Query 019535
Match_columns 339
No_of_seqs 146 out of 1592
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 02:32:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019535.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019535hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1062 AdhC Zn-dependent alco 100.0 6E-55 1.3E-59 377.4 28.8 312 20-337 54-366 (366)
2 KOG0022 Alcohol dehydrogenase, 100.0 3.2E-54 6.9E-59 366.9 28.8 318 17-337 57-375 (375)
3 COG1064 AdhP Zn-dependent alco 100.0 3.1E-53 6.6E-58 374.7 28.1 283 18-338 54-338 (339)
4 KOG0024 Sorbitol dehydrogenase 100.0 2.2E-51 4.8E-56 352.1 26.4 300 10-339 50-354 (354)
5 cd08281 liver_ADH_like1 Zinc-d 100.0 4.9E-45 1.1E-49 338.6 32.4 311 20-335 60-370 (371)
6 KOG0023 Alcohol dehydrogenase, 100.0 1.2E-45 2.6E-50 316.1 25.4 290 19-338 63-355 (360)
7 cd08300 alcohol_DH_class_III c 100.0 4.8E-44 1E-48 331.6 32.3 315 19-336 54-368 (368)
8 TIGR03451 mycoS_dep_FDH mycoth 100.0 3.6E-44 7.8E-49 331.3 31.1 303 20-336 53-357 (358)
9 PLN02740 Alcohol dehydrogenase 100.0 4.7E-44 1E-48 333.0 31.3 314 19-337 63-381 (381)
10 TIGR02818 adh_III_F_hyde S-(hy 100.0 5.8E-44 1.3E-48 330.9 31.7 316 19-337 53-368 (368)
11 cd08239 THR_DH_like L-threonin 100.0 1.4E-43 3.1E-48 325.2 31.3 286 20-337 53-339 (339)
12 cd08301 alcohol_DH_plants Plan 100.0 3.6E-43 7.7E-48 326.1 32.4 314 19-336 54-369 (369)
13 PRK09880 L-idonate 5-dehydroge 100.0 3.6E-43 7.8E-48 322.8 30.7 286 19-337 57-343 (343)
14 PLN02827 Alcohol dehydrogenase 100.0 1E-42 2.3E-47 323.3 30.3 314 20-338 62-377 (378)
15 COG1063 Tdh Threonine dehydrog 100.0 3.9E-42 8.5E-47 314.9 31.1 292 20-337 53-350 (350)
16 cd08277 liver_alcohol_DH_like 100.0 7.7E-42 1.7E-46 316.5 31.4 313 19-336 53-365 (365)
17 PRK10309 galactitol-1-phosphat 100.0 1.1E-41 2.4E-46 313.6 31.0 289 20-337 52-346 (347)
18 TIGR03366 HpnZ_proposed putati 100.0 3.5E-42 7.6E-47 307.5 25.2 270 24-318 1-280 (280)
19 TIGR02819 fdhA_non_GSH formald 100.0 2.7E-41 5.8E-46 314.5 30.6 296 20-338 60-391 (393)
20 TIGR03201 dearomat_had 6-hydro 100.0 8.2E-41 1.8E-45 307.9 30.7 287 19-337 51-349 (349)
21 PLN02586 probable cinnamyl alc 100.0 6.8E-41 1.5E-45 309.3 29.7 282 20-337 65-353 (360)
22 PLN02178 cinnamyl-alcohol dehy 100.0 1.4E-40 3.1E-45 308.1 29.8 282 20-337 59-348 (375)
23 COG0604 Qor NADPH:quinone redu 100.0 4E-41 8.6E-46 304.4 25.0 266 18-337 54-326 (326)
24 cd08231 MDR_TM0436_like Hypoth 100.0 9.3E-40 2E-44 302.4 31.4 300 19-337 52-361 (361)
25 cd08233 butanediol_DH_like (2R 100.0 2.6E-39 5.7E-44 298.3 31.4 283 20-335 63-350 (351)
26 cd05279 Zn_ADH1 Liver alcohol 100.0 6E-39 1.3E-43 297.2 31.8 311 19-335 51-364 (365)
27 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.8E-39 3.9E-44 296.3 27.7 272 20-335 55-328 (329)
28 cd08299 alcohol_DH_class_I_II_ 100.0 2.1E-38 4.5E-43 294.2 32.7 314 20-337 59-373 (373)
29 cd08230 glucose_DH Glucose deh 100.0 8.6E-39 1.9E-43 295.2 29.5 282 20-337 56-355 (355)
30 PLN02514 cinnamyl-alcohol dehy 100.0 7.8E-38 1.7E-42 288.8 30.1 286 20-338 62-351 (357)
31 KOG1197 Predicted quinone oxid 100.0 1E-38 2.3E-43 264.3 21.1 263 18-338 61-331 (336)
32 cd08278 benzyl_alcohol_DH Benz 100.0 2.5E-37 5.4E-42 286.4 31.1 312 19-336 53-365 (365)
33 cd08285 NADP_ADH NADP(H)-depen 100.0 7.8E-37 1.7E-41 281.8 31.2 293 19-337 51-351 (351)
34 PRK10083 putative oxidoreducta 100.0 1.8E-36 3.9E-41 278.1 30.3 284 20-339 52-339 (339)
35 cd08296 CAD_like Cinnamyl alco 100.0 2.8E-36 6E-41 276.2 29.7 279 20-336 53-333 (333)
36 cd08237 ribitol-5-phosphate_DH 100.0 7.2E-37 1.6E-41 280.6 24.7 272 19-338 56-340 (341)
37 cd08238 sorbose_phosphate_red 100.0 5.4E-36 1.2E-40 281.3 29.9 279 20-338 61-369 (410)
38 cd05284 arabinose_DH_like D-ar 100.0 1E-35 2.3E-40 273.1 30.3 283 18-337 54-340 (340)
39 cd08279 Zn_ADH_class_III Class 100.0 2.1E-35 4.5E-40 273.4 31.7 311 19-335 51-362 (363)
40 cd08286 FDH_like_ADH2 formalde 100.0 1.6E-35 3.5E-40 272.4 30.5 287 20-337 53-345 (345)
41 cd08283 FDH_like_1 Glutathione 100.0 2.2E-35 4.8E-40 275.2 31.0 303 20-337 53-386 (386)
42 cd08265 Zn_ADH3 Alcohol dehydr 100.0 4.9E-35 1.1E-39 272.8 30.6 289 19-335 85-383 (384)
43 cd08256 Zn_ADH2 Alcohol dehydr 100.0 5.8E-35 1.2E-39 269.3 29.6 284 20-335 61-350 (350)
44 cd05278 FDH_like Formaldehyde 100.0 5.3E-35 1.2E-39 269.1 29.2 290 19-336 52-346 (347)
45 cd05285 sorbitol_DH Sorbitol d 100.0 1.2E-34 2.6E-39 266.4 29.9 282 20-335 53-341 (343)
46 cd08246 crotonyl_coA_red croto 100.0 8.6E-35 1.9E-39 272.1 29.1 284 23-336 83-392 (393)
47 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.4E-34 3E-39 268.4 29.9 310 20-336 52-367 (367)
48 cd08260 Zn_ADH6 Alcohol dehydr 100.0 3.4E-34 7.5E-39 263.6 31.0 288 20-336 53-344 (345)
49 PLN02702 L-idonate 5-dehydroge 100.0 6E-34 1.3E-38 263.8 31.4 286 20-336 72-363 (364)
50 TIGR01202 bchC 2-desacetyl-2-h 100.0 6.2E-35 1.3E-39 264.1 24.1 251 20-336 57-308 (308)
51 cd08240 6_hydroxyhexanoate_dh_ 100.0 5.1E-34 1.1E-38 262.9 29.9 285 19-336 64-349 (350)
52 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.1E-33 2.4E-38 259.3 31.4 283 20-337 52-337 (337)
53 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 8.7E-34 1.9E-38 259.9 30.6 284 18-337 53-338 (338)
54 cd08284 FDH_like_2 Glutathione 100.0 8.2E-34 1.8E-38 260.9 30.4 289 20-336 52-343 (344)
55 cd08287 FDH_like_ADH3 formalde 100.0 8.8E-34 1.9E-38 260.8 30.5 286 20-337 52-345 (345)
56 PLN03154 putative allyl alcoho 100.0 3.3E-34 7.2E-39 263.5 27.6 260 20-338 71-346 (348)
57 cd08235 iditol_2_DH_like L-idi 100.0 8.7E-34 1.9E-38 260.6 30.3 285 20-336 52-343 (343)
58 PRK05396 tdh L-threonine 3-deh 100.0 1.2E-33 2.7E-38 259.5 30.3 285 20-338 56-341 (341)
59 cd08282 PFDH_like Pseudomonas 100.0 2.4E-33 5.2E-38 260.7 31.6 294 20-337 52-375 (375)
60 TIGR01751 crot-CoA-red crotony 100.0 1.5E-33 3.2E-38 264.0 30.4 284 24-338 80-388 (398)
61 cd08242 MDR_like Medium chain 100.0 2.3E-33 5E-38 255.3 28.5 269 20-337 49-319 (319)
62 cd08232 idonate-5-DH L-idonate 100.0 3E-33 6.4E-38 256.7 29.3 285 20-337 52-339 (339)
63 cd05283 CAD1 Cinnamyl alcohol 100.0 1.5E-33 3.2E-38 258.6 27.2 285 19-336 51-337 (337)
64 TIGR00692 tdh L-threonine 3-de 100.0 4.1E-33 8.9E-38 255.9 29.9 285 20-337 54-340 (340)
65 cd08291 ETR_like_1 2-enoyl thi 100.0 2.4E-33 5.2E-38 255.8 27.4 258 19-335 58-323 (324)
66 PRK09422 ethanol-active dehydr 100.0 6.6E-33 1.4E-37 254.3 30.2 282 21-338 53-337 (338)
67 PRK13771 putative alcohol dehy 100.0 2.8E-33 6.1E-38 256.3 27.4 281 18-337 51-333 (334)
68 cd08266 Zn_ADH_like1 Alcohol d 100.0 7.2E-33 1.6E-37 253.7 29.4 284 20-337 56-342 (342)
69 KOG0025 Zn2+-binding dehydroge 100.0 2.5E-33 5.4E-38 236.5 23.4 275 5-337 57-352 (354)
70 cd08262 Zn_ADH8 Alcohol dehydr 100.0 1.2E-32 2.6E-37 252.9 29.7 274 20-336 62-341 (341)
71 cd08297 CAD3 Cinnamyl alcohol 100.0 1.8E-32 3.8E-37 251.8 30.8 283 20-337 55-341 (341)
72 cd05281 TDH Threonine dehydrog 100.0 1.2E-32 2.5E-37 253.0 29.3 284 20-337 56-341 (341)
73 cd08236 sugar_DH NAD(P)-depend 100.0 1.8E-32 3.8E-37 252.0 29.9 287 20-335 51-343 (343)
74 cd08274 MDR9 Medium chain dehy 100.0 1.6E-32 3.5E-37 252.9 28.9 274 18-337 74-350 (350)
75 cd08234 threonine_DH_like L-th 100.0 4.2E-32 9E-37 248.5 30.1 281 20-335 51-333 (334)
76 cd08293 PTGR2 Prostaglandin re 100.0 2.6E-32 5.6E-37 251.1 28.1 261 19-337 66-345 (345)
77 TIGR02825 B4_12hDH leukotriene 100.0 1.5E-32 3.2E-37 250.7 25.4 255 20-336 56-325 (325)
78 cd08264 Zn_ADH_like2 Alcohol d 100.0 3.4E-32 7.4E-37 248.2 25.9 268 20-331 53-321 (325)
79 cd08292 ETR_like_2 2-enoyl thi 100.0 7.9E-32 1.7E-36 245.6 27.8 258 19-335 56-323 (324)
80 cd08245 CAD Cinnamyl alcohol d 100.0 1.1E-31 2.5E-36 245.3 28.4 278 19-335 51-330 (330)
81 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.8E-31 4E-36 243.8 29.3 279 19-336 52-332 (332)
82 cd08294 leukotriene_B4_DH_like 100.0 1.4E-31 3E-36 244.6 26.3 255 20-337 58-329 (329)
83 cd08295 double_bond_reductase_ 100.0 1.7E-31 3.7E-36 245.0 25.7 259 20-337 66-338 (338)
84 cd08298 CAD2 Cinnamyl alcohol 100.0 4.1E-31 8.9E-36 241.5 27.6 272 19-335 56-329 (329)
85 cd08258 Zn_ADH4 Alcohol dehydr 100.0 9E-31 2E-35 236.8 26.5 249 20-301 54-306 (306)
86 cd08244 MDR_enoyl_red Possible 100.0 4.8E-30 1E-34 233.8 28.8 263 18-337 56-324 (324)
87 cd05282 ETR_like 2-enoyl thioe 100.0 5.4E-30 1.2E-34 233.3 26.9 260 19-336 54-323 (323)
88 cd08276 MDR7 Medium chain dehy 100.0 2.3E-29 4.9E-34 230.3 30.4 278 20-336 56-335 (336)
89 PTZ00354 alcohol dehydrogenase 100.0 1.1E-29 2.3E-34 232.4 27.2 263 19-338 56-329 (334)
90 cd08269 Zn_ADH9 Alcohol dehydr 100.0 2.3E-29 5E-34 228.0 29.2 258 20-335 50-311 (312)
91 cd08290 ETR 2-enoyl thioester 100.0 1.3E-29 2.7E-34 232.8 26.0 260 21-337 63-341 (341)
92 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.9E-29 4E-34 231.2 26.7 259 19-336 56-334 (336)
93 cd05188 MDR Medium chain reduc 100.0 1.5E-29 3.3E-34 224.2 24.9 244 18-297 26-270 (271)
94 COG2130 Putative NADP-dependen 100.0 2.9E-29 6.3E-34 214.0 24.7 259 21-339 67-340 (340)
95 KOG1198 Zinc-binding oxidoredu 100.0 5.7E-30 1.2E-34 231.9 19.1 227 105-339 104-347 (347)
96 PRK10754 quinone oxidoreductas 100.0 3.2E-29 6.9E-34 228.8 23.6 263 19-336 55-326 (327)
97 cd08270 MDR4 Medium chain dehy 100.0 1.5E-28 3.3E-33 222.1 24.5 250 21-337 51-305 (305)
98 cd08243 quinone_oxidoreductase 100.0 2.3E-28 5.1E-33 222.0 25.6 261 19-335 54-319 (320)
99 cd08255 2-desacetyl-2-hydroxye 100.0 2.7E-28 5.8E-33 217.5 25.4 247 19-335 18-277 (277)
100 cd08289 MDR_yhfp_like Yhfp put 100.0 7.9E-28 1.7E-32 219.5 27.7 263 20-337 56-326 (326)
101 cd08250 Mgc45594_like Mgc45594 100.0 4.3E-28 9.3E-33 221.5 25.8 258 19-335 58-328 (329)
102 cd05286 QOR2 Quinone oxidoredu 100.0 1.2E-27 2.6E-32 216.7 28.1 260 20-337 53-320 (320)
103 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 8.9E-28 1.9E-32 218.9 26.9 261 20-337 56-325 (325)
104 cd08249 enoyl_reductase_like e 100.0 8.4E-28 1.8E-32 220.6 26.6 261 20-337 53-339 (339)
105 TIGR02823 oxido_YhdH putative 100.0 3.3E-27 7.2E-32 215.1 28.5 261 19-336 54-322 (323)
106 cd08251 polyketide_synthase po 100.0 3.7E-27 8.1E-32 212.2 27.2 260 19-335 35-303 (303)
107 cd08252 AL_MDR Arginate lyase 100.0 4.4E-27 9.5E-32 215.4 27.4 261 20-336 58-336 (336)
108 cd05276 p53_inducible_oxidored 100.0 7.3E-27 1.6E-31 211.9 26.8 259 19-335 55-323 (323)
109 smart00829 PKS_ER Enoylreducta 100.0 4E-27 8.8E-32 210.1 24.1 255 21-334 23-287 (288)
110 cd05288 PGDH Prostaglandin deh 100.0 5.6E-27 1.2E-31 214.1 24.7 253 21-335 64-329 (329)
111 cd08253 zeta_crystallin Zeta-c 100.0 1.7E-26 3.6E-31 209.8 27.6 265 19-337 55-325 (325)
112 TIGR02824 quinone_pig3 putativ 100.0 1E-26 2.2E-31 211.4 25.7 260 20-337 56-325 (325)
113 cd08268 MDR2 Medium chain dehy 100.0 2.4E-26 5.3E-31 209.1 27.2 264 20-336 56-327 (328)
114 cd05195 enoyl_red enoyl reduct 100.0 1.2E-26 2.7E-31 207.2 23.5 257 20-335 26-293 (293)
115 KOG1202 Animal-type fatty acid 100.0 8.8E-28 1.9E-32 232.4 15.2 271 2-338 1460-1742(2376)
116 cd08248 RTN4I1 Human Reticulon 100.0 1.9E-26 4.2E-31 212.4 23.3 259 19-336 71-350 (350)
117 cd08272 MDR6 Medium chain dehy 100.0 5.2E-26 1.1E-30 206.9 25.5 259 19-337 55-326 (326)
118 cd08288 MDR_yhdh Yhdh putative 99.9 1.6E-25 3.5E-30 204.0 27.7 261 20-337 56-324 (324)
119 cd08247 AST1_like AST1 is a cy 99.9 1.5E-25 3.2E-30 206.8 26.4 264 21-337 58-352 (352)
120 cd08271 MDR5 Medium chain dehy 99.9 9.7E-26 2.1E-30 205.2 24.4 257 21-337 56-325 (325)
121 cd08241 QOR1 Quinone oxidoredu 99.9 3E-25 6.5E-30 201.4 27.1 258 20-335 56-322 (323)
122 cd08273 MDR8 Medium chain dehy 99.9 6.6E-26 1.4E-30 207.1 22.6 255 20-335 56-330 (331)
123 cd08275 MDR3 Medium chain dehy 99.9 6.1E-25 1.3E-29 201.0 27.5 261 19-337 54-337 (337)
124 cd05289 MDR_like_2 alcohol deh 99.9 3.6E-25 7.8E-30 199.7 23.6 250 18-334 56-308 (309)
125 cd08267 MDR1 Medium chain dehy 99.9 5.9E-25 1.3E-29 199.5 23.9 255 20-334 57-318 (319)
126 KOG1196 Predicted NAD-dependen 99.9 1.2E-23 2.6E-28 179.1 22.1 250 28-338 78-341 (343)
127 PF00107 ADH_zinc_N: Zinc-bind 99.8 8.4E-18 1.8E-22 132.5 13.7 128 163-299 1-129 (130)
128 PF08240 ADH_N: Alcohol dehydr 99.7 3.2E-17 6.9E-22 125.0 6.2 84 16-121 26-109 (109)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 1.1E-12 2.4E-17 121.2 17.2 176 141-338 189-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 1.3E-11 2.8E-16 116.9 15.1 155 150-310 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 1.3E-12 2.8E-17 102.3 2.9 120 196-335 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.6 2.2E-07 4.8E-12 82.6 10.0 163 147-325 72-246 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.5 8.5E-07 1.8E-11 84.2 12.0 108 151-260 162-289 (511)
134 TIGR01035 hemA glutamyl-tRNA r 98.4 1.7E-08 3.7E-13 94.9 -2.1 161 23-235 88-252 (417)
135 PRK08306 dipicolinate synthase 98.3 1.1E-05 2.4E-10 72.4 13.2 96 152-260 151-246 (296)
136 PRK05476 S-adenosyl-L-homocyst 98.3 1.7E-05 3.6E-10 74.1 13.3 103 140-258 198-302 (425)
137 PRK00517 prmA ribosomal protei 98.2 3.9E-05 8.4E-10 67.3 14.0 131 106-257 78-215 (250)
138 cd05213 NAD_bind_Glutamyl_tRNA 98.2 6E-06 1.3E-10 74.7 8.0 108 117-236 140-251 (311)
139 PRK00045 hemA glutamyl-tRNA re 98.2 6.4E-08 1.4E-12 91.3 -5.1 161 23-235 90-254 (423)
140 TIGR00936 ahcY adenosylhomocys 98.2 3.4E-05 7.5E-10 71.6 12.7 100 142-257 183-284 (406)
141 PLN02494 adenosylhomocysteinas 98.1 5.2E-05 1.1E-09 71.1 12.0 101 141-257 241-343 (477)
142 TIGR02853 spore_dpaA dipicolin 98.0 4.5E-05 9.9E-10 68.0 10.8 96 152-260 150-245 (287)
143 COG2518 Pcm Protein-L-isoaspar 98.0 4.1E-05 8.8E-10 64.0 9.4 115 129-256 51-170 (209)
144 TIGR00518 alaDH alanine dehydr 97.9 0.0001 2.2E-09 68.3 10.6 100 152-260 166-272 (370)
145 PRK08324 short chain dehydroge 97.8 0.00029 6.2E-09 70.9 12.6 137 106-257 386-559 (681)
146 TIGR00406 prmA ribosomal prote 97.8 0.00025 5.3E-09 63.6 10.6 97 150-257 157-261 (288)
147 PF01488 Shikimate_DH: Shikima 97.7 0.00021 4.5E-09 56.3 8.0 75 151-235 10-87 (135)
148 COG2242 CobL Precorrin-6B meth 97.7 0.00074 1.6E-08 55.3 11.2 104 146-257 28-137 (187)
149 PRK12771 putative glutamate sy 97.7 3.9E-05 8.4E-10 75.4 4.1 80 149-235 133-234 (564)
150 PTZ00075 Adenosylhomocysteinas 97.6 0.0004 8.8E-09 65.4 9.9 91 151-257 252-343 (476)
151 PF11017 DUF2855: Protein of u 97.5 0.0072 1.6E-07 54.0 15.8 138 106-257 90-233 (314)
152 PRK13943 protein-L-isoaspartat 97.4 0.0028 6E-08 57.5 12.4 103 144-254 72-179 (322)
153 PRK11705 cyclopropane fatty ac 97.4 0.0015 3.2E-08 60.9 10.9 110 136-256 151-268 (383)
154 PRK05786 fabG 3-ketoacyl-(acyl 97.4 0.0035 7.6E-08 54.1 12.4 104 152-257 4-137 (238)
155 COG4221 Short-chain alcohol de 97.4 0.0011 2.4E-08 56.5 8.7 78 153-233 6-91 (246)
156 PRK00377 cbiT cobalt-precorrin 97.4 0.0038 8.3E-08 52.6 12.0 102 146-254 34-144 (198)
157 PRK05693 short chain dehydroge 97.3 0.0039 8.5E-08 55.2 11.8 77 154-233 2-82 (274)
158 PF02826 2-Hacid_dh_C: D-isome 97.3 0.0022 4.8E-08 53.1 9.4 90 151-256 34-128 (178)
159 COG4122 Predicted O-methyltran 97.3 0.0045 9.7E-08 52.6 11.2 111 144-258 51-169 (219)
160 PRK13944 protein-L-isoaspartat 97.2 0.0036 7.8E-08 53.1 10.0 101 144-254 64-172 (205)
161 PF01135 PCMT: Protein-L-isoas 97.2 0.00096 2.1E-08 56.6 6.0 107 136-255 58-172 (209)
162 PRK04148 hypothetical protein; 97.1 0.0026 5.5E-08 49.6 7.8 88 149-246 13-100 (134)
163 KOG1209 1-Acyl dihydroxyaceton 97.1 0.0071 1.5E-07 50.4 10.6 79 152-233 6-91 (289)
164 TIGR00438 rrmJ cell division p 97.1 0.0088 1.9E-07 49.9 11.4 99 148-255 28-146 (188)
165 COG1748 LYS9 Saccharopine dehy 97.1 0.006 1.3E-07 56.3 10.9 96 154-257 2-101 (389)
166 PF12847 Methyltransf_18: Meth 97.1 0.0026 5.6E-08 48.0 7.3 94 152-254 1-110 (112)
167 PF13460 NAD_binding_10: NADH( 97.1 0.019 4.1E-07 47.4 13.1 93 156-257 1-99 (183)
168 PF06325 PrmA: Ribosomal prote 97.1 0.0042 9E-08 55.5 9.4 96 150-258 159-262 (295)
169 PRK05993 short chain dehydroge 97.0 0.0055 1.2E-07 54.5 10.2 78 152-232 3-85 (277)
170 TIGR02469 CbiT precorrin-6Y C5 97.0 0.011 2.4E-07 45.2 10.5 102 145-255 12-122 (124)
171 PRK13942 protein-L-isoaspartat 97.0 0.012 2.5E-07 50.3 11.4 101 144-255 68-176 (212)
172 COG3967 DltE Short-chain dehyd 97.0 0.0046 1E-07 51.3 8.2 78 152-233 4-88 (245)
173 COG0300 DltE Short-chain dehyd 96.9 0.0073 1.6E-07 52.8 9.5 79 151-233 4-94 (265)
174 PRK08177 short chain dehydroge 96.9 0.0068 1.5E-07 52.0 9.3 77 154-233 2-81 (225)
175 COG2230 Cfa Cyclopropane fatty 96.9 0.011 2.3E-07 52.2 10.1 108 140-261 60-182 (283)
176 PRK14967 putative methyltransf 96.8 0.088 1.9E-06 45.2 15.6 98 146-255 30-159 (223)
177 PRK12742 oxidoreductase; Provi 96.8 0.037 8.1E-07 47.6 13.3 101 152-258 5-134 (237)
178 PRK00107 gidB 16S rRNA methylt 96.8 0.015 3.2E-07 48.5 10.1 97 150-255 43-145 (187)
179 COG2226 UbiE Methylase involve 96.8 0.024 5.1E-07 48.9 11.5 109 144-260 43-161 (238)
180 PRK00536 speE spermidine synth 96.8 0.0063 1.4E-07 53.3 8.0 100 151-257 71-173 (262)
181 KOG1205 Predicted dehydrogenas 96.8 0.034 7.3E-07 49.1 12.4 109 152-263 11-157 (282)
182 PRK13940 glutamyl-tRNA reducta 96.7 0.0093 2E-07 56.1 9.4 76 151-236 179-255 (414)
183 PLN03209 translocon at the inn 96.7 0.033 7.2E-07 54.1 13.3 105 146-258 73-210 (576)
184 cd01080 NAD_bind_m-THF_DH_Cycl 96.7 0.018 4E-07 47.0 10.0 97 130-257 21-118 (168)
185 PRK08017 oxidoreductase; Provi 96.7 0.0067 1.5E-07 53.0 8.0 77 154-233 3-84 (256)
186 PRK06139 short chain dehydroge 96.7 0.01 2.2E-07 54.3 9.2 79 152-233 6-94 (330)
187 PRK07326 short chain dehydroge 96.7 0.032 6.9E-07 48.1 12.0 79 152-233 5-92 (237)
188 PRK00811 spermidine synthase; 96.7 0.013 2.9E-07 52.2 9.7 98 151-255 75-191 (283)
189 PF00670 AdoHcyase_NAD: S-aden 96.7 0.025 5.4E-07 45.6 10.1 97 144-256 13-111 (162)
190 PLN02476 O-methyltransferase 96.7 0.017 3.6E-07 51.1 10.0 107 144-255 110-228 (278)
191 PRK06182 short chain dehydroge 96.7 0.011 2.4E-07 52.3 9.1 78 153-233 3-84 (273)
192 TIGR00080 pimt protein-L-isoas 96.7 0.0053 1.2E-07 52.5 6.7 101 144-254 69-176 (215)
193 PRK07231 fabG 3-ketoacyl-(acyl 96.7 0.018 3.9E-07 50.0 10.3 79 152-233 4-91 (251)
194 PLN02781 Probable caffeoyl-CoA 96.7 0.019 4.1E-07 49.7 10.1 107 144-255 60-178 (234)
195 COG2264 PrmA Ribosomal protein 96.6 0.015 3.2E-07 51.8 9.4 128 116-257 130-265 (300)
196 PRK08265 short chain dehydroge 96.6 0.033 7.1E-07 49.0 11.8 79 152-233 5-90 (261)
197 PLN02366 spermidine synthase 96.6 0.017 3.6E-07 52.1 9.9 101 151-256 90-207 (308)
198 PRK12939 short chain dehydroge 96.6 0.044 9.6E-07 47.5 12.5 79 152-233 6-94 (250)
199 PF03446 NAD_binding_2: NAD bi 96.6 0.045 9.9E-07 44.5 11.6 88 155-257 3-96 (163)
200 COG2519 GCD14 tRNA(1-methylade 96.6 0.02 4.4E-07 49.2 9.7 104 144-256 86-196 (256)
201 PRK06949 short chain dehydroge 96.6 0.014 3.1E-07 51.0 9.2 79 152-233 8-96 (258)
202 PF02353 CMAS: Mycolic acid cy 96.6 0.0052 1.1E-07 54.4 6.4 100 144-257 54-168 (273)
203 PRK07109 short chain dehydroge 96.6 0.068 1.5E-06 49.0 14.0 79 152-233 7-95 (334)
204 PRK07806 short chain dehydroge 96.6 0.041 8.9E-07 47.8 12.0 101 152-256 5-135 (248)
205 PRK03369 murD UDP-N-acetylmura 96.6 0.012 2.7E-07 56.8 9.4 73 150-234 9-81 (488)
206 PF13241 NAD_binding_7: Putati 96.6 0.027 5.9E-07 42.0 9.3 89 152-258 6-94 (103)
207 PRK07060 short chain dehydroge 96.6 0.021 4.5E-07 49.5 10.0 77 152-233 8-87 (245)
208 PF01596 Methyltransf_3: O-met 96.6 0.0061 1.3E-07 51.6 6.2 103 147-255 40-155 (205)
209 COG0686 Ald Alanine dehydrogen 96.6 0.015 3.3E-07 51.3 8.6 99 153-259 168-272 (371)
210 PRK07402 precorrin-6B methylas 96.5 0.066 1.4E-06 44.9 12.5 104 144-256 32-143 (196)
211 PF01262 AlaDh_PNT_C: Alanine 96.5 0.0098 2.1E-07 48.7 7.2 105 152-259 19-143 (168)
212 PRK06057 short chain dehydroge 96.5 0.016 3.4E-07 50.7 8.9 79 152-233 6-89 (255)
213 PRK07502 cyclohexadienyl dehyd 96.5 0.025 5.3E-07 51.2 10.4 91 154-256 7-101 (307)
214 TIGR02356 adenyl_thiF thiazole 96.5 0.037 7.9E-07 46.8 10.6 35 152-186 20-54 (202)
215 PRK08267 short chain dehydroge 96.5 0.053 1.1E-06 47.5 12.0 77 154-233 2-87 (260)
216 PRK12829 short chain dehydroge 96.4 0.017 3.7E-07 50.7 8.7 83 149-234 7-97 (264)
217 PRK12549 shikimate 5-dehydroge 96.4 0.033 7.2E-07 49.7 10.5 43 152-194 126-168 (284)
218 PRK11207 tellurite resistance 96.4 0.015 3.3E-07 48.9 7.9 101 145-256 23-135 (197)
219 PRK01581 speE spermidine synth 96.4 0.064 1.4E-06 49.1 12.1 100 150-256 148-269 (374)
220 cd01075 NAD_bind_Leu_Phe_Val_D 96.4 0.084 1.8E-06 44.5 12.2 81 152-246 27-108 (200)
221 PRK05872 short chain dehydroge 96.4 0.022 4.7E-07 51.2 9.1 79 152-233 8-95 (296)
222 PRK12828 short chain dehydroge 96.4 0.057 1.2E-06 46.4 11.4 79 152-233 6-92 (239)
223 PF03807 F420_oxidored: NADP o 96.4 0.17 3.8E-06 36.8 12.4 85 155-254 1-93 (96)
224 PRK04457 spermidine synthase; 96.3 0.057 1.2E-06 47.6 11.3 95 151-254 65-176 (262)
225 PLN02589 caffeoyl-CoA O-methyl 96.3 0.041 8.9E-07 47.9 10.2 103 145-253 72-188 (247)
226 PRK06953 short chain dehydroge 96.3 0.033 7.1E-07 47.6 9.6 77 154-233 2-80 (222)
227 cd05311 NAD_bind_2_malic_enz N 96.3 0.072 1.6E-06 45.9 11.5 92 151-255 23-128 (226)
228 PRK06841 short chain dehydroge 96.3 0.023 4.9E-07 49.6 8.6 79 152-233 14-99 (255)
229 PRK08261 fabG 3-ketoacyl-(acyl 96.3 0.061 1.3E-06 51.4 12.2 78 152-233 209-294 (450)
230 PF08704 GCD14: tRNA methyltra 96.3 0.011 2.4E-07 51.3 6.4 106 144-256 32-147 (247)
231 PRK05866 short chain dehydroge 96.3 0.031 6.6E-07 50.2 9.5 78 153-233 40-127 (293)
232 PRK07825 short chain dehydroge 96.3 0.028 6.2E-07 49.6 9.3 78 153-233 5-88 (273)
233 PRK07831 short chain dehydroge 96.3 0.037 8E-07 48.6 9.9 81 150-233 14-107 (262)
234 PF03435 Saccharop_dh: Sacchar 96.3 0.049 1.1E-06 51.0 11.2 91 156-254 1-97 (386)
235 PRK09186 flagellin modificatio 96.3 0.074 1.6E-06 46.3 11.7 78 152-232 3-92 (256)
236 PRK06200 2,3-dihydroxy-2,3-dih 96.3 0.029 6.3E-07 49.3 9.1 79 152-233 5-90 (263)
237 PRK07832 short chain dehydroge 96.3 0.076 1.6E-06 46.9 11.9 76 155-233 2-88 (272)
238 cd01065 NAD_bind_Shikimate_DH 96.2 0.028 6E-07 45.1 8.2 96 151-257 17-118 (155)
239 PRK07814 short chain dehydroge 96.2 0.031 6.8E-07 49.1 9.1 78 152-233 9-97 (263)
240 PRK09291 short chain dehydroge 96.2 0.038 8.2E-07 48.2 9.6 73 153-232 2-82 (257)
241 PRK06719 precorrin-2 dehydroge 96.2 0.049 1.1E-06 44.0 9.4 88 152-254 12-99 (157)
242 PRK06718 precorrin-2 dehydroge 96.2 0.022 4.7E-07 48.2 7.5 92 152-256 9-101 (202)
243 TIGR01470 cysG_Nterm siroheme 96.2 0.039 8.5E-07 46.7 9.1 93 152-256 8-101 (205)
244 PF00106 adh_short: short chai 96.2 0.15 3.2E-06 41.2 12.3 80 154-233 1-90 (167)
245 PRK08217 fabG 3-ketoacyl-(acyl 96.2 0.05 1.1E-06 47.2 10.1 78 152-232 4-91 (253)
246 PRK14027 quinate/shikimate deh 96.2 0.058 1.3E-06 48.1 10.5 43 152-194 126-168 (283)
247 TIGR03325 BphB_TodD cis-2,3-di 96.2 0.034 7.4E-07 48.8 9.0 78 152-232 4-88 (262)
248 CHL00194 ycf39 Ycf39; Provisio 96.2 0.093 2E-06 47.6 12.1 94 155-257 2-111 (317)
249 PRK05867 short chain dehydroge 96.2 0.035 7.6E-07 48.5 9.0 79 152-233 8-96 (253)
250 PRK06180 short chain dehydroge 96.1 0.03 6.5E-07 49.7 8.6 78 153-233 4-88 (277)
251 COG0334 GdhA Glutamate dehydro 96.1 0.073 1.6E-06 49.2 11.0 60 126-188 181-241 (411)
252 PRK00258 aroE shikimate 5-dehy 96.1 0.02 4.4E-07 51.0 7.4 96 151-256 121-222 (278)
253 COG0169 AroE Shikimate 5-dehyd 96.1 0.025 5.3E-07 50.2 7.8 44 152-195 125-168 (283)
254 PRK07904 short chain dehydroge 96.1 0.053 1.1E-06 47.5 10.0 81 150-233 5-97 (253)
255 COG0373 HemA Glutamyl-tRNA red 96.1 0.047 1E-06 50.8 9.8 95 152-257 177-276 (414)
256 PRK07677 short chain dehydroge 96.1 0.036 7.8E-07 48.3 8.7 78 153-233 1-88 (252)
257 PRK06196 oxidoreductase; Provi 96.1 0.043 9.4E-07 49.7 9.5 79 152-233 25-109 (315)
258 TIGR01832 kduD 2-deoxy-D-gluco 96.1 0.052 1.1E-06 47.1 9.7 79 152-233 4-90 (248)
259 PRK10258 biotin biosynthesis p 96.1 0.31 6.7E-06 42.6 14.6 101 144-256 34-141 (251)
260 PRK08339 short chain dehydroge 96.1 0.053 1.1E-06 47.8 9.7 79 152-233 7-95 (263)
261 PRK07478 short chain dehydroge 96.0 0.046 1E-06 47.7 9.2 79 152-233 5-93 (254)
262 COG2227 UbiG 2-polyprenyl-3-me 96.0 0.067 1.4E-06 45.7 9.6 95 151-254 58-160 (243)
263 PRK07574 formate dehydrogenase 96.0 0.072 1.6E-06 49.6 10.7 89 152-255 191-284 (385)
264 PRK06484 short chain dehydroge 96.0 0.11 2.4E-06 50.6 12.7 102 152-257 268-402 (520)
265 PRK06505 enoyl-(acyl carrier p 96.0 0.043 9.4E-07 48.6 9.0 78 152-232 6-94 (271)
266 PRK15116 sulfur acceptor prote 96.0 0.23 4.9E-06 43.8 13.2 103 152-257 29-155 (268)
267 PF01209 Ubie_methyltran: ubiE 96.0 0.038 8.2E-07 47.8 8.3 120 144-273 39-171 (233)
268 TIGR01809 Shik-DH-AROM shikima 96.0 0.031 6.7E-07 49.9 7.9 76 152-234 124-201 (282)
269 PLN02823 spermine synthase 96.0 0.079 1.7E-06 48.4 10.6 101 152-255 103-220 (336)
270 PRK07062 short chain dehydroge 96.0 0.046 1E-06 48.0 8.9 79 152-233 7-97 (265)
271 PRK05717 oxidoreductase; Valid 96.0 0.053 1.2E-06 47.4 9.2 79 152-233 9-94 (255)
272 PRK01683 trans-aconitate 2-met 96.0 0.11 2.3E-06 45.6 11.2 100 144-255 23-130 (258)
273 PRK13394 3-hydroxybutyrate deh 95.9 0.071 1.5E-06 46.6 10.0 79 152-233 6-94 (262)
274 PRK08618 ornithine cyclodeamin 95.9 0.14 3E-06 46.7 12.1 94 151-258 125-224 (325)
275 PRK14103 trans-aconitate 2-met 95.9 0.11 2.3E-06 45.7 11.0 97 144-254 21-125 (255)
276 PRK06500 short chain dehydroge 95.9 0.056 1.2E-06 46.8 9.3 79 152-233 5-90 (249)
277 PRK06128 oxidoreductase; Provi 95.9 0.14 3E-06 46.0 11.9 102 152-257 54-193 (300)
278 PLN03075 nicotianamine synthas 95.9 0.071 1.5E-06 47.5 9.6 98 152-255 123-233 (296)
279 PLN02780 ketoreductase/ oxidor 95.9 0.05 1.1E-06 49.5 9.0 80 152-233 52-142 (320)
280 cd01483 E1_enzyme_family Super 95.9 0.12 2.6E-06 40.9 10.2 32 155-186 1-32 (143)
281 PRK08340 glucose-1-dehydrogena 95.9 0.06 1.3E-06 47.2 9.3 76 155-233 2-86 (259)
282 PLN03139 formate dehydrogenase 95.9 0.092 2E-06 48.9 10.7 89 152-255 198-291 (386)
283 PLN02244 tocopherol O-methyltr 95.9 0.056 1.2E-06 49.6 9.3 95 151-256 117-224 (340)
284 COG0421 SpeE Spermidine syntha 95.9 0.093 2E-06 46.6 10.3 99 154-255 78-190 (282)
285 TIGR01318 gltD_gamma_fam gluta 95.9 0.049 1.1E-06 52.3 9.3 78 152-235 140-238 (467)
286 PLN00203 glutamyl-tRNA reducta 95.9 0.048 1E-06 52.8 9.2 73 153-235 266-341 (519)
287 PRK07576 short chain dehydroge 95.9 0.064 1.4E-06 47.2 9.3 78 152-232 8-95 (264)
288 PRK12809 putative oxidoreducta 95.8 0.053 1.2E-06 54.2 9.7 77 152-234 309-406 (639)
289 PRK08643 acetoin reductase; Va 95.8 0.063 1.4E-06 46.9 9.1 78 153-233 2-89 (256)
290 PRK09072 short chain dehydroge 95.8 0.078 1.7E-06 46.5 9.8 79 152-233 4-90 (263)
291 PRK07523 gluconate 5-dehydroge 95.8 0.067 1.5E-06 46.7 9.2 79 152-233 9-97 (255)
292 PRK06198 short chain dehydroge 95.8 0.071 1.5E-06 46.6 9.4 80 152-233 5-94 (260)
293 PRK05875 short chain dehydroge 95.8 0.067 1.5E-06 47.3 9.3 77 153-232 7-95 (276)
294 PRK08317 hypothetical protein; 95.8 0.13 2.8E-06 44.2 10.8 102 144-255 11-124 (241)
295 PRK07533 enoyl-(acyl carrier p 95.8 0.065 1.4E-06 47.0 9.1 78 152-232 9-97 (258)
296 PRK08213 gluconate 5-dehydroge 95.8 0.073 1.6E-06 46.6 9.4 79 152-233 11-99 (259)
297 TIGR00477 tehB tellurite resis 95.8 0.05 1.1E-06 45.7 7.9 100 144-255 22-133 (195)
298 PRK05653 fabG 3-ketoacyl-(acyl 95.8 0.071 1.5E-06 45.9 9.2 78 153-233 5-92 (246)
299 PRK11036 putative S-adenosyl-L 95.8 0.084 1.8E-06 46.3 9.6 94 151-255 43-149 (255)
300 PRK07454 short chain dehydroge 95.8 0.089 1.9E-06 45.4 9.7 79 152-233 5-93 (241)
301 PRK05884 short chain dehydroge 95.8 0.077 1.7E-06 45.5 9.2 74 155-232 2-78 (223)
302 PRK06138 short chain dehydroge 95.7 0.072 1.6E-06 46.3 9.2 79 152-233 4-91 (252)
303 PRK00312 pcm protein-L-isoaspa 95.7 0.044 9.4E-07 46.7 7.6 100 144-256 70-176 (212)
304 PRK08594 enoyl-(acyl carrier p 95.7 0.17 3.7E-06 44.3 11.5 78 152-232 6-96 (257)
305 PF02558 ApbA: Ketopantoate re 95.7 0.029 6.3E-07 44.8 6.1 90 156-255 1-101 (151)
306 PRK07890 short chain dehydroge 95.7 0.072 1.6E-06 46.5 9.1 79 152-233 4-92 (258)
307 PRK08628 short chain dehydroge 95.7 0.07 1.5E-06 46.6 9.0 79 152-233 6-93 (258)
308 PRK08261 fabG 3-ketoacyl-(acyl 95.7 0.035 7.7E-07 53.0 7.5 92 147-257 28-125 (450)
309 PRK07063 short chain dehydroge 95.7 0.075 1.6E-06 46.5 9.1 79 152-233 6-96 (260)
310 COG0031 CysK Cysteine synthase 95.7 0.41 8.9E-06 42.7 13.5 60 146-206 55-117 (300)
311 TIGR02355 moeB molybdopterin s 95.7 0.098 2.1E-06 45.5 9.5 35 153-187 24-58 (240)
312 PRK05854 short chain dehydroge 95.7 0.087 1.9E-06 47.8 9.6 79 152-233 13-103 (313)
313 cd00755 YgdL_like Family of ac 95.7 0.27 5.9E-06 42.4 12.1 99 153-255 11-134 (231)
314 PRK06172 short chain dehydroge 95.7 0.081 1.7E-06 46.1 9.1 79 152-233 6-94 (253)
315 PRK06181 short chain dehydroge 95.6 0.091 2E-06 46.1 9.5 77 154-233 2-88 (263)
316 PRK07417 arogenate dehydrogena 95.6 0.083 1.8E-06 47.1 9.2 68 155-235 2-69 (279)
317 PRK08703 short chain dehydroge 95.6 0.053 1.2E-06 46.8 7.9 81 152-233 5-97 (239)
318 PRK07774 short chain dehydroge 95.6 0.091 2E-06 45.6 9.3 79 152-233 5-93 (250)
319 PRK07035 short chain dehydroge 95.6 0.086 1.9E-06 45.9 9.2 77 153-232 8-94 (252)
320 PRK12475 thiamine/molybdopteri 95.6 0.12 2.7E-06 47.3 10.4 35 153-187 24-58 (338)
321 cd01078 NAD_bind_H4MPT_DH NADP 95.6 0.11 2.5E-06 43.4 9.6 76 152-235 27-109 (194)
322 PRK06483 dihydromonapterin red 95.6 0.11 2.4E-06 44.8 9.7 78 153-233 2-84 (236)
323 PLN02233 ubiquinone biosynthes 95.6 0.22 4.7E-06 43.9 11.7 102 146-257 67-184 (261)
324 PRK07024 short chain dehydroge 95.6 0.096 2.1E-06 45.8 9.5 78 153-233 2-88 (257)
325 PRK06603 enoyl-(acyl carrier p 95.6 0.083 1.8E-06 46.4 9.0 78 152-232 7-95 (260)
326 PRK06194 hypothetical protein; 95.6 0.09 1.9E-06 46.8 9.4 78 153-233 6-93 (287)
327 PRK08644 thiamine biosynthesis 95.6 0.13 2.8E-06 43.8 9.8 35 152-186 27-61 (212)
328 TIGR03206 benzo_BadH 2-hydroxy 95.6 0.091 2E-06 45.6 9.2 79 153-232 3-89 (250)
329 PRK12937 short chain dehydroge 95.6 0.25 5.5E-06 42.6 12.0 102 152-257 4-141 (245)
330 PRK06482 short chain dehydroge 95.6 0.088 1.9E-06 46.6 9.2 77 154-233 3-86 (276)
331 PRK07688 thiamine/molybdopteri 95.6 0.12 2.6E-06 47.4 10.2 34 153-186 24-57 (339)
332 PRK08287 cobalt-precorrin-6Y C 95.6 0.28 6E-06 40.8 11.7 100 144-255 23-131 (187)
333 PRK06101 short chain dehydroge 95.6 0.11 2.3E-06 45.0 9.6 75 154-232 2-80 (240)
334 PF02254 TrkA_N: TrkA-N domain 95.6 0.3 6.6E-06 36.9 11.0 74 156-235 1-74 (116)
335 TIGR03840 TMPT_Se_Te thiopurin 95.6 0.21 4.6E-06 42.5 11.1 103 151-257 33-154 (213)
336 PRK06197 short chain dehydroge 95.6 0.092 2E-06 47.3 9.4 79 152-233 15-105 (306)
337 PRK08690 enoyl-(acyl carrier p 95.6 0.087 1.9E-06 46.3 9.1 79 152-233 5-94 (261)
338 PRK12548 shikimate 5-dehydroge 95.6 0.12 2.5E-06 46.4 9.9 36 152-187 125-160 (289)
339 PRK09242 tropinone reductase; 95.6 0.1 2.2E-06 45.5 9.5 79 152-233 8-98 (257)
340 COG0569 TrkA K+ transport syst 95.6 0.15 3.3E-06 43.8 10.2 84 155-245 2-87 (225)
341 PRK08862 short chain dehydroge 95.6 0.1 2.2E-06 44.9 9.2 78 152-232 4-92 (227)
342 PRK12367 short chain dehydroge 95.5 0.12 2.6E-06 45.0 9.7 73 153-233 14-89 (245)
343 PRK05690 molybdopterin biosynt 95.5 0.14 2.9E-06 44.8 9.9 35 152-186 31-65 (245)
344 PRK06914 short chain dehydroge 95.5 0.091 2E-06 46.6 9.1 77 153-233 3-91 (280)
345 PRK04266 fibrillarin; Provisio 95.5 0.17 3.8E-06 43.5 10.5 102 146-254 66-175 (226)
346 PRK08589 short chain dehydroge 95.5 0.089 1.9E-06 46.5 9.0 79 152-233 5-92 (272)
347 PRK08251 short chain dehydroge 95.5 0.11 2.4E-06 45.0 9.6 77 153-232 2-90 (248)
348 PF07021 MetW: Methionine bios 95.5 0.16 3.4E-06 42.1 9.6 70 150-228 11-80 (193)
349 TIGR01505 tartro_sem_red 2-hyd 95.5 0.16 3.4E-06 45.6 10.6 71 155-239 1-71 (291)
350 PRK14175 bifunctional 5,10-met 95.5 0.16 3.5E-06 45.1 10.3 95 131-257 136-232 (286)
351 PRK12823 benD 1,6-dihydroxycyc 95.5 0.082 1.8E-06 46.3 8.6 78 152-232 7-93 (260)
352 TIGR00138 gidB 16S rRNA methyl 95.5 0.1 2.3E-06 43.2 8.7 94 152-254 42-141 (181)
353 PRK13243 glyoxylate reductase; 95.5 0.18 3.9E-06 46.1 11.0 87 152-255 149-240 (333)
354 PRK12769 putative oxidoreducta 95.5 0.079 1.7E-06 53.2 9.4 76 152-233 326-422 (654)
355 PTZ00098 phosphoethanolamine N 95.5 0.093 2E-06 46.3 8.8 106 144-257 44-158 (263)
356 PRK08277 D-mannonate oxidoredu 95.5 0.11 2.3E-06 46.1 9.3 78 152-232 9-96 (278)
357 PRK12481 2-deoxy-D-gluconate 3 95.5 0.15 3.3E-06 44.4 10.2 79 152-233 7-93 (251)
358 TIGR00507 aroE shikimate 5-deh 95.5 0.1 2.2E-06 46.3 9.0 93 151-257 115-216 (270)
359 PRK12384 sorbitol-6-phosphate 95.4 0.098 2.1E-06 45.7 8.9 78 153-233 2-91 (259)
360 PRK00121 trmB tRNA (guanine-N( 95.4 0.34 7.3E-06 40.9 11.7 98 152-255 40-156 (202)
361 PRK08415 enoyl-(acyl carrier p 95.4 0.12 2.5E-06 45.9 9.4 102 152-257 4-145 (274)
362 PRK08264 short chain dehydroge 95.4 0.092 2E-06 45.2 8.5 75 152-233 5-83 (238)
363 PRK06179 short chain dehydroge 95.4 0.049 1.1E-06 48.0 6.9 76 153-233 4-83 (270)
364 PRK08263 short chain dehydroge 95.4 0.12 2.5E-06 45.8 9.4 78 153-233 3-87 (275)
365 PRK06125 short chain dehydroge 95.4 0.11 2.4E-06 45.4 9.1 77 152-233 6-91 (259)
366 PRK06079 enoyl-(acyl carrier p 95.4 0.11 2.4E-06 45.3 9.1 78 152-232 6-92 (252)
367 PRK08085 gluconate 5-dehydroge 95.4 0.14 3.1E-06 44.5 9.7 79 152-233 8-96 (254)
368 PLN02253 xanthoxin dehydrogena 95.4 0.1 2.2E-06 46.2 8.9 79 152-233 17-104 (280)
369 PRK07067 sorbitol dehydrogenas 95.4 0.13 2.9E-06 44.8 9.5 78 153-233 6-90 (257)
370 PRK07453 protochlorophyllide o 95.4 0.12 2.5E-06 47.1 9.4 78 152-232 5-92 (322)
371 PRK05876 short chain dehydroge 95.4 0.19 4.1E-06 44.6 10.5 79 152-233 5-93 (275)
372 PRK14618 NAD(P)H-dependent gly 95.3 0.21 4.5E-06 45.6 11.0 89 155-256 6-105 (328)
373 PRK12826 3-ketoacyl-(acyl-carr 95.3 0.13 2.9E-06 44.4 9.4 79 152-233 5-93 (251)
374 PRK07577 short chain dehydroge 95.3 0.077 1.7E-06 45.5 7.8 73 153-233 3-78 (234)
375 cd00757 ThiF_MoeB_HesA_family 95.3 0.22 4.7E-06 42.9 10.4 34 153-186 21-54 (228)
376 PRK07984 enoyl-(acyl carrier p 95.3 0.13 2.9E-06 45.2 9.3 78 152-232 5-93 (262)
377 KOG1201 Hydroxysteroid 17-beta 95.3 0.073 1.6E-06 47.0 7.3 78 152-233 37-124 (300)
378 PRK07856 short chain dehydroge 95.3 0.1 2.2E-06 45.5 8.5 75 152-233 5-85 (252)
379 PRK08159 enoyl-(acyl carrier p 95.3 0.12 2.7E-06 45.7 9.1 78 152-232 9-97 (272)
380 PRK08226 short chain dehydroge 95.3 0.13 2.9E-06 45.0 9.2 79 152-233 5-92 (263)
381 PRK12429 3-hydroxybutyrate deh 95.3 0.13 2.9E-06 44.7 9.2 78 153-233 4-91 (258)
382 PRK11559 garR tartronate semia 95.3 0.24 5.1E-06 44.5 11.0 71 155-239 4-74 (296)
383 PRK07985 oxidoreductase; Provi 95.3 0.31 6.7E-06 43.7 11.7 102 152-257 48-187 (294)
384 PRK06849 hypothetical protein; 95.3 1 2.2E-05 42.2 15.5 93 152-246 3-99 (389)
385 COG2910 Putative NADH-flavin r 95.3 0.18 3.9E-06 41.3 8.9 94 155-257 2-106 (211)
386 PRK06701 short chain dehydroge 95.2 0.42 9.1E-06 42.7 12.5 79 152-233 45-134 (290)
387 PRK08762 molybdopterin biosynt 95.2 0.3 6.4E-06 45.6 11.8 35 152-186 134-168 (376)
388 PRK15469 ghrA bifunctional gly 95.2 0.15 3.2E-06 46.2 9.4 88 152-256 135-227 (312)
389 COG4106 Tam Trans-aconitate me 95.2 0.15 3.2E-06 42.9 8.4 98 145-253 23-127 (257)
390 PF02670 DXP_reductoisom: 1-de 95.2 0.33 7.2E-06 37.6 9.9 87 156-247 1-114 (129)
391 PRK07074 short chain dehydroge 95.2 0.15 3.1E-06 44.6 9.2 78 153-233 2-87 (257)
392 PRK07666 fabG 3-ketoacyl-(acyl 95.2 0.18 3.9E-06 43.4 9.6 80 153-233 7-94 (239)
393 PRK08328 hypothetical protein; 95.2 0.16 3.5E-06 43.9 9.2 34 153-186 27-60 (231)
394 PF10727 Rossmann-like: Rossma 95.2 0.11 2.3E-06 40.3 7.2 79 153-246 10-90 (127)
395 PRK06077 fabG 3-ketoacyl-(acyl 95.2 0.53 1.1E-05 40.7 12.6 102 153-258 6-143 (252)
396 PRK10538 malonic semialdehyde 95.2 0.15 3.2E-06 44.3 9.1 76 155-233 2-84 (248)
397 KOG4022 Dihydropteridine reduc 95.1 0.25 5.3E-06 39.6 9.1 97 153-256 3-130 (236)
398 PRK06114 short chain dehydroge 95.1 0.17 3.7E-06 44.2 9.4 79 152-233 7-96 (254)
399 PLN00141 Tic62-NAD(P)-related 95.1 0.17 3.7E-06 44.1 9.4 100 152-257 16-133 (251)
400 PRK08993 2-deoxy-D-gluconate 3 95.1 0.16 3.5E-06 44.2 9.3 79 152-233 9-95 (253)
401 cd05313 NAD_bind_2_Glu_DH NAD( 95.1 0.27 5.8E-06 42.9 10.2 34 151-185 36-69 (254)
402 PRK06484 short chain dehydroge 95.1 0.12 2.5E-06 50.4 9.0 79 152-233 4-89 (520)
403 PF00899 ThiF: ThiF family; I 95.1 0.17 3.6E-06 39.7 8.3 96 153-254 2-122 (135)
404 TIGR02354 thiF_fam2 thiamine b 95.1 0.3 6.5E-06 41.2 10.2 35 152-186 20-54 (200)
405 PF01210 NAD_Gly3P_dh_N: NAD-d 95.1 0.25 5.4E-06 39.9 9.5 80 155-246 1-91 (157)
406 PRK06124 gluconate 5-dehydroge 95.1 0.19 4.1E-06 43.8 9.5 79 152-233 10-98 (256)
407 COG2084 MmsB 3-hydroxyisobutyr 95.1 0.32 6.9E-06 43.2 10.7 88 155-257 2-97 (286)
408 PF02737 3HCDH_N: 3-hydroxyacy 95.1 0.28 6.1E-06 40.6 9.9 38 155-193 1-38 (180)
409 TIGR00563 rsmB ribosomal RNA s 95.0 0.28 6E-06 46.6 11.2 102 145-255 231-368 (426)
410 PRK06398 aldose dehydrogenase; 95.0 0.09 2E-06 46.1 7.4 74 152-233 5-82 (258)
411 PRK06720 hypothetical protein; 95.0 0.23 5.1E-06 40.6 9.3 38 152-190 15-53 (169)
412 cd01487 E1_ThiF_like E1_ThiF_l 95.0 0.22 4.7E-06 41.0 9.2 33 155-187 1-33 (174)
413 PRK07340 ornithine cyclodeamin 95.0 0.17 3.6E-06 45.7 9.2 94 151-258 123-220 (304)
414 PF01564 Spermine_synth: Sperm 95.0 0.13 2.8E-06 44.9 8.2 96 152-255 76-191 (246)
415 PLN02928 oxidoreductase family 95.0 0.15 3.3E-06 46.9 9.0 96 152-256 158-263 (347)
416 PRK06113 7-alpha-hydroxysteroi 95.0 0.18 3.8E-06 44.0 9.2 79 152-233 10-98 (255)
417 COG1179 Dinucleotide-utilizing 95.0 0.48 1E-05 40.6 11.1 102 152-257 29-155 (263)
418 TIGR00417 speE spermidine synt 95.0 0.3 6.4E-06 43.3 10.5 102 151-255 71-186 (270)
419 PRK06935 2-deoxy-D-gluconate 3 95.0 0.18 3.8E-06 44.1 9.1 78 152-233 14-101 (258)
420 PRK08300 acetaldehyde dehydrog 95.0 0.35 7.6E-06 43.3 10.8 92 154-255 5-100 (302)
421 PRK06522 2-dehydropantoate 2-r 95.0 0.13 2.9E-06 46.2 8.4 84 155-245 2-87 (304)
422 TIGR02752 MenG_heptapren 2-hep 94.9 0.12 2.6E-06 44.5 7.8 103 144-256 37-152 (231)
423 TIGR02632 RhaD_aldol-ADH rhamn 94.9 0.15 3.4E-06 51.3 9.6 113 107-233 379-503 (676)
424 COG1052 LdhA Lactate dehydroge 94.9 0.31 6.7E-06 44.3 10.6 88 152-256 145-237 (324)
425 PRK08945 putative oxoacyl-(acy 94.9 0.2 4.4E-06 43.4 9.3 83 150-233 9-102 (247)
426 TIGR01963 PHB_DH 3-hydroxybuty 94.9 0.18 3.9E-06 43.7 8.9 77 154-233 2-88 (255)
427 PF10294 Methyltransf_16: Puta 94.9 0.066 1.4E-06 44.0 5.7 101 148-255 41-155 (173)
428 TIGR03215 ac_ald_DH_ac acetald 94.9 0.32 6.8E-06 43.3 10.3 88 155-255 3-94 (285)
429 PRK12936 3-ketoacyl-(acyl-carr 94.9 0.22 4.7E-06 43.0 9.3 79 152-233 5-90 (245)
430 PRK08220 2,3-dihydroxybenzoate 94.9 0.39 8.5E-06 41.6 11.0 74 152-233 7-86 (252)
431 KOG0725 Reductases with broad 94.9 0.13 2.9E-06 45.5 7.9 81 152-233 7-99 (270)
432 PRK12743 oxidoreductase; Provi 94.9 0.22 4.8E-06 43.5 9.4 78 153-233 2-90 (256)
433 cd05211 NAD_bind_Glu_Leu_Phe_V 94.9 0.44 9.6E-06 40.7 10.8 35 152-187 22-57 (217)
434 PRK06463 fabG 3-ketoacyl-(acyl 94.8 0.21 4.5E-06 43.6 9.2 79 152-233 6-89 (255)
435 PRK05597 molybdopterin biosynt 94.8 0.24 5.3E-06 45.7 9.9 36 152-187 27-62 (355)
436 PLN02256 arogenate dehydrogena 94.8 0.6 1.3E-05 42.1 12.1 97 144-256 27-128 (304)
437 PRK12550 shikimate 5-dehydroge 94.8 0.14 3.1E-06 45.3 7.9 47 149-195 118-164 (272)
438 COG0144 Sun tRNA and rRNA cyto 94.8 0.21 4.5E-06 46.2 9.3 102 146-255 150-288 (355)
439 PRK05650 short chain dehydroge 94.8 0.22 4.9E-06 43.8 9.3 76 155-233 2-87 (270)
440 PRK07775 short chain dehydroge 94.7 0.22 4.9E-06 44.0 9.2 78 153-233 10-97 (274)
441 PRK07792 fabG 3-ketoacyl-(acyl 94.7 0.31 6.7E-06 44.0 10.2 81 152-233 11-99 (306)
442 PRK05562 precorrin-2 dehydroge 94.7 0.22 4.8E-06 42.5 8.6 93 152-256 24-117 (223)
443 PRK07102 short chain dehydroge 94.7 0.29 6.3E-06 42.3 9.7 76 154-233 2-86 (243)
444 PRK06940 short chain dehydroge 94.7 0.28 6E-06 43.5 9.7 77 153-233 2-86 (275)
445 PRK06997 enoyl-(acyl carrier p 94.7 0.2 4.4E-06 44.0 8.7 79 152-233 5-94 (260)
446 TIGR00452 methyltransferase, p 94.6 0.17 3.8E-06 45.7 8.2 99 144-255 113-225 (314)
447 PRK06436 glycerate dehydrogena 94.6 0.25 5.4E-06 44.5 9.2 35 152-187 121-155 (303)
448 PRK05708 2-dehydropantoate 2-r 94.6 0.15 3.2E-06 46.1 7.8 95 155-254 4-103 (305)
449 PRK13255 thiopurine S-methyltr 94.6 0.58 1.3E-05 40.0 11.0 101 149-255 34-155 (218)
450 PRK08278 short chain dehydroge 94.6 0.25 5.3E-06 43.7 9.1 36 152-188 5-41 (273)
451 PRK12747 short chain dehydroge 94.6 0.87 1.9E-05 39.5 12.5 38 152-190 3-42 (252)
452 PLN00016 RNA-binding protein; 94.6 0.44 9.5E-06 44.4 11.2 97 151-256 50-165 (378)
453 PRK06523 short chain dehydroge 94.6 0.18 3.9E-06 44.1 8.1 75 152-232 8-86 (260)
454 PRK03562 glutathione-regulated 94.6 0.3 6.4E-06 48.7 10.4 77 153-235 400-476 (621)
455 PRK07066 3-hydroxybutyryl-CoA 94.6 0.72 1.6E-05 41.9 12.0 39 154-193 8-46 (321)
456 TIGR02622 CDP_4_6_dhtase CDP-g 94.5 0.2 4.2E-06 46.1 8.6 75 152-233 3-85 (349)
457 TIGR00446 nop2p NOL1/NOP2/sun 94.5 1.2 2.7E-05 39.2 13.2 101 147-255 66-199 (264)
458 PRK08219 short chain dehydroge 94.5 0.2 4.4E-06 42.6 8.1 74 154-233 4-81 (227)
459 PLN02735 carbamoyl-phosphate s 94.5 0.55 1.2E-05 50.0 12.7 98 136-241 6-116 (1102)
460 PF05368 NmrA: NmrA-like famil 94.5 0.54 1.2E-05 40.4 10.8 70 156-232 1-73 (233)
461 PRK14188 bifunctional 5,10-met 94.5 0.42 9.1E-06 42.8 10.1 93 132-257 137-232 (296)
462 TIGR00872 gnd_rel 6-phosphoglu 94.5 0.57 1.2E-05 42.1 11.3 89 155-256 2-94 (298)
463 PRK10669 putative cation:proto 94.5 0.31 6.7E-06 48.0 10.3 76 154-235 418-493 (558)
464 PRK12335 tellurite resistance 94.5 0.083 1.8E-06 47.3 5.8 91 152-255 120-223 (287)
465 PRK01438 murD UDP-N-acetylmura 94.5 0.34 7.3E-06 46.8 10.4 69 152-233 15-88 (480)
466 PRK07097 gluconate 5-dehydroge 94.5 0.31 6.7E-06 42.8 9.4 79 152-233 9-97 (265)
467 PRK11064 wecC UDP-N-acetyl-D-m 94.5 0.52 1.1E-05 44.6 11.3 73 154-234 4-86 (415)
468 PRK09599 6-phosphogluconate de 94.5 0.77 1.7E-05 41.4 12.0 43 155-198 2-44 (301)
469 PRK07791 short chain dehydroge 94.4 0.36 7.9E-06 43.0 9.9 79 152-233 5-102 (286)
470 PRK05557 fabG 3-ketoacyl-(acyl 94.4 0.3 6.5E-06 42.0 9.2 79 152-233 4-93 (248)
471 PLN02490 MPBQ/MSBQ methyltrans 94.4 0.27 5.8E-06 45.0 9.0 99 151-256 112-216 (340)
472 PRK15461 NADH-dependent gamma- 94.4 0.56 1.2E-05 42.2 11.0 71 155-239 3-73 (296)
473 cd01492 Aos1_SUMO Ubiquitin ac 94.4 0.49 1.1E-05 39.7 10.0 35 152-186 20-54 (197)
474 PRK14030 glutamate dehydrogena 94.4 1.6 3.4E-05 41.4 14.2 31 152-183 227-257 (445)
475 PRK05565 fabG 3-ketoacyl-(acyl 94.4 0.29 6.3E-06 42.2 9.0 78 153-233 5-93 (247)
476 PF13659 Methyltransf_26: Meth 94.4 0.15 3.2E-06 38.5 6.3 93 153-254 1-114 (117)
477 PRK00216 ubiE ubiquinone/menaq 94.4 0.55 1.2E-05 40.3 10.7 104 146-257 45-160 (239)
478 PLN02336 phosphoethanolamine N 94.4 0.22 4.9E-06 47.9 8.9 104 145-256 259-370 (475)
479 PRK05600 thiamine biosynthesis 94.4 0.41 8.9E-06 44.4 10.2 35 152-186 40-74 (370)
480 PRK13403 ketol-acid reductoiso 94.3 0.65 1.4E-05 41.9 10.9 87 151-254 14-104 (335)
481 PRK08063 enoyl-(acyl carrier p 94.3 0.32 6.9E-06 42.1 9.1 79 152-233 3-92 (250)
482 PRK03659 glutathione-regulated 94.3 0.33 7.2E-06 48.2 10.1 93 154-253 401-496 (601)
483 PRK08303 short chain dehydroge 94.3 0.35 7.5E-06 43.7 9.4 34 152-186 7-41 (305)
484 PTZ00079 NADP-specific glutama 94.3 1.2 2.5E-05 42.3 12.9 35 151-186 235-269 (454)
485 PLN02657 3,8-divinyl protochlo 94.3 0.3 6.5E-06 45.8 9.3 105 149-257 56-183 (390)
486 PF01113 DapB_N: Dihydrodipico 94.3 0.72 1.6E-05 35.5 9.9 91 155-258 2-100 (124)
487 PRK12938 acetyacetyl-CoA reduc 94.3 0.19 4E-06 43.5 7.4 78 153-233 3-91 (246)
488 PRK12480 D-lactate dehydrogena 94.2 0.56 1.2E-05 42.8 10.7 86 152-256 145-235 (330)
489 COG3288 PntA NAD/NADP transhyd 94.2 0.2 4.3E-06 44.4 7.2 131 149-281 160-308 (356)
490 PRK05855 short chain dehydroge 94.2 0.26 5.7E-06 48.4 9.2 79 152-233 314-402 (582)
491 TIGR01532 E4PD_g-proteo D-eryt 94.1 0.54 1.2E-05 42.8 10.2 94 155-257 1-122 (325)
492 PLN02396 hexaprenyldihydroxybe 94.1 0.23 5.1E-06 45.1 7.9 96 151-255 130-235 (322)
493 PRK12490 6-phosphogluconate de 94.1 0.69 1.5E-05 41.6 11.0 43 155-198 2-44 (299)
494 PRK05447 1-deoxy-D-xylulose 5- 94.1 0.69 1.5E-05 42.8 10.9 94 154-254 2-120 (385)
495 PF08241 Methyltransf_11: Meth 94.1 0.058 1.3E-06 38.8 3.3 86 157-253 1-95 (95)
496 PRK14902 16S rRNA methyltransf 94.1 0.51 1.1E-05 45.0 10.6 102 146-254 244-378 (444)
497 PRK14903 16S rRNA methyltransf 94.1 1.5 3.2E-05 41.7 13.5 102 146-256 231-367 (431)
498 PRK14106 murD UDP-N-acetylmura 94.1 0.34 7.3E-06 46.3 9.4 70 152-233 4-78 (450)
499 PF01408 GFO_IDH_MocA: Oxidore 94.1 1.8 3.9E-05 32.7 11.9 88 155-256 2-93 (120)
500 TIGR02415 23BDH acetoin reduct 94.1 0.59 1.3E-05 40.5 10.3 77 154-233 1-87 (254)
No 1
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=6e-55 Score=377.36 Aligned_cols=312 Identities=45% Similarity=0.801 Sum_probs=298.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.||.++|||.+|+|++||++|+++++||+|+..+..+||+|.+|+++.+|+|.....+...|...+|+.|+. -+|..+.
T Consensus 54 ~~P~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~ 132 (366)
T COG1062 54 GFPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVY 132 (366)
T ss_pred CCceecccccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCccee
Confidence 499999999999999999999999999999999999999999999999999998877767888899999999 8999999
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
|+++.++|+||.++++..+++++++.+++.++++.|...|.+.+..+.++++++++|.|.|.|++|++++|-|+..|+.+
T Consensus 133 h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~ 212 (366)
T COG1062 133 HYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGR 212 (366)
T ss_pred eeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCc-cHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDK-SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~-~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|++++.+++|++++++||+++++|..+ . ++.+.+.+++++++|++|||+|+...++.+++++.+ ||+.+.+|...
