIVFVVENNLWAIGMSHLRA 178 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~---~~eal~~A---~~~~Lpvi~vv~NN~~~i~~~~~~~ 178 (339)
.++.|+|+|++ ++..+++.-+-=|.|..+. +-|=++.+ ...++||++++-.-+++ ..+.+.+
T Consensus 596 ~vG~a~G~A~~-----------G~~~~~i~eaqf~dF~~~AQ~~~DQ~i~~~~~k~~~~~~vvi~~p~G~~G-~Gp~Hs~ 663 (868)
T 2yic_A 596 AVGFEYGYSVG-----------NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEG-QGPDHTS 663 (868)
T ss_dssp HHHHHHHHHHH-----------CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSS-SCTTSSC
T ss_pred HHHHHHHHHcc-----------CCCCceEEEEehHHHHhhHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCC-CChhhcC
Confidence 35677888877 6655555554445566553 22222222 12388998888854433 2232222
Q ss_pred ccChhhhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEE
Q 019523 179 TSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVE 227 (339)
Q Consensus 179 ~~~~d~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIe 227 (339)
....++..+ ..+|+++| .-.|+.+....++.++. +..++|++|-
T Consensus 664 ~~~E~~l~l---~~~pnm~V~~Ps~p~~~~~lLr~a~~--~~~~~Pvii~ 708 (868)
T 2yic_A 664 GRIERFLQL---WAEGSMTIAMPSTPANYFHLLRRHGK--DGIQRPLIVF 708 (868)
T ss_dssp CCHHHHHHH---CCTTSCEEECCCSHHHHHHHHHHHHH--SSCCCCEEEE
T ss_pred CcHHHHHhc---CCCCCCEEEEeCCHHHHHHHHHHHHh--cCCCCcEEEE
Confidence 223344433 34455544 55677777765555442 2245898773
No 106
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=41.85 E-value=80 Score=33.44 Aligned_cols=103 Identities=14% Similarity=0.090 Sum_probs=52.9
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEE--EeCCCCcccc--hHHHHH-HHH-Hh--CCCCEEEEEEcCCeeeccccc
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLA--FFGDGTCNNG--QFFECL-NMA-AL--WKLPIVFVVENNLWAIGMSHL 176 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~--~~GDG~~~~g--~~~eal-~~A-~~--~~Lpvi~vv~NN~~~i~~~~~ 176 (339)
.++.|.|+|++ ++...+|+ .+|| |..+ ..+.-+ +.+ +. .++||++++.. +|.-..+.+
T Consensus 664 ~vg~a~G~A~~-----------G~~~lpv~e~qf~d--F~~~AQra~DQii~~~~ak~~~~~~vv~~l~~-G~~g~G~~H 729 (933)
T 2jgd_A 664 VLAFEYGYATA-----------EPRTLTIWEAQFGD--FANGAQVVIDQFISSGEQKWGRMCGLVMLLPH-GYEGQGPEH 729 (933)
T ss_dssp HHHHHHHHHHH-----------CTTSEEEEEC-CGG--GGGGGHHHHHHTTTTHHHHHCCCCCCEEEEEC-CCSSSCTTS
T ss_pred HHHHHHHHHhc-----------CCCCCCEEEEEEhh--hhcccHHHHHHHHHHHHHHHccCCCEEEEEeC-CCCCCCccc
Confidence 35667777776 55533433 4555 4443 223333 233 33 48999888886 443222322
Q ss_pred ccccChhhhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEE
Q 019523 177 RATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLV 226 (339)
Q Consensus 177 ~~~~~~d~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lI 226 (339)
.+....++ .....+|.++| .-.|+.+....++.++. +..++|++|
T Consensus 730 ss~~~E~~---l~~~~~pnm~V~~Pst~~e~~~lLr~a~~--~~~~~Pvii 775 (933)
T 2jgd_A 730 SSARLERY---LQLCAEQNMQVCVPSTPAQVYHMLRRQAL--RGMRRPLVV 775 (933)
T ss_dssp SCCCHHHH---HHTCCTTCCEEECCCSHHHHHHHHHHHHH--SSCCCCEEE
T ss_pred ccchHHHH---HHHhCCCCeEEEecCCHHHHHHHHHHHHH--hcCCCcEEE
Confidence 22122333 33344455544 55677777665544421 234799998
No 107
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=40.74 E-value=87 Score=33.85 Aligned_cols=106 Identities=9% Similarity=-0.017 Sum_probs=56.9
Q ss_pred chHHHHHHHHHHHHhhhhhhccCCCcEEEEEeCCCCcccch---HHHHHHHH---HhCCCCEEEEEEcCCeeeccccccc
Q 019523 105 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQ---FFECLNMA---ALWKLPIVFVVENNLWAIGMSHLRA 178 (339)
Q Consensus 105 ~~p~AiG~a~A~k~~~~~~~~~~~~~~vv~~~GDG~~~~g~---~~eal~~A---~~~~Lpvi~vv~NN~~~i~~~~~~~ 178 (339)
.++.|.|+|++ ++..+++.-+-=|.|..+. +-|=++.+ ...++||++.+-.-+.+ ..+.+.+
T Consensus 841 ~vg~a~G~A~~-----------G~~~~~i~Eaqf~dF~~~aQ~~~DQ~i~~~~~k~~~~~~vv~~lp~G~~G-~G~~Hs~ 908 (1113)
T 2xt6_A 841 AVGFEYGYSVG-----------NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEG-QGPDHTS 908 (1113)
T ss_dssp HHHHHHHHHHH-----------CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSS-SCTTSSC
T ss_pred HHHHHHHHHhc-----------CCCCceEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCCC-CChhhhc
Confidence 46677788777 6665555544445566553 33322222 12388999888854423 2232222
Q ss_pred ccChhhhhhcccCCCcEEEe-cCCCHHHHHHHHHHHHHHHHcCCCCEEEE
