Query 019532
Match_columns 339
No_of_seqs 247 out of 1155
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 03:15:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019532.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019532hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gjz_A Lysine-specific demethy 100.0 9.3E-35 3.2E-39 263.6 11.1 160 158-320 2-163 (235)
2 3al5_A HTYW5, JMJC domain-cont 100.0 4.3E-30 1.5E-34 248.9 10.0 161 156-320 28-206 (338)
3 3k2o_A Bifunctional arginine d 100.0 1.6E-29 5.4E-34 244.8 12.6 157 156-320 44-213 (336)
4 3d8c_A Hypoxia-inducible facto 99.9 1.6E-26 5.4E-31 224.9 7.2 163 155-321 38-223 (349)
5 2yu1_A JMJC domain-containing 99.8 1.7E-18 5.8E-23 172.9 10.1 157 156-322 51-239 (451)
6 3kv9_A JMJC domain-containing 99.6 3.7E-16 1.3E-20 153.4 8.8 151 158-321 46-217 (397)
7 3kv5_D JMJC domain-containing 99.6 5.3E-16 1.8E-20 156.6 9.5 150 158-320 137-307 (488)
8 3k3o_A PHF8, PHD finger protei 99.6 5.7E-16 2E-20 150.8 9.1 151 158-322 18-190 (371)
9 3pua_A GRC5, PHD finger protei 99.6 4.6E-15 1.6E-19 145.4 9.2 146 164-321 53-216 (392)
10 3kv4_A PHD finger protein 8; e 99.5 6.2E-15 2.1E-19 147.1 8.6 145 164-321 110-273 (447)
11 1vrb_A Putative asparaginyl hy 99.5 5.2E-15 1.8E-19 143.4 6.9 148 160-320 23-181 (342)
12 2xdv_A MYC-induced nuclear ant 99.4 1.9E-14 6.4E-19 143.8 -3.0 151 162-320 23-179 (442)
13 4diq_A Lysine-specific demethy 98.7 7.8E-09 2.7E-13 103.8 5.9 143 162-321 51-205 (489)
14 3pur_A Lysine-specific demethy 98.0 1.4E-05 4.8E-10 80.7 9.2 147 166-321 152-338 (528)
15 2ypd_A Probable JMJC domain-co 96.7 0.00074 2.5E-08 65.6 3.5 136 166-310 23-194 (392)
16 3avr_A Lysine-specific demethy 53.6 41 0.0014 33.9 8.5 66 171-238 87-169 (531)
17 2xxz_A Lysine-specific demethy 39.0 43 0.0015 31.7 5.8 73 164-239 23-112 (332)
18 3fxd_A Protein ICMQ; helix bun 29.8 31 0.0011 24.1 2.3 21 40-60 8-28 (57)
19 1zvf_A 3-hydroxyanthranilate 3 25.1 39 0.0013 29.1 2.6 38 281-318 34-71 (176)
20 3rkv_A Putative peptidylprolyl 20.9 55 0.0019 25.5 2.6 25 76-100 69-93 (162)
No 1
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=100.00 E-value=9.3e-35 Score=263.56 Aligned_cols=160 Identities=44% Similarity=0.832 Sum_probs=139.5
Q ss_pred cccccCCCCHHHHHHhhhcCCCcEEEecCCCCCccccCCCCHhHHHHHhCCccEEEEecCccccCCceeeeecHHHHHHH
Q 019532 158 LVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLCQDWKQELIPFSQFLER 237 (339)
Q Consensus 158 ~I~R~~~~S~e~F~~~y~~~~~PvVI~g~~~~WPA~~kWs~~dYL~~~~G~r~VpVe~g~~y~~~~w~q~~mt~~eFl~~ 237 (339)
.|+|++.||+++|.++|+.+++||||+|++++|||+++|+ ++||++++|++.|+|+.+..+.+..+....|+|++|++.
T Consensus 2 tipri~~pS~~eF~~~y~~~~~Pvvi~g~~~~wpa~~~w~-~~yL~~~~g~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (235)
T 4gjz_A 2 TVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWS-LEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISK 80 (235)
T ss_dssp BCCEEESCCHHHHHHHTTTTTCCEEEESSSTTSHHHHHCS-HHHHHHHHTTSEEEEEEC-------CEEEEEEHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHhcCCCcEEEeCCCcCCcccccCC-HHHHHHHcCCCeEEEEecCcccCCccceeeccHHHHHHH
Confidence 5899999999999999999999999999999999999998 999999999999999999988888899999999999999
Q ss_pred HHhCCCCCCccchhccchhhhhhHHhhhccCCCCccccCCC--CCccceEEEcCCCCCCccccCCCCCeeEEEEEEEeee
Q 019532 238 IQSNGSSASVPTYLAQHQLFDQINELRNDICIPDYCFVGGG--ELRSLNAWFGPAGTVTPLHHDPHHNILAQVSLYCALS 315 (339)
Q Consensus 238 ~~~~~~~~~~~~YLaq~~L~~qiP~L~~Di~iPdy~~~~~~--~~~~~n~WiGp~gT~TPLH~Dp~~Nll~QV~G~Kr~~ 315 (339)
+.... .....|++++.+.+++|+|.+|+.+|+++..... .....|+|||++||+|++|+|+++|++|||.|+|++.
T Consensus 81 ~~~~~--~~~~~y~~~~~~~~~~~~l~~d~~~p~~~~~~~~~~~~~~~~~wiG~~gs~t~~H~D~~~n~~~qv~G~K~w~ 158 (235)
T 4gjz_A 81 YIVNE--PRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIR 158 (235)
T ss_dssp HTSSC--CSSCEEEEEECHHHHCHHHHTTCCCCGGGGGSSSCGGGCEEEEEEECTTCEEEEECCSSEEEEEEEESCEEEE
T ss_pred HhhcC--CcccceeehhhhhhhhHHHHHhhcCCccccccccccCccceEEEEeCCCCCceeeeccccceEEEEeeeEeeE
Confidence 87765 5677999999999999999999999998765432 2346799999999999999999999999999999977
Q ss_pred cCCCc
Q 019532 316 QRTST 320 (339)
Q Consensus 316 ~~~~~ 320 (339)
++.|+
T Consensus 159 L~pP~ 163 (235)
T 4gjz_A 159 LYSPQ 163 (235)
T ss_dssp EECGG
T ss_pred EcCcc
Confidence 77664
No 2
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=99.96 E-value=4.3e-30 Score=248.86 Aligned_cols=161 Identities=20% Similarity=0.344 Sum_probs=136.5
Q ss_pred cCcccccCCCCHHHHHHhhhcCCCcEEEecCCCCCccccCCCCHhHHHHHhCCccEEEEecCc----cccCCceeeeecH
Q 019532 156 CKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKN----YLCQDWKQELIPF 231 (339)
Q Consensus 156 ~~~I~R~~~~S~e~F~~~y~~~~~PvVI~g~~~~WPA~~kWs~~dYL~~~~G~r~VpVe~g~~----y~~~~w~q~~mt~ 231 (339)
..+|+|++.+|+++|.++|+.+++||||+| +++|||+++|+ ++||++++|++.|+|+++.. |...+|.++.|+|
T Consensus 28 ~~~I~r~~~lS~~eF~~~y~~~~kPvVi~g-~~~wpa~~~Ws-~dyL~~~~g~~~V~v~~~~~~~~~~~~~~~~~~~~~f 105 (338)
T 3al5_A 28 HLPVPRLEGVSREQFMQHLYPQRKPLVLEG-IDLGPCTSKWT-VDYLSQVGGKKEVKIHVAAVAQMDFISKNFVYRTLPF 105 (338)
T ss_dssp CCBCCEEESCCHHHHHHHTGGGCCCEEEES-CCCCTHHHHCC-HHHHHHHHCSCEEEEEC----CCCC-CCCCCEEEEEH
T ss_pred CCCCCEECCCCHHHHHHHhhcCCCeEEEeC-CCCCcccccCC-HHHHHHhhCCceEEEEEcCCCCcccccccceeEEeEH
Confidence 467999999999999999999999999999 89999999998 99999999999999998653 5566798999999
Q ss_pred HHHHHHHHhCCCC-----CCccchhccc---------hhhhhhHHhhhccCCCCccccCCCCCccceEEEcCCCCCCccc
Q 019532 232 SQFLERIQSNGSS-----ASVPTYLAQH---------QLFDQINELRNDICIPDYCFVGGGELRSLNAWFGPAGTVTPLH 297 (339)
Q Consensus 232 ~eFl~~~~~~~~~-----~~~~~YLaq~---------~L~~qiP~L~~Di~iPdy~~~~~~~~~~~n~WiGp~gT~TPLH 297 (339)
+||++.+...... ...+.||++. ++.+++|+|++|+.+|+++.. +.....++|||++|+.|++|
T Consensus 106 ~efl~~~~~~~~~~~l~~~~~~~Yl~~~~~~~~~~~~~l~~~~p~L~~d~~~P~~~~~--d~~~~s~l~~g~~g~~~~~H 183 (338)
T 3al5_A 106 DQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIKFPEFFKE--EQFFSSVFRISSPGLQLWTH 183 (338)
T ss_dssp HHHHHHHHC-CCSSCSSCTTCCCEEECCCSSTTTCCCCHHHHCHHHHTTCCCCCCSCG--GGEEEEEEEEECTTCEEEEE
T ss_pred HHHHHHHHhccccccccCCCcccchhhcccccccchhhHhHHCHHHHHhcCCCccccc--cccccceeEECCCCCCccce
Confidence 9999998765421 3457899863 588999999999999997643 23345689999999999999
Q ss_pred cCCCCCeeEEEEEEEeeecCCCc
Q 019532 298 HDPHHNILAQVSLYCALSQRTST 320 (339)
Q Consensus 298 ~Dp~~Nll~QV~G~Kr~~~~~~~ 320 (339)
+|+++|++|||.|+|++.+++|.