T Consensus 213 IiAvD~~~~Kl~~A~~fGAT~~vn~~~---~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~ 288 (366)
T COG1062 213 IIAVDINPEKLELAKKFGATHFVNPKE---VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAG 288 (366)
T ss_pred EEEEeCCHHHHHHHHhcCCceeecchh---hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCC
Confidence 999999999999999999999999987 4 699999999999999999999999999999999999 59999999988
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 337 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 337 (339)
.+...++++..+... .++.|+.++....+.++..+++++.+|++++.++++++++|+|+++||+.|.+++.+|.||.+
T Consensus 289 ~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 289 AGQEISTRPFQLVTG-RVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred CCceeecChHHeecc-ceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 788888888888885 999999999988899999999999999999999999999999999999999999999888764
No 2
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.2e-54 Score=366.90 Aligned_cols=318 Identities=56% Similarity=0.984 Sum_probs=300.4
Q ss_pred cCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCC-CCCCCCCCcccccccCC
Q 019535 17 CRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-SPWMPRDQTSRFKDLRG 95 (339)
Q Consensus 17 ~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~~g~~~~g~~~~~~~~~ 95 (339)
+...||.|+|||.+|+|+++|++|+++++||+|+..+...|+.|.+|+++.+|+|......- .-++.+||+.||. -+|
T Consensus 57 ~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~g 135 (375)
T KOG0022|consen 57 PEGLFPVILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKG 135 (375)
T ss_pred ccccCceEecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCC
Confidence 44579999999999999999999999999999999999999999999999999999998762 3345579999999 999
Q ss_pred ceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHc
Q 019535 96 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLC 175 (339)
Q Consensus 96 ~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~ 175 (339)
.+++|+.++++|+||.+++...+.++++..+++.++++.|.++|+|.|+++.+++++|+++.|.|.|++|+++++-||+.
T Consensus 136 k~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~ 215 (375)
T KOG0022|consen 136 KPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAA 215 (375)
T ss_pred CceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
|+.++|+++.++++.+.++++|+...+|..+.. ..+.+.+.++|++++|+.|||+|+..++.+++.+...+||.-+.+|
T Consensus 216 GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~-~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iG 294 (375)
T KOG0022|consen 216 GASRIIGVDINPDKFEKAKEFGATEFINPKDLK-KPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIG 294 (375)
T ss_pred CcccEEEEecCHHHHHHHHhcCcceecChhhcc-ccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEE
Confidence 999999999999999999999999999988632 4689999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEE
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 335 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl 335 (339)
....++.+++.+..++. +.++.|+.+|.+..+.++..+++.+.++++++..+|+|++|++++++||+.|.+++.+|.||
T Consensus 295 v~~~~~~i~~~p~~l~~-GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl 373 (375)
T KOG0022|consen 295 VAAAGQEISTRPFQLVT-GRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVL 373 (375)
T ss_pred ecCCCcccccchhhhcc-ccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEE
Confidence 98888888888888887 88999999999999999999999999999999999999999999999999999999999888
Q ss_pred Ee
Q 019535 336 WM 337 (339)
Q Consensus 336 ~~ 337 (339)
++
T Consensus 374 ~~ 375 (375)
T KOG0022|consen 374 WM 375 (375)
T ss_pred eC
Confidence 74
No 3
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=3.1e-53 Score=374.74 Aligned_cols=283 Identities=29% Similarity=0.478 Sum_probs=257.6
Q ss_pred CCCCCcccCCceeEEEEEecCCCCCcCCCCEEee-ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCc
Q 019535 18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIP-HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 96 (339)
Q Consensus 18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~ 96 (339)
...+|+|||||.+|+|+++|++|++|++||||.+ +...+|+.|.+|++|++|+|++... +||+.+|
T Consensus 54 ~~~~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G---------- 120 (339)
T COG1064 54 VPKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG---------- 120 (339)
T ss_pred CCCCCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccc---cceeecC----------
Confidence 3459999999999999999999999999999977 8889999999999999999999775 8888888
Q ss_pred eeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535 97 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG 176 (339)
Q Consensus 97 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G 176 (339)
+|+||+++|+++++++|+++++++||.+.|++.|+|++|.+ .+++++++|+|+|.|++|.+++|+|+++|
T Consensus 121 ---------Gyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~-~~~~pG~~V~I~G~GGlGh~avQ~Aka~g 190 (339)
T COG1064 121 ---------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKK-ANVKPGKWVAVVGAGGLGHMAVQYAKAMG 190 (339)
T ss_pred ---------cceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhh-cCCCCCCEEEEECCcHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999998755 89999999999999999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+ +|+++++++++++.++++|++++++.++ ++..+.+++. +|+++|+++ +..++.+++.|+++ |+++++|.
T Consensus 191 a-~Via~~~~~~K~e~a~~lGAd~~i~~~~---~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~ 260 (339)
T COG1064 191 A-EVIAITRSEEKLELAKKLGADHVINSSD---SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGL 260 (339)
T ss_pred C-eEEEEeCChHHHHHHHHhCCcEEEEcCC---chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECC
Confidence 8 9999999999999999999999999777 6777777664 999999999 77799999999998 99999998
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 335 (339)
........++...+..+++++.|+..++ +.++++++++..+|++.+. +.+.++++++++||+.|++++.. |+||
T Consensus 261 ~~~~~~~~~~~~~li~~~~~i~GS~~g~---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi 335 (339)
T COG1064 261 PGGGPIPLLPAFLLILKEISIVGSLVGT---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVI 335 (339)
T ss_pred CCCcccCCCCHHHhhhcCeEEEEEecCC---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEe
Confidence 7423335577888888999999998877 4689999999999977665 44799999999999999999877 9999
Q ss_pred EeC
Q 019535 336 WMG 338 (339)
Q Consensus 336 ~~~ 338 (339)
++.
T Consensus 336 ~~~ 338 (339)
T COG1064 336 DMS 338 (339)
T ss_pred cCC
Confidence 875
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-51 Score=352.14 Aligned_cols=300 Identities=27% Similarity=0.465 Sum_probs=263.4
Q ss_pred CCCCCcccCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcc
Q 019535 10 TAGKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTS 88 (339)
Q Consensus 10 ~~g~~~~~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~ 88 (339)
+.|.......+.|+++|||.+|+|.++|++|+++|+||||++-|..+|+.|.+|+.|+||+|++-.| .+.+ .+|
T Consensus 50 ~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f---~atpp~~G-- 124 (354)
T KOG0024|consen 50 THGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVF---CATPPVDG-- 124 (354)
T ss_pred ccCCcCccccccccccccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCcccc---ccCCCcCC--
Confidence 3455555556899999999999999999999999999999999999999999999999999998886 4433 455
Q ss_pred cccccCCceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHH
Q 019535 89 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAV 168 (339)
Q Consensus 89 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a 168 (339)
++++|++.++++++|||+++|++++|++. ++++++||. ++++++.|++|||+|+|++|+++
T Consensus 125 -----------------~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t 185 (354)
T KOG0024|consen 125 -----------------TLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLT 185 (354)
T ss_pred -----------------ceEEEEEechHheeeCCCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHH
Confidence 99999999999999999999999999998 899999965 67999999999999999999999
Q ss_pred HHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCC-CccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhc
Q 019535 169 AEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG-DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRK 246 (339)
Q Consensus 169 ~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~-~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~ 246 (339)
...|+++|+.+|+.++..++|++.++++|++.+.+..... .+++.+.++...++ .+|+.|||+|...+++.++..++.
T Consensus 186 ~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~ 265 (354)
T KOG0024|consen 186 GLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRS 265 (354)
T ss_pred HHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhcc
Confidence 9999999999999999999999999999999887665521 23444555555554 699999999999999999999999
Q ss_pred CCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHh
Q 019535 247 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI 326 (339)
Q Consensus 247 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~ 326 (339)
+ |++++.|.. .....+++.....|+++++|++- ..+.+|..+++++.+|+++++++||+.|+++++.+||+.++
T Consensus 266 g-Gt~vlvg~g--~~~~~fpi~~v~~kE~~~~g~fr---y~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~ 339 (354)
T KOG0024|consen 266 G-GTVVLVGMG--AEEIQFPIIDVALKEVDLRGSFR---YCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQ 339 (354)
T ss_pred C-CEEEEeccC--CCccccChhhhhhheeeeeeeee---eccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHH
Confidence 8 999888864 55677888888899999998852 22458999999999999999999999999999999999998
Q ss_pred cCc--eeEEEEEeCC
Q 019535 327 KGK--CLRCVIWMGE 339 (339)
Q Consensus 327 ~~~--~~kvvl~~~~ 339 (339)
.+. .+|+++..++
T Consensus 340 ~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 340 HGEEGVIKVIITGPE 354 (354)
T ss_pred hCcCCceEEEEeCCC
Confidence 877 4599998764
No 5
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=4.9e-45 Score=338.64 Aligned_cols=311 Identities=36% Similarity=0.633 Sum_probs=257.7
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|++++++++||||++.+..+|+.|.+|+.+.+++|.........|...+|..++. .++..+.
T Consensus 60 ~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~-~~~~~~~ 138 (371)
T cd08281 60 PLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLR-LRGGEIN 138 (371)
T ss_pred CCCccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCccccc-ccCcccc
Confidence 579999999999999999999999999999988888999999999999999986532111121111100000 0000011
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
+..+.|+|+||+.++++.++++|+++++++|+.+++++.|||+++.+.++++++++|||.|+|++|++++|+|+..|+++
T Consensus 139 ~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~ 218 (371)
T cd08281 139 HHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQ 218 (371)
T ss_pred cccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 11123599999999999999999999999999999999999998888888999999999999999999999999999966
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 259 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 259 (339)
|++++++++++++++++|+++++++.+ +++.+.+++++.+++|++|||+|.+..++.++++++++ |+++.+|....
T Consensus 219 Vi~~~~~~~r~~~a~~~Ga~~~i~~~~---~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~ 294 (371)
T cd08281 219 VVAVDLNEDKLALARELGATATVNAGD---PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDP 294 (371)
T ss_pred EEEEcCCHHHHHHHHHcCCceEeCCCc---hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCC
Confidence 999999999999999999999999877 78888888887668999999999877799999999997 99999997543
Q ss_pred CCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEE
Q 019535 260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 335 (339)
Q Consensus 260 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl 335 (339)
.....++...++.|++++.+++.+.+..++++.++++++.+|++++..+++++|+++++++||+.+.++...|.||
T Consensus 295 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 295 EARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred CceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 3345667777888999999987665544567899999999999998888999999999999999999888774443
No 6
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-45 Score=316.06 Aligned_cols=290 Identities=27% Similarity=0.433 Sum_probs=252.1
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEE-eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V-~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
..+|+|+|||.+|+|+++|++|++|++|||| +-+...+|..|.+|..+.+++|+...++ ..|+..||+.
T Consensus 63 s~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t-~~g~~~DGt~--------- 132 (360)
T KOG0023|consen 63 SKYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFT-YNGVYHDGTI--------- 132 (360)
T ss_pred ccCCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEe-ccccccCCCC---------
Confidence 5899999999999999999999999999999 6677789999999999999999943222 3677777732
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 177 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~ 177 (339)
..|+||+|+++++.+++++|++++++.||.+.|+..|+|.+| ...++.+|+++.|.|+|++|.+++|+|+++|.
T Consensus 133 -----~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~ 206 (360)
T KOG0023|consen 133 -----TQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM 206 (360)
T ss_pred -----ccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc
Confidence 245899999999999999999999999999999999999976 55788999999999997799999999999999
Q ss_pred CEEEEEcCCh-hHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 178 TRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~-~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+|++++++. ++.+.++.|||+..++..+ ..++.+.+...+++++|-+.+. ....++.++.+++.+ |++|++|.
T Consensus 207 -rV~vis~~~~kkeea~~~LGAd~fv~~~~--d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~ 280 (360)
T KOG0023|consen 207 -RVTVISTSSKKKEEAIKSLGADVFVDSTE--DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGL 280 (360)
T ss_pred -EEEEEeCCchhHHHHHHhcCcceeEEecC--CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeC
Confidence 999999987 6677778899999888773 2889999988877777777665 455589999999998 99999998
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 335 (339)
+. .+..+++.++..+.+.+.|+..|+ +.+.++++++..++.+..+ | +..+++++++||+.|.++... |.||
T Consensus 281 p~--~~~~~~~~~lil~~~~I~GS~vG~---~ket~E~Ldf~a~~~ik~~--I-E~v~~~~v~~a~erm~kgdV~yRfVv 352 (360)
T KOG0023|consen 281 PE--KPLKLDTFPLILGRKSIKGSIVGS---RKETQEALDFVARGLIKSP--I-ELVKLSEVNEAYERMEKGDVRYRFVV 352 (360)
T ss_pred cC--CcccccchhhhcccEEEEeecccc---HHHHHHHHHHHHcCCCcCc--e-EEEehhHHHHHHHHHHhcCeeEEEEE
Confidence 64 367888888888899999998887 4688999999999977655 5 899999999999999999977 9999
Q ss_pred EeC
Q 019535 336 WMG 338 (339)
Q Consensus 336 ~~~ 338 (339)
++.
T Consensus 353 D~s 355 (360)
T KOG0023|consen 353 DVS 355 (360)
T ss_pred Ecc
Confidence 864
No 7
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=4.8e-44 Score=331.61 Aligned_cols=315 Identities=47% Similarity=0.894 Sum_probs=253.6
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|+++++|++||+|+..+..+|+.|.+|+.+++++|.+.......|...+|..++. .+|...
T Consensus 54 ~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~-~~g~~~ 132 (368)
T cd08300 54 GLFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFS-CKGKPI 132 (368)
T ss_pred CCCCceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccc-cCCccc
Confidence 3689999999999999999999999999999988889999999999999999976431101122222200000 112222
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
.+..+.|+|+||+.++++.++++|+++++++++.+++++.|||+++.+..+++++++|||+|+|++|++++|+|+.+|++
T Consensus 133 ~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~ 212 (368)
T cd08300 133 YHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGAS 212 (368)
T ss_pred ccccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 22334569999999999999999999999999999999999999887888899999999999999999999999999996
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
+|+++++++++.++++++|+++++++.+ ..+++.+.+.+++++++|++|||+|++..++.+++++++++|+++.+|...
T Consensus 213 ~vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~ 291 (368)
T cd08300 213 RIIGIDINPDKFELAKKFGATDCVNPKD-HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAA 291 (368)
T ss_pred eEEEEeCCHHHHHHHHHcCCCEEEcccc-cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCC
Confidence 7999999999999999999999998765 012577888888777999999999987779999999977339999999753
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEE
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 336 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 336 (339)
......+....+.. +..+.++..+.+..++++.++++++.++++++.++++++|+|+++++||+.+.++...|++|+
T Consensus 292 ~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 292 AGQEISTRPFQLVT-GRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred CCCccccCHHHHhh-cCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 22233344444443 456667666555556778999999999999888889999999999999999988877799885
No 8
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=3.6e-44 Score=331.34 Aligned_cols=303 Identities=35% Similarity=0.593 Sum_probs=255.9
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCC-CCCCCCCCCcccccccCCcee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK-ISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~-~~~g~~~~g~~~~~~~~~~~~ 98 (339)
.+|.++|||++|+|+++|++|++|++||+|++.+...|+.|.+|+.+++++|...... ...++ .+| ...
T Consensus 53 ~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~-~~g---------~~~ 122 (358)
T TIGR03451 53 EFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTL-TDG---------TEL 122 (358)
T ss_pred cCCcccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCcccccccccc-ccC---------ccc
Confidence 5799999999999999999999999999999989999999999999999999753210 00000 011 000
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
....+.|+|+||+.++++.++++|+++++++++.+++++.|+|+++.+..+++++++|||+|+|++|++++|+|+..|++
T Consensus 123 ~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~ 202 (358)
T TIGR03451 123 SPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGAS 202 (358)
T ss_pred ccccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 00112359999999999999999999999999999999999998887888899999999999999999999999999996
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|+++++++++.++++++|+++++++.+ +++.+.+++.+++ ++|++|||+|++..++.++++++++ |+++.+|..
T Consensus 203 ~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~ 278 (358)
T TIGR03451 203 KIIAVDIDDRKLEWAREFGATHTVNSSG---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVP 278 (358)
T ss_pred eEEEEcCCHHHHHHHHHcCCceEEcCCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCC
Confidence 6999999999999999999999999877 7888889998887 8999999999877799999999997 999999976
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEE
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 336 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 336 (339)
.......++...++.+++++.+++.+.....+++.++++++.+|++++..+++++|+++++++|++.+++++..|++|.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 357 (358)
T TIGR03451 279 TPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE 357 (358)
T ss_pred CCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence 4333455666677888999998865433335678899999999999888889999999999999999988877788875
No 9
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.7e-44 Score=332.99 Aligned_cols=314 Identities=51% Similarity=0.918 Sum_probs=253.8
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC----CCCccccccc-
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP----RDQTSRFKDL- 93 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~----~~g~~~~~~~- 93 (339)
..+|.++|||++|+|+++|+++++|++||||++.+..+|+.|.+|+.+.+++|.+... .++. .+|..+++..
T Consensus 63 ~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~---~~~~~~~~~~g~~~~~~~~ 139 (381)
T PLN02740 63 RAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRV---DPFKSVMVNDGKTRFSTKG 139 (381)
T ss_pred CCCCccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccc---cccccccccCCCccccccc
Confidence 3679999999999999999999999999999999999999999999999999987542 1110 0010000000
Q ss_pred CCceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHH
Q 019535 94 RGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR 173 (339)
Q Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~ 173 (339)
.+....+....|+|+||++++.+.++++|+++++++++.+++++.|||+++.+.++++++++|||+|+|++|++++|+|+
T Consensus 140 ~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak 219 (381)
T PLN02740 140 DGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGAR 219 (381)
T ss_pred CCCcccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 00000111223599999999999999999999999999999999999998878889999999999999999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535 174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 253 (339)
Q Consensus 174 ~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 253 (339)
.+|+++|+++++++++.++++++|++.++++.+ ...++.+.+++++++++|++||++|.+..+..+++++++++|+++.
T Consensus 220 ~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~ 298 (381)
T PLN02740 220 ARGASKIIGVDINPEKFEKGKEMGITDFINPKD-SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVL 298 (381)
T ss_pred HCCCCcEEEEcCChHHHHHHHHcCCcEEEeccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEE
Confidence 999866999999999999999999999998765 0124777888877668999999999987799999999882399999
Q ss_pred eccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEE
Q 019535 254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRC 333 (339)
Q Consensus 254 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kv 333 (339)
+|.......+.+....++ ++.++.|+..+.+....++.++++++.++++++..+++++|+|+++++|++.+.++...|+
T Consensus 299 ~G~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~ 377 (381)
T PLN02740 299 LGIHPTPKMLPLHPMELF-DGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRC 377 (381)
T ss_pred EccCCCCceecccHHHHh-cCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeE
Confidence 997643222344443333 5889998877665544578999999999999888889999999999999999988877899
Q ss_pred EEEe
Q 019535 334 VIWM 337 (339)
Q Consensus 334 vl~~ 337 (339)
+|++
T Consensus 378 ~~~~ 381 (381)
T PLN02740 378 LLHL 381 (381)
T ss_pred EEeC
Confidence 9874
No 10
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=5.8e-44 Score=330.88 Aligned_cols=316 Identities=47% Similarity=0.878 Sum_probs=251.5
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|++|++|++||||+..+..+|+.|.+|+.+.+++|.+......+|+..+|.-++. .+|-.+
T Consensus 53 ~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~g~~~ 131 (368)
T TIGR02818 53 GVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFS-KDGQPI 131 (368)
T ss_pred CCCCeeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccc-cCCCcc
Confidence 3579999999999999999999999999999988888999999999999999986432111222222100000 001011
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
++..+.|+|+||+++|++.++++|+++++++++.+++++.|||+++.+..+++++++|||+|+|++|++++|+|+.+|++
T Consensus 132 ~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~ 211 (368)
T TIGR02818 132 YHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKAS 211 (368)
T ss_pred cccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 11122459999999999999999999999999999999999999888888999999999999999999999999999986
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
+|+++++++++++.++++|++++++..+ ...++.+.+++++++++|++|||+|++..+..+++++++++|+++.+|...
T Consensus 212 ~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~ 290 (368)
T TIGR02818 212 RIIAIDINPAKFELAKKLGATDCVNPND-YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAG 290 (368)
T ss_pred eEEEEcCCHHHHHHHHHhCCCeEEcccc-cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccC
Confidence 7999999999999999999999988663 113466778787766899999999987779999999977239999999754
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 337 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 337 (339)
......+....++. +..+.++..+....+.++.++++++.++++++.++++++|+|+++++|++.++++...|++|++
T Consensus 291 ~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 291 AGQEISTRPFQLVT-GRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred CCCcccccHHHHhc-cceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 33333444444443 4456666554433345789999999999998888899999999999999999887777999875
No 11
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.4e-43 Score=325.15 Aligned_cols=286 Identities=28% Similarity=0.437 Sum_probs=248.3
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|++|++|++||+|+..+..+|+.|..|+.++.++|..... .+|+..+|
T Consensus 53 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~G------------- 117 (339)
T cd08239 53 YQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRDG------------- 117 (339)
T ss_pred CCCceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCccc--ccccCCCC-------------
Confidence 368999999999999999999999999999999999999999999999999986653 24444444
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
+|+||++++.+.++++|+++++++|+.+++++.|||+++ +.++++++++|||+|+|++|++++|+|+.+|+++
T Consensus 118 ------~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~ 190 (339)
T cd08239 118 ------GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAED 190 (339)
T ss_pred ------cceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 999999999999999999999999999999999999976 5678889999999999999999999999999944
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+++++++++.++++++|++.++++++ .+ .+.+.+++.+ ++|++|||+|+...++.++++++++ |+++.+|...
T Consensus 191 vi~~~~~~~~~~~~~~~ga~~~i~~~~---~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 265 (339)
T cd08239 191 VIGVDPSPERLELAKALGADFVINSGQ---DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGG 265 (339)
T ss_pred EEEECCCHHHHHHHHHhCCCEEEcCCc---ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCC
Confidence 999999999999999999999999877 55 6777788777 9999999999988678999999997 9999999753
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 337 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 337 (339)
. .... ....++.+++++.+++... .+++.++++++.++++.+.++++++|+++++++||+.++++...|+||++
T Consensus 266 ~-~~~~-~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 266 E-LTIE-VSNDLIRKQRTLIGSWYFS---VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred C-cccC-cHHHHHhCCCEEEEEecCC---HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 2 2222 1235677899999886543 35789999999999998888899999999999999999887656999875
No 12
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=3.6e-43 Score=326.06 Aligned_cols=314 Identities=53% Similarity=0.967 Sum_probs=255.6
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCcccccccCCce
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGET 97 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~ 97 (339)
..+|.++|||++|+|+++|++|++|++||||+..+..+|+.|..|+.+++++|.........|... ++..++. .+|..
T Consensus 54 ~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~-~~g~~ 132 (369)
T cd08301 54 PLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFS-INGKP 132 (369)
T ss_pred CCCCcccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccc-cCCcc
Confidence 468999999999999999999999999999999899999999999999999998754211112111 0000000 11111
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 177 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~ 177 (339)
..++.+.|+|+||+.+++..++++|+++++++++++++++.|||+++.+..+++++++|||+|+|++|++++|+|+.+|+
T Consensus 133 ~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~ 212 (369)
T cd08301 133 IYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGA 212 (369)
T ss_pred eeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 12222346999999999999999999999999999999999999988888899999999999999999999999999998
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhc-CCcEEEEecc
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK-GWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~-~~G~~v~~g~ 256 (339)
++|+++++++++.++++++|++.++++.+. ...+.+.+++++++++|++|||+|.+..+..+++++++ + |+++.+|.
T Consensus 213 ~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~-~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~~g~ 290 (369)
T cd08301 213 SRIIGVDLNPSKFEQAKKFGVTEFVNPKDH-DKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW-GVTVLLGV 290 (369)
T ss_pred CeEEEEcCCHHHHHHHHHcCCceEEccccc-chhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCC-CEEEEECc
Confidence 679999999999999999999988876541 12466777777766899999999988778899999999 4 89999997
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEE
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 336 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 336 (339)
........++...++ +++++.++..+.+..+.+++++++++.++++++.++++++|+|+++++||+.+.+++.+|++|.
T Consensus 291 ~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 369 (369)
T cd08301 291 PHKDAVFSTHPMNLL-NGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCILH 369 (369)
T ss_pred CCCCcccccCHHHHh-cCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEeC
Confidence 643334455544444 5899999877666555678999999999999888888999999999999999999888898873
No 13
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=3.6e-43 Score=322.83 Aligned_cols=286 Identities=20% Similarity=0.299 Sum_probs=238.0
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++ ++++|++||||+..+..+|+.|.+|+.+.+++|....+ +|.....
T Consensus 57 ~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~------------ 119 (343)
T PRK09880 57 IKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYF------------ 119 (343)
T ss_pred ccCCcccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eeccccc------------
Confidence 468999999999999999 78899999999999999999999999999999987543 3321000
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
....|+|+||++++++.++++|+++++++++.. .++++||+++.+ ....++++|||+|+|++|++++|+|+++|++
T Consensus 120 --~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~al~~-~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~ 195 (343)
T PRK09880 120 --PHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFA-EPLAVAIHAAHQ-AGDLQGKRVFVSGVGPIGCLIVAAVKTLGAA 195 (343)
T ss_pred --CCCCCceeeeEEechHHeEECCCCCCHHHHHhh-cHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence 000249999999999999999999999876644 478899997644 5566899999999999999999999999997
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
+|++++++++++++++++|+++++++++ .++.+.. +. .+++|++|||+|.+..++.++++++++ |+++.+|...
T Consensus 196 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~ 269 (343)
T PRK09880 196 EIVCADVSPRSLSLAREMGADKLVNPQN---DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGG 269 (343)
T ss_pred EEEEEeCCHHHHHHHHHcCCcEEecCCc---ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC
Confidence 7999999999999999999999998876 5544322 21 236999999999977799999999997 9999999753
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEEe
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 337 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 337 (339)
....+++..++.|++++.++... .+++.++++++.++++++.++++++|+++++++|++.+.++... |++|.+
T Consensus 270 --~~~~~~~~~~~~k~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 270 --APPEFPMMTLIVKEISLKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred --CCCccCHHHHHhCCcEEEEEeec----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 23456677788889999887532 35799999999999998888899999999999999999887654 999864
No 14
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1e-42 Score=323.25 Aligned_cols=314 Identities=50% Similarity=0.931 Sum_probs=251.4
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCcccccccCCcee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETI 98 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~~ 98 (339)
.+|.++|||++|+|+++|++|++|++||+|+..+..+|+.|.+|+.+.+++|...... ..|... +...++. ..|..+
T Consensus 62 ~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~-~~g~~~ 139 (378)
T PLN02827 62 LFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFS-IKGKPV 139 (378)
T ss_pred CCCeeecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCccccc-ccCccc
Confidence 5789999999999999999999999999999988889999999999999999864210 001000 0000000 000000
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
.+.-..|+|+||+.++++.++++|+++++++++.+++++.++|+++.+..+++++++|||+|+|++|++++|+|+++|++
T Consensus 140 ~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~ 219 (378)
T PLN02827 140 YHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGAS 219 (378)
T ss_pred ccccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 00001359999999999999999999999999999989999998777778899999999999999999999999999996
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
.|+++++++++.++++++|+++++++++ ..+++.+.+++++++++|++||++|....+..+++.+++++|+++.+|...
T Consensus 220 ~vi~~~~~~~~~~~a~~lGa~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~ 298 (378)
T PLN02827 220 QIIGVDINPEKAEKAKTFGVTDFINPND-LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPK 298 (378)
T ss_pred eEEEECCCHHHHHHHHHcCCcEEEcccc-cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcC
Confidence 6888888999999999999999988764 013577778887766899999999988768999999999339999999754
Q ss_pred CCCcccccH-HHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535 259 PGSQLSLSS-FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 337 (339)
Q Consensus 259 ~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 337 (339)
.. ..+.. ..++.+++++.|+....+....++.++++++.+|++++.++++++|+|+++.+|++.+++++.+|+||.+
T Consensus 299 ~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~ 376 (378)
T PLN02827 299 AK--PEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHM 376 (378)
T ss_pred CC--ccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEe
Confidence 32 23332 3466789999998766554455788999999999998877899999999999999999988878999987
Q ss_pred C
Q 019535 338 G 338 (339)
Q Consensus 338 ~ 338 (339)
.
T Consensus 377 ~ 377 (378)
T PLN02827 377 P 377 (378)
T ss_pred c
Confidence 4
No 15
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=3.9e-42 Score=314.93 Aligned_cols=292 Identities=28% Similarity=0.402 Sum_probs=238.9
Q ss_pred CCCc-ccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 20 VFPR-ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 20 ~~P~-i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..|. ++|||++|+|+++| .++.+++||||++.+..+|+.|.+|+.+.+++|.+..+ +|+...+ .+.
T Consensus 53 ~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~---~g~~~~~----~~~----- 119 (350)
T COG1063 53 PPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGF---YGYAGLG----GGI----- 119 (350)
T ss_pred CCCCcccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccc---ccccccc----CCC-----
Confidence 3444 99999999999999 77789999999999999999999999999999995543 3333211 001
Q ss_pred ecccccccccceEEeeccceEE-cCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVK-VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 177 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~-lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~ 177 (339)
.|+|+||+.+|.++.++ +|+++++++++ +..++++++++........++.+|+|+|+|++|++++++++..|+
T Consensus 120 -----~G~~aEyv~vp~~~~~~~~pd~~~~~~aa-l~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga 193 (350)
T COG1063 120 -----DGGFAEYVRVPADFNLAKLPDGIDEEAAA-LTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGA 193 (350)
T ss_pred -----CCceEEEEEeccccCeecCCCCCChhhhh-hcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 13999999999755555 58888555555 455999998864445555666699999999999999999999999
Q ss_pred CEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 178 TRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
.+|++++.+++|++++++ .|++.+++... ++..+.+.+.+++ ++|++|||+|....++.++++++++ |+++.+|
T Consensus 194 ~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vG 269 (350)
T COG1063 194 SVVIVVDRSPERLELAKEAGGADVVVNPSE---DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVG 269 (350)
T ss_pred ceEEEeCCCHHHHHHHHHhCCCeEeecCcc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEe
Confidence 999999999999999999 66766666555 4677888899998 9999999999998899999999997 9999999
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc--eeEE
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLRC 333 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~--~~kv 333 (339)
....... .++...+..|++++.|+... ..+.+++.+++++.+|++++..++++.++++++++||+.+.+.. ..|+
T Consensus 270 v~~~~~~-~~~~~~~~~kel~l~gs~~~--~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv 346 (350)
T COG1063 270 VYGGEDI-PLPAGLVVSKELTLRGSLRP--SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKV 346 (350)
T ss_pred ccCCccC-ccCHHHHHhcccEEEeccCC--CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEE
Confidence 8754322 56677888999999998421 22467999999999999999999999999999999999998755 3499
Q ss_pred EEEe
Q 019535 334 VIWM 337 (339)
Q Consensus 334 vl~~ 337 (339)
++++
T Consensus 347 ~i~~ 350 (350)
T COG1063 347 VLKP 350 (350)
T ss_pred EecC
Confidence 9864
No 16
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=7.7e-42 Score=316.53 Aligned_cols=313 Identities=50% Similarity=0.935 Sum_probs=253.6
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|++++++++||+|+..+..+|+.|.+|..+.+++|++..+. ..|+..++..++. ..|...
T Consensus 53 ~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~~-~~~~~~ 130 (365)
T cd08277 53 TLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRFT-CKGKKI 130 (365)
T ss_pred CCCCeecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccccCCccccc-cCCccc
Confidence 46789999999999999999999999999999988899999999999999999875421 1222222111100 001011
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
.++.+.|+|+||+.++.+.++++|+++++++++.+++++.|||+++.+..+++++++|||+|+|++|++++|+|+.+|++
T Consensus 131 ~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~ 210 (365)
T cd08277 131 YHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGAS 210 (365)
T ss_pred ccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 11223469999999999999999999999999999999999999887888899999999999999999999999999996
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
+|+++++++++++.++++|++++++..+ ...++.+.+++++++++|++|||+|.+..+..+++++++++|+++.+|...
T Consensus 211 ~Vi~~~~~~~~~~~~~~~ga~~~i~~~~-~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 289 (365)
T cd08277 211 RIIGVDINEDKFEKAKEFGATDFINPKD-SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP 289 (365)
T ss_pred eEEEEeCCHHHHHHHHHcCCCcEecccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCC
Confidence 7999999999999999999999988765 112356777777766899999999987778999999977239999999764
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEE
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 336 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 336 (339)
+ ....++...+.. +.++.++..+.+..+.++.++++++.++++++.++++++|+++++++|++.+++++..|+++.
T Consensus 290 ~-~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 290 G-AELSIRPFQLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred c-cccccCHhHHhh-CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 2 233455555554 788888877665545678999999999998888889999999999999999988876688873
No 17
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-41 Score=313.59 Aligned_cols=289 Identities=24% Similarity=0.365 Sum_probs=243.5
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|+++++|++||+|+..+..+|+.|++|+.+.+++|....+ +|...+|
T Consensus 52 ~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G------------- 115 (347)
T PRK10309 52 YYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSRRDG------------- 115 (347)
T ss_pred CCCcccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcce---eccCCCC-------------
Confidence 468999999999999999999999999999999999999999999999999976442 3433344
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
+|+||+.++++.++++|+++++++++.+. ++++++++ .+...++++++|||+|+|++|++++|+|+.+|++.
T Consensus 116 ------~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~ 187 (347)
T PRK10309 116 ------GNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKS 187 (347)
T ss_pred ------ccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence 99999999999999999999999998875 56677886 46678889999999999999999999999999955
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-Ccc-EEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GAD-YCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d-~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
|+++++++++.+.++++|+++++++++ .+ .+.+.+++.+ ++| ++|||+|....+..++++++++ |+++.+|..
T Consensus 188 v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~ 262 (347)
T PRK10309 188 VTAIDINSEKLALAKSLGAMQTFNSRE---MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTL 262 (347)
T ss_pred EEEECCCHHHHHHHHHcCCceEecCcc---cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccC
Confidence 889999999999999999999998776 44 5567777766 898 9999999987799999999997 999999976
Q ss_pred CCCCcccc-cHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535 258 QPGSQLSL-SSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 333 (339)
Q Consensus 258 ~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv 333 (339)
........ .+..++.+++++.+++.+... .+++++++++++++|++++.++++++|+|+++++|++.+.++... |+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKv 342 (347)
T PRK10309 263 HHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKV 342 (347)
T ss_pred CCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEE
Confidence 43211111 223567789999998654321 135788999999999998888999999999999999999888765 99
Q ss_pred EEEe
Q 019535 334 VIWM 337 (339)
Q Consensus 334 vl~~ 337 (339)
++++
T Consensus 343 vv~~ 346 (347)
T PRK10309 343 LLQI 346 (347)
T ss_pred EEeC
Confidence 9876
No 18
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=3.5e-42 Score=307.47 Aligned_cols=270 Identities=20% Similarity=0.330 Sum_probs=224.8
Q ss_pred ccCCceeEEEEEecCCCC------CcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 24 ILGHEAIGVVESVGENVD------GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 24 i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
++|||++|+|+++|++|+ +|++||||++.+..+|+.|.+|+.+++++|.+..+ +|+...+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~----------- 66 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALD----------- 66 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCccccc-----------
Confidence 589999999999999999 89999999999999999999999999999987553 3322100
Q ss_pred eecccccccccceEEeecc-ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535 98 IHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG 176 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G 176 (339)
......|+|+||+++++. .++++|+++++++++.+++++.|+|+++. .....++++|||+|+|++|++++|+|+.+|
T Consensus 67 -~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 67 -SGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred -CCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 000012399999999997 79999999999999999999999999764 455668999999999999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+++|+++++++++.++++++|++.+++..+ ..+.+.+++.+ ++|++||++|.+..++.++++++++ |+++.+|
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G 218 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG 218 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEec
Confidence 955999998999999999999998887644 24566677776 8999999999888899999999997 9999999
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhC--CCCCCcccceeeechhhH
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD--KELELDKFVTHEMKFEEI 318 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~--g~l~~~~~i~~~~~l~~~ 318 (339)
.........+++..++.|++++.++.... .++++++++++.+ +++++.++++++|+|+++
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 219 SVFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred cCCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 75433345677778888999999875332 3579999999987 467777889999999874
No 19
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2.7e-41 Score=314.51 Aligned_cols=296 Identities=23% Similarity=0.294 Sum_probs=232.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCC---CCCCCCCCCcccccccCCc
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK---ISPWMPRDQTSRFKDLRGE 96 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~---~~~g~~~~g~~~~~~~~~~ 96 (339)
.+|.++|||++|+|+++|++|++|++||||++.+...|+.|.+|+.+++++|.+..+. ..+|+...| ..
T Consensus 60 ~~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~-----~~--- 131 (393)
T TIGR02819 60 PTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG-----GW--- 131 (393)
T ss_pred CCCccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC-----CC---
Confidence 5799999999999999999999999999999999999999999999999999864210 002221000 00
Q ss_pred eeecccccccccceEEeecc--ceEEcCCCCCc----cccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHH
Q 019535 97 TIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPP----NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAE 170 (339)
Q Consensus 97 ~~~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~----~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~ 170 (339)
.|+|+||+++++. .++++|++++. .+++.+.+++.|+|+++ ...+++++++|||.|+|++|++++|
T Consensus 132 -------~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiq 203 (393)
T TIGR02819 132 -------VGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAA 203 (393)
T ss_pred -------CCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHH
Confidence 1499999999964 79999998754 34667777999999976 4578999999999989999999999
Q ss_pred HHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCH--------------H
Q 019535 171 GARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA--------------S 235 (339)
Q Consensus 171 la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~--------------~ 235 (339)
+|+.+|++.|+++++++++++.++++|++.+....+ .++.+.+.+++++ ++|++|||+|.+ .
T Consensus 204 lAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~ 280 (393)
T TIGR02819 204 SAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPAT 280 (393)
T ss_pred HHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHH
Confidence 999999955666677888999999999975433333 4677788888877 899999999985 3
Q ss_pred HHHHHHHHhhcCCcEEEEeccCCCCCc-----------ccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCC
Q 019535 236 LVQEAYACCRKGWGKTIVLGVDQPGSQ-----------LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE 304 (339)
Q Consensus 236 ~~~~~~~~l~~~~G~~v~~g~~~~~~~-----------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~ 304 (339)
.++.++++++++ |+++.+|....... ..+.....+.+++++.+.. ....+.+.++++++.+|+++
T Consensus 281 ~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~ 356 (393)
T TIGR02819 281 VLNSLMEVTRVG-GAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQ 356 (393)
T ss_pred HHHHHHHHhhCC-CEEEEeeecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCC
Confidence 699999999998 99999998532111 1233344455566666531 11112346799999999999
Q ss_pred Ccccce-eeechhhHHHHHHHHhcCceeEEEEEeC
Q 019535 305 LDKFVT-HEMKFEEINSAFDLLIKGKCLRCVIWMG 338 (339)
Q Consensus 305 ~~~~i~-~~~~l~~~~~A~~~~~~~~~~kvvl~~~ 338 (339)
+..+++ ++|+|+++++||+.+.++...|++|+++
T Consensus 357 ~~~~i~~~~~~l~~~~~a~~~~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 357 IAKAVNVTVISLDDAPEGYAEFDAGAAKKFVIDPH 391 (393)
T ss_pred HHHceecceecHHHHHHHHHHHhhCCceEEEEeCC
Confidence 887777 7899999999999998887779999874
No 20
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=8.2e-41 Score=307.93 Aligned_cols=287 Identities=24% Similarity=0.384 Sum_probs=244.8
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|++++.+ +||+|++.+..+|+.|..|+.+++++|....+ .|+..+|
T Consensus 51 ~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~G------------ 114 (349)
T TIGR03201 51 HALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKM---PGNDMQG------------ 114 (349)
T ss_pred CCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCc---cCcCCCC------------
Confidence 3679999999999999999999887 99999999999999999999999999976443 3433334
Q ss_pred ecccccccccceEEeeccceEEcCC------CCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHH
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDP------TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 172 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~------~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la 172 (339)
+|+||+.++++.++++|+ ++++++++.+++++.|+|+++. ..+++++++|+|+|+|++|++++|+|
T Consensus 115 -------~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a 186 (349)
T TIGR03201 115 -------GFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTA 186 (349)
T ss_pred -------cccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHH
Confidence 999999999999999999 8999999999999999999764 57889999999999999999999999
Q ss_pred HHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-Ccc----EEEEcCCCHHHHHHHHHHhhcC
Q 019535 173 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GAD----YCFECVGLASLVQEAYACCRKG 247 (339)
Q Consensus 173 ~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d----~v~d~~g~~~~~~~~~~~l~~~ 247 (339)
+.+|+ +|+++++++++.++++++|+++++++.+...+++.+.+++++++ ++| ++|||+|+....+.++++++++
T Consensus 187 ~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~ 265 (349)
T TIGR03201 187 KAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG 265 (349)
T ss_pred HHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC
Confidence 99999 89999999999999999999999987651113567778888877 886 8999999988788999999997
Q ss_pred CcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhc
Q 019535 248 WGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK 327 (339)
Q Consensus 248 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~ 327 (339)
|+++.+|.... ...+++..++.++.++.+.+... .+++.++++++++|++++..++ ++|+|+++++||+.+.+
T Consensus 266 -G~iv~~G~~~~--~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~ 338 (349)
T TIGR03201 266 -GTLVVVGYTMA--KTEYRLSNLMAFHARALGNWGCP---PDRYPAALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHH 338 (349)
T ss_pred -CeEEEECcCCC--CcccCHHHHhhcccEEEEEecCC---HHHHHHHHHHHHcCCCCcccce-EEecHHHHHHHHHHHHc
Confidence 99999997642 23556667777788888875322 3578999999999999877777 47999999999999998
Q ss_pred Ccee-EEEEEe
Q 019535 328 GKCL-RCVIWM 337 (339)
Q Consensus 328 ~~~~-kvvl~~ 337 (339)
+... |+++++
T Consensus 339 ~~~~~k~~~~~ 349 (349)
T TIGR03201 339 HKLKRRAILTP 349 (349)
T ss_pred CCccceEEecC
Confidence 8766 888753
No 21
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=6.8e-41 Score=309.27 Aligned_cols=282 Identities=24% Similarity=0.386 Sum_probs=231.8
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCC-CCC---CCCCCCcccccccC
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFK-ISP---WMPRDQTSRFKDLR 94 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~-~~~---g~~~~g~~~~~~~~ 94 (339)
.+|.++|||++|+|+++|++|++|++||+|++.+. .+|+.|.+|+.+.+++|++..+. ... |...+
T Consensus 65 ~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~--------- 135 (360)
T PLN02586 65 RYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNY--------- 135 (360)
T ss_pred CCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCC---------
Confidence 57999999999999999999999999999986554 48999999999999999865421 000 11122
Q ss_pred CceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHH
Q 019535 95 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 174 (339)
Q Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~ 174 (339)
|+|+||++++++.++++|+++++++++.+++++.|+|+++.....++++++|||.|+|++|++++|+|+.
T Consensus 136 ----------G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~ 205 (360)
T PLN02586 136 ----------GGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKA 205 (360)
T ss_pred ----------CccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHH
Confidence 3999999999999999999999999999999999999987666667889999999999999999999999
Q ss_pred cCCCEEEEEcCChhH-HHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535 175 CGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 253 (339)
Q Consensus 175 ~G~~~Vi~~~~~~~~-~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 253 (339)
+|+ +|++++.++++ .+.++++|++++++..+ . +.+++.++ ++|++||++|....++.++++++++ |+++.
T Consensus 206 ~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~ 276 (360)
T PLN02586 206 FGL-KVTVISSSSNKEDEAINRLGADSFLVSTD---P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLIT 276 (360)
T ss_pred CCC-EEEEEeCCcchhhhHHHhCCCcEEEcCCC---H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEE
Confidence 999 78887766655 45667899999987655 2 24455443 6999999999877789999999997 99999
Q ss_pred eccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-E
Q 019535 254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R 332 (339)
Q Consensus 254 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k 332 (339)
+|... ....+++..++.++..+.++..+. ..++.++++++.+|++++. + ++|+|+++++||+.+.+++.. |
T Consensus 277 vG~~~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gk 348 (360)
T PLN02586 277 LGLPE--KPLELPIFPLVLGRKLVGGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYR 348 (360)
T ss_pred eCCCC--CCCccCHHHHHhCCeEEEEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEE
Confidence 98653 234566667777788877775443 3568999999999988753 4 689999999999999988865 9
Q ss_pred EEEEe
Q 019535 333 CVIWM 337 (339)
Q Consensus 333 vvl~~ 337 (339)
+|+.+
T Consensus 349 vvi~~ 353 (360)
T PLN02586 349 FVIDV 353 (360)
T ss_pred EEEEc
Confidence 99876
No 22
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.4e-40 Score=308.12 Aligned_cols=282 Identities=26% Similarity=0.404 Sum_probs=233.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCC-CCCCCccccCCCCCCCCCCCCCC----CCCCCCCCcccccccC
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKI----SPWMPRDQTSRFKDLR 94 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~c~~~~~~~----~~g~~~~g~~~~~~~~ 94 (339)
.+|.++|||++|+|+++|++|++|++||||++.+.. +|+.|.+|+.+++++|++..+.. ..|...+
T Consensus 59 ~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~--------- 129 (375)
T PLN02178 59 RYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQ--------- 129 (375)
T ss_pred CCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCC---------
Confidence 579999999999999999999999999999876654 69999999999999998754210 0011112
Q ss_pred CceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcC-CCCCCEEEEEccCHHHHHHHHHHH
Q 019535 95 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGAR 173 (339)
Q Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~-~~~~~~VLI~G~G~iG~~a~~la~ 173 (339)
|+|+||++++++.++++|+++++++++.+++++.|+|+++..... .+++++|+|.|+|++|++++|+|+
T Consensus 130 ----------G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak 199 (375)
T PLN02178 130 ----------GGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGK 199 (375)
T ss_pred ----------CccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHH
Confidence 399999999999999999999999999999999999997654432 368999999999999999999999
Q ss_pred HcCCCEEEEEcCChhH-HHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEE
Q 019535 174 LCGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 252 (339)
Q Consensus 174 ~~G~~~Vi~~~~~~~~-~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 252 (339)
.+|+ +|++++.++++ .++++++|+++++++.+ . +.+.+.++ ++|++|||+|.+..++.++++++++ |+++
T Consensus 200 ~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~---~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv 270 (375)
T PLN02178 200 AFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD---S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLV 270 (375)
T ss_pred HcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC---H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEE
Confidence 9999 78888876544 67888999999988654 2 34555543 6999999999987689999999997 9999
Q ss_pred EeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-
Q 019535 253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL- 331 (339)
Q Consensus 253 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~- 331 (339)
.+|... ....+++..++.+++++.++..+. .+++.++++++.+|++++. + ++|+|+++++||+.+.+++..
T Consensus 271 ~vG~~~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~g 342 (375)
T PLN02178 271 ALGLPE--KPLDLPIFPLVLGRKMVGGSQIGG---MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRY 342 (375)
T ss_pred EEccCC--CCCccCHHHHHhCCeEEEEeCccC---HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCce
Confidence 999753 234566777788899999876543 3578999999999988654 4 679999999999999988765
Q ss_pred EEEEEe
Q 019535 332 RCVIWM 337 (339)
Q Consensus 332 kvvl~~ 337 (339)
|+|+.+
T Consensus 343 kvvi~~ 348 (375)
T PLN02178 343 RFVIDV 348 (375)
T ss_pred EEEEEe
Confidence 999886
No 23
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=4e-41 Score=304.45 Aligned_cols=266 Identities=25% Similarity=0.341 Sum_probs=223.2
Q ss_pred CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
..++|+|+|.|++|+|+++|++|++|++||||+..+. .+ .+
T Consensus 54 ~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~~-------------------------~~--~~------------ 94 (326)
T COG0604 54 VRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGG-------------------------VG--RD------------ 94 (326)
T ss_pred CCCCCCcccceeEEEEEEeCCCCCCcCCCCEEEEccC-------------------------CC--CC------------
Confidence 3469999999999999999999999999999975420 00 12
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG 176 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G 176 (339)
|+|+||+.+|++.++++|+++|+++||+++++++|||+++....+++++++|||+|+ |++|++++|||+++|
T Consensus 95 -------G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G 167 (326)
T COG0604 95 -------GGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALG 167 (326)
T ss_pred -------CcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC
Confidence 399999999999999999999999999999999999999999899999999999975 999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+ .++++..++++.++++++|+++++++.+ .++.+++++++++ ++|+|||++|+.. +..++++++++ |+++.+|
T Consensus 168 ~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig 241 (326)
T COG0604 168 A-TVVAVVSSSEKLELLKELGADHVINYRE---EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIG 241 (326)
T ss_pred C-cEEEEecCHHHHHHHHhcCCCEEEcCCc---ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEe
Confidence 8 6666666778777999999999999988 8899999999999 9999999999999 88899999998 9999999
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCC--C-CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhc-Ccee
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGL--K-AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK-GKCL 331 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~-~~~~ 331 (339)
...+.....++...++.+.++..+...... . ..+.+.++.+++.+|++++. ++++||+++..++...... ++..
T Consensus 242 ~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~a~a~~~~~~~~~ 319 (326)
T COG0604 242 ALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLERRTT 319 (326)
T ss_pred cCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHHHHHHHHcccCCc
Confidence 875434555667777878888888765533 1 12346778999999977654 7789999995444443333 3544
Q ss_pred -EEEEEe
Q 019535 332 -RCVIWM 337 (339)
Q Consensus 332 -kvvl~~ 337 (339)
|+||++
T Consensus 320 GKvvl~~ 326 (326)
T COG0604 320 GKVVLKV 326 (326)
T ss_pred ceEEEeC
Confidence 999874
No 24
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=9.3e-40 Score=302.41 Aligned_cols=300 Identities=27% Similarity=0.402 Sum_probs=248.0
Q ss_pred CCCCcccCCceeEEEEEecCCCCC------cCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 019535 19 AVFPRILGHEAIGVVESVGENVDG------VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKD 92 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~------~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~ 92 (339)
..+|.++|||++|+|+++|++|+. |++||+|+..+..+|+.|.+|+.+++++|....+ +|...+-
T Consensus 52 ~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~------ 122 (361)
T cd08231 52 VPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASC------ 122 (361)
T ss_pred CCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchh---ccccccc------
Confidence 467899999999999999999986 9999999999999999999999999999987654 3332110
Q ss_pred cCCceeecccccccccceEEeecc-ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHH
Q 019535 93 LRGETIHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEG 171 (339)
Q Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~l 171 (339)
+ .....|+|+||+.++++ +++++|++++.++++++++++.|||+++.+....+++++|||+|+|.+|++++++
T Consensus 123 --~----~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~l 196 (361)
T cd08231 123 --D----DPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAA 196 (361)
T ss_pred --c----CCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHH
Confidence 0 00012499999999996 8999999999999999989999999988776666689999999989999999999
Q ss_pred HHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcE
Q 019535 172 ARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGK 250 (339)
Q Consensus 172 a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~ 250 (339)
|+.+|+++|+++++++++.++++++|++.++++++....++.+.+.+++++ ++|++|||+|+...++.++++++++ |+
T Consensus 197 ak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~ 275 (361)
T cd08231 197 AKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GT 275 (361)
T ss_pred HHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CE
Confidence 999999779999999999999999999988887651112233577888877 9999999999876689999999997 99
Q ss_pred EEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCC--CCCCcccceeeechhhHHHHHHHHhcC
Q 019535 251 TIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK--ELELDKFVTHEMKFEEINSAFDLLIKG 328 (339)
Q Consensus 251 ~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g--~l~~~~~i~~~~~l~~~~~A~~~~~~~ 328 (339)
++.+|.........++...++.+++++.+++... .+++.++++++.++ ++.+.++++++|+++++++|++.++++
T Consensus 276 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~ 352 (361)
T cd08231 276 YVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESG 352 (361)
T ss_pred EEEEcCCCCCCccccCHHHHhhcccEEEEcccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcC
Confidence 9999975433344566666788899998876432 45788899999887 666777788999999999999999888
Q ss_pred ceeEEEEEe
Q 019535 329 KCLRCVIWM 337 (339)
Q Consensus 329 ~~~kvvl~~ 337 (339)
...|++|++
T Consensus 353 ~~~k~vi~~ 361 (361)
T cd08231 353 TALKVVIDP 361 (361)
T ss_pred CceEEEeCC
Confidence 767999864
No 25
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=2.6e-39 Score=298.29 Aligned_cols=283 Identities=26% Similarity=0.458 Sum_probs=247.5
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCcee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETI 98 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~ 98 (339)
.+|.++|||++|+|+++|++++.|++||+|+..+..+|+.|.+|+.+.+++|....+ +|+. .+
T Consensus 63 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------- 126 (351)
T cd08233 63 TAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGG------------- 126 (351)
T ss_pred CCCceecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCC-------------
Confidence 479999999999999999999999999999998889999999999999999976543 3322 12
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
|+|++|+.++.+.++++|+++++++++.+ .++.|||+++ ...+++++++|||+|+|.+|++++|+|+.+|++
T Consensus 127 ------g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~ 198 (351)
T cd08233 127 ------GGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGAS 198 (351)
T ss_pred ------CceeeEEEechHHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 39999999999999999999999998876 5788999987 778899999999999899999999999999997
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|+++++++++.++++++|++.++++++ .++.+.+++++++ ++|++||++|....++.++++++++ |+++.+|..
T Consensus 199 ~v~~~~~~~~~~~~~~~~ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~ 274 (351)
T cd08233 199 KIIVSEPSEARRELAEELGATIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIW 274 (351)
T ss_pred EEEEECCCHHHHHHHHHhCCCEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccC
Confidence 7899998999999999999999999887 7888889888877 8999999999876699999999997 999999976
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhH-HHHHHHHhcCce--eEEE
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI-NSAFDLLIKGKC--LRCV 334 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~-~~A~~~~~~~~~--~kvv 334 (339)
. ....+++..++.+++++.+..... ++++++++++++++++++.++++++|+++++ ++|++.+.+++. .|++
T Consensus 275 ~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v 349 (351)
T cd08233 275 E--KPISFNPNDLVLKEKTLTGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKIL 349 (351)
T ss_pred C--CCCccCHHHHHhhCcEEEEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEE
Confidence 4 335667777888899998875432 4679999999999999877778899999996 799999988874 5888
Q ss_pred E
Q 019535 335 I 335 (339)
Q Consensus 335 l 335 (339)
|
T Consensus 350 ~ 350 (351)
T cd08233 350 V 350 (351)
T ss_pred e
Confidence 7
No 26
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=6e-39 Score=297.20 Aligned_cols=311 Identities=41% Similarity=0.778 Sum_probs=258.2
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|+.+.+++|.....+-..|...+|+.++.- +|...
T Consensus 51 ~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~ 129 (365)
T cd05279 51 TPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTC-KGKPI 129 (365)
T ss_pred CCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeec-cCCcc
Confidence 35678999999999999999999999999999988889999999999999999876542112322334333331 33334
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
+++.+.|+|++|+.++++.++++|+++++++++.+.+++.+||+++.+.+++.++++|||+|+|++|++++++|+.+|+.
T Consensus 130 ~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~ 209 (365)
T cd05279 130 HHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGAS 209 (365)
T ss_pred ccccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 45555679999999999999999999999999999999999999888888999999999998899999999999999995
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCc--cHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhh-cCCcEEEEec
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK--SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR-KGWGKTIVLG 255 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~--~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~-~~~G~~v~~g 255 (339)
.|+++++++++.+.++++|++++++.++ . ++.+.+.+++++++|++||++|....++.++++++ ++ |+++.+|
T Consensus 210 ~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g 285 (365)
T cd05279 210 RIIAVDINKDKFEKAKQLGATECINPRD---QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVG 285 (365)
T ss_pred eEEEEeCCHHHHHHHHHhCCCeeccccc---ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEe
Confidence 6888888899999999999999988776 4 67777888775599999999997666899999999 97 9999998
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEE
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 335 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl 335 (339)
.........++...+ .++.++.+++.+.+...+.+..+++++.++.+.+.++++++|+++++++|++.+++++..|+++
T Consensus 286 ~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~ 364 (365)
T cd05279 286 VPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTIL 364 (365)
T ss_pred cCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 753233455666666 5678888877666656678899999999998877667789999999999999998877778776
No 27
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.8e-39 Score=296.32 Aligned_cols=272 Identities=21% Similarity=0.254 Sum_probs=230.9
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
.+|.++|||++|+|+++|+++++|++||+|++.+. .+|+.|.+|+.+.+++|.+..+ +|+..+|
T Consensus 55 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G------------ 119 (329)
T TIGR02822 55 RPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWDTDG------------ 119 (329)
T ss_pred CCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcccCC------------
Confidence 34799999999999999999999999999987654 4799999999999999987654 4544444
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
+|+||+.++++.++++|+++++++++.+++++.|||+++ ..++++++++|||+|+|++|++++|+|+..|+
T Consensus 120 -------~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~- 190 (329)
T TIGR02822 120 -------GYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA- 190 (329)
T ss_pred -------cceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-
Confidence 999999999999999999999999999999999999987 45789999999999999999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
+|++++++++++++++++|++++++..+ .. .+++|+++++.+....++.++++++++ |+++.+|...
T Consensus 191 ~vi~~~~~~~~~~~a~~~Ga~~vi~~~~---~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~ 257 (329)
T TIGR02822 191 TVHVMTRGAAARRLALALGAASAGGAYD---TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHL 257 (329)
T ss_pred eEEEEeCChHHHHHHHHhCCceeccccc---cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccC
Confidence 8999999999999999999999987543 11 126899999888777899999999997 9999999743
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 335 (339)
.. ...++...++.+++++.+++.. .++++.++++++.+++++ +++++|+|+++++||+.+.+++.. |+||
T Consensus 258 ~~-~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 258 TD-TPPLNYQRHLFYERQIRSVTSN---TRADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred cc-CCCCCHHHHhhCCcEEEEeecC---CHHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 22 2245556667788998887533 235688899999999875 357999999999999999988876 8887
No 28
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=2.1e-38 Score=294.17 Aligned_cols=314 Identities=43% Similarity=0.778 Sum_probs=247.8
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|+.+.++.|+........|...++..++. .+|....
T Consensus 59 ~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 137 (373)
T cd08299 59 PFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFT-CKGKPIH 137 (373)
T ss_pred CCCccccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccc-cCCcccc
Confidence 578999999999999999999999999999988888999999999999999986542100121111111110 1111122
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
++.+.|+|+||++++++.++++|+++++++++.+++++.|||+++...++++++++|||+|+|++|++++++|+..|+++
T Consensus 138 ~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~ 217 (373)
T cd08299 138 HFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASR 217 (373)
T ss_pred cccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence 22235699999999999999999999999999999999999998888889999999999998999999999999999867
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHh-hcCCcEEEEeccCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC-RKGWGKTIVLGVDQ 258 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~ 258 (339)
|+++++++++.+.++++|++++++..+. ..++.+.+.+++.+++|++|||+|.+..+..++..+ +++ |+++.+|...
T Consensus 218 Vi~~~~~~~~~~~a~~lGa~~~i~~~~~-~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~ 295 (373)
T cd08299 218 IIAVDINKDKFAKAKELGATECINPQDY-KKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPP 295 (373)
T ss_pred EEEEcCCHHHHHHHHHcCCceEeccccc-chhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCC
Confidence 9999999999999999999999887640 123667777776668999999999866677767655 566 9999999764
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 337 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 337 (339)
......+....+ .++.++.++..+.+..++++.++++.+.++.+++.++++++|+++++.+|++.+.+++..|+++.+
T Consensus 296 ~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 296 SSQNLSINPMLL-LTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred CCceeecCHHHH-hcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 322344444333 457888888776655456677888888888777777788999999999999999887767888763
No 29
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=8.6e-39 Score=295.19 Aligned_cols=282 Identities=26% Similarity=0.372 Sum_probs=222.4
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCcee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETI 98 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~ 98 (339)
.+|.++|||++|+|+++|++ ++|++||||+..+..+|+.|.+|+.+++++|....+. ..|.. .+
T Consensus 56 ~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~------------- 120 (355)
T cd08230 56 EDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH------------- 120 (355)
T ss_pred CCCeeeccccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC-------------
Confidence 57899999999999999999 9999999999888889999999999999999865421 11211 12
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHH------hcCCCCCCEEEEEccCHHHHHHHHHH
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR------TANVEVGSTVVIFGLGSIGLAVAEGA 172 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~------~~~~~~~~~VLI~G~G~iG~~a~~la 172 (339)
|+|+||++++++.++++|++++ +++ .+..++++++.++.. ..+++++++|||+|+|++|++++|+|
T Consensus 121 ------G~~aey~~~~~~~~~~~P~~~~-~~a-~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~a 192 (355)
T cd08230 121 ------GFMREYFVDDPEYLVKVPPSLA-DVG-VLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLL 192 (355)
T ss_pred ------ccceeEEEeccccEEECCCCCC-cce-eecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHH
Confidence 3999999999999999999998 444 344466666554322 22356899999999999999999999
Q ss_pred HHcCCCEEEEEcC---ChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCc
Q 019535 173 RLCGATRIIGVDV---ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG 249 (339)
Q Consensus 173 ~~~G~~~Vi~~~~---~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G 249 (339)
+++|+ +|+++++ ++++++.++++|++. +++.+ +++.+ .+ ..+++|+||||+|.+..++.++++++++ |
T Consensus 193 k~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~---~~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G 263 (355)
T cd08230 193 RLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK---TPVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-G 263 (355)
T ss_pred HHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc---cchhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-c
Confidence 99999 8999987 678999999999986 46555 44433 21 2238999999999887789999999997 9
Q ss_pred EEEEeccCCCCCccccc----HHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCC----CCcccceeeechhhHHHH
Q 019535 250 KTIVLGVDQPGSQLSLS----SFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKEL----ELDKFVTHEMKFEEINSA 321 (339)
Q Consensus 250 ~~v~~g~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l----~~~~~i~~~~~l~~~~~A 321 (339)
+++.+|...+.....++ ...++.|++++.|+.... ++++.++++++.++.+ .+.++++++|+++++.+|
T Consensus 264 ~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a 340 (355)
T cd08230 264 VVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEA 340 (355)
T ss_pred EEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHH
Confidence 99999976542334444 345677899999875433 4578889999988762 356678999999999999
Q ss_pred HHHHhcCceeEEEEEe
Q 019535 322 FDLLIKGKCLRCVIWM 337 (339)
Q Consensus 322 ~~~~~~~~~~kvvl~~ 337 (339)
|+.++++. .|++|.+
T Consensus 341 ~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 341 LTEKPDGE-IKVVIEW 355 (355)
T ss_pred HHhcccCC-eEEEeeC
Confidence 99886543 5999874
No 30
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=7.8e-38 Score=288.77 Aligned_cols=286 Identities=23% Similarity=0.355 Sum_probs=231.9
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCC-CCCCCccccCCCCCCCCCCCCCCCCCC-CCCCcccccccCCce
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGET 97 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~ 97 (339)
.+|.++|||++|+|+++|+++++|++||+|++.+.. .|+.|.+|+.+.+++|....+. ++. ...|
T Consensus 62 ~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~--~~~~~~~g----------- 128 (357)
T PLN02514 62 NYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWS--YNDVYTDG----------- 128 (357)
T ss_pred CCCccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCcccc--ccccccCC-----------
Confidence 579999999999999999999999999999865543 6999999999999999865321 000 0001
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 177 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~ 177 (339)
....|+|+||++++...++++|+++++++++.+++++.|||+++......+++++|+|+|+|++|++++|+|+.+|+
T Consensus 129 ---~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~ 205 (357)
T PLN02514 129 ---KPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH 205 (357)
T ss_pred ---ccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC
Confidence 00124999999999999999999999999999999999999987665666789999999999999999999999999
Q ss_pred CEEEEEcCChhHHHHH-HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 178 TRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+|+++++++++.+.+ +++|++.+++..+ . +.+.+.+. ++|++|||+|....++.++++++++ |+++.+|.
T Consensus 206 -~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~ 276 (357)
T PLN02514 206 -HVTVISSSDKKREEALEHLGADDYLVSSD---A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGV 276 (357)
T ss_pred -eEEEEeCCHHHHHHHHHhcCCcEEecCCC---h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECC
Confidence 788888777766554 6699988776544 2 23444433 6999999999876689999999997 99999997
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 335 (339)
... ...++...++.++.++.++..+. ..++.++++++.+|++. +++ ++|+|+++.+||+.++++... |+++
T Consensus 277 ~~~--~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~ 348 (357)
T PLN02514 277 INT--PLQFVTPMLMLGRKVITGSFIGS---MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVV 348 (357)
T ss_pred CCC--CCcccHHHHhhCCcEEEEEecCC---HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEE
Confidence 632 34566667778899999986544 35789999999999764 445 689999999999999998876 9999
Q ss_pred EeC
Q 019535 336 WMG 338 (339)
Q Consensus 336 ~~~ 338 (339)
+++
T Consensus 349 ~~~ 351 (357)
T PLN02514 349 DVA 351 (357)
T ss_pred Ecc
Confidence 875
No 31
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1e-38 Score=264.30 Aligned_cols=263 Identities=22% Similarity=0.291 Sum_probs=227.3
Q ss_pred CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
..++|++||-|.+|+|+++|++|+++++||||+....
T Consensus 61 ~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl~~------------------------------------------- 97 (336)
T KOG1197|consen 61 PAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYLNP------------------------------------------- 97 (336)
T ss_pred CCCCCcCCCcccceEEEEecCCccccccccEEEEecc-------------------------------------------
Confidence 4578999999999999999999999999999963211
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEc-cCHHHHHHHHHHHHcC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGARLCG 176 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G-~G~iG~~a~~la~~~G 176 (339)
.|.|+|+..+|...++++|+.+++++||++...+.|||..+.+..++++|++||++. +|++|+++.|++|..|
T Consensus 98 ------~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~ 171 (336)
T KOG1197|consen 98 ------FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVG 171 (336)
T ss_pred ------chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcC
Confidence 139999999999999999999999999999999999999899999999999999996 4999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+ .+|++.+++++++.+++.|+.+.|+++. +|+.++++++++| |+|+++|.+|... +...+.+|++. |.+|.+|
T Consensus 172 a-~tI~~asTaeK~~~akenG~~h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG 245 (336)
T KOG1197|consen 172 A-HTIATASTAEKHEIAKENGAEHPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFG 245 (336)
T ss_pred c-EEEEEeccHHHHHHHHhcCCcceeeccc---hhHHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEec
Confidence 9 9999999999999999999999999999 9999999999988 9999999999988 99999999997 9999999
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeee-cCCCCCCCcH----HHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSL-FGGLKAKSDI----PILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC 330 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~----~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~ 330 (339)
...+ ..-++++..+..+.+++.... ++-...+.+| .+++.++.+|.+++. |.++|||+++.+|+..+++...
T Consensus 246 ~asg-l~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrkt 322 (336)
T KOG1197|consen 246 NASG-LIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKT 322 (336)
T ss_pred cccC-CCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhc
Confidence 8643 334455555666666665443 3333333333 467778888977665 8999999999999999999887
Q ss_pred e-EEEEEeC
Q 019535 331 L-RCVIWMG 338 (339)
Q Consensus 331 ~-kvvl~~~ 338 (339)
. |+++.+.
T Consensus 323 vGkvlLlp~ 331 (336)
T KOG1197|consen 323 VGKVLLLPG 331 (336)
T ss_pred cceEEEeCC
Confidence 6 9998764
No 32
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=2.5e-37 Score=286.42 Aligned_cols=312 Identities=33% Similarity=0.570 Sum_probs=247.3
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce-
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET- 97 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~- 97 (339)
..+|.++|||++|+|+++|++++.|++||+|++.+. .|+.|.+|+.+.+++|.........|...+|.....+..|-.
T Consensus 53 ~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (365)
T cd08278 53 TPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPV 131 (365)
T ss_pred CCCCcccccceeEEEEEeCCCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCccc
Confidence 357889999999999999999999999999998764 899999999999999975432111121111100000000000
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 177 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~ 177 (339)
-.++++.|+|++|+.++++.++++|+++++++++.+++++.||+.++.+...++++++|||+|+|.+|++++|+|+.+|+
T Consensus 132 ~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~ 211 (365)
T cd08278 132 HGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGC 211 (365)
T ss_pred ccccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 00123346999999999999999999999999999999999999988888889999999999889999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+.++++++++++.+.++++|++.++++++ .++.+.+.+++++++|+++||+|.+..+..++++++++ |+++.+|..