Q 019523 179 TSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVE 227 (339)
Q Consensus 179 ~~~~d~~~~a~a~G~~~~~V-dg~d~~~v~~a~~~A~~~ar~~~gP~lIe 227 (339)
....++..+ ..+|+++| .-.|+.+....++.++. +..++|++|-
T Consensus 909 ~~~E~~l~l---~~~pnm~V~~Ps~~~~~~~lLr~a~~--~~~~~Pvii~ 953 (1113)
T 2xt6_A 909 GRIERFLQL---WAEGSMTIAMPSTPANYFHLLRRHGK--DGIQRPLIVF 953 (1113)
T ss_dssp CCHHHHHHH---CCTTSCEEECCSSHHHHHHHHHHHHH--SSCCCCEEEE
T ss_pred ccHHHHHhc---CCCCCcEEEecCCHHHHHHHHHHHHh--ccCCCCEEEE
Confidence 223344332 34455544 55677777766655443 2245898873
No 108
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=37.75 E-value=42 Score=28.14 Aligned_cols=33 Identities=3% Similarity=-0.093 Sum_probs=21.7
Q ss_pred EEEEEeCCCCcccchHHHHHHHHHhCCCCEEEE
Q 019523 131 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFV 163 (339)
Q Consensus 131 ~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~v 163 (339)
+++.+.||+....+...+....+...+..|.+|
T Consensus 109 iiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~I 141 (192)
T 2x5n_A 109 IVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDII 141 (192)
T ss_dssp EEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEEECCCCCCchhHHHHHHHHHHCCCEEEEE
Confidence 355555666444555667777778888887766
No 109
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=36.20 E-value=41 Score=26.26 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=28.4
Q ss_pred CCcEEEecCCCHHHHHHHHHHHHHHHHcCCCCE
Q 019523 192 GMPGFHVDGMDVLKVREVAKEAIERARRGEGPT 224 (339)
Q Consensus 192 G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~ 224 (339)
|.-.++..|.|.+++..++++-++.+|+..|.+
T Consensus 2 gvm~i~f~gddlea~ekalkemirqarkfagtv 34 (170)
T 4hhu_A 2 GVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 34 (170)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred ceEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 555677889999999999999999999988754
No 110
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=35.64 E-value=42 Score=28.35 Aligned_cols=38 Identities=18% Similarity=0.291 Sum_probs=31.4
Q ss_pred CcEEEEEeCCCCcccchHHHHHHHHH-hCCCCEEEEEEc
Q 019523 129 DHVTLAFFGDGTCNNGQFFECLNMAA-LWKLPIVFVVEN 166 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~~~eal~~A~-~~~Lpvi~vv~N 166 (339)
-..+|+++|+=.-...-+..|+..|. ..++|||.|..+
T Consensus 80 Sk~vIllIs~~T~~s~~v~wEIe~Ai~~~~~PII~Vy~~ 118 (189)
T 3hyn_A 80 SKNIILFLSSITANSRALREEMNYGIGTKGLPVIVIYPD 118 (189)
T ss_dssp EEEEEEECCTTCCCCHHHHHHHHHHTTTTCCCEEEEETT
T ss_pred cCcEEEEEecCccccchhHHHHHHHHHhcCCcEEEEECC
Confidence 46789999999877445566999999 999999988766
No 111
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=35.19 E-value=1.3e+02 Score=25.60 Aligned_cols=54 Identities=19% Similarity=0.206 Sum_probs=36.1
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhC---CCCEEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecC
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALW---KLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 200 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~---~Lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 200 (339)
+++|.+.|.|+. +++|--+... +..|+.||.|+. .+...++|+.+|+|++.++-
T Consensus 2 riaVl~SG~Gs~-----L~aLi~~~~~~~~~~~I~~Vvs~~~------------~~~~~~~A~~~gIp~~~~~~ 58 (209)
T 1meo_A 2 RVAVLISGTGSN-----LQALIDSTREPNSSAQIDIVISNKA------------AVAGLDKAERAGIPTRVINH 58 (209)
T ss_dssp EEEEEESSSCTT-----HHHHHHHHHSTTCSCEEEEEEESST------------TCHHHHHHHHTTCCEEECCG
T ss_pred eEEEEEECCchH-----HHHHHHHHhcCCCCcEEEEEEeCCC------------ChHHHHHHHHcCCCEEEECc
Confidence 578888999975 5555554433 344788887764 11224678899999997754
No 112
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=34.52 E-value=39 Score=29.03 Aligned_cols=56 Identities=11% Similarity=0.131 Sum_probs=33.8
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCC--CEEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCC
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKL--PIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGM 201 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~L--pvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~ 201 (339)
++++.+.|.|++... .|......++ .++.|+.|+. .....++|+.+|+|.+.++-.
