Query 019524
Match_columns 339
No_of_seqs 204 out of 1443
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 03:09:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019524.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019524hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zz1_A Histone deacetylase-lik 100.0 5E-87 1.7E-91 652.0 29.9 296 33-337 1-327 (369)
2 4a69_A Histone deacetylase 3,; 100.0 2.6E-85 8.8E-90 639.6 29.7 299 32-338 2-314 (376)
3 3max_A HD2, histone deacetylas 100.0 7.4E-85 2.5E-89 633.6 29.8 299 32-338 2-313 (367)
4 2pqp_A HD7A, histone deacetyla 100.0 4.1E-84 1.4E-88 635.2 30.5 326 6-335 8-374 (421)
5 1c3p_A Protein (HDLP (histone 100.0 2.7E-84 9.2E-89 633.9 28.3 299 33-338 2-313 (375)
6 3ew8_A HD8, histone deacetylas 100.0 4.9E-83 1.7E-87 623.7 26.4 300 29-338 10-322 (388)
7 2vqm_A HD4, histone deacetylas 100.0 1.2E-81 4.1E-86 622.4 27.5 306 29-338 4-348 (413)
8 3q9b_A Acetylpolyamine amidohy 100.0 3.4E-81 1.2E-85 602.7 26.0 289 35-334 1-334 (341)
9 3men_A Acetylpolyamine aminohy 100.0 4.2E-81 1.4E-85 605.3 26.3 292 29-334 17-352 (362)
10 1ivn_A Thioesterase I; hydrola 87.5 3.2 0.00011 34.4 9.4 49 262-317 56-105 (190)
11 3hp4_A GDSL-esterase; psychrot 86.6 1.5 5.2E-05 36.1 6.7 60 247-317 49-109 (185)
12 3mil_A Isoamyl acetate-hydroly 83.7 4.7 0.00016 34.3 8.8 65 248-318 55-120 (240)
13 3p94_A GDSL-like lipase; serin 81.5 2.4 8.1E-05 35.4 5.8 51 264-318 70-121 (204)
14 4h08_A Putative hydrolase; GDS 81.2 4.9 0.00017 33.6 7.8 57 243-311 53-109 (200)
15 3bzw_A Putative lipase; protei 79.7 2.1 7.2E-05 38.3 5.2 36 252-289 74-110 (274)
16 2q0q_A ARYL esterase; SGNH hyd 79.5 4.2 0.00014 34.2 6.7 51 263-318 77-138 (216)
17 3rjt_A Lipolytic protein G-D-S 78.0 1.8 6E-05 36.3 3.9 54 264-317 79-136 (216)
18 4hf7_A Putative acylhydrolase; 74.2 5.7 0.00019 33.8 6.1 70 239-317 54-124 (209)
19 1es9_A PAF-AH, platelet-activa 74.0 4.7 0.00016 34.7 5.6 45 264-317 89-136 (232)
20 1vjg_A Putative lipase from th 73.1 3.6 0.00012 35.0 4.6 66 249-318 69-136 (218)
21 1yzf_A Lipase/acylhydrolase; s 72.9 15 0.0005 29.9 8.2 61 247-318 50-111 (195)
22 2o14_A Hypothetical protein YX 71.7 7.7 0.00026 36.8 7.0 53 260-317 221-275 (375)
23 3dci_A Arylesterase; SGNH_hydr 71.3 12 0.0004 32.2 7.6 44 263-310 95-139 (232)
24 1fxw_F Alpha2, platelet-activa 67.6 7.2 0.00025 33.5 5.4 45 264-317 90-137 (229)
25 4dzz_A Plasmid partitioning pr 61.6 26 0.00088 29.0 7.6 11 188-199 29-39 (206)
26 3dff_A Teicoplanin pseudoaglyc 59.6 9.7 0.00033 34.7 4.8 54 250-315 130-183 (273)
27 3dc7_A Putative uncharacterize 58.4 6.2 0.00021 33.8 3.1 52 267-318 81-136 (232)
28 3dfi_A Pseudoaglycone deacetyl 58.1 11 0.00038 34.1 4.9 54 250-315 127-180 (270)
29 2q6t_A DNAB replication FORK h 57.5 19 0.00066 34.7 6.9 51 259-318 301-360 (444)
30 3bgw_A DNAB-like replicative h 54.5 27 0.00092 33.9 7.3 51 259-318 299-357 (444)
31 4a1f_A DNAB helicase, replicat 54.4 7.7 0.00026 36.6 3.3 55 255-318 142-203 (338)
32 3bh0_A DNAB-like replicative h 54.1 17 0.00058 33.4 5.6 52 258-318 169-228 (315)
33 3skv_A SSFX3; jelly roll, GDSL 54.0 13 0.00045 35.6 4.9 50 262-318 238-290 (385)
34 1k7c_A Rhamnogalacturonan acet 53.5 18 0.00062 31.3 5.4 57 261-317 55-131 (233)
35 2hsj_A Putative platelet activ 52.4 8.5 0.00029 32.2 3.0 46 265-317 82-130 (214)
36 1cp2_A CP2, nitrogenase iron p 51.3 14 0.00047 32.5 4.3 24 187-212 27-50 (269)
37 1q57_A DNA primase/helicase; d 50.9 26 0.00089 34.3 6.6 55 260-317 346-400 (503)
38 1g3q_A MIND ATPase, cell divis 48.9 14 0.00049 31.6 3.9 19 187-206 29-47 (237)
39 2q8u_A Exonuclease, putative; 48.0 60 0.0021 29.6 8.3 62 250-322 44-106 (336)
40 1hyq_A MIND, cell division inh 47.7 15 0.00052 32.1 4.0 19 187-206 29-47 (263)
41 3pg5_A Uncharacterized protein 47.4 15 0.00051 34.5 4.0 23 187-211 28-50 (361)
42 3q9l_A Septum site-determining 47.2 16 0.00054 31.7 4.0 20 187-207 29-48 (260)
43 2afh_E Nitrogenase iron protei 47.1 18 0.00063 32.2 4.5 23 187-211 28-50 (289)
44 3ea0_A ATPase, para family; al 47.0 19 0.00066 30.8 4.5 19 191-209 35-53 (245)
45 3jug_A Beta-mannanase; TIM-bar 46.9 54 0.0019 30.7 7.9 67 251-324 117-186 (345)
46 1ii7_A MRE11 nuclease; RAD50, 46.5 88 0.003 28.5 9.2 61 250-319 23-83 (333)
47 2r6a_A DNAB helicase, replicat 44.5 41 0.0014 32.4 6.9 53 258-319 303-362 (454)
48 4ep4_A Crossover junction endo 44.3 1E+02 0.0035 25.9 8.4 66 244-317 39-105 (166)
49 3kjh_A CO dehydrogenase/acetyl 43.8 15 0.00052 31.4 3.3 20 185-206 24-43 (254)
50 1wcv_1 SOJ, segregation protei 41.7 19 0.00066 31.6 3.7 15 191-206 36-50 (257)
51 2vpt_A Lipolytic enzyme; ester 41.4 35 0.0012 28.6 5.2 47 249-304 68-115 (215)
52 2ej5_A Enoyl-COA hydratase sub 41.3 1.3E+02 0.0045 26.4 9.3 70 247-320 26-103 (257)
53 2buf_A Acetylglutamate kinase; 41.2 1E+02 0.0035 28.0 8.7 62 250-322 8-69 (300)
54 2wao_A Endoglucanase E; plant 40.4 28 0.00096 32.1 4.8 48 265-318 210-260 (341)
55 1vhx_A Putative holliday junct 40.0 26 0.00088 29.0 3.9 56 258-322 45-101 (150)
56 2waa_A Acetyl esterase, xylan 39.9 20 0.00069 33.3 3.7 47 265-317 222-271 (347)
57 3tho_B Exonuclease, putative; 39.9 91 0.0031 29.2 8.3 64 249-322 25-88 (379)
58 3l3s_A Enoyl-COA hydratase/iso 38.9 1.9E+02 0.0064 25.6 9.9 75 246-320 28-113 (263)
59 3av0_A DNA double-strand break 38.9 91 0.0031 29.2 8.2 61 250-319 43-103 (386)
60 2xj4_A MIPZ; replication, cell 38.8 23 0.00078 31.8 3.7 20 187-207 31-50 (286)
61 3gaa_A Uncharacterized protein 38.4 36 0.0012 30.5 5.0 26 175-200 38-63 (252)
62 4fzw_C 1,2-epoxyphenylacetyl-C 38.1 1.2E+02 0.0042 27.1 8.6 74 247-320 38-120 (274)
63 3end_A Light-independent proto 37.7 27 0.00093 31.4 4.1 21 187-209 67-87 (307)
64 3la6_A Tyrosine-protein kinase 35.5 27 0.00092 31.7 3.7 14 191-204 122-135 (286)
65 3d2m_A Putative acetylglutamat 34.5 48 0.0016 31.9 5.5 61 250-322 25-85 (456)
66 2w0m_A SSO2452; RECA, SSPF, un 34.3 47 0.0016 27.7 4.9 50 261-318 114-165 (235)
67 3aek_B Light-independent proto 34.1 61 0.0021 32.2 6.3 55 255-324 72-127 (525)
68 2dr3_A UPF0273 protein PH0284; 33.9 62 0.0021 27.4 5.6 53 258-318 118-170 (247)
69 3t1i_A Double-strand break rep 33.8 1.1E+02 0.0039 29.5 8.1 50 250-307 54-103 (431)
70 2oze_A ORF delta'; para, walke 33.5 30 0.001 30.9 3.6 20 187-208 63-82 (298)
71 3bfv_A CAPA1, CAPB2, membrane 33.1 35 0.0012 30.6 4.0 14 191-204 112-125 (271)
72 2cvh_A DNA repair and recombin 32.8 66 0.0023 26.7 5.6 51 262-318 100-153 (220)
73 3cio_A ETK, tyrosine-protein k 32.6 34 0.0012 31.1 3.9 16 191-206 134-149 (299)
74 3hrx_A Probable enoyl-COA hydr 32.5 2E+02 0.0068 25.1 9.0 72 246-320 22-100 (254)
75 2bty_A Acetylglutamate kinase; 32.3 81 0.0028 28.2 6.4 62 251-323 4-65 (282)
76 2whl_A Beta-mannanase, baman5; 32.1 1.4E+02 0.0047 26.5 7.9 67 251-324 94-163 (294)
77 3fkq_A NTRC-like two-domain pr 31.4 32 0.0011 32.2 3.6 19 191-211 173-191 (373)
78 2ph1_A Nucleotide-binding prot 31.2 35 0.0012 29.9 3.6 17 188-205 46-62 (262)
79 2xdq_A Light-independent proto 30.9 61 0.0021 31.3 5.6 55 256-323 85-140 (460)
80 3fwy_A Light-independent proto 30.8 38 0.0013 31.2 3.9 22 184-207 71-92 (314)
81 3he2_A Enoyl-COA hydratase ECH 30.7 1.1E+02 0.0037 27.4 6.9 74 239-320 36-116 (264)
82 2f6q_A Peroxisomal 3,2-trans-e 30.6 1.9E+02 0.0064 25.9 8.6 79 238-320 40-130 (280)
83 3ib7_A ICC protein; metallopho 29.9 1.2E+02 0.0041 26.9 7.1 62 253-324 50-112 (330)
84 3hp4_A GDSL-esterase; psychrot 29.7 1.3E+02 0.0045 23.9 6.8 65 242-309 112-180 (185)
85 3r6h_A Enoyl-COA hydratase, EC 29.2 1.4E+02 0.0047 25.9 7.2 72 246-320 26-104 (233)
86 3pea_A Enoyl-COA hydratase/iso 28.9 2.1E+02 0.007 25.3 8.4 74 246-320 27-107 (261)
87 1qv9_A F420-dependent methylen 28.7 59 0.002 29.4 4.5 47 258-320 54-100 (283)
88 2qsw_A Methionine import ATP-b 28.3 7.2 0.00025 29.8 -1.4 56 259-314 39-94 (100)
89 2ppy_A Enoyl-COA hydratase; be 28.1 1.1E+02 0.0037 27.1 6.4 79 238-320 23-110 (265)
90 2ap9_A NAG kinase, acetylgluta 28.0 1.4E+02 0.005 26.9 7.4 66 247-323 4-69 (299)
91 3gow_A PAAG, probable enoyl-CO 28.0 2.6E+02 0.009 24.4 8.9 71 247-320 23-100 (254)
92 3k9g_A PF-32 protein; ssgcid, 27.6 38 0.0013 29.6 3.2 18 191-209 56-73 (267)
93 3zq6_A Putative arsenical pump 27.6 46 0.0016 30.5 3.9 20 191-212 43-62 (324)
94 2j5g_A ALR4455 protein; enzyme 27.6 1.5E+02 0.0052 26.3 7.3 68 249-320 49-126 (263)
95 2gwf_A Ubiquitin carboxyl-term 27.4 35 0.0012 27.8 2.7 12 315-326 133-144 (157)
96 3sll_A Probable enoyl-COA hydr 26.9 3.4E+02 0.012 24.2 10.1 75 246-320 46-132 (290)
97 1cr0_A DNA primase/helicase; R 26.7 91 0.0031 27.6 5.6 48 262-317 141-193 (296)
98 3hsy_A Glutamate receptor 2; l 26.6 1.1E+02 0.0037 28.0 6.3 34 178-212 109-142 (376)
99 3ez2_A Plasmid partition prote 26.6 41 0.0014 31.6 3.4 13 191-204 144-156 (398)
100 3ug7_A Arsenical pump-driving 26.3 86 0.0029 29.1 5.5 23 188-213 53-75 (349)
101 2rd5_A Acetylglutamate kinase- 26.3 74 0.0025 28.9 5.0 62 250-322 18-79 (298)
102 2xdq_B Light-independent proto 25.8 58 0.002 32.1 4.4 55 257-324 77-132 (511)
103 3ced_A Methionine import ATP-b 25.7 12 0.0004 28.7 -0.6 57 257-314 34-92 (98)
104 2qrr_A Methionine import ATP-b 25.2 8.5 0.00029 29.4 -1.4 56 259-314 39-94 (101)
105 2q02_A Putative cytoplasmic pr 25.0 2.2E+02 0.0074 24.3 7.8 57 249-315 80-137 (272)
106 3pdi_B Nitrogenase MOFE cofact 24.3 89 0.003 30.4 5.4 57 254-324 78-140 (458)
107 2vx2_A Enoyl-COA hydratase dom 24.2 1.9E+02 0.0065 26.0 7.3 71 246-320 55-135 (287)
108 1nzy_A Dehalogenase, 4-chlorob 24.1 2.5E+02 0.0085 24.8 8.0 69 249-320 28-109 (269)
109 3rcm_A TATD family hydrolase; 23.9 1.2E+02 0.0042 27.4 6.0 41 174-215 16-56 (287)
110 3pzg_A Mannan endo-1,4-beta-ma 23.8 1.4E+02 0.0048 28.3 6.6 71 248-323 147-229 (383)
111 2jjx_A Uridylate kinase, UMP k 23.7 1.5E+02 0.0052 26.0 6.5 53 268-323 11-63 (255)
112 3ez9_A Para; DNA binding, wing 23.5 48 0.0016 31.2 3.2 15 191-206 147-161 (403)
113 3dhx_A Methionine import ATP-b 23.3 14 0.00048 28.6 -0.5 55 259-313 37-91 (106)
114 1wky_A Endo-beta-1,4-mannanase 23.0 2.3E+02 0.0078 27.3 8.1 67 251-324 102-171 (464)
115 2ixd_A LMBE-related protein; h 22.3 77 0.0026 28.0 4.2 23 257-279 86-108 (242)
116 3njd_A Enoyl-COA hydratase; ss 22.0 3.7E+02 0.013 24.6 9.0 74 201-274 6-85 (333)
117 1mio_B Nitrogenase molybdenum 21.9 1.5E+02 0.0051 28.6 6.5 24 254-277 82-105 (458)
118 1uan_A Hypothetical protein TT 21.8 62 0.0021 28.2 3.4 24 257-280 84-107 (227)
119 1xp8_A RECA protein, recombina 21.8 1.7E+02 0.0057 27.5 6.6 58 260-317 144-207 (366)
120 2woo_A ATPase GET3; tail-ancho 21.5 62 0.0021 29.7 3.5 22 187-211 45-66 (329)
121 2woj_A ATPase GET3; tail-ancho 21.3 63 0.0022 30.2 3.5 23 187-212 46-68 (354)
122 3oc7_A Enoyl-COA hydratase; se 21.1 3.5E+02 0.012 23.7 8.4 86 213-320 18-117 (267)
123 3cwq_A Para family chromosome 20.7 60 0.0021 27.5 3.0 21 184-207 24-44 (209)
124 3lke_A Enoyl-COA hydratase; ny 20.5 97 0.0033 27.5 4.5 29 246-274 26-54 (263)
125 1n0w_A DNA repair protein RAD5 20.4 1.5E+02 0.0052 24.8 5.6 65 250-318 102-171 (243)
126 3tva_A Xylose isomerase domain 20.3 3E+02 0.01 23.7 7.8 62 249-322 97-161 (290)
127 2w9x_A AXE2A, CJCE2B, putative 20.1 65 0.0022 30.0 3.3 54 265-318 233-293 (366)
No 1
>1zz1_A Histone deacetylase-like amidohydrolase; HET: SHH; 1.57A {Alcaligenaceae bacterium} PDB: 1zz0_A* 1zz3_A* 2gh6_A* 2vcg_A*
Probab=100.00 E-value=5e-87 Score=651.95 Aligned_cols=296 Identities=21% Similarity=0.310 Sum_probs=271.8
Q ss_pred CcceEEECcccCcccCCCCCC----------------CCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCCh
Q 019524 33 FKLPLIYSPDYDISFLGIEKL----------------HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSE 96 (339)
Q Consensus 33 ~~~~ivy~~~~~~h~~~~~~~----------------HPe~p~R~~~i~~~L~~~gl~~~~~~~~p~~a~~e~l~~vHs~ 96 (339)
|+++++|||+|..|.++ .+ |||+|+|++.|+++|++.|+++.+++++|++++.++|++||++
T Consensus 1 m~t~~~y~~~~~~h~~~--~~~~~~~~~g~~~~~~~~Hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~a~~~~l~~vH~~ 78 (369)
T 1zz1_A 1 MAIGYVWNTLYGWVDTG--TGSLAAANLTARMQPISHHLAHPDTKRRFHELVCASGQIEHLTPIAAVAATDADILRAHSA 78 (369)
T ss_dssp -CEEEECCGGGGGCCCC--SSSSSCCBTTTTBCCCSSCTTCTHHHHHHHHHHHHTTGGGGSEECCCCCCCHHHHHTTSCH
T ss_pred CeEEEEEchHHcccCCC--CcccccccccccccccCCCCCCHHHHHHHHHHHHhcCCCccceEeCCCcCCHHHHHHhccH
Confidence 68999999999999765 44 9999999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCC-ccccccCCCccccC-CccccccchHHHHHHhcHHHHHHHHhhh----hcceeeccCCCCCCCCCCCCc
Q 019524 97 SYLKSLQSSPN-VSIIIEVPPVALFP-NCLVQRKVLYPFRKQVGGTILAAKLAKE----RGWAINVGGGFHHCSADEGGG 170 (339)
Q Consensus 97 ~Yv~~l~~~~~-~~~~~e~~~~~~~~-~~~~~~~~~~~a~~aagg~l~aa~~~~~----~~~a~~~~~G~HHA~~~~a~G 170 (339)
+||++|++.+. .. ...++. ||++++++++++++++||++.|++.+++ ++||++|||| |||++++++|
T Consensus 79 ~Yv~~l~~~~~~~~------~~~l~~~dtp~~~~~~~~a~~aaG~~l~aa~~v~~g~~~~afa~~rppG-HHA~~~~a~G 151 (369)
T 1zz1_A 79 AHLENMKRVSNLPT------GGDTGDGITMMGNGGLEIARLSAGGAVELTRRVATGELSAGYALVNPPG-HHAPHNAAMG 151 (369)
T ss_dssp HHHHHHHHHHHSTT------CEECSSSSCEECTTTHHHHHHHHHHHHHHHHHHHTTSCSEEEECCSSCC-TTCCTTCCBT
T ss_pred HHHHHHHHhCcccc------ceecCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhCCCcceEEEecCCc-cCcCCCCCCC
Confidence 99999987653 11 123566 9999999999999999999999999987 4689999998 9999999999
Q ss_pred ccccchHHHHHHHHHHHcCCCeEEEEeccCcCCcchhhhhcCCCcEEEEEeeCCCCCC-CCccc-------CCccccccc
Q 019524 171 FCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYP-RDYEA-------RRFIDQKVE 242 (339)
Q Consensus 171 FC~fNnvAIAa~~l~~~~~~~RV~IiD~DvHHGnGTq~if~~d~~Vl~iSiH~~~~yP-~tg~~-------~~~~~~NvP 242 (339)
||+|||+||||++|++++|++||+|||||||||||||+|||+||+|+|+|+|+.++|| +||.. ++++++|||
T Consensus 152 FC~fNnvAiAa~~l~~~~g~~RV~IvD~DvHHGnGTq~iF~~d~~Vl~~SiH~~~~yP~~tG~~~e~G~g~g~g~~vNvP 231 (369)
T 1zz1_A 152 FCIFNNTSVAAGYARAVLGMERVAILDWDVHHGNGTQDIWWNDPSVLTISLHQHLCFPPDSGYSTERGAGNGHGYNINVP 231 (369)
T ss_dssp TBSSCHHHHHHHHHHHTSCCSCEEEEECSSSCCHHHHHHTTTCTTEEEEEEEETTSSSTTCCCTTCCCCGGGTTCEEEEE
T ss_pred chHhhHHHHHHHHHHHhcCCCeEEEEecCCCCchhhhHHhcCCCCEEEEeccCCCCCCCCCCcccccCCCCCCceEEeee
Confidence 9999999999999999999999999999999999999999999999999999999999 88753 246899999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhh-CCCCEEEEeCCC
Q 019524 243 VVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARS-RNIPIVMLTSGP 321 (339)
Q Consensus 243 L~~g~~d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~-~~~p~v~vleGG 321 (339)
||+|++|++|+.+|++++.|++++|+||+||||||||+|++||||.|+||+++|.++++.|+++|.+ +++|++++||||
T Consensus 232 L~~g~~d~~yl~~~~~~v~p~l~~f~PdlIvvsaG~Da~~~DpLg~l~lt~~g~~~~~~~l~~~a~~~~~g~vv~vleGG 311 (369)
T 1zz1_A 232 LPPGSGNAAYLHAMDQVVLPALRAYRPQLIIVGSGFDASMLDPLARMMVTADGFRQMARRTIDCAADICDGRIVFVQEGG 311 (369)
T ss_dssp ECTTCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCTTCCCBBCHHHHHHHHHHHHHHHHHHSTTCEEEEECCC
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccCCCCCCCCCcccCHHHHHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999988 799999999999
Q ss_pred CChhHHHHHHHHHhhh
Q 019524 322 ITSEKVLALWSIRFHV 337 (339)
Q Consensus 322 Y~~~~~~a~~~~~~~~ 337 (339)
|+...+..+|+..+..
T Consensus 312 Y~~~~l~~~~~~~~~~ 327 (369)
T 1zz1_A 312 YSPHYLPFCGLAVIEE 327 (369)
T ss_dssp CCTTTHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHH
Confidence 9986566666655443
No 2
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.6e-85 Score=639.64 Aligned_cols=299 Identities=24% Similarity=0.404 Sum_probs=269.5
Q ss_pred CCcceEEECcccCcccCCCCCCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCChhHHHHhhcCCCcccc
Q 019524 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII 111 (339)
Q Consensus 32 ~~~~~ivy~~~~~~h~~~~~~~HPe~p~R~~~i~~~L~~~gl~~~~~~~~p~~a~~e~l~~vHs~~Yv~~l~~~~~~~~~ 111 (339)
++++.++|||+|..|.++ ++|||+|+|++.|+++|++.|+++.+++++|++|+.++|++||+++||++|++.+.....
