Query 019529
Match_columns 339
No_of_seqs 202 out of 1040
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 03:13:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019529.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019529hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gla_A Low molecular weight he 99.9 2.3E-23 7.9E-28 166.8 12.8 87 23-114 2-99 (100)
2 4fei_A Heat shock protein-rela 99.9 4.9E-23 1.7E-27 166.7 13.6 91 22-117 3-99 (102)
3 2wj5_A Heat shock protein beta 99.9 3.4E-21 1.2E-25 156.2 11.4 89 27-120 3-96 (101)
4 4eld_A MJ16.5-P1, small heat s 99.8 6E-21 2E-25 165.7 12.7 92 23-120 55-158 (161)
5 3l1e_A Alpha-crystallin A chai 99.8 9.2E-21 3.1E-25 155.1 12.3 86 26-116 3-93 (106)
6 3aab_A Putative uncharacterize 99.8 6.2E-21 2.1E-25 158.8 11.3 88 23-116 22-119 (123)
7 3q9p_A Heat shock protein beta 99.8 1E-20 3.5E-25 149.1 11.0 78 30-112 2-84 (85)
8 1gme_A Heat shock protein 16.9 99.8 9.2E-21 3.1E-25 163.8 11.2 90 24-117 42-142 (151)
9 2y1y_A Alpha-crystallin B chai 99.8 1.1E-19 3.6E-24 144.3 9.5 82 32-118 3-89 (90)
10 2klr_A Alpha-crystallin B chai 99.8 1.4E-18 4.7E-23 154.5 8.6 84 28-116 66-154 (175)
11 2bol_A TSP36, small heat shock 99.7 3.4E-18 1.1E-22 164.4 11.4 88 24-116 97-192 (314)
12 2bol_A TSP36, small heat shock 99.7 2.3E-16 7.7E-21 151.7 10.4 82 26-112 221-313 (314)
13 1rl1_A Suppressor of G2 allele 98.9 6.9E-09 2.4E-13 84.4 9.4 83 24-115 8-90 (114)
14 2xcm_C SGT1-like protein, cyto 98.9 6E-09 2E-13 81.1 7.9 81 25-114 2-82 (92)
15 2k8q_A Protein SHQ1; beta-sand 97.8 3.9E-05 1.3E-09 66.1 7.4 82 24-119 2-88 (134)
16 3eud_A Protein SHQ1; CS domain 97.6 0.00058 2E-08 57.5 11.3 83 22-118 14-101 (115)
17 1x5m_A Calcyclin-binding prote 97.5 0.00099 3.4E-08 55.4 11.5 87 20-115 15-105 (127)
18 3igf_A ALL4481 protein; two-do 97.4 0.00019 6.5E-09 70.1 6.4 70 26-111 298-368 (374)
19 1wh0_A Ubiquitin carboxyl-term 97.2 0.002 6.7E-08 54.8 9.8 90 20-114 14-112 (134)
20 1wgv_A KIAA1068 protein; CS do 97.1 0.0057 2E-07 50.5 11.7 82 24-114 18-102 (124)
21 1ejf_A Progesterone receptor P 97.0 0.0038 1.3E-07 51.8 9.3 79 26-114 3-82 (125)
22 2o30_A Nuclear movement protei 96.9 0.0049 1.7E-07 51.5 9.7 75 25-112 4-79 (131)
23 3qor_A Nuclear migration prote 96.7 0.0058 2E-07 50.5 8.5 79 24-114 15-97 (121)
24 1wfi_A Nuclear distribution ge 96.7 0.0036 1.2E-07 52.2 6.9 79 24-114 6-88 (131)
25 2rh0_A NUDC domain-containing 96.5 0.016 5.6E-07 50.1 10.3 79 23-114 11-91 (157)
26 2cg9_X CO-chaperone protein SB 96.5 0.0018 6.2E-08 54.6 3.9 84 24-114 5-98 (134)
27 2kmw_A Uncharacterized protein 96.4 0.0091 3.1E-07 51.5 7.9 81 24-115 3-83 (150)
28 3q9p_A Heat shock protein beta 66.6 8.9 0.0003 29.2 5.0 34 79-113 7-40 (85)
29 2y1y_A Alpha-crystallin B chai 57.0 14 0.00049 28.1 4.7 33 79-112 6-38 (90)
30 3gla_A Low molecular weight he 55.7 16 0.00055 28.0 4.8 34 79-113 14-47 (100)
31 4e6f_A Uncharacterized protein 55.4 13 0.00045 33.3 4.7 73 36-116 26-119 (181)
32 2wj5_A Heat shock protein beta 55.3 15 0.00053 28.7 4.7 33 79-112 11-43 (101)
33 3l1e_A Alpha-crystallin A chai 54.2 18 0.00061 28.6 4.9 32 79-111 12-43 (106)
34 4fei_A Heat shock protein-rela 53.6 18 0.00061 28.2 4.7 33 79-112 16-48 (102)
35 2lk9_A Bone marrow stromal ant 50.1 1.4 4.7E-05 29.8 -1.9 22 310-331 4-26 (35)
36 3aab_A Putative uncharacterize 41.5 49 0.0017 26.4 5.7 34 80-114 35-69 (123)
37 4eld_A MJ16.5-P1, small heat s 40.3 45 0.0016 28.0 5.6 34 79-113 66-99 (161)
38 2klr_A Alpha-crystallin B chai 32.8 47 0.0016 28.8 4.5 33 79-112 73-105 (175)
39 1ew4_A CYAY protein; friedreic 32.7 28 0.00097 28.2 2.9 16 95-110 29-44 (106)
40 2cql_A OK/SW-CL.103, 60S ribos 30.5 73 0.0025 25.4 5.0 46 48-111 20-68 (100)
41 1rl6_A Protein (ribosomal prot 27.5 1E+02 0.0036 27.0 5.9 46 48-112 11-56 (177)
42 3oeq_A Frataxin homolog, mitoc 27.1 44 0.0015 28.0 3.2 16 96-111 49-64 (123)
43 1gme_A Heat shock protein 16.9 25.7 97 0.0033 25.8 5.2 34 80-114 54-88 (151)
44 3j21_F 50S ribosomal protein L 25.1 87 0.003 27.7 4.9 49 39-109 9-57 (184)
45 1vq8_E 50S ribosomal protein L 24.5 1.2E+02 0.0041 26.7 5.7 47 48-112 9-55 (178)
46 1nkw_E 50S ribosomal protein L 23.9 1.4E+02 0.0048 27.1 6.2 46 48-112 39-84 (212)
47 3qqz_A Putative uncharacterize 20.0 2E+02 0.0069 26.0 6.4 62 42-108 21-86 (255)
No 1
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.90 E-value=2.3e-23 Score=166.78 Aligned_cols=87 Identities=29% Similarity=0.499 Sum_probs=78.6
Q ss_pred cCCCceeEEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecC-----------CCceeEEEEEEECCCCC
Q 019529 23 NFKPKSEWKHEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLA-----------GGRWNQFSELYKIPETC 91 (339)
Q Consensus 23 ~f~P~vDI~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e-----------~~~~g~F~R~f~LPe~V 91 (339)
.|.|++||++++++|+|.++||||+++||+|. ++ ++.|+|+|++... +..+|+|.|+|.||.+|
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~---~~--~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~v 76 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQ---MD--KGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSA 76 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEE---EE--TTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTB
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEE---EE--CCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCc
Confidence 59999999999999999999999999999999 54 7899999998753 12578999999999999
Q ss_pred CcCceeEEEeCCEEEEEeecCCC
Q 019529 92 DINNINSVFQGGVLTIIMPKIKN 114 (339)
Q Consensus 92 D~d~IkAsfenGVLtItlPK~~~ 114 (339)
|.++|+|+|+||||+|+|||.+.
T Consensus 77 d~~~i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 77 DADGITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CTTSCEEEEETTEEEEEEEBC--
T ss_pred ChHHeEEEEeCCEEEEEEecCCC
Confidence 99999999999999999999864
No 2
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.90 E-value=4.9e-23 Score=166.70 Aligned_cols=91 Identities=23% Similarity=0.384 Sum_probs=82.6
Q ss_pred ccCCCceeEEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecCC------CceeEEEEEEECCCCCCcCc
Q 019529 22 ENFKPKSEWKHEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLAG------GRWNQFSELYKIPETCDINN 95 (339)
Q Consensus 22 e~f~P~vDI~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e~------~~~g~F~R~f~LPe~VD~d~ 95 (339)
..|.|++||+++++.|+|.++||||+++||+|. ++ ++.|+|+|++...+ ..+|.|.|+|.||.+||.+.