T Consensus 3 rI~vl~SG~g~~~~~----~l~~l~~~~~~~~i~~Vvs~~~------------~~~~~~~A~~~gIp~~~~~~~ 60 (216)
T 2ywr_A 3 KIGVLVSGRGSNLQA----IIDAIESGKVNASIELVISDNP------------KAYAIERCKKHNVECKVIQRK 60 (216)
T ss_dssp EEEEEECSCCHHHHH----HHHHHHTTSSCEEEEEEEESCT------------TCHHHHHHHHHTCCEEECCGG
T ss_pred EEEEEEeCCcHHHHH----HHHHHHhCCCCCeEEEEEeCCC------------ChHHHHHHHHcCCCEEEeCcc
Confidence 456666688865433 2222233345 4677777753 123457888999999987543
No 113
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=32.81 E-value=60 Score=25.13 Aligned_cols=46 Identities=17% Similarity=0.336 Sum_probs=37.2
Q ss_pred hhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHc--CCCCEEEEEEE
Q 019523 185 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARR--GEGPTLVECET 230 (339)
Q Consensus 185 ~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~--~~gP~lIev~t 230 (339)
.-+...+++..+.+...|+.++.+.+.+-++.+-. .+.|++|++..
T Consensus 9 elKG~~~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~ 56 (120)
T 3ghf_A 9 ELKGSSFTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSG 56 (120)
T ss_dssp CCCCCCCCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEE
T ss_pred EEEcCeeeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccc
Confidence 34556788889999999999999999988887754 46699999953
No 114
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=30.52 E-value=49 Score=32.59 Aligned_cols=43 Identities=19% Similarity=0.174 Sum_probs=32.5
Q ss_pred CcEEEEEeCCCCcccch--------HHHHHHHHHhCCCCEEEEEEcCCeee
Q 019523 129 DHVTLAFFGDGTCNNGQ--------FFECLNMAALWKLPIVFVVENNLWAI 171 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~--------~~eal~~A~~~~Lpvi~vv~NN~~~i 171 (339)
++.|+++.-|..++.|. +..++.+|.+.++|+|+++.+.+-.+
T Consensus 90 Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~~P~I~l~~SGGaRm 140 (522)
T 1x0u_A 90 GRTVFAYAQDFTVLGGSLGETHANKIVRAYELALKVGAPVVGINDSGGARI 140 (522)
T ss_dssp TEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCSBCG
T ss_pred CEEEEEEEecCceeCccccHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCCh
Confidence 56788888888877665 55677888889999888887666333
No 115
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=29.97 E-value=62 Score=22.35 Aligned_cols=29 Identities=28% Similarity=0.371 Sum_probs=24.8
Q ss_pred EEecCCCHHHHHHHHHHHHHHHHcCCCCE
Q 019523 196 FHVDGMDVLKVREVAKEAIERARRGEGPT 224 (339)
Q Consensus 196 ~~Vdg~d~~~v~~a~~~A~~~ar~~~gP~ 224 (339)
++..|.|.++...++++-++.+|+..|.+
T Consensus 5 irfrgddleafekalkemirqarkfagtv 33 (85)
T 2kl8_A 5 IRFRGDDLEAFEKALKEMIRQARKFAGTV 33 (85)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTTTCEE
T ss_pred eeecCCcHHHHHHHHHHHHHHHHhhcceE
Confidence 45678999999999999999999988754
No 116
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=29.65 E-value=55 Score=32.22 Aligned_cols=44 Identities=23% Similarity=0.153 Sum_probs=34.1
Q ss_pred CCcEEEEEeCCCCcccch--------HHHHHHHHHhCCCCEEEEEEcCCeee
Q 019523 128 CDHVTLAFFGDGTCNNGQ--------FFECLNMAALWKLPIVFVVENNLWAI 171 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g~--------~~eal~~A~~~~Lpvi~vv~NN~~~i 171 (339)
.++.|+++.-|..++.|. +..++.+|...++|+|+++.+.+-.+
T Consensus 93 ~Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~~SGGARm 144 (523)
T 1on3_A 93 LGRPVHAASQDFTVMGGSAGETQSTKVVETMEQALLTGTPFLFFYDSGGARI 144 (523)
T ss_dssp TTEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCG
T ss_pred CCEEEEEEEEcCCccCCcCcHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCCh
Confidence 357888888898887765 55678888899999999988776433
No 117
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=28.90 E-value=1.2e+02 Score=28.98 Aligned_cols=60 Identities=15% Similarity=0.095 Sum_probs=33.3
Q ss_pred HHHH-HHhCCCCEEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCCC
Q 019523 149 CLNM-AALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEG 222 (339)
Q Consensus 149 al~~-A~~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~g 222 (339)
++.. |...++|+++|+-.+- ...-....++||..++.+++.+ ...++.+.+.+.+.+..+
T Consensus 189 AlA~aAa~~Gl~~~IvmP~~~------------s~~k~~~~r~~GAeVv~v~~~~--~~~~a~~~a~el~~~~~~ 249 (430)
T 4aec_A 189 GLAFIAASRGYRLILTMPASM------------SMERRVLLKAFGAELVLTDPAK--GMTGAVQKAEEILKNTPD 249 (430)
T ss_dssp HHHHHHHHHTCEEEEEEETTS------------CHHHHHHHHHTTCEEEEECGGG--HHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHhCCEEEEEEcCCC------------CHHHHHHHHHCCCEEEEECCCC--ChHHHHHHHHHHHHhcCC
Confidence 3444 5678999887775542 1122345678899888887532 122233444444444334
No 118
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=28.77 E-value=72 Score=27.66 Aligned_cols=55 Identities=16% Similarity=0.273 Sum_probs=32.0
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCCC--CEEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecC
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWKL--PIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 200 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~L--pvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 200 (339)