T Consensus 212 ~~v~~~~~~~~k~~~~~~~g~~~~i~~~~---~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~ 287 (365)
T cd08278 212 TTIIAVDIVDSRLELAKELGATHVINPKE---EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAP 287 (365)
T ss_pred CeEEEEeCCHHHHHHHHHcCCcEEecCCC---cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcC
Confidence 77999999999999999999999998877 67888888887339999999999876689999999997 999999875
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEE
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 336 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 336 (339)
.......+++..++.++.++.++........+.+.++++++.++.+.+..++ ..|+++++++|++.++++...|++|.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 288 PPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred CCCCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 3223345666666677899888765433334557889999999988553444 68999999999999988877788873
No 33
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=7.8e-37 Score=281.80 Aligned_cols=293 Identities=27% Similarity=0.360 Sum_probs=238.7
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
.++|.++|||++|+|+++|++++++++||+|+..+..+|+.|..|..++++.|........++...+
T Consensus 51 ~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~------------- 117 (351)
T cd08285 51 ERHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKD------------- 117 (351)
T ss_pred CCCCcccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCC-------------
Confidence 3568999999999999999999999999999988778999999999999999975421100111122
Q ss_pred ecccccccccceEEeecc--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535 99 HHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG 176 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G 176 (339)
|+|+||+.++.+ .++++|+++++++++.++.++.||+++ .+..+++++++|||+|+|++|++++|+|+.+|
T Consensus 118 ------g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G 190 (351)
T cd08285 118 ------GVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRG 190 (351)
T ss_pred ------cceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 399999999974 899999999999999998899999997 47788999999999988999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
++.|+++++++++.+.++++|+++++++++ .++.+.+.+++.+ ++|++||++|+...+..++++++++ |+++.+|
T Consensus 191 ~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g 266 (351)
T cd08285 191 AGRIIAVGSRPNRVELAKEYGATDIVDYKN---GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVN 266 (351)
T ss_pred CCeEEEEeCCHHHHHHHHHcCCceEecCCC---CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEec
Confidence 966899999999999999999999998877 6788888888776 8999999999877789999999997 9999998
Q ss_pred cCCCCCcccccH--HHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCccc-ceeeechhhHHHHHHHHhcCce--
Q 019535 256 VDQPGSQLSLSS--FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKF-VTHEMKFEEINSAFDLLIKGKC-- 330 (339)
Q Consensus 256 ~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~-i~~~~~l~~~~~A~~~~~~~~~-- 330 (339)
.........++. .....+..++.+... ....+++.++++++.+|++.+..+ +.++++++++++|++.+.+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~ 344 (351)
T cd08285 267 YYGEDDYLPIPREEWGVGMGHKTINGGLC--PGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDL 344 (351)
T ss_pred ccCCCceeecChhhhhhhccccEEEEeec--CCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCe
Confidence 764322233332 222234555554321 112467899999999999887443 4456999999999999988863
Q ss_pred eEEEEEe
Q 019535 331 LRCVIWM 337 (339)
Q Consensus 331 ~kvvl~~ 337 (339)
.|++|++
T Consensus 345 ~k~~~~~ 351 (351)
T cd08285 345 IKPVIIF 351 (351)
T ss_pred EEEEEeC
Confidence 5999874
No 34
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.8e-36 Score=278.09 Aligned_cols=284 Identities=19% Similarity=0.395 Sum_probs=235.2
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
++|.++|||++|+|+++|++|+.+++||+|++.+..+|+.|.+|..+++++|.+..+ +++..+|
T Consensus 52 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 115 (339)
T PRK10083 52 KYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVHRDG------------- 115 (339)
T ss_pred CCCcccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCce---EEEccCC-------------
Confidence 579999999999999999999999999999999999999999999999999975542 2322233
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHH-cCCC
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGAT 178 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~-~G~~ 178 (339)
+|+||+.++.+.++++|++++++.++ +..++.++++ +....+++++++|+|+|+|++|++++|+|+. +|++
T Consensus 116 ------~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~ 187 (339)
T PRK10083 116 ------GFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVK 187 (339)
T ss_pred ------cceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999998876 4457888886 5677889999999999999999999999996 5996
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
.++++++++++.+.++++|++.++++++ .++.+.+.. .+ ++|++||++|.+..+..++++++++ |+++.+|..
T Consensus 188 ~v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~ 261 (339)
T PRK10083 188 AVIVADRIDERLALAKESGADWVINNAQ---EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFS 261 (339)
T ss_pred EEEEEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccC
Confidence 6888888899999999999999998876 566666643 23 5789999999876799999999997 999999875
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc-e-eEEEE
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-C-LRCVI 335 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~-~-~kvvl 335 (339)
.. ...+....+..+++++.+... ..+.++++++++.++++.+..+++++|+++++++|++.+.++. . .|+++
T Consensus 262 ~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv 335 (339)
T PRK10083 262 SE--PSEIVQQGITGKELSIFSSRL----NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLL 335 (339)
T ss_pred CC--CceecHHHHhhcceEEEEEec----ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEE
Confidence 32 233344445567777776542 2457899999999998876555779999999999999998653 3 49999
Q ss_pred EeCC
Q 019535 336 WMGE 339 (339)
Q Consensus 336 ~~~~ 339 (339)
+++|
T Consensus 336 ~~~~ 339 (339)
T PRK10083 336 TFAE 339 (339)
T ss_pred ecCC
Confidence 9875
No 35
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=2.8e-36 Score=276.17 Aligned_cols=279 Identities=23% Similarity=0.384 Sum_probs=238.2
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeecc-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
.+|.++|||++|+|+++|+++++|++||+|++.+ ...|+.|.+|+.++++.|....+ .|+..+|
T Consensus 53 ~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~g------------ 117 (333)
T cd08296 53 SYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDG------------ 117 (333)
T ss_pred CCCcccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCc---cCcccCC------------
Confidence 5688999999999999999999999999998744 56899999999999999987653 4443334
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
++++|+.++.+.++++|+++++++++.+++++.|||+++.. .++.++++|||+|+|++|++++++|+.+|+
T Consensus 118 -------~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~- 188 (333)
T cd08296 118 -------GYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF- 188 (333)
T ss_pred -------cceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-
Confidence 99999999999999999999999999999999999998754 589999999999999999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
+|+++++++++.+.++++|+++++++.+ .++.+.+.++ +++|++||+.|.+..++.++++++++ |+++.+|...
T Consensus 189 ~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 262 (333)
T cd08296 189 RTVAISRGSDKADLARKLGAHHYIDTSK---EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG 262 (333)
T ss_pred eEEEEeCChHHHHHHHHcCCcEEecCCC---ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC
Confidence 8999999999999999999999998877 6677777665 36999999998666699999999997 9999999764
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 336 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 336 (339)
...+++...++.+++++.+...+. ..++..+++++.++++.. ++ ++|+++++.+|++.+++++.. |+|++
T Consensus 263 --~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 263 --EPVAVSPLQLIMGRKSIHGWPSGT---ALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred --CCCCcCHHHHhhcccEEEEeCcCC---HHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 334566666778899999876332 356788888888886653 35 689999999999999988875 98874
No 36
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=7.2e-37 Score=280.61 Aligned_cols=272 Identities=22% Similarity=0.233 Sum_probs=211.4
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|.+ +|++||||++.+..+|+ |..| ...++|....+ +|...+|
T Consensus 56 ~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~~~G------------ 115 (341)
T cd08237 56 KKLPMALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF---RSSGYDG------------ 115 (341)
T ss_pred CCCCeeccceeEEEEEeeCCC--ccCCCCEEEECCCCCch-hccc--chhccCCCcce---eEecCCC------------
Confidence 368999999999999998864 79999999988877777 4455 45678875543 3333344
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHH--hcCCCCCCEEEEEccCHHHHHHHHHHHH-c
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGLGSIGLAVAEGARL-C 175 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~--~~~~~~~~~VLI~G~G~iG~~a~~la~~-~ 175 (339)
+|+||+++|++.++++|+++++++|+++. +++++|+++.. .+.++++++|||+|+|++|++++|+++. .
T Consensus 116 -------~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~ 187 (341)
T cd08237 116 -------FMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIY 187 (341)
T ss_pred -------ceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999887665 88999997654 2456889999999999999999999986 6
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCC---HHHHHHHHHHhhcCCcEE
Q 019535 176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL---ASLVQEAYACCRKGWGKT 251 (339)
Q Consensus 176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~ 251 (339)
|..+|+++++++++++++++.++...++ ++ ... ++|+|||++|+ +..++.++++++++ |++
T Consensus 188 g~~~vi~~~~~~~k~~~a~~~~~~~~~~-------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~i 252 (341)
T cd08237 188 PESKLVVFGKHQEKLDLFSFADETYLID-------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTI 252 (341)
T ss_pred CCCcEEEEeCcHhHHHHHhhcCceeehh-------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEE
Confidence 6558999999999999998766543221 11 123 69999999994 45689999999997 999
Q ss_pred EEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCC---CCCCcccceeeechh---hHHHHHHHH
Q 019535 252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK---ELELDKFVTHEMKFE---EINSAFDLL 325 (339)
Q Consensus 252 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g---~l~~~~~i~~~~~l~---~~~~A~~~~ 325 (339)
+.+|... ....+++..++.|++++.++.... .++++++++++.++ +..+.++++++|+++ ++.+|++..
T Consensus 253 v~~G~~~--~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~ 327 (341)
T cd08237 253 GLMGVSE--YPVPINTRMVLEKGLTLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESD 327 (341)
T ss_pred EEEeecC--CCcccCHHHHhhCceEEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHH
Confidence 9999753 234566677788899999875432 35789999999998 346778899999986 455555555
Q ss_pred hcCceeEEEEEeC
Q 019535 326 IKGKCLRCVIWMG 338 (339)
Q Consensus 326 ~~~~~~kvvl~~~ 338 (339)
.++...|+||+++
T Consensus 328 ~~~~~gKvvi~~~ 340 (341)
T cd08237 328 LTNSWGKTVMEWE 340 (341)
T ss_pred hhcCcceEEEEee
Confidence 4443459999875
No 37
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=5.4e-36 Score=281.30 Aligned_cols=279 Identities=19% Similarity=0.207 Sum_probs=223.8
Q ss_pred CCCcccCCceeEEEEEecCCCC-CcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 20 VFPRILGHEAIGVVESVGENVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
.+|+++|||++|+|+++|++|+ +|++||||++.+...|+.|..|.. +|+..+|
T Consensus 61 ~~p~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~~~G------------ 114 (410)
T cd08238 61 KEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYTYPG------------ 114 (410)
T ss_pred CCCceeccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCC--------------ccccCCC------------
Confidence 4799999999999999999998 699999999988888998887721 2222334
Q ss_pred ecccccccccceEEeecc----ceEEcCCCCCccccccccchhh---hhhHHH--------HHhcCCCCCCEEEEEcc-C
Q 019535 99 HHFVSVSSFSEYTVLDIA----HVVKVDPTVPPNRACLLSCGVS---TGVGAA--------WRTANVEVGSTVVIFGL-G 162 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~----~~~~lp~~~~~~~aa~l~~~~~---ta~~al--------~~~~~~~~~~~VLI~G~-G 162 (339)
+|+||++++++ .++++|+++++++++++. ++. +++.++ .+.++++++++|+|+|+ |
T Consensus 115 -------~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G 186 (410)
T cd08238 115 -------GLATYHIIPNEVMEQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAG 186 (410)
T ss_pred -------cceEEEEecHHhccCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCC
Confidence 99999999987 589999999999988652 221 233322 24567899999999975 9
Q ss_pred HHHHHHHHHHHHcC--CCEEEEEcCChhHHHHHHhc--------CCc-eEEeCCCCCCccHHHHHHHhcCC-CccEEEEc
Q 019535 163 SIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKRF--------GVT-EFVNSKNCGDKSVSQIIIDMTDG-GADYCFEC 230 (339)
Q Consensus 163 ~iG~~a~~la~~~G--~~~Vi~~~~~~~~~~~~~~~--------ga~-~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~ 230 (339)
++|++++|+|+.+| +.+|+++++++++++.++++ |++ .++++.+ ..++.+.+++++++ ++|++||+
T Consensus 187 ~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~ 264 (410)
T cd08238 187 PMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVF 264 (410)
T ss_pred HHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEc
Confidence 99999999999975 45799999999999999987 665 5676543 14678888888888 99999999
Q ss_pred CCCHHHHHHHHHHhhcCCcEEEEeccCCC-CCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccc
Q 019535 231 VGLASLVQEAYACCRKGWGKTIVLGVDQP-GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFV 309 (339)
Q Consensus 231 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i 309 (339)
+|.+..++.++++++++ |+++.++.... .....+++..++.+++++.++..+. +++++++++++.+|++++..++
T Consensus 265 ~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~i 340 (410)
T cd08238 265 VPVPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMV 340 (410)
T ss_pred CCCHHHHHHHHHHhccC-CeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcE
Confidence 99888899999999997 98887754321 1234566777888899999876432 3578999999999999998899
Q ss_pred eeeechhhHHHHHHHHhcCceeEEEEEeC
Q 019535 310 THEMKFEEINSAFDLLIKGKCLRCVIWMG 338 (339)
Q Consensus 310 ~~~~~l~~~~~A~~~~~~~~~~kvvl~~~ 338 (339)
+++|+|+++++|++.+..+...|+||.++
T Consensus 341 t~~~~l~~~~~A~~~~~~~~~gKvvl~~~ 369 (410)
T cd08238 341 THIGGLNAAAETTLNLPGIPGGKKLIYTQ 369 (410)
T ss_pred EEEecHHHHHHHHHHhhccCCceEEEECC
Confidence 99999999999999998333449999864
No 38
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1e-35 Score=273.08 Aligned_cols=283 Identities=28% Similarity=0.457 Sum_probs=242.4
Q ss_pred CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
+..+|.++|||++|+|+++|+++..|++||+|+..+...|+.|..|+.+.+++|....+ .|+..+|
T Consensus 54 ~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g----------- 119 (340)
T cd05284 54 PYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDG----------- 119 (340)
T ss_pred cCCCCeecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCccCCC-----------
Confidence 44678999999999999999999999999999998888999999999999999998775 5554445
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHh-cCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCG 176 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~-~~~~~~~~VLI~G~G~iG~~a~~la~~~G 176 (339)
+|++|+.++++.++++|+++++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++++|+.+|
T Consensus 120 --------~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g 191 (340)
T cd05284 120 --------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALT 191 (340)
T ss_pred --------cceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999987765 46788999999999889999999999999
Q ss_pred -CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 177 -ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 177 -~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
. +|+++++++++.+.++++|+++++++++ . +.+++.+++.+ ++|+++|++|+....+.++++++++ |+++.+
T Consensus 192 ~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~ 265 (340)
T cd05284 192 PA-TVIAVDRSEEALKLAERLGADHVLNASD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIV 265 (340)
T ss_pred CC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEE
Confidence 6 8999998999999999999999998877 5 77888888877 8999999999866689999999997 999999
Q ss_pred ccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535 255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 333 (339)
Q Consensus 255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv 333 (339)
|.... ..++....+.+++++.+.... ..+.+..+++++.++.+.+ ..+.|+++++++|++.++++... |+
T Consensus 266 g~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkv 336 (340)
T cd05284 266 GYGGH---GRLPTSDLVPTEISVIGSLWG---TRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRA 336 (340)
T ss_pred cCCCC---CccCHHHhhhcceEEEEEecc---cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceE
Confidence 86532 333444445678888876533 2456888999999998764 23789999999999999988766 88
Q ss_pred EEEe
Q 019535 334 VIWM 337 (339)
Q Consensus 334 vl~~ 337 (339)
++.+
T Consensus 337 v~~~ 340 (340)
T cd05284 337 VLVP 340 (340)
T ss_pred EecC
Confidence 8753
No 39
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=2.1e-35 Score=273.44 Aligned_cols=311 Identities=43% Similarity=0.721 Sum_probs=248.9
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|++++.|++||+|+..+..+|++|.+|+++..+.|...... -.|...++.-++. ..|...
T Consensus 51 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~ 128 (363)
T cd08279 51 APLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQLPDGTRRFT-ADGEPV 128 (363)
T ss_pred CCCCccccccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccc-cccccCCCccccc-ccCccc
Confidence 35678999999999999999999999999999999999999999999999999754210 0000000000000 000000
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
...++.|+|++|+.++++.++++|+++++++++.+++++.|||.++.+..++.++++|||+|+|.+|++++++|+..|++
T Consensus 129 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~ 208 (363)
T cd08279 129 GAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGAS 208 (363)
T ss_pred cccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 01123459999999999999999999999999999999999999888888999999999998899999999999999995
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|+++++++++.+.++++|++++++.+. .++...+.+++.+ ++|++||++++...+..++++++++ |+++.+|..
T Consensus 209 ~Vi~~~~~~~~~~~~~~~g~~~vv~~~~---~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~ 284 (363)
T cd08279 209 RIIAVDPVPEKLELARRFGATHTVNASE---DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMG 284 (363)
T ss_pred cEEEEcCCHHHHHHHHHhCCeEEeCCCC---ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecC
Confidence 5999999999999999999999998877 6788888888766 8999999999776689999999997 999999865
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEE
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 335 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl 335 (339)
.......+....+..++..+.++.++....++.++++++++.++.+.+..++.++|+++++.+|++.+.+++..|.||
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 285 PPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred CCCcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 422344566666666677777776554444567889999999998876555678999999999999998887766554
No 40
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.6e-35 Score=272.44 Aligned_cols=287 Identities=30% Similarity=0.438 Sum_probs=244.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
++|.++|||++|+|+++|++++++++||+|+..+...|+.|.+|..+.++.|....+. .|...+|
T Consensus 53 ~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g------------- 117 (345)
T cd08286 53 TPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNLIDG------------- 117 (345)
T ss_pred CCCceecccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccc--cccccCC-------------
Confidence 4588999999999999999999999999999998889999999999999999866542 2323334
Q ss_pred cccccccccceEEeecc--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535 100 HFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 177 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~ 177 (339)
+|++|+.++.+ .++++|++++..+++.++++++|||.++....++.++++|||.|+|++|.+++|+|+.+|+
T Consensus 118 ------~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~ 191 (345)
T cd08286 118 ------TQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSP 191 (345)
T ss_pred ------eeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 99999999987 8999999999999999999999999977778889999999999889999999999999994
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
.+|+++++++++.+.++++|++.++++++ .++.+.+.+++.+ ++|++|||++....++.++++++++ |+++.+|.
T Consensus 192 ~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~ 267 (345)
T cd08286 192 SKIIMVDLDDNRLEVAKKLGATHTVNSAK---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGV 267 (345)
T ss_pred CeEEEEcCCHHHHHHHHHhCCCceecccc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecc
Confidence 38999988888999999999999999877 6777888888777 8999999999877789999999997 99999986
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC---ceeEE
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG---KCLRC 333 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~---~~~kv 333 (339)
.. ....+++..++.+++++.+.... .+.+..++++++++.+.+.++++++|+++++++|++.+.+. ...|+
T Consensus 268 ~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~ 341 (345)
T cd08286 268 HG--KPVDLHLEKLWIKNITITTGLVD----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKV 341 (345)
T ss_pred cC--CCCCcCHHHHhhcCcEEEeecCc----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEE
Confidence 53 23455666667788888765322 14578889999999887766677999999999999999876 34599
Q ss_pred EEEe
Q 019535 334 VIWM 337 (339)
Q Consensus 334 vl~~ 337 (339)
+|++
T Consensus 342 ~~~~ 345 (345)
T cd08286 342 IIDF 345 (345)
T ss_pred EEeC
Confidence 9975
No 41
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.2e-35 Score=275.23 Aligned_cols=303 Identities=28% Similarity=0.400 Sum_probs=241.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCC-C---CCCCCCCcccccccCC
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-S---PWMPRDQTSRFKDLRG 95 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~---~g~~~~g~~~~~~~~~ 95 (339)
++|.++|||++|+|+++|++++++++||+|+..+..+||.|++|+.+.+++|++....- . +|....| .+ |
T Consensus 53 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~ 126 (386)
T cd08283 53 KKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAG--IF----G 126 (386)
T ss_pred CCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCccccccccccccccccc--cc----c
Confidence 56899999999999999999999999999999888899999999999999998654210 0 0000000 00 0
Q ss_pred ceeecccccccccceEEeecc--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHH
Q 019535 96 ETIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR 173 (339)
Q Consensus 96 ~~~~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~ 173 (339)
.+-......|+|++|++++++ .++++|+++++++++.++++++|||+++ +.+++.++++|||+|+|.+|.+++++|+
T Consensus 127 ~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~ 205 (386)
T cd08283 127 YSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAK 205 (386)
T ss_pred cccccCCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHH
Confidence 000000013599999999988 8999999999999999999999999987 7788999999999988999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCc-cHHHHHHHhcCC-CccEEEEcCCCH-----------------
Q 019535 174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK-SVSQIIIDMTDG-GADYCFECVGLA----------------- 234 (339)
Q Consensus 174 ~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~-~~~~~l~~~~~g-~~d~v~d~~g~~----------------- 234 (339)
..|+++|+++++++++.+.+++++...++++.. . ++.+.+.+++.+ ++|++||++|+.
T Consensus 206 ~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~ 282 (386)
T cd08283 206 LLGAERVIAIDRVPERLEMARSHLGAETINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLE 282 (386)
T ss_pred HcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccc
Confidence 999856999999999999999984446777665 4 478888888877 899999999752
Q ss_pred ----HHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccce
Q 019535 235 ----SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVT 310 (339)
Q Consensus 235 ----~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~ 310 (339)
..++.++++++++ |+++.+|..... ...++...++.+++++.+.... ..+.+.++++++.++++.+..+++
T Consensus 283 ~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~ 357 (386)
T cd08283 283 TDRPDALREAIQAVRKG-GTVSIIGVYGGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIIT 357 (386)
T ss_pred cCchHHHHHHHHHhccC-CEEEEEcCCCCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceE
Confidence 3588999999997 999999875432 3344554567788888876422 245688899999999887766677
Q ss_pred eeechhhHHHHHHHHhcCc-e-eEEEEEe
Q 019535 311 HEMKFEEINSAFDLLIKGK-C-LRCVIWM 337 (339)
Q Consensus 311 ~~~~l~~~~~A~~~~~~~~-~-~kvvl~~ 337 (339)
++|+++++.+|++.+.++. . .|++|++
T Consensus 358 ~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 358 HRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred EEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 8999999999999998876 3 4999863
No 42
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=4.9e-35 Score=272.82 Aligned_cols=289 Identities=23% Similarity=0.357 Sum_probs=236.3
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|++++.|++||+|+..+..+|+.|+.|..+++++|..... .|+..+|
T Consensus 85 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~g------------ 149 (384)
T cd08265 85 TEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSADG------------ 149 (384)
T ss_pred cCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeecCCC------------
Confidence 4578999999999999999999999999999999999999999999999999986553 4443344
Q ss_pred ecccccccccceEEeeccceEEcCCCC-------CccccccccchhhhhhHHHHHh-cCCCCCCEEEEEccCHHHHHHHH
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTV-------PPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAE 170 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~-------~~~~aa~l~~~~~ta~~al~~~-~~~~~~~~VLI~G~G~iG~~a~~ 170 (339)
+|++|+.++++.++++|+++ +.+ +++++.++++||+++... .+++++++|||+|+|++|+++++
T Consensus 150 -------~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~ 221 (384)
T cd08265 150 -------AFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIA 221 (384)
T ss_pred -------cceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHH
Confidence 99999999999999999864 444 555666899999987665 68999999999988999999999
Q ss_pred HHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCH-HHHHHHHHHhhcCC
Q 019535 171 GARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA-SLVQEAYACCRKGW 248 (339)
Q Consensus 171 la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~-~~~~~~~~~l~~~~ 248 (339)
+|+.+|+.+|+++++++++.+.++++|+++++++++....++.+.+.+++.+ ++|+++|++|++ ..+..++++++++
T Consensus 222 lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~- 300 (384)
T cd08265 222 LAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN- 300 (384)
T ss_pred HHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-
Confidence 9999998679999988889999999999999887751113678888888887 999999999973 4588999999997
Q ss_pred cEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC
Q 019535 249 GKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG 328 (339)
Q Consensus 249 G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~ 328 (339)
|+++.+|.... ...+....+..+..++.+..... ....+.++++++.++.+.+..+++++|+++++.+|++.+.++
T Consensus 301 G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~ 376 (384)
T cd08265 301 GKIVYIGRAAT--TVPLHLEVLQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER 376 (384)
T ss_pred CEEEEECCCCC--CCcccHHHHhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC
Confidence 99999986532 23444455556677777664211 234688999999999887655577899999999999997666
Q ss_pred ceeEEEE
Q 019535 329 KCLRCVI 335 (339)
Q Consensus 329 ~~~kvvl 335 (339)
...|+++
T Consensus 377 ~~~kvvv 383 (384)
T cd08265 377 TDGKITI 383 (384)
T ss_pred CCceEEe
Confidence 5447775
No 43
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=5.8e-35 Score=269.26 Aligned_cols=284 Identities=27% Similarity=0.426 Sum_probs=236.5
Q ss_pred CCCcccCCceeEEEEEecCCCC--CcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 20 VFPRILGHEAIGVVESVGENVD--GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~--~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
++|.++|||++|+|+++|++|+ +|++||+|+..+..+|+.|..|+.+..+.|.... .+|+...
T Consensus 61 ~~p~~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~------------ 125 (350)
T cd08256 61 KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD---LYGFQNN------------ 125 (350)
T ss_pred CCCcccCcceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc---ceeeccC------------
Confidence 5788999999999999999999 8999999999999999999999999999997543 2444210
Q ss_pred eecccccccccceEEeecc-ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535 98 IHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG 176 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G 176 (339)
..|+|++|+.++++ .++++|+++++++++.+ .++.|+|+++ +..++.++++|||.|+|.+|++++++|+++|
T Consensus 126 -----~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G 198 (350)
T cd08256 126 -----VNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKN 198 (350)
T ss_pred -----CCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 12499999999988 67899999999999988 7999999986 7788999999999778999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
++.++++++++++.+.++++|++++++.+. .++.+++.+++++ ++|++||++|+...+..++++++++ |+++.+|
T Consensus 199 ~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g 274 (350)
T cd08256 199 PKKLIVLDLKDERLALARKFGADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFS 274 (350)
T ss_pred CcEEEEEcCCHHHHHHHHHcCCcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEc
Confidence 867888888899999999999998988776 6788888888877 8999999999765688999999997 9999998
Q ss_pred cCCCCCcccccHHHH-hhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535 256 VDQPGSQLSLSSFEV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 333 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv 333 (339)
..... ..+....+ ..+++++.++.... ..+.++++++.++.+.+..++.++|+++++.+|++.++++... |+
T Consensus 275 ~~~~~--~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kv 348 (350)
T cd08256 275 VFGDP--VTVDWSIIGDRKELDVLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKV 348 (350)
T ss_pred cCCCC--CccChhHhhcccccEEEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEE
Confidence 65322 22333333 24567777664332 3688899999999887655567999999999999999887755 77
Q ss_pred EE
Q 019535 334 VI 335 (339)
Q Consensus 334 vl 335 (339)
++
T Consensus 349 v~ 350 (350)
T cd08256 349 VL 350 (350)
T ss_pred eC
Confidence 64
No 44
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=5.3e-35 Score=269.08 Aligned_cols=290 Identities=30% Similarity=0.439 Sum_probs=237.3
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
.++|.++|||++|+|+++|++++++++||+|+..+..+||.|.+|..+..+.|+........+..
T Consensus 52 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 116 (347)
T cd05278 52 AKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNR--------------- 116 (347)
T ss_pred CCCCceeccceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccC---------------
Confidence 46689999999999999999999999999999989999999999999999999764421001111
Q ss_pred ecccccccccceEEeecc--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC
Q 019535 99 HHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG 176 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G 176 (339)
+.|+|++|++++++ +++++|+++++++++.+++++.|||+++ ...+++++++|||.|+|.+|++++|+|+.+|
T Consensus 117 ----~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g 191 (347)
T cd05278 117 ----IDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLG 191 (347)
T ss_pred ----CCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 12499999999987 9999999999999999999999999986 6788999999999888999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
..+++++++++++.+.++++|++.++++++ .++.+.+++++.+ ++|++||++++...+..++++++++ |+++.+|
T Consensus 192 ~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g 267 (347)
T cd05278 192 AARIIAVDSNPERLDLAKEAGATDIINPKN---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVG 267 (347)
T ss_pred CCEEEEEeCCHHHHHHHHHhCCcEEEcCCc---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEc
Confidence 657888888888889999999999998887 6788888888776 9999999999865689999999997 9999998
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce-e-EE
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-L-RC 333 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~-kv 333 (339)
........... ...+.+++++.+.... ..+.++++++++.++.+.+..++...|+++++++|++.+..+.. . |+
T Consensus 268 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 343 (347)
T cd05278 268 VYGKPDPLPLL-GEWFGKNLTFKTGLVP---VRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKV 343 (347)
T ss_pred CCCCCcccCcc-chhhhceeEEEeeccC---chhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEE
Confidence 65322111111 1223557776665322 24578889999999988765556688999999999999887765 4 88
Q ss_pred EEE
Q 019535 334 VIW 336 (339)
Q Consensus 334 vl~ 336 (339)
+++
T Consensus 344 vv~ 346 (347)
T cd05278 344 VIR 346 (347)
T ss_pred Eec
Confidence 875
No 45
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.2e-34 Score=266.39 Aligned_cols=282 Identities=29% Similarity=0.489 Sum_probs=236.0
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCcccccccCCcee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETI 98 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~ 98 (339)
.+|.++|+|++|+|+++|+++++|++||+|+..+..+|+.|.+|+.+.+++|.+..+ .+. ...
T Consensus 53 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------- 116 (343)
T cd05285 53 KEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRF---AATPPVD------------- 116 (343)
T ss_pred CCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccc---cccccCC-------------
Confidence 468899999999999999999999999999988899999999999999999986542 111 112
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
|+|++|++++++.++++|+++++++++.+ .++.+|++++ +.++++++++|||.|+|.+|++++|+|+.+|++
T Consensus 117 ------g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~ 188 (343)
T cd05285 117 ------GTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGAT 188 (343)
T ss_pred ------CceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence 39999999999999999999999999877 4889999975 788999999999998899999999999999994
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccH---HHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSV---SQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~---~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
.|+++.+++++.++++++|++.++++++ .++ .+.+.+.+.+ ++|++|||+|+...++..+++++++ |+++.+
T Consensus 189 ~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~ 264 (343)
T cd05285 189 KVVVTDIDPSRLEFAKELGATHTVNVRT---EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLV 264 (343)
T ss_pred EEEEECCCHHHHHHHHHcCCcEEecccc---ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEE
Confidence 4899988899999999999999998876 443 7778887777 8999999999875689999999997 999999
Q ss_pred ccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc--eeE
Q 019535 255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLR 332 (339)
Q Consensus 255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~--~~k 332 (339)
|.... ...+++..+..+++++.+.... .+.+..+++++.++.+.+.+.+.++|+++++.+|++.+.++. ..|
T Consensus 265 g~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k 338 (343)
T cd05285 265 GMGKP--EVTLPLSAASLREIDIRGVFRY----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIK 338 (343)
T ss_pred ccCCC--CCccCHHHHhhCCcEEEEeccC----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeE
Confidence 86432 2344455566677887765422 256888999999998765555678999999999999998875 359
Q ss_pred EEE
Q 019535 333 CVI 335 (339)
Q Consensus 333 vvl 335 (339)
++|
T Consensus 339 ~~~ 341 (343)
T cd05285 339 VVI 341 (343)
T ss_pred EEE
Confidence 987
No 46
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=8.6e-35 Score=272.13 Aligned_cols=284 Identities=19% Similarity=0.246 Sum_probs=235.0
Q ss_pred cccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccc
Q 019535 23 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV 102 (339)
Q Consensus 23 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~ 102 (339)
.++|||++|+|+++|++++.+++||+|+..+...|+.|..|+.+..++|....+ +|+...
T Consensus 83 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~----------------- 142 (393)
T cd08246 83 HIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETN----------------- 142 (393)
T ss_pred cccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCC-----------------
Confidence 589999999999999999999999999999999999999999999999986654 554311
Q ss_pred ccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHh--cCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 019535 103 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR 179 (339)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~--~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~ 179 (339)
.|+|++|+.++...++++|+++++++++.+++++.|||+++... ++++++++|+|+|+ |++|++++++|+.+|+ +
T Consensus 143 -~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~ 220 (393)
T cd08246 143 -YGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-N 220 (393)
T ss_pred -CCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-e
Confidence 13999999999999999999999999999999999999987654 67889999999997 9999999999999999 7
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCC-------------------CccHHHHHHHhcCC--CccEEEEcCCCHHHHH
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG--GADYCFECVGLASLVQ 238 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~-------------------~~~~~~~l~~~~~g--~~d~v~d~~g~~~~~~ 238 (339)
++++++++++.+.++++|+++++++++.. ...+.+.+.+++++ ++|++|||+|+.. ++
T Consensus 221 vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~ 299 (393)
T cd08246 221 PVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FP 299 (393)
T ss_pred EEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HH
Confidence 88888899999999999999999875410 01245677777765 7999999999855 88
Q ss_pred HHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhH
Q 019535 239 EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318 (339)
Q Consensus 239 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~ 318 (339)
.++++++++ |+++.+|.... ....++...+..++.++.++.... .+.+.+++++++++.+.+ .++++|+++++
T Consensus 300 ~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~ 372 (393)
T cd08246 300 TSVFVCDRG-GMVVICAGTTG-YNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDET 372 (393)
T ss_pred HHHHHhccC-CEEEEEcccCC-CCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHH
Confidence 999999997 99999986532 223445556667788887765433 246888999999997763 36789999999
Q ss_pred HHHHHHHhcC-cee-EEEEE
Q 019535 319 NSAFDLLIKG-KCL-RCVIW 336 (339)
Q Consensus 319 ~~A~~~~~~~-~~~-kvvl~ 336 (339)
++|++.+.++ ... |+++-
T Consensus 373 ~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 373 PDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred HHHHHHHHhCccccceEEEe
Confidence 9999999887 555 77763
No 47
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.4e-34 Score=268.39 Aligned_cols=310 Identities=30% Similarity=0.471 Sum_probs=246.6
Q ss_pred CCCcccCCceeEEEEEecCCCCC---cCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCC-CCCCCcccccccCC
Q 019535 20 VFPRILGHEAIGVVESVGENVDG---VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPRDQTSRFKDLRG 95 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~---~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g-~~~~g~~~~~~~~~ 95 (339)
.+|.++|||++|+|+++|+++++ |++||+|+..+..+|+.|.+|..+++++|+...++...+ -.++|....-+..+
T Consensus 52 ~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (367)
T cd08263 52 PPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDG 131 (367)
T ss_pred CCCcccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCC
Confidence 67889999999999999999988 999999999888899999999999999998765310000 01111000000000
Q ss_pred ceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHc
Q 019535 96 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLC 175 (339)
Q Consensus 96 ~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~ 175 (339)
+-++-...|++++|+.++.+.++++|+++++.+++.+++++.|||+++.+...+.++++|||+|+|.+|++++++|+.+
T Consensus 132 -~~~~~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~ 210 (367)
T cd08263 132 -GPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAF 210 (367)
T ss_pred -CccccccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHc
Confidence 0000012359999999999999999999999999999999999999888888888999999998899999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
|++++++++.++++.+.++++|++.+++.+. .++.+++.+.+++ ++|++||++++....+.++++++++ |+++.+
T Consensus 211 G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~ 286 (367)
T cd08263 211 GASPIIAVDVRDEKLAKAKELGATHTVNAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVV 286 (367)
T ss_pred CCCeEEEEeCCHHHHHHHHHhCCceEecCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEE
Confidence 9944999988999999999999999999877 6788888888776 9999999999874589999999997 999999
Q ss_pred ccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535 255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 333 (339)
Q Consensus 255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv 333 (339)
+.........++...++.+++++.++.... .++.++++++++.++.+.+..++++.++++++.+|++.++++... |+
T Consensus 287 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ 364 (367)
T cd08263 287 GLAPGGATAEIPITRLVRRGIKIIGSYGAR--PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRA 364 (367)
T ss_pred ccCCCCCccccCHHHHhhCCeEEEecCCCC--cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCcccee
Confidence 865332234455566656788877753211 135688899999999887655567899999999999999888765 88
Q ss_pred EEE
Q 019535 334 VIW 336 (339)
Q Consensus 334 vl~ 336 (339)
||.
T Consensus 365 ~~~ 367 (367)
T cd08263 365 IVE 367 (367)
T ss_pred eeC
Confidence 863
No 48
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=3.4e-34 Score=263.57 Aligned_cols=288 Identities=27% Similarity=0.401 Sum_probs=241.9
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|+|++|.|+++|++++.|++||+|+..+..+|++|.+|..+..++|.+..+ .|+..+|
T Consensus 53 ~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 116 (345)
T cd08260 53 TLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHPG------------- 116 (345)
T ss_pred CCCeeeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcc---cccCCCC-------------
Confidence 568899999999999999999999999999887778999999999999999987642 3333333
Q ss_pred cccccccccceEEeecc--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535 100 HFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 177 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~ 177 (339)
+|++|+++++. +++++|+++++++++.+++++.|||+++.+..++.++++|+|+|+|.+|++++++|+..|+
T Consensus 117 ------~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~ 190 (345)
T cd08260 117 ------SFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA 190 (345)
T ss_pred ------cceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 99999999975 8999999999999999999999999988778889999999999999999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|+++.+++++.+.++++|++.+++.++ ..++.+.+.++..+++|++|||+|+.......+++++++ |+++.+|..
T Consensus 191 -~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~ 266 (345)
T cd08260 191 -RVIAVDIDDDKLELARELGAVATVNASE--VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLT 266 (345)
T ss_pred -eEEEEeCCHHHHHHHHHhCCCEEEcccc--chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCc
Confidence 8999999999999999999988888653 235667777776558999999999766688999999997 999999875
Q ss_pred CCCCc-ccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535 258 QPGSQ-LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335 (339)
Q Consensus 258 ~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 335 (339)
..... ..++...+..+++++.+.... ..+.++.+++++.++++.+..++.+.++++++++|++.++++... |+|+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 343 (345)
T cd08260 267 LGEEAGVALPMDRVVARELEIVGSHGM---PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVI 343 (345)
T ss_pred CCCCCccccCHHHHhhcccEEEeCCcC---CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEe
Confidence 43221 345555566778888876532 245788899999999887655567899999999999999887766 7775
Q ss_pred E
Q 019535 336 W 336 (339)
Q Consensus 336 ~ 336 (339)
+
T Consensus 344 ~ 344 (345)
T cd08260 344 T 344 (345)
T ss_pred c
Confidence 3
No 49
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=6e-34 Score=263.82 Aligned_cols=286 Identities=27% Similarity=0.455 Sum_probs=230.6
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|+++++|++||+|+..+..+|+.|..|+.+.+++|+...+ ++...
T Consensus 72 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~--------------- 133 (364)
T PLN02702 72 KEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPP--------------- 133 (364)
T ss_pred CCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCC---------------
Confidence 368899999999999999999999999999999999999999999999999975332 22110
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
..|+|++|+.++.+.++++|++++++++++.. ++.++++++ ...++.++++|||+|+|++|++++++|+.+|++.
T Consensus 134 ---~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~ 208 (364)
T PLN02702 134 ---VHGSLANQVVHPADLCFKLPENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPR 208 (364)
T ss_pred ---CCCcccceEEcchHHeEECCCCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 02399999999999999999999999887632 455677765 7788999999999998999999999999999966
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHh---cCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM---TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~---~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
++++++++++.+.++++|++.++++.. ...++.+.+.++ .++++|++||++|++..+..++++++++ |+++.+|.
T Consensus 209 v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~ 286 (364)
T PLN02702 209 IVIVDVDDERLSVAKQLGADEIVLVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGM 286 (364)
T ss_pred EEEECCCHHHHHHHHHhCCCEEEecCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcc
Confidence 888888888999999999988776532 114566666554 2338999999999776799999999997 99999986
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeech--hhHHHHHHHHhcCcee-EE
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF--EEINSAFDLLIKGKCL-RC 333 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-kv 333 (339)
... ...+....+..+++++.+++.. ...+..++++++++++.+.++++++|++ +++++|++.+.++... |+
T Consensus 287 ~~~--~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kv 360 (364)
T PLN02702 287 GHN--EMTVPLTPAAAREVDVVGVFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKV 360 (364)
T ss_pred CCC--CCcccHHHHHhCccEEEEeccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEE
Confidence 532 2334555667778888876432 2468889999999988766667788655 8999999998877655 98
Q ss_pred EEE
Q 019535 334 VIW 336 (339)
Q Consensus 334 vl~ 336 (339)
++.
T Consensus 361 v~~ 363 (364)
T PLN02702 361 MFN 363 (364)
T ss_pred EEe
Confidence 885
No 50
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=6.2e-35 Score=264.13 Aligned_cols=251 Identities=18% Similarity=0.207 Sum_probs=196.6
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|+++ +|++||||+.. |..|..|. .| .+
T Consensus 57 ~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~----~~~c~~~~---------------~~--~~-------------- 100 (308)
T TIGR01202 57 GYPLVPGYESVGRVVEAGPDT-GFRPGDRVFVP----GSNCYEDV---------------RG--LF-------------- 100 (308)
T ss_pred CCCccCcceeEEEEEEecCCC-CCCCCCEEEEe----Cccccccc---------------cc--cC--------------
Confidence 679999999999999999998 69999999863 22333321 11 11
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
|+|+||++++++.++++|++++++. ++++ ++.|||+++.. . ..+++++||+|+|++|++++|+|+++|++.
T Consensus 101 -----G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~ 171 (308)
T TIGR01202 101 -----GGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSP 171 (308)
T ss_pred -----CcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCce
Confidence 3999999999999999999999864 5555 57899997754 3 336889999999999999999999999955
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 259 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 259 (339)
|++++.++++++.++.+ .++|+.+ . .+.++|++|||+|+...++.++++++++ |+++.+|....
T Consensus 172 v~~~~~~~~rl~~a~~~---~~i~~~~---~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~ 235 (308)
T TIGR01202 172 PAVWETNPRRRDGATGY---EVLDPEK---D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTE 235 (308)
T ss_pred EEEeCCCHHHHHhhhhc---cccChhh---c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCC
Confidence 77777777776655543 4454432 1 1238999999999987789999999997 99999997532
Q ss_pred CCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce-eEEEEE
Q 019535 260 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 336 (339)
Q Consensus 260 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvl~ 336 (339)
...+++..++.|++++.++... .+++++++++++.+|++++.++++++|+|+++++||+.+.++.. .|++|+
T Consensus 236 --~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 236 --PVNFDFVPAFMKEARLRIAAEW---QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred --CcccccchhhhcceEEEEeccc---chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 3455556677788888876432 24579999999999999988889999999999999998776554 499874
No 51
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=5.1e-34 Score=262.94 Aligned_cols=285 Identities=26% Similarity=0.362 Sum_probs=238.5
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|++++.+++||+|+..+...|+.|.+|.++.+++|....+ .|....
T Consensus 64 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------- 127 (350)
T cd08240 64 VKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIFQD------------- 127 (350)
T ss_pred CCCCcccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeeecc-------------
Confidence 3567899999999999999999999999999999999999999999999999976532 232222
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
|++++|+.++.+.++++|+++++.+++.+.+++.|||+++.+...+.++++|||+|+|++|++++|+|+.+|++
T Consensus 128 ------g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~ 201 (350)
T cd08240 128 ------GGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPA 201 (350)
T ss_pred ------CcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCC
Confidence 39999999999999999999999999999999999999887766667899999998899999999999999997
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
+|+++++++++.+.++++|++.+++.++ .++.+.+.+..++++|++||++|.+..+..++++|+++ |+++.+|...
T Consensus 202 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~ 277 (350)
T cd08240 202 NIIVVDIDEAKLEAAKAAGADVVVNGSD---PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFG 277 (350)
T ss_pred eEEEEeCCHHHHHHHHHhCCcEEecCCC---ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCC
Confidence 7889988999999999999988888776 66777777776558999999999766799999999997 9999998754
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 336 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 336 (339)
... ..+......++.++.+..... .+++.+++++++++.+.+. ....|+++++++|++.+.++... |++++
T Consensus 278 ~~~--~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 278 GEA--TLPLPLLPLRALTIQGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred CCC--cccHHHHhhcCcEEEEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 322 233333445788887765433 2568889999999977643 45789999999999999887765 88875
No 52
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.1e-33 Score=259.33 Aligned_cols=283 Identities=30% Similarity=0.538 Sum_probs=236.7
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|+|++|+|+++|++++.|++||+|+..+..+|+.|..|+.++.|+|..... .++...
T Consensus 52 ~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------- 114 (337)
T cd08261 52 SYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQV---LGVHRD-------------- 114 (337)
T ss_pred CCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCe---eeecCC--------------
Confidence 458899999999999999999999999999988888999999999999999953321 222212
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
|+|++|+.++++ ++++|+++++++++++ ..+.++++++ +..++.++++|||+|+|.+|.+++|+|+.+|+ +
T Consensus 115 -----g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~ 185 (337)
T cd08261 115 -----GGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-R 185 (337)
T ss_pred -----CcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-e
Confidence 399999999999 9999999999999877 4788888866 77889999999999889999999999999999 8
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+++.+++++.++++++|+++++++.+ .++.+.+.+++.+ ++|++|||+|+...+..++++++++ |+++.+|...
T Consensus 186 v~~~~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~ 261 (337)
T cd08261 186 VIVVDIDDERLEFARELGADDTINVGD---EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK 261 (337)
T ss_pred EEEECCCHHHHHHHHHhCCCEEecCcc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC
Confidence 999988999999999999999999887 6788888888877 8999999998876689999999997 9999998653
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc-ee-EEEEE
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-CL-RCVIW 336 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~-~~-kvvl~ 336 (339)
....++...+..+++++.+.. ....+.++.+++++.++.+.+.+.+..+++++++.+|++.+.+++ .. |+|++
T Consensus 262 --~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~ 336 (337)
T cd08261 262 --GPVTFPDPEFHKKELTILGSR---NATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIE 336 (337)
T ss_pred --CCCccCHHHHHhCCCEEEEec---cCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEe
Confidence 223444455666778777653 223456888999999998876334668999999999999998873 54 99986
Q ss_pred e
Q 019535 337 M 337 (339)
Q Consensus 337 ~ 337 (339)
+
T Consensus 337 ~ 337 (337)
T cd08261 337 F 337 (337)
T ss_pred C
Confidence 4
No 53
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=8.7e-34 Score=259.89 Aligned_cols=284 Identities=31% Similarity=0.482 Sum_probs=242.3
Q ss_pred CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
+.++|.++|+|++|+|+++|++++.+++||+|+..+..+|+.|.+|+.++.++|....+ .|+..+|
T Consensus 53 ~~~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g----------- 118 (338)
T cd08254 53 LTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLGIDG----------- 118 (338)
T ss_pred cCCCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccccCC-----------
Confidence 34568899999999999999999999999999999999999999999999999966543 4444444
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 177 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~ 177 (339)
+|++|+.++.+.++++|+++++++++.++.++.|||+++.....+.++++|||.|+|.+|++++++|+..|+
T Consensus 119 --------~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~ 190 (338)
T cd08254 119 --------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA 190 (338)
T ss_pred --------cceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999988888889999999999889999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+|+++++++++.+.++++|++++++..+ ....+.+ +...+ ++|+++||++.....+.++++++++ |+++.+|.
T Consensus 191 -~V~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~ 264 (338)
T cd08254 191 -AVIAVDIKEEKLELAKELGADEVLNSLD---DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGL 264 (338)
T ss_pred -EEEEEcCCHHHHHHHHHhCCCEEEcCCC---cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECC
Confidence 8999999999999999999988888776 5666666 55555 9999999999877799999999997 99999986
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 335 (339)
.. ....++...+..++.++.++... ..+.+..++++++++.+.+. .+.++++++.++++.+.++... |+++
T Consensus 265 ~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~ 336 (338)
T cd08254 265 GR--DKLTVDLSDLIARELRIIGSFGG---TPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVL 336 (338)
T ss_pred CC--CCCccCHHHHhhCccEEEEeccC---CHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEE
Confidence 53 22345556677788888876432 24568889999999987754 4789999999999999888766 9888
Q ss_pred Ee
Q 019535 336 WM 337 (339)
Q Consensus 336 ~~ 337 (339)
++
T Consensus 337 ~~ 338 (338)
T cd08254 337 VP 338 (338)
T ss_pred eC
Confidence 64
No 54
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=8.2e-34 Score=260.90 Aligned_cols=289 Identities=28% Similarity=0.401 Sum_probs=237.0
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|..++.+.|++... +|...-
T Consensus 52 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------- 114 (344)
T cd08284 52 TPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGL---FGYAGS-------------- 114 (344)
T ss_pred CCCcccccceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCcc---cccccc--------------
Confidence 457899999999999999999999999999988889999999999999999987543 221100
Q ss_pred cccccccccceEEeecc--ceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535 100 HFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 177 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~ 177 (339)
....|+|++|+.++++ .++++|+++++++++.++++++|||+++.. .++.++++|||+|+|.+|++++++|+.+|+
T Consensus 115 -~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~ 192 (344)
T cd08284 115 -PNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGA 192 (344)
T ss_pred -CCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCC
Confidence 0012499999999865 999999999999999999999999998754 788899999999889999999999999997
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
.+|+++++++++.+.++++|+. +++.+. .++...+.+++.+ ++|++||++++...+..++++++++ |+++.+|.
T Consensus 193 ~~v~~~~~~~~~~~~~~~~g~~-~~~~~~---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~ 267 (344)
T cd08284 193 ARVFAVDPVPERLERAAALGAE-PINFED---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGV 267 (344)
T ss_pred ceEEEEcCCHHHHHHHHHhCCe-EEecCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECc
Confidence 5789998888899999999975 466665 5778888888876 9999999999877799999999997 99999987
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEE
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 336 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 336 (339)
... ..........+.+++++.+.. ....+.+..+++++.++.+.+..+++++++++++.+|++.+.++...|+|+.
T Consensus 268 ~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 268 HTA-EEFPFPGLDAYNKNLTLRFGR---CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred CCC-CCccccHHHHhhcCcEEEEec---CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 542 223344455566788876542 2235678999999999988765556789999999999998877655788874
No 55
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=8.8e-34 Score=260.84 Aligned_cols=286 Identities=28% Similarity=0.419 Sum_probs=236.5
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
..|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|+.+..+.|....+ .|...+|
T Consensus 52 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 115 (345)
T cd08287 52 RAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAFVDG------------- 115 (345)
T ss_pred CCCcccccceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCc---ccCCCCC-------------
Confidence 348899999999999999999999999999876677899999999999999986543 3433444
Q ss_pred cccccccccceEEeecc--ceEEcCCCCCccccc-----cccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHH
Q 019535 100 HFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRAC-----LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 172 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~~aa-----~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la 172 (339)
+|++|+.++.+ .++++|++++++.+. .+.+.+.||++++ ..+++.++++|+|.|+|++|++++|+|
T Consensus 116 ------~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~la 188 (345)
T cd08287 116 ------GQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAA 188 (345)
T ss_pred ------ceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence 99999999975 999999999983222 1225788899876 467889999999998899999999999
Q ss_pred HHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEE
Q 019535 173 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKT 251 (339)
Q Consensus 173 ~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~ 251 (339)
+..|++.++++++++++.+.++++|++.++++.. .++.+.+.+.+.+ ++|+++|++|++..++.++++++++ |++
T Consensus 189 k~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~ 264 (345)
T cd08287 189 KRLGAERIIAMSRHEDRQALAREFGATDIVAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRV 264 (345)
T ss_pred HHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEE
Confidence 9999966889988888889999999999999887 6788888888877 9999999999877799999999997 999
Q ss_pred EEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535 252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 331 (339)
Q Consensus 252 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~ 331 (339)
+.+|.... ...+++...+.+++++.+.... ..+.+.++++++.++.+.+..+++++++++++++|++.+.+....
T Consensus 265 v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~ 339 (345)
T cd08287 265 GYVGVPHG--GVELDVRELFFRNVGLAGGPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI 339 (345)
T ss_pred EEecccCC--CCccCHHHHHhcceEEEEecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce
Confidence 99986542 3345554556778888775322 235688999999999887765567999999999999998877667
Q ss_pred EEEEEe
Q 019535 332 RCVIWM 337 (339)
Q Consensus 332 kvvl~~ 337 (339)
|++|++
T Consensus 340 k~~~~~ 345 (345)
T cd08287 340 KVLLRP 345 (345)
T ss_pred EEEeCC
Confidence 999863
No 56
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.3e-34 Score=263.51 Aligned_cols=260 Identities=20% Similarity=0.268 Sum_probs=214.9
Q ss_pred CCCcccCC--ceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 20 VFPRILGH--EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 20 ~~P~i~G~--e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
..|.++|+ |++|+|..+|+++++|++||+|+..
T Consensus 71 ~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~--------------------------------------------- 105 (348)
T PLN03154 71 LPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI--------------------------------------------- 105 (348)
T ss_pred CCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec---------------------------------------------
Confidence 46899998 8899999999999999999999421
Q ss_pred eecccccccccceEEeeccc--eEE--cCCCCCcc-ccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHH
Q 019535 98 IHHFVSVSSFSEYTVLDIAH--VVK--VDPTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEG 171 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~--~~~--lp~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~l 171 (339)
|+|+||++++... +.+ +|++++++ +++.+++++.|||+++.+..+++++++|||+|+ |++|++++|+
T Consensus 106 -------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiql 178 (348)
T PLN03154 106 -------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQL 178 (348)
T ss_pred -------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHH
Confidence 2899999998753 544 59999986 688899999999999888889999999999987 9999999999
Q ss_pred HHHcCCCEEEEEcCChhHHHHHH-hcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcE
Q 019535 172 ARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 250 (339)
Q Consensus 172 a~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~ 250 (339)
|+.+|+ +|+++++++++.++++ ++|+++++++++ ..++.+.+++.+++++|++|||+|+.. ++.++++++++ |+
T Consensus 179 Ak~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvD~v~d~vG~~~-~~~~~~~l~~~-G~ 253 (348)
T PLN03154 179 AKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPEGIDIYFDNVGGDM-LDAALLNMKIH-GR 253 (348)
T ss_pred HHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHHhccC-CE
Confidence 999999 8999999999999987 799999999864 136777888877568999999999865 89999999997 99
Q ss_pred EEEeccCCCCCc----ccccHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHH
Q 019535 251 TIVLGVDQPGSQ----LSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL 324 (339)
Q Consensus 251 ~v~~g~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~ 324 (339)
++.+|....... ..++...++.+++++.++....+. ..+.+.++++++.+|++++. ++.+|+|+++++|++.
T Consensus 254 iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~ 331 (348)
T PLN03154 254 IAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVG 331 (348)
T ss_pred EEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHH
Confidence 999997532211 012455677789999887644321 12357789999999988653 6678999999999999
Q ss_pred HhcCcee-EEEEEeC
Q 019535 325 LIKGKCL-RCVIWMG 338 (339)
Q Consensus 325 ~~~~~~~-kvvl~~~ 338 (339)
+++++.. |+||++.
T Consensus 332 l~~g~~~GKvVl~~~ 346 (348)
T PLN03154 332 LFSGKNVGKQVIRVA 346 (348)
T ss_pred HHcCCCCceEEEEec
Confidence 9998876 9999875
No 57
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=8.7e-34 Score=260.65 Aligned_cols=285 Identities=28% Similarity=0.427 Sum_probs=239.4
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
..|.++|+|++|+|+++|++++.|++||+|+..++..|+.|+.|..++.++|....+ .|....|
T Consensus 52 ~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 115 (343)
T cd08235 52 KPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNLYDG------------- 115 (343)
T ss_pred CCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcce---eccCCCC-------------
Confidence 458899999999999999999999999999999999999999999999999976543 3333333
Q ss_pred cccccccccceEEeeccc-----eEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHH
Q 019535 100 HFVSVSSFSEYTVLDIAH-----VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 174 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~-----~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~ 174 (339)
+|++|+.++++. ++++|+++++++++.+ +++.+||+++. ..++.++++|||+|+|.+|++++|+|+.
T Consensus 116 ------~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~ 187 (343)
T cd08235 116 ------GFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKA 187 (343)
T ss_pred ------cceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 999999999998 9999999999998876 68899999774 4589999999999889999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535 175 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIV 253 (339)
Q Consensus 175 ~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 253 (339)
.|.+.|+++++++++.+.++++|.++++++++ .++.+.+.+.+.+ ++|++|||+++.......+++++++ |+++.
T Consensus 188 ~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~ 263 (343)
T cd08235 188 SGARKVIVSDLNEFRLEFAKKLGADYTIDAAE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILF 263 (343)
T ss_pred cCCcEEEEECCCHHHHHHHHHhCCcEEecCCc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEE
Confidence 99933899988999999998899999998887 7888888888877 8999999999876689999999997 99999
Q ss_pred eccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-E
Q 019535 254 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R 332 (339)
Q Consensus 254 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k 332 (339)
++.........++...+..+++.+.++... ..+.++.+++++.++.+.+...+..+|+++++.+|++.+.++. . |
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k 339 (343)
T cd08235 264 FGGLPKGSTVNIDPNLIHYREITITGSYAA---SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLK 339 (343)
T ss_pred EeccCCCCCcccCHHHHhhCceEEEEEecC---ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEE
Confidence 986543333444555566677877765432 2356888999999998865444668899999999999998888 6 8
Q ss_pred EEEE
Q 019535 333 CVIW 336 (339)
Q Consensus 333 vvl~ 336 (339)
+|+.
T Consensus 340 ~vi~ 343 (343)
T cd08235 340 IVIT 343 (343)
T ss_pred EEeC
Confidence 8863
No 58
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=1.2e-33 Score=259.47 Aligned_cols=285 Identities=24% Similarity=0.381 Sum_probs=233.6
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|..+.+++|....+ .++..+|
T Consensus 56 ~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 119 (341)
T PRK05396 56 PVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRPG------------- 119 (341)
T ss_pred CCCcccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeecCCC-------------
Confidence 578899999999999999999999999999988889999999999999999976432 3333334
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
+|++|+.++.+.++++|+++++++++.+ .++.++++++.. ...++++|+|.|+|++|++++|+|+.+|+++
T Consensus 120 ------~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~ 190 (341)
T PRK05396 120 ------AFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARH 190 (341)
T ss_pred ------cceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCE
Confidence 9999999999999999999999888755 466667665432 3458999999988999999999999999966
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+++++++++.++++++|+++++++++ .++.+.+.+++.+ ++|++|||.|+...++.++++++++ |+++.+|...
T Consensus 191 v~~~~~~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 266 (341)
T PRK05396 191 VVITDVNEYRLELARKMGATRAVNVAK---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPP 266 (341)
T ss_pred EEEEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC
Confidence 888888889999999999999998877 6788888888876 9999999999877789999999997 9999998754
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEeC
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMG 338 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~ 338 (339)
. ...++...+..++.++.++... ...+.+..+++++.++ +.+.+++.++++++++.+|++.+.++...|++++++
T Consensus 267 ~--~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 267 G--DMAIDWNKVIFKGLTIKGIYGR--EMFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred C--CCcccHHHHhhcceEEEEEEcc--CccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 2 2333456666778888776422 1234566788888888 545455779999999999999988776449998764
No 59
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2.4e-33 Score=260.70 Aligned_cols=294 Identities=24% Similarity=0.320 Sum_probs=234.5
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCC---CCCCCCCCcccccccCCc
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI---SPWMPRDQTSRFKDLRGE 96 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~---~~g~~~~g~~~~~~~~~~ 96 (339)
.+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|..|+.+++++|....... .+|+.. ..
T Consensus 52 ~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~-----~~----- 121 (375)
T cd08282 52 EPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVD-----MG----- 121 (375)
T ss_pred CCCceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccc-----cC-----
Confidence 46899999999999999999999999999999899999999999999999997532100 011100 00
Q ss_pred eeecccccccccceEEeecc--ceEEcCCCCCcc---ccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHH
Q 019535 97 TIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPN---RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEG 171 (339)
Q Consensus 97 ~~~~~~~~g~~~~~~~~~~~--~~~~lp~~~~~~---~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~l 171 (339)
...|+|+||+.++.+ .++++|++++++ .++.++++++|||+++ ..+++.++++|||.|+|++|++++|+
T Consensus 122 -----~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~ 195 (375)
T cd08282 122 -----PYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYS 195 (375)
T ss_pred -----CCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHH
Confidence 001399999999976 899999999998 5677888999999987 77889999999999889999999999
Q ss_pred HHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHH-----------HHHHH
Q 019535 172 ARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS-----------LVQEA 240 (339)
Q Consensus 172 a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~-----------~~~~~ 240 (339)
|+++|+++|+++++++++.+.++++|+ ..+++++ .++.+.+.+++.+++|++|||+|... .+..+
T Consensus 196 a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v~~~~---~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~ 271 (375)
T cd08282 196 AILRGASRVYVVDHVPERLDLAESIGA-IPIDFSD---GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQL 271 (375)
T ss_pred HHHcCCCEEEEECCCHHHHHHHHHcCC-eEeccCc---ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHH
Confidence 999997678889989999999999998 4566666 67788888876668999999998762 48899
Q ss_pred HHHhhcCCcEEEEeccCCCCC-----------cccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccc
Q 019535 241 YACCRKGWGKTIVLGVDQPGS-----------QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFV 309 (339)
Q Consensus 241 ~~~l~~~~G~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i 309 (339)
+++++++ |+++.+|...... ...+++..+..++..+.+... ..++.+.++++++.++++.+..++
T Consensus 272 ~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~ 347 (375)
T cd08282 272 IRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVV 347 (375)
T ss_pred HHHhhcC-cEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcE
Confidence 9999997 9999887643111 123455556666776665432 124568889999999988765557
Q ss_pred eeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535 310 THEMKFEEINSAFDLLIKGKCLRCVIWM 337 (339)
Q Consensus 310 ~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 337 (339)
+++|+++++++|++.+.++...|+|+.+
T Consensus 348 ~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 348 SHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred EEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 8999999999999999888833998753
No 60
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=1.5e-33 Score=264.05 Aligned_cols=284 Identities=21% Similarity=0.236 Sum_probs=234.7
Q ss_pred ccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCceeeccc
Q 019535 24 ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFV 102 (339)
Q Consensus 24 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~ 102 (339)
++|||++|+|+++|++++.+++||+|+..+...|++|++|+.+++++|..... .|+. .+
T Consensus 80 v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~----------------- 139 (398)
T TIGR01751 80 IIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNF----------------- 139 (398)
T ss_pred ecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCC-----------------
Confidence 89999999999999999999999999999999999999999999999965432 3322 22
Q ss_pred ccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHH--hcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 019535 103 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR 179 (339)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~--~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~ 179 (339)
|+|+||+.++...++++|+++++++++.+.+++.|||+++.. ..++.++++|+|+|+ |++|++++++|+.+|+ +
T Consensus 140 --g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~ 216 (398)
T TIGR01751 140 --GSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-N 216 (398)
T ss_pred --ccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-e
Confidence 399999999999999999999999999999999999998755 467889999999997 9999999999999999 7
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCC-------------------CccHHHHHHHhcCC-CccEEEEcCCCHHHHHH
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG-GADYCFECVGLASLVQE 239 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~-------------------~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~ 239 (339)
++++++++++.+.++++|++.++|+++.. ...+.+.+.+++.+ ++|++|||+|... +..
T Consensus 217 vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~ 295 (398)
T TIGR01751 217 PVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPT 295 (398)
T ss_pred EEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHH
Confidence 88888888999999999999999865410 01244567777776 8999999999755 889
Q ss_pred HHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHH
Q 019535 240 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEIN 319 (339)
Q Consensus 240 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~ 319 (339)
++++++++ |+++.+|.... ....++...+..++.++.++.... ..++++++++++++.+.. .+++++++++++
T Consensus 296 ~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~ 368 (398)
T TIGR01751 296 SVFVCRRG-GMVVICGGTTG-YNHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP--TLSKVYPLEEIG 368 (398)
T ss_pred HHHhhccC-CEEEEEccccC-CCCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc--ceeeEEcHHHHH
Confidence 99999997 99999987532 223445555666677777765433 245788999999997763 367999999999
Q ss_pred HHHHHHhcCcee-EEEEEeC
Q 019535 320 SAFDLLIKGKCL-RCVIWMG 338 (339)
Q Consensus 320 ~A~~~~~~~~~~-kvvl~~~ 338 (339)
++++.+.++... |+|+.+.
T Consensus 369 ~a~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 369 QAHQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred HHHHHHHcCCCCceEEEEeC
Confidence 999999888765 9988764
No 61
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=2.3e-33 Score=255.30 Aligned_cols=269 Identities=24% Similarity=0.371 Sum_probs=224.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCcccccccCCcee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETI 98 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~ 98 (339)
++|.++|||++|+|+++|++ +++||+|...+..+|+.|.+|..+.+++|..... .++ ..+|
T Consensus 49 ~~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g------------ 110 (319)
T cd08242 49 PFPGVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRDG------------ 110 (319)
T ss_pred CCCCccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCCC------------
Confidence 36889999999999999988 6899999999999999999999999999976542 333 1233
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
+|++|++++.+.++++|++++.++++.+ .++.+++. +.+..+++++++|||+|+|.+|++++|+|+.+|+
T Consensus 111 -------~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~- 180 (319)
T cd08242 111 -------AFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP- 180 (319)
T ss_pred -------ceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence 9999999999999999999999888864 35566666 5577889999999999989999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|++++.++++.++++++|++.++++++ . +.+ ++|++|||+|+...++.++++++++ |+++..+..
T Consensus 181 ~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~ 247 (319)
T cd08242 181 DVVLVGRHSEKLALARRLGVETVLPDEA---E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTY 247 (319)
T ss_pred eEEEEcCCHHHHHHHHHcCCcEEeCccc---c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccc
Confidence 7999999999999999999988776644 1 234 8999999999876689999999997 999987654
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 337 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 337 (339)
. ....++...+..++.++.+...+ .++++++++.++++++.++++++|+++++++|++.++++...|++|++
T Consensus 248 ~--~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 319 (319)
T cd08242 248 A--GPASFDLTKAVVNEITLVGSRCG------PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP 319 (319)
T ss_pred C--CCCccCHHHheecceEEEEEecc------cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence 3 23445566677788888876532 378899999999887666678999999999999999877656998863
No 62
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=3e-33 Score=256.74 Aligned_cols=285 Identities=26% Similarity=0.402 Sum_probs=229.0
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|++|+.|++||+|+..+..+|++|.+|..|+.+.|....+ ++... +++
T Consensus 52 ~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~----~~~-------- 116 (339)
T cd08232 52 REPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAM----RFP-------- 116 (339)
T ss_pred cCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccc---eeecc----ccC--------
Confidence 568899999999999999999999999999999889999999999999999986542 22110 000
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
...|+|++|++++.+.++++|+++++++|+. ..+++|+|+++.+...+ ++++|||.|+|.+|++++|+|+.+|+++
T Consensus 117 --~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~ 192 (339)
T cd08232 117 --HVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAE 192 (339)
T ss_pred --CCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 0123999999999999999999999999876 56888999987665555 8999999988999999999999999867
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhc-CC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT-DG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~-~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
|+++++++++.+.++++|+++++++++ .++ .++. .+ ++|++||++++...++..+++|+++ |+++.+|..
T Consensus 193 v~~~~~s~~~~~~~~~~g~~~vi~~~~---~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~ 264 (339)
T cd08232 193 IVATDLADAPLAVARAMGADETVNLAR---DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGML 264 (339)
T ss_pred EEEECCCHHHHHHHHHcCCCEEEcCCc---hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecC
Confidence 899988888888889999989988765 332 2222 23 6999999999766689999999997 999999864
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 336 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 336 (339)
. .....++..++.+++++.+... ..+.++++++++.++.+.+...+.++|+++++++|++.+.++... |+|++
T Consensus 265 ~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 338 (339)
T cd08232 265 G--GPVPLPLNALVAKELDLRGSFR----FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLS 338 (339)
T ss_pred C--CCccCcHHHHhhcceEEEEEec----CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEe
Confidence 3 2233344445667788776642 234688899999999887666677899999999999999877655 99886
Q ss_pred e
Q 019535 337 M 337 (339)
Q Consensus 337 ~ 337 (339)
+
T Consensus 339 ~ 339 (339)
T cd08232 339 F 339 (339)
T ss_pred C
Confidence 4
No 63
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1.5e-33 Score=258.57 Aligned_cols=285 Identities=23% Similarity=0.376 Sum_probs=232.0
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEe-eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVI-PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
.++|.++|||++|+|+++|++++.|++||+|+ .....+|++|.+|..+.+++|...... +.|+...+
T Consensus 51 ~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----------- 118 (337)
T cd05283 51 TKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVT-YNGKYPDG----------- 118 (337)
T ss_pred CCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhc-ccccccCC-----------
Confidence 45799999999999999999999999999997 445568999999999999999875431 11111001
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 177 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~ 177 (339)
....|+|+||+.++.+.++++|+++++++++.+.+.+.|||+++.. .++.++++++|.|+|.+|++++++|+.+|+
T Consensus 119 ---~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~ 194 (337)
T cd05283 119 ---TITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKR-NGVGPGKRVGVVGIGGLGHLAVKFAKALGA 194 (337)
T ss_pred ---CcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCC
Confidence 1112499999999999999999999999999999999999997644 568999999998889999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|+.+++++++.++++++|++.+++.+. .+... . ..+++|++|||++.....+.++++++++ |+++.+|..
T Consensus 195 -~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~ 265 (337)
T cd05283 195 -EVTAFSRSPSKKEDALKLGADEFIATKD---PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAP 265 (337)
T ss_pred -eEEEEcCCHHHHHHHHHcCCcEEecCcc---hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEecc
Confidence 8999999999999999999988887665 33322 1 2348999999999876588999999997 999999875
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 336 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 336 (339)
.. ...+++..++.++.++.+..... .++++.+++++.++++.+ .+ ++|+++++++||+.++++... |+|++
T Consensus 266 ~~--~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 266 EE--PLPVPPFPLIFGRKSVAGSLIGG---RKETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred CC--CCccCHHHHhcCceEEEEecccC---HHHHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 32 22456666677899999876543 357888999999997754 34 789999999999999988876 88874
No 64
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=4.1e-33 Score=255.93 Aligned_cols=285 Identities=25% Similarity=0.437 Sum_probs=234.2
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
++|.++|||++|+|+++|++++.|++||+|+..++..|+.|..|..+..++|...++ +|+...
T Consensus 54 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------- 116 (340)
T TIGR00692 54 KPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI---FGVDTD-------------- 116 (340)
T ss_pred CCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcce---EeecCC--------------
Confidence 468899999999999999999999999999998999999999999999999987653 333223
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
|+|++|++++++.++++|++++.+++ +++.++.+|++++ .....++++|+|.|+|.+|.+++|+|+.+|.+.
T Consensus 117 -----g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~ 188 (340)
T TIGR00692 117 -----GCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYP 188 (340)
T ss_pred -----CcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 39999999999999999999998655 4667889998865 345678999999888999999999999999944
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+++.+++++.+.++++|++.++++.. .++.+.+.+++++ ++|++|||+++...+...+++++++ |+++.+|...