T Consensus 184 ~D~~~n~~~qv~G~K~w~L~pP~ 206 (338)
T 3al5_A 184 YDVMDNLLIQVTGKKRVVLFSPR 206 (338)
T ss_dssp CCSSEEEEEECSSCEEEEEECGG
T ss_pred ECCcccEEEEEEEEEEEEEECcc
Confidence 99999999999999998887764
No 3
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=99.96 E-value=1.6e-29 Score=244.75 Aligned_cols=157 Identities=19% Similarity=0.270 Sum_probs=134.4
Q ss_pred cCccccc--CCCCHHHHHHhhhcCCCcEEEecCCCCCccccCCCCHhHHHHHhCCccEEEEecCccccCCceeeeecHHH
Q 019532 156 CKLVVKR--SALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLCQDWKQELIPFSQ 233 (339)
Q Consensus 156 ~~~I~R~--~~~S~e~F~~~y~~~~~PvVI~g~~~~WPA~~kWs~~dYL~~~~G~r~VpVe~g~~y~~~~w~q~~mt~~e 233 (339)
...|+|+ +.+|+++|.++|+.+++||||+|++++|||+++|+ ++||++++|++.|+|+.+. .++ ...|+|++
T Consensus 44 ~~~I~Ri~~~~lS~eeF~~~y~~~~~PvVi~g~~~~WpA~~~Wt-~~yL~~~~G~~~V~v~~~~----~~~-~~~m~~~~ 117 (336)
T 3k2o_A 44 ADNVERADALQLSVEEFVERYERPYKPVVLLNAQEGWSAQEKWT-LERLKRKYRNQKFKCGEDN----DGY-SVKMKMKY 117 (336)
T ss_dssp CCCCCEEEGGGCCHHHHHHHTTTTTCCEEEESTTTTCTHHHHCS-HHHHHHHSTTCEEEEEECT----TSC-EEEEEHHH
T ss_pred CCCCCEecCCCCCHHHHHHHhhccCCCEEEeCCcCCChhHhhhh-HHHHHHHhCCceEEEEecC----CCc-eeeecHHH
Confidence 4689999 57999999999999999999999999999999998 9999999999999998753 233 47899999
Q ss_pred HHHHHHhCCCCCCccchhccchhhh--hhHHhhhccCCCCccccC------C-CCCccceEEEcCCCCCCccccCCCC--
Q 019532 234 FLERIQSNGSSASVPTYLAQHQLFD--QINELRNDICIPDYCFVG------G-GELRSLNAWFGPAGTVTPLHHDPHH-- 302 (339)
Q Consensus 234 Fl~~~~~~~~~~~~~~YLaq~~L~~--qiP~L~~Di~iPdy~~~~------~-~~~~~~n~WiGp~gT~TPLH~Dp~~-- 302 (339)
|++.+.... +..+.||+++++.+ ++|+|++|+.+|+||..+ . ...+..++|||++||+|++|+|+++
T Consensus 118 fl~~~~~~~--~~~~lYL~d~~~~e~~~~p~L~~dy~~P~~f~~d~~~~~~~~~~p~~~~~~~G~~gs~t~~H~D~~~~~ 195 (336)
T 3k2o_A 118 YIEYMESTR--DDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPRSGTGIHIDPLGTS 195 (336)
T ss_dssp HHHHHHHCC--CSSCCCEEESCGGGSTTGGGGGGGCCCCGGGCCCGGGGGCTTTSCCCEEEEEECTTCEEEEECCGGGCE
T ss_pred HHHHHHhcC--CCCCceEecccccccccchhHHHhcCCCcccccchhhhcccccCCCceEEEECCCCccCCcccCCCccc
Confidence 999998765 45689999988874 589999999999986421 0 1234579999999999999999997
Q ss_pred CeeEEEEEEEeeecCCCc
Q 019532 303 NILAQVSLYCALSQRTST 320 (339)
Q Consensus 303 Nll~QV~G~Kr~~~~~~~ 320 (339)
|++|||.|+|+|.+++|+
T Consensus 196 ~~~~~v~G~K~~~L~pP~ 213 (336)
T 3k2o_A 196 AWNALVQGHKRWCLFPTS 213 (336)
T ss_dssp EEEEEEESCEEEEEECTT
T ss_pred eeeEEEeeeEEEEEeCCC
Confidence 599999999997777764
No 4
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=99.93 E-value=1.6e-26 Score=224.87 Aligned_cols=163 Identities=23% Similarity=0.334 Sum_probs=124.5
Q ss_pred CcCcccccCCCCHHHHHHhhhcCCCcEEEecCCCCCccccCCCCHhHHHHHhCCccEEEEecCc----cccC-------C
Q 019532 155 SCKLVVKRSALSLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKN----YLCQ-------D 223 (339)
Q Consensus 155 ~~~~I~R~~~~S~e~F~~~y~~~~~PvVI~g~~~~WPA~~kWs~~dYL~~~~G~r~VpVe~g~~----y~~~-------~ 223 (339)
....|+|++.+|++ | ++|+.+++||||+|++.+||| ++|+ ++||++++|++.|+|+.+.. |.++ .
T Consensus 38 ~~~~I~Rv~~~s~~-~-~~y~~~~~PVVi~g~~~~wpA-~kWt-~eyL~~~~G~~~V~V~~~~~~~~~y~d~~~~~~~~~ 113 (349)
T 3d8c_A 38 PTRPIPRLSQSDPR-A-EELIENEEPVVLTDTNLVYPA-LKWD-LEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQN 113 (349)
T ss_dssp CEEECCEECTTCHH-H-HHHHHTTCCEEESCCCTTGGG-GGCC-HHHHHHHSCSSCEEEEEESSSBCCCCCGGGTTSCTT
T ss_pred CCCCceEecCCChh-H-HHHhcCCccEEEeCCCCCccc-ccCC-HHHHHHhhCCCeEEEEECCCCccccccccccccccc
Confidence 35689999999998 6 579999999999999999999 8998 99999999999999987532 3332 1
Q ss_pred c----eeeeecHHHHHHHHHhCCC-CCCccchhccchhhhhhHHhhhccCCCCccccC-----C--CCCccceEEEcCCC
Q 019532 224 W----KQELIPFSQFLERIQSNGS-SASVPTYLAQHQLFDQINELRNDICIPDYCFVG-----G--GELRSLNAWFGPAG 291 (339)
Q Consensus 224 w----~q~~mt~~eFl~~~~~~~~-~~~~~~YLaq~~L~~qiP~L~~Di~iPdy~~~~-----~--~~~~~~n~WiGp~g 291 (339)
| .++.|+|+||++.+..... .+..+.||+|...-...|.|..|+..+...+.. . +.....++|||++|
T Consensus 114 F~~~~~~~~m~~~efl~~~~~~~~~~~~~~~YL~~~~~~~~~~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~l~iG~~g 193 (349)
T 3d8c_A 114 FKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEG 193 (349)
T ss_dssp CCCSEEEEEECHHHHHHHHHHHHHHTCCCEEEEEEECCTTSCHHHHHHHHTSCHHHHHHHHHHTTCCCEEECEEEEECTT
T ss_pred ccccceeEeeEHHHHHHHHHhhcccCCCCCeeeecccccccchhhhhhhhccchhhhhhhhhccccCccccceEEEECCC
Confidence 3 3679999999999986421 134689999864333346788887532211110 0 11223469999999
Q ss_pred CCCccccCCCCCeeEEEEEEEeeecCCCcc
Q 019532 292 TVTPLHHDPHHNILAQVSLYCALSQRTSTF 321 (339)
Q Consensus 292 T~TPLH~Dp~~Nll~QV~G~Kr~~~~~~~~ 321 (339)
|+|++|+|+++|++|||.|+|++.+++|..