T Consensus 3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~---~~--~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~ 77 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALA---ED--GGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPAS 77 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEECTTCCGGGCEEE---EE--TTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTC
T ss_pred CcccCcEEEEEcCCEEEEEEECCCCchHhEEEE---EE--CCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhH
Confidence 368999999999999999999999999999999 64 79999999996542 36789999999999999999
Q ss_pred eeEEEeCCEEEEEeecCCCCCc
Q 019529 96 INSVFQGGVLTIIMPKIKNNAQ 117 (339)
Q Consensus 96 IkAsfenGVLtItlPK~~~~~p 117 (339)
|+|+|+||||+|+|||..+...
T Consensus 78 i~A~~~~GvL~I~lpK~~~~~d 99 (102)
T 4fei_A 78 GVASLAGGVLTVRFEKLRPTID 99 (102)
T ss_dssp CEEEEETTEEEEEEEBSSCCCC
T ss_pred cEEEEECCEEEEEEEccCcccc
Confidence 9999999999999999886654
No 3
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.85 E-value=3.4e-21 Score=156.22 Aligned_cols=89 Identities=20% Similarity=0.234 Sum_probs=79.0
Q ss_pred ceeEEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecC--CC--ceeEEEEEEECCCCCCcCceeEEE-e
Q 019529 27 KSEWKHEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLA--GG--RWNQFSELYKIPETCDINNINSVF-Q 101 (339)
Q Consensus 27 ~vDI~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e--~~--~~g~F~R~f~LPe~VD~d~IkAsf-e 101 (339)
.+||+++++.|+|.++||||+++||+|. ++ ++.|+|+|++... +. .++.|+|+|.||.+||.++|+|+| .
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~---v~--~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~ 77 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVK---VV--GDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSP 77 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEE---EE--TTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECT
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEE---EE--CCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECC
Confidence 5899999999999999999999999999 54 6899999998753 22 335699999999999999999999 7
Q ss_pred CCEEEEEeecCCCCCcccc
Q 019529 102 GGVLTIIMPKIKNNAQKDA 120 (339)
Q Consensus 102 nGVLtItlPK~~~~~pr~~ 120 (339)
||||+|++||....+++++
T Consensus 78 nGvL~I~lPK~~~~~~~~~ 96 (101)
T 2wj5_A 78 EGVLSIQATPASAQASLPS 96 (101)
T ss_dssp TSEEEEEECBCCCCCSSCC
T ss_pred CCEEEEEEECCCcCCCCCC
Confidence 9999999999988777664
No 4
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.85 E-value=6e-21 Score=165.73 Aligned_cols=92 Identities=25% Similarity=0.402 Sum_probs=81.5
Q ss_pred cCCCceeEEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecC----C-------C-ceeEEEEEEECCCC
Q 019529 23 NFKPKSEWKHEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLA----G-------G-RWNQFSELYKIPET 90 (339)
Q Consensus 23 ~f~P~vDI~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e----~-------~-~~g~F~R~f~LPe~ 90 (339)
.|.| +||++++++|+|.++||||+++||+|. ++ ++.|+|+|++... + . .||.|.|+|.||.+
T Consensus 55 ~~~p-vdi~e~~~~~~v~~dlPG~~~edi~V~---~~--~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~ 128 (161)
T 4eld_A 55 GFMP-ISIIEGDQHIKVIAWLPGVNKEDIILN---AV--GDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPAT 128 (161)
T ss_dssp SCCC-EEEEECSSEEEEEEECTTCCGGGEEEE---EE--TTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSC
T ss_pred cccc-eeEEEeCCEEEEEEECCCCChHhEEEE---EE--CCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCC
Confidence 3555 999999999999999999999999999 64 7899999998762 1 2 57899999999999
Q ss_pred CCcCceeEEEeCCEEEEEeecCCCCCcccc
Q 019529 91 CDINNINSVFQGGVLTIIMPKIKNNAQKDA 120 (339)
Q Consensus 91 VD~d~IkAsfenGVLtItlPK~~~~~pr~~ 120 (339)
||.++|+|+|+||||+|+|||....+++.+
T Consensus 129 vd~~~i~A~~~nGvL~I~lpK~~~~~~r~I 158 (161)
T 4eld_A 129 VKEENASAKFENGVLSVILPKAESSIKKGI 158 (161)
T ss_dssp BCGGGCEEEEETTEEEEEEEBCGGGSCCCC
T ss_pred cccccEEEEEECCEEEEEEEcCCCCCCcEe
Confidence 999999999999999999999887766554
No 5
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.84 E-value=9.2e-21 Score=155.11 Aligned_cols=86 Identities=21% Similarity=0.360 Sum_probs=76.4
Q ss_pred CceeEEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecC--CC--ceeEEEEEEECCCCCCcCceeEEE-
Q 019529 26 PKSEWKHEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLA--GG--RWNQFSELYKIPETCDINNINSVF- 100 (339)
Q Consensus 26 P~vDI~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e--~~--~~g~F~R~f~LPe~VD~d~IkAsf- 100 (339)
+..||+++++.|+|.+|||||+++||+|. ++ ++.|+|+|++... +. .++.|.|+|.||.+||.++|+|+|
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~---v~--~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s 77 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVK---VQ--EDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLS 77 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEE---EE--TTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEEC
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEE---EE--CCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEEC
Confidence 46899999999999999999999999999 64 7999999987642 22 346799999999999999999999
Q ss_pred eCCEEEEEeecCCCCC
Q 019529 101 QGGVLTIIMPKIKNNA 116 (339)
Q Consensus 101 enGVLtItlPK~~~~~ 116 (339)
+||||+|+|||..+..
T Consensus 78 ~~GvL~I~~PK~~~~~ 93 (106)
T 3l1e_A 78 ADGMLTFSGPKIPSGV 93 (106)
T ss_dssp TTSEEEEEEEBCCCCT
T ss_pred CCCEEEEEEEccCccc
Confidence 8999999999998763
No 6
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.84 E-value=6.2e-21 Score=158.80 Aligned_cols=88 Identities=23% Similarity=0.326 Sum_probs=78.4
Q ss_pred cCCCceeEEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCC-CEEEEEEEeecCC--------CceeEEEEEEECCCCCCc
Q 019529 23 NFKPKSEWKHEDDASILLVYLPGFVKEQIKVMNTYVDNIT-LSLKVEGRRPLAG--------GRWNQFSELYKIPETCDI 93 (339)
Q Consensus 23 ~f~P~vDI~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~-~~L~IsGER~~e~--------~~~g~F~R~f~LPe~VD~ 93 (339)
.+.|++||++++++|+|.++||||+++||+|. ++ + +.|+|+|++.... ..+ +|.|+|.||.+||.
T Consensus 22 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~---v~--~~~~L~I~g~~~~~~~~~~~~~Er~~-~f~R~~~LP~~vd~ 95 (123)
T 3aab_A 22 LVYPPVDMYEEGGYLVVVADLAGFNKEKIKAR---VS--GQNELIIEAEREITEPGVKYLTQRPK-YVRKVIRLPYNVAK 95 (123)
T ss_dssp HHCSCEEEEEETTEEEEEEECCSCCGGGCEEE---EE--TTTEEEEEEECCCCCCSCEEEECSCS-EEEEEEECSSEECT
T ss_pred cCCCcEEEEEcCCEEEEEEECCCCCHHHEEEE---Ee--CCCEEEEEEEEeccCCCeEEEEEEeE-EEEEEEECCCCcCc
Confidence 45699999999999999999999999999999 54 6 9999999987542 234 89999999999999
Q ss_pred Cce-eEEEeCCEEEEEeecCCCCC
Q 019529 94 NNI-NSVFQGGVLTIIMPKIKNNA 116 (339)
Q Consensus 94 d~I-kAsfenGVLtItlPK~~~~~ 116 (339)
++| +|+|+||||+|+|||....+
T Consensus 96 ~~i~~A~~~~GvL~I~lPK~~~~~ 119 (123)
T 3aab_A 96 DAEISGKYENGVLTIRIPIAGTSV 119 (123)
T ss_dssp TCCCEEEEETTEEEEEEEGGGEEC
T ss_pred chhCeeEEcCCEEEEEEEcCCCCc
Confidence 999 99999999999999987543
No 7
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.84 E-value=1e-20 Score=149.06 Aligned_cols=78 Identities=19% Similarity=0.293 Sum_probs=68.8
Q ss_pred EEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecC----CCceeEEEEEEECCCCCCcCceeEEEe-CCE
Q 019529 30 WKHEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLA----GGRWNQFSELYKIPETCDINNINSVFQ-GGV 104 (339)
Q Consensus 30 I~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e----~~~~g~F~R~f~LPe~VD~d~IkAsfe-nGV 104 (339)
+.|++++|+|.++||||+++||+|. ++ ++.|+|+|++... +..+++|.|+|.||.+||.++|+|+|. |||
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~---v~--~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~Gv 76 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVK---TK--DGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGT 76 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEE---EE--TTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEE---EE--CCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCE
Confidence 4689999999999999999999999 64 7899999998753 224689999999999999999999998 999
Q ss_pred EEEEeecC
Q 019529 105 LTIIMPKI 112 (339)
Q Consensus 105 LtItlPK~ 112 (339)
|+|++||.
