Query 019526
Match_columns 339
No_of_seqs 113 out of 1310
Neff 8.8
Searched_HMMs 13730
Date Mon Mar 25 03:11:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019526.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019526hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1w1oa1 d.58.32.4 (A:246-534) 97.1 0.00083 6E-08 57.5 9.2 35 295-330 253-288 (289)
2 d1wvfa2 d.145.1.1 (A:7-242) Fl 95.6 0.002 1.5E-07 53.9 2.3 35 2-36 172-209 (236)
3 d1uxya1 d.145.1.2 (A:3-200) Ur 94.1 0.027 2E-06 45.4 5.2 50 3-56 128-184 (198)
4 d1e8ga2 d.145.1.1 (A:6-273) Va 94.0 0.0088 6.4E-07 50.9 1.9 33 2-34 188-221 (268)
5 d1e8ga1 d.58.32.1 (A:274-560) 89.7 0.22 1.6E-05 41.9 5.8 39 297-335 241-281 (287)
6 d1wvfa1 d.58.32.1 (A:243-521) 85.0 0.95 6.9E-05 37.6 7.0 37 297-333 239-277 (279)
7 d1f0xa1 d.58.32.2 (A:274-567) 59.2 1.7 0.00012 36.5 1.7 49 5-55 22-77 (294)
8 d1n8va_ a.118.21.1 (A:) Chemos 49.8 2.7 0.0002 29.2 1.2 14 311-324 80-93 (101)
9 d1a0ia1 b.40.4.6 (A:241-349) A 41.1 9.6 0.0007 26.2 2.9 29 5-33 24-55 (109)
10 g1h6w.2 d.231.1.1 (A:328-396,B 35.7 6.8 0.0005 25.7 1.4 20 12-32 33-52 (79)
11 d1bhga1 b.1.4.1 (A:226-328) be 23.0 22 0.0016 23.7 2.4 27 4-30 30-64 (103)
12 d3buxb3 d.93.1.1 (B:264-351) C 20.9 47 0.0034 21.2 3.4 28 8-35 41-68 (88)
13 d2i0ka1 d.58.32.3 (A:274-613) 20.3 21 0.0016 29.0 2.0 22 305-326 312-333 (340)
No 1
>d1w1oa1 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]}
Probab=97.15 E-value=0.00083 Score=57.47 Aligned_cols=35 Identities=29% Similarity=0.496 Sum_probs=30.9
Q ss_pred hcccccccccc-cHHHHHHhHhhcCCCCCCcCCCCCC
Q 019526 295 ASVWGKKYFKN-NFYRLVQVKTMVDPEDFFRNEQSIP 330 (339)
Q Consensus 295 ~~~~~~~y~g~-n~~rL~~lK~kyDP~~vF~~~~~i~ 330 (339)
+++|.+ .||+ .+++.++.|++|||.+++.-.|.|.
T Consensus 253 ~~dW~~-HFG~~kW~~F~~~K~~yDP~~ILsPGQ~IF 288 (289)
T d1w1oa1 253 RSDWVR-HFGAAKWNRFVEMKNKYDPKRLLSPGQDIF 288 (289)
T ss_dssp HHHHHH-HHCHHHHHHHHHHHHHHCTTCCBCGGGCSC
T ss_pred HHHHHH-HcCcchHHHHHHHHhhCCcccccCCCCccC
Confidence 458975 6785 7999999999999999999999986
No 2
>d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}
Probab=95.64 E-value=0.002 Score=53.94 Aligned_cols=35 Identities=11% Similarity=0.021 Sum_probs=27.3
Q ss_pred ccceEEEEEEEcCCCcEE-e--cCCCCchhHHHHhhcC
Q 019526 2 AADHIVDAHMIDAKGRFL-T--RESMGEDLFWAIRGSG 36 (339)
Q Consensus 2 a~D~vl~~~VV~adG~iv-~--~~~~n~DLfWAlRGgG 36 (339)
.+|+|+++||||+||+|+ . ...+|.++|+..|++-
T Consensus 172 ~~d~v~~levVl~~G~iv~~~~~~~~~~~~~~~~~~~~ 209 (236)
T d1wvfa2 172 HFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGY 209 (236)
T ss_dssp GGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCS
T ss_pred cccceeeeEEEcCCCcEEEeCCccCCCccHHHHHhcCc
Confidence 579999999999999999 3 3345667777776664
No 3
>d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=94.15 E-value=0.027 Score=45.41 Aligned_cols=50 Identities=12% Similarity=0.068 Sum_probs=40.2
Q ss_pred cceEEEEEEEc-CCCcEEe-cCCCCchhHHHHhh-----cCCCCeEEEEEEEEEeeecCCe
Q 019526 3 ADHIVDAHMID-AKGRFLT-RESMGEDLFWAIRG-----SGGSSFGIIVSWKIKLVAVPPT 56 (339)
Q Consensus 3 ~D~vl~~~VV~-adG~iv~-~~~~n~DLfWAlRG-----gGg~nFGIVt~~~~k~~p~~~~ 56 (339)
.|.|.++++|+ .||+++. + +.||.|+-|. .. ...+|||+.+||+.|.++.