T Consensus 194 s~t~~H~D~~~n~~~qv~G~K~~~L~pP~~ 223 (349)
T 3d8c_A 194 NVTPAHYGEQQNFFAQIKGYKRCILFPPDQ 223 (349)
T ss_dssp CEEEEECCSEEEEEEEEESCEEEEEECGGG
T ss_pred CCccceECChhcEEEEEeceEEEEEeCcch
Confidence 999999999999999999999988887753
No 5
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=99.75 E-value=1.7e-18 Score=172.90 Aligned_cols=157 Identities=13% Similarity=0.006 Sum_probs=115.7
Q ss_pred cCcccccC--CCCHHHHHHhhhcCCCcEEEecCCCCCcc---ccCCCCHhHHHHHhC-CccEEEEecCccccCCceeeee
Q 019532 156 CKLVVKRS--ALSLEGFLSEYFLSGSPVIITDCMAHWPA---RTNWNDLDYLKRVAG-DRTVPVEVGKNYLCQDWKQELI 229 (339)
Q Consensus 156 ~~~I~R~~--~~S~e~F~~~y~~~~~PvVI~g~~~~WPA---~~kWs~~dYL~~~~G-~r~VpVe~g~~y~~~~w~q~~m 229 (339)
...|+|++ .+|. +|.++ ..+++||||+|+ ++||| .++|+ ++||++.+| ++.|+|.- .+.. ....|
T Consensus 51 ~~~V~ri~~~~Ls~-EF~~~-~~~nkPVVIt~~-~~Wpa~~P~~kWt-~dyL~~~~G~d~~V~V~D--~~~q---~~~~M 121 (451)
T 2yu1_A 51 ANFVTFMEGKDFNV-EYIQR-GGLRDPLIFKNS-DGLGIKMPDPDFT-VNDVKMCVGSRRMVDVMD--VNTQ---KGIEM 121 (451)
T ss_dssp CCCCEECCGGGCSH-HHHHH-HCSCSCEEESSC-TTTTCBCCCTTCC-HHHHHHHTCTTCCCCCEE--TTSS---CCTTC
T ss_pred CCceEecccccCCH-HHHHh-cCCCCcEEEccC-cCCCCcCCcCCCC-HHHHHHHcCCCceEeeEE--cCCC---cceee
Confidence 45788875 7899 88887 689999999999 99999 78999 999999999 58888752 1111 13579
Q ss_pred cHHHHHHHHHhCCCCCCccchh-----cc-chhh--hhhHHhhhccC-----CCCcccc---------CCCC-Cc-cceE
Q 019532 230 PFSQFLERIQSNGSSASVPTYL-----AQ-HQLF--DQINELRNDIC-----IPDYCFV---------GGGE-LR-SLNA 285 (339)
Q Consensus 230 t~~eFl~~~~~~~~~~~~~~YL-----aq-~~L~--~qiP~L~~Di~-----iPdy~~~---------~~~~-~~-~~n~ 285 (339)
+|++|++.+..... +..++|+ .+ ..+. .+.|.|.+|+. +|+++.. +... .. ..++
T Consensus 122 ~l~eyidy~~~~~d-~r~~LY~v~sLeF~~~~l~~~~~~P~l~~d~Dwv~~~~p~~l~~~~~d~f~~lge~~rP~~~r~~ 200 (451)
T 2yu1_A 122 TMAQWTRYYETPEE-EREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYC 200 (451)
T ss_dssp CHHHHHHHHTSCTT-TCCSCEEEEEECCTTSTTGGGCBCCHHHHHHCHHHHHSCGGGCC-----------CCSCCCCCEE
T ss_pred eHHHHHHHHhhccc-cccchhhhcccccccccccccccCchhhhhhhcccccCchhhhhhhhhhhhhcccccCCchheEE
Confidence 99999999987652 3467887 22 2222 24578887763 3442210 1011 11 3688
Q ss_pred EEcCCCCCCccccCCC--CCeeEEEEEEEeeecCCCccc
Q 019532 286 WFGPAGTVTPLHHDPH--HNILAQVSLYCALSQRTSTFR 322 (339)
Q Consensus 286 WiGp~gT~TPLH~Dp~--~Nll~QV~G~Kr~~~~~~~~~ 322 (339)
||||+||.|++|+|+. +|+++||.|+|+|-+++|+..
T Consensus 201 ~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~ 239 (451)
T 2yu1_A 201 LMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAH 239 (451)
T ss_dssp EEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHH
T ss_pred EEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcc
Confidence 9999999999999997 478999999999888887643
No 6
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=99.63 E-value=3.7e-16 Score=153.43 Aligned_cols=151 Identities=11% Similarity=0.090 Sum_probs=110.9
Q ss_pred cccccC--CCCHHHHHHhhhcCCCcEEEecCC---CCCccccCCCCHhHHHHHhC-CccEEEEecCccccCCceeeeecH
Q 019532 158 LVVKRS--ALSLEGFLSEYFLSGSPVIITDCM---AHWPARTNWNDLDYLKRVAG-DRTVPVEVGKNYLCQDWKQELIPF 231 (339)
Q Consensus 158 ~I~R~~--~~S~e~F~~~y~~~~~PvVI~g~~---~~WPA~~kWs~~dYL~~~~G-~r~VpVe~g~~y~~~~w~q~~mt~ 231 (339)
.|.+++ .++.+.|.+.. -++||||++.. ..||+ .+|+ .+|+++.+| ++.|||.-.. .. ....|+|
T Consensus 46 ~v~~i~g~d~t~~y~~~~~--~~~Pvli~~~~glg~~~P~-~~~t-v~~v~~~vG~d~~V~ViDv~--~Q---~~~~M~l 116 (397)
T 3kv9_A 46 IIIKMHGSQLTQRYLEKHG--FDVPIMVPKLDDLGLRLPS-PTFS-VMDVERYVGGDKVIDVIDVA--RQ---ADSKMTL 116 (397)
T ss_dssp TCEECCTTTCCHHHHHHHC--SCSCEEESSCTTSCCBCCC-TTCC-HHHHHHHHTTTSEEEEEETT--TT---EEEEEEH
T ss_pred eeecCCHHHhhHHHHHhcC--CCCcEEEecCccccCcCCC-CCCC-HHHHHHHhCCCceEeeeecC--cc---cCccccH
Confidence 456654 57777666543 48999999764 47999 7999 999999999 8999987422 11 2468999
Q ss_pred HHHHHHHHhCCCCCCccchhccchhhhhhHHhhhccCCCCccc---------cCC-C-C--CccceEEEcCCCCCCcccc
Q 019532 232 SQFLERIQSNGSSASVPTYLAQHQLFDQINELRNDICIPDYCF---------VGG-G-E--LRSLNAWFGPAGTVTPLHH 298 (339)
Q Consensus 232 ~eFl~~~~~~~~~~~~~~YLaq~~L~~qiP~L~~Di~iPdy~~---------~~~-~-~--~~~~n~WiGp~gT~TPLH~ 298 (339)
++|++.+.... ...+.|+-+..+.+. +|.+++.+|.++. ..+ . . .....+|||++||.|++|+
T Consensus 117 ~~yv~Y~~~~~--r~~~lnvislefs~~--~L~~~~~~P~~v~d~Dwv~~~wp~~~~~~rP~v~r~l~mGp~gS~T~~Hi 192 (397)
T 3kv9_A 117 HNYVKYFMNPN--RPKVLNVISLEFSDT--KMSELVEVPDIAKKLSWVENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHI 192 (397)
T ss_dssp HHHHHHHHCSS--CSSCEEEEEEECTTS--GGGGGCBCCHHHHHHCHHHHHCCTTCSSCCCCCSCEEEEECTTCEEEEEC
T ss_pred HHHHHHHhccC--CCccceecchhhccc--hhccCcCCCceeeccchhhhcCCchhccCCccceeEEEEcCCCCCCCEEE
Confidence 99999998774 566788876544432 3566666665432 000 0 1 1245899999999999999
Q ss_pred CCCCC--eeEEEEEEEeeecCCCcc
Q 019532 299 DPHHN--ILAQVSLYCALSQRTSTF 321 (339)
Q Consensus 299 Dp~~N--ll~QV~G~Kr~~~~~~~~ 321 (339)
|+..+ +++||.|+|+|.++.|+.