T Consensus 189 v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~ 264 (340)
T TIGR00692 189 VIVSDPNEYRLELAKKMGATYVVNPFK---EDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPP 264 (340)
T ss_pred EEEECCCHHHHHHHHHhCCcEEEcccc---cCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCC
Confidence 888888888999999999988888876 6788888888776 9999999999877789999999997 9999998753
Q ss_pred CCCcccccHH-HHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535 259 PGSQLSLSSF-EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 337 (339)
Q Consensus 259 ~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 337 (339)
.. ..++.. .+..+++++.+... ....+.+.++++++.++++.+.+++.+.++++++.++++.+.++...|+|+.+
T Consensus 265 ~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 265 GK--VTIDFTNKVIFKGLTIYGITG--RHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred CC--cccchhhhhhhcceEEEEEec--CCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 22 222233 45566777766541 12234578899999999887655577999999999999999877655888864
No 65
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=2.4e-33 Score=255.80 Aligned_cols=258 Identities=16% Similarity=0.181 Sum_probs=212.1
Q ss_pred CCCCcccCCceeEEEEEecCCCCC-cCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 19 AVFPRILGHEAIGVVESVGENVDG-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
..+|.++|||++|+|+++|+++++ |++||+|+..+. .+
T Consensus 58 ~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~-----------------------------~~------------ 96 (324)
T cd08291 58 KALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAG-----------------------------SY------------ 96 (324)
T ss_pred CCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCC-----------------------------CC------------
Confidence 457899999999999999999996 999999975321 01
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE-c-cCHHHHHHHHHHHHc
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-G-LGSIGLAVAEGARLC 175 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~-G-~G~iG~~a~~la~~~ 175 (339)
|+|+||+.++++.++++|+++++++++.+++.+.|||. +.+.... .+++++|+ | +|++|++++|+|+.+
T Consensus 97 -------g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~ 167 (324)
T cd08291 97 -------GTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKAD 167 (324)
T ss_pred -------CcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHc
Confidence 38999999999999999999999999988888999975 4555555 56667776 4 599999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
|+ +|+++++++++.++++++|+++++++++ .++.+.+++++.+ ++|++||++|+.. ....+++++++ |+++.+
T Consensus 168 G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~ 241 (324)
T cd08291 168 GI-KVINIVRRKEQVDLLKKIGAEYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVY 241 (324)
T ss_pred CC-EEEEEeCCHHHHHHHHHcCCcEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEE
Confidence 99 8999999999999999999999999887 7888999998887 9999999999887 67789999997 999999
Q ss_pred ccCCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535 255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 331 (339)
Q Consensus 255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~ 331 (339)
|.........++...++.+++++.++....+.. .+++.++++++. +.+ +++++++|+++++.+|++.+.++...
T Consensus 242 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~~ 318 (324)
T cd08291 242 GYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMST 318 (324)
T ss_pred EecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCCC
Confidence 875332222245556677899998887544321 235777888887 644 45688999999999999999887665
Q ss_pred -EEEE
Q 019535 332 -RCVI 335 (339)
Q Consensus 332 -kvvl 335 (339)
|++|
T Consensus 319 Gkvv~ 323 (324)
T cd08291 319 GKKLL 323 (324)
T ss_pred CeEEe
Confidence 9886
No 66
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=6.6e-33 Score=254.31 Aligned_cols=282 Identities=27% Similarity=0.424 Sum_probs=232.4
Q ss_pred CCcccCCceeEEEEEecCCCCCcCCCCEEeecc-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 21 ~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.|.++|||++|+|+++|++++.|++||+|+..+ ..+|+.|..|..+..++|..... .|+..+|
T Consensus 53 ~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 116 (338)
T PRK09422 53 TGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYTVDG------------- 116 (338)
T ss_pred CCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccc---cCccccC-------------
Confidence 478999999999999999999999999998655 45899999999999999976653 4444444
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHc-CCC
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GAT 178 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~-G~~ 178 (339)
+|+||+.++.+.++++|+++++++++.+++++.|||+++ +.++++++++|||+|+|++|++++++|+.. |+
T Consensus 117 ------~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~- 188 (338)
T PRK09422 117 ------GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA- 188 (338)
T ss_pred ------cceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-
Confidence 999999999999999999999999999999999999986 778899999999999999999999999984 99
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
+|+++++++++.+.++++|++.+++++. ..++.+.+++.++ ++|++|.+.++...++.++++++.+ |+++.+|...
T Consensus 189 ~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~ 264 (338)
T PRK09422 189 KVIAVDINDDKLALAKEVGADLTINSKR--VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPP 264 (338)
T ss_pred eEEEEeCChHHHHHHHHcCCcEEecccc--cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCC
Confidence 8999999999999999999988888743 1356667777665 6886655555566699999999997 9999998653
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEEe
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 337 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 337 (339)
....++...+..+..++.++.... .++++.+++++.++.+.. .+ ..++++++++|++.+.++... |+++.+
T Consensus 265 --~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 265 --ESMDLSIPRLVLDGIEVVGSLVGT---RQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred --CCceecHHHHhhcCcEEEEecCCC---HHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEec
Confidence 233445555666778887654322 356888999999997753 35 468999999999999888766 998876
Q ss_pred C
Q 019535 338 G 338 (339)
Q Consensus 338 ~ 338 (339)
.
T Consensus 337 ~ 337 (338)
T PRK09422 337 T 337 (338)
T ss_pred C
Confidence 4
No 67
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.8e-33 Score=256.31 Aligned_cols=281 Identities=28% Similarity=0.426 Sum_probs=231.7
Q ss_pred CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
..++|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|..+.+++|..... +|...+|
T Consensus 51 ~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g----------- 116 (334)
T PRK13771 51 RMKYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEELDG----------- 116 (334)
T ss_pred CCCCCeeccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccc---cccccCc-----------
Confidence 34678899999999999999999889999999988888999999999999999987653 4433334
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG 176 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G 176 (339)
+|++|+.++.+.++++|+++++.+++.+++++.+||+++... ++.++++|||+|+ |.+|++++++|+..|
T Consensus 117 --------~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g 187 (334)
T PRK13771 117 --------FFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALG 187 (334)
T ss_pred --------eeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999987665 8899999999987 999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+ +|+++++++++.+.++++ ++++++.+ ++.+.++++ +++|++|||+|+.. ...++++++++ |+++.+|.
T Consensus 188 ~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~ 256 (334)
T PRK13771 188 A-KVIAVTSSESKAKIVSKY-ADYVIVGS-----KFSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQIGN 256 (334)
T ss_pred C-EEEEEeCCHHHHHHHHHH-HHHhcCch-----hHHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEec
Confidence 9 899999899999998888 66666543 344555554 37999999999876 88999999997 99999997
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 335 (339)
......+.......+.+++++.+... ..+++++++++++.++.+.. .+++.|+++++++|++.++++... |+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 331 (334)
T PRK13771 257 VDPSPTYSLRLGYIILKDIEIIGHIS---ATKRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKILV 331 (334)
T ss_pred cCCCCCcccCHHHHHhcccEEEEecC---CCHHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceEEE
Confidence 54322222334344567888887632 23467889999999997753 467899999999999999887665 9888
Q ss_pred Ee
Q 019535 336 WM 337 (339)
Q Consensus 336 ~~ 337 (339)
++
T Consensus 332 ~~ 333 (334)
T PRK13771 332 KP 333 (334)
T ss_pred ec
Confidence 75
No 68
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=7.2e-33 Score=253.72 Aligned_cols=284 Identities=22% Similarity=0.344 Sum_probs=239.6
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+.+|++++.|++||+|+..+..+|+.|.+|..+.+++|....+ .|+...|
T Consensus 56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~g------------- 119 (342)
T cd08266 56 PLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEHVDG------------- 119 (342)
T ss_pred CCCeecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccc---cccccCc-------------
Confidence 568899999999999999999999999999999999999999999999999987653 4443333
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 178 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~ 178 (339)
++++|+.++.+.++++|+++++++++.+++++.+|++++.+..++.++++++|+|+ +.+|++++++++..|+
T Consensus 120 ------~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~- 192 (342)
T cd08266 120 ------GYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA- 192 (342)
T ss_pred ------ceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-
Confidence 89999999999999999999999999999999999998888888999999999987 6999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|+.+++++++.+.++.++...+++..+ .+..+.+.+.+.+ ++|++++++|... ++.++++++++ |+++.++..
T Consensus 193 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~ 267 (342)
T cd08266 193 TVIATAGSEDKLERAKELGADYVIDYRK---EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGAT 267 (342)
T ss_pred EEEEEeCCHHHHHHHHHcCCCeEEecCC---hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecC
Confidence 8999999988888888888877777665 6677777777766 8999999999866 88999999997 999999865
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 336 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 336 (339)
... ....+....+.+++++.+..... ...+.++++++.++.+.+ ++++.|+++++++|++.+.++... |++++
T Consensus 268 ~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 341 (342)
T cd08266 268 TGY-EAPIDLRHVFWRQLSILGSTMGT---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLT 341 (342)
T ss_pred CCC-CCCcCHHHHhhcceEEEEEecCC---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence 432 23344445566788887765332 346788899999987653 467899999999999999877665 88876
Q ss_pred e
Q 019535 337 M 337 (339)
Q Consensus 337 ~ 337 (339)
+
T Consensus 342 ~ 342 (342)
T cd08266 342 P 342 (342)
T ss_pred C
Confidence 3
No 69
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=2.5e-33 Score=236.48 Aligned_cols=275 Identities=23% Similarity=0.305 Sum_probs=223.9
Q ss_pred CCCCcCC-----CCCcccCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCC
Q 019535 5 KPSNKTA-----GKPIQCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS 79 (339)
Q Consensus 5 ~~~~~~~-----g~~~~~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~ 79 (339)
-|-||.+ |. |+.++.+|.|-|+|++|+|++||+++++|++||+|+....
T Consensus 57 aPINPsDIN~IQGv-YpvrP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a------------------------- 110 (354)
T KOG0025|consen 57 APINPSDINQIQGV-YPVRPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSA------------------------- 110 (354)
T ss_pred cCCChHHhhhhccc-cCCCCCCCcccCCcceEEEEEecCCcCccCCCCeEeecCC-------------------------
Confidence 3566665 76 7789999999999999999999999999999999976432
Q ss_pred CCCCCCCcccccccCCceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE
Q 019535 80 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF 159 (339)
Q Consensus 80 ~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~ 159 (339)
+.|+|++|.+.+++.+++++..++++.||.+.++-+|||.+|.+..++.+|++|+-.
T Consensus 111 -----------------------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQN 167 (354)
T KOG0025|consen 111 -----------------------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQN 167 (354)
T ss_pred -----------------------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeec
Confidence 134999999999999999999999999999999999999999999999999988777
Q ss_pred cc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCC
Q 019535 160 GL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL 233 (339)
Q Consensus 160 G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~ 233 (339)
|+ +.+|++.+|+|+++|. +.+.++|+....+.+ +.+||++|+..+++... +..+..... .+.+.|||+|+
T Consensus 168 ganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~---~~~k~~~~~~~prLalNcVGG 243 (354)
T KOG0025|consen 168 GANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR---KMKKFKGDNPRPRLALNCVGG 243 (354)
T ss_pred CcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch---hhhhhhccCCCceEEEeccCc
Confidence 87 8999999999999999 888888887665555 56899999976652211 112222233 88999999999
Q ss_pred HHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCC--------cHHHHHHHHhCCCCCC
Q 019535 234 ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS--------DIPILLKRYMDKELEL 305 (339)
Q Consensus 234 ~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~l~~g~l~~ 305 (339)
.+ ..+..+.|.++ |+++.||.+ ..++..++...+++|++.++|+++..|.... .+.++.+++..|++..
T Consensus 244 ks-a~~iar~L~~G-gtmvTYGGM-SkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~ 320 (354)
T KOG0025|consen 244 KS-ATEIARYLERG-GTMVTYGGM-SKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKA 320 (354)
T ss_pred hh-HHHHHHHHhcC-ceEEEecCc-cCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecc
Confidence 99 77888999998 999999986 4678888999999999999999988776322 3567889999998865
Q ss_pred cccceeeechhhHHHHHHHHhcCce--eEEEEEe
Q 019535 306 DKFVTHEMKFEEINSAFDLLIKGKC--LRCVIWM 337 (339)
Q Consensus 306 ~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvl~~ 337 (339)
+. ....+|++-..|++...+.-. .|-++.+
T Consensus 321 ~~--~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 321 PN--CEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred cc--ceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 53 367788888888886554432 2555554
No 70
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.2e-32 Score=252.86 Aligned_cols=274 Identities=22% Similarity=0.314 Sum_probs=219.6
Q ss_pred CCCcccCCceeEEEEEecCCCCC-cCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 20 VFPRILGHEAIGVVESVGENVDG-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
.+|.++|+|++|+|+++|++++. |++||+|+..+...|+.|++|..++.+ ...
T Consensus 62 ~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~-------------~~~------------- 115 (341)
T cd08262 62 GADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP-------------EAP------------- 115 (341)
T ss_pred CCCcccccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc-------------CCC-------------
Confidence 46889999999999999999987 999999999999999999999321110 012
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
|+|+||++++.+.++++|+++++++++ +++++++||++ ....+++++++|||+|+|.+|.+++|+|+.+|++
T Consensus 116 ------g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~ 187 (341)
T cd08262 116 ------GGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVG 187 (341)
T ss_pred ------CceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence 389999999999999999999999887 56689999997 5778899999999998899999999999999996
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHH---HHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQ---IIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~---~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
.+++++.++++.+.++++|++++++++. .+..+ .+.+.+.+ ++|++||++|+...+..++++++++ |+++.+
T Consensus 188 ~v~~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~ 263 (341)
T cd08262 188 PIVASDFSPERRALALAMGADIVVDPAA---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVV 263 (341)
T ss_pred EEEEECCCHHHHHHHHHcCCcEEEcCCC---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEE
Confidence 6888888899999999999988998765 32221 34445555 8999999999865588999999997 999999
Q ss_pred ccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535 255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 333 (339)
Q Consensus 255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv 333 (339)
|...... .+.......++.++.+.... ..+++.++++++.++.+.+.++++++|+++++++|++.+.++... |+
T Consensus 264 g~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kv 338 (341)
T cd08262 264 GVCMESD--NIEPALAIRKELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKI 338 (341)
T ss_pred CCCCCCC--ccCHHHHhhcceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEE
Confidence 8653222 12222224456776654321 234688899999999888766667999999999999999888765 88
Q ss_pred EEE
Q 019535 334 VIW 336 (339)
Q Consensus 334 vl~ 336 (339)
|++
T Consensus 339 vv~ 341 (341)
T cd08262 339 LVD 341 (341)
T ss_pred EeC
Confidence 863
No 71
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.8e-32 Score=251.78 Aligned_cols=283 Identities=29% Similarity=0.453 Sum_probs=241.2
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeecc-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
.+|.++|||++|+|+++|++++.+++||+|+..+ ...|+.|.+|..++.++|.+..+ .|+...|
T Consensus 55 ~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------ 119 (341)
T cd08297 55 KLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYTVDG------------ 119 (341)
T ss_pred CCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccc---cccccCC------------
Confidence 4577899999999999999999999999998765 46899999999999999988754 5554444
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 177 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~ 177 (339)
++++|+.++.+.++++|+++++++++.+++.+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+
T Consensus 120 -------~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~ 191 (341)
T cd08297 120 -------TFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL 191 (341)
T ss_pred -------cceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC
Confidence 89999999999999999999999999999999999998655 58899999999987 6799999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+|+++.+++++.+.++++|++.++++++ .++.+.+.+++++ ++|++||+.++...+..++++++.+ |+++.+|.
T Consensus 192 -~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~ 266 (341)
T cd08297 192 -RVIAIDVGDEKLELAKELGADAFVDFKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGL 266 (341)
T ss_pred -eEEEEeCCHHHHHHHHHcCCcEEEcCCC---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecC
Confidence 8999999999999999999999998877 6788888888876 9999999888777799999999997 99999986
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 335 (339)
.. .....++...+..++.++.+..... .++++.+++++.++.+.+ .+ +.|++++++++++.+.++... |+++
T Consensus 267 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi 339 (341)
T cd08297 267 PP-GGFIPLDPFDLVLRGITIVGSLVGT---RQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVV 339 (341)
T ss_pred CC-CCCCCCCHHHHHhcccEEEEeccCC---HHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEE
Confidence 53 2333556666667888888754321 357888999999998754 34 679999999999999887766 9988
Q ss_pred Ee
Q 019535 336 WM 337 (339)
Q Consensus 336 ~~ 337 (339)
++
T Consensus 340 ~~ 341 (341)
T cd08297 340 DF 341 (341)
T ss_pred eC
Confidence 75
No 72
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.2e-32 Score=253.02 Aligned_cols=284 Identities=27% Similarity=0.429 Sum_probs=229.9
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|.+|+.+.+++|...++ .|....
T Consensus 56 ~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------- 118 (341)
T cd05281 56 KPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI---LGVDTD-------------- 118 (341)
T ss_pred CCCcccccceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccce---EeccCC--------------
Confidence 467899999999999999999999999999988888999999999999999965432 332222
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
|+|++|++++.+.++++|++++++.+ +++.++.++++++. ....++++|||.|+|.+|++++|+|+.+|..+
T Consensus 119 -----g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~ 190 (341)
T cd05281 119 -----GCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASL 190 (341)
T ss_pred -----CcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 38999999999999999999998555 55567888888654 34578999999988999999999999999856
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+++++++++.+.++++|++++++.+. .++. .+.+++.+ ++|++|||+|+...+..++++++++ |+++.+|...
T Consensus 191 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 265 (341)
T cd05281 191 VIASDPNPYRLELAKKMGADVVINPRE---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPP 265 (341)
T ss_pred EEEECCCHHHHHHHHHhCcceeeCccc---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC
Confidence 888888888999999999988888766 5677 78888877 9999999999877789999999997 9999998653
Q ss_pred CCCcccccHH-HHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCceeEEEEEe
Q 019535 259 PGSQLSLSSF-EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 337 (339)
Q Consensus 259 ~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 337 (339)
. ...+++. ....++..+.+... ....+.+.++++++.++.+.+..++.++++++++++|++.+.++...|+++++
T Consensus 266 ~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~ 341 (341)
T cd05281 266 G--PVDIDLNNLVIFKGLTVQGITG--RKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP 341 (341)
T ss_pred C--CcccccchhhhccceEEEEEec--CCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence 2 2222222 24556777776542 12235678899999999887666677889999999999999888833998863
No 73
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.8e-32 Score=251.99 Aligned_cols=287 Identities=27% Similarity=0.473 Sum_probs=235.4
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
..|.++|+|++|+|+++|++++.|++||+|+..+...|+.|.+|..++++.|+.... +|....
T Consensus 51 ~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------- 113 (343)
T cd08236 51 HPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSRRD-------------- 113 (343)
T ss_pred CCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcce---EecccC--------------
Confidence 467899999999999999999999999999998888999999999999999976532 333223
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
|+|++|+.++++.++++|+++++++++++ .+++|||+++. ...+.++++|||+|+|.+|.+++|+|+.+|++.
T Consensus 114 -----g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~ 186 (343)
T cd08236 114 -----GAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKR 186 (343)
T ss_pred -----CcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 39999999999999999999999999887 58899999874 778999999999988999999999999999944
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+++++++++.+.++++|+..++++++ .. .+++.+...+ ++|++|||+|....+..++++++++ |+++.+|...
T Consensus 187 v~~~~~~~~~~~~l~~~g~~~~~~~~~---~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 261 (343)
T cd08236 187 VIAVDIDDEKLAVARELGADDTINPKE---ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPY 261 (343)
T ss_pred EEEEcCCHHHHHHHHHcCCCEEecCcc---cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccC
Confidence 999998899999999999989998876 55 7777777777 8999999998876689999999997 9999998654
Q ss_pred CCCcc-cccHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhc-Ccee-EE
Q 019535 259 PGSQL-SLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK-GKCL-RC 333 (339)
Q Consensus 259 ~~~~~-~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~-~~~~-kv 333 (339)
....+ ......++.++.++.++...... .++.++++++++.++.+.+.+++.+++++++++++++.+++ +... |+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 341 (343)
T cd08236 262 GDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKV 341 (343)
T ss_pred CCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEE
Confidence 22111 22334455778888877653221 14567889999999987644446689999999999999988 5444 77
Q ss_pred EE
Q 019535 334 VI 335 (339)
Q Consensus 334 vl 335 (339)
|+
T Consensus 342 v~ 343 (343)
T cd08236 342 LL 343 (343)
T ss_pred eC
Confidence 64
No 74
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.6e-32 Score=252.88 Aligned_cols=274 Identities=23% Similarity=0.306 Sum_probs=222.4
Q ss_pred CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
+..+|.++|||++|+|+++|+++++|++||+|+..+.+.|+.|..|.. |. + +|...+|
T Consensus 74 ~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~---~---~~~~~~g----------- 131 (350)
T cd08274 74 TLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----ID---Y---IGSERDG----------- 131 (350)
T ss_pred CCCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cc---c---cCCCCCc-----------
Confidence 346899999999999999999999999999999988888888876531 21 0 2222223
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG 176 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G 176 (339)
+|++|+.++.+.++++|+++++++++.+++++.|||+++ +..+++++++|||+|+ |++|++++++|+.+|
T Consensus 132 --------~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g 202 (350)
T cd08274 132 --------GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRG 202 (350)
T ss_pred --------cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999976 7788999999999997 999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+ ++++++++. +.+.++++|++.+++... ....+ ...+.+ ++|++||++|+.. ++.++++++.+ |+++.+|
T Consensus 203 ~-~vi~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g 273 (350)
T cd08274 203 A-IVIAVAGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAG 273 (350)
T ss_pred C-EEEEEeCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHHH-HHHHHHHhccC-CEEEEec
Confidence 9 788888655 788888999876665444 33333 455555 9999999999865 89999999997 9999998
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEE
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCV 334 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv 334 (339)
... .....++...++.+++++.++.... .+.+.++++++.++++.+ +++++|+++++.+|++.+.++... |++
T Consensus 274 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv 347 (350)
T cd08274 274 AIA-GPVVELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLV 347 (350)
T ss_pred ccC-CccccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEE
Confidence 652 2224566666677888988876432 356888999999997653 366899999999999999877665 888
Q ss_pred EEe
Q 019535 335 IWM 337 (339)
Q Consensus 335 l~~ 337 (339)
+.+
T Consensus 348 i~~ 350 (350)
T cd08274 348 LVP 350 (350)
T ss_pred EeC
Confidence 763
No 75
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.2e-32 Score=248.54 Aligned_cols=281 Identities=28% Similarity=0.481 Sum_probs=232.6
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|+|++|+|+++|++++.+++||+|+..+...|+.|++|..++.++|.+... .|...+|
T Consensus 51 ~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 114 (334)
T cd08234 51 APPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVTRNG------------- 114 (334)
T ss_pred CCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcce---eccCCCC-------------
Confidence 378899999999999999999999999999998888999999999999999977642 3333334
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
+|++|+.++.+.++++|+++++.+++.+ +++.++++++ +.+++.++++|||+|+|.+|.+++++|+..|+++
T Consensus 115 ------~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~ 186 (334)
T cd08234 115 ------GFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASR 186 (334)
T ss_pred ------cceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 9999999999999999999999998876 6888999877 7789999999999988999999999999999944
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+++++++++.+.++++|++.+++..+ .+.... +.+.+ ++|++|||++.......++++++++ |+++.+|...
T Consensus 187 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~ 260 (334)
T cd08234 187 VTVAEPNEEKLELAKKLGATETVDPSR---EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYA 260 (334)
T ss_pred EEEECCCHHHHHHHHHhCCeEEecCCC---CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCC
Confidence 888998999999999999888888766 454444 34444 8999999998777789999999997 9999998754
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 335 (339)
......+....++.+++++.+.... .+.+++++++++++++.+...++++++++++++|++.+.+ ... |+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 261 PDARVSISPFEIFQKELTIIGSFIN----PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred CCCCcccCHHHHHhCCcEEEEeccC----HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 3233445555555567887776432 2458889999999988765556789999999999999988 444 8776
No 76
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=2.6e-32 Score=251.10 Aligned_cols=261 Identities=20% Similarity=0.223 Sum_probs=204.0
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
.++|.++|||++|+|+++|++|++|++||+|+...
T Consensus 66 ~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--------------------------------------------- 100 (345)
T cd08293 66 APWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN--------------------------------------------- 100 (345)
T ss_pred CCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC---------------------------------------------
Confidence 35789999999999999999999999999996310
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccc----cccccchhhhhhHHHHHhcCCCCC--CEEEEEcc-CHHHHHHHHH
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR----ACLLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLAVAEG 171 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~----aa~l~~~~~ta~~al~~~~~~~~~--~~VLI~G~-G~iG~~a~~l 171 (339)
+.|+||++++++.++++|+++++.+ ++.+++++.|||+++.+.++++++ ++|||+|+ |++|++++|+
T Consensus 101 ------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiql 174 (345)
T cd08293 101 ------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQI 174 (345)
T ss_pred ------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHH
Confidence 1799999999999999999865443 445677899999988788888876 99999987 9999999999
Q ss_pred HHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcE
Q 019535 172 ARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 250 (339)
Q Consensus 172 a~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~ 250 (339)
|+++|+++|+++++++++.+++++ +|+++++++.+ .++.+.+++++++++|++||++|+.. +..++++++++ |+
T Consensus 175 Ak~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~---~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~ 249 (345)
T cd08293 175 GRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT---DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SH 249 (345)
T ss_pred HHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC---CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CE
Confidence 999998569999999999999876 99999999887 78888888887669999999999987 79999999997 99
Q ss_pred EEEeccCCCC-C--c--cccc--HHHH-hhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHH
Q 019535 251 TIVLGVDQPG-S--Q--LSLS--SFEV-LHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320 (339)
Q Consensus 251 ~v~~g~~~~~-~--~--~~~~--~~~~-~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~ 320 (339)
++.+|..... . . ..+. ...+ ..+++++.++...... ..+.++++++++.++++.+. +...++++++.+
T Consensus 250 iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~ 327 (345)
T cd08293 250 IILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGE 327 (345)
T ss_pred EEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHH
Confidence 9999853211 0 0 1111 1111 2234444333221111 11236678889999988754 335579999999
Q ss_pred HHHHHhcCcee-EEEEEe
Q 019535 321 AFDLLIKGKCL-RCVIWM 337 (339)
Q Consensus 321 A~~~~~~~~~~-kvvl~~ 337 (339)
|++.+.+++.. |+|+++
T Consensus 328 A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 328 AFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHhcCCCCCeEEEEC
Confidence 99999888765 999864
No 77
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.5e-32 Score=250.72 Aligned_cols=255 Identities=21% Similarity=0.257 Sum_probs=206.2
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
..|.++|.|++|+|+++|+ .|++||+|+..
T Consensus 56 ~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~----------------------------------------------- 85 (325)
T TIGR02825 56 EGDTMMGQQVARVVESKNV---ALPKGTIVLAS----------------------------------------------- 85 (325)
T ss_pred CCCcEecceEEEEEEeCCC---CCCCCCEEEEe-----------------------------------------------
Confidence 4578999999999999874 69999999531
Q ss_pred cccccccccceEEeeccceEEc----CCCCCcccc-ccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHH
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKV----DPTVPPNRA-CLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGAR 173 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~l----p~~~~~~~a-a~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~ 173 (339)
++|++|++++.+++.++ |++++++++ +++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+
T Consensus 86 -----~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk 160 (325)
T TIGR02825 86 -----PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAK 160 (325)
T ss_pred -----cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHH
Confidence 16899999999988888 899999987 6788999999999888899999999999986 999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535 174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 253 (339)
Q Consensus 174 ~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 253 (339)
..|+ +|+++++++++.++++++|+++++++++ ...+.+.++...++++|++||++|+.. ++.++++++++ |+++.
T Consensus 161 ~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~~~~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~ 235 (325)
T TIGR02825 161 LKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKSLEETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAI 235 (325)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--cccHHHHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEE
Confidence 9999 8999999999999999999999999876 124556666655448999999999876 79999999997 99999
Q ss_pred eccCCCC---Cccc--ccHHHHhhcCCeEEeeecCCCC---CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHH
Q 019535 254 LGVDQPG---SQLS--LSSFEVLHSGKILMGSLFGGLK---AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLL 325 (339)
Q Consensus 254 ~g~~~~~---~~~~--~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~ 325 (339)
+|..... .... .....+..+++++.++....+. ..+.+.++++++.+|++.+. +..+|+++++.+|++.+
T Consensus 236 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~ 313 (325)
T TIGR02825 236 CGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGM 313 (325)
T ss_pred ecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHH
Confidence 9864321 1111 1233456668888776543221 12357889999999988765 44678999999999999
Q ss_pred hcCcee-EEEEE
Q 019535 326 IKGKCL-RCVIW 336 (339)
Q Consensus 326 ~~~~~~-kvvl~ 336 (339)
++++.. |+|++
T Consensus 314 ~~~~~~gkvVv~ 325 (325)
T TIGR02825 314 LKGENLGKTIVK 325 (325)
T ss_pred hcCCCCCeEEeC
Confidence 888766 88864
No 78
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=3.4e-32 Score=248.23 Aligned_cols=268 Identities=26% Similarity=0.354 Sum_probs=221.0
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|++++.|++||+|+..+...|+.|..|..+.+++|....+ +|+...|
T Consensus 53 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~g------------- 116 (325)
T cd08264 53 PMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVVSNG------------- 116 (325)
T ss_pred CCCeecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccce---eeccCCC-------------
Confidence 468899999999999999999999999999988888999999999999999987543 4443334
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 178 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~ 178 (339)
+|++|+.++++.++++|+++++++++.+++++.|||+++.. ++++++++|+|+|+ |++|++++++|+.+|+
T Consensus 117 ------~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~- 188 (325)
T cd08264 117 ------GYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA- 188 (325)
T ss_pred ------ceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-
Confidence 89999999999999999999999999999999999998654 88999999999987 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
+|+++++ .+.++++|++++++.++ ..+.+++++ +++|+++|++|+.. +..++++++++ |+++.+|...
T Consensus 189 ~v~~~~~----~~~~~~~g~~~~~~~~~-----~~~~l~~~~-~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~ 256 (325)
T cd08264 189 EVIAVSR----KDWLKEFGADEVVDYDE-----VEEKVKEIT-KMADVVINSLGSSF-WDLSLSVLGRG-GRLVTFGTLT 256 (325)
T ss_pred eEEEEeH----HHHHHHhCCCeeecchH-----HHHHHHHHh-CCCCEEEECCCHHH-HHHHHHhhccC-CEEEEEecCC
Confidence 7888763 36677899888887543 245566666 68999999999854 89999999997 9999998642
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 331 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~ 331 (339)
.....++...+..++.++.+...+. ++.+.++++++... ++ .++++|+++++++|++.+.++...
T Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~--~~--~~~~~~~~~~~~~a~~~~~~~~~~ 321 (325)
T cd08264 257 -GGEVKLDLSDLYSKQISIIGSTGGT---RKELLELVKIAKDL--KV--KVWKTFKLEEAKEALKELFSKERD 321 (325)
T ss_pred -CCCCccCHHHHhhcCcEEEEccCCC---HHHHHHHHHHHHcC--Cc--eeEEEEcHHHHHHHHHHHHcCCCc
Confidence 2234566666777788887764332 35688888888543 32 356899999999999998876554
No 79
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=7.9e-32 Score=245.55 Aligned_cols=258 Identities=20% Similarity=0.244 Sum_probs=217.5
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
+.+|.++|||++|+|+++|++++.+++||+|+..+. .
T Consensus 56 ~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~------------------------------~------------- 92 (324)
T cd08292 56 PELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPV------------------------------H------------- 92 (324)
T ss_pred CCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEeccC------------------------------C-------------
Confidence 356899999999999999999999999999965321 1
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 177 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~ 177 (339)
|+|++|+.+++..++++|+++++++++.+++.+.|||+++ ..+++.++++|||+|+ |.+|++++|+|+.+|+
T Consensus 93 ------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~ 165 (324)
T cd08292 93 ------GTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI 165 (324)
T ss_pred ------CcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC
Confidence 3899999999999999999999999999998899999976 5578999999999986 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+++++..++++.+.++++|++++++.++ .++.+.+.+++.+ ++|++|||+|+.. ...++++++++ |+++.+|.
T Consensus 166 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~ 239 (324)
T cd08292 166 -NVINLVRRDAGVAELRALGIGPVVSTEQ---PGWQDKVREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGS 239 (324)
T ss_pred -eEEEEecCHHHHHHHHhcCCCEEEcCCC---chHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEec
Confidence 8899988888888888899989988877 7788889999888 9999999999876 78999999997 99999987
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCC-------CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLK-------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~ 329 (339)
.. .....+++...+.++.++.++....+. ..+.+.++++++.++.+.+. +.++|+++++.+|++.+.++.
T Consensus 240 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~ 316 (324)
T cd08292 240 MS-GEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPG 316 (324)
T ss_pred CC-CCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCC
Confidence 52 233455655566789999887654321 12357889999999988754 468899999999999988766
Q ss_pred ee-EEEE
Q 019535 330 CL-RCVI 335 (339)
Q Consensus 330 ~~-kvvl 335 (339)
.. |+++
T Consensus 317 ~~~kvvv 323 (324)
T cd08292 317 RAGKVLL 323 (324)
T ss_pred CCceEEe
Confidence 55 8776
No 80
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.1e-31 Score=245.27 Aligned_cols=278 Identities=26% Similarity=0.426 Sum_probs=228.3
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
..+|.++|||++|+|+++|+++++|++||+|++.+. .+|++|++|+++.+++|++..+ +++...|
T Consensus 51 ~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g----------- 116 (330)
T cd08245 51 SKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQG----------- 116 (330)
T ss_pred CCCCcccCccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccc---cCcccCC-----------
Confidence 357889999999999999999999999999987665 6899999999999999998653 4432233
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 177 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~ 177 (339)
+|++|+.++.+.++++|+++++++++.+++.+.|||+++.. .++.++++|||+|+|.+|++++++|+.+|+
T Consensus 117 --------~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~ 187 (330)
T cd08245 117 --------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF 187 (330)
T ss_pred --------ccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC
Confidence 89999999999999999999999999999999999998754 789999999999888899999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|+++++++++.+.++++|++.+++... ...... ..+++|++||+++.......++++++++ |+++.++..
T Consensus 188 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~ 258 (330)
T cd08245 188 -ETVAITRSPDKRELARKLGADEVVDSGA---ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLP 258 (330)
T ss_pred -EEEEEeCCHHHHHHHHHhCCcEEeccCC---cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCC
Confidence 8999999999999999899888887655 333222 2237999999988777789999999997 999999864
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 335 (339)
... ........+..++.++.+...+. ...++.+++++.++.+.+ ..+.++++++++|++.+.++... |+++
T Consensus 259 ~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 259 ESP-PFSPDIFPLIMKRQSIAGSTHGG---RADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred CCC-ccccchHHHHhCCCEEEEeccCC---HHHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 322 22233445667788887775432 246788889999997764 23789999999999999887765 7664
No 81
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.8e-31 Score=243.83 Aligned_cols=279 Identities=31% Similarity=0.480 Sum_probs=228.6
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
...|.++|||++|+|+++|++++.|++||+|+..+...|+.|.+|+.+.+++|.+.. .+|....|
T Consensus 52 ~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g------------ 116 (332)
T cd08259 52 GKYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEEVDG------------ 116 (332)
T ss_pred CCCCeeccccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCcc---ccccccCC------------
Confidence 356789999999999999999999999999999888899999999999999998753 24443334
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 177 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~ 177 (339)
+|++|++++...++++|+++++++++.+++++.|||+++.. ..+.+++++||+|+ |.+|++++++++..|.
T Consensus 117 -------~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~ 188 (332)
T cd08259 117 -------GFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA 188 (332)
T ss_pred -------eeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999998766 88999999999987 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|+++++++++.+.++++|...+++.. ++.+.+.+.. ++|++|+++|... ...++++++++ |+++.++..
T Consensus 189 -~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~ 258 (332)
T cd08259 189 -RVIAVTRSPEKLKILKELGADYVIDGS-----KFSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNV 258 (332)
T ss_pred -eEEEEeCCHHHHHHHHHcCCcEEEecH-----HHHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCC
Confidence 899999888888888888887776532 2455555543 6999999999877 88999999997 999999865
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 336 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 336 (339)
.... ..+.......++.++.++.. ....+++++++++.++.+.+ +++++|+++++++|++.+.++... |++++
T Consensus 259 ~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 259 TPDP-APLRPGLLILKEIRIIGSIS---ATKADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred CCCC-cCCCHHHHHhCCcEEEEecC---CCHHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 3221 11233333345777666531 22456788999999997653 467899999999999999888766 88763
No 82
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.4e-31 Score=244.55 Aligned_cols=255 Identities=20% Similarity=0.225 Sum_probs=207.0
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
++|.++|+|++|+|++ .++.|++||+|+..
T Consensus 58 ~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~----------------------------------------------- 87 (329)
T cd08294 58 EGDTMIGTQVAKVIES---KNSKFPVGTIVVAS----------------------------------------------- 87 (329)
T ss_pred CCCcEecceEEEEEec---CCCCCCCCCEEEee-----------------------------------------------
Confidence 5789999999999995 44679999999531
Q ss_pred cccccccccceEEeecc---ceEEcCCCCC--c---cccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHH
Q 019535 100 HFVSVSSFSEYTVLDIA---HVVKVDPTVP--P---NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAE 170 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~---~~~~lp~~~~--~---~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~ 170 (339)
++|++|++++.+ .++++|++++ + ..+++++++++|||+++.+..+++++++|||+|+ |++|++++|
T Consensus 88 -----~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiq 162 (329)
T cd08294 88 -----FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQ 162 (329)
T ss_pred -----CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHH
Confidence 178999999999 9999999998 2 2234678899999999888899999999999985 999999999
Q ss_pred HHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcE
Q 019535 171 GARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 250 (339)
Q Consensus 171 la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~ 250 (339)
+|+.+|+ +|+++++++++.++++++|+++++++++ .++.+.+++++++++|++||++|+.. ++.++++++++ |+
T Consensus 163 lA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~---~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~-G~ 236 (329)
T cd08294 163 IAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT---VSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDF-GR 236 (329)
T ss_pred HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccC-CE
Confidence 9999999 8999999999999999999999999887 78888888877668999999999865 89999999997 99
Q ss_pred EEEeccCCCCC---c--ccccHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHH
Q 019535 251 TIVLGVDQPGS---Q--LSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFD 323 (339)
Q Consensus 251 ~v~~g~~~~~~---~--~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~ 323 (339)
++.+|...... . .......+..+++++.++....+. ..+.++++++++.++++.+. ...+|+++++.+|++
T Consensus 237 iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~ 314 (329)
T cd08294 237 VAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFI 314 (329)
T ss_pred EEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHH
Confidence 99998532111 1 122234556678888876543321 12236678899999988765 335699999999999
Q ss_pred HHhcCcee-EEEEEe
Q 019535 324 LLIKGKCL-RCVIWM 337 (339)
Q Consensus 324 ~~~~~~~~-kvvl~~ 337 (339)
.+.++... |+++++
T Consensus 315 ~~~~~~~~gkvvv~~ 329 (329)
T cd08294 315 GMLKGENTGKAIVKV 329 (329)
T ss_pred HHHcCCCCCeEEEeC
Confidence 99888766 998864
No 83
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.7e-31 Score=244.96 Aligned_cols=259 Identities=19% Similarity=0.227 Sum_probs=208.9
Q ss_pred CCCcccCCce--eEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 20 VFPRILGHEA--IGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 20 ~~P~i~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
..|+++|+++ .|.+..+|+.+++|++||+|.. +
T Consensus 66 ~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~----------------------------~----------------- 100 (338)
T cd08295 66 LPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWG----------------------------F----------------- 100 (338)
T ss_pred CCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEe----------------------------c-----------------
Confidence 5688999865 4555568888889999999942 1
Q ss_pred eecccccccccceEEeec-cceEEcC-CCCCcc-ccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHH
Q 019535 98 IHHFVSVSSFSEYTVLDI-AHVVKVD-PTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGAR 173 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~-~~~~~lp-~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~ 173 (339)
|+|+||+++++ +.++++| ++++++ +++.+++++.|||+++.+..+++++++|||+|+ |++|++++|+|+
T Consensus 101 -------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk 173 (338)
T cd08295 101 -------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAK 173 (338)
T ss_pred -------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHH
Confidence 28999999999 7999995 678887 788899999999998888889999999999987 999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEE
Q 019535 174 LCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 252 (339)
Q Consensus 174 ~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 252 (339)
.+|+ +|+++++++++.+++++ +|+++++++.+ ..++.+.+++.+++++|++||++|+.. +..++++++++ |+++
T Consensus 174 ~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~~~~~l~~~-G~iv 248 (338)
T cd08295 174 LKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE--EPDLDAALKRYFPNGIDIYFDNVGGKM-LDAVLLNMNLH-GRIA 248 (338)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC--cccHHHHHHHhCCCCcEEEEECCCHHH-HHHHHHHhccC-cEEE
Confidence 9999 89999999999999988 99999998654 136777787776559999999999855 89999999997 9999
Q ss_pred EeccCCCCCc----ccccHHHHhhcCCeEEeeecCCCCC--CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHh
Q 019535 253 VLGVDQPGSQ----LSLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI 326 (339)
Q Consensus 253 ~~g~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~ 326 (339)
.+|....... ...+...+..+++++.++....... .+.+.++++++.+|++++. +...|+++++.+|++.++
T Consensus 249 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~ 326 (338)
T cd08295 249 ACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLF 326 (338)
T ss_pred EecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHh
Confidence 9986432111 1123455666788888765433221 2346788999999987754 446699999999999998
Q ss_pred cCcee-EEEEEe
Q 019535 327 KGKCL-RCVIWM 337 (339)
Q Consensus 327 ~~~~~-kvvl~~ 337 (339)
++... |+|+++
T Consensus 327 ~~~~~GkvVl~~ 338 (338)
T cd08295 327 TGSNIGKQVVKV 338 (338)
T ss_pred cCCCCceEEEEC
Confidence 88766 999864
No 84
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=4.1e-31 Score=241.51 Aligned_cols=272 Identities=24% Similarity=0.329 Sum_probs=223.0
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeecc-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
..+|.++|||++|+|+++|++++++++||+|+..+ ..+|+.|..|..+.+++|....+ +|+..+|
T Consensus 56 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g----------- 121 (329)
T cd08298 56 PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYTVDG----------- 121 (329)
T ss_pred CCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccccCC-----------
Confidence 35688999999999999999999999999997654 36899999999999999987654 4544344
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 177 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~ 177 (339)
+|++|+.++.+.++++|+++++.+++.+++++.|||+++ +.++++++++|||+|+|++|++++++++..|.
T Consensus 122 --------~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~ 192 (329)
T cd08298 122 --------GYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA 192 (329)
T ss_pred --------ceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC
Confidence 899999999999999999999999999999999999987 88999999999999999999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|+++++++++.+.++++|++.+++.+. . ..+++|+++++.+....++.++++++++ |+++.+|..
T Consensus 193 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~ 258 (329)
T cd08298 193 -EVFAFTRSGEHQELARELGADWAGDSDD---L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIH 258 (329)
T ss_pred -eEEEEcCChHHHHHHHHhCCcEEeccCc---c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCC
Confidence 8999999999999999999988777654 1 1237999999877767799999999997 999998853
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 335 (339)
. .....+++.. +.++..+.++... ..+.+.+++++++++.+.+ . .++|+++++++|++.++++... |+++
T Consensus 259 ~-~~~~~~~~~~-~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 259 M-SDIPAFDYEL-LWGEKTIRSVANL---TRQDGEEFLKLAAEIPIKP--E-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred C-CCCCccchhh-hhCceEEEEecCC---CHHHHHHHHHHHHcCCCCc--e-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 2 1112233333 3346666655322 2346788899999997764 2 4889999999999999887765 7663
No 85
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=9e-31 Score=236.85 Aligned_cols=249 Identities=27% Similarity=0.436 Sum_probs=211.2
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
.+|.++|+|++|+|+++|++++.|++||+|+..+. .+|+.|++|..+.++.|..... +|....|
T Consensus 54 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------ 118 (306)
T cd08258 54 ETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQADG------------ 118 (306)
T ss_pred CCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCce---eeecCCC------------
Confidence 46889999999999999999999999999987764 6899999999999999976432 3433334
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
+|++|++++.+.++++|+++++++++ ++.++.++|+++....++.++++|||.|+|.+|++++|+|+.+|+
T Consensus 119 -------~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~- 189 (306)
T cd08258 119 -------GFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA- 189 (306)
T ss_pred -------ceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence 99999999999999999999999887 666889999998888889999999998889999999999999999
Q ss_pred EEEEEc--CChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 179 RIIGVD--VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 179 ~Vi~~~--~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+|+++. +++++.+.++++|++++ ++.. .++.+.+.+++.+ ++|++||++|+...+...+++++++ |+++.+|
T Consensus 190 ~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g 264 (306)
T cd08258 190 TVVVVGTEKDEVRLDVAKELGADAV-NGGE---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVG 264 (306)
T ss_pred EEEEECCCCCHHHHHHHHHhCCccc-CCCc---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEc
Confidence 787763 34557778888999877 7766 7888888888776 9999999998776689999999997 9999999
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCC
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 301 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g 301 (339)
... .....++...++.+++++.|++++. +++++++++++++|
T Consensus 265 ~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 265 IFG-PLAASIDVERIIQKELSVIGSRSST---PASWETALRLLASG 306 (306)
T ss_pred ccC-CCCcccCHHHHhhcCcEEEEEecCc---hHhHHHHHHHHhcC
Confidence 864 2345667777888999999998655 46799999998765
No 86
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.98 E-value=4.8e-30 Score=233.77 Aligned_cols=263 Identities=19% Similarity=0.227 Sum_probs=218.3
Q ss_pred CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
+..+|.++|||++|+|+++|++++.+++||+|+.... ...
T Consensus 56 ~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------------------------~~~------------ 95 (324)
T cd08244 56 PPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTG----------------------------RAG------------ 95 (324)
T ss_pred CCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccC----------------------------CCC------------
Confidence 3466889999999999999999999999999975321 011
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG 176 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G 176 (339)
|+|++|+.++.+.++++|+++++++++.+++++.||| ++.+.++++++++|+|+|+ |.+|.+++++|+.+|
T Consensus 96 -------g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g 167 (324)
T cd08244 96 -------GGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAG 167 (324)
T ss_pred -------ceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC
Confidence 3899999999999999999999999999999999995 4677888999999999985 999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+ +|+++++++++.+.++++|++.+++..+ .++.+.+.+.+++ ++|+++|++|+.. .+.++++++.+ |+++.+|
T Consensus 168 ~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g 241 (324)
T cd08244 168 A-TVVGAAGGPAKTALVRALGADVAVDYTR---PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYG 241 (324)
T ss_pred C-EEEEEeCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEe
Confidence 9 8999999999999999999988888877 6788888888877 8999999999887 78999999997 9999998
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL- 331 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~- 331 (339)
..... ...++...++.+++++.+........ .+.+.++++++.++.+.. ++++.|+++++++|++.+.++...
T Consensus 242 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~ 318 (324)
T cd08244 242 WASGE-WTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVG 318 (324)
T ss_pred cCCCC-CCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCc
Confidence 75432 23455455667888888775433211 234667888898887653 366899999999999999887766
Q ss_pred EEEEEe
Q 019535 332 RCVIWM 337 (339)
Q Consensus 332 kvvl~~ 337 (339)
|+++.+
T Consensus 319 kvv~~~ 324 (324)
T cd08244 319 KVLLLP 324 (324)
T ss_pred eEEEeC
Confidence 888764
No 87
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.97 E-value=5.4e-30 Score=233.32 Aligned_cols=260 Identities=20% Similarity=0.260 Sum_probs=218.5
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|++++.+++||+|+..+. .
T Consensus 54 ~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~------------------------------~------------- 90 (323)
T cd05282 54 PPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG------------------------------E------------- 90 (323)
T ss_pred CCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC------------------------------C-------------
Confidence 356889999999999999999999999999975320 1
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 177 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~ 177 (339)
|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++.....+.++++|||+|+ |.+|++++++|+.+|+
T Consensus 91 ------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~ 164 (323)
T cd05282 91 ------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF 164 (323)
T ss_pred ------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC
Confidence 389999999999999999999999999999999999998888888899999999987 8999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+++++.+++++.+.++++|++.++++.+ .++.+.+.+.+.+ ++|++|||+|+.. ....+++++++ |+++.+|.
T Consensus 165 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~ 238 (323)
T cd05282 165 -KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVKEATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGL 238 (323)
T ss_pred -eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHHHHhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEcc
Confidence 8999998999999999999999998876 6788888888887 9999999999977 67889999997 99999987
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCC-------CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~ 329 (339)
.... ...++...+..++.++.+.....+.. .+.+.++++++.++++.+. +++.|+++++++|++.+.++.
T Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~ 315 (323)
T cd05282 239 LSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPG 315 (323)
T ss_pred CCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCC
Confidence 5432 34455555555789988876554321 1246778889989977643 568899999999999998876
Q ss_pred ee-EEEEE
Q 019535 330 CL-RCVIW 336 (339)
Q Consensus 330 ~~-kvvl~ 336 (339)
.. |++++
T Consensus 316 ~~~kvv~~ 323 (323)
T cd05282 316 RGGKVLLT 323 (323)
T ss_pred CCceEeeC
Confidence 65 88763
No 88
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=2.3e-29 Score=230.28 Aligned_cols=278 Identities=23% Similarity=0.332 Sum_probs=227.0
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|+++++|++||+|+...+..|+.+.+| +|.... .+|...+|
T Consensus 56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~------~~~~~~---~~~~~~~g------------- 113 (336)
T cd08276 56 KDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPT------AEDEAS---ALGGPIDG------------- 113 (336)
T ss_pred CCCcccccceeEEEEEeCCCCcCCCCCCEEEEeccccccccccc------cccccc---ccccccCc-------------
Confidence 47889999999999999999999999999988776666554443 332211 13333333
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
+|++|+.++.+.++++|+++++.+++.+++++.+||+++.+...++++++|+|+|+|++|+++++++++.|+ +
T Consensus 114 ------~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~ 186 (336)
T cd08276 114 ------VLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-R 186 (336)
T ss_pred ------eeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-E
Confidence 899999999999999999999999999999999999988888889999999999889999999999999999 8
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+++++++++.+.++++|++.+++... ..++.+.+.+++.+ ++|++||+++... ...++++++++ |+++.+|...
T Consensus 187 v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~ 262 (336)
T cd08276 187 VIATSSSDEKLERAKALGADHVINYRT--TPDWGEEVLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLS 262 (336)
T ss_pred EEEEeCCHHHHHHHHHcCCCEEEcCCc--ccCHHHHHHHHcCCCCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCC
Confidence 999999999999998899888887653 13577788888887 9999999998665 88999999997 9999998653
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEEE
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 336 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 336 (339)
.. ........++.+++++.+...+. .+.+.++++++.++.+.+. .++.+++++++++++.+.++... |++++
T Consensus 263 ~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 263 GF-EAPVLLLPLLTKGATLRGIAVGS---RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred CC-ccCcCHHHHhhcceEEEEEecCc---HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 22 22345566678899998876543 3568888999988866543 55889999999999999877665 88875
No 89
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.97 E-value=1.1e-29 Score=232.38 Aligned_cols=263 Identities=22% Similarity=0.289 Sum_probs=215.2
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|++++.+++||+|+... .+
T Consensus 56 ~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~------------------------------~~------------- 92 (334)
T PTZ00354 56 PGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALL------------------------------PG------------- 92 (334)
T ss_pred CCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEec------------------------------CC-------------
Confidence 34567999999999999999999999999996421 11
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 177 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~ 177 (339)
|+|++|++++.+.++++|+++++.+++.+++++.|||+++.+...+.++++|||+|+ |++|++++++|+.+|+
T Consensus 93 ------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~ 166 (334)
T PTZ00354 93 ------GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA 166 (334)
T ss_pred ------CceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Confidence 289999999999999999999999999999999999998888788999999999986 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCcc-HHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS-VSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~-~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+++.+.+++++.+.++++|++++++... .+ +.+.+.+.+.+ ++|++||++++.. +..++++++++ |+++.++
T Consensus 167 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~i~~~ 240 (334)
T PTZ00354 167 -ATIITTSSEEKVDFCKKLAAIILIRYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETAEVLAVD-GKWIVYG 240 (334)
T ss_pred -EEEEEeCCHHHHHHHHHcCCcEEEecCC---hhHHHHHHHHHhCCCCceEEEECCchHH-HHHHHHHhccC-CeEEEEe
Confidence 7777888999999999999988888765 44 77888888876 9999999998765 88999999997 9999998
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCCCC--C-----CcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA--K-----SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG 328 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~-----~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~ 328 (339)
...+.....++...++.+..++.++....... + +.++++++++.++.+.+ ++.+.+++++++++++.+.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~ 318 (334)
T PTZ00354 241 FMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQN 318 (334)
T ss_pred cCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhC
Confidence 65322211156666666677888775443211 0 12366788888887654 366889999999999999877
Q ss_pred cee-EEEEEeC
Q 019535 329 KCL-RCVIWMG 338 (339)
Q Consensus 329 ~~~-kvvl~~~ 338 (339)
... |+++++.
T Consensus 319 ~~~~kvvv~~~ 329 (334)
T PTZ00354 319 KNIGKVVLTVN 329 (334)
T ss_pred CCCceEEEecC
Confidence 655 9998765
No 90
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=2.3e-29 Score=228.04 Aligned_cols=258 Identities=24% Similarity=0.357 Sum_probs=210.8
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 50 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------------------------- 83 (312)
T cd08269 50 AEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS---------------------------------------------- 83 (312)
T ss_pred CCCcccceeeEEEEEEECCCCcCCCCCCEEEEec----------------------------------------------
Confidence 3588999999999999999999999999997532
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
.|+|++|+.++++.++++|+++ ..++....+++++++++. ..+++++++|||+|+|.+|.+++++|+.+|+++
T Consensus 84 ----~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~ 156 (312)
T cd08269 84 ----GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARR 156 (312)
T ss_pred ----CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 1389999999999999999998 233322368889998765 788999999999988999999999999999933
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+++.+++++.+.++++|++++++.+. .++.+.+.+++.+ ++|++|||+|.......++++++++ |+++.+|...
T Consensus 157 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~ 232 (312)
T cd08269 157 VIAIDRRPARLALARELGATEVVTDDS---EAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ 232 (312)
T ss_pred EEEECCCHHHHHHHHHhCCceEecCCC---cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC
Confidence 999999898999889999988888766 6788888888877 9999999998877789999999997 9999998653
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCC-CCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce--eEEEE
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGL-KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC--LRCVI 335 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvl 335 (339)
.....+++..+..++.++.++..... ...+.+++++++++++.+.+..++.++|+++++++|++.+.++.. +|+++
T Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 233 -DGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred -CCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 23344555566677888776643322 123568889999999988765445688999999999999988854 48876
No 91
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.97 E-value=1.3e-29 Score=232.81 Aligned_cols=260 Identities=22% Similarity=0.272 Sum_probs=213.4
Q ss_pred CCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeec
Q 019535 21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH 100 (339)
Q Consensus 21 ~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 100 (339)
+|.++|||++|+|+++|++++.|++||+|+.... .
T Consensus 63 ~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-----------------------------~---------------- 97 (341)
T cd08290 63 PPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRP-----------------------------G---------------- 97 (341)
T ss_pred CCCCCCcceEEEEEEeCCCCCCCCCCCEEEecCC-----------------------------C----------------
Confidence 6889999999999999999999999999975321 0
Q ss_pred ccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 019535 101 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR 179 (339)
Q Consensus 101 ~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~ 179 (339)
.|+|++|+.++.+.++++|+++++++++.+++++.|||+++.....+.++++|||+|+ |++|++++|+|++.|+ +
T Consensus 98 ---~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~ 173 (341)
T cd08290 98 ---LGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-K 173 (341)
T ss_pred ---CccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-e
Confidence 1389999999999999999999999999999999999998877788899999999986 9999999999999999 7
Q ss_pred EEEEcCCh----hHHHHHHhcCCceEEeCCCCCCc---cHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEE
Q 019535 180 IIGVDVIS----EKFEIGKRFGVTEFVNSKNCGDK---SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 252 (339)
Q Consensus 180 Vi~~~~~~----~~~~~~~~~ga~~vi~~~~~~~~---~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 252 (339)
++++++++ ++.+.++++|++++++++. . ++.+.+..+..+++|++|||+|+.. +..++++++++ |+++
T Consensus 174 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v 248 (341)
T cd08290 174 TINVVRDRPDLEELKERLKALGADHVLTEEE---LRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMV 248 (341)
T ss_pred EEEEEcCCCcchhHHHHHHhcCCCEEEeCcc---cccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEE
Confidence 88887765 6688888899999998776 4 6777777776558999999999877 77899999997 9999
Q ss_pred EeccCCCCCcccccHHHHhhcCCeEEeeecCCCCC-------CCcHHHHHHHHhCCCCCCcccceeee---chhhHHHHH
Q 019535 253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEM---KFEEINSAF 322 (339)
Q Consensus 253 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~l~~g~l~~~~~i~~~~---~l~~~~~A~ 322 (339)
.+|.... ....++...++.++.++.+........ ...+..+++++.++.+.+. ...++ +++++++|+
T Consensus 249 ~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~ 325 (341)
T cd08290 249 TYGGMSG-QPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDAL 325 (341)
T ss_pred EEeccCC-CCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHH
Confidence 9986432 233455556677899998876443210 1146778889999987654 33566 999999999
Q ss_pred HHHhcCcee-EEEEEe
Q 019535 323 DLLIKGKCL-RCVIWM 337 (339)
Q Consensus 323 ~~~~~~~~~-kvvl~~ 337 (339)
+.+.++... |+|+++
T Consensus 326 ~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 326 ANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHhhcCCCCeEEEeC
Confidence 999887766 998875
No 92
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.97 E-value=1.9e-29 Score=231.19 Aligned_cols=259 Identities=17% Similarity=0.175 Sum_probs=204.9
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|++++.|++||+|+.... +...
T Consensus 56 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------------------~~~~------------- 95 (336)
T TIGR02817 56 AGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD---------------------------IDRP------------- 95 (336)
T ss_pred CCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCC---------------------------CCCC-------------
Confidence 357889999999999999999999999999964210 0111
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCC-----CCEEEEEcc-CHHHHHHHHHH
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGA 172 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~-----~~~VLI~G~-G~iG~~a~~la 172 (339)
|+|++|++++++.++++|+++++++++.+++++.|||+++....++.+ +++|||+|+ |++|++++|+|
T Consensus 96 ------g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~a 169 (336)
T TIGR02817 96 ------GSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLA 169 (336)
T ss_pred ------CcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 389999999999999999999999999999999999998878888876 999999986 99999999999
Q ss_pred HHc-CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEE
Q 019535 173 RLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT 251 (339)
Q Consensus 173 ~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~ 251 (339)
+.+ |+ +|+++++++++.+.++++|+++++++.. ++.+.+++..++++|+++|++++.......+++++++ |++
T Consensus 170 k~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~----~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~ 243 (336)
T TIGR02817 170 RQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK----PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRF 243 (336)
T ss_pred HHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC----CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEE
Confidence 998 99 8999999999999999999999988543 5677777754448999999987766689999999997 999
Q ss_pred EEeccCCCCCcccccHHHHhhcCCeEEeeecC--CCCC-------CCcHHHHHHHHhCCCCCCcccceeee---chhhHH
Q 019535 252 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG--GLKA-------KSDIPILLKRYMDKELELDKFVTHEM---KFEEIN 319 (339)
Q Consensus 252 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~-------~~~~~~~~~~l~~g~l~~~~~i~~~~---~l~~~~ 319 (339)
+.++.. ..++...+..+++++.+..+. .... ...+.++++++.++.+.+. +++.+ ++++++
T Consensus 244 v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~ 316 (336)
T TIGR02817 244 ALIDDP-----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLK 316 (336)
T ss_pred EEEccc-----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHH
Confidence 988532 133444455555666653322 1100 1236778899999977543 33445 478999
Q ss_pred HHHHHHhcCcee-EEEEE
Q 019535 320 SAFDLLIKGKCL-RCVIW 336 (339)
Q Consensus 320 ~A~~~~~~~~~~-kvvl~ 336 (339)
+|++.++++... |+++.
T Consensus 317 ~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 317 RAHALIESGKARGKIVLE 334 (336)
T ss_pred HHHHHHHcCCccceEEEe
Confidence 999999888765 87764
No 93
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.97 E-value=1.5e-29 Score=224.16 Aligned_cols=244 Identities=31% Similarity=0.450 Sum_probs=201.4
Q ss_pred CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
+..+|.++|||++|+|+++|++++.|++||+|+..+..+|+.|+.|+. .|+.... .+....|
T Consensus 26 ~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~g----------- 87 (271)
T cd05188 26 PPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCPGGGI---LGEGLDG----------- 87 (271)
T ss_pred CCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCCCCCE---eccccCC-----------
Confidence 346789999999999999999999999999999999999999999997 6654442 3333333
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 177 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~ 177 (339)
+|++|+.++.+.++++|+++++++++.+++++.|||+++.....+.++++|||+|+|++|++++++++..|.
T Consensus 88 --------~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~ 159 (271)
T cd05188 88 --------GFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA 159 (271)
T ss_pred --------cceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999988777777899999999986699999999999998
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+|+++++++++.+.++++|+..+++..+ .+..+.+. ...+ ++|++|++++.....+.++++++++ |+++.++.
T Consensus 160 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~~~ 233 (271)
T cd05188 160 -RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPG-GRIVVVGG 233 (271)
T ss_pred -eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEEcc
Confidence 9999999999999999999888888776 56666666 5555 8999999999855589999999997 99999987
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHH
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKR 297 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 297 (339)
...... .......+.+++++.++..... +++++++++
T Consensus 234 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 234 TSGGPP-LDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred CCCCCC-cccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 643322 2223456778999988865432 456666654
No 94
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.97 E-value=2.9e-29 Score=213.99 Aligned_cols=259 Identities=21% Similarity=0.235 Sum_probs=212.9
Q ss_pred CCcccCCceeEEEEEec--CCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 21 FPRILGHEAIGVVESVG--ENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 21 ~P~i~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
-|+-+|-..+|.++... |+...|++||.|+..
T Consensus 67 ~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~---------------------------------------------- 100 (340)
T COG2130 67 PPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV---------------------------------------------- 100 (340)
T ss_pred CCcCCCceeECCeeEEEEecCCCCCCCCCEEEec----------------------------------------------
Confidence 46667776666665543 456789999999642
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccc--cccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR--ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC 175 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~--aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~ 175 (339)
.+|+||..++.+.+.|+.+..-+.. ...+.++..|||.+|++..+++.|++|+|-|+ |++|..+.|+||..
T Consensus 101 ------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlk 174 (340)
T COG2130 101 ------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLK 174 (340)
T ss_pred ------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhh
Confidence 1899999999999999986533222 23477799999999999999999999999986 99999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 176 GATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 176 G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
|+ +|++++.+++|.+++++ +|.+.++|++. +++.+.+++.+..++|+.||++|++. ++..+..|+.. +|++.+
T Consensus 175 G~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d~~~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~C 248 (340)
T COG2130 175 GC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---EDFAQALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVC 248 (340)
T ss_pred CC-eEEEecCCHHHHHHHHHhcCCceeeecCc---ccHHHHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeee
Confidence 99 99999999999999988 99999999999 89999999999899999999999998 99999999997 999999
Q ss_pred ccCCC--C---CcccccHHHHhhcCCeEEeeecC-CCCC--CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHh
Q 019535 255 GVDQP--G---SQLSLSSFEVLHSGKILMGSLFG-GLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI 326 (339)
Q Consensus 255 g~~~~--~---~~~~~~~~~~~~~~~~i~~~~~~-~~~~--~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~ 326 (339)
|.... . ....-.+..++.+.+++.|+... .+.. .+-++++.+++++|+|+.+. +-+-+|+++++||.-+-
T Consensus 249 G~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl 326 (340)
T COG2130 249 GAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLL 326 (340)
T ss_pred eehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHh
Confidence 95321 1 11223344567778999998762 2221 13467889999999998874 44557999999999999
Q ss_pred cCcee-EEEEEeCC
Q 019535 327 KGKCL-RCVIWMGE 339 (339)
Q Consensus 327 ~~~~~-kvvl~~~~ 339 (339)
++++. |+|+++.+
T Consensus 327 ~G~N~GK~vvKv~~ 340 (340)
T COG2130 327 SGKNFGKLVVKVAD 340 (340)
T ss_pred cCCccceEEEEecC
Confidence 99988 99999864
No 95
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=5.7e-30 Score=231.92 Aligned_cols=227 Identities=22% Similarity=0.332 Sum_probs=176.8
Q ss_pred ccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhc------CCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535 105 SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA------NVEVGSTVVIFGL-GSIGLAVAEGARLCGA 177 (339)
Q Consensus 105 g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~------~~~~~~~VLI~G~-G~iG~~a~~la~~~G~ 177 (339)
|+|+||+++|+..++++|+++++++||++|+++.|||.++.... +++++++|||+|+ |++|++++|+|+..++
T Consensus 104 g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~ 183 (347)
T KOG1198|consen 104 GGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA 183 (347)
T ss_pred CceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC
Confidence 49999999999999999999999999999999999999999999 8999999999976 8999999999999995
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
..++++.++++.++++++|+++++|+++ .++.+++++.++++||+||||+|++. ......++... |+...++..
T Consensus 184 -~~v~t~~s~e~~~l~k~lGAd~vvdy~~---~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~~ 257 (347)
T KOG1198|consen 184 -IKVVTACSKEKLELVKKLGADEVVDYKD---ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGLV 257 (347)
T ss_pred -cEEEEEcccchHHHHHHcCCcEeecCCC---HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEec
Confidence 4555556899999999999999999999 99999999998449999999999986 67777777775 765555432
Q ss_pred CCC-Cccccc-----HHHHhhcCCeEEeee---cCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC
Q 019535 258 QPG-SQLSLS-----SFEVLHSGKILMGSL---FGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG 328 (339)
Q Consensus 258 ~~~-~~~~~~-----~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~ 328 (339)
.+. ...... ...+......+.+.. .......+.+..+.++++++++++ .+.+.||++++.+|++.++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp--~i~~~~p~~~~~ea~~~~~~~ 335 (347)
T KOG1198|consen 258 GDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKP--VIDSVYPFSQAKEAFEKLEKS 335 (347)
T ss_pred cccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccC--CcceeeeHHHHHHHHHHHhhc
Confidence 211 011111 000000011111111 111223456888999999996554 488999999999999999987
Q ss_pred cee-EEEEEeCC
Q 019535 329 KCL-RCVIWMGE 339 (339)
Q Consensus 329 ~~~-kvvl~~~~ 339 (339)
+.. |+++.+.+
T Consensus 336 ~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 336 HATGKVVLEKDV 347 (347)
T ss_pred CCcceEEEEecC
Confidence 766 99998753
No 96
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.97 E-value=3.2e-29 Score=228.82 Aligned_cols=263 Identities=17% Similarity=0.251 Sum_probs=209.5
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+.+|++++.+++||+|+... ..
T Consensus 55 ~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~-----------------------------~~-------------- 91 (327)
T PRK10754 55 PSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQ-----------------------------SA-------------- 91 (327)
T ss_pred CCCCCccCcceEEEEEEeCCCCCCCCCCCEEEECC-----------------------------CC--------------
Confidence 34688999999999999999999999999996311 00
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 177 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~ 177 (339)
.|+|++|+.++.+.++++|+++++++++.+++++.|||.++.....+.++++|+|+|+ |.+|++++++|+.+|+
T Consensus 92 -----~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~ 166 (327)
T PRK10754 92 -----LGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA 166 (327)
T ss_pred -----CcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC
Confidence 1389999999999999999999999999888899999998878788999999999975 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+|+++++++++.++++++|++.+++.+. .++.+.+++++.+ ++|++|||+++.. ....+++++++ |+++.+|.
T Consensus 167 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~ 240 (327)
T PRK10754 167 -KLIGTVGSAQKAQRAKKAGAWQVINYRE---ENIVERVKEITGGKKVRVVYDSVGKDT-WEASLDCLQRR-GLMVSFGN 240 (327)
T ss_pred -EEEEEeCCHHHHHHHHHCCCCEEEcCCC---CcHHHHHHHHcCCCCeEEEEECCcHHH-HHHHHHHhccC-CEEEEEcc
Confidence 8999999999999999999988888776 7788888998887 9999999999865 88899999997 99999986
Q ss_pred CCCCCcccccHHHHhhcCCeEE--eeecCCCCCCC----cHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce
Q 019535 257 DQPGSQLSLSSFEVLHSGKILM--GSLFGGLKAKS----DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC 330 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~----~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~ 330 (339)
... ....++...+..++.... ....+.....+ .+..+++++.++++.+..++.++|+++++.++++.++++..
T Consensus 241 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~ 319 (327)
T PRK10754 241 ASG-PVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRAT 319 (327)
T ss_pred CCC-CCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCC
Confidence 532 112233333333222111 11101111111 24567889999988765555689999999999999988776
Q ss_pred e-EEEEE
Q 019535 331 L-RCVIW 336 (339)
Q Consensus 331 ~-kvvl~ 336 (339)
. |+||.
T Consensus 320 ~~~~~~~ 326 (327)
T PRK10754 320 QGSSLLI 326 (327)
T ss_pred cceEEEe
Confidence 5 99985
No 97
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.5e-28 Score=222.06 Aligned_cols=250 Identities=20% Similarity=0.258 Sum_probs=203.4
Q ss_pred CCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeec
Q 019535 21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH 100 (339)
Q Consensus 21 ~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 100 (339)
.|.++|||++|+|+++|++++.|++||+|+... ..
T Consensus 51 ~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~------------------------------~~--------------- 85 (305)
T cd08270 51 DGAVPGWDAAGVVERAAADGSGPAVGARVVGLG------------------------------AM--------------- 85 (305)
T ss_pred CCCcccceeEEEEEEeCCCCCCCCCCCEEEEec------------------------------CC---------------
Confidence 478899999999999999999999999996421 11
Q ss_pred ccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 019535 101 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR 179 (339)
Q Consensus 101 ~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~ 179 (339)
|+|++|+.++.+.++++|+++++++++.+++.+.|||+++...... ++++|+|+|+ |++|++++++|+..|+ +
T Consensus 86 ----g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~ 159 (305)
T cd08270 86 ----GAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-H 159 (305)
T ss_pred ----cceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-E
Confidence 3899999999999999999999999999999999999987665545 5999999987 9999999999999999 8
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 259 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 259 (339)
|+.+++++++.+.++++|++.++.... ++..+++|+++|++|+.. ...++++++.+ |+++.+|...