T Consensus 128 ~~~l~~V~~v~~~~G~~~~~~---~~e~~f~YR~S~f~~~~-~~~~iIl~a~f~L~~~~~~ 184 (198)
T d1uxya1 128 QRVCAYVDSVELATGKQVRLT---AKECRFGYRDSIFKHEY-QDRFAIVAVGLRLPKEWQP 184 (198)
T ss_dssp GGTEEEEEEEETTTTEEEEEE---TGGGTCBTTBCGGGTTT-TTTEEEEEEEEEEESSCCC
T ss_pred hhceeeeEEEecCCCcEEEEe---ccccceecccccccccC-CCCEEEEEEEEEECCCCCc
Confidence 58899999885 8999994 3 5689998773 33 4578999999999998764
No 4
>d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}
Probab=93.99 E-value=0.0088 Score=50.89 Aligned_cols=33 Identities=15% Similarity=-0.093 Sum_probs=24.3
Q ss_pred ccceEEEEEEEcCCCcEE-ecCCCCchhHHHHhh
Q 019526 2 AADHIVDAHMIDAKGRFL-TRESMGEDLFWAIRG 34 (339)
Q Consensus 2 a~D~vl~~~VV~adG~iv-~~~~~n~DLfWAlRG 34 (339)
++|+|+++||||+||+|+ +.....+++++....
T Consensus 188 ~~d~v~~~~vV~~~G~iv~~g~~~~~~~~~~~~~ 221 (268)
T d1e8ga2 188 HWMMHSGMEVVLANGELLRTGMGALPDPKRPETM 221 (268)
T ss_dssp TGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGT
T ss_pred hhcccccEEEEeCCCcEEEeCCccccchhhhhhc
Confidence 579999999999999999 444445555544433
No 5
>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}
Probab=89.72 E-value=0.22 Score=41.87 Aligned_cols=39 Identities=13% Similarity=0.125 Sum_probs=27.9
Q ss_pred cccccccccc-HHHHHHhHhhcCCCCCCcCCC-CCCCCCCC
Q 019526 297 VWGKKYFKNN-FYRLVQVKTMVDPEDFFRNEQ-SIPPFNLM 335 (339)
Q Consensus 297 ~~~~~y~g~n-~~rL~~lK~kyDP~~vF~~~~-~i~~~~~~ 335 (339)
.|....+|+. +.-+++||+.+||+|+|+... +|-|.+-.