T Consensus 2 ~~~~~~~y~~~~~~~~~g--~~HPe~p~Rl~~i~~~l~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~ 79 (376)
T 4a69_A 2 AKTVAYFYDPDVGNFHYG--AGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQ 79 (376)
T ss_dssp CCCEEEECCTTTTCCCCC--TTCSCCTHHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHCCTTTGG
T ss_pred CCeEEEEEChHHhCcCCC--CCCCcCHHHHHHHHHHHHhcCCCCCceEeCCCCCCHHHHHHhCCHHHHHHHHHhCcccch
Confidence 468999999999998654 789999999999999999999999999999999999999999999999999987653210
Q ss_pred ---ccCCCccccCCccccccchHHHHHHhcHHHHHHHHhhhh--cceeeccCCCCCCCCCCCCcccccchHHHHHHHHHH
Q 019524 112 ---IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER--GWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFV 186 (339)
Q Consensus 112 ---~e~~~~~~~~~~~~~~~~~~~a~~aagg~l~aa~~~~~~--~~a~~~~~G~HHA~~~~a~GFC~fNnvAIAa~~l~~ 186 (339)
.+.....+++||++++++++++++++||++.|++.++++ ++|++++||+|||++++++|||+|||+||||++|++
T Consensus 80 ~~~~~~~~~~l~~Dtpv~~~~~e~a~~aaGgtl~Aa~~v~~g~~~~A~~~~gG~HHA~~~~a~GFC~~NdvAiAa~~l~~ 159 (376)
T 4a69_A 80 GFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLK 159 (376)
T ss_dssp GGHHHHHHHTCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHTT
T ss_pred hhhhhhceeccCCCCCcchHHHHHHHHHHHHHHHHHHHHHcCCcceeeeCCCCCCcCCcCCCCcchhhhHHHHHHHHHHH
Confidence 001112356799999999999999999999999988764 589999998999999999999999999999999998
Q ss_pred HcCCCeEEEEeccCcCCcchhhhhcCCCcEEEEEeeCCC--CCCCCccc-------CCccccccccCCCCChHHHHHHHH
Q 019524 187 QLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IYPRDYEA-------RRFIDQKVEVVSGTTTNEYLKKLD 257 (339)
Q Consensus 187 ~~~~~RV~IiD~DvHHGnGTq~if~~d~~Vl~iSiH~~~--~yP~tg~~-------~~~~~~NvPL~~g~~d~~yl~a~~ 257 (339)
+ .+||+|||||||||||||+|||+||+|+|+|+|+.+ |||+||.. ++++++|||||+|++|++|+.+|+
T Consensus 160 ~--~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~fPgtG~~~e~G~g~g~g~~vNvPL~~G~~D~~yl~~~~ 237 (376)
T 4a69_A 160 Y--HPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQ 237 (376)
T ss_dssp T--CSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECSTTCTTCCCCTTCCCCGGGTTSEEEEEECTTCBHHHHHHHHH
T ss_pred h--CCcEEEEeccCCCCcchhhHhcCCCCEEEEecccCCCcCCCCCCCccccCCCCCCceeEeeecCCCCCHHHHHHHHH
Confidence 6 489999999999999999999999999999999965 89999753 346899999999999999999999
Q ss_pred HHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCCChhHHHHHHHHHhhh
Q 019524 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPITSEKVLALWSIRFHV 337 (339)
Q Consensus 258 ~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY~~~~~~a~~~~~~~~ 337 (339)
++|.|++++|+||+||+|||||+|++||||.|+||++||.++++.+ ++.++|+++++||||+...+..+|+..+.+
T Consensus 238 ~~l~p~~~~f~Pd~IvvsaG~Da~~~DpLg~l~Lt~~g~~~~~~~l----~~~~~p~v~v~eGGY~~~~var~w~~~~a~ 313 (376)
T 4a69_A 238 PVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYV----KSFNIPLLVLGGGGYTVRNVARCWTYETSL 313 (376)
T ss_dssp HHHHHHHHHHCCSEEEEECCGGGBTTCSSCCCBBCHHHHHHHHHHH----HTTCCCEEEECCCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEeCcccCCCCCcccCeecCHHHHHHHHHHH----HHcCCCEEEEECCCCChhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988765 456899999999999999999999988866
Q ss_pred c
Q 019524 338 F 338 (339)
Q Consensus 338 ~ 338 (339)
+
T Consensus 314 l 314 (376)
T 4a69_A 314 L 314 (376)
T ss_dssp H
T ss_pred h
Confidence 5
No 3
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=100.00 E-value=7.4e-85 Score=633.62 Aligned_cols=299 Identities=25% Similarity=0.411 Sum_probs=270.4
Q ss_pred CCcceEEECcccCcccCCCCCCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCChhHHHHhhcCCCcccc
Q 019524 32 IFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSII 111 (339)
Q Consensus 32 ~~~~~ivy~~~~~~h~~~~~~~HPe~p~R~~~i~~~L~~~gl~~~~~~~~p~~a~~e~l~~vHs~~Yv~~l~~~~~~~~~ 111 (339)
+.++.++|||+|..|.++ ++|||+|+|+++|+++|+++|+++.+++++|++|+.++|++||+++||++|++.+.....
T Consensus 2 ~~~v~~~y~~~~~~~~~g--~~HPe~P~Rl~~i~~~L~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~ 79 (367)
T 3max_A 2 KKKVCYYYDGDIGNYYYG--QGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMS 79 (367)
T ss_dssp CCCEEEECCGGGGGCCCC--TTCSCCTHHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHCCGGGGG
T ss_pred CCeEEEEECccccCcCCC--CCCCCCHHHHHHHHHHHHhcCCcccCeeeCCCCCCHHHHHhhCCHHHHHHHHHhCccccc
Confidence 468999999999999765 789999999999999999999999999999999999999999999999999987643210
Q ss_pred ---ccCCCccccCCccccccchHHHHHHhcHHHHHHHHhhh--hcceeeccCCCCCCCCCCCCcccccchHHHHHHHHHH
Q 019524 112 ---IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE--RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFV 186 (339)
Q Consensus 112 ---~e~~~~~~~~~~~~~~~~~~~a~~aagg~l~aa~~~~~--~~~a~~~~~G~HHA~~~~a~GFC~fNnvAIAa~~l~~ 186 (339)
.+.....+++||++++++++++++++||++.|++.+.+ .++|++||||+|||++++++|||+|||+||||++|++
T Consensus 80 ~~~~~~~~~~l~~Dtp~~~~~~e~a~~aaGgsl~aa~~v~~~~~~~Ai~~pgG~HHA~~~~a~GFC~~NdvaiAa~~l~~ 159 (367)
T 3max_A 80 EYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLK 159 (367)
T ss_dssp GCHHHHHHTTCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBCSCHHHHHHHHHTT
T ss_pred hhhhHhhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceEecCCCCCCcCCcCCCCCchhhhHHHHHHHHHHH
Confidence 00011235689999999999999999999999998864 5689999999999999999999999999999999987
Q ss_pred HcCCCeEEEEeccCcCCcchhhhhcCCCcEEEEEeeCCC-CCCCCccc-------CCccccccccCCCCChHHHHHHHHH
Q 019524 187 QLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG-IYPRDYEA-------RRFIDQKVEVVSGTTTNEYLKKLDE 258 (339)
Q Consensus 187 ~~~~~RV~IiD~DvHHGnGTq~if~~d~~Vl~iSiH~~~-~yP~tg~~-------~~~~~~NvPL~~g~~d~~yl~a~~~ 258 (339)
+ .+||+|||||||||||||+|||+||+|+|+|+|+.+ |||+||.. ++++++|||||+|++|++|+.+|++
T Consensus 160 ~--~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~fPgtg~~~e~G~g~g~g~~vNvPL~~g~~d~~y~~~~~~ 237 (367)
T 3max_A 160 Y--HQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP 237 (367)
T ss_dssp T--CSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECSSCTTCCCCTTCCCCGGGTTCEEEEEECTTCCHHHHHHHHHH
T ss_pred c--CCcEEEEecCCCCCchhhHHhcCCCCEEEEecccCCCCCCCCCCccccCCCCCCceEEEEecCCCCCHHHHHHHHHH
Confidence 5 489999999999999999999999999999999975 89998753 2458999999999999999999999
Q ss_pred HHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCCChhHHHHHHHHHhhhc
Q 019524 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPITSEKVLALWSIRFHVF 338 (339)
Q Consensus 259 ~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY~~~~~~a~~~~~~~~~ 338 (339)
+|.|++++|+||+||+|||||+|++||||.|+||++||.++++.+ +++++|+++++||||+...+..+|++.+.++
T Consensus 238 ~~~~~~~~f~Pd~ivvsaG~D~~~~Dplg~~~lt~~g~~~~~~~~----~~~~~p~v~~~eGGY~~~~var~wt~~ta~~ 313 (367)
T 3max_A 238 IISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVV----KTFNLPLLMLGGGGYTIRNVARCWTYETAVA 313 (367)
T ss_dssp HHHHHHHHHCCSEEEEECCGGGBTTCSSCCCCBCHHHHHHHHHHH----HTTCCCEEEECCCCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEECCccCcCCCCCCCeeeCHHHHHHHHHHH----HhcCCCEEEEeCCCCChhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999987765 5578999999999999999999999988765
No 4
>2pqp_A HD7A, histone deacetylase 7A; HDAC, structural genomics, structural genomics consortium, SGC; HET: TSN; 1.80A {Homo sapiens} PDB: 2pqo_A* 2nvr_A 3c0y_A 3c0z_A 3c10_A* 2vqm_A* 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A*
Probab=100.00 E-value=4.1e-84 Score=635.15 Aligned_cols=326 Identities=21% Similarity=0.271 Sum_probs=261.6
Q ss_pred CCCCCCcHHHHhhhhcccccccccCC-CCcceEEECcccCcccCC--CCCCCCCCChHHHHHHHHHHHCCCCCCCeeeCC
Q 019524 6 SPSVTTDAETLKRNRILSSKLYFDIP-IFKLPLIYSPDYDISFLG--IEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEP 82 (339)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ivy~~~~~~h~~~--~~~~HPe~p~R~~~i~~~L~~~gl~~~~~~~~p 82 (339)
+|.+++.++.......+++.-....| .|+|+++||++|+.|.+. .+..|||+|+|++.|+++|++.|+++.+++++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~vyd~~~l~H~~~~~~~~~HPE~P~Rl~~i~~~L~~~Gl~~~~~~~~p 87 (421)
T 2pqp_A 8 APASLSAPEPASQARVLSSSETPARTLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRG 87 (421)
T ss_dssp -------------------------CCTTCEEEECCGGGGGCCCTTCCTTSCSSCTHHHHHHHHHHHHTTCGGGSEEECC
T ss_pred CccccCCCCCCccccccCCCCCCCCCCCCeEEEEECHHHHhhccCCCCCCCCCCCcHHHHHHHHHHHhcCCcccCeeeCC
Confidence 55666667777666666666556677 489999999999999854 346899999999999999999999999999999
Q ss_pred CCCCHHHHhccCChhHHHHhhcCCCc--c-------cc--cc----C--CCccccCCcccc-ccchHHHHHHhcHHHHHH
Q 019524 83 LEASKEDLLVVHSESYLKSLQSSPNV--S-------II--IE----V--PPVALFPNCLVQ-RKVLYPFRKQVGGTILAA 144 (339)
Q Consensus 83 ~~a~~e~l~~vHs~~Yv~~l~~~~~~--~-------~~--~e----~--~~~~~~~~~~~~-~~~~~~a~~aagg~l~aa 144 (339)
++|++|+|++||+++||+.+...... . +. .+ . ....+++|++++ +.++++|++++|+++.|+
T Consensus 88 ~~At~eeL~~vHs~~YI~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~p~gg~~~D~Dt~~~~~~s~~aa~~aaG~~~~a~ 167 (421)
T 2pqp_A 88 RKASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLA 167 (421)
T ss_dssp CCCCHHHHTTTSCHHHHHHHHCCTTCSCCCCHHHHHHHHSCCCCEECTTSCEESSSSCEECTTTHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHhcCCHHHHHhhhcchhhhhhhhcccccccchhhhhhhccccCcCCCCCcccCCccHHHHHHHHHhHHHHHH
Confidence 99999999999999999865332100 0 00 00 0 112356788877 489999999999999999
Q ss_pred HHhhh----hcceeeccCCCCCCCCCCCCcccccchHHHHHHHHHHHcCCCeEEEEeccCcCCcchhhhhcCCCcEEEEE
Q 019524 145 KLAKE----RGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILD 220 (339)
Q Consensus 145 ~~~~~----~~~a~~~~~G~HHA~~~~a~GFC~fNnvAIAa~~l~~~~~~~RV~IiD~DvHHGnGTq~if~~d~~Vl~iS 220 (339)
+.+++ ++||++|||| |||++++++|||+|||+||||++|+++++++||+|||||||||||||+|||+||+|+|+|
T Consensus 168 ~~v~~g~~~~afa~~rPpG-HHA~~~~a~GFC~fNnvAiAa~~l~~~~~~~RV~ivD~DvHHGnGtq~iF~~dp~Vl~~S 246 (421)
T 2pqp_A 168 FKVASRELKNGFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYIS 246 (421)
T ss_dssp HHHHTTSSSEEEECCSSCC-TTCBTTBCBTTBSSCHHHHHHHHHHHHSTTCCEEEEECSSSCCHHHHHHHTTCTTEEEEE
T ss_pred HHHHcCccccceeeCCCCC-CCCCCCCCCcchhhCHHHHHHHHHHHhcCCCeEEEEecCCCCChhHHHHhcCCCCEEEEe
Confidence 99874 5799999998 999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCC---CCCCCCccc-------CCccccccccCC----CCChHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCC--
Q 019524 221 MFNP---GIYPRDYEA-------RRFIDQKVEVVS----GTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGD-- 284 (339)
Q Consensus 221 iH~~---~~yP~tg~~-------~~~~~~NvPL~~----g~~d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~D-- 284 (339)
+|+. +|||+||.. ++++|+|||||. +++|++|+.+|+++|.|++++|+||+||||||||+|++|
T Consensus 247 ~H~~~~g~~yPgtG~~~e~G~g~g~g~~vNvPl~~gl~~g~~d~~yl~~~~~~l~p~~~~F~PdlIvvsaG~Da~~gD~d 326 (421)
T 2pqp_A 247 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPA 326 (421)
T ss_dssp EEECGGGTSTTCCCCTTCCCCGGGTTCEEEEEECSCSSSCCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCCG
T ss_pred cccCCCCCCCCCCCChhhccCCCCccceeccccCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeCCccccccccc
Confidence 9985 599998753 346899999975 579999999999999999999999999999999999987
Q ss_pred CCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCCChhHHHHHHHHHh
Q 019524 285 PLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPITSEKVLALWSIRF 335 (339)
Q Consensus 285 plg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY~~~~~~a~~~~~~ 335 (339)
|||+|+||+++|.+++++|+++| ++|+|++|||||+...+...+...+
T Consensus 327 pLg~~~lt~~~y~~~~~~l~~~a---~grvv~vlEGGY~l~~l~~~~~a~~ 374 (421)
T 2pqp_A 327 PLGGYHVSAKCFGYMTQQLMNLA---GGAVVLALEGGHDLTAICDASEACV 374 (421)
T ss_dssp GGCCCBBCHHHHHHHHHHHTTSG---GGCEEEEECSCCCHHHHHHHHHHHH
T ss_pred ccCCceeCHHHHHHHHHHHHHHc---CCCEEEEECCCCChHHHHHHHHHHH
Confidence 99999999999999999998766 7899999999999865444444433
No 5
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A*
Probab=100.00 E-value=2.7e-84 Score=633.91 Aligned_cols=299 Identities=22% Similarity=0.337 Sum_probs=267.5
Q ss_pred CcceEEECcccCcccCCCCCCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCChhHHHHhhcCCCccc--
Q 019524 33 FKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNVSI-- 110 (339)
Q Consensus 33 ~~~~ivy~~~~~~h~~~~~~~HPe~p~R~~~i~~~L~~~gl~~~~~~~~p~~a~~e~l~~vHs~~Yv~~l~~~~~~~~-- 110 (339)
++++++|||+|..|.+ +++|||+|+|++.|+++|++.|+++.+++++|++|+.++|++||+++||++|++.+....
T Consensus 2 ~~t~~vy~~~~~~h~~--g~~Hpe~p~R~~~i~~~l~~~gl~~~~~~~~p~~at~~~l~~vH~~~Yv~~l~~~~~~~~~~ 79 (375)
T 1c3p_A 2 KKVKLIGTLDYGKYRY--PKNHPLKIPRVSLLLRFKDAMNLIDEKELIKSRPATKEELLLFHTEDYINTLMEAERCQCVP 79 (375)
T ss_dssp CCEEEEECGGGGGSCC--CTTCGGGSCCHHHHHHHHHHTTCCCGGGEEECCCCCHHHHTTTSCHHHHHHHHHHHHHTSCC
T ss_pred ceEEEEECHHHcCCCC--CCCCCCCHHHHHHHHHHHHhcCCCCCCeEeCCCCCCHHHHHHhCCHHHHHHHHHhccccCCC
Confidence 4689999999999865 478999999999999999999999999999999999999999999999999987543210
Q ss_pred cccCCCccc-cCCccccccchHHHHHHhcHHHHHHHHhhhhcceeeccCCCCCCCCCCCCcccccchHHHHHHHHHHHcC
Q 019524 111 IIEVPPVAL-FPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLN 189 (339)
Q Consensus 111 ~~e~~~~~~-~~~~~~~~~~~~~a~~aagg~l~aa~~~~~~~~a~~~~~G~HHA~~~~a~GFC~fNnvAIAa~~l~~~~~ 189 (339)
..+.....+ ++||++++++++++++++||++.|++.+++++.++++|||+|||++++++|||+|||+||||++|+++ |
T Consensus 80 ~~~~~~~~l~~~dtp~~~~~~~~a~~aaGg~l~aa~~v~~g~~a~~ppGG~HHA~~~~a~GFC~fNnvAiAa~~l~~~-g 158 (375)
T 1c3p_A 80 KGAREKYNIGGYENPVSYAMFTGSSLATGSTVQAIEEFLKGNVAFNPAGGMHHAFKSRANGFCYINNPAVGIEYLRKK-G 158 (375)
T ss_dssp TTHHHHHCCSSSSSCSSTTTTHHHHHHHHHHHHHHHHHHTTCEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHHHT-T
T ss_pred hHHhhccccCCCCcccChhHHHHHHHHhhHHHHHHHHHHcCCceeecCcccceeeeccCCCceeecHHHHHHHHHHHh-C
Confidence 000001123 58999999999999999999999999999888888888888999999999999999999999999886 5
Q ss_pred CCeEEEEeccCcCCcchhhhhcCCCcEEEEEeeCCC--CCCCCccc--------CCccccccccCCCCChHHHHHHHHHH
Q 019524 190 ISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IYPRDYEA--------RRFIDQKVEVVSGTTTNEYLKKLDEA 259 (339)
Q Consensus 190 ~~RV~IiD~DvHHGnGTq~if~~d~~Vl~iSiH~~~--~yP~tg~~--------~~~~~~NvPL~~g~~d~~yl~a~~~~ 259 (339)
.+||+|||||||||||||+|||+||+|+|+|+|+.+ |||+||.. ++++++|||||+|++|++|+.+|+++
T Consensus 159 ~~RV~IvD~DvHHGnGtq~iF~~dp~Vl~~SiH~~~~~ffPgtG~~~e~G~~g~g~g~~vNvPL~~g~~D~~yl~a~~~~ 238 (375)
T 1c3p_A 159 FKRILYIDLDAHHCDGVQEAFYDTDQVFVLSLHQSPEYAFPFEKGFLEEIGEGKGKGYNLNIPLPKGLNDNEFLFALEKS 238 (375)
T ss_dssp CCCEEEEECSSSCCHHHHHHHTTCSSEEEEEEEECTTTSTTSSSCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHHHHHH
T ss_pred CCeEEEEecCCCCCHHHHHHhccCCCEEEEecccCCCCCCCCCCCccccCCcCCCCceEEEEeCCCCCCHHHHHHHHHHH
Confidence 699999999999999999999999999999999976 67999742 23689999999999999999999999
Q ss_pred HHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCCChhHHHHHHHHHhhhc
Q 019524 260 LEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPITSEKVLALWSIRFHVF 338 (339)
Q Consensus 260 l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY~~~~~~a~~~~~~~~~ 338 (339)
|.|++++|+||+||||||||+|++||||.|+||+++|.++++.|++++ .|++++|||||+...+..+|+..+.++
T Consensus 239 l~p~l~~F~PdlIvvsaG~Da~~~DpLg~l~lt~~g~~~~~~~l~~~a----~~vv~vleGGY~~~~l~~~~~~~~~~l 313 (375)
T 1c3p_A 239 LEIVKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAFLKAFNIVREVF----GEGVYLGGGGYHPYALARAWTLIWCEL 313 (375)
T ss_dssp HHHHHHHCCCSEEEEECCSTTBTTCTTCSCCBCHHHHHHHHHHHHHHH----CSCEEECCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEECCccccCCCCCCCcccCHHHHHHHHHHHHHhc----cceEEEECCCCChHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999887 469999999999988888887766543
No 6
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=100.00 E-value=4.9e-83 Score=623.71 Aligned_cols=300 Identities=24% Similarity=0.370 Sum_probs=266.2
Q ss_pred cCCCCcceEEECcccCcccCCCCCCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCChhHHHHhhcCCCc
Q 019524 29 DIPIFKLPLIYSPDYDISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNV 108 (339)
Q Consensus 29 ~~~~~~~~ivy~~~~~~h~~~~~~~HPe~p~R~~~i~~~L~~~gl~~~~~~~~p~~a~~e~l~~vHs~~Yv~~l~~~~~~ 108 (339)
..++.++.++|||+|..|. .+|||+|+|++.+.++|++.|+++.+++++|++|+.++|++||+++||++|++.+..