T Consensus 160 v~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~- 225 (305)
T cd08270 160 VVAVVGSPARAEGLRELGAAEVVVGGS-----------ELSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS- 225 (305)
T ss_pred EEEEeCCHHHHHHHHHcCCcEEEeccc-----------cccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-
Confidence 999999999999999999876654322 122247999999999875 89999999997 9999998754
Q ss_pred CCcccccHHHHhh--cCCeEEeeecCC-CCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535 260 GSQLSLSSFEVLH--SGKILMGSLFGG-LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335 (339)
Q Consensus 260 ~~~~~~~~~~~~~--~~~~i~~~~~~~-~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 335 (339)
.....++...+.. ++.++.+..+.. ....+.+..+++++.++++.+. +.++++++++++|++.+.++... |+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi 303 (305)
T cd08270 226 GEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVL 303 (305)
T ss_pred CCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEE
Confidence 2333445555444 588888776543 1112457788999999988754 56899999999999999887766 9888
Q ss_pred Ee
Q 019535 336 WM 337 (339)
Q Consensus 336 ~~ 337 (339)
.+
T Consensus 304 ~~ 305 (305)
T cd08270 304 DV 305 (305)
T ss_pred eC
Confidence 64
No 98
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=2.3e-28 Score=221.99 Aligned_cols=261 Identities=24% Similarity=0.337 Sum_probs=205.7
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
...|.++|||++|+|+++|+ ..+++||+|+.... .++...+
T Consensus 54 ~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~------------------------~~~~~~~------------- 94 (320)
T cd08243 54 VKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMG------------------------GMGRTFD------------- 94 (320)
T ss_pred CCCCccccceeEEEEEEecC--CCCCCCCEEEEecC------------------------CCCCCCC-------------
Confidence 35678999999999999995 57999999975421 0111112
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 177 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~ 177 (339)
|+|++|+.+++..++++|+++++++++.+++++.|||+++.+..++.++++|||+|+ |++|++++|+|+.+|+
T Consensus 95 ------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~ 168 (320)
T cd08243 95 ------GSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA 168 (320)
T ss_pred ------cccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC
Confidence 389999999999999999999999999999999999998888888999999999987 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|+++++++++.+.++++|++++++. . .++.+.+.++ ++++|+++|++++.. ++.++++++++ |+++.+|..
T Consensus 169 -~v~~~~~~~~~~~~~~~~g~~~~~~~-~---~~~~~~i~~~-~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~ 240 (320)
T cd08243 169 -TVTATTRSPERAALLKELGADEVVID-D---GAIAEQLRAA-PGGFDKVLELVGTAT-LKDSLRHLRPG-GIVCMTGLL 240 (320)
T ss_pred -EEEEEeCCHHHHHHHHhcCCcEEEec-C---ccHHHHHHHh-CCCceEEEECCChHH-HHHHHHHhccC-CEEEEEccC
Confidence 89999999999999999999888754 3 4677777777 449999999999865 89999999997 999999864
Q ss_pred CCCCcc-cccHHHH--hhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535 258 QPGSQL-SLSSFEV--LHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 333 (339)
Q Consensus 258 ~~~~~~-~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv 333 (339)
...... ....... ..+++++.+....... .+.+.++++++.++.+.+. ..+.|+++++++|++.+.++... |+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~~kv 317 (320)
T cd08243 241 GGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-QTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMESNRAFGKV 317 (320)
T ss_pred CCCcccCCcchhhhhhhccceEEEecchhhhh-HHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHHHhCCCCCcE
Confidence 322111 1112222 2456666655432211 2347788899999977643 56889999999999999877665 77
Q ss_pred EE
Q 019535 334 VI 335 (339)
Q Consensus 334 vl 335 (339)
++
T Consensus 318 vv 319 (320)
T cd08243 318 VV 319 (320)
T ss_pred Ee
Confidence 65
No 99
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=2.7e-28 Score=217.54 Aligned_cols=247 Identities=27% Similarity=0.415 Sum_probs=197.1
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
-++|.++|||++|+|+++|+++++|++||+|+..
T Consensus 18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~---------------------------------------------- 51 (277)
T cd08255 18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---------------------------------------------- 51 (277)
T ss_pred CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec----------------------------------------------
Confidence 3699999999999999999999999999999642
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 178 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~ 178 (339)
+.|++|+.++.+.++++|+++++++++.+ +++.|||+++ ...++++++++||+|+|.+|++++++|+.+|++
T Consensus 52 ------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~ 123 (277)
T cd08255 52 ------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAR 123 (277)
T ss_pred ------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 16899999999999999999999998888 7899999976 578899999999998899999999999999994
Q ss_pred EEEEEcCChhHHHHHHhcC-CceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 179 RIIGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~g-a~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+|+++++++++.+.++++| ++.+++... ..+.+ ++|++||+++........+++++++ |+++.+|.
T Consensus 124 ~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~ 191 (277)
T cd08255 124 EVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGW 191 (277)
T ss_pred cEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEec
Confidence 3999999999999989998 555543321 12234 8999999998777789999999997 99999987
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCC---------CCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhc
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGL---------KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK 327 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~ 327 (339)
.... .......+..+..++.+...... ...+.++++++++.++.+.. .+.+.|+++++++|++.+.+
T Consensus 192 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~ 267 (277)
T cd08255 192 YGLK--PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYRLLFE 267 (277)
T ss_pred cCCC--ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHHHHHc
Confidence 5432 11122334445667766543321 11256889999999997554 35688999999999999987
Q ss_pred C--ceeEEEE
Q 019535 328 G--KCLRCVI 335 (339)
Q Consensus 328 ~--~~~kvvl 335 (339)
+ ...|+++
T Consensus 268 ~~~~~~k~~~ 277 (277)
T cd08255 268 DPPECLKVVL 277 (277)
T ss_pred CCccceeeeC
Confidence 7 3448764
No 100
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.97 E-value=7.9e-28 Score=219.47 Aligned_cols=263 Identities=18% Similarity=0.227 Sum_probs=199.2
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++| +++|++||+|+..+. .+|...+|
T Consensus 56 ~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~------------------------~~~~~~~g------------- 96 (326)
T cd08289 56 RYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSY------------------------DLGVSHHG------------- 96 (326)
T ss_pred CCCcCcccceeEEEEEcC--CCCCCCCCEEEEccc------------------------ccCCCCCC-------------
Confidence 568999999999999964 568999999976431 02222233
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhc--CC-CCCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA--NV-EVGSTVVIFGL-GSIGLAVAEGARLC 175 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~--~~-~~~~~VLI~G~-G~iG~~a~~la~~~ 175 (339)
+|++|+.++++.++++|+++++++++.+++++.||+.++.... .+ ..+++|||+|+ |.+|++++|+|+.+
T Consensus 97 ------~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~ 170 (326)
T cd08289 97 ------GYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKL 170 (326)
T ss_pred ------cceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHC
Confidence 9999999999999999999999999999999999998765432 23 34689999987 99999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
|+ +|+++++++++.+.++++|++++++.++ . ..+.+.++.++++|++||++|+.. ...++++++++ |+++.+|
T Consensus 171 g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~-~~~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~i~~g 243 (326)
T cd08289 171 GY-EVVASTGKADAADYLKKLGAKEVIPREE---L-QEESIKPLEKQRWAGAVDPVGGKT-LAYLLSTLQYG-GSVAVSG 243 (326)
T ss_pred CC-eEEEEecCHHHHHHHHHcCCCEEEcchh---H-HHHHHHhhccCCcCEEEECCcHHH-HHHHHHHhhcC-CEEEEEe
Confidence 99 8999999999999999999988888765 3 345566664348999999999865 89999999997 9999999
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCC---CcccceeeechhhHHHHHHHHhcCcee-
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE---LDKFVTHEMKFEEINSAFDLLIKGKCL- 331 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~---~~~~i~~~~~l~~~~~A~~~~~~~~~~- 331 (339)
... ....+++...++.+++++.+....... ......+++.+.. .+. ....+.++|+++++++|++.+.++...
T Consensus 244 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~g 320 (326)
T cd08289 244 LTG-GGEVETTVFPFILRGVNLLGIDSVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTG 320 (326)
T ss_pred ecC-CCCCCcchhhhhhccceEEEEEeEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccc
Confidence 753 223344455566778988887432110 1122233333322 121 112347999999999999999888776
Q ss_pred EEEEEe
Q 019535 332 RCVIWM 337 (339)
Q Consensus 332 kvvl~~ 337 (339)
|+++++
T Consensus 321 kvvv~~ 326 (326)
T cd08289 321 RTVVKL 326 (326)
T ss_pred eEEEeC
Confidence 888763
No 101
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=4.3e-28 Score=221.54 Aligned_cols=258 Identities=24% Similarity=0.287 Sum_probs=208.0
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 58 ~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~--------------------------------------------- 92 (329)
T cd08250 58 VKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMS--------------------------------------------- 92 (329)
T ss_pred CCCCcccCceeEEEEEEECCCCCCCCCCCEEEEec---------------------------------------------
Confidence 46788999999999999999999999999996421
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 177 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~ 177 (339)
.|+|++|+.++.+.++++|++ +.+++.+++++.|||+++.+..++.++++|+|+|+ |.+|++++++|+..|+
T Consensus 93 -----~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~ 165 (329)
T cd08250 93 -----FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC 165 (329)
T ss_pred -----CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC
Confidence 138999999999999999997 35677788899999998888788999999999986 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|+++++++++.+.++++|++.+++.++ .++.+.+.+..++++|++||++|+.. +..++++++++ |+++.+|..
T Consensus 166 -~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~vd~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~ 239 (329)
T cd08250 166 -HVIGTCSSDEKAEFLKSLGCDRPINYKT---EDLGEVLKKEYPKGVDVVYESVGGEM-FDTCVDNLALK-GRLIVIGFI 239 (329)
T ss_pred -eEEEEeCcHHHHHHHHHcCCceEEeCCC---ccHHHHHHHhcCCCCeEEEECCcHHH-HHHHHHHhccC-CeEEEEecc
Confidence 8999999999999999999988888776 56667776665458999999999755 89999999997 999999865
Q ss_pred CCCC---------cccccHHHHhhcCCeEEeeecCCCC--CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHh
Q 019535 258 QPGS---------QLSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI 326 (339)
Q Consensus 258 ~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~ 326 (339)
.... ...+. ...+.++.++.+....... ..+.+.++++++.++.+.+.....+.++++++++|++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~ 318 (329)
T cd08250 240 SGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLY 318 (329)
T ss_pred cCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHH
Confidence 3211 01222 2345678888877543221 1234677889998997766433446799999999999998
Q ss_pred cCcee-EEEE
Q 019535 327 KGKCL-RCVI 335 (339)
Q Consensus 327 ~~~~~-kvvl 335 (339)
++... |+++
T Consensus 319 ~~~~~~kvvv 328 (329)
T cd08250 319 SGKNIGKVVV 328 (329)
T ss_pred cCCCCceEEe
Confidence 87665 8776
No 102
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.96 E-value=1.2e-27 Score=216.68 Aligned_cols=260 Identities=22% Similarity=0.304 Sum_probs=213.9
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+.+|++++++++||+|+... ..
T Consensus 53 ~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~------------------------------~~-------------- 88 (320)
T cd05286 53 PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG------------------------------PP-------------- 88 (320)
T ss_pred CCCccCCcceeEEEEEECCCCCCCCCCCEEEEec------------------------------CC--------------
Confidence 4678999999999999999999999999996421 01
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 178 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~ 178 (339)
|+|++|+.++.+.++++|++++..+++.+++.+.++++++.+..++.++++|||+|+ |++|++++++++.+|+
T Consensus 89 -----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~- 162 (320)
T cd05286 89 -----GAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA- 162 (320)
T ss_pred -----CceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-
Confidence 389999999999999999999999999999999999998888888999999999995 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|+++++++++.+.++++|++++++..+ .++.+.+.+++.+ ++|++|+|+++.. ...++++++++ |+++.+|..
T Consensus 163 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~ 237 (320)
T cd05286 163 TVIGTVSSEEKAELARAAGADHVINYRD---EDFVERVREITGGRGVDVVYDGVGKDT-FEGSLDSLRPR-GTLVSFGNA 237 (320)
T ss_pred EEEEEcCCHHHHHHHHHCCCCEEEeCCc---hhHHHHHHHHcCCCCeeEEEECCCcHh-HHHHHHhhccC-cEEEEEecC
Confidence 8999999999999999999988888776 6788888888877 9999999999865 88999999997 999999865
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCCC-----CcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAK-----SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL- 331 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~- 331 (339)
... ...++...+..+++++.+......... +.+.++++++.++.+.+. .++.|+++++++|++.+.++...
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~ 314 (320)
T cd05286 238 SGP-VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTG 314 (320)
T ss_pred CCC-CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCc
Confidence 322 223444444467888876543322111 224567888888877654 56889999999999999887766
Q ss_pred EEEEEe
Q 019535 332 RCVIWM 337 (339)
Q Consensus 332 kvvl~~ 337 (339)
|+++.+
T Consensus 315 ~vv~~~ 320 (320)
T cd05286 315 KLLLIP 320 (320)
T ss_pred eEEEeC
Confidence 888753
No 103
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.96 E-value=8.9e-28 Score=218.91 Aligned_cols=261 Identities=20% Similarity=0.213 Sum_probs=199.4
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++ +++.+++||+|+..+. .+|+..+|
T Consensus 56 ~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~------------------------~~g~~~~g------------- 96 (325)
T cd05280 56 NYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGY------------------------DLGMNTDG------------- 96 (325)
T ss_pred CCCCccCcccEEEEEEe--CCCCCCCCCEEEEccc------------------------ccCCCCCc-------------
Confidence 46889999999999999 4668999999975421 03333333
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcC--CC-CCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN--VE-VGSTVVIFGL-GSIGLAVAEGARLC 175 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~--~~-~~~~VLI~G~-G~iG~~a~~la~~~ 175 (339)
+|++|+.++++.++++|+++++++++.+++.+.|||.++..... +. .+++|||+|+ |.+|++++++|+.+
T Consensus 97 ------~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~ 170 (325)
T cd05280 97 ------GFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKL 170 (325)
T ss_pred ------eeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHc
Confidence 89999999999999999999999999999999999998755433 34 3579999987 99999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
|+ +|+++++++++.+.++++|++++++.++ . ...+.+...+ ++|++||++++.. +..++++++++ |+++.+
T Consensus 171 g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~--~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~ 242 (325)
T cd05280 171 GY-TVVALTGKEEQADYLKSLGASEVLDRED---L--LDESKKPLLKARWAGAIDTVGGDV-LANLLKQTKYG-GVVASC 242 (325)
T ss_pred CC-EEEEEeCCHHHHHHHHhcCCcEEEcchh---H--HHHHHHHhcCCCccEEEECCchHH-HHHHHHhhcCC-CEEEEE
Confidence 99 7999999999999999999998887654 2 2223333344 8999999999865 99999999997 999999
Q ss_pred ccCCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535 255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 331 (339)
Q Consensus 255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~ 331 (339)
|..... ...++...++.+++++.+........ .+.++.+.+++..+.. ..+..+|+++++++|++.+.++...
T Consensus 243 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~ 318 (325)
T cd05280 243 GNAAGP-ELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLL---EIVVREISLEELPEAIDRLLAGKHR 318 (325)
T ss_pred ecCCCC-ccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCc---cceeeEecHHHHHHHHHHHhcCCcc
Confidence 875322 22444445556788888765443221 0123344444555522 2356899999999999999888766
Q ss_pred -EEEEEe
Q 019535 332 -RCVIWM 337 (339)
Q Consensus 332 -kvvl~~ 337 (339)
|+++++
T Consensus 319 gk~vv~~ 325 (325)
T cd05280 319 GRTVVKI 325 (325)
T ss_pred eEEEEeC
Confidence 988864
No 104
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.96 E-value=8.4e-28 Score=220.60 Aligned_cols=261 Identities=23% Similarity=0.314 Sum_probs=204.9
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+.+|++++.+++||+|+..+...|+ +...+
T Consensus 53 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~----------------------~~~~~-------------- 96 (339)
T cd08249 53 SYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNP----------------------NDPRN-------------- 96 (339)
T ss_pred CCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccC----------------------CCCCC--------------
Confidence 468899999999999999999999999999865432221 00112
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCC----------CCCCEEEEEcc-CHHHHHH
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV----------EVGSTVVIFGL-GSIGLAV 168 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~----------~~~~~VLI~G~-G~iG~~a 168 (339)
|+|++|++++.+.++++|+++++++++.+++++.|||+++.+..++ .++++|||+|+ |.+|+++
T Consensus 97 -----g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~ 171 (339)
T cd08249 97 -----GAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLA 171 (339)
T ss_pred -----CcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHH
Confidence 3899999999999999999999999999999999999987666544 68999999997 8999999
Q ss_pred HHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhc--
Q 019535 169 AEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK-- 246 (339)
Q Consensus 169 ~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~-- 246 (339)
+++|+.+|+ +|+++. ++++.+.++++|++++++..+ .++.+.+++++++++|++||++|++..+..+++++++
T Consensus 172 ~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~ 246 (339)
T cd08249 172 IQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHD---PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSG 246 (339)
T ss_pred HHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCC---chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccC
Confidence 999999999 888887 568888999999999999877 7788888877766999999999985559999999999
Q ss_pred CCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCC---------CCCCCcHHHHHHHHhCCCCCCcccceeeec--h
Q 019535 247 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG---------LKAKSDIPILLKRYMDKELELDKFVTHEMK--F 315 (339)
Q Consensus 247 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~--l 315 (339)
+ |+++.+|...... .+ ..+.++....... ......+..+++++.++++.+. ....++ +
T Consensus 247 ~-g~~v~~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~ 315 (339)
T cd08249 247 G-GKLVSLLPVPEET--EP------RKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGL 315 (339)
T ss_pred C-CEEEEecCCCccc--cC------CCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcH
Confidence 9 9999998653221 00 1122222211111 1112346678889999988765 235567 9
Q ss_pred hhHHHHHHHHhcCc-ee-EEEEEe
Q 019535 316 EEINSAFDLLIKGK-CL-RCVIWM 337 (339)
Q Consensus 316 ~~~~~A~~~~~~~~-~~-kvvl~~ 337 (339)
+++++|++.+.++. .. |+|+++
T Consensus 316 ~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 316 EGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHHHHHHCCCccceEEEEeC
Confidence 99999999998887 65 999864
No 105
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.96 E-value=3.3e-27 Score=215.11 Aligned_cols=261 Identities=20% Similarity=0.220 Sum_probs=201.3
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|++ +++..|++||+|+.... ..|...+|
T Consensus 54 ~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~------------------------~~~~~~~g------------ 95 (323)
T TIGR02823 54 RSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGY------------------------GLGVSHDG------------ 95 (323)
T ss_pred CCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccC------------------------CCCCCCCc------------
Confidence 35689999999999998 56778999999975421 02222223
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHh--cCCCCCC-EEEEEcc-CHHHHHHHHHHHH
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGS-TVVIFGL-GSIGLAVAEGARL 174 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~--~~~~~~~-~VLI~G~-G~iG~~a~~la~~ 174 (339)
++++|+.++.+.++++|+++++++++.+++.+.+|+.++... .++.+++ +|||+|+ |.+|++++++|+.
T Consensus 96 -------~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~ 168 (323)
T TIGR02823 96 -------GYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSK 168 (323)
T ss_pred -------cceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998876433 3478888 9999997 9999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 175 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 175 ~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
+|+ ++++++.++++.+.++++|++.+++.++ .+. .++.+..+++|+++||+|+.. +..++++++++ |+++.+
T Consensus 169 ~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~--~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~ 240 (323)
T TIGR02823 169 LGY-EVVASTGKAEEEDYLKELGASEVIDRED---LSP--PGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAAC 240 (323)
T ss_pred cCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc---HHH--HHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEE
Confidence 999 7888888888889999999988887654 222 444554447999999999876 88999999997 999999
Q ss_pred ccCCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535 255 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 331 (339)
Q Consensus 255 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~ 331 (339)
|... ......+...++.++.++.+........ .+.+..+.+++..+.+.. + .+.|+++++++|++.+.++...
T Consensus 241 g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~ 316 (323)
T TIGR02823 241 GLAG-GPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHR 316 (323)
T ss_pred cccC-CCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCcc
Confidence 9753 2233444455657788888865332111 112455666666776543 3 4689999999999999888766
Q ss_pred -EEEEE
Q 019535 332 -RCVIW 336 (339)
Q Consensus 332 -kvvl~ 336 (339)
|++++
T Consensus 317 ~k~vv~ 322 (323)
T TIGR02823 317 GRTVVD 322 (323)
T ss_pred ceEEEe
Confidence 88875
No 106
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.96 E-value=3.7e-27 Score=212.23 Aligned_cols=260 Identities=23% Similarity=0.315 Sum_probs=206.9
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
+.+|.++|||++|+|+++|++++++++||+|+..... .+
T Consensus 35 ~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~----------------------------~~------------- 73 (303)
T cd08251 35 PPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE----------------------------SM------------- 73 (303)
T ss_pred CCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------------------------CC-------------
Confidence 4678899999999999999999999999999753210 11
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 177 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~ 177 (339)
|+|++|++++++.++++|+++++++++.+++++.|||+++ +..+++++++++|+|+ |.+|++++|+++.+|+
T Consensus 74 ------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~ 146 (303)
T cd08251 74 ------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA 146 (303)
T ss_pred ------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC
Confidence 3899999999999999999999999999999999999976 5788999999999965 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+|+++++++++.+.++++|++.+++... .++.+.+.+++.+ ++|+++|++++.. ....+++++++ |+++.+|.
T Consensus 147 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~ 220 (303)
T cd08251 147 -EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRGVDVVINTLSGEA-IQKGLNCLAPG-GRYVEIAM 220 (303)
T ss_pred -EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHHhccC-cEEEEEec
Confidence 8999999999999999999999998877 6788888888887 9999999998655 88999999997 99999976
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCC------CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC 330 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~ 330 (339)
........+....+ .++..+....+.... ..+.+.++++++.++.+.+ +.++.|++++++++++.+.++..
T Consensus 221 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 297 (303)
T cd08251 221 TALKSAPSVDLSVL-SNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRP--TVSRIFPFDDIGEAYRYLSDREN 297 (303)
T ss_pred cCCCccCccChhHh-hcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccC--CCceEEcHHHHHHHHHHHHhCCC
Confidence 43222222333332 224444332211110 1123667888888887654 35688999999999999987766
Q ss_pred e-EEEE
Q 019535 331 L-RCVI 335 (339)
Q Consensus 331 ~-kvvl 335 (339)
. |+++
T Consensus 298 ~~~iv~ 303 (303)
T cd08251 298 IGKVVV 303 (303)
T ss_pred cceEeC
Confidence 5 7663
No 107
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.96 E-value=4.4e-27 Score=215.43 Aligned_cols=261 Identities=20% Similarity=0.173 Sum_probs=207.3
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
++|.++|||++|+|+++|+++..|++||+|..... +..+
T Consensus 58 ~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---------------------------~~~~-------------- 96 (336)
T cd08252 58 GQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGD---------------------------ITRP-------------- 96 (336)
T ss_pred CCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCC---------------------------CCCC--------------
Confidence 46789999999999999999999999999964210 0112
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCC-----CCEEEEEcc-CHHHHHHHHHHH
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGAR 173 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~-----~~~VLI~G~-G~iG~~a~~la~ 173 (339)
|+|++|+.++.+.++++|+++++++++.+++++.|||+++.+..++.+ +++|+|+|+ |.+|++++++|+
T Consensus 97 -----g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~ 171 (336)
T cd08252 97 -----GSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAK 171 (336)
T ss_pred -----ccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHH
Confidence 389999999999999999999999999999999999998878888877 999999985 999999999999
Q ss_pred HcC-CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEE
Q 019535 174 LCG-ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 252 (339)
Q Consensus 174 ~~G-~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 252 (339)
.+| + +|+++++++++.+.++++|++++++... ++.+.+.....+++|++||+++....+..++++++.+ |+++
T Consensus 172 ~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v 245 (336)
T cd08252 172 QLTGL-TVIATASRPESIAWVKELGADHVINHHQ----DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHIC 245 (336)
T ss_pred HcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc----cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEE
Confidence 999 7 8999999999999999999988887653 4556665443348999999999766699999999997 9999
Q ss_pred EeccCCCCCcccccHHHHhhcCCeEEeeecCCCC--C-------CCcHHHHHHHHhCCCCCCccc-ceeeechhhHHHHH
Q 019535 253 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK--A-------KSDIPILLKRYMDKELELDKF-VTHEMKFEEINSAF 322 (339)
Q Consensus 253 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~-------~~~~~~~~~~l~~g~l~~~~~-i~~~~~l~~~~~A~ 322 (339)
.+|... ..++...+..++.++.+..+.... . .+.+.++++++.++.+.+... ..+.++++++++|+
T Consensus 246 ~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~ 321 (336)
T cd08252 246 LIVDPQ----EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAH 321 (336)
T ss_pred EecCCC----CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHH
Confidence 998642 233444444567887765433210 1 123677889999997764311 12457999999999
Q ss_pred HHHhcCcee-EEEEE
Q 019535 323 DLLIKGKCL-RCVIW 336 (339)
Q Consensus 323 ~~~~~~~~~-kvvl~ 336 (339)
+.+.++... |++++
T Consensus 322 ~~~~~~~~~~~vv~~ 336 (336)
T cd08252 322 ALLESGKTIGKIVLE 336 (336)
T ss_pred HHHHcCCccceEEeC
Confidence 999888766 88763
No 108
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.96 E-value=7.3e-27 Score=211.86 Aligned_cols=259 Identities=21% Similarity=0.293 Sum_probs=213.0
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|++++.+++||+|+... .+
T Consensus 55 ~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~------------------------------~~------------- 91 (323)
T cd05276 55 PGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALL------------------------------AG------------- 91 (323)
T ss_pred CCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEec------------------------------CC-------------
Confidence 35688999999999999999999999999996431 11
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 177 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~ 177 (339)
|+|++|+.++.+.++++|+++++.+++.++.++.++|+++.+...+.++++|+|+|+ |.+|++++++++..|+
T Consensus 92 ------g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~ 165 (323)
T cd05276 92 ------GGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA 165 (323)
T ss_pred ------CceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC
Confidence 289999999999999999999999999999999999998888788999999999986 8999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+|+++.+++++.+.++++|++.+++... .++.+.+.+.+.+ ++|++|+++|+.. ....++++.++ |+++.+|.
T Consensus 166 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~ 239 (323)
T cd05276 166 -RVIATAGSEEKLEACRALGADVAINYRT---EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGL 239 (323)
T ss_pred -EEEEEcCCHHHHHHHHHcCCCEEEeCCc---hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEec
Confidence 8999999889999998899888888776 6777888887766 8999999999877 88899999997 99999986
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCCC-------CcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAK-------SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~ 329 (339)
.... ...++...++.+++++.+......... ..+.++++++.++++.+ +.++.|+++++++|++.+.++.
T Consensus 240 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~ 316 (323)
T cd05276 240 LGGA-KAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNE 316 (323)
T ss_pred CCCC-CCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCC
Confidence 5322 234455555567888888765442111 12456778888887653 3668999999999999998776
Q ss_pred ee-EEEE
Q 019535 330 CL-RCVI 335 (339)
Q Consensus 330 ~~-kvvl 335 (339)
.. |+++
T Consensus 317 ~~~kvv~ 323 (323)
T cd05276 317 HIGKIVL 323 (323)
T ss_pred CcceEeC
Confidence 55 7653
No 109
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=4e-27 Score=210.08 Aligned_cols=255 Identities=22% Similarity=0.305 Sum_probs=205.9
Q ss_pred CCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeec
Q 019535 21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH 100 (339)
Q Consensus 21 ~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 100 (339)
.|.++|||++|+|+++|++++.|++||+|+...
T Consensus 23 ~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------------------------------- 55 (288)
T smart00829 23 GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------------------------------- 55 (288)
T ss_pred CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------------------------------
Confidence 468999999999999999999999999996431
Q ss_pred ccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 019535 101 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR 179 (339)
Q Consensus 101 ~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~ 179 (339)
.|+|++|+.++.+.++++|+++++++++.+++++.|+|.++.+...+.++++|+|+|+ |.+|++++++++..|+ +
T Consensus 56 ---~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~-~ 131 (288)
T smart00829 56 ---PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGA-E 131 (288)
T ss_pred ---CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-E
Confidence 1389999999999999999999999999999999999998878888999999999985 9999999999999999 8
Q ss_pred EEEEcCChhHHHHHHhcCC--ceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 180 IIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga--~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
|+++++++++.+.++++|+ +.++++.. .++.+.+.+.+.+ ++|+++|++++.. ...++++++++ |+++.+|.
T Consensus 132 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~ 206 (288)
T smart00829 132 VFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNSLAGEF-LDASLRCLAPG-GRFVEIGK 206 (288)
T ss_pred EEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeCCCHHH-HHHHHHhccCC-cEEEEEcC
Confidence 9999999999999999998 77888776 6778888888777 8999999999654 88999999997 99999986
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCC-----CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLK-----AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 331 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~ 331 (339)
........++... +.+++++.+..+.... ..+.+.++++++.++++.+. ..+.|++++++++++.+..+...
T Consensus 207 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 283 (288)
T smart00829 207 RDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDVEDAFRYMQQGKHI 283 (288)
T ss_pred cCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHHHHHHHHHhcCCCc
Confidence 4321122233333 3456666654322110 11235678888888876543 45789999999999999887654
Q ss_pred -EEE
Q 019535 332 -RCV 334 (339)
Q Consensus 332 -kvv 334 (339)
|++
T Consensus 284 ~~iv 287 (288)
T smart00829 284 GKVV 287 (288)
T ss_pred ceEe
Confidence 665
No 110
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.96 E-value=5.6e-27 Score=214.12 Aligned_cols=253 Identities=21% Similarity=0.251 Sum_probs=203.2
Q ss_pred CCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeec
Q 019535 21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH 100 (339)
Q Consensus 21 ~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 100 (339)
.+.++|+|++|+|+++|++ ++++||+|+..
T Consensus 64 ~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~------------------------------------------------ 93 (329)
T cd05288 64 LGEPMRGGGVGEVVESRSP--DFKVGDLVSGF------------------------------------------------ 93 (329)
T ss_pred CCCcccCceEEEEEecCCC--CCCCCCEEecc------------------------------------------------
Confidence 4668999999999999964 79999999531
Q ss_pred ccccccccceEEeec-cceEEcCCCCC--cccccc-ccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535 101 FVSVSSFSEYTVLDI-AHVVKVDPTVP--PNRACL-LSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC 175 (339)
Q Consensus 101 ~~~~g~~~~~~~~~~-~~~~~lp~~~~--~~~aa~-l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~ 175 (339)
++|++|+.++. +.++++|++++ +.+++. +++++.|||+++.+...+.++++|||+|+ |.+|++++++|+..
T Consensus 94 ----~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~ 169 (329)
T cd05288 94 ----LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLL 169 (329)
T ss_pred ----cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHc
Confidence 17999999999 99999999995 445555 88899999998878788899999999985 99999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 176 GATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 176 G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
|+ +|+++++++++.+.+++ +|+++++++++ .++.+.+.+++.+++|++|||+|+.. ++.++++++++ |+++.+
T Consensus 170 G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~ 243 (329)
T cd05288 170 GA-RVVGIAGSDEKCRWLVEELGFDAAINYKT---PDLAEALKEAAPDGIDVYFDNVGGEI-LDAALTLLNKG-GRIALC 243 (329)
T ss_pred CC-EEEEEeCCHHHHHHHHhhcCCceEEecCC---hhHHHHHHHhccCCceEEEEcchHHH-HHHHHHhcCCC-ceEEEE
Confidence 99 89999999999999988 99989998877 67788888877558999999999865 99999999997 999999
Q ss_pred ccCCCCCcc----cccHHHHhhcCCeEEeeecCCCCC--CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC
Q 019535 255 GVDQPGSQL----SLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG 328 (339)
Q Consensus 255 g~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~ 328 (339)
|........ .++....+.++.++.+........ .+.+.++++++.++.+.+.. ...++++++.++++.+.++
T Consensus 244 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~ 321 (329)
T cd05288 244 GAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTG 321 (329)
T ss_pred eeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcC
Confidence 865322211 123444566788888765433211 13467788999999877653 3568999999999999877
Q ss_pred cee-EEEE
Q 019535 329 KCL-RCVI 335 (339)
Q Consensus 329 ~~~-kvvl 335 (339)
... |+++
T Consensus 322 ~~~gkvvv 329 (329)
T cd05288 322 KNTGKLVV 329 (329)
T ss_pred CCccceeC
Confidence 655 7663
No 111
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.96 E-value=1.7e-26 Score=209.83 Aligned_cols=265 Identities=24% Similarity=0.341 Sum_probs=213.2
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|++++.|++||+|+..+.. .+ ...
T Consensus 55 ~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~------------------------~~-~~~------------- 96 (325)
T cd08253 55 PPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLG------------------------WG-RRQ------------- 96 (325)
T ss_pred CCCCeecccceEEEEEeeCCCCCCCCCCCEEEEeccc------------------------cC-CCC-------------
Confidence 4578899999999999999999999999999764310 00 011
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 177 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~ 177 (339)
|++++|+.++.+.++++|+++++++++.+++++.+||+++.+..++.++++++|+|+ |.+|++++++++..|+
T Consensus 97 ------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~ 170 (325)
T cd08253 97 ------GTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA 170 (325)
T ss_pred ------cceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Confidence 389999999999999999999999999999999999998888788999999999986 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 178 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 178 ~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+|+++++++++.+.++++|++.+++... .++.+.+.+++.+ ++|+++++++... ....+++++.+ |+++.++.
T Consensus 171 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~ 244 (325)
T cd08253 171 -RVIATASSAEGAELVRQAGADAVFNYRA---EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGS 244 (325)
T ss_pred -EEEEEeCCHHHHHHHHHcCCCEEEeCCC---cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEee
Confidence 8999999999999998899988888776 6777888887776 9999999999876 78889999997 99999987
Q ss_pred CCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-E
Q 019535 257 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R 332 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k 332 (339)
.. ....+++..++.++.++.+........ .+.+..+.+++.++.+.+ +.++.|++++++++++.+.++... |
T Consensus 245 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~k 320 (325)
T cd08253 245 GG--LRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGK 320 (325)
T ss_pred cC--CcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcce
Confidence 53 223344444556677776654322110 112445666777776543 356889999999999999887666 8
Q ss_pred EEEEe
Q 019535 333 CVIWM 337 (339)
Q Consensus 333 vvl~~ 337 (339)
+++++
T Consensus 321 vv~~~ 325 (325)
T cd08253 321 VVLDP 325 (325)
T ss_pred EEEeC
Confidence 88753
No 112
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.96 E-value=1e-26 Score=211.40 Aligned_cols=260 Identities=20% Similarity=0.254 Sum_probs=213.8
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+.+|++++.+++||+|+... .+
T Consensus 56 ~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~------------------------------~~-------------- 91 (325)
T TIGR02824 56 GASDILGLEVAGEVVAVGEGVSRWKVGDRVCALV------------------------------AG-------------- 91 (325)
T ss_pred CCCCCccceeEEEEEEeCCCCCCCCCCCEEEEcc------------------------------CC--------------
Confidence 4578999999999999999999999999996421 11
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 178 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~ 178 (339)
|+|++|+.++.+.++++|+++++.+++.+++++.|+|+++.+...+.++++++|+|+ |++|++++++++..|+
T Consensus 92 -----~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~- 165 (325)
T TIGR02824 92 -----GGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA- 165 (325)
T ss_pred -----CcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-
Confidence 289999999999999999999999999999999999998888889999999999986 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|+++.+++++.+.++.+|++.+++... .++.+.+.+...+ ++|++++++++.. +..++++++++ |+++.+|..
T Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~v~~g~~ 240 (325)
T TIGR02824 166 RVFTTAGSDEKCAACEALGADIAINYRE---EDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIKALALD-GRIVQIGFQ 240 (325)
T ss_pred EEEEEeCCHHHHHHHHHcCCcEEEecCc---hhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHHhhccC-cEEEEEecC
Confidence 8999998998888888899888887766 6677788887776 8999999999865 88999999997 999999865
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCC-------CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCce
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC 330 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~ 330 (339)
..... .+++..++.+++++.+........ ...+.++++++.++.+.+ +.++.++++++.++++.+.++..
T Consensus 241 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~ 317 (325)
T TIGR02824 241 GGRKA-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDH 317 (325)
T ss_pred CCCcC-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCC
Confidence 32222 455555657899998876444211 112456778888887653 35688999999999999887766
Q ss_pred e-EEEEEe
Q 019535 331 L-RCVIWM 337 (339)
Q Consensus 331 ~-kvvl~~ 337 (339)
. |+++++
T Consensus 318 ~~~~v~~~ 325 (325)
T TIGR02824 318 IGKIVLTV 325 (325)
T ss_pred cceEEEeC
Confidence 5 888753
No 113
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=2.4e-26 Score=209.12 Aligned_cols=264 Identities=25% Similarity=0.320 Sum_probs=211.8
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+.+|++++.|++||+|+..+. .++..+
T Consensus 56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-------------------------~~~~~~-------------- 96 (328)
T cd08268 56 PLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPA-------------------------ADLGQY-------------- 96 (328)
T ss_pred CCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccc-------------------------cccCCC--------------
Confidence 45889999999999999999999999999976432 111112
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 178 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~ 178 (339)
|.+++|+.++.+.++++|+++++++++.+++++.++|.++.....+.++++++|+|+ |.+|++++++++..|+
T Consensus 97 -----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~- 170 (328)
T cd08268 97 -----GTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA- 170 (328)
T ss_pred -----ccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-
Confidence 389999999999999999999999999999999999998888888999999999987 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+++.+++++++.+.++++|...+++.+. ..+.+.+.+.+.+ ++|++++++++.. ...++++++++ |+++.+|..
T Consensus 171 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~ 245 (328)
T cd08268 171 TVIATTRTSEKRDALLALGAAHVIVTDE---EDLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGAL 245 (328)
T ss_pred EEEEEcCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHhCCCCceEEEECCchHh-HHHHHHhhccC-CEEEEEEeC
Confidence 8999998999999998899888888776 6777778887776 8999999999865 88999999997 999999865
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCC-CCC----cHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLK-AKS----DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL- 331 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~----~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~- 331 (339)
.. ....++....+.+++++.+....... ..+ .+..+.+++.++.+.+. .+..|+++++.++++.+.++...
T Consensus 246 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 322 (328)
T cd08268 246 SG-EPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEAHRYLESGQQIG 322 (328)
T ss_pred CC-CCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHHHHHHHcCCCCc
Confidence 32 22234444456778888776543211 111 23445556667765543 56889999999999999877665
Q ss_pred EEEEE
Q 019535 332 RCVIW 336 (339)
Q Consensus 332 kvvl~ 336 (339)
|++++
T Consensus 323 ~vv~~ 327 (328)
T cd08268 323 KIVVT 327 (328)
T ss_pred eEEEe
Confidence 88875
No 114
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.95 E-value=1.2e-26 Score=207.19 Aligned_cols=257 Identities=22% Similarity=0.258 Sum_probs=207.6
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|++++.+++||+|+... .
T Consensus 26 ~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-------------------------------~-------------- 60 (293)
T cd05195 26 GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-------------------------------P-------------- 60 (293)
T ss_pred CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------------------c--------------
Confidence 4688999999999999999999999999996531 1
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 178 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~ 178 (339)
|+|++|+.++.+.++++|+++++.+++.+++++.|++.++.+...++++++|+|+|+ |.+|++++++++..|+
T Consensus 61 -----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~- 134 (293)
T cd05195 61 -----GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA- 134 (293)
T ss_pred -----CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCC-
Confidence 389999999999999999999999999999999999998888888999999999975 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcC--CceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 179 RIIGVDVISEKFEIGKRFG--VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~g--a~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+++++++++++.+.++.+| ++.+++... .++.+.+.+.+.+ ++|++++++++.. ++.++++++++ |+++.+|
T Consensus 135 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g 209 (293)
T cd05195 135 EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVLNSLSGEL-LRASWRCLAPF-GRFVEIG 209 (293)
T ss_pred EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEEeCCCchH-HHHHHHhcccC-ceEEEee
Confidence 8999998889999998887 677888766 6788888888877 9999999999885 99999999997 9999998
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCCC------CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCc
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 329 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~ 329 (339)
.........+.... +.++.++....+.... ..+.+.++++++.++++. ++.+..++++++.++++.+.++.
T Consensus 210 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~ 286 (293)
T cd05195 210 KRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PLPPTVVPSASEIDAFRLMQSGK 286 (293)
T ss_pred ccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cCCCeeechhhHHHHHHHHhcCC
Confidence 65322111222222 3345666554322211 112467788888888765 34567899999999999998876
Q ss_pred ee-EEEE
Q 019535 330 CL-RCVI 335 (339)
Q Consensus 330 ~~-kvvl 335 (339)
.. |+++
T Consensus 287 ~~~~ivv 293 (293)
T cd05195 287 HIGKVVL 293 (293)
T ss_pred CCceecC
Confidence 65 7653
No 115
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=8.8e-28 Score=232.44 Aligned_cols=271 Identities=20% Similarity=0.202 Sum_probs=224.4
Q ss_pred CCCCCCCcCCCCCcccCC-CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCC
Q 019535 2 DIEKPSNKTAGKPIQCRA-VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP 80 (339)
Q Consensus 2 ~~~~~~~~~~g~~~~~~~-~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~ 80 (339)
|||..|.+..-+..+-+. ..-.++|-||+|+ .+-|.|| +
T Consensus 1460 DiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv------------------------------M 1499 (2376)
T KOG1202|consen 1460 DIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV------------------------------M 1499 (2376)
T ss_pred HHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE------------------------------E
Confidence 788888777766554433 3446899999996 3459999 4
Q ss_pred CCCCCCcccccccCCceeecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEE-
Q 019535 81 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF- 159 (339)
Q Consensus 81 g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~- 159 (339)
|+..-. ++++.+.++.+++|.+|++..+++|+..||.++|||+||+.+...++|++|||+
T Consensus 1500 ~mvpAk-------------------sLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHa 1560 (2376)
T KOG1202|consen 1500 GMVPAK-------------------SLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHA 1560 (2376)
T ss_pred Eeeehh-------------------hhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEec
Confidence 444434 789999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCH
Q 019535 160 GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA 234 (339)
Q Consensus 160 G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~ 234 (339)
|+|++|++|+.+|.++|+ +|+.++.++++++++.+ +...++-|.++ .++..-++..|+| |+|+|++....+
T Consensus 1561 GsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd---tsFEq~vl~~T~GrGVdlVLNSLaeE 1636 (2376)
T KOG1202|consen 1561 GSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRD---TSFEQHVLWHTKGRGVDLVLNSLAEE 1636 (2376)
T ss_pred CCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccc---ccHHHHHHHHhcCCCeeeehhhhhHH
Confidence 569999999999999999 99999999999999865 34566777777 7888899999999 999999999988
Q ss_pred HHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCC--CCcHHHHHHHHhCCCC--CCcccce
Q 019535 235 SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKEL--ELDKFVT 310 (339)
Q Consensus 235 ~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~l~~g~l--~~~~~i~ 310 (339)
. ++..++||+.. ||+..+|...-.+..++.. ..+.||.+++|..+...-. .+++.++..++++|.- -.+++.+
T Consensus 1637 k-LQASiRCLa~~-GRFLEIGKfDLSqNspLGM-avfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~t 1713 (2376)
T KOG1202|consen 1637 K-LQASIRCLALH-GRFLEIGKFDLSQNSPLGM-AVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPT 1713 (2376)
T ss_pred H-HHHHHHHHHhc-CeeeeecceecccCCcchh-hhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceecccc
Confidence 8 99999999996 9999999765444444443 3456799999987655432 2356777777776522 3567778
Q ss_pred eeechhhHHHHHHHHhcCcee-EEEEEeC
Q 019535 311 HEMKFEEINSAFDLLIKGKCL-RCVIWMG 338 (339)
Q Consensus 311 ~~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 338 (339)
++|+-.++++||++|.+++.+ |+|+++.
T Consensus 1714 tvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1714 TVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred ccccHHHHHHHHHHHhccCccceEEEEEc
Confidence 999999999999999999988 9999863
No 116
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.95 E-value=1.9e-26 Score=212.41 Aligned_cols=259 Identities=22% Similarity=0.282 Sum_probs=196.3
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
..+|.++|||++|+|+++|+++++|++||+|+..+.. ...
T Consensus 71 ~~~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~---------------------------~~~------------- 110 (350)
T cd08248 71 IEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP---------------------------WSQ------------- 110 (350)
T ss_pred CCCCeeecceeEEEEEecCCCcccCCCCCEEEEecCC---------------------------CCC-------------
Confidence 4678999999999999999999999999999754310 011
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCC----CCEEEEEcc-CHHHHHHHHHHH
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV----GSTVVIFGL-GSIGLAVAEGAR 173 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~----~~~VLI~G~-G~iG~~a~~la~ 173 (339)
|+|++|+.++++.++++|+++++++++.+++++.|||+++.+...+.+ +++|+|+|+ |++|++++++|+
T Consensus 111 ------g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~ 184 (350)
T cd08248 111 ------GTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLK 184 (350)
T ss_pred ------ccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHH
Confidence 389999999999999999999999999999999999998877777654 999999986 999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEE
Q 019535 174 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 253 (339)
Q Consensus 174 ~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 253 (339)
.+|+ +|+++.++ ++.+.++++|++++++..+ .++.+.+... +++|++||++|... ...++++++++ |+++.
T Consensus 185 ~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~--~~vd~vi~~~g~~~-~~~~~~~l~~~-G~~v~ 255 (350)
T cd08248 185 AWGA-HVTTTCST-DAIPLVKSLGADDVIDYNN---EDFEEELTER--GKFDVILDTVGGDT-EKWALKLLKKG-GTYVT 255 (350)
T ss_pred HCCC-eEEEEeCc-chHHHHHHhCCceEEECCC---hhHHHHHHhc--CCCCEEEECCChHH-HHHHHHHhccC-CEEEE
Confidence 9999 78888754 6777888899988888766 4555544432 38999999999885 89999999997 99999
Q ss_pred eccCCCCCc--cccc------HHHHhhc-------CCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhH
Q 019535 254 LGVDQPGSQ--LSLS------SFEVLHS-------GKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 318 (339)
Q Consensus 254 ~g~~~~~~~--~~~~------~~~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~ 318 (339)
+|....... ..+. ...+... ...+.... .....+.+.++++++.++.+.+ .+++.|+++++
T Consensus 256 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~ 331 (350)
T cd08248 256 LVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF--FSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEV 331 (350)
T ss_pred ecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEE--ECCCHHHHHHHHHHHhCCCEec--ccceeecHHHH
Confidence 985421110 0110 0011110 11010000 0112345888999999997653 36789999999
Q ss_pred HHHHHHHhcCcee-EEEEE
Q 019535 319 NSAFDLLIKGKCL-RCVIW 336 (339)
Q Consensus 319 ~~A~~~~~~~~~~-kvvl~ 336 (339)
.+|++.+.++... |++++
T Consensus 332 ~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 332 PEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHHHHHhcCCCceEEEeC
Confidence 9999999877655 77763
No 117
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=5.2e-26 Score=206.88 Aligned_cols=259 Identities=22% Similarity=0.264 Sum_probs=208.8
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCce
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGET 97 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~ 97 (339)
...|.++|||++|+|+++|++++.|++||+|+.... |+. .
T Consensus 55 ~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~--------------------------~~~~~------------- 95 (326)
T cd08272 55 PPLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAG--------------------------GLGGL------------- 95 (326)
T ss_pred CCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccC--------------------------CcCCC-------------
Confidence 346889999999999999999999999999975321 100 1
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG 176 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G 176 (339)
.|+|++|+.++.+.++++|+++++..++.+++.+.+||+++.+..++.++++++|+|+ |.+|++++++++..|
T Consensus 96 ------~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g 169 (326)
T cd08272 96 ------QGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAG 169 (326)
T ss_pred ------CCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcC
Confidence 1389999999999999999999999999999999999998888889999999999985 999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+ +|+.++++ ++.+.++++|++.+++... . +.+.+.+++.+ ++|.++|++++.. ...++++++++ |+++.++
T Consensus 170 ~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~ 241 (326)
T cd08272 170 A-RVYATASS-EKAAFARSLGADPIIYYRE---T-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSIL 241 (326)
T ss_pred C-EEEEEech-HHHHHHHHcCCCEEEecch---h-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEe
Confidence 9 89999887 8888898899988888766 5 77888888877 8999999999865 88899999997 9999998
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCC--C--C----CCCcHHHHHHHHhCCCCCCcccce-eeechhhHHHHHHHHh
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGG--L--K----AKSDIPILLKRYMDKELELDKFVT-HEMKFEEINSAFDLLI 326 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~--~----~~~~~~~~~~~l~~g~l~~~~~i~-~~~~l~~~~~A~~~~~ 326 (339)
... .. .+.....+++++.+..... . . ..+.+..+++++.++.+.. +++ +.|++++++++++.+.
T Consensus 242 ~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~ 314 (326)
T cd08272 242 GGA---TH--DLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLE 314 (326)
T ss_pred cCC---cc--chhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHH
Confidence 652 11 2222335677777654321 1 0 1234667888888886653 334 8899999999999998
Q ss_pred cCcee-EEEEEe
Q 019535 327 KGKCL-RCVIWM 337 (339)
Q Consensus 327 ~~~~~-kvvl~~ 337 (339)
++... |+++++
T Consensus 315 ~~~~~~~vv~~~ 326 (326)
T cd08272 315 SGSARGKIVIDV 326 (326)
T ss_pred cCCcccEEEEEC
Confidence 77655 888764
No 118
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.95 E-value=1.6e-25 Score=204.00 Aligned_cols=261 Identities=16% Similarity=0.179 Sum_probs=200.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|++ ++++++++||+|+.... + .+....
T Consensus 56 ~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~--------------~----------~~~~~~-------------- 95 (324)
T cd08288 56 TFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGW--------------G----------VGERHW-------------- 95 (324)
T ss_pred CCCCccccceEEEEEe--CCCCCCCCCCEEEECCc--------------c----------CCCCCC--------------
Confidence 4688999999999999 77788999999975321 0 110112
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHH--HhcCCC-CCCEEEEEcc-CHHHHHHHHHHHHc
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW--RTANVE-VGSTVVIFGL-GSIGLAVAEGARLC 175 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~--~~~~~~-~~~~VLI~G~-G~iG~~a~~la~~~ 175 (339)
|+|++|+.++.+.++++|+++++++++.+++++++++.++. +..+.. .+++|||+|+ |++|++++|+|+.+
T Consensus 96 -----g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~ 170 (324)
T cd08288 96 -----GGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARL 170 (324)
T ss_pred -----CcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHC
Confidence 38999999999999999999999999999999999987643 123444 5689999987 99999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 176 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 176 G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
|+ +|++++.++++.+.++++|+++++++++ . ...+..+..+++|.+||++++.. ...++..++.+ |+++.+|
T Consensus 171 G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~--~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-g~~~~~G 242 (324)
T cd08288 171 GY-EVVASTGRPEEADYLRSLGASEIIDRAE---L--SEPGRPLQKERWAGAVDTVGGHT-LANVLAQTRYG-GAVAACG 242 (324)
T ss_pred CC-eEEEEeCCHHHHHHHHhcCCCEEEEcch---h--hHhhhhhccCcccEEEECCcHHH-HHHHHHHhcCC-CEEEEEE
Confidence 99 8999988999999999999999988765 2 22455555557899999999855 77888889997 9999998
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCCCC---CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL- 331 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~- 331 (339)
.... .....++..++.++.++.+........ .+.+..+.+++.++.+.+ +.+.++++++++|++.+.+++..
T Consensus 243 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~ 318 (324)
T cd08288 243 LAGG-ADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRG 318 (324)
T ss_pred ecCC-CCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccC
Confidence 7532 222344445556789988865332211 123556677777886643 35899999999999999888776
Q ss_pred EEEEEe
Q 019535 332 RCVIWM 337 (339)
Q Consensus 332 kvvl~~ 337 (339)
|+++.+
T Consensus 319 ~vvv~~ 324 (324)
T cd08288 319 RVVVDV 324 (324)
T ss_pred eEEEeC
Confidence 888763
No 119
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.95 E-value=1.5e-25 Score=206.83 Aligned_cols=264 Identities=18% Similarity=0.196 Sum_probs=194.3
Q ss_pred CCcccCCceeEEEEEecCCCC-CcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 21 FPRILGHEAIGVVESVGENVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 21 ~P~i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.|.++|||++|+|+++|++++ .|++||+|+......| + .
T Consensus 58 ~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~-----------------------~--~--------------- 97 (352)
T cd08247 58 KEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPY-----------------------G--G--------------- 97 (352)
T ss_pred CCCccCceeEEEEEEeCcccccCCCCCCEEEEeecCCC-----------------------C--C---------------
Confidence 488999999999999999998 8999999975432100 0 1
Q ss_pred cccccccccceEEeecc----ceEEcCCCCCccccccccchhhhhhHHHHHhc-CCCCCCEEEEEcc-CHHHHHHHHHHH
Q 019535 100 HFVSVSSFSEYTVLDIA----HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGL-GSIGLAVAEGAR 173 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~----~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~-~~~~~~~VLI~G~-G~iG~~a~~la~ 173 (339)
.|+|++|++++.. .++++|+++++++++.+++++.|||+++.+.. +++++++|+|+|+ |.+|++++++|+
T Consensus 98 ----~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~ 173 (352)
T cd08247 98 ----QGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAK 173 (352)
T ss_pred ----CceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHH
Confidence 1389999999987 79999999999999999999999999887766 7999999999987 799999999999
Q ss_pred HcCC-CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCcc---HHHHHHHh-cCC-CccEEEEcCCCHHHHHHHHHHhh--
Q 019535 174 LCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS---VSQIIIDM-TDG-GADYCFECVGLASLVQEAYACCR-- 245 (339)
Q Consensus 174 ~~G~-~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~---~~~~l~~~-~~g-~~d~v~d~~g~~~~~~~~~~~l~-- 245 (339)
.+|. +.++++. ++++.+.++++|++.+++.++ .+ +...+.+. +++ ++|++|||+|+......++++++
T Consensus 174 ~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~ 249 (352)
T cd08247 174 NHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPK 249 (352)
T ss_pred hcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCcc
Confidence 9854 3567766 455566788899988988766 34 44444444 424 99999999998665889999999
Q ss_pred -cCCcEEEEeccCCCCC--ccc--------ccHHHHh----hcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccce
Q 019535 246 -KGWGKTIVLGVDQPGS--QLS--------LSSFEVL----HSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVT 310 (339)
Q Consensus 246 -~~~G~~v~~g~~~~~~--~~~--------~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~ 310 (339)
++ |+++.++...... ... .....+. .+...+..... ....+.+.++++++.++.+.+ +++
T Consensus 250 ~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~--~~~ 324 (352)
T cd08247 250 SKN-GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLL--DPNADWIEKCAELIADGKVKP--PID 324 (352)
T ss_pred CCC-CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEe--cCCHHHHHHHHHHHhCCCeEe--eec
Confidence 97 9999875322110 000 0111111 11222221110 111234777889998987653 356
Q ss_pred eeechhhHHHHHHHHhcCcee-EEEEEe
Q 019535 311 HEMKFEEINSAFDLLIKGKCL-RCVIWM 337 (339)
Q Consensus 311 ~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 337 (339)
++++++++++|++.++++... |+++++
T Consensus 325 ~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 325 SVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred cEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 899999999999999887765 888753
No 120
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=9.7e-26 Score=205.21 Aligned_cols=257 Identities=25% Similarity=0.349 Sum_probs=202.7
Q ss_pred CCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeec
Q 019535 21 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH 100 (339)
Q Consensus 21 ~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 100 (339)
+|.++|||++|+|+.+|++++.+++||+|+.... +...
T Consensus 56 ~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~---------------------------~~~~--------------- 93 (325)
T cd08271 56 YPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHAS---------------------------LARG--------------- 93 (325)
T ss_pred CCcccccceEEEEEEeCCCCCcCCCCCEEEeccC---------------------------CCCC---------------
Confidence 4789999999999999999999999999975421 0112
Q ss_pred ccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 019535 101 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR 179 (339)
Q Consensus 101 ~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~ 179 (339)
|+|++|+.++.+.++++|++++..+++.+++++.+|++++.+..++.++++|+|+|+ |.+|++++++++..|+ +
T Consensus 94 ----~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~ 168 (325)
T cd08271 94 ----GSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-R 168 (325)
T ss_pred ----ccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-E
Confidence 289999999999999999999999999999999999998888888999999999997 7999999999999999 7
Q ss_pred EEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 180 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 180 Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+++. ++++.+.++.+|++.+++... ..+.+.+.+.+.+ ++|++++++++.. ...++++++++ |+++.++...
T Consensus 169 v~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~ 242 (325)
T cd08271 169 VITTC-SKRNFEYVKSLGADHVIDYND---EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRP 242 (325)
T ss_pred EEEEE-cHHHHHHHHHcCCcEEecCCC---ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCC
Confidence 88877 677888888899988888776 6677888888777 8999999999877 66789999997 9999997543
Q ss_pred CCCcccccHHHHhhcCCeEEeeecCCC----------CCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcC
Q 019535 259 PGSQLSLSSFEVLHSGKILMGSLFGGL----------KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG 328 (339)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~ 328 (339)
... ... .+.+++.+....+... ..++.+.++++++.++.+.+. ..+.|+++++.++++.+.++
T Consensus 243 ~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~ 315 (325)
T cd08271 243 DAS----PDP-PFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDR 315 (325)
T ss_pred CCc----chh-HHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcC
Confidence 211 111 1223334333221111 111235678888888876543 45889999999999999877
Q ss_pred cee-EEEEEe
Q 019535 329 KCL-RCVIWM 337 (339)
Q Consensus 329 ~~~-kvvl~~ 337 (339)
... |+++++
T Consensus 316 ~~~~kiv~~~ 325 (325)
T cd08271 316 HTRGKIVVTI 325 (325)
T ss_pred CccceEEEEC
Confidence 665 888763
No 121
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.95 E-value=3e-25 Score=201.40 Aligned_cols=258 Identities=24% Similarity=0.389 Sum_probs=211.2
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
..|.++|||++|+|+.+|++++.+++||+|+..+. .
T Consensus 56 ~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~------------------------------~-------------- 91 (323)
T cd08241 56 PLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTG------------------------------Q-------------- 91 (323)
T ss_pred CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecC------------------------------C--------------
Confidence 34778999999999999999999999999975320 1
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 178 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~ 178 (339)
|++++|+.++.+.++++|+++++.+++.+.+++.+|+.++.+...+.++++|+|+|+ |.+|++++++++..|+
T Consensus 92 -----~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~- 165 (323)
T cd08241 92 -----GGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA- 165 (323)
T ss_pred -----ceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-
Confidence 289999999999999999999999988888899999998777788999999999987 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+|++++.++++.+.++++|+..+++... .++.+.+.+.+.+ ++|.+++++|+.. +..++++++++ |+++.+|..
T Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~~~~ 240 (323)
T cd08241 166 RVIAAASSEEKLALARALGADHVIDYRD---PDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRSLAWG-GRLLVIGFA 240 (323)
T ss_pred EEEEEeCCHHHHHHHHHcCCceeeecCC---ccHHHHHHHHcCCCCcEEEEECccHHH-HHHHHHhhccC-CEEEEEccC
Confidence 8999999999999998899888888776 6788888888877 8999999999855 88999999997 999999864
Q ss_pred CCCCcccccHHHHhhcCCeEEeeecCCCCC------CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee
Q 019535 258 QPGSQLSLSSFEVLHSGKILMGSLFGGLKA------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 331 (339)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~ 331 (339)
.... ..+.....+.+++++.+........ .+.+.++++++.++.+.+ +.++.|+++++.++++.+.++...
T Consensus 241 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 317 (323)
T cd08241 241 SGEI-PQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKAT 317 (323)
T ss_pred CCCc-CcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCC
Confidence 3211 1133334556788888875443221 134677888898887643 366889999999999988877655
Q ss_pred -EEEE
Q 019535 332 -RCVI 335 (339)
Q Consensus 332 -kvvl 335 (339)
|+++
T Consensus 318 ~~vvv 322 (323)
T cd08241 318 GKVVL 322 (323)
T ss_pred CcEEe
Confidence 7775
No 122
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=6.6e-26 Score=207.15 Aligned_cols=255 Identities=25% Similarity=0.310 Sum_probs=196.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+.+|++++.|++||+|..... .
T Consensus 56 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~------------------------------~-------------- 91 (331)
T cd08273 56 PLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTR------------------------------V-------------- 91 (331)
T ss_pred CCCcccccceEEEEEEeCCCCccCCCCCEEEEeCC------------------------------C--------------
Confidence 57889999999999999999999999999965321 1
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 178 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~ 178 (339)
|+|++|+.++.+.++++|+++++++++.+++++.+||+++.+..++.++++|+|+|+ |.+|++++++|+..|+
T Consensus 92 -----g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~- 165 (331)
T cd08273 92 -----GGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA- 165 (331)
T ss_pred -----cceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-
Confidence 289999999999999999999999999999999999998877788999999999987 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
+|+.++. +++.+.++++|+.. ++... .++.+. +...+++|++|+|+++.. ...++++++.+ |+++.+|...
T Consensus 166 ~v~~~~~-~~~~~~~~~~g~~~-~~~~~---~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~ 236 (331)
T cd08273 166 EVYGTAS-ERNHAALRELGATP-IDYRT---KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNS 236 (331)
T ss_pred EEEEEeC-HHHHHHHHHcCCeE-EcCCC---cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCC
Confidence 8999987 88888888899754 44443 344333 333348999999999888 88999999997 9999998653
Q ss_pred CCCcccccH--------------HHHhhcCCeEEeeecCCC----CCCCcHHHHHHHHhCCCCCCcccceeeechhhHHH
Q 019535 259 PGSQLSLSS--------------FEVLHSGKILMGSLFGGL----KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 320 (339)
Q Consensus 259 ~~~~~~~~~--------------~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~ 320 (339)
......+.+ .....++.++.+...... ...+.+.++++++.++.+.+ .+.++++++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~ 314 (331)
T cd08273 237 SLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAE 314 (331)
T ss_pred CCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHH
Confidence 222211111 011122233322221100 01235778889999997754 3668899999999
Q ss_pred HHHHHhcCcee-EEEE
Q 019535 321 AFDLLIKGKCL-RCVI 335 (339)
Q Consensus 321 A~~~~~~~~~~-kvvl 335 (339)
+++.+.++... |+|+
T Consensus 315 a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 315 AHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHcCCCcceEEe
Confidence 99998877665 7765
No 123
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=6.1e-25 Score=200.97 Aligned_cols=261 Identities=21% Similarity=0.320 Sum_probs=206.8
Q ss_pred CCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCcee
Q 019535 19 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 98 (339)
Q Consensus 19 ~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 98 (339)
+.+|.++|||++|+|+.+|++++++++||+|+.... +
T Consensus 54 ~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~------------------------------~------------- 90 (337)
T cd08275 54 PKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTR------------------------------F------------- 90 (337)
T ss_pred CCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEecC------------------------------C-------------
Confidence 356889999999999999999999999999975321 1
Q ss_pred ecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHc-C
Q 019535 99 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC-G 176 (339)
Q Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~-G 176 (339)
|+|++|+.++.+.++++|+++++++++.+++++.++|+++....+++++++|+|+|+ |.+|++++++|+.. +
T Consensus 91 ------~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~ 164 (337)
T cd08275 91 ------GGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPN 164 (337)
T ss_pred ------CeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccC
Confidence 289999999999999999999999999999999999998888888999999999987 99999999999999 4
Q ss_pred CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
. .++... .+++.++++.+|++.+++... .++.+.+.+.+.+++|+++||+|+.. ...++++++++ |+++.+|.
T Consensus 165 ~-~~~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~ 237 (337)
T cd08275 165 V-TVVGTA-SASKHEALKENGVTHVIDYRT---QDYVEEVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGA 237 (337)
T ss_pred c-EEEEeC-CHHHHHHHHHcCCcEEeeCCC---CcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEee
Confidence 3 333332 355778888899888888776 67888888877558999999999876 88999999997 99999986
Q ss_pred CCCCC--c-------------ccccHHHHhhcCCeEEeeecCCCCCC-----CcHHHHHHHHhCCCCCCcccceeeechh
Q 019535 257 DQPGS--Q-------------LSLSSFEVLHSGKILMGSLFGGLKAK-----SDIPILLKRYMDKELELDKFVTHEMKFE 316 (339)
Q Consensus 257 ~~~~~--~-------------~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~l~~g~l~~~~~i~~~~~l~ 316 (339)
..... . ..+....++.++.++.+......... ..+.++++++.++.+.+. .++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 315 (337)
T cd08275 238 ANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFE 315 (337)
T ss_pred cCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHH
Confidence 43211 1 11222345677888887764322111 135678888888876543 56889999
Q ss_pred hHHHHHHHHhcCcee-EEEEEe
Q 019535 317 EINSAFDLLIKGKCL-RCVIWM 337 (339)
Q Consensus 317 ~~~~A~~~~~~~~~~-kvvl~~ 337 (339)
+++++++.+.++... |+++++
T Consensus 316 ~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 316 EVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHHcCCCcceEEEeC
Confidence 999999999887665 888764
No 124
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.94 E-value=3.6e-25 Score=199.75 Aligned_cols=250 Identities=21% Similarity=0.297 Sum_probs=199.1
Q ss_pred CCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 019535 18 RAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 97 (339)
Q Consensus 18 ~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 97 (339)
...+|.++|||++|+|+.+|+++..+++||+|+..+.. ...
T Consensus 56 ~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~---------------------------~~~------------ 96 (309)
T cd05289 56 PLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPF---------------------------TRG------------ 96 (309)
T ss_pred CCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCC---------------------------CCC------------
Confidence 34568999999999999999999999999999754310 011
Q ss_pred eecccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 019535 98 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG 176 (339)
Q Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G 176 (339)
|+|++|+.++.+.++++|+++++..++.+++.+.++++++.....+.++++|+|+|+ |.+|++++++++..|
T Consensus 97 -------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g 169 (309)
T cd05289 97 -------GAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARG 169 (309)
T ss_pred -------CcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcC
Confidence 389999999999999999999999999999999999998877777899999999987 999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 177 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 177 ~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+ +|++++.++ +.+.++++|..++++... .++.+ .+.+ ++|++|+++++.. ...++++++++ |+++.+|
T Consensus 170 ~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~----~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~g 238 (309)
T cd05289 170 A-RVIATASAA-NADFLRSLGADEVIDYTK---GDFER----AAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSIA 238 (309)
T ss_pred C-EEEEEecch-hHHHHHHcCCCEEEeCCC---Cchhh----ccCCCCceEEEECCchHH-HHHHHHHHhcC-cEEEEEc
Confidence 9 888888766 788888899888887665 34333 3344 8999999999885 89999999997 9999998
Q ss_pred cCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEE
Q 019535 256 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCV 334 (339)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv 334 (339)
..... .. ....++.++........ .+.+..+++++.++.+. .++++.|++++++++++.+.++... |++
T Consensus 239 ~~~~~--~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv 308 (309)
T cd05289 239 GPPPA--EQ----AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHARGKVV 308 (309)
T ss_pred CCCcc--hh----hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence 64321 11 22344566555443221 35688899999888654 3467899999999999998877655 665
No 125
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=5.9e-25 Score=199.53 Aligned_cols=255 Identities=23% Similarity=0.277 Sum_probs=192.7
Q ss_pred CCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 019535 20 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 99 (339)
Q Consensus 20 ~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 99 (339)
.+|.++|||++|+|+++|++++++++||+|+..... ...
T Consensus 57 ~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------------------------~~~-------------- 95 (319)
T cd08267 57 PFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP---------------------------KGG-------------- 95 (319)
T ss_pred CCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC---------------------------CCC--------------
Confidence 467899999999999999999999999999754320 011
Q ss_pred cccccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 019535 100 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 178 (339)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~ 178 (339)
|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+.++++|+|+|+ |++|++++++|+..|+
T Consensus 96 -----g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~- 169 (319)
T cd08267 96 -----GALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA- 169 (319)
T ss_pred -----ceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-
Confidence 389999999999999999999999999999999999998877777999999999997 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCH-HHHHHHHHHhhcCCcEEEEecc
Q 019535 179 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 179 ~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+|++++++ ++.+.++++|+.++++... .++. ...+.+ ++|++++|+++. ......+..++++ |+++.+|.
T Consensus 170 ~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~ 241 (319)
T cd08267 170 HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGG 241 (319)
T ss_pred EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEecc
Confidence 89988865 8888888999888887665 3333 344455 899999999853 2233444459997 99999986
Q ss_pred CCCCCcccc---cHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-E
Q 019535 257 DQPGSQLSL---SSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R 332 (339)
Q Consensus 257 ~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k 332 (339)
......... ....... ...+....... ..+.+.++++++.++.+.+ +++++|+++++++|++.+.++... |
T Consensus 242 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~ 316 (319)
T cd08267 242 GPSGLLLVLLLLPLTLGGG-GRRLKFFLAKP--NAEDLEQLAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGK 316 (319)
T ss_pred ccccccccccccchhhccc-cceEEEEEecC--CHHHHHHHHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCc
Confidence 532221111 1111111 12222221111 1456888999999887653 467899999999999999877655 6
Q ss_pred EE
Q 019535 333 CV 334 (339)
Q Consensus 333 vv 334 (339)
++
T Consensus 317 vv 318 (319)
T cd08267 317 VV 318 (319)
T ss_pred Ee
Confidence 65
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.93 E-value=1.2e-23 Score=179.07 Aligned_cols=250 Identities=20% Similarity=0.234 Sum_probs=198.0
Q ss_pred ceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeecccccccc
Q 019535 28 EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSF 107 (339)
Q Consensus 28 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~ 107 (339)
..+|+|++.+ -+++++||.|+... +|
T Consensus 78 ~GV~kVi~S~--~~~~~~GD~v~g~~----------------------------------------------------gW 103 (343)
T KOG1196|consen 78 FGVAKVIDSG--HPNYKKGDLVWGIV----------------------------------------------------GW 103 (343)
T ss_pred CceEEEEecC--CCCCCcCceEEEec----------------------------------------------------cc
Confidence 7889999964 46899999995422 79
Q ss_pred cceEEeecc--ceEEcCC--CCCccc-cccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEE
Q 019535 108 SEYTVLDIA--HVVKVDP--TVPPNR-ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRII 181 (339)
Q Consensus 108 ~~~~~~~~~--~~~~lp~--~~~~~~-aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi 181 (339)
.||.+++.. ..++++. ++++.- ..++.++..|||....+....+.+++|+|-|| |++|+++.|+|+.+|+ +|+
T Consensus 104 eeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VV 182 (343)
T KOG1196|consen 104 EEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVV 182 (343)
T ss_pred eEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEE
Confidence 999999764 4555554 344333 23477899999999999999999999999987 9999999999999999 999
Q ss_pred EEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC--
Q 019535 182 GVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ-- 258 (339)
Q Consensus 182 ~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-- 258 (339)
+.+.++++.+.++. +|.+..+|+.+ ..+..+.+++....++|+-||.+|+.. ++..+..|+.. ||++.+|...