++++.+.|.|++... .|.......+ .|+.||.|+. .....++|+.+|+|++.++-
T Consensus 24 rI~~l~SG~g~~~~~----~l~~l~~~~~~~~I~~Vvt~~~------------~~~~~~~A~~~gIp~~~~~~ 80 (229)
T 3auf_A 24 RIGVLISGSGTNLQA----ILDGCREGRIPGRVAVVISDRA------------DAYGLERARRAGVDALHMDP 80 (229)
T ss_dssp EEEEEESSCCHHHHH----HHHHHHTTSSSEEEEEEEESST------------TCHHHHHHHHTTCEEEECCG
T ss_pred EEEEEEeCCcHHHHH----HHHHHHhCCCCCeEEEEEcCCC------------chHHHHHHHHcCCCEEEECc
Confidence 455555688865432 2222223333 4777777653 11245788899999997754
No 119
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=28.69 E-value=89 Score=26.65 Aligned_cols=54 Identities=13% Similarity=0.197 Sum_probs=35.5
Q ss_pred cEEEEEeCCCCcccchHHHHHHHHHhCC-C--CEEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecC
Q 019523 130 HVTLAFFGDGTCNNGQFFECLNMAALWK-L--PIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 200 (339)
Q Consensus 130 ~~vv~~~GDG~~~~g~~~eal~~A~~~~-L--pvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 200 (339)
+++|.+.|.|+. .++|--+...+ + .|+.|+.|+. .....++|+.+|+|.+.++-
T Consensus 2 ri~vl~Sg~gsn-----l~ali~~~~~~~~~~~i~~Vis~~~------------~~~~~~~A~~~gIp~~~~~~ 58 (212)
T 1jkx_A 2 NIVVLISGNGSN-----LQAIIDACKTNKIKGTVRAVFSNKA------------DAFGLERARQAGIATHTLIA 58 (212)
T ss_dssp EEEEEESSCCHH-----HHHHHHHHHTTSSSSEEEEEEESCT------------TCHHHHHHHHTTCEEEECCG
T ss_pred EEEEEEECCcHH-----HHHHHHHHHcCCCCceEEEEEeCCC------------chHHHHHHHHcCCcEEEeCc
Confidence 467888888853 55565554333 3 3777877753 11235788899999998763
No 120
>1ugp_A NitrIle hydratase alpha subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: d.149.1.1 PDB: 1ire_A 1ugr_A 1ugq_A 1ugs_A
Probab=27.85 E-value=83 Score=26.66 Aligned_cols=29 Identities=17% Similarity=0.350 Sum_probs=24.8
Q ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHH
Q 019523 259 ITALKKYLIESSLASEAELKAIEKKIDEV 287 (339)
Q Consensus 259 l~~~~~~L~~~g~~~~~~~~~i~~~~~~~ 287 (339)
+..++..|+++|+++.++++.+.+.+...
T Consensus 20 ~~AL~~lL~eKGli~~~~id~~~~~~e~~ 48 (203)
T 1ugp_A 20 VKALESMLIEQGILTTSMIDRMAEIYENE 48 (203)
T ss_dssp HHHHHHHHHHTTSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHhcc
Confidence 35788999999999999999988877666
No 121
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=27.46 E-value=1.2e+02 Score=30.06 Aligned_cols=43 Identities=16% Similarity=0.248 Sum_probs=32.7
Q ss_pred CcEEEEEeCCCCcccch--------HHHHHHHHHhCCCCEEEEEEcCCeee
Q 019523 129 DHVTLAFFGDGTCNNGQ--------FFECLNMAALWKLPIVFVVENNLWAI 171 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~--------~~eal~~A~~~~Lpvi~vv~NN~~~i 171 (339)
++.|+++.-|..+..|. +.-++.+|.+.++|+|.++++-+-.+
T Consensus 120 Gr~v~V~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~~lPvI~l~dSgGARl 170 (555)
T 3u9r_B 120 GVECMIVGNDATVKGGTYYPLTVKKHLRAQAIALENRLPCIYLVDSGGANL 170 (555)
T ss_dssp TEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCG
T ss_pred CEEEEEEEECCccccCCCCHHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC
Confidence 56788888897776553 23567889999999999998877444
No 122
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=26.87 E-value=68 Score=28.62 Aligned_cols=36 Identities=0% Similarity=-0.039 Sum_probs=22.8
Q ss_pred CcEEEEEeCCCCcccchHHHHHHHHHhCCCCEEEEE
Q 019523 129 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVV 164 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv 164 (339)
.++++++.||+....+........+...++.|-+|-
T Consensus 108 ~rIIlf~ds~~~~~~~~l~~lak~lkk~gI~v~vIg 143 (268)
T 4b4t_W 108 QRIVAFVCSPISDSRDELIRLAKTLKKNNVAVDIIN 143 (268)
T ss_dssp EEEEEEECSCCSSCHHHHHHHHHHHHHHTEEEEEEE
T ss_pred eEEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 345556668887766665555566667777755553
No 123
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=26.54 E-value=62 Score=32.06 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=34.3
Q ss_pred CCcEEEEEeCCCCcccch--------HHHHHHHHHhCCCCEEEEEEcCCeee
Q 019523 128 CDHVTLAFFGDGTCNNGQ--------FFECLNMAALWKLPIVFVVENNLWAI 171 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g~--------~~eal~~A~~~~Lpvi~vv~NN~~~i 171 (339)
.++.|+++.-|..+..|. +..++.+|.+.++|+|+++.+-+-.+
T Consensus 106 ~Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~dSGGARm 157 (548)
T 2bzr_A 106 DGRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLIGINDGAGARI 157 (548)
T ss_dssp TTEEEEEEEECTTSGGGCCCHHHHHHHHHHHHHHHHHTCCEEEEECCCSCCG
T ss_pred CCEEEEEEEEcCccccCCCChhHHHHHHHHHHHHHHcCCCEEEEEcCCCCCc
Confidence 367888999998887665 55678889999999999888776433
No 124
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=26.15 E-value=1.6e+02 Score=26.48 Aligned_cols=57 Identities=16% Similarity=0.121 Sum_probs=33.9
Q ss_pred EEEEeCCCCcccchHHHHHHH-HHhCCCCEEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCCC
Q 019523 132 TLAFFGDGTCNNGQFFECLNM-AALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMD 202 (339)
Q Consensus 132 vv~~~GDG~~~~g~~~eal~~-A~~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d 202 (339)
.|+..|-.+-+.| .++.+ |...++|+++|+-.+- ..+.-....++||..++.+++..