T Consensus 193 D~~gts~w~~vv~GrK~w~L~PPt~ 217 (397)
T 3kv9_A 193 DFGGTSVWYHVLWGEKIFYLIKPTD 217 (397)
T ss_dssp CGGGCEEEEEEEEEEEEEEEECCCH
T ss_pred CCCCCceeeeecCceEEEEEeCCcc
Confidence 99987 789999999988888754
No 7
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.62 E-value=5.3e-16 Score=156.59 Aligned_cols=150 Identities=11% Similarity=0.105 Sum_probs=110.4
Q ss_pred ccccc--CCCCHHHHHHhhhcCCCcEEEecCC---CCCccccCCCCHhHHHHHhC-CccEEEEecCccccCCceeeeecH
Q 019532 158 LVVKR--SALSLEGFLSEYFLSGSPVIITDCM---AHWPARTNWNDLDYLKRVAG-DRTVPVEVGKNYLCQDWKQELIPF 231 (339)
Q Consensus 158 ~I~R~--~~~S~e~F~~~y~~~~~PvVI~g~~---~~WPA~~kWs~~dYL~~~~G-~r~VpVe~g~~y~~~~w~q~~mt~ 231 (339)
-|.++ +.++.+.|.+.. -++||||++.. ..||+ .+|+ .+|+++.+| ++.|+|.-.. .. ....|+|
T Consensus 137 ~v~~~~~~~~~~~~~~~~~--~~~Pvli~~~~~lg~~~P~-~~~t-~~~v~~~~G~d~~V~V~Dv~--~Q---~~~~m~l 207 (488)
T 3kv5_D 137 IIIKMHGSQLTQRYLEKHG--FDVPIMVPKLDDLGLRLPS-PTFS-VMDVERYVGGDKVIDVIDVA--RQ---ADSKMTL 207 (488)
T ss_dssp TCEECCGGGCCHHHHHHHC--SCSCEEECSCTTTCCBCCC-TTCC-HHHHHHHHCTTCEEEEEETT--TT---EEEEEEH
T ss_pred eeeccccccchHHHHHhcC--CCCCEEEecCCCcCCcCCC-CCCc-HHHHHHHhCCCceeeeeecC--cc---ccccccH
Confidence 34444 356666665443 48999999754 57999 7999 999999999 8999987432 11 2368999
Q ss_pred HHHHHHHHhCCCCCCccchhccchhhhhhHHhhhccCCCCcccc---------CC-C-C--CccceEEEcCCCCCCcccc
Q 019532 232 SQFLERIQSNGSSASVPTYLAQHQLFDQINELRNDICIPDYCFV---------GG-G-E--LRSLNAWFGPAGTVTPLHH 298 (339)
Q Consensus 232 ~eFl~~~~~~~~~~~~~~YLaq~~L~~qiP~L~~Di~iPdy~~~---------~~-~-~--~~~~n~WiGp~gT~TPLH~ 298 (339)
++|++.+..+. ...+.|+.+..+.+ . +|.+++.+|.++.. .. . . .....+|||++||.|++|+
T Consensus 208 ~~yi~y~~~~~--r~~~~nv~slefs~-~-~L~~~~~~P~~~~~~d~~~~~wp~~~~~~rP~~~r~~~mG~~gS~T~~H~ 283 (488)
T 3kv5_D 208 HNYVKYFMNPN--RPKVLNVISLEFSD-T-KMSELVEVPDIAKKLSWVENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHI 283 (488)
T ss_dssp HHHHHHHHSSS--CSSCEEEEEEECTT-S-GGGGGCBCCHHHHHHCHHHHHCCTTCSSCCCCCSCEEEEECTTCEEEEEC
T ss_pred HHHHHHHhccC--Cccccccccccccc-c-hhhccCCCChhhhhhchhhhcCcccccccCcccceEEEEcCCCCCCCeEE
Confidence 99999998864 55677877655443 2 47777777776521 10 0 0 1235799999999999999
Q ss_pred CCCCC--eeEEEEEEEeeecCCCc
Q 019532 299 DPHHN--ILAQVSLYCALSQRTST 320 (339)
Q Consensus 299 Dp~~N--ll~QV~G~Kr~~~~~~~ 320 (339)
|++.| +++||.|+|+|.++.|+
T Consensus 284 D~~~t~~w~~vv~G~K~w~L~PPt 307 (488)
T 3kv5_D 284 DFGGTSVWYHVLWGEKIFYLIKPT 307 (488)
T ss_dssp CGGGCEEEEEEEEEEEEEEEECCC
T ss_pred CCCCCceeeeccCeeEEEEEeCCc
Confidence 99988 67999999998888874
No 8
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=99.62 E-value=5.7e-16 Score=150.85 Aligned_cols=151 Identities=12% Similarity=0.110 Sum_probs=108.1
Q ss_pred ccccc--CCCCHHHHHHhhhcCCCcEEEecCC---CCCccccCCCCHhHHHHHhC-CccEEEEecCccccCCceeeeecH
Q 019532 158 LVVKR--SALSLEGFLSEYFLSGSPVIITDCM---AHWPARTNWNDLDYLKRVAG-DRTVPVEVGKNYLCQDWKQELIPF 231 (339)
Q Consensus 158 ~I~R~--~~~S~e~F~~~y~~~~~PvVI~g~~---~~WPA~~kWs~~dYL~~~~G-~r~VpVe~g~~y~~~~w~q~~mt~ 231 (339)
-|.++ +.++.+.|.++. .++||||++.. ..||+. +|+ .+|+++.+| ++.|+|.-.. .. ....|+|
T Consensus 18 ~v~~i~~~d~t~~y~~~~~--~~~Pvli~~~~glg~~~P~~-~~t-v~~v~~~vG~d~~V~ViDv~--~Q---~~~~M~l 88 (371)
T 3k3o_A 18 VILKPTGNQLTVEFLEENS--FSVPILVLKKDGLGMTLPSP-SFT-VRDVEHYVGSDKEIDVIDVT--RQ---ADCKMKL 88 (371)
T ss_dssp TSBCCCTTTCCHHHHHHHT--TCSCEEESSCTTSCCBCCCT-TCC-HHHHHHHHCC-CEEEEEETT--TT---EEEEEEH
T ss_pred hcccCChhhCcHHHHHhcC--CCCCEEEecCcccCCcCCCC-CCC-HHHHHHHcCCCceEeeeecC--cC---CCccccH
Confidence 34444 356777776654 48999999754 579987 899 999999999 8999987432 22 2368999
Q ss_pred HHHHHHHHhCCCCCCccchhccchhhh-------hhHHhhhccC-----CCCccccCCCCCc--cceEEEcCCCCCCccc
Q 019532 232 SQFLERIQSNGSSASVPTYLAQHQLFD-------QINELRNDIC-----IPDYCFVGGGELR--SLNAWFGPAGTVTPLH 297 (339)
Q Consensus 232 ~eFl~~~~~~~~~~~~~~YLaq~~L~~-------qiP~L~~Di~-----iPdy~~~~~~~~~--~~n~WiGp~gT~TPLH 297 (339)
++|++.+..+. ...+.|+-+..+.+ +.|++.+|+. .|+-+. ...+ ..++|||++||.|++|
T Consensus 89 ~~y~dY~~~~~--re~~lnv~d~efs~~~L~~~~~~P~~~~d~d~~~~~wp~~~~---~~rP~~~r~l~mGp~gS~T~~H 163 (371)
T 3k3o_A 89 GDFVKYYYSGK--REKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEECV---FERPNVQKYCLMSVRDSYTDFH 163 (371)
T ss_dssp HHHHHHHTCTT--CCSCEEEEEEECTTSGGGGTCBCCHHHHHHCHHHHHSCSSCS---SCCCCCSCEEEEECTTEEEEEE
T ss_pred HHHHHHHhccC--CCCceeeechhccchhhhccccCCchhhhhhhhhhcCChhhh---ccCCCceeEEEEcCCCCCCCeE
Confidence 99999998764 56789997654443 3455554433 222111 1222 3589999999999999
Q ss_pred cCCCCC--eeEEEEEEEeeecCCCccc
Q 019532 298 HDPHHN--ILAQVSLYCALSQRTSTFR 322 (339)
Q Consensus 298 ~Dp~~N--ll~QV~G~Kr~~~~~~~~~ 322 (339)
+|++.| +++||.|+|+|-+++|+..