T Consensus 183 GsaGS~EKv~ll~~~~G~d~afNYK~--e~~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~ISqY 258 (343)
T KOG1196|consen 183 GSAGSKEKVDLLKTKFGFDDAFNYKE--ESDLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMISQY 258 (343)
T ss_pred EecCChhhhhhhHhccCCccceeccC--ccCHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeehhc
Confidence 99999999999865 79999999998 238888998887779999999999999 99999999996 9999999643
Q ss_pred --CCCcccccHHHHhhcCCeEEeeecCCCCC--CCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EE
Q 019535 259 --PGSQLSLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 333 (339)
Q Consensus 259 --~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv 333 (339)
..++.--++..++.|++.+.|+......+ .+-+..+..++++|+|....-+ .-+|+..++|+.-|.++.+. |.
T Consensus 259 N~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKq 336 (343)
T KOG1196|consen 259 NLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQ 336 (343)
T ss_pred cccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccce
Confidence 11111223345667888888875433221 1234678888999999776433 33699999999999999887 99
Q ss_pred EEEeC
Q 019535 334 VIWMG 338 (339)
Q Consensus 334 vl~~~ 338 (339)
++++.
T Consensus 337 iv~va 341 (343)
T KOG1196|consen 337 LVKVA 341 (343)
T ss_pred EEEee
Confidence 98874
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.77 E-value=8.4e-18 Score=132.52 Aligned_cols=128 Identities=28% Similarity=0.491 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHH
Q 019535 163 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY 241 (339)
Q Consensus 163 ~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~ 241 (339)
++|++++|+|+..|+ +|+++++++++++.++++|+++++++++ .++.+++++++++ ++|+||||+|+...++.++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence 589999999999997 9999999999999999999999999998 7899999999998 9999999999888899999
Q ss_pred HHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHHHHHh
Q 019535 242 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYM 299 (339)
Q Consensus 242 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~ 299 (339)
++++++ |+++.+|... .....++...++.+++++.+++.+. .++++++++++.
T Consensus 77 ~~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la 129 (130)
T PF00107_consen 77 KLLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA 129 (130)
T ss_dssp HHEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred HHhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence 999997 9999999875 5678889999999999999997655 467888888765
No 128
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.69 E-value=3.2e-17 Score=125.02 Aligned_cols=84 Identities=37% Similarity=0.549 Sum_probs=74.4
Q ss_pred ccCCCCCcccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCC
Q 019535 16 QCRAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG 95 (339)
Q Consensus 16 ~~~~~~P~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~ 95 (339)
.....+|.++|||++|+|+++|+++++|++||+|+..+...|+.|.+|..+.+++|..... +|+..+|
T Consensus 26 ~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~---~g~~~~G--------- 93 (109)
T PF08240_consen 26 PPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEV---LGLGLDG--------- 93 (109)
T ss_dssp SSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEE---TTTSSTC---------
T ss_pred ccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCE---eEcCCCC---------
Confidence 4566899999999999999999999999999999998888899999999999999987764 6766666
Q ss_pred ceeecccccccccceEEeeccceEEc
Q 019535 96 ETIHHFVSVSSFSEYTVLDIAHVVKV 121 (339)
Q Consensus 96 ~~~~~~~~~g~~~~~~~~~~~~~~~l 121 (339)
+|+||+++++++++|+
T Consensus 94 ----------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 94 ----------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp ----------SSBSEEEEEGGGEEEE
T ss_pred ----------cccCeEEEehHHEEEC
Confidence 9999999999999985
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.50 E-value=1.1e-12 Score=121.22 Aligned_cols=176 Identities=14% Similarity=0.167 Sum_probs=137.7
Q ss_pred hHHHHHhcCC-CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHh
Q 019535 141 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 219 (339)
Q Consensus 141 ~~al~~~~~~-~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~ 219 (339)
+.++.+..++ .+|++|+|+|.|++|+.+++.++.+|+ +|++++.++.+.+.++.+|+..+ + ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v--- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV--- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH---
Confidence 4445554443 579999999999999999999999999 89999999999999999998432 1 11222
Q ss_pred cCCCccEEEEcCCCHHHHHHH-HHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHH--HHHH
Q 019535 220 TDGGADYCFECVGLASLVQEA-YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIP--ILLK 296 (339)
Q Consensus 220 ~~g~~d~v~d~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~ 296 (339)
.++|+||+|+|....+... ++.++++ |+++.+|.. ...++...+..+++++.+++.... ..++. ..+.
T Consensus 256 --~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~ 326 (413)
T cd00401 256 --KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRII 326 (413)
T ss_pred --cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhh
Confidence 2589999999998878765 9999997 999999854 245777778888898888754321 11345 6899
Q ss_pred HHhCCCC-CCcccceee-----echh-hHHHHHHHHhcCce--eEEEEEeC
Q 019535 297 RYMDKEL-ELDKFVTHE-----MKFE-EINSAFDLLIKGKC--LRCVIWMG 338 (339)
Q Consensus 297 ~l~~g~l-~~~~~i~~~-----~~l~-~~~~A~~~~~~~~~--~kvvl~~~ 338 (339)
++.+|++ ++...++|. ++++ ++.+++..+.++.. .|+++.+.
T Consensus 327 LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 327 LLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 9999998 888888999 9999 99999999987654 37777653
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.37 E-value=1.3e-11 Score=116.93 Aligned_cols=155 Identities=20% Similarity=0.260 Sum_probs=114.5
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCC----------CccHHHHHHH
Q 019535 150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCG----------DKSVSQIIID 218 (339)
Q Consensus 150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~----------~~~~~~~l~~ 218 (339)
..++++|+|+|+|++|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.. ..++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4579999999999999999999999999 89999999999999999999854 5543300 0133333333
Q ss_pred h-cC--CCccEEEEcCCC-----HHH-HHHHHHHhhcCCcEEEEeccCCCCC-cccccHHHHhh-cCCeEEeeecCCCCC
Q 019535 219 M-TD--GGADYCFECVGL-----ASL-VQEAYACCRKGWGKTIVLGVDQPGS-QLSLSSFEVLH-SGKILMGSLFGGLKA 287 (339)
Q Consensus 219 ~-~~--g~~d~v~d~~g~-----~~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~-~~~~i~~~~~~~~~~ 287 (339)
. .+ +++|++|+|++. +.. .+.+++.++++ |++++++...++. ..+.+...++. +++++.+... ++
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc-
Confidence 3 33 379999999986 334 49999999998 9999999754332 34444455665 7899888752 22
Q ss_pred CCcHH-HHHHHHhCCCCCCcccce
Q 019535 288 KSDIP-ILLKRYMDKELELDKFVT 310 (339)
Q Consensus 288 ~~~~~-~~~~~l~~g~l~~~~~i~ 310 (339)
..+. ...+++.++.+++..+++
T Consensus 317 -~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 -SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred -hhHHHHHHHHHHhCCccHHHHhc
Confidence 2444 589999999887766665
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.29 E-value=1.3e-12 Score=102.34 Aligned_cols=120 Identities=21% Similarity=0.321 Sum_probs=77.7
Q ss_pred cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC--CHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhc
Q 019535 196 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG--LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS 273 (339)
Q Consensus 196 ~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 273 (339)
|||++++|+++ .++ ...+++|+|||++| ....+..++++| ++ |+++.++. .........+
T Consensus 1 LGAd~vidy~~---~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~ 62 (127)
T PF13602_consen 1 LGADEVIDYRD---TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLK 62 (127)
T ss_dssp CT-SEEEETTC---SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHH
T ss_pred CCcCEEecCCC---ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhc
Confidence 68999999987 665 22349999999999 666447777888 97 99999973 1111111122
Q ss_pred CCeEEeeecCC-CC---CCCcHHHHHHHHhCCCCCCcccceeeechhhHHHHHHHHhcCcee-EEEE
Q 019535 274 GKILMGSLFGG-LK---AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 335 (339)
Q Consensus 274 ~~~i~~~~~~~-~~---~~~~~~~~~~~l~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 335 (339)
...+....+.. .+ ..+.++++.+++.+|++++. +.++||++++.+|++.+++++.. |+||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 23333332221 11 23458999999999987765 88999999999999999999887 9986
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.62 E-value=2.2e-07 Score=82.58 Aligned_cols=163 Identities=21% Similarity=0.328 Sum_probs=100.2
Q ss_pred hcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHhc----CCceEEeCCCCCCccHHHHHHHhcC
Q 019535 147 TANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTD 221 (339)
Q Consensus 147 ~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~~----ga~~vi~~~~~~~~~~~~~l~~~~~ 221 (339)
.+.++++++||.+|+|. |..++++++..|.. +|++++.+++..+.+++. +...+ .... .++.+ + .+..
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~---~d~~~-l-~~~~ 144 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRL---GEIEA-L-PVAD 144 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEE---cchhh-C-CCCC
Confidence 35688999999999987 88888888887753 799999999998888763 33222 1111 12211 1 1223
Q ss_pred CCccEEEE-cC-----CCHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhcCCeEEeeecCCCCCCCcHHHHH
Q 019535 222 GGADYCFE-CV-----GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILL 295 (339)
Q Consensus 222 g~~d~v~d-~~-----g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 295 (339)
+.||+|+. ++ .....++++.+.|+++ |+++..+..... ... ....+...+.+...... ....++.
T Consensus 145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~~~----~~~~~~~~~~~~~~~~~---~~~~e~~ 215 (272)
T PRK11873 145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-ELP----EEIRNDAELYAGCVAGA---LQEEEYL 215 (272)
T ss_pred CceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-CCC----HHHHHhHHHHhccccCC---CCHHHHH
Confidence 37999984 32 3345699999999998 999998764322 111 11111222221111111 2345566
Q ss_pred HHHhC-CCCCCcccceeeechhhHHHHHHHH
Q 019535 296 KRYMD-KELELDKFVTHEMKFEEINSAFDLL 325 (339)
Q Consensus 296 ~~l~~-g~l~~~~~i~~~~~l~~~~~A~~~~ 325 (339)
+++++ |...........++++++.++++.+
T Consensus 216 ~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 216 AMLAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHHHCCCCceEEEeccceecccHHHHHHHh
Confidence 66655 4433433345668889999999888
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.54 E-value=8.5e-07 Score=84.24 Aligned_cols=108 Identities=19% Similarity=0.250 Sum_probs=81.6
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCC----------CCCccHHHHHHHh
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKN----------CGDKSVSQIIIDM 219 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~----------~~~~~~~~~l~~~ 219 (339)
.++.+|+|+|+|.+|++++++++.+|+ .|++++.++++++.++++|++.+ ++..+ .-.+++.+..+++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 357899999999999999999999999 89999999999999999998653 22211 0012333333333
Q ss_pred cC---CCccEEEEcC---CCHH---HHHHHHHHhhcCCcEEEEeccCCCC
Q 019535 220 TD---GGADYCFECV---GLAS---LVQEAYACCRKGWGKTIVLGVDQPG 260 (339)
Q Consensus 220 ~~---g~~d~v~d~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~~ 260 (339)
.. .++|++|+|+ |.+. ..++.++.++++ +.+|+++...++
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG 289 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG 289 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC
Confidence 32 2799999999 5433 578889999998 999999876654
No 134
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.45 E-value=1.7e-08 Score=94.85 Aligned_cols=161 Identities=17% Similarity=0.185 Sum_probs=106.1
Q ss_pred cccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccc
Q 019535 23 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV 102 (339)
Q Consensus 23 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~ 102 (339)
..-|.|+++.+.+|++++++ +|+.-+.. ||.|..| ++.|..... .|...++
T Consensus 88 ~~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~~---------------- 138 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLER---------------- 138 (417)
T ss_pred hcCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHHH----------------
Confidence 45788999999999998876 55555666 9999999 555654443 4444444
Q ss_pred ccccccceEEeeccceEEcCCCCCccccccccchhhhhhHH---HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 103 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA---AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~a---l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
.|++++.+++ .+.. .-.++ ..+.+.++.| ..+..+...+.+|+|+|+|.+|..+++.++..|+.+
T Consensus 139 ---lf~~a~~~~k-~vr~-~t~i~-------~~~vSv~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~ 206 (417)
T TIGR01035 139 ---LFQKAFSVGK-RVRT-ETDIS-------AGAVSISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK 206 (417)
T ss_pred ---HHHHHHHHhh-hhhh-hcCCC-------CCCcCHHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence 8999988876 3332 00111 1122222222 223334457899999999999999999999999668
Q ss_pred EEEEcCChhHHH-HHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHH
Q 019535 180 IIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 235 (339)
Q Consensus 180 Vi~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~ 235 (339)
|+++.++.++.+ +++.+|.. .++. .++.+.+. ++|+||+|++.+.
T Consensus 207 V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l~-----~aDvVi~aT~s~~ 252 (417)
T TIGR01035 207 ILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYLA-----EADIVISSTGAPH 252 (417)
T ss_pred EEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHHh-----hCCEEEECCCCCC
Confidence 999999887754 55667753 2221 12222221 5899999998754
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.33 E-value=1.1e-05 Score=72.40 Aligned_cols=96 Identities=21% Similarity=0.317 Sum_probs=76.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 231 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~ 231 (339)
.+.+++|+|.|.+|+.+++.++.+|+ +|+++++++++.+.++.+|+..+ .. .++.+.+ ..+|+||+|+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~l~~~l-----~~aDiVI~t~ 218 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SELAEEV-----GKIDIIFNTI 218 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HHHHHHh-----CCCCEEEECC
Confidence 58999999999999999999999999 99999999888888888886532 11 1222222 2589999999
Q ss_pred CCHHHHHHHHHHhhcCCcEEEEeccCCCC
Q 019535 232 GLASLVQEAYACCRKGWGKTIVLGVDQPG 260 (339)
Q Consensus 232 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 260 (339)
+.....+..++.++++ +.+++++..+++
T Consensus 219 p~~~i~~~~l~~~~~g-~vIIDla~~pgg 246 (296)
T PRK08306 219 PALVLTKEVLSKMPPE-ALIIDLASKPGG 246 (296)
T ss_pred ChhhhhHHHHHcCCCC-cEEEEEccCCCC
Confidence 8776567888899997 999999876544
No 136
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.27 E-value=1.7e-05 Score=74.10 Aligned_cols=103 Identities=21% Similarity=0.233 Sum_probs=77.8
Q ss_pred hhHHHHHhcCCC-CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHH
Q 019535 140 GVGAAWRTANVE-VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID 218 (339)
Q Consensus 140 a~~al~~~~~~~-~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~ 218 (339)
+|.++....++. .+++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+. +. ++.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal-- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAA-- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHH--
Confidence 344444443544 79999999999999999999999999 899999988877666666654 22 122222
Q ss_pred hcCCCccEEEEcCCCHHHHH-HHHHHhhcCCcEEEEeccCC
Q 019535 219 MTDGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 219 ~~~g~~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 258 (339)
.++|++|+++|....+. ..+..++++ +.++..|...
T Consensus 266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 25899999999887665 688889997 8888888654
No 137
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.23 E-value=3.9e-05 Score=67.30 Aligned_cols=131 Identities=21% Similarity=0.213 Sum_probs=83.6
Q ss_pred cccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC
Q 019535 106 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 185 (339)
Q Consensus 106 ~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~ 185 (339)
+|.+|.. +...++.+++.+++..+. .+.... ....+.. .+.++.+||.+|+|. |..++.++ ..|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~--~~~~~~~VLDiGcGs-G~l~i~~~-~~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEK--LVLPGKTVLDVGCGS-GILAIAAA-KLGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHh--hcCCCCEEEEeCCcH-HHHHHHHH-HcCCCeEEEEEC
Confidence 4555644 667889999988877654 221111 1111211 256789999999986 87777654 467757999999
Q ss_pred ChhHHHHHHhc----CCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH---HHHHHHHHHhhcCCcEEEEeccC
Q 019535 186 ISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 186 ~~~~~~~~~~~----ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
++...+.+++. +....+.... .+ ..||+|+...... ..++.+.+.|+++ |.+++.|..
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~~~~~---~~----------~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNVYLPQ---GD----------LKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceEEEcc---CC----------CCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 99988877653 2211111111 00 0589998655433 2366788899998 999988754
No 138
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.17 E-value=6e-06 Score=74.72 Aligned_cols=108 Identities=20% Similarity=0.248 Sum_probs=79.1
Q ss_pred ceEEcCCCCCccccccccchhhhhhHHHHHhcCC---CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHH-HH
Q 019535 117 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV---EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF-EI 192 (339)
Q Consensus 117 ~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~---~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~-~~ 192 (339)
..+++|+.++.+.++... +.+++++++...... .++.+|+|+|+|.+|+.+++.++..|..+|+++++++++. ++
T Consensus 140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l 218 (311)
T cd05213 140 KAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL 218 (311)
T ss_pred HHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 667888999888887766 677777764332221 3689999999999999999999988876899999988765 56
Q ss_pred HHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHH
Q 019535 193 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASL 236 (339)
Q Consensus 193 ~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~ 236 (339)
++++|+. +++. +++.+.+. .+|+||.|++.+..
T Consensus 219 a~~~g~~-~~~~-----~~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 219 AKELGGN-AVPL-----DELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHcCCe-EEeH-----HHHHHHHh-----cCCEEEECCCCCch
Confidence 6778863 3322 12222221 48999999998774
No 139
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.17 E-value=6.4e-08 Score=91.27 Aligned_cols=161 Identities=18% Similarity=0.168 Sum_probs=98.3
Q ss_pred cccCCceeEEEEEecCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccc
Q 019535 23 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV 102 (339)
Q Consensus 23 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~ 102 (339)
..-|||+++.+.+|++++++.-+|..- . ||.|.. -++.|..... .|...++
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~q-----I-lgQvk~----a~~~a~~~g~---~g~~l~~---------------- 140 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQ-----I-LGQVKD----AYALAQEAGT---VGTILNR---------------- 140 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChH-----H-HHHHHH----HHHHHHHcCC---chHHHHH----------------
Confidence 457999999999999998775555533 2 444442 1222222221 2211222
Q ss_pred ccccccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcC---CCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 019535 103 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN---VEVGSTVVIFGLGSIGLAVAEGARLCGATR 179 (339)
Q Consensus 103 ~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~---~~~~~~VLI~G~G~iG~~a~~la~~~G~~~ 179 (339)
.|++.+.++ +.+..+.+.. ..+.+.+++++..... ...+.+|+|+|+|.+|.++++.++..|+++
T Consensus 141 ---lf~~a~~~~--------k~v~~~t~i~-~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~ 208 (423)
T PRK00045 141 ---LFQKAFSVA--------KRVRTETGIG-AGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRK 208 (423)
T ss_pred ---HHHHHHHHH--------hhHhhhcCCC-CCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCe
Confidence 566554443 3333222222 2255666665433222 256789999999999999999999999878
Q ss_pred EEEEcCChhHHH-HHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHH
Q 019535 180 IIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 235 (339)
Q Consensus 180 Vi~~~~~~~~~~-~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~ 235 (339)
|+++.+++++.+ +++.+|.. +++.. ++.+.+ .++|+||+|++.+.
T Consensus 209 V~v~~r~~~ra~~la~~~g~~-~~~~~-----~~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 209 ITVANRTLERAEELAEEFGGE-AIPLD-----ELPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred EEEEeCCHHHHHHHHHHcCCc-EeeHH-----HHHHHh-----ccCCEEEECCCCCC
Confidence 999999887755 56667753 33221 222222 25899999998754
No 140
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.16 E-value=3.4e-05 Score=71.59 Aligned_cols=100 Identities=23% Similarity=0.281 Sum_probs=76.3
Q ss_pred HHHHHhcC-CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhc
Q 019535 142 GAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT 220 (339)
Q Consensus 142 ~al~~~~~-~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~ 220 (339)
.++.+..+ ...+++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...++..|+. +. +..+.+
T Consensus 183 ~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~--------~leeal---- 248 (406)
T TIGR00936 183 DGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VM--------TMEEAA---- 248 (406)
T ss_pred HHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eC--------CHHHHH----
Confidence 33444434 3579999999999999999999999999 899999888877666666752 22 122222
Q ss_pred CCCccEEEEcCCCHHHHH-HHHHHhhcCCcEEEEeccC
Q 019535 221 DGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 221 ~g~~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 257 (339)
.+.|++|+++|....+. ..+..++++ +.++.+|..
T Consensus 249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~ 284 (406)
T TIGR00936 249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF 284 (406)
T ss_pred -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence 24799999999988776 488899997 888888765
No 141
>PLN02494 adenosylhomocysteinase
Probab=98.07 E-value=5.2e-05 Score=71.12 Aligned_cols=101 Identities=18% Similarity=0.231 Sum_probs=77.8
Q ss_pred hHHHHHhcCC-CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHh
Q 019535 141 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 219 (339)
Q Consensus 141 ~~al~~~~~~-~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~ 219 (339)
+.++.+..++ -.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+.. + ++.+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v--------~leEal~-- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L--------TLEDVVS-- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c--------cHHHHHh--
Confidence 3445454444 568999999999999999999999999 8999998887766666667642 2 1222222
Q ss_pred cCCCccEEEEcCCCHHH-HHHHHHHhhcCCcEEEEeccC
Q 019535 220 TDGGADYCFECVGLASL-VQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 220 ~~g~~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~ 257 (339)
..|++|.+.|+... ....++.|+++ +.++.+|..
T Consensus 309 ---~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 ---EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred ---hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 37999999998764 48899999997 999999874
No 142
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.04 E-value=4.5e-05 Score=68.04 Aligned_cols=96 Identities=19% Similarity=0.256 Sum_probs=71.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 231 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~ 231 (339)
.+++++|+|.|.+|+++++.++.+|+ +|++..+++++.+.+..+|... +.. .++.+.+ ..+|+||+++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~-~~~-----~~l~~~l-----~~aDiVint~ 217 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIP-FPL-----NKLEEKV-----AEIDIVINTI 217 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-ecH-----HHHHHHh-----ccCCEEEECC
Confidence 47899999999999999999999999 9999999888777776666432 211 1222222 2589999999
Q ss_pred CCHHHHHHHHHHhhcCCcEEEEeccCCCC
Q 019535 232 GLASLVQEAYACCRKGWGKTIVLGVDQPG 260 (339)
Q Consensus 232 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 260 (339)
+....-...++.++++ ..++.++..+++
T Consensus 218 P~~ii~~~~l~~~k~~-aliIDlas~Pg~ 245 (287)
T TIGR02853 218 PALVLTADVLSKLPKH-AVIIDLASKPGG 245 (287)
T ss_pred ChHHhCHHHHhcCCCC-eEEEEeCcCCCC
Confidence 8665345677788886 888888875433
No 143
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.03 E-value=4.1e-05 Score=63.96 Aligned_cols=115 Identities=17% Similarity=0.210 Sum_probs=83.3
Q ss_pred ccccccchhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCceEEeC
Q 019535 129 RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFVNS 204 (339)
Q Consensus 129 ~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~vi~~ 204 (339)
..-.+.-+...|. +.+.+.++++++||-+|+|. |..++-+|+..| +|+.+.+.++-.+.+ +.+|...|...
T Consensus 51 ~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~ 125 (209)
T COG2518 51 CGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVR 125 (209)
T ss_pred CCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEE
Confidence 3334444555554 56888999999999999874 999999999998 799999988755554 45776443322
Q ss_pred CCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 205 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 205 ~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
.. +. .+-+... +||.|+-+.+.+..-+.+++.|+++ |+++..-.
T Consensus 126 ~g---DG----~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG 170 (209)
T COG2518 126 HG---DG----SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG 170 (209)
T ss_pred EC---Cc----ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence 22 11 1233344 8999998888777668899999998 99988644
No 144
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.89 E-value=0.0001 Score=68.27 Aligned_cols=100 Identities=23% Similarity=0.231 Sum_probs=70.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.. ++........+ .+.+.+.. ..+|++|+|
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~------~~~l~~~l-~~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN------AYEIEDAV-KRADLLIGA 237 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC------HHHHHHHH-ccCCEEEEc
Confidence 35679999999999999999999999 89999998888777654 55432222221 11222222 258999999
Q ss_pred CC---C--HH-HHHHHHHHhhcCCcEEEEeccCCCC
Q 019535 231 VG---L--AS-LVQEAYACCRKGWGKTIVLGVDQPG 260 (339)
Q Consensus 231 ~g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~~ 260 (339)
++ . +. ..+..++.++++ +.+++++...++
T Consensus 238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~GG 272 (370)
T TIGR00518 238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQGG 272 (370)
T ss_pred cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCCC
Confidence 73 2 21 246788889997 999999876544
No 145
>PRK08324 short chain dehydrogenase; Validated
Probab=97.79 E-value=0.00029 Score=70.90 Aligned_cols=137 Identities=19% Similarity=0.252 Sum_probs=86.3
Q ss_pred cccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc
Q 019535 106 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 184 (339)
Q Consensus 106 ~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~ 184 (339)
++++|..+++..++.+ +.++.+++..-..+ ..+...++++||+|+ |.+|+.+++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5667777777777766 55665655421100 112235789999986 9999999999999999 899999
Q ss_pred CChhHHHHHHh-cCC-----ceEEeCCCCCCccHHHHHHHhc--CCCccEEEEcCCC-----------------------
Q 019535 185 VISEKFEIGKR-FGV-----TEFVNSKNCGDKSVSQIIIDMT--DGGADYCFECVGL----------------------- 233 (339)
Q Consensus 185 ~~~~~~~~~~~-~ga-----~~vi~~~~~~~~~~~~~l~~~~--~g~~d~v~d~~g~----------------------- 233 (339)
+++++.+.+.. ++. ....|..+ ...+.+.+.+.. .+++|++|+++|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 98877655433 332 11234333 122323333322 2479999999982
Q ss_pred --HHHHHHHHHHhhc---CCcEEEEeccC
Q 019535 234 --ASLVQEAYACCRK---GWGKTIVLGVD 257 (339)
Q Consensus 234 --~~~~~~~~~~l~~---~~G~~v~~g~~ 257 (339)
...++.+++.+.. + |+++.++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1224455666655 5 789998864
No 146
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.76 E-value=0.00025 Score=63.56 Aligned_cols=97 Identities=20% Similarity=0.249 Sum_probs=64.4
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCc-eEEeCCCCCCccHHHHHHHhcCCCc
Q 019535 150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT-EFVNSKNCGDKSVSQIIIDMTDGGA 224 (339)
Q Consensus 150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~-~vi~~~~~~~~~~~~~l~~~~~g~~ 224 (339)
..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++. +.. .+..... + ......++|
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~----~----~~~~~~~~f 226 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI----Y----LEQPIEGKA 226 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec----c----cccccCCCc
Confidence 45789999999986 777776665 5766999999999888777652 221 1111111 1 111223479
Q ss_pred cEEEEcCCCH---HHHHHHHHHhhcCCcEEEEeccC
Q 019535 225 DYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 225 d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
|+|+...... ..++.+.+.|+++ |.++..|..
T Consensus 227 DlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 227 DVIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred eEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 9999654333 3467788999998 999888754
No 147
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.69 E-value=0.00021 Score=56.35 Aligned_cols=75 Identities=24% Similarity=0.284 Sum_probs=55.2
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc--eEEeCCCCCCccHHHHHHHhcCCCccEE
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADYC 227 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~--~vi~~~~~~~~~~~~~l~~~~~g~~d~v 227 (339)
-.+.+++|+|+|++|++++..+...|+++|+.+.|+.++.+.+ +.++.. .++..++ +.+.+. .+|+|
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~-----~~Div 79 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ-----EADIV 79 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH-----TESEE
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh-----hCCeE
Confidence 3588999999999999999999999998899999998887666 445322 3444443 222222 48999
Q ss_pred EEcCCCHH
Q 019535 228 FECVGLAS 235 (339)
Q Consensus 228 ~d~~g~~~ 235 (339)
|+|++.+.
T Consensus 80 I~aT~~~~ 87 (135)
T PF01488_consen 80 INATPSGM 87 (135)
T ss_dssp EE-SSTTS
T ss_pred EEecCCCC
Confidence 99988753
No 148
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.69 E-value=0.00074 Score=55.28 Aligned_cols=104 Identities=20% Similarity=0.307 Sum_probs=73.2
Q ss_pred HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCceEEeCCCCCCccHHHHHHHhcC
Q 019535 146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTD 221 (339)
Q Consensus 146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~~~~~l~~~~~ 221 (339)
..+++++++.++-+|+|. |..++++++..-..+|++++++++..+..+ +||.+.+.-... +..+.+..+.
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g----~Ap~~L~~~~- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG----DAPEALPDLP- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec----cchHhhcCCC-
Confidence 456789999988889863 788888886555559999999999887764 478764432222 2222232221
Q ss_pred CCccEEEEcCCC--HHHHHHHHHHhhcCCcEEEEeccC
Q 019535 222 GGADYCFECVGL--ASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 222 g~~d~v~d~~g~--~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
.+|.+|---|. ...++.+|+.|+++ |++|.-...
T Consensus 102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait 137 (187)
T COG2242 102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT 137 (187)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence 59999954443 45689999999998 999887654
No 149
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.66 E-value=3.9e-05 Score=75.40 Aligned_cols=80 Identities=19% Similarity=0.271 Sum_probs=58.4
Q ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC---------------------hhHHHHHHhcCCceEEeCCCC
Q 019535 149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI---------------------SEKFEIGKRFGVTEFVNSKNC 207 (339)
Q Consensus 149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~---------------------~~~~~~~~~~ga~~vi~~~~~ 207 (339)
....+++|+|+|+|++|+++++.++..|+ +|++++.. ..+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~- 210 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV- 210 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence 36789999999999999999999999999 78888742 34566778899876665432
Q ss_pred CCccH-HHHHHHhcCCCccEEEEcCCCHH
Q 019535 208 GDKSV-SQIIIDMTDGGADYCFECVGLAS 235 (339)
Q Consensus 208 ~~~~~-~~~l~~~~~g~~d~v~d~~g~~~ 235 (339)
..+. .+.+ ..++|+||+++|...
T Consensus 211 -~~~~~~~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 211 -GEDITLEQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred -CCcCCHHHH----HhhCCEEEEeeCCCC
Confidence 0111 1222 126999999999754
No 150
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.61 E-value=0.0004 Score=65.42 Aligned_cols=91 Identities=21% Similarity=0.252 Sum_probs=71.0
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
-.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+.. . ++.+.++ ..|+|+.+
T Consensus 252 LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~--------~leell~-----~ADIVI~a 316 (476)
T PTZ00075 252 IAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V--------TLEDVVE-----TADIFVTA 316 (476)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c--------cHHHHHh-----cCCEEEEC
Confidence 468999999999999999999999999 8999988777665554556532 1 2222221 48999999
Q ss_pred CCCHHHHH-HHHHHhhcCCcEEEEeccC
Q 019535 231 VGLASLVQ-EAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 231 ~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 257 (339)
.|....+. ..++.|+++ +.++.+|..
T Consensus 317 tGt~~iI~~e~~~~MKpG-AiLINvGr~ 343 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNN-AIVGNIGHF 343 (476)
T ss_pred CCcccccCHHHHhccCCC-cEEEEcCCC
Confidence 99877664 899999997 999999865
No 151
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.51 E-value=0.0072 Score=54.02 Aligned_cols=138 Identities=9% Similarity=0.062 Sum_probs=85.6
Q ss_pred cccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCC---CCCCEEEEEcc-CHHHHHHHHHHH-HcCCCEE
Q 019535 106 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV---EVGSTVVIFGL-GSIGLAVAEGAR-LCGATRI 180 (339)
Q Consensus 106 ~~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~---~~~~~VLI~G~-G~iG~~a~~la~-~~G~~~V 180 (339)
.|-+|.++..+.... | ......+.+-| -+.|.|. +.+...- -..+.|+|.++ +-+++.++.+++ ..+.-++
T Consensus 90 ~YN~Y~r~~~d~~y~-~-~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYD-P-EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccC-c-chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 566676665543321 1 11122233334 5667765 3333322 22356777776 788888888877 4444489
Q ss_pred EEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 181 IGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 181 i~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+++. |+.+.++.+.+|. +.|+.|++ +..+.....-+++|..|+..+...+-+.+.+..-..+.+|..
T Consensus 166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~t 233 (314)
T PF11017_consen 166 VGLT-SARNVAFVESLGCYDEVLTYDD---------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGAT 233 (314)
T ss_pred EEEe-cCcchhhhhccCCceEEeehhh---------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEcc
Confidence 9988 5677779999994 68888876 223322345677899999998888888887752345666654
No 152
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.42 E-value=0.0028 Score=57.45 Aligned_cols=103 Identities=21% Similarity=0.285 Sum_probs=72.6
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHH----hcCCceEEeCCCCCCccHHHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIID 218 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~~~~~l~~ 218 (339)
+.+.+.++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .+..+.+..
T Consensus 72 ll~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~~ 146 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVPE 146 (322)
T ss_pred HHHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhcccc
Confidence 4456678899999999998 49999999998864 26999999988766654 35654432222 222221111
Q ss_pred hcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 219 MTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 219 ~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
.+.+|+|+.+.+.........+.|+++ |+++..
T Consensus 147 --~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 --FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred --cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 136999999888766567888999997 998774
No 153
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.42 E-value=0.0015 Score=60.93 Aligned_cols=110 Identities=17% Similarity=0.251 Sum_probs=75.9
Q ss_pred hhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHH
Q 019535 136 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQI 215 (339)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~ 215 (339)
+-...+..+.+..+++++++||.+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-++... .++.
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~~-- 223 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDYR-- 223 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cchh--
Confidence 334444556677788999999999986 47788888888898 9999999999999887643211111111 2221
Q ss_pred HHHhcCCCccEEEE-----cCCC---HHHHHHHHHHhhcCCcEEEEecc
Q 019535 216 IIDMTDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 216 l~~~~~g~~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
++ .+.+|.|+. .++. ...++.+.+.|+++ |.+++...
T Consensus 224 --~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i 268 (383)
T PRK11705 224 --DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI 268 (383)
T ss_pred --hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 11 347999874 3343 34578899999998 99988643
No 154
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.39 E-value=0.0035 Score=54.12 Aligned_cols=104 Identities=21% Similarity=0.201 Sum_probs=66.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hhc---CCceEEeCCCCCCccHHHHHHHhc--CCCc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTEFVNSKNCGDKSVSQIIIDMT--DGGA 224 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~---ga~~vi~~~~~~~~~~~~~l~~~~--~g~~ 224 (339)
++++|||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +.+ +..+.+..+-...+.+.+.+++.. -+++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4679999987 8999999999999999 999999988776555 222 222333221101122222222221 1368
Q ss_pred cEEEEcCCCH-----------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535 225 DYCFECVGLA-----------------------SLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 225 d~v~d~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
|.++.+.+.. ...+..++.+..+ |+++.++..
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 9999888642 1144556667776 899998864
No 155
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.38 E-value=0.0011 Score=56.55 Aligned_cols=78 Identities=22% Similarity=0.299 Sum_probs=59.2
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCC----ceEEeCCCCCCccHHHHHHHhcCC--Cc
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV----TEFVNSKNCGDKSVSQIIIDMTDG--GA 224 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga----~~vi~~~~~~~~~~~~~l~~~~~g--~~ 224 (339)
++.++|.|+ +++|.++++.....|+ +|+.+.|+.++++.+. +++. ...+|..+ ...+.+.+..+... .+
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCcc
Confidence 467889998 8999999999999999 9999999999988874 4662 34555555 23444455555444 69
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|+.++..|-
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999998875
No 156
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.37 E-value=0.0038 Score=52.61 Aligned_cols=102 Identities=20% Similarity=0.405 Sum_probs=70.1
Q ss_pred HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHH----hcC-CceEEeCCCCCCccHHHHHHHh
Q 019535 146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFG-VTEFVNSKNCGDKSVSQIIIDM 219 (339)
Q Consensus 146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~~g-a~~vi~~~~~~~~~~~~~l~~~ 219 (339)
...++.++++||.+|+|. |.+++.+++..+. .+|++++.+++..+.++ .++ ...+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence 456788999999999987 8888899887642 38999999998887664 355 23222111 2222323222
Q ss_pred cCCCccEEEEcCCC---HHHHHHHHHHhhcCCcEEEEe
Q 019535 220 TDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 220 ~~g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 254 (339)
.+.+|.||...+. ...++.+.+.|+++ |+++..
T Consensus 109 -~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 -NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred -CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2379999985543 34578888999997 998853
No 157
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0039 Score=55.24 Aligned_cols=77 Identities=21% Similarity=0.346 Sum_probs=54.1
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcC--CCccEEEE
Q 019535 154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADYCFE 229 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~--g~~d~v~d 229 (339)
.++||.|+ |.+|...++.+...|+ +|++++++.++.+.+...+...+ .|..+ .+.+.+.+..... +++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 46899987 8999999999999999 99999998877776665554332 45444 1233333333322 37999999
Q ss_pred cCCC
Q 019535 230 CVGL 233 (339)
Q Consensus 230 ~~g~ 233 (339)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9873
No 158
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.28 E-value=0.0022 Score=53.09 Aligned_cols=90 Identities=30% Similarity=0.353 Sum_probs=62.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
-.+.+|.|+|.|.+|+..++.++.+|+ +|++.+++....+.....+.. . .++.+.+.+ .|+|+.+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~----~-----~~l~ell~~-----aDiv~~~ 98 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE----Y-----VSLDELLAQ-----ADIVSLH 98 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE----E-----SSHHHHHHH------SEEEE-
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce----e-----eehhhhcch-----hhhhhhh
Confidence 358999999999999999999999999 999999988776644444431 1 234443433 6899887
Q ss_pred CCCH-----HHHHHHHHHhhcCCcEEEEecc
Q 019535 231 VGLA-----SLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 231 ~g~~-----~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
.+.. ..-...+..|+++ ..+|.++.
T Consensus 99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred hccccccceeeeeeeeeccccc-eEEEeccc
Confidence 7632 1234667788886 77777653
No 159
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=97.28 E-value=0.0045 Score=52.56 Aligned_cols=111 Identities=18% Similarity=0.194 Sum_probs=78.5
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID 218 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~ 218 (339)
+...++.+...+||-+|++ +|..++.+|..+. -.+++.+++++++.+.+++ .|....+..-. ..+..+.+.+
T Consensus 51 L~~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~--~gdal~~l~~ 127 (219)
T COG4122 51 LRLLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL--GGDALDVLSR 127 (219)
T ss_pred HHHHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe--cCcHHHHHHh
Confidence 3445566788899999864 5888889998886 3389999999999888865 56544222111 0366666666
Q ss_pred hcCCCccEEE-EcCC--CHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 219 MTDGGADYCF-ECVG--LASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 219 ~~~g~~d~v~-d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
...+.||+|| |+.- .+..++.+++.|+++ |.++.=....
T Consensus 128 ~~~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl~ 169 (219)
T COG4122 128 LLDGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVLF 169 (219)
T ss_pred ccCCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeeccc
Confidence 4445999998 7664 456699999999997 8777655443
No 160
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.20 E-value=0.0036 Score=53.09 Aligned_cols=101 Identities=14% Similarity=0.167 Sum_probs=68.7
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQI 215 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~ 215 (339)
+.+.+.++++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++ .+.. .++..+. .+.
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~------~~~ 136 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG------KRG 136 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc------ccC
Confidence 45667788899999999874 778888888764 2289999999887766643 4432 2332221 111
Q ss_pred HHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 216 IIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 216 l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
+. ..+.||.|+-+.......+.+.+.|+++ |+++..
T Consensus 137 ~~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 137 LE--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred Cc--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 11 1137999997666555567888999998 998764
No 161
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.16 E-value=0.00096 Score=56.58 Aligned_cols=107 Identities=20% Similarity=0.259 Sum_probs=71.6
Q ss_pred hhhhhhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHH----hcCCceE--EeCCCCC
Q 019535 136 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGK----RFGVTEF--VNSKNCG 208 (339)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~----~~ga~~v--i~~~~~~ 208 (339)
+...|. +.+.+.++++++||.+|+|. |..++-+++..|.. +|+.+++.++-.+.++ .++...+ +..+.
T Consensus 58 P~~~a~--~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg-- 132 (209)
T PF01135_consen 58 PSMVAR--MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG-- 132 (209)
T ss_dssp HHHHHH--HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G--
T ss_pred HHHHHH--HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch--
Confidence 444443 56778899999999999874 88999999988753 6999998887665554 3565432 22221
Q ss_pred CccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 209 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 209 ~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
. .-+... +||.|+-+.+-+..-...++.|+++ |++|..-
T Consensus 133 ----~---~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi 172 (209)
T PF01135_consen 133 ----S---EGWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPI 172 (209)
T ss_dssp ----G---GTTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEE
T ss_pred ----h---hccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEE
Confidence 1 111223 8999998887777567899999998 9998853
No 162
>PRK04148 hypothetical protein; Provisional
Probab=97.15 E-value=0.0026 Score=49.58 Aligned_cols=88 Identities=19% Similarity=0.277 Sum_probs=60.2
Q ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535 149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF 228 (339)
Q Consensus 149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~ 228 (339)
...++.+++++|.| .|...++.+...|. .|++++.+++..+.+++.+...+.+.-- ..+. .+. +++|+|+
T Consensus 13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~y----~~a~liy 82 (134)
T PRK04148 13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EIY----KNAKLIY 82 (134)
T ss_pred ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HHH----hcCCEEE
Confidence 33456789999998 78755656667899 9999999999999888887654443211 1111 111 2689999
Q ss_pred EcCCCHHHHHHHHHHhhc
Q 019535 229 ECVGLASLVQEAYACCRK 246 (339)
Q Consensus 229 d~~g~~~~~~~~~~~l~~ 246 (339)
.+-..++...-.+++...
T Consensus 83 sirpp~el~~~~~~la~~ 100 (134)
T PRK04148 83 SIRPPRDLQPFILELAKK 100 (134)
T ss_pred EeCCCHHHHHHHHHHHHH
Confidence 888888855555555544
No 163
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.14 E-value=0.0071 Score=50.45 Aligned_cols=79 Identities=23% Similarity=0.257 Sum_probs=59.1
Q ss_pred CCCEEEEEcc--CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCC-ceEEeCCCCCCcc---HHHHHHHhcCCCc
Q 019535 152 VGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV-TEFVNSKNCGDKS---VSQIIIDMTDGGA 224 (339)
Q Consensus 152 ~~~~VLI~G~--G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga-~~vi~~~~~~~~~---~~~~l~~~~~g~~ 224 (339)
....|||.|+ |+||.+.+.=....|+ +|+++.++-+....+. ++|- ..-+|..+ +++ +..+++....|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~--~~~V~~v~~evr~~~~Gkl 82 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSK--PEEVVTVSGEVRANPDGKL 82 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCC--hHHHHHHHHHHhhCCCCce
Confidence 4568999975 8999999988889999 9999999988887775 6673 33455544 233 3345556666799
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|+.++.+|.
T Consensus 83 d~L~NNAG~ 91 (289)
T KOG1209|consen 83 DLLYNNAGQ 91 (289)
T ss_pred EEEEcCCCC
Confidence 999997775
No 164
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.11 E-value=0.0088 Score=49.93 Aligned_cols=99 Identities=19% Similarity=0.174 Sum_probs=63.3
Q ss_pred cCCCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHHHhcCC-Cc
Q 019535 148 ANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDG-GA 224 (339)
Q Consensus 148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g-~~ 224 (339)
..++++++||.+|+|+-+ .+..+++.. +..+|++++.++.+ +..+...+ .+..+ .+..+.+.+...+ ++
T Consensus 28 ~~i~~g~~VLDiG~GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDKV 99 (188)
T ss_pred cccCCCCEEEEecCCCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCCc
Confidence 446889999999987644 444444443 43489999998754 11233322 23333 3445556655555 89
Q ss_pred cEEEE-cC----CC------------HHHHHHHHHHhhcCCcEEEEec
Q 019535 225 DYCFE-CV----GL------------ASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 225 d~v~d-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g 255 (339)
|+|+. .. |. ...++.+.++|+++ |+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 99994 32 21 34578899999997 9998864
No 165
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.08 E-value=0.006 Score=56.28 Aligned_cols=96 Identities=17% Similarity=0.159 Sum_probs=69.2
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC---C-ceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535 154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---V-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 229 (339)
Q Consensus 154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g---a-~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d 229 (339)
.+|||+|+|.+|+.+++.+.+.+-.+|+..++++++.+.+.... . ...+|..+ .+.+.+.+ . ++|+||+
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d--~~al~~li----~-~~d~VIn 74 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD--VDALVALI----K-DFDLVIN 74 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC--hHHHHHHH----h-cCCEEEE
Confidence 46999999999999999988888449999999999988886653 2 24455544 12222222 2 3599999
Q ss_pred cCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 230 CVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 230 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
|.+.....+.+-.|+..+ -.++.+...
T Consensus 75 ~~p~~~~~~i~ka~i~~g-v~yvDts~~ 101 (389)
T COG1748 75 AAPPFVDLTILKACIKTG-VDYVDTSYY 101 (389)
T ss_pred eCCchhhHHHHHHHHHhC-CCEEEcccC
Confidence 999888666666667665 677777654
No 166
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.08 E-value=0.0026 Score=48.00 Aligned_cols=94 Identities=23% Similarity=0.304 Sum_probs=62.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHHH-cCCCEEEEEcCChhHHHHHHhc----CC-ceEEeCCCCCCccHHHHHHHhcCCCcc
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRF----GV-TEFVNSKNCGDKSVSQIIIDMTDGGAD 225 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~-~G~~~Vi~~~~~~~~~~~~~~~----ga-~~vi~~~~~~~~~~~~~l~~~~~g~~d 225 (339)
++.+||-+|+|. |..++.+++. .++ +|++++.+++..+.+++. +. +++- ... .++ . ......++||
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~-~~~---~d~-~-~~~~~~~~~D 72 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRIT-FVQ---GDA-E-FDPDFLEPFD 72 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEE-EEE---SCC-H-GGTTTSSCEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeE-EEE---Ccc-c-cCcccCCCCC
Confidence 578999999874 8888888884 577 999999999988887652 21 2221 111 233 1 1111122799
Q ss_pred EEEEcC-CC---H------HHHHHHHHHhhcCCcEEEEe
Q 019535 226 YCFECV-GL---A------SLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 226 ~v~d~~-g~---~------~~~~~~~~~l~~~~G~~v~~ 254 (339)
+|+... .. . ..++.+.+.|+++ |+++.-
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 73 LVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 999766 21 1 2378899999997 988753
No 167
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.07 E-value=0.019 Score=47.39 Aligned_cols=93 Identities=18% Similarity=0.247 Sum_probs=64.0
Q ss_pred EEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC-
Q 019535 156 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL- 233 (339)
Q Consensus 156 VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~- 233 (339)
|+|.|+ |.+|...++.+...|. +|+++++++++.+. ..+.. ++..+- .+. +.+.+... ++|+||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~---~d~-~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL---FDP-DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT---TCH-HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee---hhh-hhhhhhhh-hcchhhhhhhhh
Confidence 789997 9999999999999998 99999999988776 33333 333333 233 33333332 69999999984
Q ss_pred ---HHHHHHHHHHhhcC-CcEEEEeccC
Q 019535 234 ---ASLVQEAYACCRKG-WGKTIVLGVD 257 (339)
Q Consensus 234 ---~~~~~~~~~~l~~~-~G~~v~~g~~ 257 (339)
....+..++.+... -.+++.++..
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccccccccceeeecc
Confidence 33366666666553 1377777654
No 168
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=97.06 E-value=0.0042 Score=55.49 Aligned_cols=96 Identities=23% Similarity=0.363 Sum_probs=58.8
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC-ceEEeCCCCCCccHHHHHHHhcCCCc
Q 019535 150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMTDGGA 224 (339)
Q Consensus 150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga-~~vi~~~~~~~~~~~~~l~~~~~g~~ 224 (339)
..++++||-+|+|. |.+++..++ +|+++|++++.++...+.++. .|. ..+.-... .+. ..+.|
T Consensus 159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~---~~~-------~~~~~ 226 (295)
T PF06325_consen 159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLS---EDL-------VEGKF 226 (295)
T ss_dssp SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCT---SCT-------CCS-E
T ss_pred ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEe---ccc-------ccccC
Confidence 56789999998752 444443333 499899999999887666644 332 22211111 111 11479
Q ss_pred cEEEEcCCCHHH---HHHHHHHhhcCCcEEEEeccCC
Q 019535 225 DYCFECVGLASL---VQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 225 d~v~d~~g~~~~---~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+|+-.+-.... .....+.++++ |.+++.|...
T Consensus 227 dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 227 DLVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp EEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred CEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 999966655442 44556678897 9999999863
No 169
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0055 Score=54.46 Aligned_cols=78 Identities=18% Similarity=0.285 Sum_probs=55.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccHHHHHH---HhcCCCccE
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIII---DMTDGGADY 226 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~~~~l~---~~~~g~~d~ 226 (339)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+...+...+ .|..+ .+.+.+.+. +...+.+|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCCCccE
Confidence 3568999987 9999999999888999 99999999888877766554332 34443 122222222 223357999
Q ss_pred EEEcCC
Q 019535 227 CFECVG 232 (339)
Q Consensus 227 v~d~~g 232 (339)
+|+++|
T Consensus 80 li~~Ag 85 (277)
T PRK05993 80 LFNNGA 85 (277)
T ss_pred EEECCC
Confidence 999876
No 170
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.02 E-value=0.011 Score=45.21 Aligned_cols=102 Identities=22% Similarity=0.318 Sum_probs=67.9
Q ss_pred HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHHH
Q 019535 145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIID 218 (339)
Q Consensus 145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~~ 218 (339)
.....+.++.+||-+|+|. |..+..+++..+..+|++++.++...+.+++ ++.. .++..+. .. .+..
T Consensus 12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~---~~~~ 84 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PE---ALED 84 (124)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---cc---cChh
Confidence 3445667788999999876 8888888888754489999999888777643 3432 2222211 11 0111
Q ss_pred hcCCCccEEEEcCCC---HHHHHHHHHHhhcCCcEEEEec
Q 019535 219 MTDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 219 ~~~g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~g 255 (339)
..+.+|+|+...+. ...++.+.+.|+++ |+++.-.
T Consensus 85 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 85 -SLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred -hcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 11379999965432 33588999999997 9987653
No 171
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.01 E-value=0.012 Score=50.28 Aligned_cols=101 Identities=18% Similarity=0.274 Sum_probs=70.1
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQII 216 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l 216 (339)
+...+.++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++ .|.. .++..+. . +
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~---~---~-- 138 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG---T---L-- 138 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc---c---c--
Confidence 55667889999999999874 7788888887753 289999999988777654 3432 2232221 0 0
Q ss_pred HHhcC-CCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 217 IDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 217 ~~~~~-g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
.+.. +.||+|+-........+..++.|+++ |+++..-
T Consensus 139 -~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~~ 176 (212)
T PRK13942 139 -GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIPV 176 (212)
T ss_pred -CCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEEE
Confidence 1112 37999986555555577889999998 9988753
No 172
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.98 E-value=0.0046 Score=51.29 Aligned_cols=78 Identities=21% Similarity=0.282 Sum_probs=57.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC---CceEEeCCCCCCccHHHHHHHh-cCC--Cc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---VTEFVNSKNCGDKSVSQIIIDM-TDG--GA 224 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g---a~~vi~~~~~~~~~~~~~l~~~-~~g--~~ 224 (339)
.|.+|||.|+ +++|+..++-...+|- +||...|+.++++.+++.- ...+.|..+ .+-.+++.++ .+. ..
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYPNL 79 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCCch
Confidence 4679999965 7999999999999998 9999999999999887632 245666665 4433333332 223 57
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
+++++++|-
T Consensus 80 NvliNNAGI 88 (245)
T COG3967 80 NVLINNAGI 88 (245)
T ss_pred heeeecccc
Confidence 999998884
No 173
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.93 E-value=0.0073 Score=52.84 Aligned_cols=79 Identities=24% Similarity=0.315 Sum_probs=57.0
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c----CCc-eE--EeCCCCCCccHHHHHHH-hc
Q 019535 151 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EF--VNSKNCGDKSVSQIIID-MT 220 (339)
Q Consensus 151 ~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~----ga~-~v--i~~~~~~~~~~~~~l~~-~~ 220 (339)
..+.++||.|+ ++||...+..+...|. +++.+.|+.++++.+.+ + |.. .+ +|..+ .+-.+.+.. +.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~---~~~~~~l~~~l~ 79 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD---PEALERLEDELK 79 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC---hhHHHHHHHHHH
Confidence 45789999998 8999999999999999 99999999999887743 2 321 23 33333 333444433 32
Q ss_pred -CC-CccEEEEcCCC
Q 019535 221 -DG-GADYCFECVGL 233 (339)
Q Consensus 221 -~g-~~d~v~d~~g~ 233 (339)
.+ .+|+.++++|-
T Consensus 80 ~~~~~IdvLVNNAG~ 94 (265)
T COG0300 80 ERGGPIDVLVNNAGF 94 (265)
T ss_pred hcCCcccEEEECCCc
Confidence 22 79999999985
No 174
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0068 Score=51.98 Aligned_cols=77 Identities=14% Similarity=0.193 Sum_probs=51.9
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE--EeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF--VNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v--i~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
.+++|.|+ |.+|...++.+...|+ +|+++++++++.+.+++++...+ .|..+ .+.+.+.+..+..+++|++|.+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhcCCCCEEEEc
Confidence 46899987 9999999988888999 99999998877666655442222 33333 1223333333333389999988
Q ss_pred CCC
Q 019535 231 VGL 233 (339)
Q Consensus 231 ~g~ 233 (339)
+|.
T Consensus 79 ag~ 81 (225)
T PRK08177 79 AGI 81 (225)
T ss_pred Ccc
Confidence 754
No 175
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.87 E-value=0.011 Score=52.18 Aligned_cols=108 Identities=20% Similarity=0.335 Sum_probs=76.5
Q ss_pred hhHHHHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccH
Q 019535 140 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSV 212 (339)
Q Consensus 140 a~~al~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~ 212 (339)
.+..+.+.+++++|.+||-+|+|- |.+++..|+..|+ +|++++-|++..+.+++ .|.. .+.- .++
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l------~d~ 131 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRL------QDY 131 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEe------ccc
Confidence 344467888999999999999875 7788888889999 99999999998877754 4533 1211 111
Q ss_pred HHHHHHhcCCCccEEE-----EcCCC---HHHHHHHHHHhhcCCcEEEEeccCCCCC
Q 019535 213 SQIIIDMTDGGADYCF-----ECVGL---ASLVQEAYACCRKGWGKTIVLGVDQPGS 261 (339)
Q Consensus 213 ~~~l~~~~~g~~d~v~-----d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~ 261 (339)
. ... +.||-|+ +.+|. +.-++.+.+.|+++ |++++.......+
T Consensus 132 r----d~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~~ 182 (283)
T COG2230 132 R----DFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPDQ 182 (283)
T ss_pred c----ccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCCc
Confidence 1 111 1377764 35554 34488999999998 9999988765443
No 176
>PRK14967 putative methyltransferase; Provisional
Probab=96.83 E-value=0.088 Score=45.18 Aligned_cols=98 Identities=18% Similarity=0.202 Sum_probs=64.1
Q ss_pred HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eEEeCCCCCCccHHHHHHHhc
Q 019535 146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT 220 (339)
Q Consensus 146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~vi~~~~~~~~~~~~~l~~~~ 220 (339)
....++++++||..|+|. |..++.+++. +..+|++++.+++..+.+++ .+.. .+++ .++.+.+ .
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~------~d~~~~~---~ 98 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR------GDWARAV---E 98 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE------Cchhhhc---c
Confidence 344577889999999986 8888888775 55589999999988776644 3432 2222 2232211 1
Q ss_pred CCCccEEEEcCCC---------------------------HHHHHHHHHHhhcCCcEEEEec
Q 019535 221 DGGADYCFECVGL---------------------------ASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 221 ~g~~d~v~d~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~g 255 (339)
.+.||+|+...+- ...++.+.+.|+++ |+++.+-
T Consensus 99 ~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~ 159 (223)
T PRK14967 99 FRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ 159 (223)
T ss_pred CCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 2379999864210 11245678899997 9988763
No 177
>PRK12742 oxidoreductase; Provisional
Probab=96.82 E-value=0.037 Score=47.62 Aligned_cols=101 Identities=23% Similarity=0.286 Sum_probs=61.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHHH-HhcCCceE-EeCCCCCCccHHHHHHHhcCCCccEE
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYC 227 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~-~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v 227 (339)
.++++||+|+ |.+|..+++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+ ...+.+.+.+ .+++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~--~~~id~l 79 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRK--SGALDIL 79 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHH--hCCCcEE
Confidence 3678999987 8999999999999999 7877654 44444433 34554322 23322 1222233322 1369999
Q ss_pred EEcCCCHH-------------------------HHHHHHHHhhcCCcEEEEeccCC
Q 019535 228 FECVGLAS-------------------------LVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 228 ~d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+++|... ....++..+... |+++.++...
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 134 (237)
T PRK12742 80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN 134 (237)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence 99886410 013444556665 8999887643
No 178
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.81 E-value=0.015 Score=48.55 Aligned_cols=97 Identities=19% Similarity=0.232 Sum_probs=62.9
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhcCCCcc
Q 019535 150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDGGAD 225 (339)
Q Consensus 150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d 225 (339)
+.++.+||-+|+|. |..++.+++.....+|++++.+++..+.+++ .+... +.... .+..+ +.. .+.||
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~---~d~~~-~~~--~~~fD 114 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVH---GRAEE-FGQ--EEKFD 114 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEe---ccHhh-CCC--CCCcc
Confidence 44588999998863 6666666665543399999999887777653 44432 22222 22222 111 23899
Q ss_pred EEEEc-CCC-HHHHHHHHHHhhcCCcEEEEec
Q 019535 226 YCFEC-VGL-ASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 226 ~v~d~-~g~-~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+|+-. ... ...++.+.+.|+++ |+++.+-
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 99953 322 35578899999998 9998884
No 179
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.81 E-value=0.024 Score=48.95 Aligned_cols=109 Identities=20% Similarity=0.341 Sum_probs=76.0
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHh
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM 219 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~ 219 (339)
+....+..+|++||-+|+| +|-.++.+++..|-.+|++++.+++.++.+++ .|... +..-. .+ ++.+ ..
T Consensus 43 ~i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~---~d-Ae~L-Pf 115 (238)
T COG2226 43 LISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV---GD-AENL-PF 115 (238)
T ss_pred HHHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE---ec-hhhC-CC
Confidence 4555666789999999876 48999999999986699999999999888865 22221 11111 11 1111 12
Q ss_pred cCCCccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEeccCCCC
Q 019535 220 TDGGADYCFECVG------LASLVQEAYACCRKGWGKTIVLGVDQPG 260 (339)
Q Consensus 220 ~~g~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 260 (339)
-+..||++.-+.| -..+++++.+.|.|+ |+++.+......
T Consensus 116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p~ 161 (238)
T COG2226 116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKPD 161 (238)
T ss_pred CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCCC
Confidence 2237899876554 255699999999998 999999876543
No 180
>PRK00536 speE spermidine synthase; Provisional
Probab=96.78 E-value=0.0063 Score=53.30 Aligned_cols=100 Identities=12% Similarity=-0.043 Sum_probs=68.2
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCC-ceEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCF 228 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga-~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~ 228 (339)
...++|||+|+|- |.++-.++|.- . +|+.++.+++-.+.+++ +.. ...++... -.+...+.+...+.||+||
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~-~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~~~fDVII 144 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD-T-HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDIKKYDLII 144 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC-C-eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccCCcCCEEE
Confidence 4568999998764 55666777775 3 89999999988888887 321 11122222 2222234443334799998
Q ss_pred -EcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 229 -ECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 229 -d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
|+...+.-.+.+.++|+++ |.++.-+..
T Consensus 145 vDs~~~~~fy~~~~~~L~~~-Gi~v~Qs~s 173 (262)
T PRK00536 145 CLQEPDIHKIDGLKRMLKED-GVFISVAKH 173 (262)
T ss_pred EcCCCChHHHHHHHHhcCCC-cEEEECCCC
Confidence 7677776688999999998 998887643
No 181
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.76 E-value=0.034 Score=49.15 Aligned_cols=109 Identities=23% Similarity=0.300 Sum_probs=71.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce---E--EeCCCCCCccHHHHHHHh--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE---F--VNSKNCGDKSVSQIIIDM-- 219 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~---v--i~~~~~~~~~~~~~l~~~-- 219 (339)
.++.|+|.|+ ++||.+++.-.-..|+ +++.+.+..++++.+ ++.+... + +|..+ .++..+.+.+.
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~--~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD--EESVKKFVEWAIR 87 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC--HHHHHHHHHHHHH
Confidence 5788999998 7999999888888999 788888888777666 3344322 2 23333 23333333222
Q ss_pred cCCCccEEEEcCCC-------------------------HHHHHHHHHHhhcCC-cEEEEeccCCCCCcc
Q 019535 220 TDGGADYCFECVGL-------------------------ASLVQEAYACCRKGW-GKTIVLGVDQPGSQL 263 (339)
Q Consensus 220 ~~g~~d~v~d~~g~-------------------------~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~ 263 (339)
.-|++|+.++.+|- -...+.++..|...+ |++|.++...+-...
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~ 157 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL 157 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC
Confidence 12489999998775 123566777777755 899999876544333
No 182
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.75 E-value=0.0093 Score=56.06 Aligned_cols=76 Identities=16% Similarity=0.115 Sum_probs=54.2
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 229 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d 229 (339)
-.+.+|||+|+|.+|.+++..+...|+++++++.++.++.+.+ ..++...++.. +.+.+.. ..+|+||+
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---------~~l~~~l-~~aDiVI~ 248 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---------SELPQLI-KKADIIIA 248 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---------HHHHHHh-ccCCEEEE
Confidence 3578999999999999999999999987899999998775554 44542222221 1122211 24899999
Q ss_pred cCCCHHH
Q 019535 230 CVGLASL 236 (339)
Q Consensus 230 ~~g~~~~ 236 (339)
|++.+..
T Consensus 249 aT~a~~~ 255 (414)
T PRK13940 249 AVNVLEY 255 (414)
T ss_pred CcCCCCe
Confidence 9998763
No 183
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.75 E-value=0.033 Score=54.10 Aligned_cols=105 Identities=13% Similarity=0.132 Sum_probs=66.6
Q ss_pred HhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---------cCC-----ceE--EeCCCCC
Q 019535 146 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---------FGV-----TEF--VNSKNCG 208 (339)
Q Consensus 146 ~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---------~ga-----~~v--i~~~~~~ 208 (339)
...+.+.+.+|||.|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ .|. ..+ .|..+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-- 149 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-- 149 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC--
Confidence 3456678899999987 9999999999988999 89999998877654321 121 112 22222
Q ss_pred CccHHHHHHHhcCCCccEEEEcCCCHH---------------HHHHHHHHhhcC-CcEEEEeccCC
Q 019535 209 DKSVSQIIIDMTDGGADYCFECVGLAS---------------LVQEAYACCRKG-WGKTIVLGVDQ 258 (339)
Q Consensus 209 ~~~~~~~l~~~~~g~~d~v~d~~g~~~---------------~~~~~~~~l~~~-~G~~v~~g~~~ 258 (339)
.+.+.+.. +++|+||+++|... ....+++.+... .++||.++...
T Consensus 150 ----~esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 150 ----PDQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred ----HHHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 12333332 36899999987531 123334444332 26899887653
No 184
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.74 E-value=0.018 Score=46.99 Aligned_cols=97 Identities=20% Similarity=0.227 Sum_probs=63.5
Q ss_pred cccccchhhhhhHHHHHhcCCCCCCEEEEEccCH-HHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCC
Q 019535 130 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 208 (339)
Q Consensus 130 aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~G~-iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~ 208 (339)
....||....+...+.+...--.+.+|||+|+|. +|..++..+...|+ +|+++.++.
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~--------------------- 78 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT--------------------- 78 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc---------------------
Confidence 3455654444444333333335789999999986 59989999999999 788777542
Q ss_pred CccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 209 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 209 ~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+++.+.+. .+|+||.+++.+..+.. +.+.++ -.+++++..
T Consensus 79 -~~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~p 118 (168)
T cd01080 79 -KNLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGIN 118 (168)
T ss_pred -hhHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCC
Confidence 12223332 37999999998763333 346665 677777764
No 185
>PRK08017 oxidoreductase; Provisional
Probab=96.73 E-value=0.0067 Score=52.99 Aligned_cols=77 Identities=23% Similarity=0.325 Sum_probs=54.4
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-EeCCCCCCccH---HHHHHHhcCCCccEEE
Q 019535 154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSV---SQIIIDMTDGGADYCF 228 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~~~~~~~~~~---~~~l~~~~~g~~d~v~ 228 (339)
+++||.|+ |.+|..+++.+...|+ +|+++.++.++.+.+++.++..+ .|..+ ...+ .+.+.+...+.+|.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCCCCeEEE
Confidence 57999987 9999999999999999 89999999888877777775433 34333 1222 2233333334789999
Q ss_pred EcCCC
Q 019535 229 ECVGL 233 (339)
Q Consensus 229 d~~g~ 233 (339)
.+.|.
T Consensus 80 ~~ag~ 84 (256)
T PRK08017 80 NNAGF 84 (256)
T ss_pred ECCCC
Confidence 88763
No 186
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.01 Score=54.35 Aligned_cols=79 Identities=25% Similarity=0.311 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce---EEeCCCCCCccHHHHHHHh--cC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE---FVNSKNCGDKSVSQIIIDM--TD 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~---vi~~~~~~~~~~~~~l~~~--~~ 221 (339)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++.|... ..|..+ .+.+.+.+.+. ..
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence 4678999987 8999999999999999 899999988776543 3345432 234333 12222222221 12
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|+++|.
T Consensus 83 g~iD~lVnnAG~ 94 (330)
T PRK06139 83 GRIDVWVNNVGV 94 (330)
T ss_pred CCCCEEEECCCc
Confidence 479999999873
No 187
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.032 Score=48.06 Aligned_cols=79 Identities=19% Similarity=0.264 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcC---CceEE--eCCCCCCccHHHHHHHhcC--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG---VTEFV--NSKNCGDKSVSQIIIDMTD--G 222 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~g---a~~vi--~~~~~~~~~~~~~l~~~~~--g 222 (339)
.+.+++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++. ..+.+ |..+ ...+.+.+.+... +
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD--EADVQRAVDAIVAAFG 81 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence 3578999987 9999999988888899 899999888765544 3332 11222 3222 1233333333321 3
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
++|++|++.|.
T Consensus 82 ~~d~vi~~ag~ 92 (237)
T PRK07326 82 GLDVLIANAGV 92 (237)
T ss_pred CCCEEEECCCC
Confidence 79999998764
No 188
>PRK00811 spermidine synthase; Provisional
Probab=96.70 E-value=0.013 Score=52.22 Aligned_cols=98 Identities=12% Similarity=0.153 Sum_probs=64.6
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-C-----C---ceEEeCCCCCCccHHHHHHHhcC
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-G-----V---TEFVNSKNCGDKSVSQIIIDMTD 221 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-g-----a---~~vi~~~~~~~~~~~~~l~~~~~ 221 (339)
..+++||++|+|. |..+..+++..+.++|++++.+++-.+.+++. . . .++ .... .+..+.+.. ..
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv-~v~~---~Da~~~l~~-~~ 148 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRV-ELVI---GDGIKFVAE-TE 148 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCce-EEEE---CchHHHHhh-CC
Confidence 3567999998864 77777777776766999999999988888763 1 1 111 1111 344444443 33
Q ss_pred CCccEEEE-cCCC---------HHHHHHHHHHhhcCCcEEEEec
Q 019535 222 GGADYCFE-CVGL---------ASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 222 g~~d~v~d-~~g~---------~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+.+|+||- +... ...++.+.+.|+++ |.++...
T Consensus 149 ~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 149 NSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred CcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 48999984 3211 23357888999998 9988754
No 189
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.69 E-value=0.025 Score=45.57 Aligned_cols=97 Identities=21% Similarity=0.305 Sum_probs=60.3
Q ss_pred HHHhcC-CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC
Q 019535 144 AWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG 222 (339)
Q Consensus 144 l~~~~~-~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g 222 (339)
+.+..+ .-.|++++|.|-|.+|.-.++.++.+|+ +|++++.+|-+.-.+.--|.. +. .+.+.+ .
T Consensus 13 i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~--------~~~~a~-----~ 77 (162)
T PF00670_consen 13 IMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM--------TLEEAL-----R 77 (162)
T ss_dssp HHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE---------HHHHT-----T
T ss_pred HHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec--------CHHHHH-----h
Confidence 444444 3468889999999999999999999999 999999998766555555543 22 222222 2
Q ss_pred CccEEEEcCCCHHH-HHHHHHHhhcCCcEEEEecc
Q 019535 223 GADYCFECVGLASL-VQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 223 ~~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~ 256 (339)
..|++|.++|.... ..+-++.|+++ -.+...|.
T Consensus 78 ~adi~vtaTG~~~vi~~e~~~~mkdg-ail~n~Gh 111 (162)
T PF00670_consen 78 DADIFVTATGNKDVITGEHFRQMKDG-AILANAGH 111 (162)
T ss_dssp T-SEEEE-SSSSSSB-HHHHHHS-TT-EEEEESSS
T ss_pred hCCEEEECCCCccccCHHHHHHhcCC-eEEeccCc
Confidence 47999999998763 45778889885 44444444
No 190
>PLN02476 O-methyltransferase
Probab=96.69 E-value=0.017 Score=51.11 Aligned_cols=107 Identities=17% Similarity=0.190 Sum_probs=71.4
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID 218 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~ 218 (339)
+....+....++||-+|++ +|..++.+|+.++. .+|+.++.+++..+.+++ .|..+-+.... .+..+.+.+
T Consensus 110 L~~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~ 185 (278)
T PLN02476 110 LAMLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKS 185 (278)
T ss_pred HHHHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHH
Confidence 4445566778999999974 47777888887642 279999999988777754 56543233222 455555554
Q ss_pred hc----CCCccEEE-EcCCC--HHHHHHHHHHhhcCCcEEEEec
Q 019535 219 MT----DGGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 219 ~~----~g~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+. .+.||.|| |+--. ...++.+++.++++ |.++.=.