T Consensus 10 ~~~~~~~~~~y~~~~~~~~----~~HPe~P~Rl~~i~~ll~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~ 85 (388)
T 3ew8_A 10 SGQSLVPVYIYSPEYVSMC----DSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE 85 (388)
T ss_dssp ----CCCEEECCHHHHHHH----TTCTTSTTHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEEChHHhccC----CCCCCCcHHHHHHHHHHHHcCCcccCeEeCCCCCCHHHHHhhCCHHHHHHHHHhccc
Confidence 3457789999999999873 469999999999999999999999999999999999999999999999999875432
Q ss_pred ccc--ccCCCccccCCccccccchHHHHHHhcHHHHHHHHhhhh--cceeeccCCCCCCCCCCCCcccccchHHHHHHHH
Q 019524 109 SII--IEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKER--GWAINVGGGFHHCSADEGGGFCAYADISLCIHYA 184 (339)
Q Consensus 109 ~~~--~e~~~~~~~~~~~~~~~~~~~a~~aagg~l~aa~~~~~~--~~a~~~~~G~HHA~~~~a~GFC~fNnvAIAa~~l 184 (339)
... .+.....+..||++++++++++++++||++.|++.++++ ++|+++|||+|||++++++|||+|||+||||++|
T Consensus 86 ~~~~~~~~~~~~lg~Dtp~~~~~~e~a~~aaGgsl~Aa~~v~~g~~~~Ai~~pGG~HHA~~~~a~GFC~~NdiaiAa~~l 165 (388)
T 3ew8_A 86 GDDDHPDSIEYGLGYLCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRL 165 (388)
T ss_dssp C--------CCSCSSSSCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHH
T ss_pred ccccchhhhhccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHcCCCceeeecCCcccceeecCCCCchhhhHHHHHHHHH
Confidence 110 011122345799999999999999999999999999875 5899999988999999999999999999999999
Q ss_pred HHHcCCCeEEEEeccCcCCcchhhhhcCCCcEEEEEeeCC--CCCCCCccc-------CCccccccccCCCCChHHHHHH
Q 019524 185 FVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP--GIYPRDYEA-------RRFIDQKVEVVSGTTTNEYLKK 255 (339)
Q Consensus 185 ~~~~~~~RV~IiD~DvHHGnGTq~if~~d~~Vl~iSiH~~--~~yP~tg~~-------~~~~~~NvPL~~g~~d~~yl~a 255 (339)
+++ .+||+|||||||||||||+|||+||+|+|+|+|+. +|||+||.. ++++++|||||+|++|++|+.+
T Consensus 166 ~~~--~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~fPgtG~~~e~G~g~g~g~~vNvPL~~G~~d~~y~~~ 243 (388)
T 3ew8_A 166 RRK--FERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243 (388)
T ss_dssp TTT--CSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECCTTCTTCCCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHH
T ss_pred Hhc--CCeEEEEecCCCCChhHHHHhccCCCEEEEecCCCCCCCCCCCCCcccccCCCCcceeeeccCCCCCCHHHHHHH
Confidence 874 68999999999999999999999999999999985 599998753 3468999999999999999999
Q ss_pred HHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCCChhHHHHHHHHHh
Q 019524 256 LDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPITSEKVLALWSIRF 335 (339)
Q Consensus 256 ~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY~~~~~~a~~~~~~ 335 (339)
|+++|.|++++|+||+||||||||+|++||||.|+||++||.++++.|+ +.++|+++++||||+..++..+|+..+
T Consensus 244 ~~~~l~p~~~~F~PdlIvvsaG~Da~~~DpLg~l~lt~~g~~~~~~~l~----~~~~p~l~~~gGGY~~~~var~w~~~~ 319 (388)
T 3ew8_A 244 CESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYIL----QWQLATLILGGGGYNLANTARCWTYLT 319 (388)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCSTTBTTCTTCCCCBCHHHHHHHHHHHH----TTCCEEEEECCCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEECCccCCCCCCCCCCcCCHHHHHHHHHHHH----hcCCCEEEEECCCCChhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988875 357999999999999999999999877
Q ss_pred hhc
Q 019524 336 HVF 338 (339)
Q Consensus 336 ~~~ 338 (339)
.++
T Consensus 320 ~~l 322 (388)
T 3ew8_A 320 GVI 322 (388)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 7
>2vqm_A HD4, histone deacetylase 4; inhibitor, repressor, chromatin, coiled coil, transcription regulation, UBL conjugation, chromatin regulator; HET: HA3; 1.8A {Homo sapiens} PDB: 2vqj_A* 2vqw_G 2vqq_A* 2vqo_A* 2vqv_A* 3c10_A* 3c0z_A 3c0y_A*
Probab=100.00 E-value=1.2e-81 Score=622.39 Aligned_cols=306 Identities=20% Similarity=0.284 Sum_probs=263.5
Q ss_pred cCCCCcceEEECcccCcccCCCC--CCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCChhHHHHhhcCC
Q 019524 29 DIPIFKLPLIYSPDYDISFLGIE--KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSP 106 (339)
Q Consensus 29 ~~~~~~~~ivy~~~~~~h~~~~~--~~HPe~p~R~~~i~~~L~~~gl~~~~~~~~p~~a~~e~l~~vHs~~Yv~~l~~~~ 106 (339)
..|+|+|+++||++|+.|.++++ ..|||+|+|++.|+++|++.|+++.+++++|++|+.|+|++||+++||+.++...
T Consensus 4 ~~p~~~Tg~vyd~~~l~H~~~~g~~~~HPE~P~Rl~~i~~~L~~~gl~~~~~~~~p~~At~eeL~~vHs~~Yv~~~~~~~ 83 (413)
T 2vqm_A 4 TKPRFTTGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNP 83 (413)
T ss_dssp --CCSSEEEECCGGGCSCCCTTC-------CCCHHHHHHHHHHHHTHHHHSEEECCCCCCHHHHTTTSCHHHHHHHHSCG
T ss_pred CCCCCeEEEEEcHHHhccCCCCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCeEeCCCCCCHHHHHHhCCHHHHHHHhcCc
Confidence 46899999999999999987653 5699999999999999999999999999999999999999999999999887643
Q ss_pred Cccccc----------------cCCCccccCCccccc-cchHHHHHHhcHHHHHHHHhhh----hcceeeccCCCCCCCC
Q 019524 107 NVSIII----------------EVPPVALFPNCLVQR-KVLYPFRKQVGGTILAAKLAKE----RGWAINVGGGFHHCSA 165 (339)
Q Consensus 107 ~~~~~~----------------e~~~~~~~~~~~~~~-~~~~~a~~aagg~l~aa~~~~~----~~~a~~~~~G~HHA~~ 165 (339)
...... ......++.|+.+++ .++++|++++|+++.|++.+++ ++||+++||| |||++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~dt~~~~~~s~~aA~laaG~~l~a~~~v~~g~~~~afa~vrppG-HHA~~ 162 (413)
T 2vqm_A 84 LNRQKLDSKKLLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPPG-HHAEE 162 (413)
T ss_dssp GGGCC----HHHHHHHHHEEECTTSCEEECTTSTHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEEECCCSCC-TTCBT
T ss_pred hhhhHhhhhhhccchhhhhhccccCCcCccCCccccchhHHHHHHHHHHHHHHHHHHHhcCCccceeeeccccc-ccCcC
Confidence 221100 011233456666554 6889999999999999999875 4689999988 99999
Q ss_pred CCCCcccccchHHHHHHHHHHHcCCCeEEEEeccCcCCcchhhhhcCCCcEEEEEeeCC---CCCCCCccc-------CC
Q 019524 166 DEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP---GIYPRDYEA-------RR 235 (339)
Q Consensus 166 ~~a~GFC~fNnvAIAa~~l~~~~~~~RV~IiD~DvHHGnGTq~if~~d~~Vl~iSiH~~---~~yP~tg~~-------~~ 235 (339)
++++|||+|||+||||++|+++++++||+|||||||||||||+|||+||+|+|+|+|+. +|||+||.. +.
T Consensus 163 ~~a~GFC~~Nnvaiaa~~~~~~~~~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~f~pgtG~~~e~G~g~g~ 242 (413)
T 2vqm_A 163 STPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGV 242 (413)
T ss_dssp TBCBTTBSSCHHHHHHHHHHHHSCCSCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECGGGCSTTCCCCTTCCCSGGGT
T ss_pred CCCCCccccchHHHHHHHHHHhcCCCeEEEEecccCCCccHHHHHhcCcccccccchhccCCCCCCCCCCHHHcCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999985 589999853 34
Q ss_pred ccccccccC----CCCChHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCC--CCCCCCccCHHHHHHHHHHHHHHHhh
Q 019524 236 FIDQKVEVV----SGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEG--DPLGMLKISPDGIAARDEKTFRFARS 309 (339)
Q Consensus 236 ~~~~NvPL~----~g~~d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~--Dplg~~~lt~~g~~~~~~~l~~~a~~ 309 (339)
++|+|+||+ ++++|++|+.+|+++|.|++++|+||+||||||||+|++ ||||+|+||+++|.+++++|+++|
T Consensus 243 g~~~n~pl~~g~~~~~~D~~y~~~~~~~v~p~~~~f~PdlivvsaG~Da~~~d~D~lg~~~lt~~~~~~~~~~l~~~a-- 320 (413)
T 2vqm_A 243 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLA-- 320 (413)
T ss_dssp TCEEEEEECSCSSSCCCHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBSSCTTTTCCCCBCHHHHHHHHHHHHTSG--
T ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcCCCCCCCCCcccCHHHHHHHHHHHHHhc--
Confidence 689999987 568999999999999999999999999999999999998 669999999999999999998776
Q ss_pred CCCCEEEEeCCCCChhHHHHHHHHHhhhc
Q 019524 310 RNIPIVMLTSGPITSEKVLALWSIRFHVF 338 (339)
Q Consensus 310 ~~~p~v~vleGGY~~~~~~a~~~~~~~~~ 338 (339)
++|+|++|||||+...+..+|+..+..+
T Consensus 321 -~~~~v~vleGGY~~~~l~~~~~~~~~~l 348 (413)
T 2vqm_A 321 -GGRIVLALEGGHDLTAICDASEACVSAL 348 (413)
T ss_dssp -GGCEEEEECCCCCHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEeCcCCChHHHHHHHHHHHHHH
Confidence 6899999999999987777877766554
No 8
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A*
Probab=100.00 E-value=3.4e-81 Score=602.69 Aligned_cols=289 Identities=19% Similarity=0.267 Sum_probs=251.4
Q ss_pred ceEEECcccCcccCCCC------CCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCChhHHHHhhcCCCc
Q 019524 35 LPLIYSPDYDISFLGIE------KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQSSPNV 108 (339)
Q Consensus 35 ~~ivy~~~~~~h~~~~~------~~HPe~p~R~~~i~~~L~~~gl~~~~~~~~p~~a~~e~l~~vHs~~Yv~~l~~~~~~ 108 (339)
+.++|||+|..|..+.. ..|||+|+|+++|+++|++.|+. ++++|++|+.++|++||+++||++|++.+..
T Consensus 1 m~~v~~~~~~~H~~~~~~~~G~~~~HPE~P~Rl~~i~~~L~~~gl~---~~~~p~~at~e~L~~vHs~~Yi~~l~~~~~~ 77 (341)
T 3q9b_A 1 MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFD---DVVAPARHGLETVLKVHDAGYLNFLETAWDR 77 (341)
T ss_dssp CEEECCGGGGGCCCSCEEETTEEECCSSCTHHHHHHHHHHHHTTCC---CEECCCCCCSTTGGGTSCHHHHHHHHHHHHH
T ss_pred CEEEECcHHhccCCcccccCCCcCCCCCChHHHHHHHHHHHhCCCC---ceeCCCCCCHHHHHHhCCHHHHHHHHHhhhh
Confidence 46899999999976421 25999999999999999999985 5789999999999999999999999875321
Q ss_pred c-----c---cccC----------C--------CccccCCccccccchHHHHHHhcHHHHHHHHhhh---hcceeeccCC
Q 019524 109 S-----I---IIEV----------P--------PVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE---RGWAINVGGG 159 (339)
Q Consensus 109 ~-----~---~~e~----------~--------~~~~~~~~~~~~~~~~~a~~aagg~l~aa~~~~~---~~~a~~~~~G 159 (339)
. . ..+. + ...+++||++++++|+++++++|+++.|++.+++ ++||++||||
T Consensus 78 ~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~g~~~~d~dt~~~~~~~~aa~~aaG~~l~a~~~v~~g~~~afal~rppG 157 (341)
T 3q9b_A 78 WKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPG 157 (341)
T ss_dssp HHHTTCSSCBCCCBCCCTTCCCCCCSSHHHHHHHTBSBTTCCBCTTHHHHHHHHHHHHHHHHHHHHHTCSEEEECCSSCC
T ss_pred hhhcccccccccccccccccccccccchhcccceeccCCCCCcChhHHHHHHHHHHHHHHHHHHHHhCCCceEecCCCCC
Confidence 0 0 0000 0 0235789999999999999999999999999986 4699999998
Q ss_pred CCCCCCCCCCcccccchHHHHHHHHHHHcCCCeEEEEeccCcCCcchhhhhcCCCcEEEEEeeCC--CCCCC-Cccc---
Q 019524 160 FHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP--GIYPR-DYEA--- 233 (339)
Q Consensus 160 ~HHA~~~~a~GFC~fNnvAIAa~~l~~~~~~~RV~IiD~DvHHGnGTq~if~~d~~Vl~iSiH~~--~~yP~-tg~~--- 233 (339)
|||++++++|||+|||+||||++|+++ |++||+|||||||||||||+|||+||+|+|+|+|+. .+||+ ||..
T Consensus 158 -HHA~~~~a~GFC~~NnvaiAa~~l~~~-g~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~yP~~tG~~~e~ 235 (341)
T 3q9b_A 158 -HHAGIDMFGGYCFINNAAVAAQRLLDK-GAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPHFLGYAEET 235 (341)
T ss_dssp -TTCBTTBBBTTBSSCHHHHHHHHHHHT-TCSCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECGGGSTTCSSCCTTCC
T ss_pred -CCCCCCCCCCccccCHHHHHHHHHHHc-CCCeEEEEecCCCCCcchhHHhcCCCCEEEEeccCCCccCCCCCCCccccc
Confidence 999999999999999999999999985 699999999999999999999999999999999997 49999 6642
Q ss_pred ----CCccccccccCCCCChHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhh
Q 019524 234 ----RRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARS 309 (339)
Q Consensus 234 ----~~~~~~NvPL~~g~~d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~ 309 (339)
++++++|||||+|++|++|+.+|++++ |.+++|+||+||||||||+|++||||.|+||+++|.++++.++ +
T Consensus 236 G~g~g~g~~vNvpL~~g~~d~~y~~~~~~~l-~~l~~f~Pd~ivvsaG~D~~~~Dplg~~~lt~~~~~~~~~~l~----~ 310 (341)
T 3q9b_A 236 GKGAGAGTTANYPMGRGTPYSVWGEALTDSL-KRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIA----A 310 (341)
T ss_dssp CCGGGTTCEEEEEECTTCBHHHHHHHHHHHH-HHHHHHTCSCEEEEECCTTBTTCTTCCCBBCTTHHHHHHHHHH----T
T ss_pred CCCCCCceeEeeecCCCCChHHHHHHHHHHH-HHHHhhCCCEEEEeCCccccCCCCCCCccCCHHHHHHHHHHHH----H
Confidence 246899999999999999999999976 5679999999999999999999999999999999999888774 4
Q ss_pred CCCCEEEEeCCCCChhHHHHHHHHH
Q 019524 310 RNIPIVMLTSGPITSEKVLALWSIR 334 (339)
Q Consensus 310 ~~~p~v~vleGGY~~~~~~a~~~~~ 334 (339)
.++|++++|||||+.. .++.++..
T Consensus 311 ~~~~~v~vleGGY~~~-~l~~~~~~ 334 (341)
T 3q9b_A 311 SGVPLLVVMEGGYGVP-EIGLNVAN 334 (341)
T ss_dssp TSSCEEEEECCCCCCT-THHHHHHH
T ss_pred hCCCEEEEECCCCChH-HHHHHHHH
Confidence 5789999999999885 55555443
No 9
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=100.00 E-value=4.2e-81 Score=605.31 Aligned_cols=292 Identities=19% Similarity=0.292 Sum_probs=251.3
Q ss_pred cCCCCcceEEECcccCcccCCCC------CCCCCCChHHHHHHHHHHHCCCCCCCeeeCCCCCCHHHHhccCChhHHHHh
Q 019524 29 DIPIFKLPLIYSPDYDISFLGIE------KLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSL 102 (339)
Q Consensus 29 ~~~~~~~~ivy~~~~~~h~~~~~------~~HPe~p~R~~~i~~~L~~~gl~~~~~~~~p~~a~~e~l~~vHs~~Yv~~l 102 (339)
+.| +.+.++|||+|+.|..+.. ..|||+|+|+++|+++|++.|+ ++++|++|+.++|++||+++||++|
T Consensus 17 ~~~-~~M~~~~~~~~~~H~~~~~~~~G~~~~HPE~P~Rl~~i~~~L~~~gl----~~~~p~~At~e~L~~vHs~~YI~~l 91 (362)
T 3men_A 17 QGP-GSMLTYFHPDQSLHHPRTYFSRGRMRMPQEVPERAARLVAAAFAMGF----PVREPDDFGIAPIAAVHDTHYLRFL 91 (362)
T ss_dssp -----CCEEECCGGGGGCCCCCEEETTEEECCCSCTHHHHHHHHHHHHTTC----CEECCCCCCSHHHHTTSCHHHHHHH
T ss_pred cCC-CceEEEEChHHHhhCCccccccCCcCCCCCChHHHHHHHHHHHhCCC----eEeCCCCCCHHHHHHhCCHHHHHHH
Confidence 455 3456999999999976521 2699999999999999999997 6899999999999999999999999
Q ss_pred hcCCCccc------ccc-CC------------------CccccCCccccccchHHHHHHhcHHHHHHHHhhh---hccee
Q 019524 103 QSSPNVSI------IIE-VP------------------PVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKE---RGWAI 154 (339)
Q Consensus 103 ~~~~~~~~------~~e-~~------------------~~~~~~~~~~~~~~~~~a~~aagg~l~aa~~~~~---~~~a~ 154 (339)
++.+.... ..| ++ ...+++||++++++|++|++++|+++.|++.+++ ++||+
T Consensus 92 ~~~~~~~~~~~~~~~~e~~p~~~p~~~~~p~~~~~~~g~~~~d~Dtpv~~~~~~aa~~aaG~~l~aa~~v~~g~~~afal 171 (362)
T 3men_A 92 ETVHREWKAMPEDWGDEAMSNIFVREPNALRGVLAQAARHLADGSCPVGEHTWRAAYWSAQSALAAAAAVRDGAPAAYAL 171 (362)
T ss_dssp HHHHHHHHTSCGGGCSSBCCCBCCCSSCCCCSHHHHHHHHBCBTTCCBCTTHHHHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHhhhhhhhcccccccccccccccccccccccccccccccccCCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCceEEe
Confidence 87542100 000 00 0235789999999999999999999999999985 46999
Q ss_pred eccCCCCCCCCCCCCcccccchHHHHHHHHHHHcCCCeEEEEeccCcCCcchhhhhcCCCcEEEEEeeCC--CCCCC-Cc
Q 019524 155 NVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNP--GIYPR-DY 231 (339)
Q Consensus 155 ~~~~G~HHA~~~~a~GFC~fNnvAIAa~~l~~~~~~~RV~IiD~DvHHGnGTq~if~~d~~Vl~iSiH~~--~~yP~-tg 231 (339)
+|||| |||++++++|||+|||+||||++|+++ .+||+|||||||||||||+|||+||+|+|+|+|+. .+||+ ||
T Consensus 172 ~rPpG-HHA~~~~a~GFC~fNnvAiAa~~l~~~--~~RV~ivD~DvHHGnGtq~iF~~d~~Vl~~S~H~~~~~~yP~~tG 248 (362)
T 3men_A 172 CRPPG-HHARVDAAGGFCYLNNAAIAAQALRAR--HARVAVLDTDMHHGQGIQEIFYARRDVLYVSIHGDPTNFYPAVAG 248 (362)
T ss_dssp CSSCC-TTCBTTBBBTTBSSCHHHHHHHHHTTT--CSCEEEEECSSSCCHHHHHHTTTCSSEEEEEEEECCTTSTTCSSC
T ss_pred CCCCC-CCCCCCCCCCccccCHHHHHHHHHHHc--CCeEEEEeCcCCCchhHhHHhcCCCCEEEEEecCCCccCCCCCCC
Confidence 99988 999999999999999999999999987 58999999999999999999999999999999996 49999 66
Q ss_pred cc-------CCccccccccCCCCChHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHH
Q 019524 232 EA-------RRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTF 304 (339)
Q Consensus 232 ~~-------~~~~~~NvPL~~g~~d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~ 304 (339)
.. ++++++|||||+|++|++|+.+|++++ |++++|+||+||||||||+|++||||.|+||+++|.++++.++
T Consensus 249 ~~~e~G~g~g~g~~vNvPL~~g~~d~~yl~~~~~~l-~~l~~f~PdlIvvsaG~Da~~~Dplg~l~lt~~~~~~~~~~l~ 327 (362)
T 3men_A 249 FDDERGAGEGLGYNVNLPMPHGSSEAAFFERVDDAL-RELRRFAPDALVLSLGFDVYRDDPQSQVAVTTDGFGRLGHLIG 327 (362)
T ss_dssp CTTCCCSGGGTTSEEEEEECTTBCHHHHHHHHHHHH-HHHHHHCCSEEEEEECSTTBTTCTTCCBCBCHHHHHHHHHHHH
T ss_pred ccccccCCCCCceeEeeccCCCCChHHHHHHHHHHH-HHHHhcCCCEEEEECcccCcCCCCCCCccCCHHHHHHHHHHHH
Confidence 42 246899999999999999999999976 6779999999999999999999999999999999999888774
Q ss_pred HHHhhCCCCEEEEeCCCCChhHHHHHHHHH
Q 019524 305 RFARSRNIPIVMLTSGPITSEKVLALWSIR 334 (339)
Q Consensus 305 ~~a~~~~~p~v~vleGGY~~~~~~a~~~~~ 334 (339)
+.++|++++|||||+.. .+++++..
T Consensus 328 ----~~~~~~v~vleGGY~~~-~l~~~~~a 352 (362)
T 3men_A 328 ----ALRLPTVIVQEGGYHIE-SLEANARS 352 (362)
T ss_dssp ----TTCCCEEEEECCCCCHH-HHHHHHHH
T ss_pred ----hhCCCEEEEECCCCCHH-HHHHHHHH
Confidence 45789999999999984 56666544
No 10
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=87.50 E-value=3.2 Score=34.43 Aligned_cols=49 Identities=14% Similarity=0.217 Sum_probs=35.1
Q ss_pred HHHhhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEE
Q 019524 262 VAGHTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVML 317 (339)
Q Consensus 262 p~~~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~v 317 (339)
..+...+||+|||..|. |... ..+.+.|...-+.+++.+++.+.+++++
T Consensus 56 ~~~~~~~pd~Vii~~G~ND~~~-------~~~~~~~~~~l~~li~~~~~~~~~vil~ 105 (190)
T 1ivn_A 56 ALLKQHQPRWVLVELGGNDGLR-------GFQPQQTEQTLRQILQDVKAANAEPLLM 105 (190)
T ss_dssp HHHHHHCCSEEEEECCTTTTSS-------SCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhcCCCEEEEEeecccccc-------CCCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 34456799999999997 4432 3567888877777777777777666655
No 11
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=86.56 E-value=1.5 Score=36.11 Aligned_cols=60 Identities=17% Similarity=0.269 Sum_probs=40.8
Q ss_pred CChHHHHHHHHHHHHHHHhhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEE
Q 019524 247 TTTNEYLKKLDEALEVAGHTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVML 317 (339)
Q Consensus 247 ~~d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~v 317 (339)
.+-.+.+..++. .+..++||+|++..|. |... ..+.+.|...-+.+.+.+++.+.+++++
T Consensus 49 ~~~~~~~~~~~~----~~~~~~pd~vvi~~G~ND~~~-------~~~~~~~~~~~~~~i~~~~~~~~~vvl~ 109 (185)
T 3hp4_A 49 ETSGGALRRLDA----LLEQYEPTHVLIELGANDGLR-------GFPVKKMQTNLTALVKKSQAANAMTALM 109 (185)
T ss_dssp CCHHHHHHHHHH----HHHHHCCSEEEEECCHHHHHT-------TCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccHHHHHHHHHH----HHhhcCCCEEEEEeecccCCC-------CcCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 334445555544 3456799999999997 5533 3467888877777778777777666655
No 12
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=83.70 E-value=4.7 Score=34.34 Aligned_cols=65 Identities=17% Similarity=0.153 Sum_probs=42.2
Q ss_pred ChHHHHHHHHHHHHHHHhhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 248 TTNEYLKKLDEALEVAGHTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 248 ~d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
+-...+..+++.+. ...+||+|+|..|. |..... .-..+.+.|...-+.+++.+++.+.+++++.
T Consensus 55 ~~~~~~~~~~~~~~---~~~~pd~vvi~~G~ND~~~~~---~~~~~~~~~~~~l~~~i~~~~~~~~~vil~~ 120 (240)
T 3mil_A 55 TSRWALKILPEILK---HESNIVMATIFLGANDACSAG---PQSVPLPEFIDNIRQMVSLMKSYHIRPIIIG 120 (240)
T ss_dssp CHHHHHHHHHHHHH---HCCCEEEEEEECCTTTTSSSS---TTCCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred cHHHHHHHHHHHhc---ccCCCCEEEEEeecCcCCccC---CCCCCHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 33455555554332 23799999999998 654321 2346788888777777777777776666654
No 13
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=81.48 E-value=2.4 Score=35.38 Aligned_cols=51 Identities=18% Similarity=0.286 Sum_probs=36.1
Q ss_pred HhhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 264 GHTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 264 ~~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
+..++||+|+|..|. |...... ..+.+.|..-.+.+.+.+++.+.+++++.