T Consensus 164 iD~~gts~w~~vv~GrK~w~L~PPt~~ 190 (371)
T 3k3o_A 164 IDFGGTSVWYHVLKGEKIFYLIRPTNA 190 (371)
T ss_dssp CCGGGCEEEEEEEEEEEEEEEECCCHH
T ss_pred ECCCCCceeEEEeeeEEEEEEECCCcc
Confidence 999987 6799999999888877543
No 9
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=99.56 E-value=4.6e-15 Score=145.36 Aligned_cols=146 Identities=12% Similarity=0.101 Sum_probs=107.9
Q ss_pred CCCHHHHHHhhhcCCCcEEEecCC---CCCccccCCCCHhHHHHHhC-CccEEEEecCccccCCceeeeecHHHHHHHHH
Q 019532 164 ALSLEGFLSEYFLSGSPVIITDCM---AHWPARTNWNDLDYLKRVAG-DRTVPVEVGKNYLCQDWKQELIPFSQFLERIQ 239 (339)
Q Consensus 164 ~~S~e~F~~~y~~~~~PvVI~g~~---~~WPA~~kWs~~dYL~~~~G-~r~VpVe~g~~y~~~~w~q~~mt~~eFl~~~~ 239 (339)
.++.+.|.++. -++|+||++.. ..||+ .+|+ .+|+++.+| ++.|+|.-.. .. ....|+|++|++++.
T Consensus 53 ~f~~~yl~~~g--~~~Pvli~~~~glgm~~P~-~~~t-v~~v~~~vG~d~~V~ViDv~--~Q---~~~~M~l~~yv~Y~~ 123 (392)
T 3pua_A 53 QLTLGYMEEHG--FTEPILVPKKDGLGLAVPA-PTFY-VSDVENYVGPERSVDVTDVT--KQ---KDCKMKLKEFVDYYY 123 (392)
T ss_dssp GCCHHHHHHHT--TCSCEEESSCTTTTCBCCC-TTCC-HHHHHHHHCTTCEEEEEETT--TT---EEEEEEHHHHHHHHT
T ss_pred hchHHHHHhcC--CCccEEEeCCccccCcCCC-CCCC-HHHHHHHcCCCcEEeeeecC--cC---cCccccHHHHHHHHh
Confidence 45555444432 38999999754 58998 7899 999999999 9999986432 12 246799999999998
Q ss_pred hCCCCCCccchhccchhhh-------hhHHhhhccC-----CCCccccCCCCCccceEEEcCCCCCCccccCCCCC--ee
Q 019532 240 SNGSSASVPTYLAQHQLFD-------QINELRNDIC-----IPDYCFVGGGELRSLNAWFGPAGTVTPLHHDPHHN--IL 305 (339)
Q Consensus 240 ~~~~~~~~~~YLaq~~L~~-------qiP~L~~Di~-----iPdy~~~~~~~~~~~n~WiGp~gT~TPLH~Dp~~N--ll 305 (339)
++. +..++|+-+..+.+ +.|++.+|+. .|+-+... ......++|||++|+.|++|.|+..+ ++
T Consensus 124 ~~~--re~~lnv~dlefs~t~L~~~~~~P~lv~d~d~v~~~wp~~~~~~-rP~v~r~~~mGp~gS~T~fHiD~~gTs~w~ 200 (392)
T 3pua_A 124 STN--RKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLA-KPKVTKYCLICVKDSYTDFHIDSGGASAWY 200 (392)
T ss_dssp CSS--CCSCEEEEEEECTTSGGGGGCBCCHHHHHHCHHHHHSCTTCSSC-CCSCSCEEEEECTTCEEEEECCGGGCEEEE
T ss_pred ccC--CCcceEeeecccccchhhccccCchhhhhhhhhhhccchhhhhc-CCCceeEEEEeCCCCCCCEeECCCCCceee
Confidence 774 67788988644333 4788888776 45433211 11125689999999999999999954 89
Q ss_pred EEEEEEEeeecCCCcc
Q 019532 306 AQVSLYCALSQRTSTF 321 (339)
Q Consensus 306 ~QV~G~Kr~~~~~~~~ 321 (339)
++|.|+|+|-+.+|+.
T Consensus 201 ~vi~GrK~w~L~PPt~ 216 (392)
T 3pua_A 201 HVLKGEKTFYLIRPAS 216 (392)
T ss_dssp EEEEEEEEEEEECCCH
T ss_pred eeccceEEEEEECCCc
Confidence 9999999988887754
No 10
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.55 E-value=6.2e-15 Score=147.07 Aligned_cols=145 Identities=12% Similarity=0.030 Sum_probs=109.2
Q ss_pred CCCHHHHHHhhhcCCCcEEEecCC---CCCccccCCCCHhHHHHHhC-CccEEEEecCccccCCceeeeecHHHHHHHHH
Q 019532 164 ALSLEGFLSEYFLSGSPVIITDCM---AHWPARTNWNDLDYLKRVAG-DRTVPVEVGKNYLCQDWKQELIPFSQFLERIQ 239 (339)
Q Consensus 164 ~~S~e~F~~~y~~~~~PvVI~g~~---~~WPA~~kWs~~dYL~~~~G-~r~VpVe~g~~y~~~~w~q~~mt~~eFl~~~~ 239 (339)
.++.+.|.++. -++|+||++.. ..||+. +|+ .+|+++.+| ++.|+|.-- ... ....|+|++|++.+.
T Consensus 110 ~~~~~~~~~~~--~~~Pvli~~~~glgm~~P~~-~~t-v~~v~~~~G~d~~V~ViDv--~~Q---~~~~M~l~~y~dy~~ 180 (447)
T 3kv4_A 110 QLTVEFLEENS--FSVPILVLKKDGLGMTLPSP-SFT-VRDVEHYVGSDKEIDVIDV--TRQ---ADCKMKLGDFVKYYY 180 (447)
T ss_dssp TCCHHHHHHTT--SCSCEEESSCTTSCCBCCCT-TCC-HHHHHHHHCTTCEEEEEET--TTT---EEEEEEHHHHHHHHH
T ss_pred hchHHHHHhcC--CCCCEEEecCcccCCcCCCc-cCC-HHHHHHHcCCCceEcceec--CcC---ccccccHHHHHHHHh
Confidence 44555554433 28999999544 689987 898 999999999 999998742 222 246899999999998
Q ss_pred hCCCCCCccchhccchhhhhhHHhhhccCCCCcccc------------CCCCC-ccceEEEcCCCCCCccccCCCCC--e
Q 019532 240 SNGSSASVPTYLAQHQLFDQINELRNDICIPDYCFV------------GGGEL-RSLNAWFGPAGTVTPLHHDPHHN--I 304 (339)
Q Consensus 240 ~~~~~~~~~~YLaq~~L~~qiP~L~~Di~iPdy~~~------------~~~~~-~~~n~WiGp~gT~TPLH~Dp~~N--l 304 (339)
.+. ...+.|+-+..+.+. +|.+|+.+|+++.. ....+ ...++|||++|+.|++|.|+..+ +
T Consensus 181 ~~~--r~~~lnv~d~efs~~--~L~~~~~~P~~~~~~D~~~~lw~~~~~~~rP~v~r~~~mG~~gS~T~~HiD~~~ts~w 256 (447)
T 3kv4_A 181 SGK--REKVLNVISLEFSDT--RLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSVW 256 (447)
T ss_dssp SSC--CSSCEEEEEEECTTS--GGGGGCBCCHHHHHHCHHHHHCCSCTTSCCCCCSCEEEEECTTEEEEEECCGGGCEEE
T ss_pred ccC--CCCceeecccccccc--hhhhccCCCceecccchhhhcccchhhccCCCceeEEEEeCCCCCCCeeECCCCCcee
Confidence 774 567899987655543 58888888887531 00111 14589999999999999999987 6
Q ss_pred eEEEEEEEeeecCCCcc
Q 019532 305 LAQVSLYCALSQRTSTF 321 (339)
Q Consensus 305 l~QV~G~Kr~~~~~~~~ 321 (339)
++||.|+|+|-+++|+.
T Consensus 257 ~~vi~GrK~w~L~PPt~ 273 (447)
T 3kv4_A 257 YHVLKGEKIFYLIRPTN 273 (447)
T ss_dssp EEEEESEEEEEEECCCH
T ss_pred EEEeeeEEEEEEeCCCc
Confidence 89999999988888753
No 11
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=99.54 E-value=5.2e-15 Score=143.35 Aligned_cols=148 Identities=14% Similarity=0.128 Sum_probs=95.8
Q ss_pred cccCCCCHHHHHHhhhcCCCcEEEecCCCCC-ccccCCCCHhHHHHHhCCc---cEEEEe-cCccccCCcee--e-eecH
Q 019532 160 VKRSALSLEGFLSEYFLSGSPVIITDCMAHW-PARTNWNDLDYLKRVAGDR---TVPVEV-GKNYLCQDWKQ--E-LIPF 231 (339)
Q Consensus 160 ~R~~~~S~e~F~~~y~~~~~PvVI~g~~~~W-PA~~kWs~~dYL~~~~G~r---~VpVe~-g~~y~~~~w~q--~-~mt~ 231 (339)
+++..+|+++|.++|. .++||||+|+ .+| ++ .|+ +++|.+.+++. ..+|++ +..+....|.. . .++.