T Consensus 186 l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DN 228 (278)
T PLN02476 186 MIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDN 228 (278)
T ss_pred HHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEec
Confidence 42 23799998 55432 44588999999997 8876543
No 191
>PRK06182 short chain dehydrogenase; Validated
Probab=96.67 E-value=0.011 Score=52.27 Aligned_cols=78 Identities=19% Similarity=0.268 Sum_probs=54.6
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce-EEeCCCCCCccHHHHHHHhc--CCCccEEE
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGGADYCF 228 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~-vi~~~~~~~~~~~~~l~~~~--~g~~d~v~ 228 (339)
+.+++|.|+ |.+|...++.+...|+ +|+++++++++.+.+...+... ..|..+ .+.+.+.+.+.. .+++|++|
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEE
Confidence 568999987 8999999999888999 9999999888776665545432 244444 233333333322 23799999
Q ss_pred EcCCC
Q 019535 229 ECVGL 233 (339)
Q Consensus 229 d~~g~ 233 (339)
++.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 98874
No 192
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.67 E-value=0.0053 Score=52.46 Aligned_cols=101 Identities=18% Similarity=0.210 Sum_probs=67.7
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQII 216 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l 216 (339)
+.+.+.++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++ +|.+. ++..+ ..+..
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d------~~~~~ 141 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD------GTQGW 141 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC------cccCC
Confidence 55667789999999999874 7777788887653 269999999887776643 44332 22211 11111
Q ss_pred HHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 217 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 217 ~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
. ..+.||+|+-........+.+.+.|+++ |+++..
T Consensus 142 ~--~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 142 E--PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred c--ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 0 1137999985544445467888999998 998775
No 193
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.67 E-value=0.018 Score=49.98 Aligned_cols=79 Identities=19% Similarity=0.186 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcC--Cc-eE--EeCCCCCCccHHHHHHHhc--CC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG--VT-EF--VNSKNCGDKSVSQIIIDMT--DG 222 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~g--a~-~v--i~~~~~~~~~~~~~l~~~~--~g 222 (339)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .+. .. .+ .|..+ ...+...+.+.. .+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 80 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD--EADVEAAVAAALERFG 80 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 3568999987 9999999988888899 8999999887655442 222 11 12 22222 222333333221 13
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
.+|++|.+.|.
T Consensus 81 ~~d~vi~~ag~ 91 (251)
T PRK07231 81 SVDILVNNAGT 91 (251)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 194
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.65 E-value=0.019 Score=49.75 Aligned_cols=107 Identities=15% Similarity=0.193 Sum_probs=69.7
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID 218 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~ 218 (339)
+....+..+.++||-+|+| +|..++.+++.++ ..+|+.++.+++..+.+++ .|...-+.... .+..+.+.+
T Consensus 60 L~~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~ 135 (234)
T PLN02781 60 LSMLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQ 135 (234)
T ss_pred HHHHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHH
Confidence 3344566778899999975 4777777777763 3399999999988777754 45332222222 344555544
Q ss_pred hc----CCCccEEE-EcC--CCHHHHHHHHHHhhcCCcEEEEec
Q 019535 219 MT----DGGADYCF-ECV--GLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 219 ~~----~g~~d~v~-d~~--g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+. .+.||+|| |+. .-...++.+++.++++ |.++.-.
T Consensus 136 l~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn 178 (234)
T PLN02781 136 LLNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN 178 (234)
T ss_pred HHhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence 42 23799998 443 2244578889999997 8776543
No 195
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.65 E-value=0.015 Score=51.76 Aligned_cols=128 Identities=21% Similarity=0.278 Sum_probs=73.7
Q ss_pred cceEEcCCCCCccccccccchhhhhhHHHHHh-cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH
Q 019535 116 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 194 (339)
Q Consensus 116 ~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~-~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~ 194 (339)
...+++.+.+-+. ......|++. +.-+ .-++++.+||-+|+|. |.+++.. ..+|+++|++++.++-..+.++
T Consensus 130 ~~~i~lDPGlAFG----TG~HpTT~lc-L~~Le~~~~~g~~vlDvGcGS-GILaIAa-~kLGA~~v~g~DiDp~AV~aa~ 202 (300)
T COG2264 130 ELNIELDPGLAFG----TGTHPTTSLC-LEALEKLLKKGKTVLDVGCGS-GILAIAA-AKLGAKKVVGVDIDPQAVEAAR 202 (300)
T ss_pred ceEEEEccccccC----CCCChhHHHH-HHHHHHhhcCCCEEEEecCCh-hHHHHHH-HHcCCceEEEecCCHHHHHHHH
Confidence 4556666655432 2333344443 2222 1256899999999753 5544433 3458879999999987666554
Q ss_pred h----cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH---HHHHHHHHHhhcCCcEEEEeccC
Q 019535 195 R----FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 195 ~----~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
. .+......... ... .....++.+|+|+-.+=.. ...+.....++++ |++++.|..
T Consensus 203 eNa~~N~v~~~~~~~~---~~~---~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl 265 (300)
T COG2264 203 ENARLNGVELLVQAKG---FLL---LEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL 265 (300)
T ss_pred HHHHHcCCchhhhccc---ccc---hhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence 3 34332111110 111 1112224899999655322 2366778899997 999999976
No 196
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.033 Score=48.96 Aligned_cols=79 Identities=22% Similarity=0.289 Sum_probs=52.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eE--EeCCCCCCccHHHHHHHhc--CCCc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGA 224 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~ 224 (339)
.+.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++.. .+ .|..+ .+++.+.+.... -+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999987 8999999999999999 999999987765544 344421 12 33333 122333333221 1378
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|++|++.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998874
No 197
>PLN02366 spermidine synthase
Probab=96.64 E-value=0.017 Score=52.11 Aligned_cols=101 Identities=17% Similarity=0.173 Sum_probs=65.5
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CC------ceEEeCCCCCCccHHHHHHHhcCCC
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV------TEFVNSKNCGDKSVSQIIIDMTDGG 223 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga------~~vi~~~~~~~~~~~~~l~~~~~g~ 223 (339)
...++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.++++ .. +.-+.... .+..+.+++..++.
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~---~Da~~~l~~~~~~~ 165 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI---GDGVEFLKNAPEGT 165 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE---ChHHHHHhhccCCC
Confidence 5578999998765 66677778776666899999998877777663 11 10011111 34444454433348
Q ss_pred ccEEE-EcCC---------CHHHHHHHHHHhhcCCcEEEEecc
Q 019535 224 ADYCF-ECVG---------LASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 224 ~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+|+|| |+.. +...++.+.++|+++ |.++.-+.
T Consensus 166 yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~~ 207 (308)
T PLN02366 166 YDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQAE 207 (308)
T ss_pred CCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECcC
Confidence 99998 4432 123477889999998 99876543
No 198
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.044 Score=47.49 Aligned_cols=79 Identities=20% Similarity=0.228 Sum_probs=50.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-- 221 (339)
.+.++||+|+ |.+|..++..+...|+ +|+++++++++.+.+ ++.+.. .+ .|..+ .+.+.+.+.+...
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAAL 82 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 9999999999999999 899998887755433 223322 22 23333 1222222222211
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|.++|.
T Consensus 83 ~~id~vi~~ag~ 94 (250)
T PRK12939 83 GGLDGLVNNAGI 94 (250)
T ss_pred CCCCEEEECCCC
Confidence 379999999875
No 199
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.62 E-value=0.045 Score=44.49 Aligned_cols=88 Identities=24% Similarity=0.229 Sum_probs=59.5
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 234 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~ 234 (339)
+|.++|.|.+|...++-+...|+ +|++.++++++.+.+.+.|+.. . .+..+.+.. .|+||-|+...
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~-~-------~s~~e~~~~-----~dvvi~~v~~~ 68 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEV-A-------DSPAEAAEQ-----ADVVILCVPDD 68 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEE-E-------SSHHHHHHH-----BSEEEE-SSSH
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhh-h-------hhhhhHhhc-----ccceEeecccc
Confidence 68899999999999999999999 9999999999998888777432 2 233333333 58999999886
Q ss_pred HHHHHHHH------HhhcCCcEEEEeccC
Q 019535 235 SLVQEAYA------CCRKGWGKTIVLGVD 257 (339)
Q Consensus 235 ~~~~~~~~------~l~~~~G~~v~~g~~ 257 (339)
...+..+. .+.++ ..++.++..
T Consensus 69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT~ 96 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPG-KIIIDMSTI 96 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TT-EEEEE-SS-
T ss_pred hhhhhhhhhhHHhhccccc-eEEEecCCc
Confidence 65655544 34454 566666543
No 200
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.62 E-value=0.02 Score=49.25 Aligned_cols=104 Identities=21% Similarity=0.264 Sum_probs=75.3
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID 218 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~ 218 (339)
+...+++.+|.+|+-.|.|+ |.+++-||++.|. .+|+..+..++..+.+++ +|....+.... .|..+
T Consensus 86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~Dv~~---- 157 (256)
T COG2519 86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GDVRE---- 157 (256)
T ss_pred HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---ccccc----
Confidence 44568899999999998874 8889999998875 589999998888777643 44333222222 33322
Q ss_pred hcCC-CccEEE-EcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 219 MTDG-GADYCF-ECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 219 ~~~g-~~d~v~-d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
...+ .+|.+| |.-.-...++.+.+.|.++ |.++.+..
T Consensus 158 ~~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 158 GIDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred cccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 2223 799997 6655667799999999998 99999854
No 201
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.014 Score=50.99 Aligned_cols=79 Identities=16% Similarity=0.263 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cC-CceEE--eCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FG-VTEFV--NSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~g-a~~vi--~~~~~~~~~~~~~l~~~~--~ 221 (339)
.+.++||.|+ |.+|..+++.+...|+ +|+++.+++++.+.+.. .+ ...++ |..+ .+++.+.+.+.. .
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD--YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHhc
Confidence 4689999987 9999999999999999 89999998877655432 12 11222 3222 223333333321 2
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 378999998873
No 202
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.61 E-value=0.0052 Score=54.44 Aligned_cols=100 Identities=19% Similarity=0.306 Sum_probs=63.6
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQII 216 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l 216 (339)
+.+.+++++|++||-+|+| -|..+..+|+..|+ +|+++..+++..+++++ .|.. .+.. .++.
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~------~D~~--- 122 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL------QDYR--- 122 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE------S-GG---
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE------eecc---
Confidence 5677899999999999987 47778888888899 99999999998887753 4521 2221 1221
Q ss_pred HHhcCCCccEEEE-----cCCC---HHHHHHHHHHhhcCCcEEEEeccC
Q 019535 217 IDMTDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 217 ~~~~~g~~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
++ .+.||.|+. .+|. +..++.+.+.|+|+ |++++-...
T Consensus 123 -~~-~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i~ 168 (273)
T PF02353_consen 123 -DL-PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTIT 168 (273)
T ss_dssp -G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEEE
T ss_pred -cc-CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEecc
Confidence 11 127899864 4443 34588999999998 999876543
No 203
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.068 Score=48.96 Aligned_cols=79 Identities=19% Similarity=0.141 Sum_probs=52.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce---EEeCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE---FVNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~---vi~~~~~~~~~~~~~l~~~~--~ 221 (339)
.+.+++|.|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.|... ..|..+ .+.+.+.+.... -
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence 4578999987 8999999999989999 899999987765543 2345332 234333 122222222221 1
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|+++|.
T Consensus 84 g~iD~lInnAg~ 95 (334)
T PRK07109 84 GPIDTWVNNAMV 95 (334)
T ss_pred CCCCEEEECCCc
Confidence 379999998874
No 204
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.041 Score=47.75 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=61.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC-
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~- 221 (339)
.+.++||.|+ |.+|...++.+...|+ +|+++.++.+ +.+.+ +..+.. .. .|..+ .+++.+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 3578999987 8999999998888999 8888887643 22222 222322 12 23333 2223333333222
Q ss_pred -CCccEEEEcCCCH-------------------HHHHHHHHHhhcCCcEEEEecc
Q 019535 222 -GGADYCFECVGLA-------------------SLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 222 -g~~d~v~d~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+++|+++.+.+.. ..++.+.+.+... |+++.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 3689999877542 2345555555665 88888865
No 205
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.59 E-value=0.012 Score=56.76 Aligned_cols=73 Identities=23% Similarity=0.254 Sum_probs=53.6
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535 150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 229 (339)
Q Consensus 150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d 229 (339)
+.++++|+|+|.|..|++++++++..|+ +|++.+..+.+.+.++++|+.. +.... ..+.+. .+|+|+.
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~-----~~~~l~-----~~D~VV~ 76 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD-----AVQQIA-----DYALVVT 76 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc-----hHhHhh-----cCCEEEE
Confidence 5578899999999999999999999999 8999997766666677777643 22111 112221 3799998
Q ss_pred cCCCH
Q 019535 230 CVGLA 234 (339)
Q Consensus 230 ~~g~~ 234 (339)
+.|-+
T Consensus 77 SpGi~ 81 (488)
T PRK03369 77 SPGFR 81 (488)
T ss_pred CCCCC
Confidence 88764
No 206
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.59 E-value=0.027 Score=41.98 Aligned_cols=89 Identities=21% Similarity=0.296 Sum_probs=59.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 231 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~ 231 (339)
.+.+|||+|+|.+|..-++.+...|+ +|++++... +..+ +..... .+ .+. +. -.++++||-+.
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~~-----~~~----~~-l~~~~lV~~at 68 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-RR-----EFE----ED-LDGADLVFAAT 68 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-ES-----S-G----GG-CTTESEEEE-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-hh-----hHH----HH-HhhheEEEecC
Confidence 47899999999999999999999999 999998765 2222 211222 11 221 11 12689999999
Q ss_pred CCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 232 GLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 232 g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
+.+..-+...+..+.. |.++.....+
T Consensus 69 ~d~~~n~~i~~~a~~~-~i~vn~~D~p 94 (103)
T PF13241_consen 69 DDPELNEAIYADARAR-GILVNVVDDP 94 (103)
T ss_dssp S-HHHHHHHHHHHHHT-TSEEEETT-C
T ss_pred CCHHHHHHHHHHHhhC-CEEEEECCCc
Confidence 9988666777777765 8888886643
No 207
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.021 Score=49.46 Aligned_cols=77 Identities=19% Similarity=0.306 Sum_probs=52.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCce-EEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCF 228 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~-vi~~~~~~~~~~~~~l~~~~~g~~d~v~ 228 (339)
.+.+++|.|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ .+... ..|..+ .+..+.+.+. .+++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~-~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA-AGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH-hCCCCEEE
Confidence 4578999987 8999999999999999 89999988777655533 34432 234333 2222222222 23799999
Q ss_pred EcCCC
Q 019535 229 ECVGL 233 (339)
Q Consensus 229 d~~g~ 233 (339)
++.|.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 98874
No 208
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=96.56 E-value=0.0061 Score=51.56 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=68.2
Q ss_pred hcCCCCCCEEEEEccCHHHHHHHHHHHHcC--CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhc
Q 019535 147 TANVEVGSTVVIFGLGSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT 220 (339)
Q Consensus 147 ~~~~~~~~~VLI~G~G~iG~~a~~la~~~G--~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~ 220 (339)
..+.....+||-+|++ +|..++.+|+.+. . +|+.++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 40 l~~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~---gda~~~l~~l~ 114 (205)
T PF01596_consen 40 LVRLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIE---GDALEVLPELA 114 (205)
T ss_dssp HHHHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE---S-HHHHHHHHH
T ss_pred HHHhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE---eccHhhHHHHH
Confidence 3445567899999975 4888999998874 4 99999999998877754 45322122222 34555555543
Q ss_pred C----CCccEEE-EcCCC--HHHHHHHHHHhhcCCcEEEEec
Q 019535 221 D----GGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 221 ~----g~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g 255 (339)
. +.||.|| |+.-. ...++.++++++++ |.++.=.
T Consensus 115 ~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN 155 (205)
T PF01596_consen 115 NDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN 155 (205)
T ss_dssp HTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred hccCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence 2 3699998 76643 23377889999996 7666544
No 209
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.55 E-value=0.015 Score=51.32 Aligned_cols=99 Identities=17% Similarity=0.159 Sum_probs=72.2
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC-
Q 019535 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV- 231 (339)
Q Consensus 153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~- 231 (339)
..+|.|+|+|.+|.-++.+|.-+|+ +|...+.+.+|+..+..+-..++-.... .+.++.+.+. ++|++|.++
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~s-t~~~iee~v~-----~aDlvIgaVL 240 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYS-TPSNIEEAVK-----KADLVIGAVL 240 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEc-CHHHHHHHhh-----hccEEEEEEE
Confidence 4578899999999999999999999 9999999999998887643333221111 1244444443 479998755
Q ss_pred -CC----HHHHHHHHHHhhcCCcEEEEeccCCC
Q 019535 232 -GL----ASLVQEAYACCRKGWGKTIVLGVDQP 259 (339)
Q Consensus 232 -g~----~~~~~~~~~~l~~~~G~~v~~g~~~~ 259 (339)
++ ....++.++.|.++ +.+|++....+
T Consensus 241 IpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 241 IPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred ecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 22 23477889999998 99999987654
No 210
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.55 E-value=0.066 Score=44.95 Aligned_cols=104 Identities=20% Similarity=0.342 Sum_probs=64.8
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIII 217 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l~ 217 (339)
+...+++.++++||-+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++. .+..+.+.
T Consensus 32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~------~d~~~~~~ 104 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE------GSAPECLA 104 (196)
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE------CchHHHHh
Confidence 44556778889999998753 5566666665532399999999988777653 45432 222 22222222
Q ss_pred HhcCCCccEE-EEcCCC-HHHHHHHHHHhhcCCcEEEEecc
Q 019535 218 DMTDGGADYC-FECVGL-ASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 218 ~~~~g~~d~v-~d~~g~-~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
.+. ..+|.+ ++.... ...++.+.+.|+++ |+++....
T Consensus 105 ~~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 105 QLA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred hCC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 221 234554 443322 35588999999997 99888753
No 211
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.54 E-value=0.0098 Score=48.70 Aligned_cols=105 Identities=19% Similarity=0.167 Sum_probs=67.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeC-CCCC-------------CccHHHHHH
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS-KNCG-------------DKSVSQIII 217 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~-~~~~-------------~~~~~~~l~ 217 (339)
++.+|+|+|+|.+|+.|+++++.+|+ +++..+..+++.+..+..++..+... .+.. +......+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 34789999999999999999999999 89999999988888888776544331 1100 011222222
Q ss_pred HhcCCCccEEEEcC--CC---H-HHHHHHHHHhhcCCcEEEEeccCCC
Q 019535 218 DMTDGGADYCFECV--GL---A-SLVQEAYACCRKGWGKTIVLGVDQP 259 (339)
Q Consensus 218 ~~~~g~~d~v~d~~--g~---~-~~~~~~~~~l~~~~G~~v~~g~~~~ 259 (339)
+... .+|++|.+. .+ + ...++.++.|.++ ..+++++...+
T Consensus 98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~g 143 (168)
T PF01262_consen 98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQG 143 (168)
T ss_dssp HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGGT
T ss_pred HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecCC
Confidence 2211 378888532 12 1 2256778888886 88888876543
No 212
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.016 Score=50.73 Aligned_cols=79 Identities=24% Similarity=0.309 Sum_probs=52.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eEEeCCCCCCccHHHHHHHhc--CCCccE
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGGADY 226 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~vi~~~~~~~~~~~~~l~~~~--~g~~d~ 226 (339)
.+++|||+|+ |.+|...++.+...|+ +|+.+++++.+.+.. ..++.. ...|..+ .+.+.+.+.+.. .+++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4689999987 9999999999999999 899999887765544 334432 2234433 122222333221 137899
Q ss_pred EEEcCCC
Q 019535 227 CFECVGL 233 (339)
Q Consensus 227 v~d~~g~ 233 (339)
+|.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998863
No 213
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.52 E-value=0.025 Score=51.20 Aligned_cols=91 Identities=25% Similarity=0.416 Sum_probs=61.6
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535 154 STVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 232 (339)
Q Consensus 154 ~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g 232 (339)
.+|.|+|+|.+|...++.++..|. .+|+++++++++.+.+++.|...... .+..+.+ ...|+||.|++
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh-----cCCCEEEECCC
Confidence 579999999999999998888884 37999999988888888777532111 1222212 25899999998
Q ss_pred CHHH---HHHHHHHhhcCCcEEEEecc
Q 019535 233 LASL---VQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 233 ~~~~---~~~~~~~l~~~~G~~v~~g~ 256 (339)
.... ++.....++++ ..++.+|.
T Consensus 76 ~~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 7542 23333455664 56666654
No 214
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.49 E-value=0.037 Score=46.81 Aligned_cols=35 Identities=31% Similarity=0.322 Sum_probs=31.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~ 186 (339)
...+|+|+|+|++|..+++.+...|..++..++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999999999999999999889998876
No 215
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.053 Score=47.50 Aligned_cols=77 Identities=19% Similarity=0.235 Sum_probs=51.6
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cC-C-c--eEEeCCCCCCccHHHHHHHhc---CCCc
Q 019535 154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG-V-T--EFVNSKNCGDKSVSQIIIDMT---DGGA 224 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~g-a-~--~vi~~~~~~~~~~~~~l~~~~---~g~~ 224 (339)
.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.. .+ . . ...|..+ ...+.+.+.... .+++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 47899987 8999999998888999 89999988877665533 22 1 1 1234443 122333333321 3479
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|+++.++|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999998875
No 216
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.017 Score=50.65 Aligned_cols=83 Identities=23% Similarity=0.258 Sum_probs=53.9
Q ss_pred CCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc----eEEeCCCCCCccHHHHHHHhc--
Q 019535 149 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT----EFVNSKNCGDKSVSQIIIDMT-- 220 (339)
Q Consensus 149 ~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~----~vi~~~~~~~~~~~~~l~~~~-- 220 (339)
+.-++.++||.|+ |.+|..+++.+...|+ +|+.+.++++..+.+.+ .... ...|..+ .+.+.+.+.+..
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 83 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVER 83 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHHH
Confidence 3446789999987 9999999999999999 89999988776655433 2211 2233333 122222222221
Q ss_pred CCCccEEEEcCCCH
Q 019535 221 DGGADYCFECVGLA 234 (339)
Q Consensus 221 ~g~~d~v~d~~g~~ 234 (339)
-+++|+||.+.|..
T Consensus 84 ~~~~d~vi~~ag~~ 97 (264)
T PRK12829 84 FGGLDVLVNNAGIA 97 (264)
T ss_pred hCCCCEEEECCCCC
Confidence 13799999988753
No 217
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.44 E-value=0.033 Score=49.73 Aligned_cols=43 Identities=28% Similarity=0.234 Sum_probs=37.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 194 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~ 194 (339)
.+.+|+|+|+|++|++++..+...|+++|++++++.++.+.+.
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 4678999999999999999999999989999999988766653
No 218
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.44 E-value=0.015 Score=48.91 Aligned_cols=101 Identities=16% Similarity=0.253 Sum_probs=63.9
Q ss_pred HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCceEEeCCCCCCccHHHHHHHhc
Q 019535 145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMT 220 (339)
Q Consensus 145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~~vi~~~~~~~~~~~~~l~~~~ 220 (339)
.+.....++.+||.+|+|. |..+..+++. |. +|++++.+++..+.+++. +...+ +... .++.+. .+
T Consensus 23 ~~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~~~~--~~- 92 (197)
T PRK11207 23 LEAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDLNNL--TF- 92 (197)
T ss_pred HHhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cChhhC--Cc-
Confidence 3444556778999999874 7777788765 77 999999999877776542 22211 1111 122110 11
Q ss_pred CCCccEEEEcCC----C----HHHHHHHHHHhhcCCcEEEEecc
Q 019535 221 DGGADYCFECVG----L----ASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 221 ~g~~d~v~d~~g----~----~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
.+.||+|+.... . ...++.+.+.|+++ |.++.+..
T Consensus 93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~~ 135 (197)
T PRK11207 93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVAA 135 (197)
T ss_pred CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEEE
Confidence 237999986432 1 24477888899998 99665543
No 219
>PRK01581 speE spermidine synthase; Validated
Probab=96.41 E-value=0.064 Score=49.12 Aligned_cols=100 Identities=15% Similarity=0.113 Sum_probs=65.9
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC-----------CceEEeCCCCCCccHHHHHHH
Q 019535 150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-----------VTEFVNSKNCGDKSVSQIIID 218 (339)
Q Consensus 150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g-----------a~~vi~~~~~~~~~~~~~l~~ 218 (339)
.....+|||+|+| .|.++..+++..+.++|++++.+++-.+.++++. ..++ ...- .+..+.+.+
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV-~vvi---~Da~~fL~~ 222 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRV-NVHV---CDAKEFLSS 222 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCce-EEEE---CcHHHHHHh
Confidence 3456799999976 4667777777666669999999999898888521 1111 1111 344444443
Q ss_pred hcCCCccEEE-EcCCC----------HHHHHHHHHHhhcCCcEEEEecc
Q 019535 219 MTDGGADYCF-ECVGL----------ASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 219 ~~~g~~d~v~-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
..+.||+|| |.... ...++.+.+.|+++ |.++.-..
T Consensus 223 -~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 223 -PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred -cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 334899998 53221 22477889999998 99887753
No 220
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.41 E-value=0.084 Score=44.53 Aligned_cols=81 Identities=26% Similarity=0.348 Sum_probs=56.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
.+.+++|+|.|.+|..+++.+...|+ +|+++++++++.+.+++ +|+. .++..+ +.....|+++-|
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~------------l~~~~~Dv~vp~ 92 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE------------IYSVDADVFAPC 92 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh------------hccccCCEEEec
Confidence 56789999999999999999999999 89999988887766644 4643 333221 111158899876
Q ss_pred CCCHHHHHHHHHHhhc
Q 019535 231 VGLASLVQEAYACCRK 246 (339)
Q Consensus 231 ~g~~~~~~~~~~~l~~ 246 (339)
..........++.+..
T Consensus 93 A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 93 ALGGVINDDTIPQLKA 108 (200)
T ss_pred ccccccCHHHHHHcCC
Confidence 6554445555566654
No 221
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.022 Score=51.22 Aligned_cols=79 Identities=20% Similarity=0.263 Sum_probs=53.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCC--c-eE--EeCCCCCCccHHHHHHHhc--CC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV--T-EF--VNSKNCGDKSVSQIIIDMT--DG 222 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga--~-~v--i~~~~~~~~~~~~~l~~~~--~g 222 (339)
.++++||.|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++++. . .. .|..+ .+.+.+.+.+.. .+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 4679999987 8999999999999999 899999988776554 33442 1 11 34433 122323333322 14
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
++|++|+++|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 222
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.057 Score=46.38 Aligned_cols=79 Identities=18% Similarity=0.156 Sum_probs=49.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHH-H---HhcCCce-EEeCCCCCCccHHHHHHHhcC--CC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-G---KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GG 223 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~-~---~~~ga~~-vi~~~~~~~~~~~~~l~~~~~--g~ 223 (339)
++.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+. + +..+... ..|..+ .+++.+.+.+... ++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 3679999987 9999999998888899 89999987655322 2 2223322 133332 1222222222221 37
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|++|++.+.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 8999998763
No 223
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.36 E-value=0.17 Score=36.81 Aligned_cols=85 Identities=26% Similarity=0.289 Sum_probs=55.0
Q ss_pred EEEEEccCHHHHHHHHHHHHcC---CCEEEEE-cCChhHHHHH-HhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535 155 TVVIFGLGSIGLAVAEGARLCG---ATRIIGV-DVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 229 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G---~~~Vi~~-~~~~~~~~~~-~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d 229 (339)
+|.|+|+|.+|.+.++-....| . +|+.+ .+++++.+.+ ++++.. +.. .+..+.+++ .|+||-
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~-~~~------~~~~~~~~~-----advvil 67 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQ-ATA------DDNEEAAQE-----ADVVIL 67 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTE-EES------EEHHHHHHH-----TSEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccc-ccc------CChHHhhcc-----CCEEEE
Confidence 5778899999999999988888 6 78844 8999888776 446643 221 133444443 699999
Q ss_pred cCCCHHHHHHHHHH---hhcCCcEEEEe
Q 019535 230 CVGLASLVQEAYAC---CRKGWGKTIVL 254 (339)
Q Consensus 230 ~~g~~~~~~~~~~~---l~~~~G~~v~~ 254 (339)
|+.... +...++. ..++ ..++.+
T Consensus 68 av~p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 68 AVKPQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp -S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred EECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence 998766 4434333 4443 455444
No 224
>PRK04457 spermidine synthase; Provisional
Probab=96.34 E-value=0.057 Score=47.61 Aligned_cols=95 Identities=13% Similarity=0.148 Sum_probs=66.3
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CC----c--eEEeCCCCCCccHHHHHHHhcCCC
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV----T--EFVNSKNCGDKSVSQIIIDMTDGG 223 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga----~--~vi~~~~~~~~~~~~~l~~~~~g~ 223 (339)
..+++||++|+|. |..+..+++.....++++++.+++-.+.+++. +. . .++. .+..+.+... .+.
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-RHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-CCC
Confidence 4567899999874 77888888877544899999999998888763 31 1 2222 3444444432 347
Q ss_pred ccEEE-EcCCC---------HHHHHHHHHHhhcCCcEEEEe
Q 019535 224 ADYCF-ECVGL---------ASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 224 ~d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 254 (339)
+|+|| |.... ...++.+.+.|+++ |.++.-
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 99997 54322 35588999999998 998773
No 225
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=96.34 E-value=0.041 Score=47.91 Aligned_cols=103 Identities=16% Similarity=0.217 Sum_probs=69.5
Q ss_pred HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC--CCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHH
Q 019535 145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID 218 (339)
Q Consensus 145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G--~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~ 218 (339)
....+....++||-+|.+ +|..++.+|+.++ . +++.++.+++..+.+++ .|...-++... .+..+.+.+
T Consensus 72 ~~l~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~~ 146 (247)
T PLN02589 72 NMLLKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLDQ 146 (247)
T ss_pred HHHHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHHH
Confidence 334455567899999974 5888888888773 4 89999999988777644 46333233333 455565655
Q ss_pred hc-----CCCccEEE-EcCCC--HHHHHHHHHHhhcCCcEEEE
Q 019535 219 MT-----DGGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIV 253 (339)
Q Consensus 219 ~~-----~g~~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~ 253 (339)
+. .+.||+|| |+--. ...++.++++++++ |.++.
T Consensus 147 l~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 147 MIEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred HHhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 43 24899998 65532 34478889999997 77654
No 226
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.033 Score=47.60 Aligned_cols=77 Identities=19% Similarity=0.237 Sum_probs=52.5
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535 154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 231 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~ 231 (339)
.+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+.. ...|..+ .+.+.+.+.+...+++|++|.+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhcCCCCCEEEECC
Confidence 46899986 8999999988888899 899999988877777665543 2334443 12233322233223799999987
Q ss_pred CC
Q 019535 232 GL 233 (339)
Q Consensus 232 g~ 233 (339)
|.
T Consensus 79 g~ 80 (222)
T PRK06953 79 GV 80 (222)
T ss_pred Cc
Confidence 64
No 227
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.31 E-value=0.072 Score=45.86 Aligned_cols=92 Identities=23% Similarity=0.237 Sum_probs=60.3
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCC--EEEEEcCC----hhH--------HHHHHhcCCceEEeCCCCCCccHHHHH
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGAT--RIIGVDVI----SEK--------FEIGKRFGVTEFVNSKNCGDKSVSQII 216 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~--~Vi~~~~~----~~~--------~~~~~~~ga~~vi~~~~~~~~~~~~~l 216 (339)
-.+.+++|+|+|..|..++..+...|++ +++.++++ .++ .++++.++... . + .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence 3568999999999999999999999997 89999987 343 22334433211 0 1 1333333
Q ss_pred HHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 217 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 217 ~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
. .+|++|++++.....+..++.+.++ ..+..+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 2 3899999997433234667777775 6555544
No 228
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.023 Score=49.63 Aligned_cols=79 Identities=23% Similarity=0.275 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc----eEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT----EFVNSKNCGDKSVSQIIIDMTD--GGA 224 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~----~vi~~~~~~~~~~~~~l~~~~~--g~~ 224 (339)
.+.++||.|+ |.+|...++.+...|+ +|+.++++++..+...++... ...|..+ .+.+.+.+.+... +++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD--SQSVEAAVAAVISAFGRI 90 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999987 8999999998888999 899999887655544443211 1233332 1223232322221 378
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|++|.++|.
T Consensus 91 d~vi~~ag~ 99 (255)
T PRK06841 91 DILVNSAGV 99 (255)
T ss_pred CEEEECCCC
Confidence 999998874
No 229
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.30 E-value=0.061 Score=51.39 Aligned_cols=78 Identities=26% Similarity=0.394 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh--hHHHH-HHhcCCc-eEEeCCCCCCccHHHHHHH-hc--CCC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFEI-GKRFGVT-EFVNSKNCGDKSVSQIIID-MT--DGG 223 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~--~~~~~-~~~~ga~-~vi~~~~~~~~~~~~~l~~-~~--~g~ 223 (339)
++.++||.|+ |.+|...++.+...|+ +|+.+++++ ++.+. .++++.. ..+|..+ .+-.+.+.+ .. .++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~---~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA---PDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHHHHHhCCC
Confidence 4688999987 9999999999999999 888887643 22222 2345543 2345444 332333322 21 137
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|++|++.|.
T Consensus 285 id~vi~~AG~ 294 (450)
T PRK08261 285 LDIVVHNAGI 294 (450)
T ss_pred CCEEEECCCc
Confidence 9999999883
No 230
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=96.30 E-value=0.011 Score=51.31 Aligned_cols=106 Identities=18% Similarity=0.259 Sum_probs=67.6
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCc-eE-EeCCCCCCccHHH-H
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT-EF-VNSKNCGDKSVSQ-I 215 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~-~v-i~~~~~~~~~~~~-~ 215 (339)
+...+++.+|++|+-.|.|. |.++..+++..|. .+|+..+.++++.+.+++ .|.. .+ +...+ +.+ .
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D-----v~~~g 105 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD-----VCEEG 105 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES------GGCG-
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc-----eeccc
Confidence 55678999999999998764 7788888888763 389999999988877743 4543 22 22222 211 1
Q ss_pred HHHhcCCCccEEE-EcCCCHHHHHHHHHHh-hcCCcEEEEecc
Q 019535 216 IIDMTDGGADYCF-ECVGLASLVQEAYACC-RKGWGKTIVLGV 256 (339)
Q Consensus 216 l~~~~~g~~d~v~-d~~g~~~~~~~~~~~l-~~~~G~~v~~g~ 256 (339)
..+-....+|.|| |--.-...+..+.+.| +++ |+++.+..
T Consensus 106 ~~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 106 FDEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp -STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred ccccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 1111123689997 6555555699999999 887 99988853
No 231
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.031 Score=50.20 Aligned_cols=78 Identities=22% Similarity=0.298 Sum_probs=51.0
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eE--EeCCCCCCccHHHHHHHhc--CC
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMT--DG 222 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g 222 (339)
+.++||.|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ .+.. .. .|..+ .+.+.+.+.+.. .+
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD--LDAVDALVADVEKRIG 116 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence 578999987 8999999998888999 99999998876554422 2322 22 23322 122323333221 23
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
.+|++|+++|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 232
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.028 Score=49.63 Aligned_cols=78 Identities=24% Similarity=0.272 Sum_probs=52.0
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcC-Cc-eEEeCCCCCCccHHHHHHHhcC--CCccE
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG-VT-EFVNSKNCGDKSVSQIIIDMTD--GGADY 226 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~g-a~-~vi~~~~~~~~~~~~~l~~~~~--g~~d~ 226 (339)
+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ +.++ .. ...|..+ .+.+.+.+..... +++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 568999987 8999999998888999 899999888776554 3344 22 1234333 2233333333221 47999
Q ss_pred EEEcCCC
Q 019535 227 CFECVGL 233 (339)
Q Consensus 227 v~d~~g~ 233 (339)
+|++.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9998874
No 233
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.037 Score=48.57 Aligned_cols=81 Identities=23% Similarity=0.322 Sum_probs=52.1
Q ss_pred CCCCCEEEEEcc-C-HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----cCCceE----EeCCCCCCccHHHHHHH
Q 019535 150 VEVGSTVVIFGL-G-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTEF----VNSKNCGDKSVSQIIID 218 (339)
Q Consensus 150 ~~~~~~VLI~G~-G-~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----~ga~~v----i~~~~~~~~~~~~~l~~ 218 (339)
+..++++||.|+ | ++|.++++.+...|+ +|+++++++++.+...+ ++...+ .|..+ .+.+.+.+.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~ 90 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA 90 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence 345789999986 6 799999999999999 89998887766544322 343222 23333 1222222222
Q ss_pred hc--CCCccEEEEcCCC
Q 019535 219 MT--DGGADYCFECVGL 233 (339)
Q Consensus 219 ~~--~g~~d~v~d~~g~ 233 (339)
.. .+++|++|++.|.
T Consensus 91 ~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 91 AVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 21 1478999999984
No 234
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.28 E-value=0.049 Score=50.97 Aligned_cols=91 Identities=23% Similarity=0.308 Sum_probs=60.1
Q ss_pred EEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHh--cC--Cc-eEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535 156 VVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR--FG--VT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 229 (339)
Q Consensus 156 VLI~G~G~iG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~--~g--a~-~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d 229 (339)
|+|+|+|.+|..+++.+...+-. +|++.+++.++.+.+.+ .+ .. ..+|..+ .+.+.++.. +.|+|++
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~------~~~l~~~~~-~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND------PESLAELLR-GCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT------HHHHHHHHT-TSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC------HHHHHHHHh-cCCEEEE
Confidence 68999999999999998877643 79999999998777653 22 11 2344333 223455433 4699999
Q ss_pred cCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 230 CVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 230 ~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
|+|.......+..|+..+ -.+++.
T Consensus 74 ~~gp~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT--EEEES
T ss_pred CCccchhHHHHHHHHHhC-CCeecc
Confidence 999876566777777776 777774
No 235
>PRK09186 flagellin modification protein A; Provisional
Probab=96.27 E-value=0.074 Score=46.33 Aligned_cols=78 Identities=21% Similarity=0.320 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hhc----CCc---e-EEeCCCCCCccHHHHHHHhcC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF----GVT---E-FVNSKNCGDKSVSQIIIDMTD 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~----ga~---~-vi~~~~~~~~~~~~~l~~~~~ 221 (339)
.+.++||.|+ |.+|...+..+...|+ +|+.+.+++++.+.+ +++ +.. . ..|..+ .+.+.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 4678999987 8999999999999999 899999887765543 222 221 1 224333 2233333333222
Q ss_pred --CCccEEEEcCC
Q 019535 222 --GGADYCFECVG 232 (339)
Q Consensus 222 --g~~d~v~d~~g 232 (339)
+++|++|++.+
T Consensus 80 ~~~~id~vi~~A~ 92 (256)
T PRK09186 80 KYGKIDGAVNCAY 92 (256)
T ss_pred HcCCccEEEECCc
Confidence 36899999875
No 236
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.27 E-value=0.029 Score=49.29 Aligned_cols=79 Identities=22% Similarity=0.220 Sum_probs=52.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-eE--EeCCCCCCccHHHHHHHhc--CCCc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGA 224 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~ 224 (339)
++.++||.|+ +.+|...++.+...|+ +|+.+++++++.+.+.+ ++.. .+ .|..+ ..++.+.+.+.. .+.+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS--YADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHhcCCC
Confidence 4678999987 8999999999999999 89999998877666543 3321 12 23333 122333333322 2379
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|++|+++|.
T Consensus 82 d~li~~ag~ 90 (263)
T PRK06200 82 DCFVGNAGI 90 (263)
T ss_pred CEEEECCCC
Confidence 999998873
No 237
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.076 Score=46.92 Aligned_cols=76 Identities=20% Similarity=0.280 Sum_probs=48.7
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc----eEEeCCCCCCccHHHHHHHhc--CCC
Q 019535 155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT----EFVNSKNCGDKSVSQIIIDMT--DGG 223 (339)
Q Consensus 155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~----~vi~~~~~~~~~~~~~l~~~~--~g~ 223 (339)
+++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+.. ...|..+ .+.+.+.+.+.. .++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence 6899987 8999999998888999 899988877654433 223332 1244443 122222222221 136
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|++|++.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 238
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.25 E-value=0.028 Score=45.13 Aligned_cols=96 Identities=22% Similarity=0.219 Sum_probs=60.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCce-EEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCF 228 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~-vi~~~~~~~~~~~~~l~~~~~g~~d~v~ 228 (339)
..+.+++|+|+|.+|...++.+...|..+|+++++++++.+.+ +.++... .... .+..+. -+.+|+|+
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~Dvvi 86 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY-----LDLEEL-----LAEADLII 86 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee-----cchhhc-----cccCCEEE
Confidence 4568899999999999999988888643899999888776554 4455321 0111 111111 13689999
Q ss_pred EcCCCHHH----HHHHHHHhhcCCcEEEEeccC
Q 019535 229 ECVGLASL----VQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 229 d~~g~~~~----~~~~~~~l~~~~G~~v~~g~~ 257 (339)
.|++.... .......++++ ..++.++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~ 118 (155)
T cd01065 87 NTTPVGMKPGDELPLPPSLLKPG-GVVYDVVYN 118 (155)
T ss_pred eCcCCCCCCCCCCCCCHHHcCCC-CEEEEcCcC
Confidence 99886541 11222345665 666666543
No 239
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.031 Score=49.12 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eE--EeCCCCCCccHH-HHHHHhc--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVS-QIIIDMT-- 220 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~v--i~~~~~~~~~~~-~~l~~~~-- 220 (339)
.+.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ .+.. .+ .|..+ .+.. +.+.+..
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~ 84 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH---PEATAGLAGQAVEA 84 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC---HHHHHHHHHHHHHH
Confidence 4678999987 8999999999999999 99999998776554422 2321 22 33333 3322 2222221
Q ss_pred CCCccEEEEcCCC
Q 019535 221 DGGADYCFECVGL 233 (339)
Q Consensus 221 ~g~~d~v~d~~g~ 233 (339)
-+++|++|+++|.
T Consensus 85 ~~~id~vi~~Ag~ 97 (263)
T PRK07814 85 FGRLDIVVNNVGG 97 (263)
T ss_pred cCCCCEEEECCCC
Confidence 1379999998873
No 240
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.038 Score=48.22 Aligned_cols=73 Identities=16% Similarity=0.152 Sum_probs=49.8
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-e--EEeCCCCCCccHHHHHHHhcCCCc
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-E--FVNSKNCGDKSVSQIIIDMTDGGA 224 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~--vi~~~~~~~~~~~~~l~~~~~g~~ 224 (339)
+.++||.|+ |.+|..+++.+...|+ +|+++++++++.+.++. .+.. . ..|..+ . +.+.....+++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~---~~~~~~~~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD---A---IDRAQAAEWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC---H---HHHHHHhcCCC
Confidence 457999987 8999999999999999 89999988766554432 2321 1 223333 1 23333333479
Q ss_pred cEEEEcCC
Q 019535 225 DYCFECVG 232 (339)
Q Consensus 225 d~v~d~~g 232 (339)
|++|++.|
T Consensus 75 d~vi~~ag 82 (257)
T PRK09291 75 DVLLNNAG 82 (257)
T ss_pred CEEEECCC
Confidence 99999887
No 241
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.21 E-value=0.049 Score=44.01 Aligned_cols=88 Identities=18% Similarity=0.134 Sum_probs=56.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 231 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~ 231 (339)
.+.+|+|+|+|.+|.--++.+...|+ +|.+++ ++..+.+++++... +..+.+...+ -.++|+||-++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~~~~~d---------l~~a~lViaaT 78 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKTFSNDD---------IKDAHLIYAAT 78 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecccChhc---------CCCceEEEECC
Confidence 57889999999999988888888999 888874 44444444554222 2222211111 12689999999
Q ss_pred CCHHHHHHHHHHhhcCCcEEEEe
Q 019535 232 GLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 232 g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
+... .+.....++.. +.++..
T Consensus 79 ~d~e-~N~~i~~~a~~-~~~vn~ 99 (157)
T PRK06719 79 NQHA-VNMMVKQAAHD-FQWVNV 99 (157)
T ss_pred CCHH-HHHHHHHHHHH-CCcEEE
Confidence 9988 66666656554 434443
No 242
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.19 E-value=0.022 Score=48.16 Aligned_cols=92 Identities=16% Similarity=-0.005 Sum_probs=56.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
.+.+|||+|+|.+|...++.+...|+ +|+++.+... ....+...+... +.... +.+. . -.++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~-~~~~~-----~~~~--~--l~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIR-WKQKE-----FEPS--D--IVDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEE-EEecC-----CChh--h--cCCceEEEEc
Confidence 46799999999999999988888998 8888875432 112221222111 11121 1110 0 1268999999
Q ss_pred CCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 231 VGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 231 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
++.+. .+..+...+.. +.++....
T Consensus 78 T~d~e-lN~~i~~~a~~-~~lvn~~d 101 (202)
T PRK06718 78 TNDPR-VNEQVKEDLPE-NALFNVIT 101 (202)
T ss_pred CCCHH-HHHHHHHHHHh-CCcEEECC
Confidence 99988 55555544454 56665544
No 243
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.19 E-value=0.039 Score=46.70 Aligned_cols=93 Identities=17% Similarity=0.173 Sum_probs=61.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
.+.+|||+|+|.+|..-++.+...|+ +|++++.... ....+.+.|.-..+. .+ +.... + .++++||-+
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~-----~~~~d--l--~~~~lVi~a 76 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RC-----FDADI--L--EGAFLVIAA 76 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CC-----CCHHH--h--CCcEEEEEC
Confidence 46799999999999999999999999 8888876543 233333334222222 22 11111 1 268999999
Q ss_pred CCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 231 VGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 231 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
++.+..-.......... |..+....
T Consensus 77 t~d~~ln~~i~~~a~~~-~ilvn~~d 101 (205)
T TIGR01470 77 TDDEELNRRVAHAARAR-GVPVNVVD 101 (205)
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECC
Confidence 99987555666666665 77776543
No 244
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.18 E-value=0.15 Score=41.19 Aligned_cols=80 Identities=26% Similarity=0.283 Sum_probs=49.0
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC--hhHHHHH----HhcCCc-eEEeCCCCCCccHHHHHHHhc--CCC
Q 019535 154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI--SEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG 223 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~--~~~~~~~----~~~ga~-~vi~~~~~~~~~~~~~l~~~~--~g~ 223 (339)
+++||.|+ +++|...++.+...|..+|+.+.++ .++.+.+ +..+.. .++..+-...+++.+.+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 36899987 8999999988888877688888887 3433332 334432 223222111233333344333 238
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999998876
No 245
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.17 E-value=0.05 Score=47.21 Aligned_cols=78 Identities=23% Similarity=0.318 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-e--EEeCCCCCCccHHHHHHHhcC--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-E--FVNSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~--vi~~~~~~~~~~~~~l~~~~~-- 221 (339)
++.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +..+.. . ..|..+ ...+.+.+.....
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD--EEDVEATFAQIAEDF 80 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 9999999999999999 899999887655443 223432 1 223222 1222232333222
Q ss_pred CCccEEEEcCC
Q 019535 222 GGADYCFECVG 232 (339)
Q Consensus 222 g~~d~v~d~~g 232 (339)
+++|++|+++|
T Consensus 81 ~~id~vi~~ag 91 (253)
T PRK08217 81 GQLNGLINNAG 91 (253)
T ss_pred CCCCEEEECCC
Confidence 36899999887
No 246
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.17 E-value=0.058 Score=48.07 Aligned_cols=43 Identities=23% Similarity=0.220 Sum_probs=37.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 194 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~ 194 (339)
.+.+++|+|+|+.+++++.-+...|+++++++.++.++.+.+.
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 4678999999999999998888899989999999988766653
No 247
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.16 E-value=0.034 Score=48.83 Aligned_cols=78 Identities=17% Similarity=0.178 Sum_probs=51.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-eE--EeCCCCCCccHHHHHHHhcC--CCc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA 224 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~~ 224 (339)
.+++++|.|+ |.+|...++.+...|+ +|+.++++.++.+.+++ .+.. .. .|..+ .....+.+.+... +.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999987 8999999999989999 89999988777666544 2321 11 23332 1223333333222 378
Q ss_pred cEEEEcCC
Q 019535 225 DYCFECVG 232 (339)
Q Consensus 225 d~v~d~~g 232 (339)
|++|++.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999876
No 248
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.16 E-value=0.093 Score=47.61 Aligned_cols=94 Identities=11% Similarity=0.097 Sum_probs=60.7
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEE-eCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535 155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECVG 232 (339)
Q Consensus 155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi-~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g 232 (339)
+|||.|+ |-+|...++.+...|. +|.+++++.++...+...++..+. |..+ . +.+.+... ++|+||++++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~---~~l~~al~-g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL---P---ETLPPSFK-GVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC---H---HHHHHHHC-CCCEEEECCC
Confidence 6999987 9999999999888999 899999887666555555654332 2222 1 22333222 5899999875
Q ss_pred CH------------HHHHHHHHHhhcCCc--EEEEeccC
Q 019535 233 LA------------SLVQEAYACCRKGWG--KTIVLGVD 257 (339)
Q Consensus 233 ~~------------~~~~~~~~~l~~~~G--~~v~~g~~ 257 (339)
.. .....+++.+... | ++|.++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~ 111 (317)
T CHL00194 74 SRPSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSIL 111 (317)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccc
Confidence 31 1123455555553 4 78877753
No 249
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.035 Score=48.46 Aligned_cols=79 Identities=22% Similarity=0.220 Sum_probs=51.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~~~~--~ 221 (339)
.++++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+.. .+.. ...|..+ .+.+.+.+.+.. -
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4678999987 8999999999999999 89999988776554422 2321 1233333 122333333222 1
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|+++++.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 479999998774
No 250
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.03 Score=49.70 Aligned_cols=78 Identities=18% Similarity=0.222 Sum_probs=51.9
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC-Cc-e--EEeCCCCCCccHHHHHHHhcC--CCcc
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-VT-E--FVNSKNCGDKSVSQIIIDMTD--GGAD 225 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g-a~-~--vi~~~~~~~~~~~~~l~~~~~--g~~d 225 (339)
+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+.... .. . ..|..+ .+.+.+.+..... +++|
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCCC
Confidence 567999987 9999999999888999 8999999888776655432 11 1 223333 1222222232221 3689
Q ss_pred EEEEcCCC
Q 019535 226 YCFECVGL 233 (339)
Q Consensus 226 ~v~d~~g~ 233 (339)
+++++.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999875
No 251
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=96.14 E-value=0.073 Score=49.17 Aligned_cols=60 Identities=20% Similarity=0.203 Sum_probs=44.9
Q ss_pred CccccccccchhhhhhHHHHHhcCC-CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535 126 PPNRACLLSCGVSTGVGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE 188 (339)
Q Consensus 126 ~~~~aa~l~~~~~ta~~al~~~~~~-~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~ 188 (339)
...+|....+.+.+- . +.+..+. -.|.+|.|.|-|.+|+.+++.+...|+ +|++++.++.
T Consensus 181 ~r~~aTg~Gv~~~~~-~-a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 181 GRSEATGYGVFYAIR-E-ALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred CCCcccceehHHHHH-H-HHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 345566555544444 2 3344444 489999999999999999999999999 8999987776
No 252
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.13 E-value=0.02 Score=50.98 Aligned_cols=96 Identities=17% Similarity=0.091 Sum_probs=61.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 229 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d 229 (339)
..+.+++|+|+|++|++++..+...|+.+|+++.++.++.+.+.+ ++....+.. . .+..+. -..+|+||+
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~~~-----~~~~DivIn 191 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQEE-----LADFDLIIN 191 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccchhc-----cccCCEEEE
Confidence 356789999999999999999999996699999999887765543 332110111 1 011111 125899999
Q ss_pred cCCCHHH-----HHHHHHHhhcCCcEEEEecc
Q 019535 230 CVGLASL-----VQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 230 ~~g~~~~-----~~~~~~~l~~~~G~~v~~g~ 256 (339)
|++.... .......+.+. ..++++-.
T Consensus 192 aTp~g~~~~~~~~~~~~~~l~~~-~~v~DivY 222 (278)
T PRK00258 192 ATSAGMSGELPLPPLPLSLLRPG-TIVYDMIY 222 (278)
T ss_pred CCcCCCCCCCCCCCCCHHHcCCC-CEEEEeec
Confidence 9875320 11234566775 67777654
No 253
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.13 E-value=0.025 Score=50.22 Aligned_cols=44 Identities=34% Similarity=0.341 Sum_probs=39.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 195 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~ 195 (339)
.+++++|+|+|+.+++++.-+...|+++|+++.|+.++.+.+.+
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 47899999999999999999999998799999999988777654
No 254
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.053 Score=47.48 Aligned_cols=81 Identities=23% Similarity=0.293 Sum_probs=50.6
Q ss_pred CCCCCEEEEEcc-CHHHHHHHHHHHHc-CCCEEEEEcCChhH-HHH----HHhcCC--ceE--EeCCCCCCccHHHHHHH
Q 019535 150 VEVGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEK-FEI----GKRFGV--TEF--VNSKNCGDKSVSQIIID 218 (339)
Q Consensus 150 ~~~~~~VLI~G~-G~iG~~a~~la~~~-G~~~Vi~~~~~~~~-~~~----~~~~ga--~~v--i~~~~~~~~~~~~~l~~ 218 (339)
+..+.++||.|+ |++|...++-+... |+ +|+.+++++++ .+. ++..+. .++ .|..+ ..++.+.+++
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~--~~~~~~~~~~ 81 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD--TDSHPKVIDA 81 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC--hHHHHHHHHH
Confidence 556789999987 89999999877666 47 89999887764 332 233332 122 33332 1233333333
Q ss_pred hcC-CCccEEEEcCCC
Q 019535 219 MTD-GGADYCFECVGL 233 (339)
Q Consensus 219 ~~~-g~~d~v~d~~g~ 233 (339)
... +++|+++.+.|.
T Consensus 82 ~~~~g~id~li~~ag~ 97 (253)
T PRK07904 82 AFAGGDVDVAIVAFGL 97 (253)
T ss_pred HHhcCCCCEEEEeeec
Confidence 332 489999987754
No 255
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.11 E-value=0.047 Score=50.82 Aligned_cols=95 Identities=17% Similarity=0.169 Sum_probs=64.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHH-HHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
.+.++||+|+|-+|..++..+...|..+|+...|+.++.+. ++++|+. ++..+ ++.+.+. .+|+||.+
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~-----el~~~l~-----~~DvViss 245 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE-----ELLEALA-----EADVVISS 245 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH-----HHHHhhh-----hCCEEEEe
Confidence 57889999999999999999999998899999999887654 5678843 33222 2333332 48999999
Q ss_pred CCCHHH---HHHHHHHhhcCCc-EEEEeccC
Q 019535 231 VGLASL---VQEAYACCRKGWG-KTIVLGVD 257 (339)
Q Consensus 231 ~g~~~~---~~~~~~~l~~~~G-~~v~~g~~ 257 (339)
++.+.. -......+..... -+++++.+
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 887542 2233334444312 35556543
No 256
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.036 Score=48.34 Aligned_cols=78 Identities=23% Similarity=0.261 Sum_probs=50.4
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC-ceEE--eCCCCCCccHHHHHHHhcC--C
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFV--NSKNCGDKSVSQIIIDMTD--G 222 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga-~~vi--~~~~~~~~~~~~~l~~~~~--g 222 (339)
+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+.+ .+. ...+ |..+ .+.+.+.+.+... +
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN--PEDVQKMVEQIDEKFG 77 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence 467899987 8999999999999999 89999988766554432 222 1222 3322 2233333333221 3
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
++|+++++.|.
T Consensus 78 ~id~lI~~ag~ 88 (252)
T PRK07677 78 RIDALINNAAG 88 (252)
T ss_pred CccEEEECCCC
Confidence 68999998863
No 257
>PRK06196 oxidoreductase; Provisional
Probab=96.08 E-value=0.043 Score=49.73 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcC-Cc-eEEeCCCCCCccHHHHHHHhcC--CCcc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG-VT-EFVNSKNCGDKSVSQIIIDMTD--GGAD 225 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~g-a~-~vi~~~~~~~~~~~~~l~~~~~--g~~d 225 (339)
.+.++||.|+ |.+|..+++.+...|+ +|+++++++++.+.+. ++. .. ...|..+ .+.+.+.+.+... +++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 3578999987 8999999998888999 8999999877655432 222 21 1233333 1223333333322 3799
Q ss_pred EEEEcCCC
Q 019535 226 YCFECVGL 233 (339)
Q Consensus 226 ~v~d~~g~ 233 (339)
++|+++|.
T Consensus 102 ~li~nAg~ 109 (315)
T PRK06196 102 ILINNAGV 109 (315)
T ss_pred EEEECCCC
Confidence 99998873
No 258
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.08 E-value=0.052 Score=47.08 Aligned_cols=79 Identities=16% Similarity=0.275 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh--HHHHHHhcCCc-eE--EeCCCCCCccHHHHHHHhcC--CC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GG 223 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~ 223 (339)
.++++||.|+ |.+|...++.+...|+ +|+.+++++. ..+.+++.+.. .+ .|..+ .+.+.+.+++... ++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 80 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD--IEAIKALVDSAVEEFGH 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHcCC
Confidence 4688999987 8999999999989999 8999987652 12333444422 22 23333 2333333333221 36
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|+++++.|.
T Consensus 81 ~d~li~~ag~ 90 (248)
T TIGR01832 81 IDILVNNAGI 90 (248)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 259
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.08 E-value=0.31 Score=42.58 Aligned_cols=101 Identities=14% Similarity=0.216 Sum_probs=64.9
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCC
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDG 222 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g 222 (339)
+.+.....++.+||-+|+|. |..+..+++ .|. ++++++.+++..+.+++... ..++..+- ..+ ....+
T Consensus 34 l~~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~---~~~-----~~~~~ 102 (251)
T PRK10258 34 LLAMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI---ESL-----PLATA 102 (251)
T ss_pred HHHhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc---ccC-----cCCCC
Confidence 33444445678899999875 666655554 577 99999999999888876542 22222111 110 11223
Q ss_pred CccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEecc
Q 019535 223 GADYCFECVG------LASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 223 ~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
.||+|+.... -...+.++.+.|+++ |.++....
T Consensus 103 ~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~ 141 (251)
T PRK10258 103 TFDLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL 141 (251)
T ss_pred cEEEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence 7999986432 234588899999997 99887643
No 260
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.053 Score=47.78 Aligned_cols=79 Identities=18% Similarity=0.247 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c----CCc-e--EEeCCCCCCccHHHHHHHhc-C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-E--FVNSKNCGDKSVSQIIIDMT-D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~----ga~-~--vi~~~~~~~~~~~~~l~~~~-~ 221 (339)
.++++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ + +.. . ..|..+ .+++.+.+.+.. -
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence 4678999987 8999999999999999 89999988776554432 1 321 1 233333 223333333322 1
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|+++++.|.
T Consensus 84 g~iD~lv~nag~ 95 (263)
T PRK08339 84 GEPDIFFFSTGG 95 (263)
T ss_pred CCCcEEEECCCC
Confidence 479999998874
No 261
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.046 Score=47.68 Aligned_cols=79 Identities=19% Similarity=0.239 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eEE--eCCCCCCccHHHHHHHhcC--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~vi--~~~~~~~~~~~~~l~~~~~-- 221 (339)
.+.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+. ..+.. ..+ |..+ .+...+.+.+...
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF 81 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 3578999987 8999999999889999 8999998877665442 23322 222 3332 1222222332221
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|+++|.
T Consensus 82 ~~id~li~~ag~ 93 (254)
T PRK07478 82 GGLDIAFNNAGT 93 (254)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 262
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.03 E-value=0.067 Score=45.75 Aligned_cols=95 Identities=18% Similarity=0.238 Sum_probs=63.1
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce--EEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--FVNSKNCGDKSVSQIIIDMTDGGADYCF 228 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~--vi~~~~~~~~~~~~~l~~~~~g~~d~v~ 228 (339)
-++.+||-+|+|+ |+++..+| ..|+ .|++++.+++..+.++.-.... -+++.. ...+.+... ++.||+|+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~~-~~~FDvV~ 129 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLASA-GGQFDVVT 129 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHhc-CCCccEEE
Confidence 3788999999863 55555554 4578 9999999999998887532211 144543 333333332 14899997
Q ss_pred E-----cCCCHH-HHHHHHHHhhcCCcEEEEe
Q 019535 229 E-----CVGLAS-LVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 229 d-----~~g~~~-~~~~~~~~l~~~~G~~v~~ 254 (339)
. -+..+. .+..+.+.++|+ |.+...
T Consensus 130 cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 130 CMEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred EhhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 4 455543 478899999997 876655
No 263
>PRK07574 formate dehydrogenase; Provisional
Probab=96.03 E-value=0.072 Score=49.56 Aligned_cols=89 Identities=21% Similarity=0.219 Sum_probs=55.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 231 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~ 231 (339)
.+.+|.|+|.|.+|+..++.++.+|+ +|++.+++....+..+.+|+... .++.+.+. ..|+|+-+.
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvV~l~l 256 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH--------VSFDSLVS-----VCDVVTIHC 256 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec--------CCHHHHhh-----cCCEEEEcC
Confidence 46789999999999999999999999 99999987533333334443211 12222221 257777666
Q ss_pred CCHHHH-----HHHHHHhhcCCcEEEEec
Q 019535 232 GLASLV-----QEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 232 g~~~~~-----~~~~~~l~~~~G~~v~~g 255 (339)
+..... ...+..|+++ ..+|.++
T Consensus 257 Plt~~T~~li~~~~l~~mk~g-a~lIN~a 284 (385)
T PRK07574 257 PLHPETEHLFDADVLSRMKRG-SYLVNTA 284 (385)
T ss_pred CCCHHHHHHhCHHHHhcCCCC-cEEEECC
Confidence 532212 2345566665 5555554
No 264
>PRK06484 short chain dehydrogenase; Validated
Probab=96.02 E-value=0.11 Score=50.55 Aligned_cols=102 Identities=23% Similarity=0.255 Sum_probs=67.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc---eEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT---EFVNSKNCGDKSVSQIIIDMTD--GGA 224 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~---~vi~~~~~~~~~~~~~l~~~~~--g~~ 224 (339)
.++++||.|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++.. ...|..+ .+.+.+.+.+... +.+
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGRL 344 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 5788999987 8999999999999999 99999998877766543 4432 1234333 2233333333322 379
Q ss_pred cEEEEcCCCH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535 225 DYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 225 d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
|++|+++|.. ...+.++..+..+ |+++.++..
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 9999988741 0134445566665 899988754
No 265
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.01 E-value=0.043 Score=48.61 Aligned_cols=78 Identities=18% Similarity=0.219 Sum_probs=49.2
Q ss_pred CCCEEEEEccC---HHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCceE--EeCCCCCCccHHHHHHHhcC-
Q 019535 152 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF--VNSKNCGDKSVSQIIIDMTD- 221 (339)
Q Consensus 152 ~~~~VLI~G~G---~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~v--i~~~~~~~~~~~~~l~~~~~- 221 (339)
.++++||.|++ ++|.+.++.+...|+ +|+.+.++.+..+.+ +++|.... .|..+ .+.+.+.+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d--~~~v~~~~~~~~~~ 82 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED--IASVDAVFEALEKK 82 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC--HHHHHHHHHHHHHH
Confidence 46789999874 899999999999999 888888764322222 23453322 23333 2233333333322
Q ss_pred -CCccEEEEcCC
Q 019535 222 -GGADYCFECVG 232 (339)
Q Consensus 222 -g~~d~v~d~~g 232 (339)
+.+|++++++|
T Consensus 83 ~g~iD~lVnnAG 94 (271)
T PRK06505 83 WGKLDFVVHAIG 94 (271)
T ss_pred hCCCCEEEECCc
Confidence 47999999887
No 266
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.01 E-value=0.23 Score=43.81 Aligned_cols=103 Identities=16% Similarity=0.210 Sum_probs=59.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-------------------H----HHHHHhcCC-ceEEeCCCC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------K----FEIGKRFGV-TEFVNSKNC 207 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-------------------~----~~~~~~~ga-~~vi~~~~~ 207 (339)
.+.+|+|+|+|++|..++..+...|..+++.++.+.- | .+.++++.. ..+...++.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 4578999999999999999999999888888876521 1 111122221 122222220
Q ss_pred CCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 208 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 208 ~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
. ..+.+.++....+|+||||++....-..+.+.+....-.++..+..
T Consensus 109 i---~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 109 I---TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred c---ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence 0 1122333333379999999998654444455544431345555443
No 267
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=96.01 E-value=0.038 Score=47.81 Aligned_cols=120 Identities=23% Similarity=0.417 Sum_probs=68.0
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQII 216 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l 216 (339)
+.+....+++.+||-+|+|. |..+..+++..+. .+|++++.+++.++.+++ .+.. ..+..+. +++
T Consensus 39 ~~~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da---~~l---- 110 (233)
T PF01209_consen 39 LIKLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA---EDL---- 110 (233)
T ss_dssp HHHHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT---TB-----
T ss_pred HHhccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH---HHh----
Confidence 34445678899999998763 7788888888763 289999999999888864 2321 1222221 121
Q ss_pred HHhcCCCccEEEEcCCC------HHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHhhc
Q 019535 217 IDMTDGGADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS 273 (339)
Q Consensus 217 ~~~~~g~~d~v~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 273 (339)
...++.||+|.-+.|- ...++++.+.|+|+ |+++.+....+....-.....++.+
T Consensus 111 -p~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~p~~~~~~~~~~~y~~ 171 (233)
T PF01209_consen 111 -PFPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSKPRNPLLRALYKFYFK 171 (233)
T ss_dssp --S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB-SSHHHHHHHHH---
T ss_pred -cCCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccCCCCchhhceeeeeec
Confidence 1112369999865542 44589999999998 9999888764433322233344443
No 268
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.00 E-value=0.031 Score=49.90 Aligned_cols=76 Identities=13% Similarity=0.025 Sum_probs=51.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCc-eEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 229 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~-~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d 229 (339)
.+.+++|+|+|+.|++++.-+..+|+++|+++.|++++.+.+. .++.. .+.... ..+.+... ...+|+||+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~------~~~~~~~~-~~~~DiVIn 196 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE------GDSGGLAI-EKAAEVLVS 196 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc------chhhhhhc-ccCCCEEEE
Confidence 5778999999999999999999999988999999988776653 34321 111111 00111111 125899999
Q ss_pred cCCCH
Q 019535 230 CVGLA 234 (339)
Q Consensus 230 ~~g~~ 234 (339)
|++..
T Consensus 197 aTp~g 201 (282)
T TIGR01809 197 TVPAD 201 (282)
T ss_pred CCCCC
Confidence 98753
No 269
>PLN02823 spermine synthase
Probab=95.99 E-value=0.079 Score=48.37 Aligned_cols=101 Identities=18% Similarity=0.126 Sum_probs=62.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC-Cc-eEEeCCCC--CCccHHHHHHHhcCCCccEE
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-VT-EFVNSKNC--GDKSVSQIIIDMTDGGADYC 227 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g-a~-~vi~~~~~--~~~~~~~~l~~~~~g~~d~v 227 (339)
..++|||+|+|. |..+..+++..+.++|++++.+++-.+.++++- .. ..++.... ...|-.+.+++ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 457899998763 566667777666668999999999988887632 10 00100000 01334444533 33489999
Q ss_pred E-EcCC----C-------HHHHH-HHHHHhhcCCcEEEEec
Q 019535 228 F-ECVG----L-------ASLVQ-EAYACCRKGWGKTIVLG 255 (339)
Q Consensus 228 ~-d~~g----~-------~~~~~-~~~~~l~~~~G~~v~~g 255 (339)
| |+.. + .+-++ .+.+.|+++ |.++.-.
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~ 220 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA 220 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence 8 6432 1 12255 788899998 9887653
No 270
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.046 Score=48.02 Aligned_cols=79 Identities=23% Similarity=0.283 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----c-CCc---eEEeCCCCCCccHHHHHHHhc-
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----F-GVT---EFVNSKNCGDKSVSQIIIDMT- 220 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----~-ga~---~vi~~~~~~~~~~~~~l~~~~- 220 (339)
.++++||.|+ +.+|.+.++.+...|+ +|+.+++++++.+.+.+ . +.. ...|..+ .+.+.+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 4678999987 8999999999999999 89999998876554321 1 111 1224333 122323333322
Q ss_pred -CCCccEEEEcCCC
Q 019535 221 -DGGADYCFECVGL 233 (339)
Q Consensus 221 -~g~~d~v~d~~g~ 233 (339)
-+++|++++++|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 1379999999874
No 271
>PRK05717 oxidoreductase; Validated
Probab=95.96 E-value=0.053 Score=47.36 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-e--EEeCCCCCCccHHHHHHHhcC--CCc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-E--FVNSKNCGDKSVSQIIIDMTD--GGA 224 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~--vi~~~~~~~~~~~~~l~~~~~--g~~ 224 (339)
.+.++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +.++.. . ..|..+ ...+.+.+.+... +++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 3678999987 9999999999988999 899988776554443 334422 1 233333 1223222333322 368
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|++|.+.|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998874
No 272
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.95 E-value=0.11 Score=45.64 Aligned_cols=100 Identities=19% Similarity=0.164 Sum_probs=67.3
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCC
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDG 222 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g 222 (339)
+.....+.++++||-+|+|. |..+..+++..+..+|++++.+++..+.+++.-. ..++.. +.. .+...
T Consensus 23 ll~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~------d~~----~~~~~ 91 (258)
T PRK01683 23 LLARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA------DIA----SWQPP 91 (258)
T ss_pred HHhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC------chh----ccCCC
Confidence 34455667889999999863 7777888877743499999999998888866422 122221 211 11222
Q ss_pred -CccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEec
Q 019535 223 -GADYCFECVG------LASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 223 -~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
.+|+|+.... ....++.+.+.|+++ |.++...
T Consensus 92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 92 QALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred CCccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 7999975332 234588899999998 9988753
No 273
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.95 E-value=0.071 Score=46.59 Aligned_cols=79 Identities=22% Similarity=0.241 Sum_probs=50.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce-E--EeCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~-v--i~~~~~~~~~~~~~l~~~~--~ 221 (339)
.+.++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.+... . .|..+ ...+.+.+.... .
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN--EDAVNAGIDKVAERF 82 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 3678999987 9999999999999999 899999887654433 3344332 1 22222 122222222221 1
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|.+.|.
T Consensus 83 ~~~d~vi~~ag~ 94 (262)
T PRK13394 83 GSVDILVSNAGI 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 368999998874
No 274
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.94 E-value=0.14 Score=46.73 Aligned_cols=94 Identities=18% Similarity=0.101 Sum_probs=63.6
Q ss_pred CCCCEEEEEccCHHHHHHHHH-HHHcCCCEEEEEcCChhHHHHHH-h----cCCceEEeCCCCCCccHHHHHHHhcCCCc
Q 019535 151 EVGSTVVIFGLGSIGLAVAEG-ARLCGATRIIGVDVISEKFEIGK-R----FGVTEFVNSKNCGDKSVSQIIIDMTDGGA 224 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~l-a~~~G~~~Vi~~~~~~~~~~~~~-~----~ga~~vi~~~~~~~~~~~~~l~~~~~g~~ 224 (339)
....+++|+|+|..|...+.. +...++++|.++++++++.+.+. + ++.. +... .++.+.+ ...