T Consensus 72 ~vv~~G~ssGN~g---~alA~~a~~~G~~~~iv~p~~~-----------~~~~k~~~~~~~GA~v~~~~~~~ 129 (325)
T 1j0a_A 72 VVITVGAVHSNHA---FVTGLAAKKLGLDAILVLRGKE-----------ELKGNYLLDKIMGIETRVYDAKD 129 (325)
T ss_dssp EEEEECCTTCHHH---HHHHHHHHHTTCEEEEEEESCC-----------CSCHHHHHHHHTTCEEEEESCCS
T ss_pred EEEEcCCcchHHH---HHHHHHHHHhCCcEEEEECCCC-----------CCCchHHHHHHCCCEEEEeCcch
Confidence 4445544444444 34444 5689999888876643 01223355678888888887654
No 125
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=25.85 E-value=75 Score=22.35 Aligned_cols=26 Identities=12% Similarity=0.365 Sum_probs=19.2
Q ss_pred ChHHHHHHHHHHcCcccHHHHHHHHHH
Q 019523 257 DPITALKKYLIESSLASEAELKAIEKK 283 (339)
Q Consensus 257 dPl~~~~~~L~~~g~~~~~~~~~i~~~ 283 (339)
-|+..=..+|...| +|++||++.-++
T Consensus 33 sp~~~K~~FL~sKG-Lt~eEI~~Al~r 58 (70)
T 2w84_A 33 SPLATRRAFLKKKG-LTDEEIDMAFQQ 58 (70)
T ss_dssp SCHHHHHHHHHHTT-CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcC-CCHHHHHHHHHH
Confidence 57888888888888 688887654443
No 126
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=25.82 E-value=50 Score=34.26 Aligned_cols=45 Identities=22% Similarity=0.242 Sum_probs=35.9
Q ss_pred CCcEEEEEeCCCCcccchH--------HHHHHHHHhCCCCEEEEEEcCCeeec
Q 019523 128 CDHVTLAFFGDGTCNNGQF--------FECLNMAALWKLPIVFVVENNLWAIG 172 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g~~--------~eal~~A~~~~Lpvi~vv~NN~~~i~ 172 (339)
.++.|+++.-|-.++.|.+ ..++.+|...++|+|+++.|-+..++
T Consensus 119 ~Gr~vvVianD~t~~gGS~g~~~~~K~~ra~elA~~~glP~I~l~dsgGARig 171 (793)
T 2x24_A 119 EGRDIILISNDITFRIGSFGPGEDLLYLRASELARAEGIPRVYLAANSGARIG 171 (793)
T ss_dssp TCEEEEEEEECSSGGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCCC
T ss_pred CCeEEEEEEECCcccCCCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCcCcc
Confidence 3678899999987776643 45788999999999999998886664
No 127
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=25.00 E-value=2e+02 Score=25.42 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=28.0
Q ss_pred EEEeCCCCcc--cchHHHHHHHHHhCCCCEEEEEEcC
Q 019523 133 LAFFGDGTCN--NGQFFECLNMAALWKLPIVFVVENN 167 (339)
Q Consensus 133 v~~~GDG~~~--~g~~~eal~~A~~~~Lpvi~vv~NN 167 (339)
|+|--||+.. +|.+.-+|.+|..+. .|.|+|.+.
T Consensus 3 i~ir~Da~~~IG~GHvmRcl~LA~~l~-~v~F~~~~~ 38 (282)
T 3hbm_A 3 VLFRSDSSSQIGFGHIKRDLVLAKQYS-DVSFACLPL 38 (282)
T ss_dssp EEEEECCBTTTBSHHHHHHHHHHTTCS-SEEEEECCC
T ss_pred EEEEEecCCCccccHHHHHHHHHHHHH-hCEEEEecC
Confidence 5666788855 889999999999999 999998654
No 128
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=24.96 E-value=70 Score=27.67 Aligned_cols=82 Identities=11% Similarity=0.035 Sum_probs=51.8
Q ss_pred EEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecccccc--------cccChhhhhhcccCCCcEEEecCCCHH
Q 019523 133 LAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLR--------ATSDPQIYKKGPAFGMPGFHVDGMDVL 204 (339)
Q Consensus 133 v~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~~--------~~~~~d~~~~a~a~G~~~~~Vdg~d~~ 204 (339)
|+++|=+....+ .-.+....++++.+...+|...+...... -....-..+.|+-+|++++.+.+ .+
T Consensus 109 IavVg~~~~~~~----~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~vVVG~~~~~~~A~~~Gl~~vlI~s--~e 182 (225)
T 2pju_A 109 IGVVTYQETIPA----LVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYS--AA 182 (225)
T ss_dssp EEEEEESSCCHH----HHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEESHHHHHHHHHTTSEEEESSC--HH
T ss_pred EEEEeCchhhhH----HHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHcCCcEEEECC--HH
Confidence 455555555444 33456677888777777764222111000 01233456788899999999995 47
Q ss_pred HHHHHHHHHHHHHHcC
Q 019523 205 KVREVAKEAIERARRG 220 (339)
Q Consensus 205 ~v~~a~~~A~~~ar~~ 220 (339)
++..|+.+|++-++..