T Consensus 70 ~~~~~pd~vvi~~G~ND~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~vil~~ 121 (204)
T 3p94_A 70 VINLKPKAVVILAGINDIAHNNG----VIALENVFGNLVSMAELAKANHIKVIFCS 121 (204)
T ss_dssp TGGGCEEEEEEECCHHHHTTTTS----CCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHhCCCCEEEEEeecCccccccC----CCCHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 356799999999998 6654321 25678888777777777777666766653
No 14
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=81.23 E-value=4.9 Score=33.62 Aligned_cols=57 Identities=9% Similarity=0.119 Sum_probs=38.4
Q ss_pred cCCCCChHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCC
Q 019524 243 VVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRN 311 (339)
Q Consensus 243 L~~g~~d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~ 311 (339)
...+++....+..+++. +...+||+|++..|.- | +..+.+.|.+--+.+.+.+++.+
T Consensus 53 ~~~~~~~~~~~~~~~~~----~~~~~pd~Vvi~~G~N----D----~~~~~~~~~~~l~~ii~~l~~~~ 109 (200)
T 4h08_A 53 NSKSVGDPALIEELAVV----LKNTKFDVIHFNNGLH----G----FDYTEEEYDKSFPKLIKIIRKYA 109 (200)
T ss_dssp ESCCTTCHHHHHHHHHH----HHHSCCSEEEECCCSS----C----TTSCHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCccHHHHHHHHHHH----HhcCCCCeEEEEeeeC----C----CCCCHHHHHHHHHHHHHHHhhhC
Confidence 33455556666555544 4568999999999972 3 24678888877777777776653
No 15
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=79.72 E-value=2.1 Score=38.26 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHhhcCCCEEEEEcCC-CCCCCCCCCCC
Q 019524 252 YLKKLDEALEVAGHTFDPELVIYNAGT-DILEGDPLGML 289 (339)
Q Consensus 252 yl~a~~~~l~p~~~~f~PdlIvvsaG~-D~~~~Dplg~~ 289 (339)
.+..+++++.. ...+||+|+|..|. |.....|++.+
T Consensus 74 ~~~~~~~~l~~--~~~~pd~V~I~~G~ND~~~~~~~~~~ 110 (274)
T 3bzw_A 74 VPRQAEKLKKE--HGGEVDAILVFMGTNDYNSSVPIGEW 110 (274)
T ss_dssp HHHHHHHHHHH--HTTTCCEEEEECCHHHHHTTCCCCCS
T ss_pred HHHHHHHHHhc--cCCCCCEEEEEEecccCcccCCCccc
Confidence 45555553321 23799999999999 88877777653
No 16
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=79.46 E-value=4.2 Score=34.22 Aligned_cols=51 Identities=22% Similarity=0.204 Sum_probs=36.2
Q ss_pred HHhhcCC-CEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCC---------CCEEEEe
Q 019524 263 AGHTFDP-ELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSRN---------IPIVMLT 318 (339)
Q Consensus 263 ~~~~f~P-dlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~---------~p~v~vl 318 (339)
.+..++| |+|+|..|. |... ....+.+.|..--+.+.+.+++.+ .+++++.
T Consensus 77 ~l~~~~p~d~vvi~~G~ND~~~-----~~~~~~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~ 138 (216)
T 2q0q_A 77 CLATHLPLDLVIIMLGTNDTKA-----YFRRTPLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVS 138 (216)
T ss_dssp HHHHHCSCSEEEEECCTGGGSG-----GGCCCHHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEE
T ss_pred HHHhCCCCCEEEEEecCcccch-----hcCCCHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEe
Confidence 3456788 999999998 5532 234678888877777777777766 5666664
No 17
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=77.97 E-value=1.8 Score=36.32 Aligned_cols=54 Identities=13% Similarity=0.138 Sum_probs=37.4
Q ss_pred HhhcCCCEEEEEcCC-CCCCCCCCC---CCccCHHHHHHHHHHHHHHHhhCCCCEEEE
Q 019524 264 GHTFDPELVIYNAGT-DILEGDPLG---MLKISPDGIAARDEKTFRFARSRNIPIVML 317 (339)
Q Consensus 264 ~~~f~PdlIvvsaG~-D~~~~Dplg---~~~lt~~g~~~~~~~l~~~a~~~~~p~v~v 317 (339)
+...+||+|+|..|. |.....+.+ ....+.+.|...-+.+++.+++.+.+++++
T Consensus 79 ~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~ 136 (216)
T 3rjt_A 79 VMALQPDYVSLMIGVNDVWRQFDMPLVVERHVGIDEYRDTLRHLVATTKPRVREMFLL 136 (216)
T ss_dssp TGGGCCSEEEEECCHHHHHHHHHSTTCGGGCCCHHHHHHHHHHHHHHHGGGSSEEEEE
T ss_pred HhhcCCCEEEEEeeccccchhhccccccccCCCHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 456799999999997 554322111 124668888887777888887777777666
No 18
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=74.18 E-value=5.7 Score=33.81 Aligned_cols=70 Identities=23% Similarity=0.346 Sum_probs=39.7
Q ss_pred cccccCCCCChHHHHHHHHHHHHHHHhhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEE
Q 019524 239 QKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVML 317 (339)
Q Consensus 239 ~NvPL~~g~~d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~v 317 (339)
+|..+. |.+-.+.+.-|++. +..++||+|+|..|. |...+.+. .+.+.+..--+.+.+.++..+.+++++
T Consensus 54 iN~Gi~-G~tt~~~l~r~~~~----v~~~~Pd~vvi~~G~ND~~~~~~~----~~~~~~~~~l~~ii~~~~~~~~~iil~ 124 (209)
T 4hf7_A 54 IGRGIS-GQTSYQFLLRFRED----VINLSPALVVINAGTNDVAENTGA----YNEDYTFGNIASMAELAKANKIKVILT 124 (209)
T ss_dssp EEEECT-TCCHHHHHHHHHHH----TGGGCCSEEEECCCHHHHTTSSSS----CCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEeccC-cccHHHHHHHHHHH----HHhcCCCEEEEEeCCCcCcccccc----ccHHHHHHHHHHhhHHHhccCceEEEE
Confidence 344443 22334445545443 245799999999998 76544332 234444443444556666667776654
No 19
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=74.01 E-value=4.7 Score=34.73 Aligned_cols=45 Identities=16% Similarity=0.265 Sum_probs=30.4
Q ss_pred HhhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhC--CCCEEEE
Q 019524 264 GHTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSR--NIPIVML 317 (339)
Q Consensus 264 ~~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~--~~p~v~v 317 (339)
+...+||+|||..|. |.. .+.+.|..-.+.+++.+++. +.+++++
T Consensus 89 l~~~~pd~vvi~~G~ND~~---------~~~~~~~~~l~~~i~~l~~~~p~~~ii~~ 136 (232)
T 1es9_A 89 LEHIRPKIVVVWVGTNNHG---------HTAEQVTGGIKAIVQLVNERQPQARVVVL 136 (232)
T ss_dssp TTTCCCSEEEEECCTTCTT---------SCHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred cccCCCCEEEEEeecCCCC---------CCHHHHHHHHHHHHHHHHHHCCCCeEEEe
Confidence 356799999999997 443 56777776666666666554 4455554
No 20
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=73.07 E-value=3.6 Score=34.98 Aligned_cols=66 Identities=17% Similarity=0.268 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCEEEEEcCC-CCC-CCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 249 TNEYLKKLDEALEVAGHTFDPELVIYNAGT-DIL-EGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 249 d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~-D~~-~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
-.+.+..++.-+.+.+...+||+|+|+.|. |.. ..+ ....+.+.|..--+.+++.+++. .+++++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~---~~~~~~~~~~~~l~~li~~l~~~-~~iil~~ 136 (218)
T 1vjg_A 69 SSDIAKRWLQEVSLRLHKEYNSLVVFSFGLNDTTLENG---KPRVSIAETIKNTREILTQAKKL-YPVLMIS 136 (218)
T ss_dssp HHHHHHHHHHHHHTTCCTTSEEEEEEECCHHHHCEETT---EESSCHHHHHHHHHHHHHHHHHH-SCEEEEC
T ss_pred HHHHHHHhHHhhhhhhccCCCCEEEEEecCCcchhhcc---cccCCHHHHHHHHHHHHHHHHHh-CcEEEEC
Confidence 344444444322211123599999999998 554 111 22456777776666666666555 6777664
No 21
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=72.85 E-value=15 Score=29.87 Aligned_cols=61 Identities=20% Similarity=0.170 Sum_probs=37.0
Q ss_pred CChHHHHHHHHHHHHHHHhhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 247 TTTNEYLKKLDEALEVAGHTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 247 ~~d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
.+-.+.+..+++ .+...+||+||++.|. |.. .....+.+.|..--+.+++.++ +.+++++.
T Consensus 50 ~~~~~~~~~~~~----~~~~~~pd~vvi~~G~ND~~-----~~~~~~~~~~~~~l~~~i~~~~--~~~vi~~~ 111 (195)
T 1yzf_A 50 DTTEDGLKRLNK----EVLIEKPDEVVIFFGANDAS-----LDRNITVATFRENLETMIHEIG--SEKVILIT 111 (195)
T ss_dssp CCHHHHHHHHHH----HTGGGCCSEEEEECCTTTTC-----TTSCCCHHHHHHHHHHHHHHHC--GGGEEEEC
T ss_pred CCHHHHHHHHHH----hhhhcCCCEEEEEeeccccC-----ccCCCCHHHHHHHHHHHHHHhc--CCEEEEEc
Confidence 333444444443 3356899999999997 443 1224677777766555666555 55666554
No 22
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=71.70 E-value=7.7 Score=36.84 Aligned_cols=53 Identities=15% Similarity=0.198 Sum_probs=37.8
Q ss_pred HHHHHhhcCC-CEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEE
Q 019524 260 LEVAGHTFDP-ELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVML 317 (339)
Q Consensus 260 l~p~~~~f~P-dlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~v 317 (339)
+.+++.+++| |+|||+.|. |...+ ...+.+.|..--+.+++.+++.+.+++++
T Consensus 221 l~~~l~~~~p~d~VvI~~G~ND~~~~-----~~~~~~~~~~~l~~ii~~lr~~~a~vilv 275 (375)
T 2o14_A 221 LEAILKYIKPGDYFMLQLGINDTNPK-----HKESEAEFKEVMRDMIRQVKAKGADVILS 275 (375)
T ss_dssp HHHHHTTCCTTCEEEEECCTGGGCGG-----GCCCHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHhCCCCCEEEEEEEccCCCcc-----CCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 3455678899 999999998 55442 23467788877777777777777666655
No 23
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=71.27 E-value=12 Score=32.24 Aligned_cols=44 Identities=18% Similarity=0.111 Sum_probs=31.0
Q ss_pred HHhhcCC-CEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhC
Q 019524 263 AGHTFDP-ELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSR 310 (339)
Q Consensus 263 ~~~~f~P-dlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~ 310 (339)
.+..++| |+|||..|. +|-......+.+.|..--+.+++.+++.
T Consensus 95 ~l~~~~p~d~VvI~~Gt----ND~~~~~~~~~~~~~~~l~~li~~ir~~ 139 (232)
T 3dci_A 95 ALSCHMPLDLVIIMLGT----NDIKPVHGGRAEAAVSGMRRLAQIVETF 139 (232)
T ss_dssp HHHHHCSCSEEEEECCT----TTTSGGGTSSHHHHHHHHHHHHHHHHHC
T ss_pred HHhhCCCCCEEEEEecc----CCCccccCCCHHHHHHHHHHHHHHHHHh
Confidence 4466799 999999997 3323233457888887777777777764
No 24
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=67.60 E-value=7.2 Score=33.52 Aligned_cols=45 Identities=18% Similarity=0.331 Sum_probs=30.4
Q ss_pred HhhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhC--CCCEEEE
Q 019524 264 GHTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSR--NIPIVML 317 (339)
Q Consensus 264 ~~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~--~~p~v~v 317 (339)
+..++||+|+|..|. |. | .+.+.|..--+.+++.+++. +.+++++
T Consensus 90 l~~~~pd~vvi~~G~ND~------~---~~~~~~~~~l~~~i~~l~~~~p~~~iil~ 137 (229)
T 1fxw_F 90 LENIKPKVIVVWVGTNNH------E---NTAEEVAGGIEAIVQLINTRQPQAKIIVL 137 (229)
T ss_dssp TSSCCCSEEEEECCTTCT------T---SCHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred cccCCCCEEEEEEecCCC------C---CCHHHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 356799999999997 54 2 56777776666666666554 4555554
No 25
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=61.57 E-value=26 Score=29.05 Aligned_cols=11 Identities=18% Similarity=0.407 Sum_probs=9.5
Q ss_pred cCCCeEEEEecc
Q 019524 188 LNISRVMIIDLD 199 (339)
Q Consensus 188 ~~~~RV~IiD~D 199 (339)
.| +||++||+|
T Consensus 29 ~g-~~vlliD~D 39 (206)
T 4dzz_A 29 SG-YNIAVVDTD 39 (206)
T ss_dssp TT-CCEEEEECC
T ss_pred CC-CeEEEEECC
Confidence 34 699999999
No 26
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=59.57 E-value=9.7 Score=34.65 Aligned_cols=54 Identities=17% Similarity=0.305 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEE
Q 019524 250 NEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIV 315 (339)
Q Consensus 250 ~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v 315 (339)
..+...+.+.|..++++++||+|+.-.|.|.|-+ .....+.+.+.++..+.|++
T Consensus 130 ~~~~~~l~~~l~~~ir~~~PdvV~t~~~~d~HpD------------H~~~~~a~~~A~~~~~~~~~ 183 (273)
T 3dff_A 130 HDLVGEVADDIRSIIDEFDPTLVVTCAAIGEHPD------------HEATRDAALFATHEKNVPVR 183 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEECCTTCCHH------------HHHHHHHHHHHHHHHTCCEE
T ss_pred cchHHHHHHHHHHHHHHcCCCEEEECCCCCCChH------------HHHHHHHHHHHHHHcCCCEE
Confidence 3456667777788889999999999888776643 34444445445554566654
No 27
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=58.41 E-value=6.2 Score=33.81 Aligned_cols=52 Identities=13% Similarity=0.191 Sum_probs=32.3
Q ss_pred cCCCEEEEEcCC-CCCCCCCCCCCc-cCHHHHHHHHHHHHHHHhhC--CCCEEEEe
Q 019524 267 FDPELVIYNAGT-DILEGDPLGMLK-ISPDGIAARDEKTFRFARSR--NIPIVMLT 318 (339)
Q Consensus 267 f~PdlIvvsaG~-D~~~~Dplg~~~-lt~~g~~~~~~~l~~~a~~~--~~p~v~vl 318 (339)
.+||+|+|..|. |...+-|.+.+. .+.+.|..--+.+++.+++. +.+++++.
T Consensus 81 ~~pd~Vii~~G~ND~~~~~~~~~~~~~~~~~f~~~l~~li~~l~~~~P~~~iil~~ 136 (232)
T 3dc7_A 81 EDADFIAVFGGVNDYGRDQPLGQYGDCDMTTFYGALMMLLTGLQTNWPTVPKLFIS 136 (232)
T ss_dssp TTCSEEEEECCHHHHHTTCCCCCTTCCSTTSHHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred CCCCEEEEEEeccccccCcCCccccccchHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 499999999998 777766766553 23333443333344444443 67777654
No 28
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=58.11 E-value=11 Score=34.13 Aligned_cols=54 Identities=24% Similarity=0.326 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEE
Q 019524 250 NEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIV 315 (339)
Q Consensus 250 ~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v 315 (339)
+.+...+.+.|..++++++||+|+.-.|.|.|-+- ....+.+.+.++..+.|+.
T Consensus 127 ~~~~~~~~~~l~~~ir~~~PdvV~t~~~~d~HpDH------------~~~~~a~~~A~~~~~~~~~ 180 (270)
T 3dfi_A 127 HDLVAAIREDIESMIAECDPTLVLTCVAIGKHPDH------------KATRDATLLAARERGIPLR 180 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEECCTTCCHHH------------HHHHHHHHHHHHHTTCCEE
T ss_pred cchHHHHHHHHHHHHHHcCCCEEEeCCCCCCChhH------------HHHHHHHHHHHHHcCCCee
Confidence 34556677777888899999999998887766443 4444445555555566654
No 29
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=57.55 E-value=19 Score=34.69 Aligned_cols=51 Identities=25% Similarity=0.234 Sum_probs=36.1
Q ss_pred HHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccC---------HHHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKIS---------PDGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 259 ~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt---------~~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
.+..+.++.+|++||| |++..+... .+...++.+.|..+|+++++|++++-
T Consensus 301 ~~~~l~~~~~~~lIvI---------D~l~~~~~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~ls 360 (444)
T 2q6t_A 301 RARRLVSQNQVGLIII---------DYLQLMSGPGSGKSGENRQQEIAAISRGLKALARELGIPIIALS 360 (444)
T ss_dssp HHHHHHHHSCCCEEEE---------ECGGGCBCC-------CHHHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHcCCCEEEE---------cChhhcCCCcCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 3444556789999998 444333321 34567788889999999999999874
No 30
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=54.51 E-value=27 Score=33.93 Aligned_cols=51 Identities=16% Similarity=0.234 Sum_probs=36.2
Q ss_pred HHHHHHhhcCCC--EEEEEcCCCCCCCCCCCCCcc------CHHHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 259 ALEVAGHTFDPE--LVIYNAGTDILEGDPLGMLKI------SPDGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 259 ~l~p~~~~f~Pd--lIvvsaG~D~~~~Dplg~~~l------t~~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
.+..+.++++|+ +||| |++..|.. ..+...++.+.|..+|+++++|++++-
T Consensus 299 ~ir~l~~~~~~~~~lIVI---------D~Lq~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~ls 357 (444)
T 3bgw_A 299 KTRQTKRKNPGKRVIVMI---------DYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALS 357 (444)
T ss_dssp HHHHHHHHSCSSCEEEEE---------ECSTTSBCSCSSSCHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHhCCCCeEEEE---------ecHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 344455678999 9998 44443332 134567788899999999999988874
No 31
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=54.38 E-value=7.7 Score=36.61 Aligned_cols=55 Identities=22% Similarity=0.270 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhhc-CCCEEEEEcCCCCCCCCCCCCCccCH------HHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 255 KLDEALEVAGHTF-DPELVIYNAGTDILEGDPLGMLKISP------DGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 255 a~~~~l~p~~~~f-~PdlIvvsaG~D~~~~Dplg~~~lt~------~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
.+...+..+.+++ ++++||| |.+..|.... ....++.+.|..+|+++++||+++-
T Consensus 142 ~i~~~ir~l~~~~gg~~lIVI---------DyLqlm~~~~~~~~r~~ei~~isr~LK~lAkel~vpVi~ls 203 (338)
T 4a1f_A 142 QIRLQLRKLKSQHKELGIAFI---------DYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIALV 203 (338)
T ss_dssp HHHHHHHHHHHHCTTEEEEEE---------EEEECCCTHHHHHHCCCCHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEE---------echHHhcCCCCCCChHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 3444455566778 8999998 5555554322 2366788899999999999998873
No 32
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=54.13 E-value=17 Score=33.39 Aligned_cols=52 Identities=15% Similarity=0.231 Sum_probs=35.8
Q ss_pred HHHHHHHhhcCCC--EEEEEcCCCCCCCCCCCCCcc------CHHHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 258 EALEVAGHTFDPE--LVIYNAGTDILEGDPLGMLKI------SPDGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 258 ~~l~p~~~~f~Pd--lIvvsaG~D~~~~Dplg~~~l------t~~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
..+..+.++++++ +||| |.+..|.. ..+...++.+.|.++|+++++|++++-
T Consensus 169 ~~i~~l~~~~~~~~~lVVI---------D~l~~l~~~~~~~~r~~~i~~~~~~Lk~lAk~~~i~vi~ls 228 (315)
T 3bh0_A 169 SKTRQTKRKNPGKRVIVMI---------DYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALS 228 (315)
T ss_dssp HHHHHHHHTSSSCCEEEEE---------ECGGGSBCSCTTSCHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHhcCCCCeEEEE---------eCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 3444556777888 9988 33322221 135667888899999999999998874
No 33
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=54.05 E-value=13 Score=35.58 Aligned_cols=50 Identities=20% Similarity=0.234 Sum_probs=32.3
Q ss_pred HHHhhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhC--CCCEEEEe
Q 019524 262 VAGHTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSR--NIPIVMLT 318 (339)
Q Consensus 262 p~~~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~--~~p~v~vl 318 (339)
..+.+.+||+|||..|. |...+ ++.+.|..--+.+++.+++. +.||+++.
T Consensus 238 ~~l~~~~pdlVvI~lGtND~~~~-------~~~~~~~~~l~~li~~ir~~~P~a~Illv~ 290 (385)
T 3skv_A 238 RLIRDLPADLISLRVGTSNFMDG-------DGFVDFPANLVGFVQIIRERHPLTPIVLGS 290 (385)
T ss_dssp HHHHHSCCSEEEEEESHHHHTTT-------CCTTTHHHHHHHHHHHHHTTCSSSCEEEEE
T ss_pred HHHhccCCCEEEEEeeccCCCCC-------CCHHHHHHHHHHHHHHHHHHCCCCcEEEEc
Confidence 34466799999999998 65442 34555555555555555554 56776654
No 34
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=53.51 E-value=18 Score=31.31 Aligned_cols=57 Identities=12% Similarity=0.030 Sum_probs=32.4
Q ss_pred HHHHhhcCC-CEEEEEcCC-CCCCCC--CC-CC---------------CccCHHHHHHHHHHHHHHHhhCCCCEEEE
Q 019524 261 EVAGHTFDP-ELVIYNAGT-DILEGD--PL-GM---------------LKISPDGIAARDEKTFRFARSRNIPIVML 317 (339)
Q Consensus 261 ~p~~~~f~P-dlIvvsaG~-D~~~~D--pl-g~---------------~~lt~~g~~~~~~~l~~~a~~~~~p~v~v 317 (339)
..++...+| |+|+|+.|. |+...+ +- +. ...+.+.|.+--+.+.+.+++.+.+++++
T Consensus 55 ~~~l~~~~~~d~ViI~~G~ND~~~~~~~~~r~~~~g~g~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~~vil~ 131 (233)
T 1k7c_A 55 ENIADVVTAGDYVIVEFGHNDGGSLSTDNGRTDCSGTGAEVCYSVYDGVNETILTFPAYLENAAKLFTAKGAKVILS 131 (233)
T ss_dssp HHHHHHCCTTCEEEECCCTTSCSCGGGCCSCCCBSSSSSCEEEEEETTEEEEEEBHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhhCCCCCEEEEEccCCCCCCcCCcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 344455666 999999999 766542 10 10 01223456665555666666666555544
No 35
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=52.43 E-value=8.5 Score=32.22 Aligned_cols=46 Identities=15% Similarity=0.078 Sum_probs=31.4
Q ss_pred hhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCC--CCEEEE
Q 019524 265 HTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSRN--IPIVML 317 (339)
Q Consensus 265 ~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~--~p~v~v 317 (339)
...+||+|+|+.|. |... ..+.+.|..--+.+++.+++.+ .+++++
T Consensus 82 ~~~~pd~vvi~~G~ND~~~-------~~~~~~~~~~l~~~i~~l~~~~p~~~iil~ 130 (214)
T 2hsj_A 82 YGGAVDKIFLLIGTNDIGK-------DVPVNEALNNLEAIIQSVARDYPLTEIKLL 130 (214)
T ss_dssp CCSCCCEEEEECCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HhcCCCEEEEEEecCcCCc-------CCCHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 46799999999997 5543 3467777766666666666654 455554
No 36
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=51.29 E-value=14 Score=32.48 Aligned_cols=24 Identities=8% Similarity=0.300 Sum_probs=17.2
Q ss_pred HcCCCeEEEEeccCcCCcchhhhhcC
Q 019524 187 QLNISRVMIIDLDAHQGNGHEKDFSS 212 (339)
Q Consensus 187 ~~~~~RV~IiD~DvHHGnGTq~if~~ 212 (339)
+.| +||++||+|. +|+.+...+..