T Consensus 241 ~~~~~~~~~~~~~l~~~iK~a~DP~gIlNPGK~gi~p~~~~ 281 (287)
T d1e8ga1 241 METYNWNNSSFLRFNEVLKNAVDPNGIIAPGKSGVWPSQYS 281 (287)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHCTTCCBCTTGGGCCCTTSC
T ss_pred HHHHhhcCHHHHHHHHHHHHHhCCCcCCCCCCCCCCCcccc
Confidence 3444455544 577789999999999998775 57666543
No 6
>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}
Probab=84.97 E-value=0.95 Score=37.60 Aligned_cols=37 Identities=16% Similarity=0.103 Sum_probs=27.4
Q ss_pred ccccccccc-cHHHHHHhHhhcCCCCCCcC-CCCCCCCC
Q 019526 297 VWGKKYFKN-NFYRLVQVKTMVDPEDFFRN-EQSIPPFN 333 (339)
Q Consensus 297 ~~~~~y~g~-n~~rL~~lK~kyDP~~vF~~-~~~i~~~~ 333 (339)
.|-...+|+ .++-+++||+.+||+|+++. -++|.+.+
T Consensus 239 ~~l~~~~g~~~~~lm~~iK~alDP~~IlNPGK~Gi~~~~ 277 (279)
T d1wvfa1 239 DRVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSGIDLNN 277 (279)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGGGCCTTS
T ss_pred HHHHHHhCHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCC
Confidence 454556675 46778999999999999975 55666554
No 7
>d1f0xa1 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=59.17 E-value=1.7 Score=36.53 Aligned_cols=49 Identities=18% Similarity=0.193 Sum_probs=12.9
Q ss_pred eEEEEEEEcCC-CcEEe------cCCCCchhHHHHhhcCCCCeEEEEEEEEEeeecCC
Q 019526 5 HIVDAHMIDAK-GRFLT------RESMGEDLFWAIRGSGGSSFGIIVSWKIKLVAVPP 55 (339)
Q Consensus 5 ~vl~~~VV~ad-G~iv~------~~~~n~DLfWAlRGgGg~nFGIVt~~~~k~~p~~~ 55 (339)
+|++..+++++ |++++ .+..--|+|+.+ |.= |.-||||.+++|.++.+.
T Consensus 22 ~vL~~~~~LP~sGE~~h~~~~~~~~~~G~dt~l~I-gse-GT~~i~t~~~lK~~~~~~ 77 (294)
T d1f0xa1 22 HILANFENLPVAGEYMHRDIYDIAEKYGKDTFLMI-DKL-GTDKMPFFFNLKGRTDAM 77 (294)
T ss_dssp HHHHHCSSCCSEEEEEEHHHHHHHC---------------------------------
T ss_pred HHHhccccCCcceeeeccchhHHHHHHhHHHHHHH-HHh-cccchHHHHHHHhhhhHH
Confidence 56777788885 99983 233456899776 553 578999999999997654
No 8
>d1n8va_ a.118.21.1 (A:) Chemosensory protein Csp2 {Cabbage moth (Mamestra brassicae) [TaxId: 55057]}
Probab=49.81 E-value=2.7 Score=29.20 Aligned_cols=14 Identities=21% Similarity=0.411 Sum_probs=12.0
Q ss_pred HHhHhhcCCCCCCc
Q 019526 311 VQVKTMVDPEDFFR 324 (339)
Q Consensus 311 ~~lK~kyDP~~vF~ 324 (339)
.+|.++|||+|.++
T Consensus 80 ~~l~~KYDP~g~y~ 93 (101)
T d1n8va_ 80 RELTAKYDPTGNWR 93 (101)
T ss_dssp HHHHHHHCTTCSSH
T ss_pred HHHHHHHCcCchHH
Confidence 67899999999875
No 9
>d1a0ia1 b.40.4.6 (A:241-349) ATP-dependent DNA ligase {Bacteriophage T7 [TaxId: 10760]}
Probab=41.11 E-value=9.6 Score=26.18 Aligned_cols=29 Identities=14% Similarity=0.202 Sum_probs=22.1
Q ss_pred eEEEEEEEcCCCcEE-ecC--CCCchhHHHHh
Q 019526 5 HIVDAHMIDAKGRFL-TRE--SMGEDLFWAIR 33 (339)
Q Consensus 5 ~vl~~~VV~adG~iv-~~~--~~n~DLfWAlR 33 (339)
.|++++|.+-||.+| ++. .+--|.|||-.