T Consensus 77 L~I~lPK~ 84 (85)
T 3q9p_A 77 LTVEAPMP 84 (85)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 99999995
No 8
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.84 E-value=9.2e-21 Score=163.82 Aligned_cols=90 Identities=26% Similarity=0.461 Sum_probs=79.9
Q ss_pred CCCceeEEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecC----C-------CceeEEEEEEECCCCCC
Q 019529 24 FKPKSEWKHEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLA----G-------GRWNQFSELYKIPETCD 92 (339)
Q Consensus 24 f~P~vDI~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e----~-------~~~g~F~R~f~LPe~VD 92 (339)
|.|++||++++++|+|.++||||+++||+|. + .+++.|+|+|++... + ..+|.|.|+|.||.+||
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~---v-~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd 117 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVE---V-EDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAK 117 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEE---E-ETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCC
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEE---E-ecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCcc
Confidence 5699999999999999999999999999999 5 227899999998753 1 24688999999999999
Q ss_pred cCceeEEEeCCEEEEEeecCCCCCc
Q 019529 93 INNINSVFQGGVLTIIMPKIKNNAQ 117 (339)
Q Consensus 93 ~d~IkAsfenGVLtItlPK~~~~~p 117 (339)
.++|+|+|+||||+|+|||.....+
T Consensus 118 ~~~i~A~~~nGvL~I~lPK~~~~~~ 142 (151)
T 1gme_A 118 VEEVKAGLENGVLTVTVPKAEVKKP 142 (151)
T ss_dssp GGGCEEEEETTEEEEEEECCCCCTT
T ss_pred ccceEEEEECCEEEEEEEccCcCCC
Confidence 9999999999999999999886654
No 9
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.80 E-value=1.1e-19 Score=144.25 Aligned_cols=82 Identities=26% Similarity=0.316 Sum_probs=65.7
Q ss_pred EcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecC--CC--ceeEEEEEEECCCCCCcCceeEEE-eCCEEE
Q 019529 32 HEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLA--GG--RWNQFSELYKIPETCDINNINSVF-QGGVLT 106 (339)
Q Consensus 32 Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e--~~--~~g~F~R~f~LPe~VD~d~IkAsf-enGVLt 106 (339)
++++.|+|.++||||+++||+|. ++ ++.|+|+|++... +. .++.|.|+|.||.+||.++|+|+| .||||+
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~---v~--~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~ 77 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVK---VL--GDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLT 77 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEE---EE--TTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEE
T ss_pred cCCCEEEEEEECCCCcHHHeEEE---EE--CCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEE
Confidence 67899999999999999999999 54 6899999998653 22 235799999999999999999999 899999
Q ss_pred EEeecCCCCCcc
Q 019529 107 IIMPKIKNNAQK 118 (339)
Q Consensus 107 ItlPK~~~~~pr 118 (339)
|+|||....+|+
T Consensus 78 I~~pK~~~~~p~ 89 (90)
T 2y1y_A 78 VNGPRKQVSGPE 89 (90)
T ss_dssp EEECBC------
T ss_pred EEEEcCCCCCCC
Confidence 999998877665
No 10
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.75 E-value=1.4e-18 Score=154.49 Aligned_cols=84 Identities=27% Similarity=0.333 Sum_probs=69.4
Q ss_pred eeEEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecC--CC--ceeEEEEEEECCCCCCcCceeEEE-eC
Q 019529 28 SEWKHEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLA--GG--RWNQFSELYKIPETCDINNINSVF-QG 102 (339)
Q Consensus 28 vDI~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e--~~--~~g~F~R~f~LPe~VD~d~IkAsf-en 102 (339)
+||+++++.|+|.+|||||+++||+|. ++ ++.|+|+|++... +. .++.|.|+|.||.+||.++|+|+| +|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~---v~--~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~d 140 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVK---VL--GDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSD 140 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEE---EE--TTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTT
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEE---EE--CCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCC
Confidence 699999999999999999999999999 54 6899999998643 22 235799999999999999999999 79
Q ss_pred CEEEEEeecCCCCC
Q 019529 103 GVLTIIMPKIKNNA 116 (339)
Q Consensus 103 GVLtItlPK~~~~~ 116 (339)
|||+|++||.....
T Consensus 141 GvL~I~lPK~~~~~ 154 (175)
T 2klr_A 141 GVLTVNGPRKQVSG 154 (175)
T ss_dssp SCEEEEEECC----
T ss_pred CEEEEEEECCCCCC
Confidence 99999999986543
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.75 E-value=3.4e-18 Score=164.39 Aligned_cols=88 Identities=18% Similarity=0.214 Sum_probs=80.1
Q ss_pred CCCceeEEEcCC----EEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecC---CCceeEEEEEEECCCCCCcCce
Q 019529 24 FKPKSEWKHEDD----ASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLA---GGRWNQFSELYKIPETCDINNI 96 (339)
Q Consensus 24 f~P~vDI~Etdd----~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e---~~~~g~F~R~f~LPe~VD~d~I 96 (339)
|.|++||+++++ +|+|.++||||+++||+|. ++ ++.|+|+|++... +..+++|.|+|.||.+||.++|
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~---v~--~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i 171 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIK---AD--KNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHI 171 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEE---EE--TTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGC
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEE---EE--CCEEEEEEEEeccCCCCEEEEEEEEEEECCCCcccccc
Confidence 568999999999 9999999999999999999 64 7999999998754 3468999999999999999999
Q ss_pred eEEEe-CCEEEEEeecCCCCC
Q 019529 97 NSVFQ-GGVLTIIMPKIKNNA 116 (339)
Q Consensus 97 kAsfe-nGVLtItlPK~~~~~ 116 (339)
+|+|+ ||||+|+|||..+..
T Consensus 172 ~A~~~~nGVL~I~lPK~~~~~ 192 (314)
T 2bol_A 172 QATITTDDVLVIEAPVNEPNY 192 (314)
T ss_dssp EEEECSSSEEEEEEEBSSCCT
T ss_pred EEEEeCCCEEEEEEeccCccc
Confidence 99999 999999999987653
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.66 E-value=2.3e-16 Score=151.71 Aligned_cols=82 Identities=17% Similarity=0.260 Sum_probs=69.9
Q ss_pred CceeEEEcC---CEEEEEEEc-CCCCCCCeEEEeeEEeCCCCEEEEEEEeecC-------CCceeEEEEEEECCCCCCcC
Q 019529 26 PKSEWKHED---DASILLVYL-PGFVKEQIKVMNTYVDNITLSLKVEGRRPLA-------GGRWNQFSELYKIPETCDIN 94 (339)
Q Consensus 26 P~vDI~Etd---d~yiL~vDL-PGfkKEDIkV~is~VD~~~~~L~IsGER~~e-------~~~~g~F~R~f~LPe~VD~d 94 (339)
..++|++++ +.|.|.++| |||+++||+|. ++ ++.|+|+|+|... +..||.|+|+|.||++||.+
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~---v~--~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~ 295 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVW---AK--GNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDAS 295 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEE---ES--SSEEEEEEEEC------------CEEEEEEEECSSEECGG
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEE---EE--CCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChH
Confidence 346777754 689999999 99999999999 64 7999999998754 23689999999999999999
Q ss_pred ceeEEEeCCEEEEEeecC
Q 019529 95 NINSVFQGGVLTIIMPKI 112 (339)
Q Consensus 95 ~IkAsfenGVLtItlPK~ 112 (339)
+|+|+|+||||+|++||.