T Consensus 27 ~~G-~~VlliD~D~-q~~~~~~~~~~ 50 (269)
T 1cp2_A 27 AMG-KTIMVVGCDP-KADSTRLLLGG 50 (269)
T ss_dssp TTT-CCEEEEEECT-TSCSSHHHHTS
T ss_pred HCC-CcEEEEcCCC-CCCHHHHhcCC
Confidence 335 6999999996 56677666643
No 37
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=50.85 E-value=26 Score=34.27 Aligned_cols=55 Identities=16% Similarity=0.147 Sum_probs=34.0
Q ss_pred HHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEE
Q 019524 260 LEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVML 317 (339)
Q Consensus 260 l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~v 317 (339)
+..+.++++|++|||- ........ ..-.-..+...++.+.|.++|++++++++++
T Consensus 346 i~~~~~~~~~~lvVID-~l~~l~~~--~~~~~~~~~~~~~~~~Lk~lak~~~i~vi~~ 400 (503)
T 1q57_A 346 LAYMRSGLGCDVIILD-HISIVVSA--SGESDERKMIDNLMTKLKGFAKSTGVVLVVI 400 (503)
T ss_dssp HHHHHHTTCCSEEEEE-CTTCCCSC--CSCCCHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHhcCCCEEEEc-cchhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHCCeEEEE
Confidence 3445577899999983 12222111 0000122455677888999999999998887
No 38
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=48.93 E-value=14 Score=31.58 Aligned_cols=19 Identities=21% Similarity=0.218 Sum_probs=14.7
Q ss_pred HcCCCeEEEEeccCcCCcch
Q 019524 187 QLNISRVMIIDLDAHQGNGH 206 (339)
Q Consensus 187 ~~~~~RV~IiD~DvHHGnGT 206 (339)
+.| +||++||+|..+||=+
T Consensus 29 ~~g-~~VlliD~D~~~~~l~ 47 (237)
T 1g3q_A 29 DRG-RKVLAVDGDLTMANLS 47 (237)
T ss_dssp HTT-CCEEEEECCTTSCCHH
T ss_pred hcC-CeEEEEeCCCCCCChh
Confidence 334 6999999999887643
No 39
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=48.03 E-value=60 Score=29.60 Aligned_cols=62 Identities=26% Similarity=0.337 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEcCCC-CCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCC
Q 019524 250 NEYLKKLDEALEVAGHTFDPELVIYNAGTD-ILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPI 322 (339)
Q Consensus 250 ~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D-~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY 322 (339)
++...+|++++.-+ ++.+||+||+ +| | ..- .-..+.+.+..+.+.+.++... +|++++ -|.-
T Consensus 44 ~~~~~~l~~lv~~~-~~~~~D~vli-aG-D~l~d-----~~~~~~~~~~~~~~~l~~L~~~--~pv~~i-~GNH 106 (336)
T 2q8u_A 44 EELKKALDKVVEEA-EKREVDLILL-TG-DLLHS-----RNNPSVVALHDLLDYLKRMMRT--APVVVL-PGNH 106 (336)
T ss_dssp HHHHHHHHHHHHHH-HHHTCSEEEE-ES-CSBSC-----SSCCCHHHHHHHHHHHHHHHHH--SCEEEC-CC--
T ss_pred HHHHHHHHHHHHHH-HHhCCCEEEE-CC-ccccC-----CCCCCHHHHHHHHHHHHHHHhc--CCEEEE-CCCC
Confidence 45667888877655 6779998876 44 4 221 1123445444445555555433 676654 4444
No 40
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=47.72 E-value=15 Score=32.06 Aligned_cols=19 Identities=37% Similarity=0.403 Sum_probs=14.8
Q ss_pred HcCCCeEEEEeccCcCCcch
Q 019524 187 QLNISRVMIIDLDAHQGNGH 206 (339)
Q Consensus 187 ~~~~~RV~IiD~DvHHGnGT 206 (339)
+.| +||++||+|..+||=+
T Consensus 29 ~~g-~~VlliD~D~~~~~l~ 47 (263)
T 1hyq_A 29 QLG-HDVTIVDADITMANLE 47 (263)
T ss_dssp HTT-CCEEEEECCCSSSSHH
T ss_pred hCC-CcEEEEECCCCCCCcc
Confidence 335 6999999999887643
No 41
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=47.40 E-value=15 Score=34.52 Aligned_cols=23 Identities=22% Similarity=0.322 Sum_probs=17.7
Q ss_pred HcCCCeEEEEeccCcCCcchhhhhc
Q 019524 187 QLNISRVMIIDLDAHQGNGHEKDFS 211 (339)
Q Consensus 187 ~~~~~RV~IiD~DvHHGnGTq~if~ 211 (339)
+.| +||++||+|.. ||.+..++.
T Consensus 28 ~~G-~rVLlID~D~q-~~~~~~l~~ 50 (361)
T 3pg5_A 28 LQG-KRVLYVDCDPQ-CNATQLMLT 50 (361)
T ss_dssp HTT-CCEEEEECCTT-CTTHHHHSC
T ss_pred hCC-CcEEEEEcCCC-CChhhhhcC
Confidence 345 69999999977 788777653
No 42
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=47.22 E-value=16 Score=31.75 Aligned_cols=20 Identities=20% Similarity=0.187 Sum_probs=15.3
Q ss_pred HcCCCeEEEEeccCcCCcchh
Q 019524 187 QLNISRVMIIDLDAHQGNGHE 207 (339)
Q Consensus 187 ~~~~~RV~IiD~DvHHGnGTq 207 (339)
+.| +||++||+|..+||=+.
T Consensus 29 ~~g-~~VlliD~D~~~~~~~~ 48 (260)
T 3q9l_A 29 QKG-KKTVVIDFAIGLRNLDL 48 (260)
T ss_dssp HTT-CCEEEEECCCSSCCHHH
T ss_pred hCC-CcEEEEECCCCCCChhH
Confidence 345 69999999998876444
No 43
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=47.06 E-value=18 Score=32.24 Aligned_cols=23 Identities=17% Similarity=0.375 Sum_probs=16.5
Q ss_pred HcCCCeEEEEeccCcCCcchhhhhc
Q 019524 187 QLNISRVMIIDLDAHQGNGHEKDFS 211 (339)
Q Consensus 187 ~~~~~RV~IiD~DvHHGnGTq~if~ 211 (339)
+.| +||++||+|.. ++.+..++.
T Consensus 28 ~~G-~rVlliD~D~q-~~~~~~~~~ 50 (289)
T 2afh_E 28 EMG-KKVMIVGCDPK-ADSTRLILH 50 (289)
T ss_dssp HTT-CCEEEEEECSS-SCSSHHHHC
T ss_pred HCC-CeEEEEecCCC-CCHHHHhcC
Confidence 335 69999999974 566666554
No 44
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=46.99 E-value=19 Score=30.83 Aligned_cols=19 Identities=16% Similarity=0.127 Sum_probs=15.6
Q ss_pred CeEEEEeccCcCCcchhhh
Q 019524 191 SRVMIIDLDAHQGNGHEKD 209 (339)
Q Consensus 191 ~RV~IiD~DvHHGnGTq~i 209 (339)
+||++||+|...||=+..+
T Consensus 35 ~~VlliD~D~~~~~l~~~~ 53 (245)
T 3ea0_A 35 IHVLAVDISLPFGDLDMYL 53 (245)
T ss_dssp CCEEEEECCTTTCCGGGGT
T ss_pred CCEEEEECCCCCCCHHHHh
Confidence 6999999999988766544
No 45
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=46.94 E-value=54 Score=30.68 Aligned_cols=67 Identities=12% Similarity=0.046 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHhhcC--CCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCC-EEEEeCCCCCh
Q 019524 251 EYLKKLDEALEVAGHTFD--PELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIP-IVMLTSGPITS 324 (339)
Q Consensus 251 ~yl~a~~~~l~p~~~~f~--PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p-~v~vleGGY~~ 324 (339)
.+...+.+.+..++++|+ |+.|++..+ +.|.+ +.+...+....+.+.+..++.+.. +|+|.+.+|+.
T Consensus 117 ~~~~~~~~~w~~iA~ryk~~~~~Vi~el~-----NEP~~--~~~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g~~w~~ 186 (345)
T 3jug_A 117 SDLDRAVDYWIEMKDALIGKEDTVIINIA-----NEWYG--SWDGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQ 186 (345)
T ss_dssp HHHHHHHHHHHHTHHHHTTCTTTEEEECC-----TTCCC--SSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCCeEEEEec-----CCCCC--CCCHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCccc
Confidence 345566666666777774 456667766 88887 345667776667777777777543 55555556744
No 46
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=46.54 E-value=88 Score=28.50 Aligned_cols=61 Identities=20% Similarity=0.343 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeC
Q 019524 250 NEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTS 319 (339)
Q Consensus 250 ~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vle 319 (339)
+++..+|++++.-+ .+.+||+||+ +| |..-. -.-+.+.+....+.+.++. +.++|++++.|
T Consensus 23 ~~~~~~~~~~~~~~-~~~~~D~vl~-~G-Dl~d~-----~~~~~~~~~~~~~~l~~l~-~~~~~v~~v~G 83 (333)
T 1ii7_A 23 EEFAEAFKNALEIA-VQENVDFILI-AG-DLFHS-----SRPSPGTLKKAIALLQIPK-EHSIPVFAIEG 83 (333)
T ss_dssp HHHHHHHHHHHHHH-HHTTCSEEEE-ES-CSBSS-----SSCCHHHHHHHHHHHHHHH-TTTCCEEEECC
T ss_pred HHHHHHHHHHHHHH-HhcCCCEEEE-CC-CcCCC-----CCCCHHHHHHHHHHHHHHH-HCCCcEEEeCC
Confidence 45667788777644 7789998876 44 32211 1223445555444444433 34678766643
No 47
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=44.51 E-value=41 Score=32.43 Aligned_cols=53 Identities=9% Similarity=0.199 Sum_probs=36.7
Q ss_pred HHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCc-------cCHHHHHHHHHHHHHHHhhCCCCEEEEeC
Q 019524 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLK-------ISPDGIAARDEKTFRFARSRNIPIVMLTS 319 (339)
Q Consensus 258 ~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~-------lt~~g~~~~~~~l~~~a~~~~~p~v~vle 319 (339)
..+..+.++.+|++|||- .+..+. -..+...++.+.|.++|++.++|++++-.
T Consensus 303 ~~~~~l~~~~~~~livID---------~l~~~~~~~~~~~~~~~~i~~i~~~Lk~lAke~~i~vi~~sq 362 (454)
T 2r6a_A 303 AKCRRLKQESGLGMIVID---------YLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQ 362 (454)
T ss_dssp HHHHHHHTTTCCCEEEEE---------CGGGSCCSCC----CHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEc---------cHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 344445567899999982 222221 13556778888899999999999998854
No 48
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=44.34 E-value=1e+02 Score=25.90 Aligned_cols=66 Identities=12% Similarity=0.097 Sum_probs=40.1
Q ss_pred CCCCChHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHH-HHHHHHHHHHHHHhhCCCCEEEE
Q 019524 244 VSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPD-GIAARDEKTFRFARSRNIPIVML 317 (339)
Q Consensus 244 ~~g~~d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~-g~~~~~~~l~~~a~~~~~p~v~v 317 (339)
+++....+=+..+.+-+..++++|+||.+.| ++++-.-|.++. ...+.--.++-.+.+.++|+.-.
T Consensus 39 ~~~~~~~~RL~~I~~~l~~~i~~~~Pd~vai--------E~~F~~~n~~sal~lgqarGv~~la~~~~glpv~ey 105 (166)
T 4ep4_A 39 SPQEPAKERVGRIHARVLEVLHRFRPEAVAV--------EEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAY 105 (166)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHCCSEEEE--------ECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhCCCEEEE--------eehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 3444556666777777888999999999998 555544444322 22222222333445568888653
No 49
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=43.77 E-value=15 Score=31.38 Aligned_cols=20 Identities=10% Similarity=0.059 Sum_probs=14.3
Q ss_pred HHHcCCCeEEEEeccCcCCcch
Q 019524 185 FVQLNISRVMIIDLDAHQGNGH 206 (339)
Q Consensus 185 ~~~~~~~RV~IiD~DvHHGnGT 206 (339)
+.+.| +||++||+|.. ||=+
T Consensus 24 la~~g-~~VlliD~D~~-~~l~ 43 (254)
T 3kjh_A 24 MASDY-DKIYAVDGDPD-SCLG 43 (254)
T ss_dssp HTTTC-SCEEEEEECTT-SCHH
T ss_pred HHHCC-CeEEEEeCCCC-cChH
Confidence 33445 79999999995 5533
No 50
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=41.68 E-value=19 Score=31.56 Aligned_cols=15 Identities=53% Similarity=0.975 Sum_probs=12.4
Q ss_pred CeEEEEeccCcCCcch
Q 019524 191 SRVMIIDLDAHQGNGH 206 (339)
Q Consensus 191 ~RV~IiD~DvHHGnGT 206 (339)
+||++||+|. +||-+
T Consensus 36 ~~VlliD~D~-~~~~~ 50 (257)
T 1wcv_1 36 KRVLLVDLDP-QGNAT 50 (257)
T ss_dssp CCEEEEECCT-TCHHH
T ss_pred CCEEEEECCC-CcCHH
Confidence 6999999998 47654
No 51
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=41.44 E-value=35 Score=28.64 Aligned_cols=47 Identities=19% Similarity=0.410 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHH
Q 019524 249 TNEYLKKLDEALEVAGHTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTF 304 (339)
Q Consensus 249 d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~ 304 (339)
-.+.+..++..+ ...+||+|+|..|. |...+. ..+.+.|..+.+.+.
T Consensus 68 ~~~~~~~l~~~l----~~~~pd~vvi~~G~ND~~~~~-----~~~~~~l~~li~~i~ 115 (215)
T 2vpt_A 68 IPQIASNINNWL----NTHNPDVVFLWIGGNDLLLNG-----NLNATGLSNLIDQIF 115 (215)
T ss_dssp HHHHHHHHHHHH----HHHCCSEEEEECCHHHHHHHC-----CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh----hccCCCEEEEEccccccCCCC-----ChhHHHHHHHHHHHH
Confidence 344555554433 45799999999998 554322 234566666555543
No 52
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=41.29 E-value=1.3e+02 Score=26.42 Aligned_cols=70 Identities=17% Similarity=0.174 Sum_probs=35.7
Q ss_pred CChHHHHHHHHHHHHHHHhhcCCCEEEE-------EcCCCCCCCCCCCCCccCHHHHHHH-HHHHHHHHhhCCCCEEEEe
Q 019524 247 TTTNEYLKKLDEALEVAGHTFDPELVIY-------NAGTDILEGDPLGMLKISPDGIAAR-DEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 247 ~~d~~yl~a~~~~l~p~~~~f~PdlIvv-------saG~D~~~~Dplg~~~lt~~g~~~~-~~~l~~~a~~~~~p~v~vl 318 (339)
.=+.+.+..+.+.+..+-++-+...||+ ++|.|.-.-. ... ..+.+... ...++.....+..|+|+..
T Consensus 26 al~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~---~~~-~~~~~~~~~~~~~~~~l~~~~kPvIAav 101 (257)
T 2ej5_A 26 AFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVT---EEM-DHGDVLRSRYAPMMKALHHLEKPVVAAV 101 (257)
T ss_dssp CBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-----------CHHHHHHHTHHHHHHHHHHCCSCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHh---hcc-chhHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 3355677777777776644444456776 3466653211 111 12333321 2233444456789998866
Q ss_pred CC
Q 019524 319 SG 320 (339)
Q Consensus 319 eG 320 (339)
.|
T Consensus 102 ~G 103 (257)
T 2ej5_A 102 NG 103 (257)
T ss_dssp CS
T ss_pred Cc
Confidence 54
No 53
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=41.18 E-value=1e+02 Score=28.02 Aligned_cols=62 Identities=19% Similarity=0.182 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCC
Q 019524 250 NEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPI 322 (339)
Q Consensus 250 ~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY 322 (339)
.++...|.+.+ |.+++|+-..|||-.|-.+..++ +-...+.+.+..+. +.|.++|+|.+||-
T Consensus 8 ~~~~~~~~~a~-pyi~~~~~k~iVIKlGGs~l~~~---------~~~~~~~~~i~~l~-~~G~~vVlVhGgG~ 69 (300)
T 2buf_A 8 AQVAKVLSEAL-PYIRRFVGKTLVIKYGGNAMESE---------ELKAGFARDVVLMK-AVGINPVVVHGGGP 69 (300)
T ss_dssp HHHHHHHHHHH-HHHHHHTTCEEEEEECCTTTTSS---------HHHHHHHHHHHHHH-HTTCEEEEEECCCH
T ss_pred HHHHHHHHHHh-HHHHHhcCCeEEEEECchhhCCc---------hHHHHHHHHHHHHH-HCCCeEEEEECCcH
Confidence 36778888875 56699999999999997776543 33445555555443 35778999999975
No 54
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=40.45 E-value=28 Score=32.06 Aligned_cols=48 Identities=17% Similarity=0.216 Sum_probs=29.7
Q ss_pred hhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhC--CCCEEEEe
Q 019524 265 HTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSR--NIPIVMLT 318 (339)
Q Consensus 265 ~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~--~~p~v~vl 318 (339)
..++||+|||..|. |..... .+.+.|..--+.+++.+++. +.+++++.
T Consensus 210 ~~~~PdlVvI~lGtND~~~~~------~~~~~~~~~l~~li~~ir~~~p~a~Iil~~ 260 (341)
T 2wao_A 210 SKYVPQVVVINLGTNDFSTSF------ADKTKFVTAYKNLISEVRRNYPDAHIFCCV 260 (341)
T ss_dssp GGCCCSEEEEECCHHHHSSSC------CCHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred cCCCCCEEEEeCccccCCCCC------CCHHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 46899999999998 765543 24455555444444544443 45566554
No 55
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=39.99 E-value=26 Score=28.96 Aligned_cols=56 Identities=11% Similarity=0.139 Sum_probs=31.9
Q ss_pred HHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHH-HHHhhCCCCEEEEeCCCC
Q 019524 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTF-RFARSRNIPIVMLTSGPI 322 (339)
Q Consensus 258 ~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~-~~a~~~~~p~v~vleGGY 322 (339)
+.|..++++|+|+.|+| +.|+ .++-|..--....+.+. .++...++|+..+=|=+=
T Consensus 45 ~~l~~li~~~~~~~ivV--------GlP~-~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 45 SRLSELIKDYTIDKIVL--------GFPK-NMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp HHHHHHHTTSEEEEEEE--------ECCC-CBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred HHHHHHHHHcCCCEEEE--------eeee-cCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 34556779999999998 6665 33333322222222222 333345899998766543
No 56
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=39.93 E-value=20 Score=33.30 Aligned_cols=47 Identities=23% Similarity=0.323 Sum_probs=28.9
Q ss_pred hhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhC--CCCEEEE
Q 019524 265 HTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSR--NIPIVML 317 (339)
Q Consensus 265 ~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~--~~p~v~v 317 (339)
..++||+|||..|. |..... .+.+.|..--+.+++.+++. +.+++++
T Consensus 222 ~~~~Pd~VvI~lG~ND~~~~~------~~~~~~~~~l~~li~~ir~~~p~~~I~l~ 271 (347)
T 2waa_A 222 HRYQPDLIISAIGTNDFSPGI------PDRATYINTYTRFVRTLLDNHPQATIVLT 271 (347)
T ss_dssp GGCCCSEEEECCCHHHHSSSC------CCHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ccCCCCEEEEEccccCCCCCC------CcHHHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 36799999999998 665443 34455655545555555553 3455444
No 57
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=39.87 E-value=91 Score=29.22 Aligned_cols=64 Identities=25% Similarity=0.361 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCC
Q 019524 249 TNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPI 322 (339)
Q Consensus 249 d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY 322 (339)
.++...+|++++. .+++.+||+||+ +| |... -.-..+.+.+..+.+.+.++... +|++++ .|.-
T Consensus 25 ~~~~~~~l~~l~~-~~~~~~~D~vli-aG-Dl~h----d~~~~~~~~~~~~~~~l~~l~~~--~~v~~i-~GNH 88 (379)
T 3tho_B 25 REELKKALDKVVE-EAEKREVDLILL-TG-DLLH----SRNNPSVVALHDLLDYLKRMMRT--APVVVL-PGNQ 88 (379)
T ss_dssp HHHHHHHHHHHHH-HHHHHTCSEEEE-CS-CCBS----CSSSCCHHHHHHHHHHHHHHHHH--SCEEEC-CCTT
T ss_pred hHHHHHHHHHHHH-HHHhcCCCEEEE-CC-Cccc----cCCCCCHHHHHHHHHHHHHHHhC--CCEEEE-cCCC
Confidence 3556777877665 447889999987 44 3221 22234566677666666666543 676554 4544
No 58
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=38.92 E-value=1.9e+02 Score=25.59 Aligned_cols=75 Identities=15% Similarity=0.062 Sum_probs=39.5
Q ss_pred CCChHHHHHHHHHHHHHHHhhcCCCEEEE-------EcCCCCCCCCCCCC-CccCHHHHHH---HHHHHHHHHhhCCCCE
Q 019524 246 GTTTNEYLKKLDEALEVAGHTFDPELVIY-------NAGTDILEGDPLGM-LKISPDGIAA---RDEKTFRFARSRNIPI 314 (339)
Q Consensus 246 g~~d~~yl~a~~~~l~p~~~~f~PdlIvv-------saG~D~~~~Dplg~-~~lt~~g~~~---~~~~l~~~a~~~~~p~ 314 (339)
+.=+.+.+..|.+.+..+-++-+...||+ ++|.|...-..... -.-+.+.+.. ....++.....+..|+
T Consensus 28 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv 107 (263)
T 3l3s_A 28 HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEACSALMLDLAHCPKPT 107 (263)
T ss_dssp CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSHHHHHHHHHHHHHHHHHHHTCSSCE
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccccHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 44467778888888876644333445655 67777755432210 0112222222 2233344445578899
Q ss_pred EEEeCC
Q 019524 315 VMLTSG 320 (339)
Q Consensus 315 v~vleG 320 (339)
|+...|
T Consensus 108 IAav~G 113 (263)
T 3l3s_A 108 IALVEG 113 (263)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 886654
No 59
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=38.87 E-value=91 Score=29.19 Aligned_cols=61 Identities=11% Similarity=0.283 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeC
Q 019524 250 NEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTS 319 (339)
Q Consensus 250 ~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vle 319 (339)
.+...+|++++..+ .+-+||+||+ +| |.. ..-.-+.+.+..+.+.+.++. +.++|+++|.|
T Consensus 43 ~~~~~~l~~~v~~~-~~~~~D~Vli-aG-Dl~-----d~~~p~~~~~~~~~~~l~~L~-~~~~pv~~v~G 103 (386)
T 3av0_A 43 KDIYDSFKLCIKKI-LEIKPDVVLH-SG-DLF-----NDLRPPVKALRIAMQAFKKLH-ENNIKVYIVAG 103 (386)
T ss_dssp HHHHHHHHHHHHHH-HTTCCSEEEE-CS-CSB-----SSSSCCHHHHHHHHHHHHHHH-HTTCEEEECCC
T ss_pred HHHHHHHHHHHHHH-HHcCCCEEEE-CC-CCC-----CCCCCCHHHHHHHHHHHHHHH-hcCCcEEEEcC
Confidence 45567788877655 6779999887 44 322 111233455555555554443 24677766643
No 60
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=38.77 E-value=23 Score=31.75 Aligned_cols=20 Identities=30% Similarity=0.383 Sum_probs=15.4
Q ss_pred HcCCCeEEEEeccCcCCcchh
Q 019524 187 QLNISRVMIIDLDAHQGNGHE 207 (339)
Q Consensus 187 ~~~~~RV~IiD~DvHHGnGTq 207 (339)
+.| +||++||+|..+|+=+.