T Consensus 183 SI~~Ai~eA~~l~~~~ 198 (225)
T 2pju_A 183 TVRQAFSDALDMTRMS 198 (225)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999877653
No 129
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=24.94 E-value=71 Score=31.50 Aligned_cols=40 Identities=18% Similarity=0.152 Sum_probs=25.7
Q ss_pred CcEEEEEeCCCCcccch--------HHHHHHHHHhCCCCEEEEEEcCC
Q 019523 129 DHVTLAFFGDGTCNNGQ--------FFECLNMAALWKLPIVFVVENNL 168 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~--------~~eal~~A~~~~Lpvi~vv~NN~ 168 (339)
++.|+++.-|..+..|. +.-++.+|.+.++|+|++++.-+
T Consensus 96 Gr~v~v~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~dSgG 143 (530)
T 3iav_A 96 GRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTGCPVVGINDSGG 143 (530)
T ss_dssp TEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCS
T ss_pred CEEEEEEEECCCcceEeccHHHHHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 45667777776665553 34455677777777777776655
No 130
>3qyh_A CO-type nitrIle hydratase alpha subunit; cobalt, cysteine sulfinic acid, lyase; 2.00A {Pseudomonas putida} PDB: 3qyg_A 3qxe_A 3qz9_A 3qz5_A
Probab=24.93 E-value=92 Score=26.90 Aligned_cols=29 Identities=24% Similarity=0.405 Sum_probs=24.1
Q ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHH
Q 019523 259 ITALKKYLIESSLASEAELKAIEKKIDEV 287 (339)
Q Consensus 259 l~~~~~~L~~~g~~~~~~~~~i~~~~~~~ 287 (339)
+..++..|+++|+++.++++++.+.+..+
T Consensus 40 ~~Al~~lL~eKG~i~~~~~~~~~~~~e~~ 68 (226)
T 3qyh_A 40 VKALESLLIEKGLVDPAAMDLVVQTYEHK 68 (226)
T ss_dssp HHHHHHHHHHHTSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHhc
Confidence 35688999999999999999988766554
No 131
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=24.41 E-value=83 Score=26.38 Aligned_cols=83 Identities=13% Similarity=0.060 Sum_probs=53.1
Q ss_pred EEEEeCCCCcccchHHHHHHHHHhCCCCEEEEEEcCCeeecccccc--------cccChhhhhhcccCCCcEEEecCCCH
Q 019523 132 TLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLR--------ATSDPQIYKKGPAFGMPGFHVDGMDV 203 (339)
Q Consensus 132 vv~~~GDG~~~~g~~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~~--------~~~~~d~~~~a~a~G~~~~~Vdg~d~ 203 (339)
-|+++|=+....+ . -.++...++++.+...+|...+...... -....-..+.|+-+|++++.+.. ..
T Consensus 96 kIavvg~~~~~~~--~--~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~~~~~A~~~Gl~~vli~s-g~ 170 (196)
T 2q5c_A 96 ELALIAYKHSIVD--K--HEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKTVTDEAIKQGLYGETINS-GE 170 (196)
T ss_dssp EEEEEEESSCSSC--H--HHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHHHHHHHHHTTCEEEECCC-CH
T ss_pred cEEEEeCcchhhH--H--HHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHHHHHHHHHcCCcEEEEec-CH
Confidence 4566666666666 3 3456677888777777765332111110 01233456788899999999975 34
Q ss_pred HHHHHHHHHHHHHHHc
Q 019523 204 LKVREVAKEAIERARR 219 (339)
Q Consensus 204 ~~v~~a~~~A~~~ar~ 219 (339)
+++..|+.+|++-++.