T Consensus 296 ~i~A~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 296 KTQAEIVDGLMVVEAPLF 313 (314)
T ss_dssp GCEEEEETTEEEEEEEEE
T ss_pred HeEEEEeCCEEEEEEecC
Confidence 999999999999999986
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.89 E-value=6.9e-09 Score=84.37 Aligned_cols=83 Identities=11% Similarity=0.130 Sum_probs=72.7
Q ss_pred CCCceeEEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEEeCC
Q 019529 24 FKPKSEWKHEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVFQGG 103 (339)
Q Consensus 24 f~P~vDI~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsfenG 103 (339)
..|.++|.++++.+.|+++|||+.+++|.|. + . .+.|.|++... + -..|...+.|+..||++..++++.+|
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~---~-~-~~~l~v~~~~~--~--~~~y~~~~~L~~~I~~e~s~~~~~~~ 78 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVE---F-S-EKELSALVKLP--S--GEDYNLKLELLHPIIPEQSTFKVLST 78 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEE---C-S-SSCEEEEEECT--T--SSEEEEEECBSSCCCGGGEEEEECSS
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEE---E-E-cCEEEEEEEeC--C--CcEEEEEeeCCCcCCccccEEEEECC
Confidence 5678999999999999999999999999999 4 3 57899998642 1 24688999999999999999999999
Q ss_pred EEEEEeecCCCC
Q 019529 104 VLTIIMPKIKNN 115 (339)
Q Consensus 104 VLtItlPK~~~~ 115 (339)
.|.|+|+|....
T Consensus 79 ~l~i~L~K~~~~ 90 (114)
T 1rl1_A 79 KIEIKLKKPEAV 90 (114)
T ss_dssp SEEEEEECSSCC
T ss_pred EEEEEEEcCCCC
Confidence 999999998753
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.86 E-value=6e-09 Score=81.11 Aligned_cols=81 Identities=14% Similarity=0.161 Sum_probs=71.1
Q ss_pred CCceeEEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEEeCCE
Q 019529 25 KPKSEWKHEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVFQGGV 104 (339)
Q Consensus 25 ~P~vDI~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsfenGV 104 (339)
.|.++|.++++.+.|++++||+.++++.|. + . .+.|.|++... + -..|...+.|+..||++..++++.+|.
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~---~-~-~~~l~v~~~~~--~--~~~y~~~~~L~~~I~~~~s~~~~~~~~ 72 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNID---F-G-EQILSVVIEVP--G--EDAYYLQPRLFGKIIPDKCKYEVLSTK 72 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEE---E-C-SSBEEEEECCT--T--SCCEEECCBBSSCBCGGGCEEEECSSC
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEE---E-E-CCEEEEEEEcC--C--CcEEEEeeEcCCccCchhEEEEEECCE
Confidence 478999999999999999999999999999 5 3 67899998542 1 146888999999999999999999999
Q ss_pred EEEEeecCCC
Q 019529 105 LTIIMPKIKN 114 (339)
Q Consensus 105 LtItlPK~~~ 114 (339)
|.|+|+|...
T Consensus 73 l~i~L~K~~~ 82 (92)
T 2xcm_C 73 IEICLAKADI 82 (92)
T ss_dssp EEEEEEBSSS
T ss_pred EEEEEEcCCC
Confidence 9999999864
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.82 E-value=3.9e-05 Score=66.09 Aligned_cols=82 Identities=7% Similarity=0.240 Sum_probs=70.3
Q ss_pred CCCceeEEEcCCEEEEEEEcCCCC--CCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCC-CcCceeEEE
Q 019529 24 FKPKSEWKHEDDASILLVYLPGFV--KEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETC-DINNINSVF 100 (339)
Q Consensus 24 f~P~vDI~Etdd~yiL~vDLPGfk--KEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~V-D~d~IkAsf 100 (339)
..|.+.+..+++.++|.+.+|..+ ..++.|. ++ +..+.... ..|.-++.||..| |.++-+|+|
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~---v~--~~~F~F~~---------~PYyLRL~LP~~V~e~~~~kA~Y 67 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEII---IQ--ENMIIFHL---------SPYYLRLRFPHELIDDERSTAQY 67 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCE---EC--SSSEEECS---------SSSCEEECCSSCEECCSSCEEEE
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEE---Ee--CCEEEEec---------CCeEEEecCCCeeecCCCcceeE
Confidence 569999999999999999999999 8999999 65 56666652 3477789999998 999999999
Q ss_pred e--CCEEEEEeecCCCCCccc
Q 019529 101 Q--GGVLTIIMPKIKNNAQKD 119 (339)
Q Consensus 101 e--nGVLtItlPK~~~~~pr~ 119 (339)
+ .|.|+|+|||..+-+..+
T Consensus 68 D~d~~~~~VtLpK~~~Ge~F~ 88 (134)
T 2k8q_A 68 DSKDECINVKVAKLNKNEYFE 88 (134)
T ss_dssp ETTTTEEEEEEEESSTTCCCS
T ss_pred eccCCEEEEEEeCCCCCCCCC
Confidence 7 899999999998776554
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.00058 Score=57.50 Aligned_cols=83 Identities=7% Similarity=0.222 Sum_probs=69.8
Q ss_pred ccCCCceeEEEcCCEEEEEEEcCCCC--CCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCC-CcCceeE
Q 019529 22 ENFKPKSEWKHEDDASILLVYLPGFV--KEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETC-DINNINS 98 (339)
Q Consensus 22 e~f~P~vDI~Etdd~yiL~vDLPGfk--KEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~V-D~d~IkA 98 (339)
....|.+.+.++++.++|.+.+|-++ ..++++. +| ++.+.... ..|.-++.||..| |-+.-+|
T Consensus 14 ~~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~---vd--~~~F~F~~---------~PYyLRL~lP~~vved~~~~A 79 (115)
T 3eud_A 14 KMITPRFSITQDEEFIFLKIFISNIRFSAVGLEII---IQ--ENMIIFHL---------SPYYLRLRFPHELIDDERSTA 79 (115)
T ss_dssp CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEE---EE--TTEEEEEE---------TTEEEEEECSSCEECSTTCEE
T ss_pred CEeCCcEEEEECCCEEEEEEEcCceecccCccEEE---Ee--CCEEEEec---------CCeEEEEecCcceecCCCcce
Confidence 34789999999999999999999876 7799988 75 67777763 3477889999997 7788899
Q ss_pred EEe--CCEEEEEeecCCCCCcc
Q 019529 99 VFQ--GGVLTIIMPKIKNNAQK 118 (339)
Q Consensus 99 sfe--nGVLtItlPK~~~~~pr 118 (339)
+|+ +|.++|+|||..+-+--
T Consensus 80 ~YD~d~g~~~v~lpK~~~GE~F 101 (115)
T 3eud_A 80 QYDSKDECINVKVAKLNKNEYF 101 (115)
T ss_dssp EEETTTTEEEEEEEESSTTCCC
T ss_pred EEeCCCcEEEEEEcCCcCCCcC
Confidence 997 89999999999876543
No 17
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.52 E-value=0.00099 Score=55.38 Aligned_cols=87 Identities=15% Similarity=0.255 Sum_probs=70.2
Q ss_pred hcccCCCceeEEEcCCEEEEEEEcCCC---CCCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEE-CCCCCCcCc
Q 019529 20 TYENFKPKSEWKHEDDASILLVYLPGF---VKEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYK-IPETCDINN 95 (339)
Q Consensus 20 v~e~f~P~vDI~Etdd~yiL~vDLPGf---kKEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~-LPe~VD~d~ 95 (339)
.|..-.+.++|.++.+.+.|++.|||+ .++++.|. + . .+.|.|..... ++ ..|.-.+. |-..||++.
T Consensus 15 ~y~~~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~---~-~-~~~l~v~~~~~--~~--~~y~~~~~~L~~~I~~e~ 85 (127)
T 1x5m_A 15 GYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVH---F-T-ERSFDLLVKNL--NG--KSYSMIVNNLLKPISVEG 85 (127)
T ss_dssp CCCEECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEE---E-C-SSEEEEEECSC--SS--SCEEEEEECBSSCCCTTT
T ss_pred ccccCccEEEEEcCCCEEEEEEEeCCCCcCCccccEEE---E-E-cCEEEEEEEcC--CC--CcEEEEhHHhcCccCccc
Confidence 343345789999999999999999999 89999999 4 3 57899986321 11 34777785 999999999
Q ss_pred eeEEEeCCEEEEEeecCCCC
Q 019529 96 INSVFQGGVLTIIMPKIKNN 115 (339)
Q Consensus 96 IkAsfenGVLtItlPK~~~~ 115 (339)
-..++.++.|.|+|-|....
T Consensus 86 S~~~v~~~kVei~L~K~~~~ 105 (127)
T 1x5m_A 86 SSKKVKTDTVLILCRKKVEN 105 (127)
T ss_dssp CEEEEETTEEEEEEECSSSS
T ss_pred CEEEEeCCEEEEEEEECCCC
Confidence 88899999999999998743
No 18
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=97.39 E-value=0.00019 Score=70.07 Aligned_cols=70 Identities=20% Similarity=0.219 Sum_probs=56.7
Q ss_pred CceeEEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcC-ceeEEEeCCE
Q 019529 26 PKSEWKHEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDIN-NINSVFQGGV 104 (339)
Q Consensus 26 P~vDI~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d-~IkAsfenGV 104 (339)
+++.|... .|.|.+.||||.+++|++. - .++.|+|+ .|.|+|.|.||..+--- -..|+|+||.