T Consensus 31 ~~G-~~VlliD~D~~q~~l~~ 50 (286)
T 2xj4_A 31 YGG-AKVAVIDLDLRQRTSAR 50 (286)
T ss_dssp HTT-CCEEEEECCTTTCHHHH
T ss_pred HCC-CcEEEEECCCCCCCHHH
Confidence 345 69999999998776554
No 61
>3gaa_A Uncharacterized protein TA1441; the protein with unknown function from thermoplasma acidophi structural genomics,PSI, MCSG; 2.70A {Thermoplasma acidophilum}
Probab=38.43 E-value=36 Score=30.48 Aligned_cols=26 Identities=15% Similarity=0.120 Sum_probs=22.7
Q ss_pred chHHHHHHHHHHHcCCCeEEEEeccC
Q 019524 175 ADISLCIHYAFVQLNISRVMIIDLDA 200 (339)
Q Consensus 175 NnvAIAa~~l~~~~~~~RV~IiD~Dv 200 (339)
|=.-+|+.|+.++.+.++|+.||.|-
T Consensus 38 ~vg~lA~~hLi~~l~~~~vg~id~~~ 63 (252)
T 3gaa_A 38 PTGVLAASYIVETLGMHQVAHLISQH 63 (252)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECCCTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEEecCC
Confidence 45578999999999999999999883
No 62
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=38.07 E-value=1.2e+02 Score=27.05 Aligned_cols=74 Identities=18% Similarity=0.175 Sum_probs=35.8
Q ss_pred CChHHHHHHHHHHHHHHHhhcCCCEEEE-------EcCCCCCCC--CCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEE
Q 019524 247 TTTNEYLKKLDEALEVAGHTFDPELVIY-------NAGTDILEG--DPLGMLKISPDGIAARDEKTFRFARSRNIPIVML 317 (339)
Q Consensus 247 ~~d~~yl~a~~~~l~p~~~~f~PdlIvv-------saG~D~~~~--Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~v 317 (339)
.=+.+.+..+.+++..+-++=.-..||+ ++|.|...- ++.+...-....+.+..+.+......+..|+|+.
T Consensus 38 Al~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAa 117 (274)
T 4fzw_C 38 SFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICA 117 (274)
T ss_dssp CBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHHHHHHHTHHHHHHHHHHCSSCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHHHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 3356677778777776644333345665 355555321 1111111011223333333444445678999987
Q ss_pred eCC
Q 019524 318 TSG 320 (339)
Q Consensus 318 leG 320 (339)
..|
T Consensus 118 v~G 120 (274)
T 4fzw_C 118 VNG 120 (274)
T ss_dssp ECS
T ss_pred ECC
Confidence 754
No 63
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=37.73 E-value=27 Score=31.39 Aligned_cols=21 Identities=24% Similarity=0.221 Sum_probs=15.1
Q ss_pred HcCCCeEEEEeccCcCCcchhhh
Q 019524 187 QLNISRVMIIDLDAHQGNGHEKD 209 (339)
Q Consensus 187 ~~~~~RV~IiD~DvHHGnGTq~i 209 (339)
+.| +||++||+|. +||-+..+
T Consensus 67 ~~G-~~VlliD~D~-~~~~~~~l 87 (307)
T 3end_A 67 ILG-KRVLQIGCDP-KHDSTFTL 87 (307)
T ss_dssp HTT-CCEEEEEESS-SCCTTHHH
T ss_pred HCC-CeEEEEeCCC-CCCHHHHh
Confidence 345 6999999998 56666443
No 64
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=35.52 E-value=27 Score=31.71 Aligned_cols=14 Identities=43% Similarity=0.769 Sum_probs=12.3
Q ss_pred CeEEEEeccCcCCc
Q 019524 191 SRVMIIDLDAHQGN 204 (339)
Q Consensus 191 ~RV~IiD~DvHHGn 204 (339)
+||++||.|...++
T Consensus 122 ~rVLLID~D~~~~~ 135 (286)
T 3la6_A 122 KRVLLIDCDMRKGY 135 (286)
T ss_dssp CCEEEEECCTTTCC
T ss_pred CCEEEEeccCCCCC
Confidence 69999999998764
No 65
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Probab=34.50 E-value=48 Score=31.94 Aligned_cols=61 Identities=11% Similarity=0.144 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCC
Q 019524 250 NEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPI 322 (339)
Q Consensus 250 ~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY 322 (339)
.++...|.+++ |.+++|+-..|||-.|-.+..++ ....+.+.+..+ .+.|.++|+|-+||-
T Consensus 25 ~~~~~~~~~~~-~yi~~~~~~~iViK~GG~~l~~~----------~~~~~~~~i~~l-~~~g~~vvlVhggg~ 85 (456)
T 3d2m_A 25 DSFVAHFREAA-PYIRQMRGTTLVAGIDGRLLEGG----------TLNKLAADIGLL-SQLGIRLVLIHGAYH 85 (456)
T ss_dssp CCHHHHHHHHH-HHHHHHTTCEEEEEECGGGGTST----------HHHHHHHHHHHH-HHTTCEEEEEECCHH
T ss_pred hHHHHHHHHhH-HHHHHhcCCEEEEEEChHHhcCc----------hHHHHHHHHHHH-HHCCCeEEEEeCCcH
Confidence 56888898885 67799999999999997776532 144555555444 345778898998883
No 66
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=34.33 E-value=47 Score=27.69 Aligned_cols=50 Identities=10% Similarity=-0.018 Sum_probs=30.7
Q ss_pred HHHHhhcCCC--EEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 261 EVAGHTFDPE--LVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 261 ~p~~~~f~Pd--lIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
...+...+|+ +||+- .|...+...+....++.+.+.+++++.+..++++-
T Consensus 114 ~~~~~~~~~~~~llilD--------e~~~~~~~d~~~~~~~~~~l~~~~~~~~~~vi~~~ 165 (235)
T 2w0m_A 114 IEAKQKLGYGKARLVID--------SVSALFLDKPAMARKISYYLKRVLNKWNFTIYATS 165 (235)
T ss_dssp HHHHHHHCSSCEEEEEE--------TGGGGSSSCGGGHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHhhCCCceEEEEE--------CchHhhcCCHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 3444667999 99882 22222222334456677778888887777776653
No 67
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=34.08 E-value=61 Score=32.19 Aligned_cols=55 Identities=25% Similarity=0.283 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcC-CCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCCCh
Q 019524 255 KLDEALEVAGHTFDPELVIYNAG-TDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPITS 324 (339)
Q Consensus 255 a~~~~l~p~~~~f~PdlIvvsaG-~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY~~ 324 (339)
.+.+.|..+.+.|+|++|+|... .-...+|.+. ++ .+-++. ++||+.+--.||..
T Consensus 72 kL~~aI~~~~~~~~P~~I~V~tTC~~elIGdDi~-------~v-------~~~~~~-~~pVi~v~tpgf~g 127 (525)
T 3aek_B 72 LLKDALAAAHARYKPQAMAVALTCTAELLQDDPN-------GI-------SRALNL-PVPVVPLELPSYSR 127 (525)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEECTTGGGSCCCHH-------HH-------HHHHTC-SSCEEECCCCTTTC
T ss_pred HHHHHHHHHHHhcCCCEEEEECCcHHHHhcccHH-------HH-------HHHhcC-CCCEEEEECCCcCC
Confidence 45566666778899997766555 5777777542 12 122222 78888888888844
No 68
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=33.88 E-value=62 Score=27.36 Aligned_cols=53 Identities=13% Similarity=0.107 Sum_probs=31.6
Q ss_pred HHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 258 ~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
+.+..++++++|++||+-.=......| +....+....+.+++++.+++++++-
T Consensus 118 ~~i~~~~~~~~~~~vviD~~~~l~~~~--------~~~~~~~l~~l~~~~~~~~~~vi~~~ 170 (247)
T 2dr3_A 118 EVLRQAIRDINAKRVVVDSVTTLYINK--------PAMARSIILQLKRVLAGTGCTSIFVS 170 (247)
T ss_dssp HHHHHHHHHHTCCEEEEETSGGGTTTC--------GGGHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEECCchHhhcCC--------HHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 334445577899999884321111112 22344555667788888888887764
No 69
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=33.84 E-value=1.1e+02 Score=29.54 Aligned_cols=50 Identities=22% Similarity=0.320 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHH
Q 019524 250 NEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFA 307 (339)
Q Consensus 250 ~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a 307 (339)
.+....|++++.-+ ++.+||+||+ +| |.. -.-.-+.+.+....+.+.+++
T Consensus 54 ~d~~~~l~~ll~~~-~~~~~D~Vli-aG-Dlf-----d~~~~~~~~~~~~~~~L~r~~ 103 (431)
T 3t1i_A 54 NDTFVTLDEILRLA-QENEVDFILL-GG-DLF-----HENKPSRKTLHTCLELLRKYC 103 (431)
T ss_dssp THHHHHHHHHHHHH-HHTTCSEEEE-CS-CCB-----SSSSCCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHH-hhcCCCEEEE-cC-ccc-----cCCCCCHHHHHHHHHHHHHHh
Confidence 45567788777655 7789999998 44 332 222345777777777777665
No 70
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=33.46 E-value=30 Score=30.89 Aligned_cols=20 Identities=30% Similarity=0.466 Sum_probs=14.4
Q ss_pred HcCCCeEEEEeccCcCCcchhh
Q 019524 187 QLNISRVMIIDLDAHQGNGHEK 208 (339)
Q Consensus 187 ~~~~~RV~IiD~DvHHGnGTq~ 208 (339)
+.| +||++||+|.. |+.|+.
T Consensus 63 ~~G-~rVlliD~D~q-~~~~~~ 82 (298)
T 2oze_A 63 KLN-LKVLMIDKDLQ-ATLTKD 82 (298)
T ss_dssp HTT-CCEEEEEECTT-CHHHHH
T ss_pred hCC-CeEEEEeCCCC-CCHHHH
Confidence 345 69999999996 555443
No 71
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=33.10 E-value=35 Score=30.57 Aligned_cols=14 Identities=21% Similarity=0.382 Sum_probs=12.3
Q ss_pred CeEEEEeccCcCCc
Q 019524 191 SRVMIIDLDAHQGN 204 (339)
Q Consensus 191 ~RV~IiD~DvHHGn 204 (339)
+||++||.|...++
T Consensus 112 ~rVLLID~D~~~~~ 125 (271)
T 3bfv_A 112 YKTLIVDGDMRKPT 125 (271)
T ss_dssp CCEEEEECCSSSCC
T ss_pred CeEEEEeCCCCCcc
Confidence 79999999998764
No 72
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=32.81 E-value=66 Score=26.67 Aligned_cols=51 Identities=14% Similarity=0.141 Sum_probs=31.1
Q ss_pred HHHhhcCCCEEEEEc---CCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 262 VAGHTFDPELVIYNA---GTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 262 p~~~~f~PdlIvvsa---G~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
.++++ +|++||+-. +.|.. +...-..+.+.++.+.+.+++++.+.+++++-
T Consensus 100 ~l~~~-~~~lliiD~~~~~l~~~-----~~~~~~~~~~~~~~~~L~~l~~~~~~~vi~~~ 153 (220)
T 2cvh_A 100 KTVDS-NFALVVVDSITAHYRAE-----ENRSGLIAELSRQLQVLLWIARKHNIPVIVIN 153 (220)
T ss_dssp HHCCT-TEEEEEEECCCCCTTGG-----GGSSTTHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHhhc-CCCEEEEcCcHHHhhhc-----CchHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 34444 799999832 22221 11112235666777778889988888888764
No 73
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=32.58 E-value=34 Score=31.09 Aligned_cols=16 Identities=38% Similarity=0.725 Sum_probs=13.4
Q ss_pred CeEEEEeccCcCCcch
Q 019524 191 SRVMIIDLDAHQGNGH 206 (339)
Q Consensus 191 ~RV~IiD~DvHHGnGT 206 (339)
+||++||.|..+++=+
T Consensus 134 ~rVLLID~D~r~~~l~ 149 (299)
T 3cio_A 134 QKVLFIDADLRRGYSH 149 (299)
T ss_dssp CCEEEEECCTTTCCHH
T ss_pred CcEEEEECCCCCccHH
Confidence 7999999999877643
No 74
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=32.52 E-value=2e+02 Score=25.13 Aligned_cols=72 Identities=22% Similarity=0.250 Sum_probs=40.2
Q ss_pred CCChHHHHHHHHHHHHHHHhhcCCCEEEE-------EcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 246 GTTTNEYLKKLDEALEVAGHTFDPELVIY-------NAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 246 g~~d~~yl~a~~~~l~p~~~~f~PdlIvv-------saG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
+.=+.+.+..+.+++..+-++-+-..||+ ++|.|...- +...-....+......+......+..|+|+..
T Consensus 22 NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~---~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav 98 (254)
T 3hrx_A 22 NAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEF---GDRKPDYEAHLRRYNRVVEALSGLEKPLVVAV 98 (254)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGT---TTSCCCHHHHTHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHh---cccchhhHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 34466677788888776644333345665 345554332 22222344444444445555566788999877
Q ss_pred CC
Q 019524 319 SG 320 (339)
Q Consensus 319 eG 320 (339)
.|
T Consensus 99 ~G 100 (254)
T 3hrx_A 99 NG 100 (254)
T ss_dssp CS
T ss_pred CC
Confidence 55
No 75
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=32.29 E-value=81 Score=28.25 Aligned_cols=62 Identities=15% Similarity=0.121 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCCC
Q 019524 251 EYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPIT 323 (339)
Q Consensus 251 ~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY~ 323 (339)
++...|.+.+ |.+++|+-..||+-.|--+..+ .+.+..+.+.+..+. +.+.++|+|.+||-.
T Consensus 4 ~~~~~~~~~~-pyi~~~~~~~iViKlGGs~l~~---------~~~~~~~~~~i~~l~-~~G~~vVlVhGgG~~ 65 (282)
T 2bty_A 4 DTVNVLLEAL-PYIKEFYGKTFVIKFGGSAMKQ---------ENAKKAFIQDIILLK-YTGIKPIIVHGGGPA 65 (282)
T ss_dssp HHHHHHHHHH-HHHHHHTTCEEEEEECSHHHHS---------HHHHHHHHHHHHHHH-HTTCEEEEEECCSHH
T ss_pred HHHHHHHHHH-HHHHHhcCCeEEEEECchhhCC---------hhHHHHHHHHHHHHH-HCCCcEEEEECCcHH
Confidence 5677788875 6669999999999988554432 344555555555543 346788888888753
No 76
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=32.15 E-value=1.4e+02 Score=26.51 Aligned_cols=67 Identities=12% Similarity=0.038 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHhhcC--CCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCC-CEEEEeCCCCCh
Q 019524 251 EYLKKLDEALEVAGHTFD--PELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNI-PIVMLTSGPITS 324 (339)
Q Consensus 251 ~yl~a~~~~l~p~~~~f~--PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~-p~v~vleGGY~~ 324 (339)
.+...+.+.+..++++|+ |+.|++..+ +.|.+. .+...+....+.+.+..++.+. .+|++.+.+|+.
T Consensus 94 ~~~~~~~~~w~~ia~~y~~~~~~v~~el~-----NEP~~~--~~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~ 163 (294)
T 2whl_A 94 SDLNRAVDYWIEMKDALIGKEDTVIINIA-----NEWYGS--WDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQ 163 (294)
T ss_dssp HHHHHHHHHHHHTHHHHTTCTTTEEEECC-----TTCCCS--SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTT
T ss_pred hhHHHHHHHHHHHHHHHcCCCCeEEEEec-----CCCCCC--CChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCC
Confidence 445555566666777775 455556554 778774 4555555555566666676643 344554445543
No 77
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=31.43 E-value=32 Score=32.23 Aligned_cols=19 Identities=16% Similarity=0.473 Sum_probs=13.5
Q ss_pred CeEEEEeccCcCCcchhhhhc
Q 019524 191 SRVMIIDLDAHQGNGHEKDFS 211 (339)
Q Consensus 191 ~RV~IiD~DvHHGnGTq~if~ 211 (339)
+||++||+| .+|| ....|.
T Consensus 173 ~rVlliD~D-~~~~-l~~~lg 191 (373)
T 3fkq_A 173 KKVFYLNIE-QCGT-TDVFFQ 191 (373)
T ss_dssp CCEEEEECC-TTCC-HHHHCC
T ss_pred CCEEEEECC-CCCC-HHHHcC
Confidence 699999999 6663 444443
No 78
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=31.19 E-value=35 Score=29.93 Aligned_cols=17 Identities=24% Similarity=0.122 Sum_probs=13.3
Q ss_pred cCCCeEEEEeccCcCCcc
Q 019524 188 LNISRVMIIDLDAHQGNG 205 (339)
Q Consensus 188 ~~~~RV~IiD~DvHHGnG 205 (339)
.| +||++||+|...++=
T Consensus 46 ~G-~~VlliD~D~~~~~l 62 (262)
T 2ph1_A 46 QG-KKVGILDADFLGPSI 62 (262)
T ss_dssp TT-CCEEEEECCSSCCHH
T ss_pred CC-CeEEEEeCCCCCCCH
Confidence 35 699999999976553
No 79
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=30.87 E-value=61 Score=31.27 Aligned_cols=55 Identities=16% Similarity=0.280 Sum_probs=35.7
Q ss_pred HHHHHHHHHhhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCCC
Q 019524 256 LDEALEVAGHTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPIT 323 (339)
Q Consensus 256 ~~~~l~p~~~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY~ 323 (339)
+.+.+..+.++|+|++|+|.... -...+|.+ ++.. + ++-++.++|++.+--.||.
T Consensus 85 L~~~i~~~~~~~~P~~I~v~~TC~~~iIGdDi-------~~v~---~---~~~~~~~ipVi~v~~~Gf~ 140 (460)
T 2xdq_A 85 LKRLCLEIKRDRNPSVIVWIGTCTTEIIKMDL-------EGLA---P---KLEAEIGIPIVVARANGLD 140 (460)
T ss_dssp HHHHHHHHHHHHCCSEEEEEECHHHHHTTCCH-------HHHH---H---HHHHHHSSCEEEEECCTTT
T ss_pred HHHHHHHHHHhcCCCEEEEECCCHHHHHhhCH-------HHHH---H---HHhhccCCcEEEEecCCcc
Confidence 56777778889999987775543 44555532 2222 2 2223458999999988885
No 80
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=30.84 E-value=38 Score=31.21 Aligned_cols=22 Identities=32% Similarity=0.397 Sum_probs=15.1
Q ss_pred HHHHcCCCeEEEEeccCcCCcchh
Q 019524 184 AFVQLNISRVMIIDLDAHQGNGHE 207 (339)
Q Consensus 184 l~~~~~~~RV~IiD~DvHHGnGTq 207 (339)
++.+.| +||++||+|. +||-|.
T Consensus 71 aLA~~G-kkVllID~Dp-q~~s~~ 92 (314)
T 3fwy_A 71 AFSILG-KRVLQIGCDP-KHDSTF 92 (314)
T ss_dssp HHHHTT-CCEEEEEESS-SCCTTH
T ss_pred HHHHCC-CeEEEEecCC-CCcccc
Confidence 344556 6999999998 455443
No 81
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=30.65 E-value=1.1e+02 Score=27.38 Aligned_cols=74 Identities=15% Similarity=0.223 Sum_probs=40.3
Q ss_pred cccccCCCCChHHHHHHHHHHHHHHHhhcCCCEEEE-------EcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCC
Q 019524 239 QKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY-------NAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRN 311 (339)
Q Consensus 239 ~NvPL~~g~~d~~yl~a~~~~l~p~~~~f~PdlIvv-------saG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~ 311 (339)
+|=|=..+.=+.+.+..+.+.+..+-++ +...||+ ++|.|....+ ....+......+++....+.
T Consensus 36 lnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~-------~~~~~~~~~~~~~~~l~~~~ 107 (264)
T 3he2_A 36 LQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDA-------FAADYPDRLIELHKAMDASP 107 (264)
T ss_dssp ECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCT-------TGGGHHHHHHHHHHHHHHCS
T ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccch-------hhHHHHHHHHHHHHHHHhCC
Confidence 3444333445677788888887766555 6667776 4666664211 11223333333444445678
Q ss_pred CCEEEEeCC
Q 019524 312 IPIVMLTSG 320 (339)
Q Consensus 312 ~p~v~vleG 320 (339)
.|+|+...|
T Consensus 108 kPvIAav~G 116 (264)
T 3he2_A 108 MPVVGAING 116 (264)
T ss_dssp SCEEEEECS
T ss_pred CCEEEEECC
Confidence 999987754
No 82
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=30.58 E-value=1.9e+02 Score=25.86 Aligned_cols=79 Identities=11% Similarity=0.077 Sum_probs=39.3
Q ss_pred ccccccCCCCChHHHHHHHHHHHHHHHhhcCCCEEEE-------EcCCCCCCCCCCCCCccCH-HH----HHHHHHHHHH
Q 019524 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY-------NAGTDILEGDPLGMLKISP-DG----IAARDEKTFR 305 (339)
Q Consensus 238 ~~NvPL~~g~~d~~yl~a~~~~l~p~~~~f~PdlIvv-------saG~D~~~~Dplg~~~lt~-~g----~~~~~~~l~~ 305 (339)
++|=|=+.+.=+.+.+..|.+.+..+-++-+- .||+ ++|.|.-.-. ...-.. .. +....+.++.
T Consensus 40 tlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 2f6q_A 40 MFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFT---DIPPGGVEEKAKNNAVLLREFVG 115 (280)
T ss_dssp EECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC-------CCCTTHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHh---hcCcchhhHHHHHHHHHHHHHHH
Confidence 34444334455677888888888776443334 5666 5666654311 111011 11 1122223333
Q ss_pred HHhhCCCCEEEEeCC
Q 019524 306 FARSRNIPIVMLTSG 320 (339)
Q Consensus 306 ~a~~~~~p~v~vleG 320 (339)
....+..|+|+...|
T Consensus 116 ~l~~~~kPvIAav~G 130 (280)
T 2f6q_A 116 CFIDFPKPLIAVVNG 130 (280)
T ss_dssp HHHSCCSCEEEEECS
T ss_pred HHHcCCCCEEEEECC
Confidence 345578899987654
No 83
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=29.95 E-value=1.2e+02 Score=26.86 Aligned_cols=62 Identities=19% Similarity=0.299 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHh-hcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCCCh
Q 019524 253 LKKLDEALEVAGH-TFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPITS 324 (339)
Q Consensus 253 l~a~~~~l~p~~~-~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY~~ 324 (339)
...+++++..+.+ .-+||+||+ +| |.... -+.+.|..+.+.+..+.++.++|++++ -|.-+.
T Consensus 50 ~~~l~~~l~~i~~~~~~~d~vi~-~G-Dl~~~-------~~~~~~~~~~~~l~~l~~~~~~pv~~v-~GNHD~ 112 (330)
T 3ib7_A 50 DDRLGELLEQLNQSGLRPDAIVF-TG-DLADK-------GEPAAYRKLRGLVEPFAAQLGAELVWV-MGNHDD 112 (330)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEE-CS-CCBTT-------CCHHHHHHHHHHHHHHHHHHTCEEEEC-CCTTSC
T ss_pred HHHHHHHHHHHHhcCCCCCEEEE-CC-CCCCC-------CCHHHHHHHHHHHHHHHhhcCCCEEEe-CCCCCC
Confidence 4566666665533 279999887 33 33211 125677777776766666667886554 455543
No 84
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=29.69 E-value=1.3e+02 Score=23.89 Aligned_cols=65 Identities=8% Similarity=0.060 Sum_probs=39.4
Q ss_pred ccCCCCChHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCC--C--CCCccCHHHHHHHHHHHHHHHhh
Q 019524 242 EVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDP--L--GMLKISPDGIAARDEKTFRFARS 309 (339)
Q Consensus 242 PL~~g~~d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dp--l--g~~~lt~~g~~~~~~~l~~~a~~ 309 (339)
|+|+..+ .++...+.+++..+.++++ +.++..-.+....++ + -++..+.+||..+.+.+.+..++
T Consensus 112 ~~p~~~~-~~~~~~~~~~~~~~a~~~~--~~~vd~~~~~~~~~~~~~~~Dg~Hpn~~G~~~~a~~l~~~l~~ 180 (185)
T 3hp4_A 112 YIPPNYG-PRYSKMFTSSFTQISEDTN--AHLMNFFMLDIAGKSDLMQNDSLHPNKKAQPLIRDEMYDSIKK 180 (185)
T ss_dssp CCCSTTC-HHHHHHHHHHHHHHHHHHC--CEEECCTTTTTTTCGGGBCTTSSSBCTTHHHHHHHHHHHHHHH
T ss_pred CCCCccc-HHHHHHHHHHHHHHHHHcC--CEEEcchhhhcCCCcccccCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 3444333 3466777777777777774 334433222211121 1 25789999999999988876653
No 85
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=29.21 E-value=1.4e+02 Score=25.94 Aligned_cols=72 Identities=14% Similarity=0.091 Sum_probs=37.3
Q ss_pred CCChHHHHHHHHHHHHHHHhhcCCCEEEE-------EcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 246 GTTTNEYLKKLDEALEVAGHTFDPELVIY-------NAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 246 g~~d~~yl~a~~~~l~p~~~~f~PdlIvv-------saG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
+.=+.+.+..+.+.+..+-++ +-..||+ ++|.|...-..... -....+......+......+..|+|+..