T Consensus 24 kViGf~VlLE~G~vV~A~gis~~lmdefT~~v 55 (109)
T d1a0ia1 24 KVIGFEVLLESGRLVNATNISRALMDEFTETV 55 (109)
T ss_dssp SCCEEEEECTTSCEEEEBCCCSHHHHHHHHHH
T ss_pred cEEEEEEEecCCcEEeccccCHHHHHHHHHhh
Confidence 478999999999999 542 23358999763
No 10
>g1h6w.2 d.231.1.1 (A:328-396,B:518-527) Receptor-binding domain of short tail fibre protein gp12 {Bacteriophage T4 [TaxId: 10665]}
Probab=35.72 E-value=6.8 Score=25.68 Aligned_cols=20 Identities=15% Similarity=-0.140 Sum_probs=14.8
Q ss_pred EcCCCcEEecCCCCchhHHHH
Q 019526 12 IDAKGRFLTRESMGEDLFWAI 32 (339)
Q Consensus 12 V~adG~iv~~~~~n~DLfWAl 32 (339)
+++||+.+. .+++|+||=+|
T Consensus 33 l~CdG~~l~-~~~Yp~Lf~~I 52 (79)
T g1h6w.2 33 RFCHGGTVS-ASDCPLYASRI 52 (79)
T ss_dssp EESBSCBCC-TTTCHHHHHHH
T ss_pred EeeCCeeCC-HhHCHHHHHHh
Confidence 456777774 35799999998
No 11
>d1bhga1 b.1.4.1 (A:226-328) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.98 E-value=22 Score=23.70 Aligned_cols=27 Identities=19% Similarity=0.514 Sum_probs=19.3
Q ss_pred ceEEEEEEEcCCCcEEecC--------CCCchhHH
Q 019526 4 DHIVDAHMIDAKGRFLTRE--------SMGEDLFW 30 (339)
Q Consensus 4 D~vl~~~VV~adG~iv~~~--------~~n~DLfW 30 (339)
+.-++++|..++|+++.+. -.||.|+|
T Consensus 30 ~~~~~v~l~d~~g~~v~~~~~~~~~~~v~~p~LW~ 64 (103)
T d1bhga1 30 LFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWW 64 (103)
T ss_dssp CEEEEEEEECSSSCEEEEECSSEECCCCTTCCCCC
T ss_pred CcEEEEEEECCCCCEEEEeccceEEEEeCCccccC
Confidence 3457889999999999321 25777776
No 12
>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.92 E-value=47 Score=21.20 Aligned_cols=28 Identities=21% Similarity=0.286 Sum_probs=21.4
Q ss_pred EEEEEcCCCcEEecCCCCchhHHHHhhc
Q 019526 8 DAHMIDAKGRFLTRESMGEDLFWAIRGS 35 (339)
Q Consensus 8 ~~~VV~adG~iv~~~~~n~DLfWAlRGg 35 (339)
++--|+.||+|+-.-.+|.-|+-||--|
T Consensus 41 AIGyvt~dg~IlQTIp~nk~L~qaLidG 68 (88)
T d3buxb3 41 AIGYVTADGNILQTIPHNKPLFQALIDG 68 (88)
T ss_dssp EEEEECTTSCEEEECCSSCCHHHHHHHH
T ss_pred eeeeeccCCceeeeccCccHHHHHHHhc
Confidence 4567999999994356788899888544
No 13
>d2i0ka1 d.58.32.3 (A:274-613) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]}
Probab=20.34 E-value=21 Score=29.00 Aligned_cols=22 Identities=23% Similarity=0.345 Sum_probs=19.3
Q ss_pred ccHHHHHHhHhhcCCCCCCcCC
Q 019526 305 NNFYRLVQVKTMVDPEDFFRNE 326 (339)
Q Consensus 305 ~n~~rL~~lK~kyDP~~vF~~~ 326 (339)
+|++.-++.-.+|||++||+++
T Consensus 312 ~~Wd~A~~~l~~~Dp~rvFss~ 333 (340)
T d2i0ka1 312 ENWDTARARYNQIDPHRVFTNG 333 (340)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHhccCchhhhcch
Confidence 6788888888999999999874
Done!