T Consensus 23 ~ll~~is~e~F~~~yw-~kkPlvir~~-~~~~~~--l~s-~~~L~~l~~~~~v~~~~vrl~~~~~~~~~~~~~~g~~~~~ 97 (342)
T 1vrb_A 23 SIISPVTMSEFLEEYW-PVKPLVARGE-VERFTS--IPG-FEKVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSP 97 (342)
T ss_dssp HHHTTSCHHHHHHHTT-TTSCEEECCC-GGGGGG--STT-CGGGSSHHHHHHHCCSCEEEC-------------CEEECH
T ss_pred HHHcCCCHHHHHHHHh-ccCCEEEcCC-cccccC--CCC-HHHHHHHHhhcCcCcCceEEeCCCcCccccccCCCcccCH
Confidence 5678999999999999 7899999999 665 43 576 67776665542 234443 33332233533 2 5788
Q ss_pred HHHHHHHHhCCCCCCccchhcc-chhhhhhHHhhhccC-CCCccccCCCCCccceEEEcCCCCCCccccCCCCCeeEEEE
Q 019532 232 SQFLERIQSNGSSASVPTYLAQ-HQLFDQINELRNDIC-IPDYCFVGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVS 309 (339)
Q Consensus 232 ~eFl~~~~~~~~~~~~~~YLaq-~~L~~qiP~L~~Di~-iPdy~~~~~~~~~~~n~WiGp~gT~TPLH~Dp~~Nll~QV~ 309 (339)
++|.+.+..+ ..+++.+ +..+.++.+|.+++. +|.+.. . ......+|+||+|+.|++|+|+++||+|||.
T Consensus 98 ~~~~~l~~~g-----~tl~v~~~~~~~p~l~~l~~~~~~~~~~~~-~--~n~~~~~~~gp~g~~~~~H~D~~dnfl~Qv~ 169 (342)
T 1vrb_A 98 AEALEWYEKG-----AALEFDFTDLFIPQVRRWIEKLKAELRLPA-G--TSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQ 169 (342)
T ss_dssp HHHHHHHHTT-----CCEEECCGGGTCTHHHHHHHHHHHHTTCCT-T--CCEEEEEEEECSSCCCCSEECSSEEEEEEEE
T ss_pred HHHHHHHhCC-----CeEEECChhHhChHHHHHHHhhhhhcCCcc-c--ccccceEEEeCCCCCCCCeECChhcEEEEEE
Confidence 8997665432 2344443 344556667777774 344321 1 0001239999999999999999999999999
Q ss_pred EEEeeecC-CCc
Q 019532 310 LYCALSQR-TST 320 (339)
Q Consensus 310 G~Kr~~~~-~~~ 320 (339)
|+|++.++ .|+
T Consensus 170 G~Krw~L~~~P~ 181 (342)
T 1vrb_A 170 GEKTWKLAKNEN 181 (342)
T ss_dssp SCEEEEEECCSS
T ss_pred EEEEEEEecCCc
Confidence 99999888 554
No 12
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=99.37 E-value=1.9e-14 Score=143.81 Aligned_cols=151 Identities=19% Similarity=0.112 Sum_probs=85.0
Q ss_pred cCCCCHHHHHHhhhcCCCcEEEecCCCC-Ccccc-CCCCHhHHHHHhCCccEEE-Eec-CccccCCceeeeecHHHHHH-
Q 019532 162 RSALSLEGFLSEYFLSGSPVIITDCMAH-WPART-NWNDLDYLKRVAGDRTVPV-EVG-KNYLCQDWKQELIPFSQFLE- 236 (339)
Q Consensus 162 ~~~~S~e~F~~~y~~~~~PvVI~g~~~~-WPA~~-kWs~~dYL~~~~G~r~VpV-e~g-~~y~~~~w~q~~mt~~eFl~- 236 (339)
+..+|.++|.++|. .++|++|++...+ |+++. .|+ +++|.+.++++.++. .+. .+|.+..|. ..++-+.|..
T Consensus 23 l~~is~e~F~~~yw-~kkPllIr~~~~~~~~~f~~l~s-~~~L~~La~~~~v~~~~v~~~r~~~g~~~-~~~~~g~~~~~ 99 (442)
T 2xdv_A 23 ISPIKTETFFKEFW-EQKPLLIQRDDPALATYYGSLFK-LTDLKSLCSRGMYYGRDVNVCRCVNGKKK-VLNKDGKAHFL 99 (442)
T ss_dssp TTTSCHHHHHHHTT-TTSCEEECCCCHHHHHHHHHHCC-HHHHSSCC---------------------------------
T ss_pred hcCCCHHHHHHHhh-hhCcEEeecCCcchhhhhcCcCC-HHHHHHHHccCcccccccceeeecCCcce-eecCCCccCHH
Confidence 56889999999998 4799999998765 99985 576 999999888766652 222 234443332 1112222211
Q ss_pred HHHhCCCCCCccchhccchhhhhhHHhhhccCCCCccccCCCCCccceEEEcCCCCCC-ccccCCCCCeeEEEEEEEeee
Q 019532 237 RIQSNGSSASVPTYLAQHQLFDQINELRNDICIPDYCFVGGGELRSLNAWFGPAGTVT-PLHHDPHHNILAQVSLYCALS 315 (339)
Q Consensus 237 ~~~~~~~~~~~~~YLaq~~L~~qiP~L~~Di~iPdy~~~~~~~~~~~n~WiGp~gT~T-PLH~Dp~~Nll~QV~G~Kr~~ 315 (339)
.+...- .....-|..++++..+|.|.. + .+.+...-+.....|+|+|++|+++ |+|+|.++||++||.|+|++.
T Consensus 100 ~l~~~~--~~~g~tL~l~~~~~~~p~L~~-l--~~~l~~~~g~~~~~n~y~~~~g~~g~~~H~D~~dvf~~Qv~G~Krw~ 174 (442)
T 2xdv_A 100 QLRKDF--DQKRATIQFHQPQRFKDELWR-I--QEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWR 174 (442)
T ss_dssp ---CCE--EEETTEEEEECGGGTCHHHHH-H--HHHHHHHHTSCCEEEEEEECTTCBCSCSEECSSEEEEEEEESCEEEE
T ss_pred HHHHHh--ccCCcEEEeCchhhhhhHHHH-H--HHHHHHHhCCCcccceEECCCCCCCccceECCcceEEEEEEeEEEEE
Confidence 111000 001111334456666777641 1 1110000123456899999999998 999999999999999999988
Q ss_pred cCCCc
Q 019532 316 QRTST 320 (339)
Q Consensus 316 ~~~~~ 320 (339)
.+.+.
T Consensus 175 l~~p~ 179 (442)
T 2xdv_A 175 LYHPT 179 (442)
T ss_dssp EECCS
T ss_pred EccCC
Confidence 88775
No 13
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=98.73 E-value=7.8e-09 Score=103.82 Aligned_cols=143 Identities=10% Similarity=0.059 Sum_probs=78.6
Q ss_pred cCCCCHHHHHHhhhcCCCcEEEecCCCCC-ccccCCCCHhHHHHHhC---CccEEEEecCccccCCceee----eecHHH
Q 019532 162 RSALSLEGFLSEYFLSGSPVIITDCMAHW-PARTNWNDLDYLKRVAG---DRTVPVEVGKNYLCQDWKQE----LIPFSQ 233 (339)
Q Consensus 162 ~~~~S~e~F~~~y~~~~~PvVI~g~~~~W-PA~~kWs~~dYL~~~~G---~r~VpVe~g~~y~~~~w~q~----~mt~~e 233 (339)
+..+++++|+++|. .++|++|++...++ ...=.|.+.+-|....+ ...|++.. |.+..|... ...-..