T Consensus 171 eSI~~Ai~eA~~l~~~ 186 (196)
T 2q5c_A 171 ESLRRAIEEALNLIEV 186 (196)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6888888888887764
No 132
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=23.85 E-value=87 Score=28.14 Aligned_cols=40 Identities=10% Similarity=0.080 Sum_probs=25.2
Q ss_pred CcEEEEEeCCCCcccch--------HHHHHHHHHhCCCCEEEEEEcCC
Q 019523 129 DHVTLAFFGDGTCNNGQ--------FFECLNMAALWKLPIVFVVENNL 168 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~--------~~eal~~A~~~~Lpvi~vv~NN~ 168 (339)
++.|+++.=|-.+..|. +...+.+|.+.++|+|++++.-+
T Consensus 120 G~~V~v~a~d~~~~gGs~g~~~~~K~~r~ie~A~~~~lPlI~l~dsgG 167 (285)
T 2f9i_B 120 GMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGG 167 (285)
T ss_dssp TEEEEEEEECTTTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred CEEEEEEEEccccccCcCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCC
Confidence 45666666674433222 24466777788888888877666
No 133
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=23.63 E-value=2e+02 Score=22.28 Aligned_cols=63 Identities=13% Similarity=0.086 Sum_probs=35.7
Q ss_pred hCCCCEEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCCCHHHHHHHHHHHHHHHHcCC
Q 019523 155 LWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGE 221 (339)
Q Consensus 155 ~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~~v~~a~~~A~~~ar~~~ 221 (339)
..+.|+++|.. . +.....+.........+++.+|++.+.+...+-..+.+.+...++.+...+
T Consensus 109 ~~~~p~ilv~n--K--~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~v~~l~~~l~~~~~~~~ 171 (181)
T 3t5g_A 109 KVQIPIMLVGN--K--KDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKMD 171 (181)
T ss_dssp ---CCEEEEEE--C--TTCTTTCCSCHHHHHHHHHHTTCEEEECCTTSHHHHHHHHHHHHHHHHTC-
T ss_pred CCCCCEEEEEE--C--ccchhcceecHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHHHHhc
Confidence 34678765543 2 122222222334556677888999999987776666666666666665544
No 134
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=22.79 E-value=2.8e+02 Score=25.01 Aligned_cols=19 Identities=11% Similarity=0.221 Sum_probs=13.4
Q ss_pred HHHH-HHhCCCCEEEEEEcC
Q 019523 149 CLNM-AALWKLPIVFVVENN 167 (339)
Q Consensus 149 al~~-A~~~~Lpvi~vv~NN 167 (339)
++.. |...++++++|+-.+
T Consensus 92 alA~aa~~~G~~~~iv~p~~ 111 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIAMPST 111 (343)
T ss_dssp HHHHHHHHHTCCEEEEEETT
T ss_pred HHHHHHHHcCCCEEEEECCC
Confidence 4444 457899988887765
No 135
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=22.79 E-value=1.4e+02 Score=19.06 Aligned_cols=12 Identities=33% Similarity=0.537 Sum_probs=4.6
Q ss_pred HHHHHHHHHHHH
Q 019523 276 ELKAIEKKIDEV 287 (339)
Q Consensus 276 ~~~~i~~~~~~~ 287 (339)
|++++++++.+.
T Consensus 23 ElqK~K~EIIeA 34 (45)
T 1use_A 23 ELQKVKEEIIEA 34 (45)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 136
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=22.72 E-value=54 Score=23.82 Aligned_cols=25 Identities=8% Similarity=0.190 Sum_probs=21.8
Q ss_pred HHHHHHHHHHcCcccHHHHHHHHHH
Q 019523 259 ITALKKYLIESSLASEAELKAIEKK 283 (339)
Q Consensus 259 l~~~~~~L~~~g~~~~~~~~~i~~~ 283 (339)
+..+...|.+.|++|+++.+.|+.+
T Consensus 24 v~~lld~L~~~~vlt~~~~e~I~~~ 48 (94)
T 2p1h_A 24 TSYIMDHMISDGFLTISEEEKVRNE 48 (94)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHTS
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHcC
Confidence 5667788999999999999999875
No 137
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=22.52 E-value=1e+02 Score=30.37 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=33.4
Q ss_pred CCcEEEEEeCCCCcccc--------hHHHHHHHHHhCCCCEEEEEEcCCeee
Q 019523 128 CDHVTLAFFGDGTCNNG--------QFFECLNMAALWKLPIVFVVENNLWAI 171 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g--------~~~eal~~A~~~~Lpvi~vv~NN~~~i 171 (339)
.++.|+++.-|..+..| -+..++.+|.+.++|+|+++++-+..+
T Consensus 96 ~Gr~v~v~a~D~t~~gGS~g~~~~~Ki~r~~e~A~~~~lPvI~l~dSgGAR~ 147 (527)
T 1vrg_A 96 NGRKVAVFSQDFTVMGGSLGEMHAKKIVKLLDLALKMGIPVIGINDSGGARI 147 (527)
T ss_dssp TTEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCG
T ss_pred CCEEEEEEEEeccccCccccHHHHHHHHHHHHHHHHcCCCEEEEECCCCCCc
Confidence 36788888889776655 345568888999999999999877444
No 138
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=22.11 E-value=94 Score=30.62 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=27.3
Q ss_pred CcEEEEEeCCCCcccc--------hHHHHHHHHHhCCCCEEEEEEcCC
Q 019523 129 DHVTLAFFGDGTCNNG--------QFFECLNMAALWKLPIVFVVENNL 168 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g--------~~~eal~~A~~~~Lpvi~vv~NN~ 168 (339)
++.|+++.-|..+..| -+..++.+|.+.++|+|+++..-+
T Consensus 104 Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~lPvI~l~dSGG 151 (531)
T 3n6r_B 104 GRVVYVFSQDFTVLGGSVSETHSKKICKIMDMAMQNGAPVIGINDSGG 151 (531)
T ss_dssp TEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCC
T ss_pred CEEEEEEEECCCcccccccHHHHHHHHHHHHHHHHcCCCEEEEeCCCc
Confidence 4567777777776655 234566677778888877777665
No 139
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=21.94 E-value=1.5e+02 Score=26.84 Aligned_cols=41 Identities=12% Similarity=0.096 Sum_probs=23.5
Q ss_pred HHHH-HHhCCCCEEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecCC
Q 019523 149 CLNM-AALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGM 201 (339)
Q Consensus 149 al~~-A~~~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~ 201 (339)
++.. |...++|+++|+-.+- + ..-....++||..++.+++.