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~---~--~gdeL~v~---------~g~~rR~i~LP~~L~~~~v~~A~~~~~~ 361 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLT---Q--YGPEVTVE---------AGDQRRNIFLPPALSGRPITGAKFQNNY 361 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEE---E--ETTEEEEE---------ETTEEEEEECCTTTTTCCEEEEEEETTE
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEE---E--ECCeEEEE---------ECCEeecccCCHHHcCCCccccEEECCE
Confidence 34544333 7999999999999999999 3 38899998 57899999999875443 4578999999
Q ss_pred EEEEeec
Q 019529 105 LTIIMPK 111 (339)
Q Consensus 105 LtItlPK 111 (339)
|+|++=.
T Consensus 362 L~i~~~~ 368 (374)
T 3igf_A 362 LIISFLE 368 (374)
T ss_dssp EEEEECC
T ss_pred EEEEEeh
Confidence 9999853
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.20 E-value=0.002 Score=54.83 Aligned_cols=90 Identities=12% Similarity=0.151 Sum_probs=70.9
Q ss_pred hcccCCCceeEEEc-CCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecCC--------CceeEEEEEEECCCC
Q 019529 20 TYENFKPKSEWKHE-DDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLAG--------GRWNQFSELYKIPET 90 (339)
Q Consensus 20 v~e~f~P~vDI~Et-dd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e~--------~~~g~F~R~f~LPe~ 90 (339)
+...-.|.++|+++ .+.+.|+|.++|+.++++.|. + . .+.|.|...-.... +.-..|.-.+.|-..
T Consensus 14 ~~~~~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~---f-~-~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~ 88 (134)
T 1wh0_A 14 MVNLAFVKNDSYEKGPDSVVVHVYVKEICRDTSRVL---F-R-EQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNL 88 (134)
T ss_dssp SEEESCCCEEEEEETTTEEEEEEECCSBCTTSCEEE---E-C-SSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSC
T ss_pred cccccCCCeEEEcCCCCEEEEEEEeCCCCcccCEEE---E-E-CCEEEEEEEcCCCcccccccccCcceeEEEecccccc
Confidence 33444689999999 999999999999999999999 4 3 57899886422100 001167777889999
Q ss_pred CCcCceeEEEeCCEEEEEeecCCC
Q 019529 91 CDINNINSVFQGGVLTIIMPKIKN 114 (339)
Q Consensus 91 VD~d~IkAsfenGVLtItlPK~~~ 114 (339)
||++.-..++.++-|.|+|.|...
T Consensus 89 I~pe~S~~~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 89 IEPEQCTFCFTASRIDICLRKRQS 112 (134)
T ss_dssp EEEEEEEEEECSSEEEEEEEESSS
T ss_pred CCchhCEEEEeCCEEEEEEEECCC
Confidence 999998888889999999999864
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.13 E-value=0.0057 Score=50.54 Aligned_cols=82 Identities=13% Similarity=0.198 Sum_probs=66.2
Q ss_pred CCCceeEEEcCCEEEEEEEcC-CC-CCCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEEe
Q 019529 24 FKPKSEWKHEDDASILLVYLP-GF-VKEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVFQ 101 (339)
Q Consensus 24 f~P~vDI~Etdd~yiL~vDLP-Gf-kKEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsfe 101 (339)
-.|.+.|.++.+.+.|++.|| |+ ++.||.|. +. .+.|.|..... . + ..+.-...|...|+++.-.-.+.
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~---i~--~~~l~v~~~~~-~-~--~~~~~~~~L~~~I~~e~S~w~i~ 88 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVA---LS--SSSIRVAMLEE-N-G--ERVLMEGKLTHKINTESSLWSLE 88 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEE---EC--SSEEEEEEECS-S-S--EEEEEEEEBSSCBCTTTCEEEEC
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEE---EE--cCEEEEEEEcc-C-C--CceEEcccccCcCCCcCCEEEEe
Confidence 458999999999999999999 88 89999999 53 68899986421 1 1 22345578999999999989998
Q ss_pred CCE-EEEEeecCCC
Q 019529 102 GGV-LTIIMPKIKN 114 (339)
Q Consensus 102 nGV-LtItlPK~~~ 114 (339)
+|- |.|+|-|...
T Consensus 89 ~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 89 PGKCVLVNLSKVGE 102 (124)
T ss_dssp TTSEEEEEECBSSS
T ss_pred CCCEEEEEEEECCC
Confidence 875 9999999863
No 21
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=96.98 E-value=0.0038 Score=51.77 Aligned_cols=79 Identities=10% Similarity=0.091 Sum_probs=65.9
Q ss_pred C-ceeEEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEEeCCE
Q 019529 26 P-KSEWKHEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVFQGGV 104 (339)
Q Consensus 26 P-~vDI~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsfenGV 104 (339)
| .++|.++.+.+.|+|.||+. +++.|. +. .+.|.+++.....+ ..|.-.+.|-..|+++..+.++.++-
T Consensus 3 P~~~~W~Qt~~~V~ltI~~~~~--~~~~V~---~~--~~~l~~~~~~~~~~---~~y~~~l~L~~~I~~e~S~~~v~~~k 72 (125)
T 1ejf_A 3 PASAKWYDRRDYVFIEFCVEDS--KDVNVN---FE--KSKLTFSCLGGSDN---FKHLNEIDLFHCIDPNDSKHKRTDRS 72 (125)
T ss_dssp CCCEEEEECSSEEEEEECCTTE--EEEEEE---EE--TTEEEEEEEETTTT---EEEEEEEEBSSCEEEEEEEEEECSSC
T ss_pred CCceeEEeCCCEEEEEEEecCC--CceEEE---EE--CCEEEEEEEeCCCC---ceEEEEEEccceeccccCEEEECCCE
Confidence 5 89999999999999999996 688888 43 67899987642221 35888889999999999988988899
Q ss_pred EEEEeecCCC
Q 019529 105 LTIIMPKIKN 114 (339)
Q Consensus 105 LtItlPK~~~ 114 (339)
|.|+|.|..+
T Consensus 73 iei~L~K~~~ 82 (125)
T 1ejf_A 73 ILCCLRKGES 82 (125)
T ss_dssp EEEEEEESST
T ss_pred EEEEEEECCC
Confidence 9999999864
No 22
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.93 E-value=0.0049 Score=51.48 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=60.8
Q ss_pred CCceeEEEcCCEEEEEEEcC-CCCCCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEEeCC
Q 019529 25 KPKSEWKHEDDASILLVYLP-GFVKEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVFQGG 103 (339)
Q Consensus 25 ~P~vDI~Etdd~yiL~vDLP-GfkKEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsfenG 103 (339)
.|.|.|.++.+.+.|+|.|| |+++.+|.|. +. .+.|.|... +. . .-...|...|+++.-.-.+.+|
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~---i~--~~~l~v~~~----g~---~-~~~~~L~~~I~~e~S~w~i~~~ 70 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIR---MV--GKKICVKNQ----GE---I-VIDGELLHEVDVSSLWWVINGD 70 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEE---EE--TTEEEEEET----TE---E-EEEEEBSSCEEEEEEEEEEETT
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEE---EE--CCEEEEEEC----CE---e-eEccccccccccccCEEEEeCC
Confidence 47899999999999999996 9999999999 43 688999862 21 1 3346789999999988899999
Q ss_pred EEEEEeecC
Q 019529 104 VLTIIMPKI 112 (339)
Q Consensus 104 VLtItlPK~ 112 (339)
-|.|+|-|.
T Consensus 71 kv~i~L~K~ 79 (131)
T 2o30_A 71 VVDVNVTKK 79 (131)
T ss_dssp EEEEEEEES
T ss_pred EEEEEEEEC
Confidence 999999998
No 23
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=96.74 E-value=0.0058 Score=50.53 Aligned_cols=79 Identities=16% Similarity=0.182 Sum_probs=63.3
Q ss_pred CCCceeEEEcCCEEEEEEEcC-C--CCCCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEE
Q 019529 24 FKPKSEWKHEDDASILLVYLP-G--FVKEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVF 100 (339)
Q Consensus 24 f~P~vDI~Etdd~yiL~vDLP-G--fkKEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsf 100 (339)
-.|.|.|.++.+.+.|++.|| | ++..||.|. +. .+.|.|... +. .+.-...|...|+++.-.-.+
T Consensus 15 ~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~---i~--~~~l~v~~k----g~---~~~~~g~L~~~I~~deS~w~i 82 (121)
T 3qor_A 15 DLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVD---IQ--RRHLRVGLK----GQ---PAIIDGELYNEVKVEESSWLI 82 (121)
T ss_dssp BCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEE---EE--TTEEEEEET----TS---CCSEEEEBSSCBCGGGCEEEE
T ss_pred cCCCEEEEEccceEEEEEECCCCCcccccceEEE---EE--cCEEEEEEc----Cc---ceEEeccccccccccccEEEE
Confidence 457899999999999999999 4 789999999 43 578888642 11 122355788999999989999
Q ss_pred eCC-EEEEEeecCCC
Q 019529 101 QGG-VLTIIMPKIKN 114 (339)
Q Consensus 101 enG-VLtItlPK~~~ 114 (339)
++| .|.|+|-|...