T Consensus 51 l~pis~e~Fl~~yW-qKkPLlIr~~~p~~f~~L~S~~~l~~Ll~~~~v~~g~~v~~~~---y~~g~~~~~n~~g~~~p~~ 126 (489)
T 4diq_A 51 IAPMPPDHFYRRLW-EREAVLVRRQDHTYYQGLFSTADLDSMLRNEEVQFGQHLDAAR---YINGRRETLNPPGRALPAA 126 (489)
T ss_dssp HTTSCHHHHHHHTT-TTCCEEECCSCTTTTTTSCCHHHHHHHHHHSCCBBTTTEEEEE---EETTEEEECCCSSBCCHHH
T ss_pred hCCCCHHHHHHHHH-hhCcEEEecCCcccccCCCCHHHHHHHHHhcCcccCcccceEE---EeCCeeEeeCCCCccCHHH
Confidence 45779999999997 68999999876443 21112333333433222 12344431 222222111 011122
Q ss_pred HHHHHHhCCCCCCccchhccchhhhhhHHhhh---ccCCCCccccCCCCCccceEEEcCCCCCC-ccccCCCCCeeEEEE
Q 019532 234 FLERIQSNGSSASVPTYLAQHQLFDQINELRN---DICIPDYCFVGGGELRSLNAWFGPAGTVT-PLHHDPHHNILAQVS 309 (339)
Q Consensus 234 Fl~~~~~~~~~~~~~~YLaq~~L~~qiP~L~~---Di~iPdy~~~~~~~~~~~n~WiGp~gT~T-PLH~Dp~~Nll~QV~ 309 (339)
--+.+.... ++-|.+ .+.-+|.+.. .+ -.++ +.....|+|++|+|+++ ++|+|+++||++||.
T Consensus 127 vw~ll~~G~-----Tl~L~~--~~~f~p~l~~l~~~L--e~~f----g~~v~~N~Y~tp~Gs~g~~pH~D~~DvFllQv~ 193 (489)
T 4diq_A 127 AWSLYQAGC-----SLRLLC--PQAFSTTVWQFLAVL--QEQF----GSMAGSNVYLTPPNSQGFAPHYDDIEAFVLQLE 193 (489)
T ss_dssp HHHHHHTTC-----EEEESC--GGGTCHHHHHHHHHH--HHHH----TSCEEEEEEEECSSBCCSCCBCCSSEEEEEEEE
T ss_pred HHHHHhCCC-----eEEECC--hhhcChHHHHHHHHH--HHHh----CCcccceEEecCCCcccccCccCCcceEEEEEe
Confidence 222222221 233322 2223343321 11 0111 22346799999999986 999999999999999
Q ss_pred EEEeeecCCCcc
Q 019532 310 LYCALSQRTSTF 321 (339)
Q Consensus 310 G~Kr~~~~~~~~ 321 (339)
|+|++..+.+..
T Consensus 194 G~KrWrL~~P~~ 205 (489)
T 4diq_A 194 GRKLWRVYRPRA 205 (489)
T ss_dssp ECEEEEEECCSS
T ss_pred eEEEEEEeCCCC
Confidence 999988887654
No 14
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.01 E-value=1.4e-05 Score=80.67 Aligned_cols=147 Identities=14% Similarity=0.091 Sum_probs=92.7
Q ss_pred CHHHHHHhhhcC------CCcEEEec---CCCCCccccCCCCHhHHHHHhC-CccEEEEecCccccCCceeeeecHHHHH
Q 019532 166 SLEGFLSEYFLS------GSPVIITD---CMAHWPARTNWNDLDYLKRVAG-DRTVPVEVGKNYLCQDWKQELIPFSQFL 235 (339)
Q Consensus 166 S~e~F~~~y~~~------~~PvVI~g---~~~~WPA~~kWs~~dYL~~~~G-~r~VpVe~g~~y~~~~w~q~~mt~~eFl 235 (339)
+-.+|..+|... .+|+++++ +--.-|.- ..+ .+.+.+..| ++.|.|-- .++. ....||+++|+
T Consensus 152 dG~~f~~~~~~~~g~~~f~~p~lv~~~dgLgm~~P~~-~ft-v~dV~~~vG~d~~VdVID--V~tQ---~~~~mtl~~~~ 224 (528)
T 3pur_A 152 DGYEFRREFEKLGGADNWGKVFMVKDMDGLNMTMPKP-GFD-LEDVVKIMGSDYEVDTID--VYNQ---STYSMKLDTFR 224 (528)
T ss_dssp EHHHHHHHHHHTTCGGGCCSEEEEEECTTSCCCCCCT-TCC-HHHHHHHHCTTCEEEEEE--TTTT---EEEEEEHHHHH
T ss_pred CchhhHHHHHhhcCcccCCeeEEEeccccCCCCCCCC-CCC-HHHHHHhhCCCceEeeEE--CCCC---CCCcCcHHHHH
Confidence 456777666543 37999984 33334431 344 788888887 77777642 2332 23679999999
Q ss_pred HHHHhCCCCCCccchhccchhhhhhHHhhhccCCCCcccc---------CC-----------------CCCc--cceEEE
Q 019532 236 ERIQSNGSSASVPTYLAQHQLFDQINELRNDICIPDYCFV---------GG-----------------GELR--SLNAWF 287 (339)
Q Consensus 236 ~~~~~~~~~~~~~~YLaq~~L~~qiP~L~~Di~iPdy~~~---------~~-----------------~~~~--~~n~Wi 287 (339)
+++.... ......++-+..+. +.|.|.+.+..|.+... .. ++.+ ...++|
T Consensus 225 ~yf~~~~-~R~~i~NviSLEfS-~~~~L~~~v~~P~~Vr~ld~v~~~Wp~~~~~~~~~~~~~~~~~~~~~rP~v~rf~lm 302 (528)
T 3pur_A 225 KLFRDTK-NRPLLYNFLSLEFS-DNNEMKEIAKPPRFVQEISMVNRLWPDVSGAEYIKLLQREEYLPEDQRPKVEQFCLA 302 (528)
T ss_dssp HHHHCCS-CCSSCEEECCEECT-TSTTHHHHSCCCHHHHHHCHHHHHSCCC-------------CCCGGGSCCCSSEEEE
T ss_pred HHhcCcc-ccceeeEEeeEEec-CchhhhccccCCcEEecccHHHHhcCcccchhhhhhhhcccccccccCCCeeEEEEE
Confidence 9998743 23334555433332 22344444444443210 00 0111 357889
Q ss_pred cCCCCCCccccCCCC--CeeEEEEEEEeeecCCCcc
Q 019532 288 GPAGTVTPLHHDPHH--NILAQVSLYCALSQRTSTF 321 (339)
Q Consensus 288 Gp~gT~TPLH~Dp~~--Nll~QV~G~Kr~~~~~~~~ 321 (339)
|++|+.|++|.|+.. ++++++.|+|+|-+.+|+.
T Consensus 303 g~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~ 338 (528)
T 3pur_A 303 GMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTE 338 (528)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCH
T ss_pred eCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCc
Confidence 999999999999985 5799999999988888753
No 15
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=96.74 E-value=0.00074 Score=65.64 Aligned_cols=136 Identities=16% Similarity=0.246 Sum_probs=84.8
Q ss_pred CHHHHHHhhhcCCCcEEEecCCCCCccccCCCCHhHHHHHhCCccEEEEecCccccCCceeeeecHHHHHHHHHhCCC--
Q 019532 166 SLEGFLSEYFLSGSPVIITDCMAHWPARTNWNDLDYLKRVAGDRTVPVEVGKNYLCQDWKQELIPFSQFLERIQSNGS-- 243 (339)
Q Consensus 166 S~e~F~~~y~~~~~PvVI~g~~~~WPA~~kWs~~dYL~~~~G~r~VpVe~g~~y~~~~w~q~~mt~~eFl~~~~~~~~-- 243 (339)
+...|++.. ..++|||++|+...-.. ..|+ ++|+.+.+|+..+.+- + ..+|....+++++|.+.+.....
T Consensus 23 n~~~Fq~hW-~~GePViVs~V~~~~~~-~~W~-Pe~~~~~~gd~~~~li---d--C~~~~~~~i~v~~Ff~Gf~~~~~r~ 94 (392)
T 2ypd_A 23 NWKLFKECW-KQGQPAVVSGVHKKMNI-SLWK-AESISLDFGDHQADLL---N--CKDSIISNANVKEFWDGFEEVSKRQ 94 (392)
T ss_dssp HHHHHHHHH-TTTCCEEECCHHHHSCG-GGGS-HHHHHHHHTTSCCCCE---E--TTTCCBCSCCHHHHHHTSSBGGGC-
T ss_pred cHHHHHHHH-hCCCcEEEechhhhCcC-CccC-HHHHHHHhcCceeeee---e--CCCCccccCcHHHHhhhccccccCC
Confidence 467898755 58999999998653332 3698 9999999998765432 1 23456678999999998754221
Q ss_pred ----CCCccchhccch----hhhhhHHhhhc----cCCCCccccCCCCC--------------ccceEEE--cC------
Q 019532 244 ----SASVPTYLAQHQ----LFDQINELRND----ICIPDYCFVGGGEL--------------RSLNAWF--GP------ 289 (339)
Q Consensus 244 ----~~~~~~YLaq~~----L~~qiP~L~~D----i~iPdy~~~~~~~~--------------~~~n~Wi--Gp------ 289 (339)
.....+-|.+|+ +.+.+|...+| +++|+|+-.. |.+ --+.+|+ |.