T Consensus 26 Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~kPvIAav 102 (233)
T 3r6h_A 26 NVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEA--KPAIDMLRGGFELSYRLLSYPKPVVIAC 102 (233)
T ss_dssp CCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---C--HHHHHHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccCh--HHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 444667778888887777554 4456665 45555432211000 0011222223334444456788999875
Q ss_pred CC
Q 019524 319 SG 320 (339)
Q Consensus 319 eG 320 (339)
.|
T Consensus 103 ~G 104 (233)
T 3r6h_A 103 TG 104 (233)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 86
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=28.94 E-value=2.1e+02 Score=25.27 Aligned_cols=74 Identities=18% Similarity=0.269 Sum_probs=38.3
Q ss_pred CCChHHHHHHHHHHHHHHHhhcCCCEEEE-------EcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 246 GTTTNEYLKKLDEALEVAGHTFDPELVIY-------NAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 246 g~~d~~yl~a~~~~l~p~~~~f~PdlIvv-------saG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
+.=+.+.+..+.+.+..+-++=.-..||+ ++|.|...-.....-. ....+.+..+.+++....+..|+|+..
T Consensus 27 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~kPvIAav 105 (261)
T 3pea_A 27 NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAK-QATELAQLGQVTFERVEKCSKPVIAAI 105 (261)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHH-HHHHHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchh-HHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 34466777888888776644333345665 4566654322111100 012233333444554566788998766
Q ss_pred CC
Q 019524 319 SG 320 (339)
Q Consensus 319 eG 320 (339)
.|
T Consensus 106 ~G 107 (261)
T 3pea_A 106 HG 107 (261)
T ss_dssp CS
T ss_pred CC
Confidence 44
No 87
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=28.67 E-value=59 Score=29.38 Aligned_cols=47 Identities=17% Similarity=0.378 Sum_probs=27.7
Q ss_pred HHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCC
Q 019524 258 EALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSG 320 (339)
Q Consensus 258 ~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleG 320 (339)
+.+..+.++|+||++|+.. |-+. ..|=.. -.++..+.++|++++.-|
T Consensus 54 ~~~~~~~~~~~pDfvI~is--------PN~a----~PGP~~----ARE~l~~~~iP~IvI~D~ 100 (283)
T 1qv9_A 54 EMALDIAEDFEPDFIVYGG--------PNPA----APGPSK----AREMLADSEYPAVIIGDA 100 (283)
T ss_dssp HHHHHHHHHHCCSEEEEEC--------SCTT----SHHHHH----HHHHHHTSSSCEEEEEEG
T ss_pred HHhhhhhhhcCCCEEEEEC--------CCCC----CCCchH----HHHHHHhCCCCEEEEcCC
Confidence 3334455899999999853 3332 223222 223335679999888643
No 88
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=28.29 E-value=7.2 Score=29.83 Aligned_cols=56 Identities=13% Similarity=0.078 Sum_probs=38.7
Q ss_pred HHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCE
Q 019524 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPI 314 (339)
Q Consensus 259 ~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~ 314 (339)
++..+.++|+-++=|+.++.|...+.|+|.|-+.-.|=..-.+...++.++.++.+
T Consensus 39 vis~l~~~~~v~vnIl~g~i~~i~~~~~G~L~v~l~G~~~~~~~ai~~L~~~~v~v 94 (100)
T 2qsw_A 39 IISHIVQEYQVEVSIIQGNIQQTKQGAVGSLYIQLLGEEQNILAAIEGLRKLRVET 94 (100)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEESCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCCEEEEEeeceEcCCeeEEEEEEEEECCHHHHHHHHHHHHHcCCEE
Confidence 45566788999999999999999999999987743221111233445556666544
No 89
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=28.11 E-value=1.1e+02 Score=27.15 Aligned_cols=79 Identities=15% Similarity=0.061 Sum_probs=42.6
Q ss_pred ccccccCCCCChHHHHHHHHHHHHHHHhhcCCCEEEEEc--------CCCCCCCCCCCCCccCHHHHHHHH-HHHHHHHh
Q 019524 238 DQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNA--------GTDILEGDPLGMLKISPDGIAARD-EKTFRFAR 308 (339)
Q Consensus 238 ~~NvPL~~g~~d~~yl~a~~~~l~p~~~~f~PdlIvvsa--------G~D~~~~Dplg~~~lt~~g~~~~~-~~l~~~a~ 308 (339)
++|=| +.+.=+.+.+..|.+.+..+-++-+...||+.. |.|...- ..-.-....+.... +.++....
T Consensus 23 tlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~---~~~~~~~~~~~~~~~~~~~~~l~ 98 (265)
T 2ppy_A 23 HLHIN-KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFL---RSADPRFKTQFCLFCNETLDKIA 98 (265)
T ss_dssp EECSS-TTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHH---TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCC-CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHH---hccchhHHHHHHHHHHHHHHHHH
Confidence 45556 656667778888888887774443445666654 5554221 00000112232222 33444445
Q ss_pred hCCCCEEEEeCC
Q 019524 309 SRNIPIVMLTSG 320 (339)
Q Consensus 309 ~~~~p~v~vleG 320 (339)
.+..|+|+...|
T Consensus 99 ~~~kPvIAav~G 110 (265)
T 2ppy_A 99 RSPQVYIACLEG 110 (265)
T ss_dssp HSSSEEEEEECS
T ss_pred cCCCCEEEEECC
Confidence 678898887654
No 90
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=28.00 E-value=1.4e+02 Score=26.86 Aligned_cols=66 Identities=17% Similarity=0.071 Sum_probs=44.5
Q ss_pred CChHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCCC
Q 019524 247 TTTNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPIT 323 (339)
Q Consensus 247 ~~d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY~ 323 (339)
....++...|.+.+ |.+++|+-..|||-.|--+..+ .+-...+.+.+..+. +.+.++|+|.+||-.
T Consensus 4 ~~~~~~~~~~~~a~-pyi~~~~~k~iViKlGGs~l~~---------~~~~~~~~~~i~~l~-~~G~~vViVhGgG~~ 69 (299)
T 2ap9_A 4 LPTHIKAQVLAEAL-PWLKQLHGKVVVVKYGGNAMTD---------DTLRRAFAADMAFLR-NCGIHPVVVHGGGPQ 69 (299)
T ss_dssp SCHHHHHHHHHHHH-HHHHHHTTCEEEEEECTHHHHS---------HHHHHHHHHHHHHHH-TTTCEEEEEECCSHH
T ss_pred CChhhHHHHHHHHH-HHHHHhCCCeEEEEECchhhCC---------chHHHHHHHHHHHHH-HCCCcEEEEECCcHH
Confidence 34677888898886 5669999999999988554432 233444555554442 346788888888753
No 91
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=27.97 E-value=2.6e+02 Score=24.41 Aligned_cols=71 Identities=21% Similarity=0.230 Sum_probs=36.9
Q ss_pred CChHHHHHHHHHHHHHHHhhcCCCEEEEE-------cCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeC
Q 019524 247 TTTNEYLKKLDEALEVAGHTFDPELVIYN-------AGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTS 319 (339)
Q Consensus 247 ~~d~~yl~a~~~~l~p~~~~f~PdlIvvs-------aG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vle 319 (339)
.=+.+.+..+.+.+..+-++-....||+. +|.|...-... .-....+....+.+++....+..|+|+...
T Consensus 23 al~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~l~~~~kPvIAav~ 99 (254)
T 3gow_A 23 AITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDR---KPDYEAHLRRYNRVVEALSGLEKPLVVAVN 99 (254)
T ss_dssp CBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTS---CCCHHHHTHHHHHHHHHHHTCSSCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCCChHHHhhc---chhHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 44667778888888776444334456553 35554332111 112222222233344444567889988665
Q ss_pred C
Q 019524 320 G 320 (339)
Q Consensus 320 G 320 (339)
|
T Consensus 100 G 100 (254)
T 3gow_A 100 G 100 (254)
T ss_dssp S
T ss_pred C
Confidence 4
No 92
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=27.61 E-value=38 Score=29.60 Aligned_cols=18 Identities=22% Similarity=0.386 Sum_probs=13.3
Q ss_pred CeEEEEeccCcCCcchhhh
Q 019524 191 SRVMIIDLDAHQGNGHEKD 209 (339)
Q Consensus 191 ~RV~IiD~DvHHGnGTq~i 209 (339)
+||++||+|.. |+.+..+
T Consensus 56 ~~VlliD~D~~-~~~~~~~ 73 (267)
T 3k9g_A 56 NKVLLIDMDTQ-ASITSYF 73 (267)
T ss_dssp SCEEEEEECTT-CHHHHHT
T ss_pred CCEEEEECCCC-CCHHHHh
Confidence 79999999985 4544443
No 93
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=27.59 E-value=46 Score=30.48 Aligned_cols=20 Identities=10% Similarity=0.285 Sum_probs=14.5
Q ss_pred CeEEEEeccCcCCcchhhhhcC
Q 019524 191 SRVMIIDLDAHQGNGHEKDFSS 212 (339)
Q Consensus 191 ~RV~IiD~DvHHGnGTq~if~~ 212 (339)
+||++||.|. .+ .....|..
T Consensus 43 ~rVLlvD~D~-~~-~l~~~l~~ 62 (324)
T 3zq6_A 43 KKTLVISTDP-AH-SLSDSLER 62 (324)
T ss_dssp CCEEEEECCS-SC-CHHHHHTS
T ss_pred CcEEEEeCCC-Cc-CHHHHhCC
Confidence 6999999999 44 45555643
No 94
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=27.56 E-value=1.5e+02 Score=26.30 Aligned_cols=68 Identities=16% Similarity=0.194 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCEEEE-------EcCCCCCCCCCCCCCccCHHH---HHHHHHHHHHHHhhCCCCEEEEe
Q 019524 249 TNEYLKKLDEALEVAGHTFDPELVIY-------NAGTDILEGDPLGMLKISPDG---IAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 249 d~~yl~a~~~~l~p~~~~f~PdlIvv-------saG~D~~~~Dplg~~~lt~~g---~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
+.+.+..+.+.+..+-++-+...||+ ++|.|...-.... +.+. +......++.....+..|+|+..
T Consensus 49 ~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~kPvIAav 124 (263)
T 2j5g_A 49 TGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVT----NPREWDKTYWEGKKVLQNLLDIEVPVISAV 124 (263)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTT----SHHHHHHHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred CHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccC----CHHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 45667777777776644434456666 6788874321111 2222 21112233344456788998876
Q ss_pred CC
Q 019524 319 SG 320 (339)
Q Consensus 319 eG 320 (339)
.|
T Consensus 125 ~G 126 (263)
T 2j5g_A 125 NG 126 (263)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 95
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=27.45 E-value=35 Score=27.84 Aligned_cols=12 Identities=8% Similarity=0.014 Sum_probs=9.9
Q ss_pred EEEeCCCCChhH
Q 019524 315 VMLTSGPITSEK 326 (339)
Q Consensus 315 v~vleGGY~~~~ 326 (339)
|.+|+|||..+.
T Consensus 133 V~~L~GG~~aW~ 144 (157)
T 2gwf_A 133 PLVLEGGYENWL 144 (157)
T ss_dssp CEEETTHHHHHH
T ss_pred eEEEccHHHHHH
Confidence 789999997764
No 96
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=26.92 E-value=3.4e+02 Score=24.24 Aligned_cols=75 Identities=13% Similarity=0.152 Sum_probs=35.0
Q ss_pred CCChHHHHHHHHHHHHHHHhhcCCCEEEE-------EcCCCCCCCCCCCCCcc-C----HHHHHHHHHHHHHHHhhCCCC
Q 019524 246 GTTTNEYLKKLDEALEVAGHTFDPELVIY-------NAGTDILEGDPLGMLKI-S----PDGIAARDEKTFRFARSRNIP 313 (339)
Q Consensus 246 g~~d~~yl~a~~~~l~p~~~~f~PdlIvv-------saG~D~~~~Dplg~~~l-t----~~g~~~~~~~l~~~a~~~~~p 313 (339)
+.=+.+.+..|.+.+..+-++-+...||+ ++|.|...-.....-.- + ...+......++.....+..|
T Consensus 46 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP 125 (290)
T 3sll_A 46 NAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDEVILTLRRMHQP 125 (290)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccchhHHHHHHHHHHHHHHHHHhCCCC
Confidence 44466778888888876643333345655 35556433221111000 0 112233333344444567889
Q ss_pred EEEEeCC
Q 019524 314 IVMLTSG 320 (339)
Q Consensus 314 ~v~vleG 320 (339)
+|+...|
T Consensus 126 vIAav~G 132 (290)
T 3sll_A 126 VIAAING 132 (290)
T ss_dssp EEEEECS
T ss_pred EEEEECC
Confidence 9876654
No 97
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=26.74 E-value=91 Score=27.63 Aligned_cols=48 Identities=15% Similarity=0.153 Sum_probs=30.1
Q ss_pred HHHhhcCCCEEEEEcCCCCCCCCCCCCC----ccCH-HHHHHHHHHHHHHHhhCCCCEEEE
Q 019524 262 VAGHTFDPELVIYNAGTDILEGDPLGML----KISP-DGIAARDEKTFRFARSRNIPIVML 317 (339)
Q Consensus 262 p~~~~f~PdlIvvsaG~D~~~~Dplg~~----~lt~-~g~~~~~~~l~~~a~~~~~p~v~v 317 (339)
......+|++||+- .|...+ .+.. ....++.+.|.+++++.+++++++
T Consensus 141 a~~~~~~p~llilD--------ept~~~~~~~~~d~~~~~~~i~~~L~~la~~~~~~vi~v 193 (296)
T 1cr0_A 141 YMRSGLGCDVIILD--------HISIVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVVI 193 (296)
T ss_dssp HHHHTTCCSEEEEE--------EEC-----------CHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred HHHHhcCCCEEEEc--------CccccCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 34466799999982 222211 0233 556778888889998888888876
No 98
>3hsy_A Glutamate receptor 2; ligand-gated ION channel, synapse, cell CELL membrane, endoplasmic reticulum, glycoprotein, ION TRA ionic channel; HET: NAG BMA; 1.75A {Rattus norvegicus} PDB: 3h5v_A* 3h5w_A 3o2j_A* 2wjw_A* 2wjx_A 3n6v_A
Probab=26.64 E-value=1.1e+02 Score=28.01 Aligned_cols=34 Identities=6% Similarity=0.007 Sum_probs=24.0
Q ss_pred HHHHHHHHHHcCCCeEEEEeccCcCCcchhhhhcC
Q 019524 178 SLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSS 212 (339)
Q Consensus 178 AIAa~~l~~~~~~~RV~IiD~DvHHGnGTq~if~~ 212 (339)
+-++..+.++.|.+||+||- |-..|.+..+.|.+
T Consensus 109 ~~a~~~~~~~~gw~~vaii~-d~~~g~~~~~~~~~ 142 (376)
T 3hsy_A 109 KGALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLD 142 (376)
T ss_dssp HHHHHHHHHHTTCCEEEEEE-CSTTCSHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEE-eCchhHHHHHHHHH
Confidence 33333344678899999998 88888877766643
No 99
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=26.57 E-value=41 Score=31.59 Aligned_cols=13 Identities=46% Similarity=0.853 Sum_probs=11.4
Q ss_pred CeEEEEeccCcCCc
Q 019524 191 SRVMIIDLDAHQGN 204 (339)
Q Consensus 191 ~RV~IiD~DvHHGn 204 (339)
+||++||+|. +||
T Consensus 144 ~rVlliD~D~-q~~ 156 (398)
T 3ez2_A 144 LRILVIDLDP-QSS 156 (398)
T ss_dssp CCEEEEEECT-TCH
T ss_pred CeEEEEeCCC-CCC
Confidence 6999999999 565
No 100
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=26.34 E-value=86 Score=29.06 Aligned_cols=23 Identities=17% Similarity=0.273 Sum_probs=16.9
Q ss_pred cCCCeEEEEeccCcCCcchhhhhcCC
Q 019524 188 LNISRVMIIDLDAHQGNGHEKDFSSD 213 (339)
Q Consensus 188 ~~~~RV~IiD~DvHHGnGTq~if~~d 213 (339)
.| +||++||+|.- + +...+|.-+
T Consensus 53 ~G-~rVLlvD~D~~-~-~l~~~l~~~ 75 (349)
T 3ug7_A 53 KG-LKVVIVSTDPA-H-SLRDIFEQE 75 (349)
T ss_dssp SS-CCEEEEECCTT-C-HHHHHHCSC
T ss_pred CC-CeEEEEeCCCC-C-CHHHHhCCC
Confidence 35 69999999993 3 666777544
No 101
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=26.27 E-value=74 Score=28.88 Aligned_cols=62 Identities=13% Similarity=0.171 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCC
Q 019524 250 NEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPI 322 (339)
Q Consensus 250 ~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY 322 (339)
.++...|.+.+ |.+++|+-..|||-.|--+..+ .+-...+.+.+..+. +.+.++|+|.+||-
T Consensus 18 ~~~~~~~~~a~-pyi~~~~~k~iVIKlGGs~l~~---------~~~~~~~~~~i~~l~-~~G~~vViVhGgG~ 79 (298)
T 2rd5_A 18 DYRVEILSESL-PFIQKFRGKTIVVKYGGAAMTS---------PELKSSVVSDLVLLA-CVGLRPILVHGGGP 79 (298)
T ss_dssp CHHHHHHHHTH-HHHHHTTTCEEEEEECTHHHHC---------HHHHHHHHHHHHHHH-HTTCEEEEEECCHH
T ss_pred HHHHHHHHHHH-HHHHHhcCCEEEEEECchhhCC---------hhHHHHHHHHHHHHH-HCCCCEEEEECCcH
Confidence 46888888885 5669999999999988554432 334455555555443 34678888988865
No 102
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=25.75 E-value=58 Score=32.12 Aligned_cols=55 Identities=7% Similarity=0.140 Sum_probs=35.8
Q ss_pred HHHHHHHHhhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCCCh
Q 019524 257 DEALEVAGHTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPITS 324 (339)
Q Consensus 257 ~~~l~p~~~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY~~ 324 (339)
.+.|..+.++|+|++|+|.... -...+|.+. ++.+ .+ -++.++||+.+--.||..
T Consensus 77 ~~~I~~~~~~~~P~~I~V~tTC~~e~IGdDi~-------~v~~---~~---~~~~g~pVi~v~tpgf~g 132 (511)
T 2xdq_B 77 VDNIIRKDTEEHPDLIVLTPTCTSSILQEDLQ-------NFVR---RA---SLSTTADVLLADVNHYRV 132 (511)
T ss_dssp HHHHHHHHHHHCCSEEEEECCHHHHTTCCCHH-------HHHH---HH---HHHCSSEEEECCCCTTTC
T ss_pred HHHHHHHHHhcCCCEEEEeCCcHHHHhccCHH-------HHHH---Hh---hhccCCCEEEeeCCCccc
Confidence 3444556678999998887765 556666432 2222 22 234689999999999954
No 103
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=25.70 E-value=12 Score=28.72 Aligned_cols=57 Identities=12% Similarity=0.116 Sum_probs=39.9
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHH--HHHHHHHHHHHHhhCCCCE
Q 019524 257 DEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDG--IAARDEKTFRFARSRNIPI 314 (339)
Q Consensus 257 ~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g--~~~~~~~l~~~a~~~~~p~ 314 (339)
+.++..+.++|+-++=|+.++.|...+.|+|.|-+.-.| -.. .+...++.++.++.+
T Consensus 34 ~PvIs~l~~~~~v~vnIL~g~I~~i~~~~~G~L~v~l~G~~~~~-~~~ai~~L~~~~v~v 92 (98)
T 3ced_A 34 EPIVSSLSTAYDIKINILEANIKNTKNGTVGFLVLHIPYISSVD-FGKFEKELIERQVKM 92 (98)
T ss_dssp HHHHHHHHHHHTCCCEEEEEEEEEETTEEEEEEEEEESCCCHHH-HHHHHHHHHHTTCEE
T ss_pred chHHHHHHHHHCCcEEEEEEEeEEeCCEeEEEEEEEEeCCCHHH-HHHHHHHHHHCCCEE
Confidence 355666778899999999999999999999998773322 111 223445556666544
No 104
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=25.21 E-value=8.5 Score=29.45 Aligned_cols=56 Identities=16% Similarity=0.321 Sum_probs=39.1
Q ss_pred HHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCE
Q 019524 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPI 314 (339)
Q Consensus 259 ~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~ 314 (339)
++..+.++|+-++=|+.++.|...+.|+|.|-+.-.|=..-.+...++.++.++.+
T Consensus 39 vis~l~~~~~v~vnIl~g~i~~i~~~~~G~L~v~l~G~~~~~~~ai~~L~~~~v~v 94 (101)
T 2qrr_A 39 LMSQISRKYNIDVSILSSDLDYAGGVKFGMMVAELFGNEQDDSAAIEYLRENNVKV 94 (101)
T ss_dssp HHHHHHHHSCCEEEEEEEEEEEETTEEEEEEEEEEESCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCCEEEEEeeeeEcCCeeEEEEEEEEeCCHHHHHHHHHHHHHcCCEE
Confidence 45566789999999999999999999999987743221111233445556666544
No 105
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=25.03 E-value=2.2e+02 Score=24.27 Aligned_cols=57 Identities=14% Similarity=0.109 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHH-HHHHHHHHHHHhhCCCCEE
Q 019524 249 TNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGI-AARDEKTFRFARSRNIPIV 315 (339)
Q Consensus 249 d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~-~~~~~~l~~~a~~~~~p~v 315 (339)
|++.++.+++.+. +.++...+.|++..|.+.. -. -+.+ .+.-+.+.+.|++.|++++
T Consensus 80 ~~~~~~~~~~~i~-~a~~lG~~~v~~~~g~~~~-----~~----~~~~~~~~l~~l~~~a~~~gv~l~ 137 (272)
T 2q02_A 80 TEEVVKKTEGLLR-DAQGVGARALVLCPLNDGT-----IV----PPEVTVEAIKRLSDLFARYDIQGL 137 (272)
T ss_dssp CHHHHHHHHHHHH-HHHHHTCSEEEECCCCSSB-----CC----CHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHHH-HHHHhCCCEEEEccCCCch-----hH----HHHHHHHHHHHHHHHHHHcCCEEE
Confidence 4556677777665 4588999999998886531 11 1223 3334456667777776544
No 106
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=24.32 E-value=89 Score=30.40 Aligned_cols=57 Identities=18% Similarity=0.265 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHhh-----CCCCEEEEeCCCCCh
Q 019524 254 KKLDEALEVAGHTFDPELVIYNAGT-DILEGDPLGMLKISPDGIAARDEKTFRFARS-----RNIPIVMLTSGPITS 324 (339)
Q Consensus 254 ~a~~~~l~p~~~~f~PdlIvvsaG~-D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~-----~~~p~v~vleGGY~~ 324 (339)
+.+.+.|..+.++|+|++|+|.... -...+|.+. . +.+-+++ .+.||+.+--.||..