T Consensus 83 ~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 83 ADGAVVTVHLEKINK 97 (121)
T ss_dssp ETTTEEEEEEEBSSS
T ss_pred cCCCEEEEEEEECCC
Confidence 998 99999999764
No 24
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=96.69 E-value=0.0036 Score=52.16 Aligned_cols=79 Identities=16% Similarity=0.207 Sum_probs=63.9
Q ss_pred CCCceeEEEcCCEEEEEEEcC-C--CCCCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEE
Q 019529 24 FKPKSEWKHEDDASILLVYLP-G--FVKEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVF 100 (339)
Q Consensus 24 f~P~vDI~Etdd~yiL~vDLP-G--fkKEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsf 100 (339)
-.|.|.|.++.+.+.|++.|| | +++.+|.|. +. .+.|.|... +.. +.-...|...|+++.-.-.+
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~---i~--~~~l~v~~k----g~~---~~~~~~L~~~I~~e~s~w~i 73 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVD---IQ--RRHLRVGLK----GQP---PVVDGELYNEVKVEESSWLI 73 (131)
T ss_dssp SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEE---EE--TTEEEEEET----TSC---CSBCSCBSSCBCSTTCEEEE
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccccceEEE---Ee--CCEEEEEEC----Cce---EEEecccccccccccCEEEE
Confidence 458899999999999999999 6 899999999 43 688999752 211 11234578899999988999
Q ss_pred eCC-EEEEEeecCCC
Q 019529 101 QGG-VLTIIMPKIKN 114 (339)
Q Consensus 101 enG-VLtItlPK~~~ 114 (339)
.+| .|.|+|-|...
T Consensus 74 ~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 74 EDGKVVTVHLEKINK 88 (131)
T ss_dssp ETTTEEEEEEEBSSS
T ss_pred cCCCEEEEEEEECCC
Confidence 998 89999999874
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=96.54 E-value=0.016 Score=50.14 Aligned_cols=79 Identities=14% Similarity=0.179 Sum_probs=65.1
Q ss_pred cCCCceeEEEcCCEEEEEEEcC-CCCCCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEEe
Q 019529 23 NFKPKSEWKHEDDASILLVYLP-GFVKEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVFQ 101 (339)
Q Consensus 23 ~f~P~vDI~Etdd~yiL~vDLP-GfkKEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsfe 101 (339)
.-.|.|.|.++.+.+.|+|.|| |++..+|.|. + . .+.|.|... +. . .-...|...|+++.-.-.+.
T Consensus 11 ~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~---i-~-~~~L~v~~k----g~---~-~l~g~L~~~I~~eeS~w~i~ 77 (157)
T 2rh0_A 11 CGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCG---L-Q-SRHVALAVG----GR---E-ILKGKLFDSTIADEGTWTLE 77 (157)
T ss_dssp EECSSEEEEECSSEEEEEEECCTTCCGGGEEEE---E-C-SSEEEEEET----TE---E-EEEEEBSSCBCGGGCEEEEE
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccceEEE---E-e-cCEEEEEEC----CE---E-EEeeccccccCccccEEEEc
Confidence 3568899999999999999998 8999999999 5 3 678998752 21 2 24467899999999999999
Q ss_pred CCE-EEEEeecCCC
Q 019529 102 GGV-LTIIMPKIKN 114 (339)
Q Consensus 102 nGV-LtItlPK~~~ 114 (339)
+|- |.|+|-|...
T Consensus 78 ~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 78 DRKMVRIVLTKTKR 91 (157)
T ss_dssp CCCEEEEEEEBSSC
T ss_pred CCcEEEEEEEEcCC
Confidence 875 9999999875
No 26
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.0018 Score=54.64 Aligned_cols=84 Identities=7% Similarity=0.143 Sum_probs=60.3
Q ss_pred CCCceeEEEcCCE-------EEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecC-CC-ceeEEEEEEECCCCCCcC
Q 019529 24 FKPKSEWKHEDDA-------SILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLA-GG-RWNQFSELYKIPETCDIN 94 (339)
Q Consensus 24 f~P~vDI~Etdd~-------yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e-~~-~~g~F~R~f~LPe~VD~d 94 (339)
..|.++|.++.+. +.|+|.|||+. ++.|. + . .+.|.|++..... ++ .-..|.-.+.|...||++
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~---~-~-~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe 77 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELT---I-K-PSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPE 77 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCC---B-C-SSEEEECCEEC-------CEEBCEEEECSSCCCSS
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEE---E-E-CCEEEEEEecccccCCccCceEEEEEEChhhcccc
Confidence 4688999999877 99999999985 77777 4 2 5789998754321 00 124677888999999999
Q ss_pred ceeEEEeCCE-EEEEeecCCC
Q 019529 95 NINSVFQGGV-LTIIMPKIKN 114 (339)
Q Consensus 95 ~IkAsfenGV-LtItlPK~~~ 114 (339)
..+.++.++. |.|+|.|..+
T Consensus 78 ~S~~~v~~~~~vei~L~K~~~ 98 (134)
T 2cg9_X 78 KTMHKVANGQHYFLKLYKKDL 98 (134)
T ss_dssp SEEEEECCC--CEEEEEECSS
T ss_pred ccEEEECCCEEEEEEEEECCC
Confidence 9999999888 9999999873
No 27
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=96.42 E-value=0.0091 Score=51.50 Aligned_cols=81 Identities=16% Similarity=0.143 Sum_probs=65.0
Q ss_pred CCCceeEEEcCCEEEEEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEEeCC
Q 019529 24 FKPKSEWKHEDDASILLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVFQGG 103 (339)
Q Consensus 24 f~P~vDI~Etdd~yiL~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsfenG 103 (339)
+.|.++|.++.+.++|+|.|||+ .++.|. + +..+.|.+++. ..++ ..|.-.+.|-..||++ -+.++.+.
T Consensus 3 ~~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~---~-~~~~~l~~~~~--~~~~--~~y~~~l~L~~~Idpe-S~~~v~~~ 71 (150)
T 2kmw_A 3 RNPEVLWAQRSDKVYLTVALPDA--KDISVK---C-EPQGLFSFSAL--GAQG--ERFEFSLELYGKIMTE-YRKNVGLR 71 (150)
T ss_dssp ECCCEEEEECSSEEEEEECCSSE--EEEEEC---C-CTTEEEEEEEE--TTTT--EEEEEEEEBSSCEEEE-EEEEEESS
T ss_pred cCCcEEEEeCCCEEEEEEEeCCC--CceEEE---E-ecCCEEEEEEE--cCCC--ceEEEEeEhhhccccc-ceEEecCC
Confidence 45899999999999999999998 467777 3 22468999986 2222 4678888999999999 77787888
Q ss_pred EEEEEeecCCCC
Q 019529 104 VLTIIMPKIKNN 115 (339)
Q Consensus 104 VLtItlPK~~~~ 115 (339)
-+.|+|.|..+.
T Consensus 72 kIei~L~K~e~~ 83 (150)
T 2kmw_A 72 NIIFSIQKEERS 83 (150)
T ss_dssp SEEEEEEECCSS
T ss_pred EEEEEEEECCCC
Confidence 899999998754
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=66.61 E-value=8.9 Score=29.18 Aligned_cols=34 Identities=9% Similarity=0.152 Sum_probs=29.5
Q ss_pred eEEEEEEECCCCCCcCceeEEEeCCEEEEEeecCC
Q 019529 79 NQFSELYKIPETCDINNINSVFQGGVLTIIMPKIK 113 (339)
Q Consensus 79 g~F~R~f~LPe~VD~d~IkAsfenGVLtItlPK~~ 113 (339)
..|.-.+.|| +++.+.|.-.+++|+|+|+.-+..
T Consensus 7 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 7 DRWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp CEEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 4688899999 699999999999999999987654
No 29
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=56.99 E-value=14 Score=28.14 Aligned_cols=33 Identities=12% Similarity=0.169 Sum_probs=28.9
Q ss_pred eEEEEEEECCCCCCcCceeEEEeCCEEEEEeecC
Q 019529 79 NQFSELYKIPETCDINNINSVFQGGVLTIIMPKI 112 (339)
Q Consensus 79 g~F~R~f~LPe~VD~d~IkAsfenGVLtItlPK~ 112 (339)
..|.-.+.|| +++.+.|+-.+.+|.|+|+.-+.