T Consensus 95 ~~~~g~p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlpEYt~p~-G~LNLAs~LP~~~~kPDLGPK~YiAYG~~~~~~~ 173 (392)
T 2ypd_A 95 KNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDH 173 (392)
T ss_dssp -----CCCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSHHHHSTT-CTTCCTTTSCGGGCC---CCEEEEECCSTTTTCT
T ss_pred cCCCCCcceeeecCCCChHHHHHHhHHHHHHHHHcCCchHhhCCC-ccchHHHhCCCCCCCCCCCcchhhhcCcchhccc
Confidence 122344555653 22234554444 5688887542 211 1234554 32
Q ss_pred CCCCCccccCCCCCeeEEEEE
Q 019532 290 AGTVTPLHHDPHHNILAQVSL 310 (339)
Q Consensus 290 ~gT~TPLH~Dp~~Nll~QV~G 310 (339)
.-++|.||.|-.+-+.++++-
T Consensus 174 ~~gvT~LH~DmsDaVNiL~h~ 194 (392)
T 2ypd_A 174 DIGTTNLHIEVSDVVNILVYV 194 (392)
T ss_dssp TCCSEEEEECSSEEEEEEEEE
T ss_pred CCCcceeeeehhhhhhhhhee
Confidence 235899999999765555554
No 16
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=53.59 E-value=41 Score=33.89 Aligned_cols=66 Identities=11% Similarity=0.153 Sum_probs=41.7
Q ss_pred HHhhhcCCCc-EEEecCCC--CCccccCCCCHhHHHHHhCCccEEEEec------Cccc----cCCce----eeeecHHH
Q 019532 171 LSEYFLSGSP-VIITDCMA--HWPARTNWNDLDYLKRVAGDRTVPVEVG------KNYL----CQDWK----QELIPFSQ 233 (339)
Q Consensus 171 ~~~y~~~~~P-vVI~g~~~--~WPA~~kWs~~dYL~~~~G~r~VpVe~g------~~y~----~~~w~----q~~mt~~e 233 (339)
.+-+..++.| +||+|+.. .|.- ...+ .+-|.+..|+..|+|... .++. ...|. +..+|+.+
T Consensus 87 ~~~c~~~~~pi~vIrgl~~~l~ld~-~lFs-~~~L~~~~~~~~i~vr~Q~~q~~~~N~~~~~~~~~W~~~s~~~~~ti~k 164 (531)
T 3avr_A 87 HQFCTNPNNPVTVIRGLAGALKLDL-GLFS-TKTLVEANNEHMVEVRTQLLQPADENWDPTGTKKIWHCESNRSHTTIAK 164 (531)
T ss_dssp HHHHHCTTCSEEEEETHHHHHTCCG-GGGS-HHHHHHHCTTCEEEEEEEECCCTTCCBCTTSSSBCSBCCEEEEEEEHHH
T ss_pred HHHhcCCCCCeEEEccchhccCcCc-ccCC-HHHHHHhCCCCeeeeeecCCCCCCcCccccCCceeeeeccccCcccHHH
Confidence 3334456899 88999864 1221 2344 678899999999999862 1222 22353 44688988
Q ss_pred HHHHH
Q 019532 234 FLERI 238 (339)
Q Consensus 234 Fl~~~ 238 (339)
|.+..
T Consensus 165 ya~yq 169 (531)
T 3avr_A 165 YAQYQ 169 (531)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87753
No 17
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=39.01 E-value=43 Score=31.69 Aligned_cols=73 Identities=18% Similarity=0.175 Sum_probs=45.8
Q ss_pred CCCHHHHHHhhhcCCCc-EEEecCCCC--CccccCCCCHhHHHHHhCCccEEEEecC------c----cccCCc----ee
Q 019532 164 ALSLEGFLSEYFLSGSP-VIITDCMAH--WPARTNWNDLDYLKRVAGDRTVPVEVGK------N----YLCQDW----KQ 226 (339)
Q Consensus 164 ~~S~e~F~~~y~~~~~P-vVI~g~~~~--WPA~~kWs~~dYL~~~~G~r~VpVe~g~------~----y~~~~w----~q 226 (339)
..|+ .+.+-+..++.| +||+|+++- +. ....+ .+-|.+..|+..|.|.... + +....| .+
T Consensus 23 a~s~-~l~~~~~~~~~pi~vIrgl~~~l~ld-~~lFs-~~~L~~~~~~~~i~vr~Q~~q~~~~N~~~~~~~~~W~~~~~~ 99 (332)
T 2xxz_A 23 AFSP-VLLQFCTDPRNPITVIRGLAGSLRLN-LGLFS-TKTLVEASGEHTVEVRTQVQQPSDENWDLTGTRQIWPCESSR 99 (332)
T ss_dssp TSSH-HHHHHHHCTTCSEEEEESHHHHHTCC-GGGGS-HHHHHHHHTTCEEEEEEEECCCTTCCBCTTSSSBCSBCCCEE
T ss_pred hcCH-HHHHHhcCCCCCeEEEcchhhhhCcC-hhhCC-HHHHHHhCCCCeeeeeecCCCCCcccccCCCCcccccccccc
Confidence 4454 333334456899 899998641 21 12344 6778999999999988522 1 222234 25
Q ss_pred eeecHHHHHHHHH
Q 019532 227 ELIPFSQFLERIQ 239 (339)
Q Consensus 227 ~~mt~~eFl~~~~ 239 (339)
..+|+.+|.+...
T Consensus 100 ~~~ti~kya~yq~ 112 (332)
T 2xxz_A 100 SHTTIAKYAQYQA 112 (332)
T ss_dssp EEEEHHHHHHHHH
T ss_pred ccccHHHHHHHHH
Confidence 6899999987654
No 18
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=29.77 E-value=31 Score=24.13 Aligned_cols=21 Identities=19% Similarity=0.480 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhhhccccCCC
Q 019532 40 RAAEAARDLAWEQLHSGPWHS 60 (339)
Q Consensus 40 ~~~~~~~~~a~ekL~~g~w~~ 60 (339)
+.+++++.--.|-+..|||.+
T Consensus 8 eq~~aILkaLdeaIe~GPWe~ 28 (57)
T 3fxd_A 8 EQKETILKALNDAIEKGPWDK 28 (57)
T ss_dssp HHHHHHHHHHHHHHHHSCTTS
T ss_pred HHHHHHHHHHHHHHHcCCchH
Confidence 568888888899999999998
No 19
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=25.06 E-value=39 Score=29.13 Aligned_cols=38 Identities=16% Similarity=0.003 Sum_probs=30.7
Q ss_pred ccceEEEcCCCCCCccccCCCCCeeEEEEEEEeeecCC
Q 019532 281 RSLNAWFGPAGTVTPLHHDPHHNILAQVSLYCALSQRT 318 (339)
Q Consensus 281 ~~~n~WiGp~gT~TPLH~Dp~~Nll~QV~G~Kr~~~~~ 318 (339)
+.+-+|+|++++.+..|+|+.+=++-|+.|.=.+...+
T Consensus 34 ~~~V~~vgGPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d 71 (176)
T 1zvf_A 34 GFTVMIVGGPNERTDYHINPTPEWFYQKKGSMLLKVVD 71 (176)
T ss_dssp SEEEEEECSSBCCSCEEECSSCEEEEEEESCEEEEEEE
T ss_pred CEEEEEEcCCCcCCcCcCCCCceEEEEEeCEEEEEEEc
Confidence 45678999999999999999999999988875544433
No 20
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=20.88 E-value=55 Score=25.53 Aligned_cols=25 Identities=12% Similarity=-0.001 Sum_probs=17.9
Q ss_pred HHhhhccCccHHHHHHHhHhHhhcc
Q 019532 76 GAKYHYRNGEFKEALRVLDMGVLMG 100 (339)
Q Consensus 76 ~a~~~~~~~~~~~~i~~lD~~limg 100 (339)
.+.++...++..+|+..++.+|-+.
T Consensus 69 la~~~~~~~~~~~A~~~~~~al~~~ 93 (162)
T 3rkv_A 69 MSQCYLNIGDLHEAEETSSEVLKRE 93 (162)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHhcCcHHHHHHHHHHHHhcC
Confidence 3444445677888888888888774
Done!