T Consensus 86 alA~aa~~~G~~~~iv~p~~~-----~-------~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 86 SLAHLGAIRGYKVIITMPESM-----S-------LERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHHHHHHHTCEEEEEEETTS-----C-------HHHHHHHHHTTCEEEEECGG
T ss_pred HHHHHHHHhCCCEEEEECCCC-----C-------HHHHHHHHHCCCEEEEECCC
Confidence 4444 4577999887775542 0 11223445677777777654
No 140
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=21.81 E-value=1e+02 Score=20.54 Aligned_cols=24 Identities=13% Similarity=0.347 Sum_probs=18.8
Q ss_pred ChHHHHHHHHHHcCcccHHHHHHHH
Q 019523 257 DPITALKKYLIESSLASEAELKAIE 281 (339)
Q Consensus 257 dPl~~~~~~L~~~g~~~~~~~~~i~ 281 (339)
-|+..=..+|...| +|++||++.-
T Consensus 28 sp~~~K~~FL~sKG-Lt~~EI~~Al 51 (54)
T 3ff5_A 28 SPLATRRAFLKKKG-LTDEEIDLAF 51 (54)
T ss_dssp SCHHHHHHHHHHTT-CCHHHHHHHH
T ss_pred CCHHHHHHHHHHcC-CCHHHHHHHH
Confidence 57888888888888 6888887654
No 141
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=21.18 E-value=99 Score=24.06 Aligned_cols=51 Identities=16% Similarity=0.097 Sum_probs=33.6
Q ss_pred EEEEe-CCCCcccchHHHHHHHHHh-CCCCEEEEEEcCCeeecccccccccChhhhhhcccCCCcEEEecC
Q 019523 132 TLAFF-GDGTCNNGQFFECLNMAAL-WKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 200 (339)
Q Consensus 132 vv~~~-GDG~~~~g~~~eal~~A~~-~~Lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 200 (339)
.+.++ ||-. +..-.|.. .++|.|+++.+.. ..+++.++|+..|+|.++++.
T Consensus 54 ~l~I~~G~r~-------~~~l~a~~~~~~~~iIlt~g~~-----------~~~~i~~~A~~~~ipvl~t~~ 106 (139)
T 2ioj_A 54 AALVTGGDRS-------DLLLTALEMPNVRCLILTGNLE-----------PVQLVLTKAEERGVPVILTGH 106 (139)
T ss_dssp EEEEEETTCH-------HHHHHHTTCTTEEEEEEETTCC-----------CCHHHHHHHHHHTCCEEECSS
T ss_pred EEEEEcCCHH-------HHHHHHHhCCCCcEEEEcCCCC-----------CCHHHHHHHHHCCCeEEEECC
Confidence 45555 9973 22223443 5777776655443 456778889899999999874
No 142
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=20.84 E-value=99 Score=30.87 Aligned_cols=73 Identities=12% Similarity=0.153 Sum_probs=45.1
Q ss_pred CcEEEEEeCCCCcccch--------HHHHHHHHHhCCCCEEEEEEcCCeeecccccc-----cccChhh--hhhcccCCC
Q 019523 129 DHVTLAFFGDGTCNNGQ--------FFECLNMAALWKLPIVFVVENNLWAIGMSHLR-----ATSDPQI--YKKGPAFGM 193 (339)
Q Consensus 129 ~~~vv~~~GDG~~~~g~--------~~eal~~A~~~~Lpvi~vv~NN~~~i~~~~~~-----~~~~~d~--~~~a~a~G~ 193 (339)
++.|+++.-|..++.|. +.-++.+|...++|+|.+++.-+..+...... +. ..-+ .....+.|+
T Consensus 104 Gr~v~v~a~D~t~~gGs~g~~~~~Ki~r~~e~A~~~~lPvI~l~dSgGArlqe~~~~l~~~~~~-g~i~~~~~~ls~~gi 182 (587)
T 1pix_A 104 GKWCVVVASDNKKLAGAWVPGQAECLLRASDTAKTLHVPLVYVLNCSGVKFDEQEKVYPNRRGG-GTPFFRNAELNQLGI 182 (587)
T ss_dssp TEEEEEEEECTTTTTTEECTTHHHHHHHHHHHHHHHTCCEEEEECCCEECGGGHHHHSSSTTST-THHHHHHHHHHHTTC
T ss_pred CEEEEEEEECCccccCCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCccccchhccccccH-HHHHHHHHHHhCCCC
Confidence 56888888886655443 45678899999999999988776444221110 11 1111 123456788
Q ss_pred cEEEe-cCCC
Q 019523 194 PGFHV-DGMD 202 (339)
Q Consensus 194 ~~~~V-dg~d 202 (339)
|.+.| -|..
T Consensus 183 P~Isvv~G~~ 192 (587)
T 1pix_A 183 PVIVGIYGTN 192 (587)
T ss_dssp CEEEEECSEE
T ss_pred CEEEEEecCC
Confidence 88854 5553
No 143
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=20.23 E-value=1.1e+02 Score=31.53 Aligned_cols=45 Identities=20% Similarity=0.209 Sum_probs=35.1
Q ss_pred CCcEEEEEeCCCCcccch--------HHHHHHHHHhCCCCEEEEEEcCCeeec
Q 019523 128 CDHVTLAFFGDGTCNNGQ--------FFECLNMAALWKLPIVFVVENNLWAIG 172 (339)
Q Consensus 128 ~~~~vv~~~GDG~~~~g~--------~~eal~~A~~~~Lpvi~vv~NN~~~i~ 172 (339)
.++.|+++.-|-.++.|. +.-++.+|.+.++|+|+++.+.+..+.
T Consensus 103 ~G~~vvV~a~D~t~~gGS~G~~~~eKi~Ra~e~A~~~~lPvI~l~dSGGARmq 155 (758)
T 3k8x_A 103 RGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIG 155 (758)
T ss_dssp TCEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCCC
T ss_pred CCeEEEEEEECCccccccCcHHHHHHHHHHHHHHHHcCCCEEEEecCCCcCcc
Confidence 357888999998877663 345677899999999999998875553
Done!