T Consensus 6 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 38 (90)
T 2y1y_A 6 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 38 (90)
T ss_dssp CCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEe
Confidence 3588889999 79999999999999999998654
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=55.66 E-value=16 Score=28.03 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=29.4
Q ss_pred eEEEEEEECCCCCCcCceeEEEeCCEEEEEeecCC
Q 019529 79 NQFSELYKIPETCDINNINSVFQGGVLTIIMPKIK 113 (339)
Q Consensus 79 g~F~R~f~LPe~VD~d~IkAsfenGVLtItlPK~~ 113 (339)
..|.-.+.|| +++.+.|+-.+.+|.|+|+.-+..
T Consensus 14 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~ 47 (100)
T 3gla_A 14 NHFVLYADLP-GIDPSQIEVQMDKGILSIRGERKS 47 (100)
T ss_dssp SEEEEEEECT-TSCGGGCEEEEETTEEEEEEEECC
T ss_pred CEEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcC
Confidence 4678888999 699999999999999999987654
No 31
>4e6f_A Uncharacterized protein; PF14730 family protein, DUF4468 with TBP-like fold,structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.49A {Bacteroides ovatus}
Probab=55.44 E-value=13 Score=33.34 Aligned_cols=73 Identities=19% Similarity=0.262 Sum_probs=46.2
Q ss_pred EEEEEEEcCCCCCCCe--------------------EEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEE-ECCCCCCcC
Q 019529 36 ASILLVYLPGFVKEQI--------------------KVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELY-KIPETCDIN 94 (339)
Q Consensus 36 ~yiL~vDLPGfkKEDI--------------------kV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f-~LPe~VD~d 94 (339)
-|...+++||+++++| .|- ++|...+.|...|+- |--|+.+| .|.-..=--
T Consensus 26 vFt~~i~vPg~S~~qIYd~~~~wl~~~~~~~~~~~SrV~--~~nk~eg~Iaa~~~E------~LvFs~s~lsLDrT~f~Y 97 (181)
T 4e6f_A 26 VFSKEFQIPGMSQAQIYDTMTKWMDERLKENKNIDSRIV--FSDEAKGTIAGVGEE------WIVFSSSALSLDRTLVNY 97 (181)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHHHHTTCSTTCEEE--EEETTTTEEEEEEEE------EEEEEECSSCEEEEEEEE
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHhccccCcCceEE--EEcCCCCeEEEEEEE------EEEEccccccccceEEEE
Confidence 4667889999998744 444 565556666666664 56666543 111111112
Q ss_pred ceeEEEeCCEEEEEeecCCCCC
Q 019529 95 NINSVFQGGVLTIIMPKIKNNA 116 (339)
Q Consensus 95 ~IkAsfenGVLtItlPK~~~~~ 116 (339)
.+.+...||.++|+|-+..=.-
T Consensus 98 ~l~~~c~dg~~~lt~~rI~Y~Y 119 (181)
T 4e6f_A 98 QITVTCKPGNCLVELEKIRFTY 119 (181)
T ss_dssp EEEEEEETTEEEEEEEEEEEEE
T ss_pred EEEEEecCCeEEEEEEEEEEEe
Confidence 4667788999999998875443
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=55.29 E-value=15 Score=28.70 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=29.2
Q ss_pred eEEEEEEECCCCCCcCceeEEEeCCEEEEEeecC
Q 019529 79 NQFSELYKIPETCDINNINSVFQGGVLTIIMPKI 112 (339)
Q Consensus 79 g~F~R~f~LPe~VD~d~IkAsfenGVLtItlPK~ 112 (339)
..|.-.+.|| +++.+.|+-.+.+|.|+|+.-+.
T Consensus 11 ~~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~ 43 (101)
T 2wj5_A 11 GYFSVLLDVK-HFSPEEISVKVVGDHVEVHARHE 43 (101)
T ss_dssp SCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEe
Confidence 3578889999 79999999999999999998764
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=54.24 E-value=18 Score=28.65 Aligned_cols=32 Identities=9% Similarity=0.155 Sum_probs=28.5
Q ss_pred eEEEEEEECCCCCCcCceeEEEeCCEEEEEeec
Q 019529 79 NQFSELYKIPETCDINNINSVFQGGVLTIIMPK 111 (339)
Q Consensus 79 g~F~R~f~LPe~VD~d~IkAsfenGVLtItlPK 111 (339)
..|.-.+.|| +++.+.|.-.+.+|.|+|+.-+
T Consensus 12 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~ 43 (106)
T 3l1e_A 12 DKFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKH 43 (106)
T ss_dssp SEEEEEEECT-TSCGGGEEEEEETTEEEEEEEE
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEE
Confidence 4688889999 6999999999999999999854
No 34
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=53.58 E-value=18 Score=28.21 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=28.8
Q ss_pred eEEEEEEECCCCCCcCceeEEEeCCEEEEEeecC
Q 019529 79 NQFSELYKIPETCDINNINSVFQGGVLTIIMPKI 112 (339)
Q Consensus 79 g~F~R~f~LPe~VD~d~IkAsfenGVLtItlPK~ 112 (339)
..|.-.+.|| +++.+.|+-.++++.|+|+.-+.
T Consensus 16 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~ 48 (102)
T 4fei_A 16 THLDLLLDVP-GVDAGTLALAEDGGQLTVSGERP 48 (102)
T ss_dssp TEEEEEEECT-TCCGGGCEEEEETTEEEEEEEEC
T ss_pred CEEEEEEECC-CCchHhEEEEEECCEEEEEEEEe
Confidence 3688889999 79999999999999999987763
No 35
>2lk9_A Bone marrow stromal antigen 2; membrane, micelle, antiviral protein-immune system complex; NMR {Homo sapiens}
Probab=50.12 E-value=1.4 Score=29.79 Aligned_cols=22 Identities=41% Similarity=0.605 Sum_probs=15.0
Q ss_pred hhhhhchhh-hHHHhhccceEEE
Q 019529 310 QLLVNMGTA-VLVIVGLGAYLSY 331 (339)
Q Consensus 310 ~~~~n~g~a-vlvi~algayv~y 331 (339)
+|++-+|+- +|||||||..+.|
T Consensus 4 KL~lg~Gvl~LLviV~LgV~LI~ 26 (35)
T 2lk9_A 4 KLLLGIGILVLLIIVILGVPLII 26 (35)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeecccHHHHHHHHHhcchheE
Confidence 466667764 5789999987543
No 36
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=41.49 E-value=49 Score=26.44 Aligned_cols=34 Identities=12% Similarity=0.117 Sum_probs=28.9
Q ss_pred EEEEEEECCCCCCcCceeEEEeC-CEEEEEeecCCC
Q 019529 80 QFSELYKIPETCDINNINSVFQG-GVLTIIMPKIKN 114 (339)
Q Consensus 80 ~F~R~f~LPe~VD~d~IkAsfen-GVLtItlPK~~~ 114 (339)
.|.-.+.|| +++.+.|+-.+.+ |.|+|+.-+...
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 566777899 6999999999999 999999887653
No 37
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=40.29 E-value=45 Score=27.96 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=29.4
Q ss_pred eEEEEEEECCCCCCcCceeEEEeCCEEEEEeecCC
Q 019529 79 NQFSELYKIPETCDINNINSVFQGGVLTIIMPKIK 113 (339)
Q Consensus 79 g~F~R~f~LPe~VD~d~IkAsfenGVLtItlPK~~ 113 (339)
..|.-.+.|| +++.+.|+-.+.+|+|+|+.-+..
T Consensus 66 ~~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 66 QHIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp SEEEEEEECT-TCCGGGEEEEEETTEEEEEEECCC
T ss_pred CEEEEEEECC-CCChHhEEEEEECCEEEEEEEEcc
Confidence 3677888898 589999999999999999987665
No 38
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=32.84 E-value=47 Score=28.84 Aligned_cols=33 Identities=12% Similarity=0.169 Sum_probs=29.4
Q ss_pred eEEEEEEECCCCCCcCceeEEEeCCEEEEEeecC
Q 019529 79 NQFSELYKIPETCDINNINSVFQGGVLTIIMPKI 112 (339)
Q Consensus 79 g~F~R~f~LPe~VD~d~IkAsfenGVLtItlPK~ 112 (339)
..|.-.+.|| +++.+.|+..+.+|+|+|+.-+.