T Consensus 78 ~~L~~~I~~~~~~~~P~~I~V~tTC~~e~IGdDi~----------~----v~~~~~~~~~~~~~~pVi~v~tpgf~g 140 (458)
T 3pdi_B 78 ENVVEALKTICERQNPSVIGLLTTGLSETQGCDLH----------T----ALHEFRTQYEEYKDVPIVPVNTPDFSG 140 (458)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEECHHHHTTCTTHH----------H----HHHHTTTSCCSCSCSCEEEECCCTTSS
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCcHHHHhcCCHH----------H----HHHHHHHhccccCCCeEEEeeCCCcCC
Confidence 3455666677788999998876653 444444322 1 2222233 278999999999953
No 107
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=24.23 E-value=1.9e+02 Score=26.03 Aligned_cols=71 Identities=20% Similarity=0.302 Sum_probs=36.2
Q ss_pred CCChHHHHHHHHHHHHHHHhhcCCCEEEE-------EcCCCCCCCCCCCCCccCHH---HHHHHHHHHHHHHhhCCCCEE
Q 019524 246 GTTTNEYLKKLDEALEVAGHTFDPELVIY-------NAGTDILEGDPLGMLKISPD---GIAARDEKTFRFARSRNIPIV 315 (339)
Q Consensus 246 g~~d~~yl~a~~~~l~p~~~~f~PdlIvv-------saG~D~~~~Dplg~~~lt~~---g~~~~~~~l~~~a~~~~~p~v 315 (339)
+.=+.+.+..+.+.+..+-++-+...||+ ++|.|.-.- .... ..+ .+......++.....+..|+|
T Consensus 55 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~---~~~~-~~~~~~~~~~~~~~~~~~l~~~~kPvI 130 (287)
T 2vx2_A 55 NTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKEL---TEEQ-GRDYHAEVFQTCSKVMMHIRNHPVPVI 130 (287)
T ss_dssp TCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-C---CGGG-CHHHHHHHHHHHHHHHHHHHTCSSCEE
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHH---hccc-chhHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 34466677777777765533323346665 567776431 1110 122 122222334444456788999
Q ss_pred EEeCC
Q 019524 316 MLTSG 320 (339)
Q Consensus 316 ~vleG 320 (339)
+...|
T Consensus 131 Aav~G 135 (287)
T 2vx2_A 131 AMVNG 135 (287)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 87654
No 108
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=24.07 E-value=2.5e+02 Score=24.78 Aligned_cols=69 Identities=17% Similarity=0.064 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCEEEE-------EcCCCCCCCCCCCCCcc---CHH---HHHHHHHHHHHHHhhCCCCEE
Q 019524 249 TNEYLKKLDEALEVAGHTFDPELVIY-------NAGTDILEGDPLGMLKI---SPD---GIAARDEKTFRFARSRNIPIV 315 (339)
Q Consensus 249 d~~yl~a~~~~l~p~~~~f~PdlIvv-------saG~D~~~~Dplg~~~l---t~~---g~~~~~~~l~~~a~~~~~p~v 315 (339)
+.+.+..|.+.+..+-++-+...||+ ++|.|...- ....- ..+ .+......++.....+..|+|
T Consensus 28 ~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI 104 (269)
T 1nzy_A 28 SVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREI---PLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVL 104 (269)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGS---CSSSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEE
T ss_pred CHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHH---hhcccccChHHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 56677777777776644434456666 456665431 11100 111 222222333344456789999
Q ss_pred EEeCC
Q 019524 316 MLTSG 320 (339)
Q Consensus 316 ~vleG 320 (339)
+...|
T Consensus 105 Aav~G 109 (269)
T 1nzy_A 105 AAING 109 (269)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 86654
No 109
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=23.86 E-value=1.2e+02 Score=27.37 Aligned_cols=41 Identities=2% Similarity=-0.025 Sum_probs=25.3
Q ss_pred cchHHHHHHHHHHHcCCCeEEEEeccCcCCcchhhhhcCCCc
Q 019524 174 YADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSR 215 (339)
Q Consensus 174 fNnvAIAa~~l~~~~~~~RV~IiD~DvHHGnGTq~if~~d~~ 215 (339)
-+|..-.++.+++ .|+++++++-+|.-.-.-+.++....|+
T Consensus 16 ~~d~~~vl~~a~~-~gV~~~v~~g~~~~~~~~~~~la~~~~~ 56 (287)
T 3rcm_A 16 HDQQAAIVERALE-AGVTQMLLTGTSLAVSEQALELCQQLDA 56 (287)
T ss_dssp TTCHHHHHHHHHH-TTEEEEEECCCSHHHHHHHHHHHHHHCT
T ss_pred ccCHHHHHHHHHH-cCCeEEEEecCCHHHHHHHHHHHHhCCC
Confidence 3455444455544 4788999887776665556666655555
No 110
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=23.75 E-value=1.4e+02 Score=28.30 Aligned_cols=71 Identities=7% Similarity=0.126 Sum_probs=44.5
Q ss_pred ChHHHHHHHHHHHHHHHhh--------cC--CCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCC-CCEEE
Q 019524 248 TTNEYLKKLDEALEVAGHT--------FD--PELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRN-IPIVM 316 (339)
Q Consensus 248 ~d~~yl~a~~~~l~p~~~~--------f~--PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~-~p~v~ 316 (339)
+|+++...+++.+..++++ |+ |-++.++.+ +.|-..-..+.+.+....+.+.+.+++.. -.+|+
T Consensus 147 ~dp~~~~~~~~~~~~l~~r~N~~tG~~y~~~p~I~~w~l~-----NEp~~~~~~~~~~~~~w~~~~~~~IR~~Dp~~lVt 221 (383)
T 3pzg_A 147 RDERIKEEYKKYVSFLINHVNVYTGVPYREEPTIMAWELA-----NELRCETDKSGNTLVEWVKEMSSYIKSLDPNHLVA 221 (383)
T ss_dssp HCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESC-----BTCCCTTCTTSHHHHHHHHHHHHHHHHHCSSSEEE
T ss_pred CCHHHHHHHHHHHHHHHhhhccccCcccCCCCcEEEEEec-----CCCCcccCccHHHHHHHHHHHHHHHHhhCCCceEE
Confidence 4678899999999999988 64 779999887 44433222233445444455666666643 23444
Q ss_pred E-eCCCCC
Q 019524 317 L-TSGPIT 323 (339)
Q Consensus 317 v-leGGY~ 323 (339)
+ .||.|.
T Consensus 222 ~G~~g~~~ 229 (383)
T 3pzg_A 222 VGDEGFFS 229 (383)
T ss_dssp CCCCCCCB
T ss_pred Eccccccc
Confidence 4 466663
No 111
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=23.68 E-value=1.5e+02 Score=26.01 Aligned_cols=53 Identities=8% Similarity=0.077 Sum_probs=39.4
Q ss_pred CCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCCEEEEeCCCCC
Q 019524 268 DPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIPIVMLTSGPIT 323 (339)
Q Consensus 268 ~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p~v~vleGGY~ 323 (339)
++..||+-.|--+..++ +...++.+-+..+.+.+.++. +.+.++|+|.+||--
T Consensus 11 ~~~~iViKiGGs~l~~~--~~~~~~~~~i~~~a~~I~~l~-~~G~~vViV~GgG~~ 63 (255)
T 2jjx_A 11 PYKRVLIKLSGGALADQ--TGNSFNSKRLEHIANEILSIV-DLGIEVSIVIGGGNI 63 (255)
T ss_dssp BCSEEEEEECGGGTSCS--SSCSCCHHHHHHHHHHHHHHH-TTTCEEEEEECCTTT
T ss_pred cCCEEEEEECHHHhCCC--CCCCCCHHHHHHHHHHHHHHH-HCCCeEEEEECchHH
Confidence 56789999998887665 445678888888888776654 346688988888763
No 112
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=23.53 E-value=48 Score=31.24 Aligned_cols=15 Identities=40% Similarity=0.744 Sum_probs=12.0
Q ss_pred CeEEEEeccCcCCcch
Q 019524 191 SRVMIIDLDAHQGNGH 206 (339)
Q Consensus 191 ~RV~IiD~DvHHGnGT 206 (339)
+||++||+|. +||-+
T Consensus 147 ~rVlliD~D~-~~~l~ 161 (403)
T 3ez9_A 147 LRILVIDLDP-QASST 161 (403)
T ss_dssp CCEEEEEESS-SSGGG
T ss_pred CeEEEEeCCC-CCChh
Confidence 6999999999 56533
No 113
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=23.32 E-value=14 Score=28.62 Aligned_cols=55 Identities=15% Similarity=0.251 Sum_probs=38.8
Q ss_pred HHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCCC
Q 019524 259 ALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNIP 313 (339)
Q Consensus 259 ~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~p 313 (339)
++..+.++|+-++=|+.++.|...+.|+|.|-+.-.|=..-.+...++.++.++.
T Consensus 37 iIs~l~~~~~v~vnIL~g~I~~i~~~~~G~L~v~l~G~~~~~~~ai~~L~~~~v~ 91 (106)
T 3dhx_A 37 LLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVK 91 (106)
T ss_dssp HHHHHHHHSCCEEEEEEEEEEEETTEEEEEEEEEEESCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHCCCEEEEEEEeEEECCeeEEEEEEEEeCCHHHHHHHHHHHHHCCCE
Confidence 5566778999999999999999999999988664332122223344555666654
No 114
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=22.95 E-value=2.3e+02 Score=27.35 Aligned_cols=67 Identities=12% Similarity=0.080 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHhhcC--CCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHhhCCC-CEEEEeCCCCCh
Q 019524 251 EYLKKLDEALEVAGHTFD--PELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRFARSRNI-PIVMLTSGPITS 324 (339)
Q Consensus 251 ~yl~a~~~~l~p~~~~f~--PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~a~~~~~-p~v~vleGGY~~ 324 (339)
.+...+.+.+..++++|+ |+.|++..+ ..|.+. .+.+.+....+.+.+..++.+. .+|++.+.+|+.
T Consensus 102 ~~~~~~~~~w~~iA~ryk~~~~~Vi~eL~-----NEP~~~--~~~~~w~~~~~~~i~aIR~~dp~~~I~v~g~~w~~ 171 (464)
T 1wky_A 102 ASLNRAVDYWIEMRSALIGKEDTVIINIA-----NEWFGS--WDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQ 171 (464)
T ss_dssp HHHHHHHHHHHHTGGGTTTCTTTEEEECC-----TTCCCS--SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCCeEEEEec-----cCCCCC--CCHHHHHHHHHHHHHHHHhcCCCCEEEEcCCCcCc
Confidence 456666666677778886 566666544 778775 4565566655666677777643 345555445643
No 115
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=22.33 E-value=77 Score=28.00 Aligned_cols=23 Identities=22% Similarity=0.185 Sum_probs=16.5
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCC
Q 019524 257 DEALEVAGHTFDPELVIYNAGTD 279 (339)
Q Consensus 257 ~~~l~p~~~~f~PdlIvvsaG~D 279 (339)
.+.|..++++++||+|+.-.+.|
T Consensus 86 ~~~l~~~ir~~~PdvV~t~~~~d 108 (242)
T 2ixd_A 86 IREIVKVIRTYKPKLVFAPYYED 108 (242)
T ss_dssp HHHHHHHHHHHCCSEEEEECSCS
T ss_pred HHHHHHHHHHcCCCEEEECCCCC
Confidence 34555677999999998755544
No 116
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=21.96 E-value=3.7e+02 Score=24.59 Aligned_cols=74 Identities=12% Similarity=0.069 Sum_probs=25.3
Q ss_pred cCCcchhhhhcCCCcEEEEEeeCCCC--CCC-CcccCC---ccccccccCCCCChHHHHHHHHHHHHHHHhhcCCCEEEE
Q 019524 201 HQGNGHEKDFSSDSRVYILDMFNPGI--YPR-DYEARR---FIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY 274 (339)
Q Consensus 201 HHGnGTq~if~~d~~Vl~iSiH~~~~--yP~-tg~~~~---~~~~NvPL~~g~~d~~yl~a~~~~l~p~~~~f~PdlIvv 274 (339)
||-+||-..=..-|..++.......+ |.. .-+... ..++|=|=..+.=+.+.+..|.+++..+-++-....||+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~~~Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVl 85 (333)
T 3njd_A 6 HHHMGTLEAQTQGPGSMTHAIRPVDFDNLKTMTYEVTDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILV 85 (333)
T ss_dssp -----------------------CCTTSCSSEEEEEETTEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred cccccchhhcccCCCcccCCCCCCCCCCCCeEEEEEECCEEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEE
Confidence 55667666655555555544443211 111 000001 134565544455567788888888877744334456665
No 117
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=21.86 E-value=1.5e+02 Score=28.61 Aligned_cols=24 Identities=8% Similarity=0.308 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcC
Q 019524 254 KKLDEALEVAGHTFDPELVIYNAG 277 (339)
Q Consensus 254 ~a~~~~l~p~~~~f~PdlIvvsaG 277 (339)
+.+.+.|..+.+.|+|++|+|...
T Consensus 82 ~~L~~aI~~~~~~~~P~~I~V~tT 105 (458)
T 1mio_B 82 SNIKTAVKNIFSLYNPDIIAVHTT 105 (458)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEEECC
Confidence 345566667778899999877653
No 118
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=21.84 E-value=62 Score=28.23 Aligned_cols=24 Identities=21% Similarity=0.156 Sum_probs=17.1
Q ss_pred HHHHHHHHhhcCCCEEEEEcCCCC
Q 019524 257 DEALEVAGHTFDPELVIYNAGTDI 280 (339)
Q Consensus 257 ~~~l~p~~~~f~PdlIvvsaG~D~ 280 (339)
.+.|..++++++||+|+.-.+.|.
T Consensus 84 ~~~l~~~ir~~~P~~V~t~~~~d~ 107 (227)
T 1uan_A 84 RLKLAQALRRLRPRVVFAPLEADR 107 (227)
T ss_dssp HHHHHHHHHHHCEEEEEEECSCCS
T ss_pred HHHHHHHHHHhCCCEEEeCCCCCC
Confidence 345566779999999987655443
No 119
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=21.80 E-value=1.7e+02 Score=27.50 Aligned_cols=58 Identities=7% Similarity=0.090 Sum_probs=30.6
Q ss_pred HHHHHhhcCCCEEEEEcCCCCCC-CCCCCCC-----ccCHHHHHHHHHHHHHHHhhCCCCEEEE
Q 019524 260 LEVAGHTFDPELVIYNAGTDILE-GDPLGML-----KISPDGIAARDEKTFRFARSRNIPIVML 317 (339)
Q Consensus 260 l~p~~~~f~PdlIvvsaG~D~~~-~Dplg~~-----~lt~~g~~~~~~~l~~~a~~~~~p~v~v 317 (339)
+..+++..++++|||-.=.-... .+.-|.+ .+..+...++.+.|..++++.+++++++
T Consensus 144 l~~l~~~~~~~lVVIDsl~~l~~~~e~~g~~gd~~~~~~~r~~~~~lr~L~~~a~~~~~~VI~~ 207 (366)
T 1xp8_A 144 MELLVRSGAIDVVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSKTGTAAIFI 207 (366)
T ss_dssp HHHHHTTTCCSEEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred HHHHHhcCCCCEEEEeChHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 34455678999999843211110 1100111 0112334555666677788889988876
No 120
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=21.51 E-value=62 Score=29.73 Aligned_cols=22 Identities=23% Similarity=0.448 Sum_probs=15.1
Q ss_pred HcCCCeEEEEeccCcCCcchhhhhc
Q 019524 187 QLNISRVMIIDLDAHQGNGHEKDFS 211 (339)
Q Consensus 187 ~~~~~RV~IiD~DvHHGnGTq~if~ 211 (339)
+.| +||++||.|..| ...+.|.
T Consensus 45 ~~G-~rVllvD~D~~~--~l~~~l~ 66 (329)
T 2woo_A 45 KVR-SSVLLISTDPAH--NLSDAFG 66 (329)
T ss_dssp TSS-SCEEEEECCTTC--HHHHHHS
T ss_pred HCC-CeEEEEECCCCc--CHHHHhC
Confidence 345 699999999973 3444443
No 121
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=21.27 E-value=63 Score=30.16 Aligned_cols=23 Identities=26% Similarity=0.398 Sum_probs=15.6
Q ss_pred HcCCCeEEEEeccCcCCcchhhhhcC
Q 019524 187 QLNISRVMIIDLDAHQGNGHEKDFSS 212 (339)
Q Consensus 187 ~~~~~RV~IiD~DvHHGnGTq~if~~ 212 (339)
+.| +||++||.|.. +| ...+|.-
T Consensus 46 ~~G-~rVLLvD~D~~-~~-l~~~lg~ 68 (354)
T 2woj_A 46 QPN-KQFLLISTDPA-HN-LSDAFGE 68 (354)
T ss_dssp CTT-SCEEEEECCSS-CC-HHHHHTS
T ss_pred cCC-CeEEEEECCCC-CC-HHHHhCC
Confidence 445 79999999994 43 4455543
No 122
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=21.08 E-value=3.5e+02 Score=23.73 Aligned_cols=86 Identities=20% Similarity=0.242 Sum_probs=42.3
Q ss_pred CCcEEEEEeeCCCCCCCCcccCCccccccccCCCCChHHHHHHHHHHHHHHHhhcCCCEEEE-------EcCCCCCCCCC
Q 019524 213 DSRVYILDMFNPGIYPRDYEARRFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIY-------NAGTDILEGDP 285 (339)
Q Consensus 213 d~~Vl~iSiH~~~~yP~tg~~~~~~~~NvPL~~g~~d~~yl~a~~~~l~p~~~~f~PdlIvv-------saG~D~~~~Dp 285 (339)
++.|.+|.+... =..+.=+.+.+..+.+.+..+-++-....||+ ++|.|...-..
T Consensus 18 ~~~v~~itlnrp------------------~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~ 79 (267)
T 3oc7_A 18 GGPVARLTLNSP------------------HNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGS 79 (267)
T ss_dssp SSSEEEEEECCG------------------GGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC------
T ss_pred eCCEEEEEecCC------------------CccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhh
Confidence 677887776642 11123355677778777776644333345554 56777654220
Q ss_pred CCCCccCHH-------HHHHHHHHHHHHHhhCCCCEEEEeCC
Q 019524 286 LGMLKISPD-------GIAARDEKTFRFARSRNIPIVMLTSG 320 (339)
Q Consensus 286 lg~~~lt~~-------g~~~~~~~l~~~a~~~~~p~v~vleG 320 (339)
. .+.+ .+......++.....+..|+|+...|
T Consensus 80 --~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G 117 (267)
T 3oc7_A 80 --G--GSPSSAYDMAVERAREMAALMRAIVESRLPVIAAIDG 117 (267)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECS
T ss_pred --c--cCchhhhhhHHHHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 0 1111 12222333444445578899876543
No 123
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=20.69 E-value=60 Score=27.48 Aligned_cols=21 Identities=14% Similarity=0.207 Sum_probs=14.5
Q ss_pred HHHHcCCCeEEEEeccCcCCcchh
Q 019524 184 AFVQLNISRVMIIDLDAHQGNGHE 207 (339)
Q Consensus 184 l~~~~~~~RV~IiD~DvHHGnGTq 207 (339)
++.+.| ||++||+|.. |+.++
T Consensus 24 ~la~~g--~VlliD~D~q-~~~~~ 44 (209)
T 3cwq_A 24 YLALQG--ETLLIDGDPN-RSATG 44 (209)
T ss_dssp HHHTTS--CEEEEEECTT-CHHHH
T ss_pred HHHhcC--CEEEEECCCC-CCHHH
Confidence 334456 9999999975 55543
No 124
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=20.50 E-value=97 Score=27.51 Aligned_cols=29 Identities=17% Similarity=0.111 Sum_probs=17.9
Q ss_pred CCChHHHHHHHHHHHHHHHhhcCCCEEEE
Q 019524 246 GTTTNEYLKKLDEALEVAGHTFDPELVIY 274 (339)
Q Consensus 246 g~~d~~yl~a~~~~l~p~~~~f~PdlIvv 274 (339)
+.=+.+.+..+.+.+..+-++=+...||+
T Consensus 26 Nal~~~~~~~L~~al~~~~~d~~vr~vVl 54 (263)
T 3lke_A 26 NGLDAELGTSLLEAIRAGNNETSIHSIIL 54 (263)
T ss_dssp TBCCHHHHHHHHHHHHHHHHCSSCCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 34466777888888876644333345665
No 125
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=20.36 E-value=1.5e+02 Score=24.75 Aligned_cols=65 Identities=14% Similarity=0.025 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEc---CCCCCCCCCCCCCccCH--HHHHHHHHHHHHHHhhCCCCEEEEe
Q 019524 250 NEYLKKLDEALEVAGHTFDPELVIYNA---GTDILEGDPLGMLKISP--DGIAARDEKTFRFARSRNIPIVMLT 318 (339)
Q Consensus 250 ~~yl~a~~~~l~p~~~~f~PdlIvvsa---G~D~~~~Dplg~~~lt~--~g~~~~~~~l~~~a~~~~~p~v~vl 318 (339)
.+....++. +...+++.+|++||+-. ++|.... |.-+++. +...++.+.+.+++++.+..++++-
T Consensus 102 ~~~~~~~~~-~~~~~~~~~~~lliiD~~~~~~~~~~~---~~~~~~~r~~~~~~~~~~l~~~~~~~~~tvi~~~ 171 (243)
T 1n0w_A 102 DHQTQLLYQ-ASAMMVESRYALLIVDSATALYRTDYS---GRGELSARQMHLARFLRMLLRLADEFGVAVVITN 171 (243)
T ss_dssp HHHHHHHHH-HHHHHHHSCEEEEEEETSSGGGC----------CHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
T ss_pred HHHHHHHHH-HHHHHhcCCceEEEEeCchHHHHHHhc---CCccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 334444433 34455778999999832 2221100 0000111 1255566667788877788777764
No 126
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=20.29 E-value=3e+02 Score=23.72 Aligned_cols=62 Identities=8% Similarity=-0.071 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCCCCCCCCCCccCHHHHHHHHHHHHHH---HhhCCCCEEEEeCCCC
Q 019524 249 TNEYLKKLDEALEVAGHTFDPELVIYNAGTDILEGDPLGMLKISPDGIAARDEKTFRF---ARSRNIPIVMLTSGPI 322 (339)
Q Consensus 249 d~~yl~a~~~~l~p~~~~f~PdlIvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~---a~~~~~p~v~vleGGY 322 (339)
-+..+..+++.+. +.+++..+.|++..|++. -+ +.+.+.++.+.+.++ |++.|++ +.+|--.
T Consensus 97 r~~~~~~~~~~i~-~a~~lG~~~v~~~~G~~~-----~~----~~~~~~~~~~~l~~l~~~a~~~Gv~--l~lE~~~ 161 (290)
T 3tva_A 97 RASRVAEMKEISD-FASWVGCPAIGLHIGFVP-----ES----SSPDYSELVRVTQDLLTHAANHGQA--VHLETGQ 161 (290)
T ss_dssp HHHHHHHHHHHHH-HHHHHTCSEEEECCCCCC-----CT----TSHHHHHHHHHHHHHHHHHHTTTCE--EEEECCS
T ss_pred HHHHHHHHHHHHH-HHHHcCCCEEEEcCCCCc-----cc----chHHHHHHHHHHHHHHHHHHHcCCE--EEEecCC
Confidence 4455667777665 458899999999989653 11 455666655555444 4555654 4456554
No 127
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=20.06 E-value=65 Score=29.98 Aligned_cols=54 Identities=13% Similarity=0.233 Sum_probs=0.0
Q ss_pred hhcCCCEEEEEcCC-CCCC----CCCCCCCccCHHHHHHHHHHHHHHHhhC--CCCEEEEe
Q 019524 265 HTFDPELVIYNAGT-DILE----GDPLGMLKISPDGIAARDEKTFRFARSR--NIPIVMLT 318 (339)
Q Consensus 265 ~~f~PdlIvvsaG~-D~~~----~Dplg~~~lt~~g~~~~~~~l~~~a~~~--~~p~v~vl 318 (339)
..++||+|||..|. |... ++|......+.+.|..--+.+++.+++. +.+++++.
T Consensus 233 ~~~~Pd~VvI~lGtND~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ir~~~p~a~Iil~~ 293 (366)
T 2w9x_A 233 KHWKPQVIVIGLGTNDFSTALNDNERWKTREALHADYVANYVKFVKQLHSNNARAQFILMN 293 (366)
T ss_dssp TTCCCSEEEEECCHHHHSSCCCTTSSCCSHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred ccCCCCEEEEeCccCCCCCCCCCcccccccchHHHHHHHHHHHHHHHHHHHCCCCeEEEEe
Done!