T Consensus 73 d~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~ 105 (175)
T 2klr_A 73 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 105 (175)
T ss_dssp SEEEEEECCS-SCCGGGEEEEEETTEEEEEEEEE
T ss_pred CeEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 5788899999 79999999999999999998653
No 39
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=32.65 E-value=28 Score=28.16 Aligned_cols=16 Identities=44% Similarity=0.748 Sum_probs=14.4
Q ss_pred ceeEEEeCCEEEEEee
Q 019529 95 NINSVFQGGVLTIIMP 110 (339)
Q Consensus 95 ~IkAsfenGVLtItlP 110 (339)
.+.+.+.+|||+|+++
T Consensus 29 d~D~e~~~gVLti~f~ 44 (106)
T 1ew4_A 29 DIDCEINGGVLTITFE 44 (106)
T ss_dssp CCEEEEETTEEEEECT
T ss_pred CEeeeccCCEEEEEEC
Confidence 3889999999999997
No 40
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=30.49 E-value=73 Score=25.42 Aligned_cols=46 Identities=15% Similarity=0.196 Sum_probs=31.5
Q ss_pred CCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEEeCCE---EEEEeec
Q 019529 48 KEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVFQGGV---LTIIMPK 111 (339)
Q Consensus 48 KEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsfenGV---LtItlPK 111 (339)
|+.++|. ++ ++.|+|.|.+ |...|.|.-| .|...++|+. |.|..|.
T Consensus 20 P~gV~V~---i~--~~~VtVKGPk-------G~L~~~~~h~------~v~i~~e~~~~~~i~v~~~~ 68 (100)
T 2cql_A 20 PENVDIT---LK--GRTVIVKGPR-------GTLRRDFNHI------NVELSLLGKKKKRLRVDKWW 68 (100)
T ss_dssp CSSCEEE---EE--TTEEEEEETT-------EEEEEECCSS------CCEEEEECSSSCEEEEECCS
T ss_pred CCCCEEE---Ee--CCEEEEECCC-------ceEEEEeccC------cEEEEEcCCceeEEEEEccC
Confidence 4677888 64 7899999965 7777766422 2455677666 7777554
No 41
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=27.51 E-value=1e+02 Score=26.96 Aligned_cols=46 Identities=17% Similarity=0.392 Sum_probs=33.9
Q ss_pred CCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEEeCCEEEEEeecC
Q 019529 48 KEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVFQGGVLTIIMPKI 112 (339)
Q Consensus 48 KEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsfenGVLtItlPK~ 112 (339)
++.++|. ++ ++.|+|.|.+ |...+.| +.. |...++||.|.|+.|..
T Consensus 11 P~gV~V~---i~--~~~VtVkGpk-------G~L~~~~--~~~-----v~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVT---VN--GNTVTVKGPK-------GELTRTF--HPD-----MTITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEE---EE--TTEEEEEETT-------EEEEEEC--CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEE---Ee--CCEEEEECCC-------eEEEEEc--CCC-----EEEEEeCCEEEEEcCCC
Confidence 4677888 64 7999999965 7888777 444 44567899999986643
No 42
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=27.05 E-value=44 Score=28.04 Aligned_cols=16 Identities=25% Similarity=0.472 Sum_probs=14.4
Q ss_pred eeEEEeCCEEEEEeec
Q 019529 96 INSVFQGGVLTIIMPK 111 (339)
Q Consensus 96 IkAsfenGVLtItlPK 111 (339)
+.+.+.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7899999999999973
No 43
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=25.75 E-value=97 Score=25.83 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=27.8
Q ss_pred EEEEEEECCCCCCcCceeEEEe-CCEEEEEeecCCC
Q 019529 80 QFSELYKIPETCDINNINSVFQ-GGVLTIIMPKIKN 114 (339)
Q Consensus 80 ~F~R~f~LPe~VD~d~IkAsfe-nGVLtItlPK~~~ 114 (339)
.|.-.+.|| +++.+.|+-.+. +++|+|+.-+...
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 567778899 699999999995 6799999876543
No 44
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=25.06 E-value=87 Score=27.67 Aligned_cols=49 Identities=24% Similarity=0.392 Sum_probs=34.7
Q ss_pred EEEEcCCCCCCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEEeCCEEEEEe
Q 019529 39 LLVYLPGFVKEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVFQGGVLTIIM 109 (339)
Q Consensus 39 L~vDLPGfkKEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsfenGVLtItl 109 (339)
..+.+| ++++|. ++ ++.++|.|.+ |...|.|.-| + |.-.++++.|+|..
T Consensus 9 ~~I~IP----~gV~v~---i~--~~~V~VkGpk-------G~L~~~~~~~-~-----v~i~~~~~~l~v~~ 57 (184)
T 3j21_F 9 EEVEIP----EGVEVT---VE--GYKVKVKGPK-------GELEREFFWP-G-----IQIFTEDGNVVIYK 57 (184)
T ss_dssp EEEECC----SSCEEE---ES--SSEEEEECSS-------CEEEEECCCT-T-----CEEEEETTEEEEEC
T ss_pred EEEeCC----CCcEEE---Ee--CCEEEEEcCC-------eEEEEEecCC-c-----EEEEEeCCEEEEEE
Confidence 345555 788888 64 7999999865 7777777433 2 34467899999874
No 45
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=24.46 E-value=1.2e+02 Score=26.68 Aligned_cols=47 Identities=19% Similarity=0.237 Sum_probs=33.8
Q ss_pred CCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEEeCCEEEEEeecC
Q 019529 48 KEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVFQGGVLTIIMPKI 112 (339)
Q Consensus 48 KEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsfenGVLtItlPK~ 112 (339)
++.++|. ++ ++.|+|+|.+ |...|.|. +.. |...++||.|.|+.|..
T Consensus 9 P~gV~v~---i~--~~~vtVkGpk-------G~L~~~~~-~~~-----v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAE---QD--HLDITVEGDN-------GSVTRRLW-YPD-----IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEE---EE--TTEEEEEETT-------EEEEEECC-CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEE---Ee--CCEEEEECCC-------eEEEEEEE-CCe-----EEEEEECCEEEEEcCCC
Confidence 3677888 64 7999999965 77887773 222 44567899999886643
No 46
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=23.91 E-value=1.4e+02 Score=27.08 Aligned_cols=46 Identities=17% Similarity=0.248 Sum_probs=33.7
Q ss_pred CCCeEEEeeEEeCCCCEEEEEEEeecCCCceeEEEEEEECCCCCCcCceeEEEeCCEEEEEeecC
Q 019529 48 KEQIKVMNTYVDNITLSLKVEGRRPLAGGRWNQFSELYKIPETCDINNINSVFQGGVLTIIMPKI 112 (339)
Q Consensus 48 KEDIkV~is~VD~~~~~L~IsGER~~e~~~~g~F~R~f~LPe~VD~d~IkAsfenGVLtItlPK~ 112 (339)
++.++|. ++ ++.|+|.|.+ |...+.| +.. |...++||.|.|+.+..
T Consensus 39 P~gV~V~---i~--~~~VtVKGPk-------G~L~~~~--~~~-----v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVN---AQ--DGVFKVKGPK-------GELTVPY--NTE-----LTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEE---Ee--CCEEEEECCC-------EEEEEEC--CCC-----eEEEEECCEEEEEcCCC
Confidence 4677888 54 7899999975 7777776 443 44567899999986643
No 47
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=20.00 E-value=2e+02 Score=25.96 Aligned_cols=62 Identities=13% Similarity=0.132 Sum_probs=40.7
Q ss_pred EcCCCCCCCeE-EEeeEEeCCCCEEEEEEEeecC---CCceeEEEEEEECCCCCCcCceeEEEeCCEEEEE
Q 019529 42 YLPGFVKEQIK-VMNTYVDNITLSLKVEGRRPLA---GGRWNQFSELYKIPETCDINNINSVFQGGVLTII 108 (339)
Q Consensus 42 DLPGfkKEDIk-V~is~VD~~~~~L~IsGER~~e---~~~~g~F~R~f~LPe~VD~d~IkAsfenGVLtIt 108 (339)
.|||+..+ ++ |. +. ..+++|.+....... =...+.+.|+++|...-|.+.|.. ..+|.+.|.
T Consensus 21 ~l~g~~~~-lSGla--~~-~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~-~~~g~~~vs 86 (255)
T 3qqz_A 21 EIAGITNN-ISSLT--WS-AQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEY-IGDNQFVIS 86 (255)
T ss_dssp ECTTCCSC-EEEEE--EE-TTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEE-CSTTEEEEE
T ss_pred ECCCcccC-cceeE--Ee-CCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEE-eCCCEEEEE
Confidence 49999975 54 55 43 446788876654211 011278999999987788888854 367776664
Done!