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~-----~~~~~~~-----~~a 193 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV-----NSADEAI-----EEA 193 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe-----CCHHHHH-----hcC
Confidence 456789999999999877654 45668889999999988765543 2 2432 2112 2333333 248
Q ss_pred cEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 225 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 225 d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+|+.|+++...+ .. +.++++ -+++.+|...
T Consensus 194 DiVi~aT~s~~p~-i~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 194 DIIVTVTNAKTPV-FS-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred CEEEEccCCCCcc-hH-HhcCCC-cEEEecCCCC
Confidence 9999999877633 34 788886 7777888654
No 275
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.94 E-value=0.11 Score=45.67 Aligned_cols=97 Identities=23% Similarity=0.145 Sum_probs=68.1
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhc-C
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT-D 221 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~-~ 221 (339)
+.......++.+||-+|+|. |..+..+++.. +. +|++++.++...+.+++.+...+. .+.. ++. .
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-------~d~~----~~~~~ 87 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-------GDVR----DWKPK 87 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-------cChh----hCCCC
Confidence 45556677889999999874 77777787775 55 899999999988888776543221 1221 122 2
Q ss_pred CCccEEEEcC-----CC-HHHHHHHHHHhhcCCcEEEEe
Q 019535 222 GGADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 222 g~~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~ 254 (339)
+.||+|+... .. ...++.+.+.|+++ |.++..
T Consensus 88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 3799998533 22 44578889999998 998765
No 276
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.056 Score=46.84 Aligned_cols=79 Identities=22% Similarity=0.240 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eE--EeCCCCCCccHHHHHHHhc--CCCc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGA 224 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~ 224 (339)
++.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++.. .. .|..+ ..+..+.+.... .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 3678999987 9999999999999999 899999887665444 345532 12 23222 122222222221 2378
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|++|++.|.
T Consensus 82 d~vi~~ag~ 90 (249)
T PRK06500 82 DAVFINAGV 90 (249)
T ss_pred CEEEECCCC
Confidence 999998874
No 277
>PRK06128 oxidoreductase; Provisional
Probab=95.91 E-value=0.14 Score=46.04 Aligned_cols=102 Identities=23% Similarity=0.171 Sum_probs=60.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH--H----HHHHhcCCce-E--EeCCCCCCccHHHHHHHhc-
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--F----EIGKRFGVTE-F--VNSKNCGDKSVSQIIIDMT- 220 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~--~----~~~~~~ga~~-v--i~~~~~~~~~~~~~l~~~~- 220 (339)
.+.++||.|+ |.+|.++++.+...|+ +|+.+.++.+. . +.++..|... + .|..+ .+.+.+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 130 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAVK 130 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHHH
Confidence 4678999987 8999999999988999 88777654321 1 2233344322 2 23332 122223333222
Q ss_pred -CCCccEEEEcCCCH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535 221 -DGGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 221 -~g~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
-+++|++|+++|.. ...+.+++.+..+ |+++.++..
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~ 193 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSI 193 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCc
Confidence 13799999988731 1233444555665 898888653
No 278
>PLN03075 nicotianamine synthase; Provisional
Probab=95.90 E-value=0.071 Score=47.54 Aligned_cols=98 Identities=13% Similarity=0.119 Sum_probs=65.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHhcC-----CceEEeCCCCCCccHHHHHHHhcCCCcc
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFG-----VTEFVNSKNCGDKSVSQIIIDMTDGGAD 225 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~~g-----a~~vi~~~~~~~~~~~~~l~~~~~g~~d 225 (339)
.+++|+-+|+|+.+..++.+++.+.. .+++.++.+++..+.+++.- ...-+.... .+..+... ..+.||
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~~~--~l~~FD 197 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDVTE--SLKEYD 197 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhccc--ccCCcC
Confidence 77899999999989988888866532 27999999999888887632 112122222 23322110 124799
Q ss_pred EEEEcC-------CCHHHHHHHHHHhhcCCcEEEEec
Q 019535 226 YCFECV-------GLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 226 ~v~d~~-------g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+||-.+ .....++...+.|+++ |.++.=.
T Consensus 198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 198 VVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred EEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 998544 2345588999999997 8766543
No 279
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.90 E-value=0.05 Score=49.53 Aligned_cols=80 Identities=18% Similarity=0.170 Sum_probs=53.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----cC-Cc---eEEeCCCCCCccHHHHHHHhcC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FG-VT---EFVNSKNCGDKSVSQIIIDMTD 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----~g-a~---~vi~~~~~~~~~~~~~l~~~~~ 221 (339)
.+.+++|.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ .+ .. ..+|..+ ...+..+.+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 4789999987 8999999988888899 89999999887665422 22 11 1234332 11233445555555
Q ss_pred C-CccEEEEcCCC
Q 019535 222 G-GADYCFECVGL 233 (339)
Q Consensus 222 g-~~d~v~d~~g~ 233 (339)
+ .+|++++++|.
T Consensus 130 ~~didilVnnAG~ 142 (320)
T PLN02780 130 GLDVGVLINNVGV 142 (320)
T ss_pred CCCccEEEEecCc
Confidence 5 67799988763
No 280
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.90 E-value=0.12 Score=40.94 Aligned_cols=32 Identities=28% Similarity=0.453 Sum_probs=28.4
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~ 186 (339)
+|+|+|+|++|...++.+...|.+++..++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48999999999999999999999888888754
No 281
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.89 E-value=0.06 Score=47.19 Aligned_cols=76 Identities=20% Similarity=0.257 Sum_probs=49.2
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCceE--EeCCCCCCccHHHHHHHhcC--CCcc
Q 019535 155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEF--VNSKNCGDKSVSQIIIDMTD--GGAD 225 (339)
Q Consensus 155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~v--i~~~~~~~~~~~~~l~~~~~--g~~d 225 (339)
++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+..+. .|..+ .+.+.+.+.+... +++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD--KDDLKNLVKEAWELLGGID 78 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC--HHHHHHHHHHHHHhcCCCC
Confidence 5899987 8999999999888999 8999998877654432 2232222 23322 1233333333222 3799
Q ss_pred EEEEcCCC
Q 019535 226 YCFECVGL 233 (339)
Q Consensus 226 ~v~d~~g~ 233 (339)
++|++.|.
T Consensus 79 ~li~naG~ 86 (259)
T PRK08340 79 ALVWNAGN 86 (259)
T ss_pred EEEECCCC
Confidence 99998874
No 282
>PLN03139 formate dehydrogenase; Provisional
Probab=95.89 E-value=0.092 Score=48.85 Aligned_cols=89 Identities=19% Similarity=0.175 Sum_probs=55.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 231 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~ 231 (339)
.+.+|.|+|.|.+|+..++.++.+|+ +|++.+++....+..+..|+..+ .++.+.+. ..|+|+-+.
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~-----~sDvV~l~l 263 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE--------EDLDAMLP-----KCDVVVINT 263 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec--------CCHHHHHh-----hCCEEEEeC
Confidence 57899999999999999999999999 89999876544443344443211 12222221 256776655
Q ss_pred CCHHHH-----HHHHHHhhcCCcEEEEec
Q 019535 232 GLASLV-----QEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 232 g~~~~~-----~~~~~~l~~~~G~~v~~g 255 (339)
+..... ...+..|+++ ..+|.++
T Consensus 264 Plt~~T~~li~~~~l~~mk~g-a~lIN~a 291 (386)
T PLN03139 264 PLTEKTRGMFNKERIAKMKKG-VLIVNNA 291 (386)
T ss_pred CCCHHHHHHhCHHHHhhCCCC-eEEEECC
Confidence 532211 2345566664 5555554
No 283
>PLN02244 tocopherol O-methyltransferase
Probab=95.88 E-value=0.056 Score=49.64 Aligned_cols=95 Identities=21% Similarity=0.273 Sum_probs=63.9
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCc---eEEeCCCCCCccHHHHHHHhcCCC
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT---EFVNSKNCGDKSVSQIIIDMTDGG 223 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~---~vi~~~~~~~~~~~~~l~~~~~g~ 223 (339)
+++++||-+|+|. |..+..+++..|+ +|++++.++...+.+++. |.. .++..+. .++ .+..+.
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~~-----~~~~~~ 186 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LNQ-----PFEDGQ 186 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---ccC-----CCCCCC
Confidence 6788999999874 6777888888888 999999999877766542 321 1221111 110 112247
Q ss_pred ccEEEEcCC-----C-HHHHHHHHHHhhcCCcEEEEecc
Q 019535 224 ADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 224 ~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
||+|+.... . ...++++.+.|+++ |++++...
T Consensus 187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 187 FDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred ccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 999985322 1 34578999999998 99988653
No 284
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.88 E-value=0.093 Score=46.60 Aligned_cols=99 Identities=13% Similarity=0.161 Sum_probs=66.1
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CCce-EE-eCCC-CCCccHHHHHHHhcCCCccEEE-
Q 019535 154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTE-FV-NSKN-CGDKSVSQIIIDMTDGGADYCF- 228 (339)
Q Consensus 154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga~~-vi-~~~~-~~~~~~~~~l~~~~~g~~d~v~- 228 (339)
.+|||+|+|. |..+-.+++....+++++++.+++=.+.++++ +... -. |.+- ....|-.+.+++... ++|+||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 5999998654 56666778888788999999999988888763 2111 00 1110 001344455554433 799998
Q ss_pred EcCCC---------HHHHHHHHHHhhcCCcEEEEec
Q 019535 229 ECVGL---------ASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 229 d~~g~---------~~~~~~~~~~l~~~~G~~v~~g 255 (339)
|+... ..-.+.+.++|+++ |.++.-+
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q~ 190 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQA 190 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEec
Confidence 65543 45588999999998 9988874
No 285
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.88 E-value=0.049 Score=52.33 Aligned_cols=78 Identities=24% Similarity=0.332 Sum_probs=54.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh---------------------hHHHHHHhcCCceEEeCCCCCCc
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS---------------------EKFEIGKRFGVTEFVNSKNCGDK 210 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~---------------------~~~~~~~~~ga~~vi~~~~~~~~ 210 (339)
.+++|+|+|+|+.|+.++..++..|+ +|+.++..+ ...++++++|.+..++..-. .
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~--~ 216 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG--R 216 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC--C
Confidence 57899999999999999999999999 788887653 23566778887655544220 1
Q ss_pred cHHHHHHHhcCCCccEEEEcCCCHH
Q 019535 211 SVSQIIIDMTDGGADYCFECVGLAS 235 (339)
Q Consensus 211 ~~~~~l~~~~~g~~d~v~d~~g~~~ 235 (339)
++ .+..+. ..+|.||.++|...
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCCC
Confidence 11 111111 26999999998743
No 286
>PLN00203 glutamyl-tRNA reductase
Probab=95.88 E-value=0.048 Score=52.75 Aligned_cols=73 Identities=18% Similarity=0.276 Sum_probs=51.6
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcC-Cce-EEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG-VTE-FVNSKNCGDKSVSQIIIDMTDGGADYCFE 229 (339)
Q Consensus 153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~g-a~~-vi~~~~~~~~~~~~~l~~~~~g~~d~v~d 229 (339)
+.+|+|+|+|.+|.++++.+...|+++|+++.++.++.+.+. .++ ... +... .+..+.+ ..+|+||.
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~-----~dl~~al-----~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPL-----DEMLACA-----AEADVVFT 335 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH-----hhHHHHH-----hcCCEEEE
Confidence 688999999999999999999999878999999988876654 353 221 1111 1222222 25899999
Q ss_pred cCCCHH
Q 019535 230 CVGLAS 235 (339)
Q Consensus 230 ~~g~~~ 235 (339)
|++.+.
T Consensus 336 AT~s~~ 341 (519)
T PLN00203 336 STSSET 341 (519)
T ss_pred ccCCCC
Confidence 987543
No 287
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.064 Score=47.24 Aligned_cols=78 Identities=19% Similarity=0.251 Sum_probs=50.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-e--EEeCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-E--FVNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~--vi~~~~~~~~~~~~~l~~~~--~ 221 (339)
++.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.. ...+.. . .+|..+ ...+.+.+.+.. .
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADEF 84 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 4779999987 8999999998889999 899999887665433 222322 1 233333 122333333332 2
Q ss_pred CCccEEEEcCC
Q 019535 222 GGADYCFECVG 232 (339)
Q Consensus 222 g~~d~v~d~~g 232 (339)
+++|++|.+.|
T Consensus 85 ~~iD~vi~~ag 95 (264)
T PRK07576 85 GPIDVLVSGAA 95 (264)
T ss_pred CCCCEEEECCC
Confidence 37899998875
No 288
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.84 E-value=0.053 Score=54.24 Aligned_cols=77 Identities=26% Similarity=0.286 Sum_probs=55.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------HHHHHHhcCCceEEeCCCCCCc
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGDK 210 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~---------------------~~~~~~~~ga~~vi~~~~~~~~ 210 (339)
.+++|+|+|+|+.|+.++..++..|+ +|+++++.+. +.++++++|++..++..-....
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 47999999999999999999999999 8888876652 4566677887766554320011
Q ss_pred cHHHHHHHhcCCCccEEEEcCCCH
Q 019535 211 SVSQIIIDMTDGGADYCFECVGLA 234 (339)
Q Consensus 211 ~~~~~l~~~~~g~~d~v~d~~g~~ 234 (339)
.+ .++. ..+|.||.++|..
T Consensus 388 ~~----~~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH-hcCCEEEEeCCCC
Confidence 22 1221 2699999999864
No 289
>PRK08643 acetoin reductase; Validated
Probab=95.83 E-value=0.063 Score=46.87 Aligned_cols=78 Identities=17% Similarity=0.192 Sum_probs=50.1
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHHHHHHhc--CC
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMT--DG 222 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g 222 (339)
++++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+. ..+.. .. .|..+ .+.+.+.+.+.. .+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 468899987 8999999999989999 8999998876654432 22322 11 23333 222333333322 13
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
++|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 79999998864
No 290
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.078 Score=46.52 Aligned_cols=79 Identities=23% Similarity=0.334 Sum_probs=50.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c--CC-ceE--EeCCCCCCccHHHHHHHhc-CCC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GV-TEF--VNSKNCGDKSVSQIIIDMT-DGG 223 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~--ga-~~v--i~~~~~~~~~~~~~l~~~~-~g~ 223 (339)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.. + +. ... .|..+ .+.+.+...... .+.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS--EAGREAVLARAREMGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHhcCC
Confidence 3578999986 8999999998888999 89999998876655532 2 21 122 22222 122222222211 247
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|+++.++|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 8999998875
No 291
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.81 E-value=0.067 Score=46.69 Aligned_cols=79 Identities=24% Similarity=0.319 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~ 221 (339)
.+.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+ +..|.. .. .|..+ .+.+.+.+.+.. .
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 4678999987 9999999998888899 899999887655433 222322 12 23333 122333332221 2
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|++.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 292
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.071 Score=46.59 Aligned_cols=80 Identities=19% Similarity=0.205 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHH----HHHhcCCce---EEeCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGVTE---FVNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~----~~~~~ga~~---vi~~~~~~~~~~~~~l~~~~--~ 221 (339)
.+.+++|.|+ |.+|..+++.+...|++.|+++++++++.+ .++..+... ..|..+ .+.+.+.+.... .
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEAF 82 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4678999987 899999999999999933999998766544 223334321 233333 122222222221 1
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|++.|.
T Consensus 83 g~id~li~~ag~ 94 (260)
T PRK06198 83 GRLDALVNAAGL 94 (260)
T ss_pred CCCCEEEECCCc
Confidence 369999999874
No 293
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.067 Score=47.29 Aligned_cols=77 Identities=21% Similarity=0.329 Sum_probs=49.5
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hh---cC--C-ceEE--eCCCCCCccHHHHHHHhcC-
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KR---FG--V-TEFV--NSKNCGDKSVSQIIIDMTD- 221 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~---~g--a-~~vi--~~~~~~~~~~~~~l~~~~~- 221 (339)
+.++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.. ++ .+ . ..++ |..+ .+.+.+.+.+...
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 83 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD--EDQVARAVDAATAW 83 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 578999987 8999999999999999 899999887654433 22 11 1 1222 3322 1223233333221
Q ss_pred -CCccEEEEcCC
Q 019535 222 -GGADYCFECVG 232 (339)
Q Consensus 222 -g~~d~v~d~~g 232 (339)
+++|++|.+.|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 37899999887
No 294
>PRK08317 hypothetical protein; Provisional
Probab=95.79 E-value=0.13 Score=44.24 Aligned_cols=102 Identities=27% Similarity=0.392 Sum_probs=68.7
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHhc----CC-ceEEeCCCCCCccHHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF----GV-TEFVNSKNCGDKSVSQIII 217 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~~----ga-~~vi~~~~~~~~~~~~~l~ 217 (339)
+.+..++.++.+||.+|+|. |..+..+++..+ ..++++++.+++..+.+++. +. ..+...+. ...
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~----- 81 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL----- 81 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence 44567788899999999875 888888888773 23899999999888887664 11 11221111 110
Q ss_pred HhcCCCccEEEEcC-----C-CHHHHHHHHHHhhcCCcEEEEec
Q 019535 218 DMTDGGADYCFECV-----G-LASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 218 ~~~~g~~d~v~d~~-----g-~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
.+..+.+|+|+... . -...++.+.++|+++ |.++...
T Consensus 82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 12223789887421 2 234588999999998 9988765
No 295
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.79 E-value=0.065 Score=47.02 Aligned_cols=78 Identities=14% Similarity=0.280 Sum_probs=48.3
Q ss_pred CCCEEEEEccC---HHHHHHHHHHHHcCCCEEEEEcCChhHHH---HH-HhcCCceEE--eCCCCCCccHHHHHHHhcC-
Q 019535 152 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFE---IG-KRFGVTEFV--NSKNCGDKSVSQIIIDMTD- 221 (339)
Q Consensus 152 ~~~~VLI~G~G---~iG~~a~~la~~~G~~~Vi~~~~~~~~~~---~~-~~~ga~~vi--~~~~~~~~~~~~~l~~~~~- 221 (339)
.++++||.|++ ++|.++++.+...|+ +|+.+.++.+..+ .+ ++++...++ |..+ .+++.+.+.+...
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 85 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE--PGQLEAVFARIAEE 85 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC--HHHHHHHHHHHHHH
Confidence 46789999863 899999999888999 8888887754322 22 233432222 3222 2333333333221
Q ss_pred -CCccEEEEcCC
Q 019535 222 -GGADYCFECVG 232 (339)
Q Consensus 222 -g~~d~v~d~~g 232 (339)
+.+|++++++|
T Consensus 86 ~g~ld~lv~nAg 97 (258)
T PRK07533 86 WGRLDFLLHSIA 97 (258)
T ss_pred cCCCCEEEEcCc
Confidence 47999999876
No 296
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.78 E-value=0.073 Score=46.57 Aligned_cols=79 Identities=20% Similarity=0.372 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-- 221 (339)
.+.++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+. ..+.. .. .|..+ .+.+.+.+.++..
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLERF 87 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4678999987 9999999999888999 8999999877655543 22322 12 23333 2233332333222
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|.++|.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 297
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.78 E-value=0.05 Score=45.67 Aligned_cols=100 Identities=12% Similarity=0.191 Sum_probs=61.5
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCceEEeCCCCCCccHHHHHHHh
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDM 219 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~~vi~~~~~~~~~~~~~l~~~ 219 (339)
+.+.....++.+||.+|+|. |..+..+++ .|. +|++++.+++..+.+++. +.. +.... .+... ...
T Consensus 22 l~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~--~~~ 91 (195)
T TIGR00477 22 VREAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA--AAL 91 (195)
T ss_pred HHHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh--ccc
Confidence 44445555677899999863 677777766 477 999999999877766442 322 11111 11110 011
Q ss_pred cCCCccEEEEcC-----CC---HHHHHHHHHHhhcCCcEEEEec
Q 019535 220 TDGGADYCFECV-----GL---ASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 220 ~~g~~d~v~d~~-----g~---~~~~~~~~~~l~~~~G~~v~~g 255 (339)
.+.+|+|+... .. ...++.+.+.|+++ |.++.+.
T Consensus 92 -~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 92 -NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred -cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 23699997542 21 34577888899998 9865554
No 298
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.76 E-value=0.071 Score=45.92 Aligned_cols=78 Identities=23% Similarity=0.308 Sum_probs=50.9
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce-E--EeCCCCCCccHHHHHHHhcC--C
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMTD--G 222 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~-v--i~~~~~~~~~~~~~l~~~~~--g 222 (339)
+.++||+|+ |.+|...++.+...|. +|+++.+++++.+.+ +..+... . .|..+ ...+.+.+.+... +
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence 468999987 9999999998888999 799999987765443 2334322 2 23333 2223333333221 3
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
.+|.++.++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998864
No 299
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.76 E-value=0.084 Score=46.32 Aligned_cols=94 Identities=22% Similarity=0.277 Sum_probs=62.7
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCc---eEEeCCCCCCccHHHHHHHhcCCC
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT---EFVNSKNCGDKSVSQIIIDMTDGG 223 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~---~vi~~~~~~~~~~~~~l~~~~~g~ 223 (339)
..+.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++. |.. .++. .+..+ +.....+.
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~------~d~~~-l~~~~~~~ 112 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH------CAAQD-IAQHLETP 112 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE------cCHHH-HhhhcCCC
Confidence 4567899999874 7778888775 77 999999999988887652 321 1221 12222 22223347
Q ss_pred ccEEEEcC-----CC-HHHHHHHHHHhhcCCcEEEEec
Q 019535 224 ADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 224 ~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+|+|+... .. ...++.+.+.|+++ |.++.+-
T Consensus 113 fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 149 (255)
T PRK11036 113 VDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF 149 (255)
T ss_pred CCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 99998432 22 34488999999998 9987663
No 300
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.089 Score=45.43 Aligned_cols=79 Identities=20% Similarity=0.230 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-e--EEeCCCCCCccHHHHHHHhcC--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-E--FVNSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~--vi~~~~~~~~~~~~~l~~~~~-- 221 (339)
...++||.|+ |.+|..++..+...|. +|+++++++++.+.+. +.+.. . ..|..+ .+.+...+.....
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN--PEAIAPGIAELLEQF 81 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4568999987 9999999999999999 8999999877654442 22221 1 223333 1233233333221
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|+++++.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 369999998874
No 301
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.077 Score=45.47 Aligned_cols=74 Identities=19% Similarity=0.246 Sum_probs=48.7
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCceE-EeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535 155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFECV 231 (339)
Q Consensus 155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v~d~~ 231 (339)
+++|.|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ++++...+ .|..+ .+.+.+.+... .+.+|+++++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~-~~~id~lv~~a 77 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLF-PHHLDTIVNVP 77 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHH-hhcCcEEEECC
Confidence 5899987 8999999999888999 899999888776554 33443322 34333 12232322222 23689999876
Q ss_pred C
Q 019535 232 G 232 (339)
Q Consensus 232 g 232 (339)
|
T Consensus 78 g 78 (223)
T PRK05884 78 A 78 (223)
T ss_pred C
Confidence 4
No 302
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.072 Score=46.27 Aligned_cols=79 Identities=22% Similarity=0.205 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c--CCc-eE--EeCCCCCCccHHHHHHHhcC--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GVT-EF--VNSKNCGDKSVSQIIIDMTD--G 222 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~--ga~-~v--i~~~~~~~~~~~~~l~~~~~--g 222 (339)
.+.++||.|+ |.+|...++.+...|+ +|+.+.++.++.+.... + +.. .+ .|..+ ...+.+.+.+... +
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS--AEAVEALVDFVAARWG 80 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 3578999987 9999999988888899 89999988765543322 2 321 22 23222 1222232332221 3
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
++|++|.+.|.
T Consensus 81 ~id~vi~~ag~ 91 (252)
T PRK06138 81 RLDVLVNNAGF 91 (252)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 303
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.74 E-value=0.044 Score=46.65 Aligned_cols=100 Identities=18% Similarity=0.174 Sum_probs=64.8
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIII 217 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l~ 217 (339)
+...++++++.+||-+|+|. |..+..+++.. . +|++++.+++..+.+++ .+... +...+ ..+
T Consensus 70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~--- 137 (212)
T PRK00312 70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGD------GWK--- 137 (212)
T ss_pred HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECC------ccc---
Confidence 45567788999999998863 55566666654 3 89999999887766643 34322 22211 111
Q ss_pred HhcC-CCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 218 DMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 218 ~~~~-g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
.+.. +.||+|+-........+.+.+.|+++ |+++..-.
T Consensus 138 ~~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~~ 176 (212)
T PRK00312 138 GWPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPVG 176 (212)
T ss_pred CCCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEEc
Confidence 1111 37999986555455577888999997 99876543
No 304
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.74 E-value=0.17 Score=44.33 Aligned_cols=78 Identities=17% Similarity=0.261 Sum_probs=47.6
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCCh---hHHHHH-Hhc-CCc-e--EEeCCCCCCccHHHHHHHhc
Q 019535 152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEIG-KRF-GVT-E--FVNSKNCGDKSVSQIIIDMT 220 (339)
Q Consensus 152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~---~~~~~~-~~~-ga~-~--vi~~~~~~~~~~~~~l~~~~ 220 (339)
.+++++|.|+ +++|.++++.+...|+ +|+.+.++. ++.+.+ +++ +.. . ..|..+ .+...+.+.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 82 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK 82 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence 4678999986 5999999988888999 888886543 333333 223 211 1 234333 233333333332
Q ss_pred C--CCccEEEEcCC
Q 019535 221 D--GGADYCFECVG 232 (339)
Q Consensus 221 ~--g~~d~v~d~~g 232 (339)
. +++|++++++|
T Consensus 83 ~~~g~ld~lv~nag 96 (257)
T PRK08594 83 EEVGVIHGVAHCIA 96 (257)
T ss_pred HhCCCccEEEECcc
Confidence 2 47999998876
No 305
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.73 E-value=0.029 Score=44.83 Aligned_cols=90 Identities=21% Similarity=0.218 Sum_probs=54.9
Q ss_pred EEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-------EeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535 156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-------VNSKNCGDKSVSQIIIDMTDGGADYCF 228 (339)
Q Consensus 156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-------i~~~~~~~~~~~~~l~~~~~g~~d~v~ 228 (339)
|+|+|+|++|...+..++..|. +|..+.+.+ +.+.+++.|.... +.... ..... ....+.+|++|
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~D~vi 72 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPI----VISAP--SADAGPYDLVI 72 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEE----EESSH--GHHHSTESEEE
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceeccccc----ccCcc--hhccCCCcEEE
Confidence 6899999999999888888999 899999877 7777766552111 11100 00000 11123799999
Q ss_pred EcCCCHHHHHHHHH----HhhcCCcEEEEec
Q 019535 229 ECVGLASLVQEAYA----CCRKGWGKTIVLG 255 (339)
Q Consensus 229 d~~g~~~~~~~~~~----~l~~~~G~~v~~g 255 (339)
-|+-... .+.+++ .+.++ ..++.+-
T Consensus 73 v~vKa~~-~~~~l~~l~~~~~~~-t~iv~~q 101 (151)
T PF02558_consen 73 VAVKAYQ-LEQALQSLKPYLDPN-TTIVSLQ 101 (151)
T ss_dssp E-SSGGG-HHHHHHHHCTGEETT-EEEEEES
T ss_pred EEecccc-hHHHHHHHhhccCCC-cEEEEEe
Confidence 9997655 344444 44443 4555553
No 306
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.072 Score=46.46 Aligned_cols=79 Identities=16% Similarity=0.214 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---eEEeCCCCCCccHHHHHHHhcC--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~---~vi~~~~~~~~~~~~~l~~~~~-- 221 (339)
.+.++||.|+ |.+|+..++.+...|+ +|+.+++++++.+.+.+ .+.. ...|..+ .+.+...+.+...
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 8999999999999999 89999988766544422 2321 2233332 1223333333221
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+.+|++|.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 368999998863
No 307
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.07 Score=46.61 Aligned_cols=79 Identities=19% Similarity=0.203 Sum_probs=50.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---cCCc-eE--EeCCCCCCccHHHHHHHhcC--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EF--VNSKNCGDKSVSQIIIDMTD--G 222 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g 222 (339)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+..+. .+.. .+ .|..+ .+.+...+.+... +
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD--DAQCRDAVEQTVAKFG 82 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhcC
Confidence 3678999987 8999999988888999 78888887766544333 3322 22 23222 1223333333222 3
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (258)
T PRK08628 83 RIDGLVNNAGV 93 (258)
T ss_pred CCCEEEECCcc
Confidence 79999999883
No 308
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.69 E-value=0.035 Score=53.01 Aligned_cols=92 Identities=12% Similarity=0.109 Sum_probs=60.7
Q ss_pred hcCCCCCCEEE----EEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhc
Q 019535 147 TANVEVGSTVV----IFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMT 220 (339)
Q Consensus 147 ~~~~~~~~~VL----I~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~ 220 (339)
+.+.++++++| |+|+ |++|.+++|+++..|+ .|+++...+.+....+..+.. .++|.+. ....+.+....
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~~ 103 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKALY 103 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHHH
Confidence 45567788887 7764 9999999999999999 899887666544333333433 4666555 33344443321
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 221 DGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 221 ~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
..+...++.+.++ |+++.++..
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~ 125 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRP 125 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEccc
Confidence 2255667777776 888877754
No 309
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.075 Score=46.53 Aligned_cols=79 Identities=20% Similarity=0.257 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc-----CCc-eE--EeCCCCCCccHHHHHHHhcC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-EF--VNSKNCGDKSVSQIIIDMTD 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~-----ga~-~v--i~~~~~~~~~~~~~l~~~~~ 221 (339)
.++++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+. ++ +.. .+ .|..+ .+++.+.+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAEE 82 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence 4678999987 8999999999999999 8999998877655442 21 211 12 23332 1223333333221
Q ss_pred --CCccEEEEcCCC
Q 019535 222 --GGADYCFECVGL 233 (339)
Q Consensus 222 --g~~d~v~d~~g~ 233 (339)
+++|++|++.|.
T Consensus 83 ~~g~id~li~~ag~ 96 (260)
T PRK07063 83 AFGPLDVLVNNAGI 96 (260)
T ss_pred HhCCCcEEEECCCc
Confidence 379999998873
No 310
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.69 E-value=0.41 Score=42.68 Aligned_cols=60 Identities=23% Similarity=0.261 Sum_probs=45.7
Q ss_pred HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC---ChhHHHHHHhcCCceEEeCCC
Q 019535 146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGKRFGVTEFVNSKN 206 (339)
Q Consensus 146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~---~~~~~~~~~~~ga~~vi~~~~ 206 (339)
....+++|.+|+---+|++|.+.+.+|+.+|+ +++.+.. ++++.+.++.+|+.-++....
T Consensus 55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t~~~ 117 (300)
T COG0031 55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILTPGA 117 (300)
T ss_pred HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEcCCC
Confidence 44558889854443459999999999999999 5555543 578899999999987776653
No 311
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.68 E-value=0.098 Score=45.45 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=30.6
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 187 (339)
Q Consensus 153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~ 187 (339)
+.+|+|+|+|++|..+++.+...|..+++.++.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 46899999999999999999999998888877643
No 312
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.087 Score=47.76 Aligned_cols=79 Identities=18% Similarity=0.170 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc-----CCc-e--EEeCCCCCCccHHHHHHHhc-
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-E--FVNSKNCGDKSVSQIIIDMT- 220 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~-----ga~-~--vi~~~~~~~~~~~~~l~~~~- 220 (339)
.+.+++|.|+ +++|.++++.+...|+ +|+.++++.++.+.+. ++ +.. . .+|..+ .+...+.+.+..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~~ 89 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLRA 89 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence 3678999987 8999999998888999 9999999877654432 11 111 1 234333 122222332322
Q ss_pred -CCCccEEEEcCCC
Q 019535 221 -DGGADYCFECVGL 233 (339)
Q Consensus 221 -~g~~d~v~d~~g~ 233 (339)
.+++|++|+++|.
T Consensus 90 ~~~~iD~li~nAG~ 103 (313)
T PRK05854 90 EGRPIHLLINNAGV 103 (313)
T ss_pred hCCCccEEEECCcc
Confidence 2379999998763
No 313
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.66 E-value=0.27 Score=42.37 Aligned_cols=99 Identities=20% Similarity=0.224 Sum_probs=58.3
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-------------------HH----HHHHhcCC-ceEEeCCCCC
Q 019535 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KF----EIGKRFGV-TEFVNSKNCG 208 (339)
Q Consensus 153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-------------------~~----~~~~~~ga-~~vi~~~~~~ 208 (339)
..+|+|+|.|++|..++..+...|..+++.++.+.- |. +.++++.. ..+.....
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~-- 88 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE-- 88 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee--
Confidence 468999999999999999999999988888876431 11 11122221 12211111
Q ss_pred CccHH-HHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 209 DKSVS-QIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 209 ~~~~~-~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
.+. +.+.++....+|+|+||+.+...-..+.+.+...+-.++..+
T Consensus 89 --~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~ 134 (231)
T cd00755 89 --FLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSM 134 (231)
T ss_pred --ecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 111 223333334699999999987754445555555312344443
No 314
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.081 Score=46.08 Aligned_cols=79 Identities=24% Similarity=0.311 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~ 221 (339)
.+.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+.. .. .|..+ ...+.+.+.... .
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR--DAEVKALVEQTIAAY 82 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4678999987 8999999988888999 899999987664433 233422 22 23222 122222222221 1
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|++.|.
T Consensus 83 g~id~li~~ag~ 94 (253)
T PRK06172 83 GRLDYAFNNAGI 94 (253)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 315
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.091 Score=46.05 Aligned_cols=77 Identities=19% Similarity=0.265 Sum_probs=49.5
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--CC
Q 019535 154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GG 223 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~ 223 (339)
.++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +..+.. .+ .|..+ .+.+.+.+.+... ++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFGG 78 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 57999987 9999999999889999 899999887654433 223432 12 23222 1223333333221 36
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999998864
No 316
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.64 E-value=0.083 Score=47.06 Aligned_cols=68 Identities=19% Similarity=0.282 Sum_probs=50.0
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 234 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~ 234 (339)
+|.|+|.|.+|...+..++..|. +|++++++++..+.+.+.|..... . .+. +.+ ...|+||-|++..
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~-----~~aDlVilavp~~ 68 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL-----KDCDLVILALPIG 68 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh-----cCCCEEEEcCCHH
Confidence 58899999999988888888898 899999999888888777642111 1 111 111 2579999999865
Q ss_pred H
Q 019535 235 S 235 (339)
Q Consensus 235 ~ 235 (339)
.
T Consensus 69 ~ 69 (279)
T PRK07417 69 L 69 (279)
T ss_pred H
Confidence 5
No 317
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.053 Score=46.80 Aligned_cols=81 Identities=22% Similarity=0.250 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC-c---eEEeCCCC---CCccHHHHHHHh
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV-T---EFVNSKNC---GDKSVSQIIIDM 219 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga-~---~vi~~~~~---~~~~~~~~l~~~ 219 (339)
.+.+++|.|+ |.+|...++.+...|+ +|+.+++++++.+.+. +.+. . ..+|..+. ....+.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 3578999987 8999999998888999 8999999887655442 2221 1 11232210 011223334443
Q ss_pred cCCCccEEEEcCCC
Q 019535 220 TDGGADYCFECVGL 233 (339)
Q Consensus 220 ~~g~~d~v~d~~g~ 233 (339)
..+.+|++|+++|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33478999998873
No 318
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.091 Score=45.59 Aligned_cols=79 Identities=25% Similarity=0.263 Sum_probs=49.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-e--EEeCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-E--FVNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~--vi~~~~~~~~~~~~~l~~~~--~ 221 (339)
.+.++||.|+ |.+|...++.+...|+ +|+.++++++..+.+. ..+.. . ..|..+ .+.+.+.+.+.. .
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4578999987 9999999998888999 8999998876543332 12211 1 233332 122222222221 1
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|+++|.
T Consensus 82 ~~id~vi~~ag~ 93 (250)
T PRK07774 82 GGIDYLVNNAAI 93 (250)
T ss_pred CCCCEEEECCCC
Confidence 368999998873
No 319
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.086 Score=45.88 Aligned_cols=77 Identities=17% Similarity=0.197 Sum_probs=49.7
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eEE--eCCCCCCccHHHHHHHhcC--C
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD--G 222 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~vi--~~~~~~~~~~~~~l~~~~~--g 222 (339)
+.++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ .+.. ..+ |..+ ...+.+.+.+... +
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRERHG 84 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 568999987 8999999999999999 99999988766544322 2321 222 3322 1223223333221 3
Q ss_pred CccEEEEcCC
Q 019535 223 GADYCFECVG 232 (339)
Q Consensus 223 ~~d~v~d~~g 232 (339)
.+|+++++.+
T Consensus 85 ~id~li~~ag 94 (252)
T PRK07035 85 RLDILVNNAA 94 (252)
T ss_pred CCCEEEECCC
Confidence 6899998887
No 320
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.63 E-value=0.12 Score=47.28 Aligned_cols=35 Identities=29% Similarity=0.321 Sum_probs=31.0
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 187 (339)
Q Consensus 153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~ 187 (339)
..+|+|+|+|++|..+++.+...|..++..++.+.
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 46799999999999999999999998888888763
No 321
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.63 E-value=0.11 Score=43.42 Aligned_cols=76 Identities=26% Similarity=0.300 Sum_probs=49.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c----CCce-EEeCCCCCCccHHHHHHHhcCCCc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVTE-FVNSKNCGDKSVSQIIIDMTDGGA 224 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~----ga~~-vi~~~~~~~~~~~~~l~~~~~g~~ 224 (339)
.+.+++|+|+ |.+|+.++..+...|+ +|+.+.++.++.+.+.+ + +... ..+..+ .+++.+.+ .++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~-----~~~ 98 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI-----KGA 98 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH-----hcC
Confidence 5678999986 9999999888888898 89999998877655432 2 2221 122222 01222222 258
Q ss_pred cEEEEcCCCHH
Q 019535 225 DYCFECVGLAS 235 (339)
Q Consensus 225 d~v~d~~g~~~ 235 (339)
|+||.+++...
T Consensus 99 diVi~at~~g~ 109 (194)
T cd01078 99 DVVFAAGAAGV 109 (194)
T ss_pred CEEEECCCCCc
Confidence 99999887655
No 322
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.61 E-value=0.11 Score=44.76 Aligned_cols=78 Identities=15% Similarity=0.112 Sum_probs=50.6
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HHHHHhcCCce-EEeCCCCCCccHHHHHHHhcC--CCccEE
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC 227 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-~~~~~~~ga~~-vi~~~~~~~~~~~~~l~~~~~--g~~d~v 227 (339)
+.++||.|+ |.+|..+++.+...|+ +|+.+++++++ .+.++..++.. ..|..+ .+.+.+.+.+... +++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence 467999987 8999999999888999 89999887643 33344455322 233332 2333333333322 369999
Q ss_pred EEcCCC
Q 019535 228 FECVGL 233 (339)
Q Consensus 228 ~d~~g~ 233 (339)
+++.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998874
No 323
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.61 E-value=0.22 Score=43.92 Aligned_cols=102 Identities=19% Similarity=0.267 Sum_probs=66.7
Q ss_pred HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHhcC-------Cc--eEEeCCCCCCccHHHH
Q 019535 146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFG-------VT--EFVNSKNCGDKSVSQI 215 (339)
Q Consensus 146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~~g-------a~--~vi~~~~~~~~~~~~~ 215 (339)
+..++.++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++.. .. .++..+. .++
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~---~~l--- 139 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA---TDL--- 139 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc---ccC---
Confidence 345677899999998864 6677778877653 28999999999888875421 11 1221111 110
Q ss_pred HHHhcCCCccEEEEcCC------CHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 216 IIDMTDGGADYCFECVG------LASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 216 l~~~~~g~~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
.+.++.||.|+-..+ -...++++.+.|+++ |+++.+...
T Consensus 140 --p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~ 184 (261)
T PLN02233 140 --PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFN 184 (261)
T ss_pred --CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECC
Confidence 111236999975322 234588999999998 999888654
No 324
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.096 Score=45.81 Aligned_cols=78 Identities=18% Similarity=0.193 Sum_probs=50.1
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCC---ceE--EeCCCCCCccHHHHHHHhcC--CC
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV---TEF--VNSKNCGDKSVSQIIIDMTD--GG 223 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga---~~v--i~~~~~~~~~~~~~l~~~~~--g~ 223 (339)
+.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ +.. ... .|..+ .+.+.+.+.+... +.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence 358999987 8999999988888899 89999988777655432 211 112 23332 1233333333222 36
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|++++++|.
T Consensus 79 id~lv~~ag~ 88 (257)
T PRK07024 79 PDVVIANAGI 88 (257)
T ss_pred CCEEEECCCc
Confidence 8999998763
No 325
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.60 E-value=0.083 Score=46.41 Aligned_cols=78 Identities=24% Similarity=0.284 Sum_probs=48.1
Q ss_pred CCCEEEEEcc-C--HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCceE--EeCCCCCCccHHHHHHHhcC-
Q 019535 152 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEF--VNSKNCGDKSVSQIIIDMTD- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G--~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~v--i~~~~~~~~~~~~~l~~~~~- 221 (339)
.++++||.|+ + ++|.+.++.+...|+ +|+.+.++++..+.++ +.|.... .|..+ .+...+.+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~ 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence 4678899987 4 799999988888999 8888877642222222 2343222 34443 2333333333322
Q ss_pred -CCccEEEEcCC
Q 019535 222 -GGADYCFECVG 232 (339)
Q Consensus 222 -g~~d~v~d~~g 232 (339)
+.+|++++++|
T Consensus 84 ~g~iDilVnnag 95 (260)
T PRK06603 84 WGSFDFLLHGMA 95 (260)
T ss_pred cCCccEEEEccc
Confidence 37999998776
No 326
>PRK06194 hypothetical protein; Provisional
Probab=95.60 E-value=0.09 Score=46.78 Aligned_cols=78 Identities=22% Similarity=0.284 Sum_probs=49.3
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-h---cCCc-eEE--eCCCCCCccHHHHHHHhc--CC
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---FGVT-EFV--NSKNCGDKSVSQIIIDMT--DG 222 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~---~ga~-~vi--~~~~~~~~~~~~~l~~~~--~g 222 (339)
+.++||.|+ |.+|..+++.+...|+ +|+.++++.++.+... + .+.. .++ |..+ .+.+.+.+.... .+
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD--AAQVEALADAALERFG 82 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 578999987 8999999998888999 8999998766544432 2 2322 122 2222 122222222221 13
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
++|++|+++|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999998875
No 327
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.60 E-value=0.13 Score=43.84 Aligned_cols=35 Identities=26% Similarity=0.253 Sum_probs=31.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~ 186 (339)
...+|+|+|+|++|...++.+...|..+++.++.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35689999999999999999999999889988876
No 328
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.59 E-value=0.091 Score=45.56 Aligned_cols=79 Identities=22% Similarity=0.196 Sum_probs=49.8
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC-ceEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV-TEFVNSKNCGDKSVSQIIIDMTD--GGA 224 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga-~~vi~~~~~~~~~~~~~l~~~~~--g~~ 224 (339)
+.++||.|+ |.+|..+++.+...|+ +|+.++++.++.+.+. ..+. ..++..+-...+.+.+.+.+... +++
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 678999987 8999999999988999 8999988876654432 2232 12222221011222233332221 368
Q ss_pred cEEEEcCC
Q 019535 225 DYCFECVG 232 (339)
Q Consensus 225 d~v~d~~g 232 (339)
|++|.+.+
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999887
No 329
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.25 Score=42.57 Aligned_cols=102 Identities=19% Similarity=0.172 Sum_probs=59.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh-HHH----HHHhcCCc-eEE--eCCCCCCccHHHHHHHhc--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFE----IGKRFGVT-EFV--NSKNCGDKSVSQIIIDMT-- 220 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~-~~~----~~~~~ga~-~vi--~~~~~~~~~~~~~l~~~~-- 220 (339)
++.++||+|+ |.+|...++.+...|+ +++.+.++.. ..+ .+++.+.. ..+ |..+ ...+.+.+++..
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD--AAAVTRLFDAAETA 80 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHH
Confidence 4678999987 9999999999999999 7777665432 222 22233422 222 2222 122223333221
Q ss_pred CCCccEEEEcCCCH-------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535 221 DGGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 221 ~g~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
.+++|++|.+.|.. ...+.+++.+... |+++.++..
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 141 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS 141 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence 13799999988741 0123444555565 888888753
No 330
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.088 Score=46.55 Aligned_cols=77 Identities=17% Similarity=0.177 Sum_probs=50.8
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-e--EEeCCCCCCccHHHHHHHhc--CCCccE
Q 019535 154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-E--FVNSKNCGDKSVSQIIIDMT--DGGADY 226 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~-~--vi~~~~~~~~~~~~~l~~~~--~g~~d~ 226 (339)
.++||.|+ |.+|...++.+...|+ +|+++.+++++.+.+++ .+.. . ..|..+ .+.+.+.+.+.. .+++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 57999987 9999999998888999 89999998877666544 2221 1 233333 122333333322 137899
Q ss_pred EEEcCCC
Q 019535 227 CFECVGL 233 (339)
Q Consensus 227 v~d~~g~ 233 (339)
+|+++|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9998874
No 331
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.59 E-value=0.12 Score=47.40 Aligned_cols=34 Identities=32% Similarity=0.362 Sum_probs=30.8
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186 (339)
Q Consensus 153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~ 186 (339)
..+|+|+|+|++|..+++.+...|..++..++.+
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4689999999999999999999999899999875
No 332
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.59 E-value=0.28 Score=40.79 Aligned_cols=100 Identities=17% Similarity=0.255 Sum_probs=64.3
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc--eEEeCCCCCCccHHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII 217 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~--~vi~~~~~~~~~~~~~l~ 217 (339)
+...+.+.++.+||-+|+|. |..++.+++.....+|++++.+++..+.+++ ++.. .++.. +...
T Consensus 23 ~~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~------d~~~--- 92 (187)
T PRK08287 23 ALSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG------EAPI--- 92 (187)
T ss_pred HHHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec------Cchh---
Confidence 34455677889999998864 6667777776533389999999988777653 3322 22221 1111
Q ss_pred HhcCCCccEEEEcCC---CHHHHHHHHHHhhcCCcEEEEec
Q 019535 218 DMTDGGADYCFECVG---LASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 218 ~~~~g~~d~v~d~~g---~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
...+.+|+|+.... -...++.+.+.|+++ |+++...
T Consensus 93 -~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~ 131 (187)
T PRK08287 93 -ELPGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF 131 (187)
T ss_pred -hcCcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence 11237999985432 133477889999997 9987753
No 333
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.11 Score=45.00 Aligned_cols=75 Identities=12% Similarity=0.077 Sum_probs=48.1
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC--Cc-eEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535 154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 229 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g--a~-~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d 229 (339)
.++||.|+ |.+|...+..+...|+ +|+.+++++++.+.+.+.+ .. ...|..+ .+++.+.+.+. ....|+++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~-~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQL-PFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhc-ccCCCEEEE
Confidence 46899987 9999998888888999 8999999888777665433 11 2234433 12333333332 224677766
Q ss_pred cCC
Q 019535 230 CVG 232 (339)
Q Consensus 230 ~~g 232 (339)
+.|
T Consensus 78 ~ag 80 (240)
T PRK06101 78 NAG 80 (240)
T ss_pred cCc
Confidence 554
No 334
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.58 E-value=0.3 Score=36.87 Aligned_cols=74 Identities=23% Similarity=0.254 Sum_probs=53.7
Q ss_pred EEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCHH
Q 019535 156 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 235 (339)
Q Consensus 156 VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~~ 235 (339)
|+|.|.|.+|...++.++..+. +|++++.++++.+.++..|.. ++..+. .-.+.+++..-..++.++-+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~----~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA----TDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T----TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc----hhhhHHhhcCccccCEEEEccCCHH
Confidence 5788999999999999999776 899999999999999888854 444333 2233344443237899998887655
No 335
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.58 E-value=0.21 Score=42.55 Aligned_cols=103 Identities=20% Similarity=0.236 Sum_probs=62.8
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCceEE------e-CCCCCCccHHHHHHHhc--
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFV------N-SKNCGDKSVSQIIIDMT-- 220 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~vi------~-~~~~~~~~~~~~l~~~~-- 220 (339)
.++.+||+.|+|. |.-++-+|. .|. .|++++.++...+.+ ++.+..... . +......-....+.++.
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 5678999999874 888888875 699 999999999988875 223321000 0 00000000000011111
Q ss_pred -CCCccEEEEcCCC--------HHHHHHHHHHhhcCCcEEEEeccC
Q 019535 221 -DGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 221 -~g~~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
.+.||.|+|+.-- ...++.+.++|+++ |++++++..
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~~ 154 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITLD 154 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEEE
Confidence 1368999996531 23478999999998 987777654
No 336
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.092 Score=47.32 Aligned_cols=79 Identities=18% Similarity=0.200 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hhc-----CCc-eE--EeCCCCCCccHHHHHHHhcC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF-----GVT-EF--VNSKNCGDKSVSQIIIDMTD 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~-----ga~-~v--i~~~~~~~~~~~~~l~~~~~ 221 (339)
.+.++||.|+ |.+|..+++.+...|+ +|+.++++.++.+.+ +.+ +.. .. +|..+ .+.+.+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~ 91 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS--LASVRAAADALRA 91 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHHHh
Confidence 4678999987 8999999998888899 899999887664432 111 111 12 23333 1223333333322
Q ss_pred --CCccEEEEcCCC
Q 019535 222 --GGADYCFECVGL 233 (339)
Q Consensus 222 --g~~d~v~d~~g~ 233 (339)
+++|++|+++|.
T Consensus 92 ~~~~iD~li~nAg~ 105 (306)
T PRK06197 92 AYPRIDLLINNAGV 105 (306)
T ss_pred hCCCCCEEEECCcc
Confidence 379999998873
No 337
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.57 E-value=0.087 Score=46.31 Aligned_cols=79 Identities=22% Similarity=0.352 Sum_probs=48.1
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceE--EeCCCCCCccHHHHHHHhcC-
Q 019535 152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEF--VNSKNCGDKSVSQIIIDMTD- 221 (339)
Q Consensus 152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~v--i~~~~~~~~~~~~~l~~~~~- 221 (339)
.++++||.|+ +++|.+.++.+...|+ +|+.+.+.....+.+++ .+.... .|..+ .+++.+.+.+...
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 81 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS--DDEINQVFADLGKH 81 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC--HHHHHHHHHHHHHH
Confidence 4678999983 5899999999889999 88887654332333322 342222 23333 2333333333322
Q ss_pred -CCccEEEEcCCC
Q 019535 222 -GGADYCFECVGL 233 (339)
Q Consensus 222 -g~~d~v~d~~g~ 233 (339)
+++|++++++|.
T Consensus 82 ~g~iD~lVnnAG~ 94 (261)
T PRK08690 82 WDGLDGLVHSIGF 94 (261)
T ss_pred hCCCcEEEECCcc
Confidence 379999998864
No 338
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.57 E-value=0.12 Score=46.38 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=31.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 187 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~ 187 (339)
.+++++|+|+|++|++++..+...|+++|+++.++.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 467899999999999999888899996799999885
No 339
>PRK09242 tropinone reductase; Provisional
Probab=95.56 E-value=0.1 Score=45.54 Aligned_cols=79 Identities=20% Similarity=0.152 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----c--CCc-eE--EeCCCCCCccHHHHHHHhc-
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F--GVT-EF--VNSKNCGDKSVSQIIIDMT- 220 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~--ga~-~v--i~~~~~~~~~~~~~l~~~~- 220 (339)
.++++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ . +.. .. .|..+ .+.+.+.+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 3678999987 8999999999999999 89999988776554422 1 221 11 23322 122222222221
Q ss_pred -CCCccEEEEcCCC
Q 019535 221 -DGGADYCFECVGL 233 (339)
Q Consensus 221 -~g~~d~v~d~~g~ 233 (339)
-+++|+++.+.|.
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 1379999999974
No 340
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.55 E-value=0.15 Score=43.83 Aligned_cols=84 Identities=19% Similarity=0.222 Sum_probs=59.4
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh--cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR--FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 232 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~--~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g 232 (339)
+++|+|+|.+|...++.+...|. .|++++.++++.+...+ ++. +++..+. .-.+.++++--..+|+++-+++
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~----t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA----TDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC----CCHHHHHhcCCCcCCEEEEeeC
Confidence 57899999999999999999999 89999999988777333 544 4443333 2234455543338999999998
Q ss_pred CHHHHHHHHHHhh
Q 019535 233 LASLVQEAYACCR 245 (339)
Q Consensus 233 ~~~~~~~~~~~l~ 245 (339)
+.. .+..+..++
T Consensus 76 ~d~-~N~i~~~la 87 (225)
T COG0569 76 NDE-VNSVLALLA 87 (225)
T ss_pred CCH-HHHHHHHHH
Confidence 865 444444444
No 341
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.1 Score=44.88 Aligned_cols=78 Identities=12% Similarity=0.083 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-- 221 (339)
.+.+++|.|+ +++|.+.+.-+...|+ +|+.+.+++++.+.+ ++.+.. .. .|..+ .+.+.+.+.+...
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS--QESIRHLFDAIEQQF 80 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 3678999987 7999999988888999 899999888776543 233432 12 23333 2333333332221
Q ss_pred C-CccEEEEcCC
Q 019535 222 G-GADYCFECVG 232 (339)
Q Consensus 222 g-~~d~v~d~~g 232 (339)
+ .+|++|++.|
T Consensus 81 g~~iD~li~nag 92 (227)
T PRK08862 81 NRAPDVLVNNWT 92 (227)
T ss_pred CCCCCEEEECCc
Confidence 3 7999999886
No 342
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.12 Score=45.04 Aligned_cols=73 Identities=19% Similarity=0.206 Sum_probs=46.5
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh-hHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 229 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~-~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d 229 (339)
++++||.|+ |.+|...++.+...|+ +|+++++++ +..+....... ....|..+ . +.+.+.. +++|++|+
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~---~---~~~~~~~-~~iDilVn 85 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDESPNEWIKWECGK---E---ESLDKQL-ASLDVLIL 85 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhccCCCeEEEeeCCC---H---HHHHHhc-CCCCEEEE
Confidence 578999987 8999999999989999 899988775 22222111111 11233332 1 2233332 36999999
Q ss_pred cCCC
Q 019535 230 CVGL 233 (339)
Q Consensus 230 ~~g~ 233 (339)
++|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9874
No 343
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.54 E-value=0.14 Score=44.76 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=30.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~ 186 (339)
...+|+|+|+|++|..++..+...|..++..++.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35789999999999999999999999888888654
No 344
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.091 Score=46.56 Aligned_cols=77 Identities=16% Similarity=0.165 Sum_probs=50.1
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC---ceE--EeCCCCCCccHHHHHHHhcC-
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV---TEF--VNSKNCGDKSVSQIIIDMTD- 221 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga---~~v--i~~~~~~~~~~~~~l~~~~~- 221 (339)
+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+.. .+. ..+ .|..+ .+.+.+ +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence 467899987 8999999998888899 89999988766544422 221 122 23333 223333 433322
Q ss_pred -CCccEEEEcCCC
Q 019535 222 -GGADYCFECVGL 233 (339)
Q Consensus 222 -g~~d~v~d~~g~ 233 (339)
+++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 378999998864
No 345
>PRK04266 fibrillarin; Provisional
Probab=95.53 E-value=0.17 Score=43.47 Aligned_cols=102 Identities=13% Similarity=0.147 Sum_probs=62.7
Q ss_pred HhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCceEEeCCCCCCccHHHHHHHhcC
Q 019535 146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTD 221 (339)
Q Consensus 146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~~vi~~~~~~~~~~~~~l~~~~~ 221 (339)
+...++++++||-+|+|+ |..+..+++..+..+|++++.+++..+.+.+. .....+..+. .+. .....+ .
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~---~~~-~~~~~l-~ 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA---RKP-ERYAHV-V 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC---CCc-chhhhc-c
Confidence 357889999999998763 55666677766533899999999877654322 1112222121 110 000111 1
Q ss_pred CCccEEEEcCCCH----HHHHHHHHHhhcCCcEEEEe
Q 019535 222 GGADYCFECVGLA----SLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 222 g~~d~v~d~~g~~----~~~~~~~~~l~~~~G~~v~~ 254 (339)
+.+|+++.-...+ ..++.+.+.|+++ |+++..
T Consensus 140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred ccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 2599999544432 2367888899998 999884
No 346
>PRK08589 short chain dehydrogenase; Validated
Probab=95.53 E-value=0.089 Score=46.51 Aligned_cols=79 Identities=24% Similarity=0.294 Sum_probs=49.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---cCCc---eEEeCCCCCCccHHHHHHHhc--CC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT---EFVNSKNCGDKSVSQIIIDMT--DG 222 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---~ga~---~vi~~~~~~~~~~~~~l~~~~--~g 222 (339)
.+.++||.|+ +.+|.+.++.+...|+ +|+.++++++..+.+++ .+.. ...|..+ .+.+.+.+.+.. .+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence 4678999987 8999999998888999 89999987332222322 2321 2234333 122333333322 13
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
++|++|++.|.
T Consensus 82 ~id~li~~Ag~ 92 (272)
T PRK08589 82 RVDVLFNNAGV 92 (272)
T ss_pred CcCEEEECCCC
Confidence 68999998763
No 347
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.11 Score=44.97 Aligned_cols=77 Identities=17% Similarity=0.273 Sum_probs=49.7
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----c--CCc-eE--EeCCCCCCccHHHHHHHhc--
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F--GVT-EF--VNSKNCGDKSVSQIIIDMT-- 220 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~--ga~-~v--i~~~~~~~~~~~~~l~~~~-- 220 (339)
+.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+.. . +.. .+ .|..+ .+.+.+.+.+..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 467999987 9999999888888898 89999988876654432 1 211 22 23333 223333333322
Q ss_pred CCCccEEEEcCC
Q 019535 221 DGGADYCFECVG 232 (339)
Q Consensus 221 ~g~~d~v~d~~g 232 (339)
.+++|++|.+.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 237999999886
No 348
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].
Probab=95.52 E-value=0.16 Score=42.11 Aligned_cols=70 Identities=23% Similarity=0.296 Sum_probs=56.2
Q ss_pred CCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEE
Q 019535 150 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF 228 (339)
Q Consensus 150 ~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~ 228 (339)
++++.+||-+|+|. |.+...|....++ ..++++.++++...+.+.|.. |+. .++.+.+....++.||+||
T Consensus 11 I~pgsrVLDLGCGd-G~LL~~L~~~k~v-~g~GvEid~~~v~~cv~rGv~-Viq------~Dld~gL~~f~d~sFD~VI 80 (193)
T PF07021_consen 11 IEPGSRVLDLGCGD-GELLAYLKDEKQV-DGYGVEIDPDNVAACVARGVS-VIQ------GDLDEGLADFPDQSFDYVI 80 (193)
T ss_pred cCCCCEEEecCCCc-hHHHHHHHHhcCC-eEEEEecCHHHHHHHHHcCCC-EEE------CCHHHhHhhCCCCCccEEe
Confidence 68899999999974 7777777777888 999999999998888888865 443 4566666666666999998
No 349
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=95.52 E-value=0.16 Score=45.56 Aligned_cols=71 Identities=21% Similarity=0.190 Sum_probs=51.0
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 234 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~ 234 (339)
+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||.|++..
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDivi~~vp~~ 66 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVTE-----QADVIFTMVPDS 66 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence 37889999999988888888899 89999999998888877765211 12222222 368888888875
Q ss_pred HHHHH
Q 019535 235 SLVQE 239 (339)
Q Consensus 235 ~~~~~ 239 (339)
...+.
T Consensus 67 ~~~~~ 71 (291)
T TIGR01505 67 PQVEE 71 (291)
T ss_pred HHHHH
Confidence 43443
No 350
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.51 E-value=0.16 Score=45.06 Aligned_cols=95 Identities=20% Similarity=0.268 Sum_probs=64.6
Q ss_pred ccccchhhhhhHHHHHhcCC-CCCCEEEEEccC-HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCC
Q 019535 131 CLLSCGVSTGVGAAWRTANV-EVGSTVVIFGLG-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 208 (339)
Q Consensus 131 a~l~~~~~ta~~al~~~~~~-~~~~~VLI~G~G-~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~ 208 (339)
..+||.....+. +++..++ -.|.+++|+|.| .+|.-++.++...|+ .|+.+.+..
T Consensus 136 ~~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t--------------------- 192 (286)
T PRK14175 136 TFVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS--------------------- 192 (286)
T ss_pred CCCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------
Confidence 345654333333 4444443 368999999986 499999999999999 888776421
Q ss_pred CccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 209 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 209 ~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
.++.+.++ .+|+||.++|.+..+.. +.++++ -.++++|..
T Consensus 193 -~~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 193 -KDMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred -hhHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 12333332 37999999999864544 457886 788888874
No 351
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.50 E-value=0.082 Score=46.26 Aligned_cols=78 Identities=26% Similarity=0.280 Sum_probs=49.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---cCCc---eEEeCCCCCCccHHHHHHHhcC--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT---EFVNSKNCGDKSVSQIIIDMTD--G 222 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---~ga~---~vi~~~~~~~~~~~~~l~~~~~--g 222 (339)
.+.++||.|+ |.+|.+.++.+...|+ +|+.+++++...+..++ .+.. ...|..+ .+...+.+.+... +
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence 3678999987 8999999999988999 89999887543333322 3322 1234333 1223333333222 3
Q ss_pred CccEEEEcCC
Q 019535 223 GADYCFECVG 232 (339)
Q Consensus 223 ~~d~v~d~~g 232 (339)
++|++++++|
T Consensus 84 ~id~lv~nAg 93 (260)
T PRK12823 84 RIDVLINNVG 93 (260)
T ss_pred CCeEEEECCc
Confidence 7999999886
No 352
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.50 E-value=0.1 Score=43.20 Aligned_cols=94 Identities=14% Similarity=0.145 Sum_probs=58.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCceEEeCCCCCCccHHHHHHHhcCCCccEE
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC 227 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v 227 (339)
.+.+||-+|+|. |..++.+++.....+|++++.+++..+.++ +.+...+ .... .+..+ + ...+.+|+|
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~---~d~~~-~--~~~~~fD~I 113 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVN---GRAED-F--QHEEQFDVI 113 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEe---cchhh-c--cccCCccEE
Confidence 378999998763 666666666554338999999988776654 3453321 1111 22222 1 112389999
Q ss_pred EEcC-CC-HHHHHHHHHHhhcCCcEEEEe
Q 019535 228 FECV-GL-ASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 228 ~d~~-g~-~~~~~~~~~~l~~~~G~~v~~ 254 (339)
+-.. .. +..++.+.+.|+++ |+++..
T Consensus 114 ~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 114 TSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred EehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 8432 22 34467788999997 998876
No 353
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.50 E-value=0.18 Score=46.11 Aligned_cols=87 Identities=23% Similarity=0.284 Sum_probs=54.9
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 231 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~ 231 (339)
.+++|.|+|.|.+|...++.++..|+ +|++.+++++.. .....+... .++.+.+. ..|+|+-+.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~---------~~l~ell~-----~aDiV~l~l 212 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY---------RPLEELLR-----ESDFVSLHV 212 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe---------cCHHHHHh-----hCCEEEEeC
Confidence 57899999999999999999999999 899998875433 223333211 12222222 257777666
Q ss_pred CCHHH-----HHHHHHHhhcCCcEEEEec
Q 019535 232 GLASL-----VQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 232 g~~~~-----~~~~~~~l~~~~G~~v~~g 255 (339)
+.... -...+..++++ ..+|.++
T Consensus 213 P~t~~T~~~i~~~~~~~mk~g-a~lIN~a 240 (333)
T PRK13243 213 PLTKETYHMINEERLKLMKPT-AILVNTA 240 (333)
T ss_pred CCChHHhhccCHHHHhcCCCC-eEEEECc
Confidence 53221 12445666665 5555554
No 354
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.48 E-value=0.079 Score=53.24 Aligned_cols=76 Identities=28% Similarity=0.294 Sum_probs=51.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------HHHHHHhcCCceEEeCCCCCCc
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGDK 210 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~---------------------~~~~~~~~ga~~vi~~~~~~~~ 210 (339)
.+.+|+|+|+|+.|+.++..++..|+ +|++++..+. ..+.++++|.+...+..-....
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI 404 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence 57899999999999999999999999 8988876532 3455666776544332210001
Q ss_pred cHHHHHHHhcCCCccEEEEcCCC
Q 019535 211 SVSQIIIDMTDGGADYCFECVGL 233 (339)
Q Consensus 211 ~~~~~l~~~~~g~~d~v~d~~g~ 233 (339)
.+ +.+. ..+|.||.++|.
T Consensus 405 ~~-~~~~----~~~DavilAtGa 422 (654)
T PRK12769 405 SL-ESLL----EDYDAVFVGVGT 422 (654)
T ss_pred CH-HHHH----hcCCEEEEeCCC
Confidence 11 1111 268999998885
No 355
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.47 E-value=0.093 Score=46.33 Aligned_cols=106 Identities=16% Similarity=0.229 Sum_probs=68.5
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCC
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDG 222 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g 222 (339)
+....++.++.+||-+|+|. |..+..+++..++ +|++++.+++..+.+++... ..-+.... .++.+ .....+
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~---~D~~~--~~~~~~ 116 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA---NDILK--KDFPEN 116 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE---CCccc--CCCCCC
Confidence 45667888999999999863 5666777777788 99999999988888766321 11111111 11110 011123
Q ss_pred CccEEEE--cC---C---CHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 223 GADYCFE--CV---G---LASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 223 ~~d~v~d--~~---g---~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
.||+|+. +. + -...++.+.+.|+|+ |+++.....
T Consensus 117 ~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~ 158 (263)
T PTZ00098 117 TFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC 158 (263)
T ss_pred CeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence 7999985 21 1 134578889999998 999887643
No 356
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.46 E-value=0.11 Score=46.09 Aligned_cols=78 Identities=27% Similarity=0.277 Sum_probs=49.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-- 221 (339)
.+.+++|.|+ |.+|++.++.+...|+ +|+.+++++++.+.+ +..+.. .. .|..+ ...+.+.+.+...
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD--KESLEQARQQILEDF 85 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 3678999987 8999999999989999 899999877654433 222322 12 22222 1223333332221
Q ss_pred CCccEEEEcCC
Q 019535 222 GGADYCFECVG 232 (339)
Q Consensus 222 g~~d~v~d~~g 232 (339)
+++|++|+++|
T Consensus 86 g~id~li~~ag 96 (278)
T PRK08277 86 GPCDILINGAG 96 (278)
T ss_pred CCCCEEEECCC
Confidence 37999999887
No 357
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.46 E-value=0.15 Score=44.41 Aligned_cols=79 Identities=23% Similarity=0.334 Sum_probs=49.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH--HHHHHhcCCc-e--EEeCCCCCCccHHHHHHHhc--CCC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVT-E--FVNSKNCGDKSVSQIIIDMT--DGG 223 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~--~~~~~~~ga~-~--vi~~~~~~~~~~~~~l~~~~--~g~ 223 (339)
.++++||.|+ +++|.++++.+...|+ +|+.+.++... .+.++..+.. . ..|..+ .+++.+.+.+.. -++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence 4678999987 8999999999999999 88888765321 2233444432 1 234333 223333333322 237
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|+++++.|.
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 358
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.45 E-value=0.1 Score=46.29 Aligned_cols=93 Identities=16% Similarity=0.116 Sum_probs=59.5
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hhc---CCceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTEFVNSKNCGDKSVSQIIIDMTDGGADY 226 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~---ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~ 226 (339)
..+.+++|+|+|++|.+.+..+...|+ +|+++.+++++.+.+ +.+ +........ + .....+|+
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~--------~----~~~~~~Di 181 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD--------E----LPLHRVDL 181 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh--------h----hcccCccE
Confidence 457789999999999999988888898 899999987775544 333 221222111 1 11125899
Q ss_pred EEEcCCCHHH--H---HHHHHHhhcCCcEEEEeccC
Q 019535 227 CFECVGLASL--V---QEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 227 v~d~~g~~~~--~---~~~~~~l~~~~G~~v~~g~~ 257 (339)
||+|++.... . ......++++ ..++++...
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y~ 216 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVYN 216 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEeccC
Confidence 9999986310 1 1123456775 677777554
No 359
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.43 E-value=0.098 Score=45.71 Aligned_cols=78 Identities=21% Similarity=0.243 Sum_probs=48.9
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-h----cCC--ceEE--eCCCCCCccHHHHHHHhc--
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R----FGV--TEFV--NSKNCGDKSVSQIIIDMT-- 220 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~----~ga--~~vi--~~~~~~~~~~~~~l~~~~-- 220 (339)
++++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+. + .+. ...+ |..+ .+.+...+.+..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 78 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS--EQSVLALSRGVDEI 78 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC--HHHHHHHHHHHHHH
Confidence 468999987 8999999999888999 8999998876544332 1 221 1222 3222 122222222221
Q ss_pred CCCccEEEEcCCC
Q 019535 221 DGGADYCFECVGL 233 (339)
Q Consensus 221 ~g~~d~v~d~~g~ 233 (339)
-+++|+++++.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (259)
T PRK12384 79 FGRVDLLVYNAGI 91 (259)
T ss_pred cCCCCEEEECCCc
Confidence 1478999998873
No 360
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=95.42 E-value=0.34 Score=40.90 Aligned_cols=98 Identities=17% Similarity=0.215 Sum_probs=64.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhc-CCCccE
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT-DGGADY 226 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~-~g~~d~ 226 (339)
++.+||-+|+|. |..+..+++.....++++++.+++..+.+++ .+...+ .... .+..+.+.... .+.+|.
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v-~~~~---~d~~~~l~~~~~~~~~D~ 114 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNL-RLLC---GDAVEVLLDMFPDGSLDR 114 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCE-EEEe---cCHHHHHHHHcCccccce
Confidence 577899999874 7778888877643489999999998887754 232222 1111 23323333323 337999
Q ss_pred EEEcCC--------------CHHHHHHHHHHhhcCCcEEEEec
Q 019535 227 CFECVG--------------LASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 227 v~d~~g--------------~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
|+-... ....++.+.+.|+++ |.++...
T Consensus 115 V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 115 IYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred EEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 975332 234588999999997 9988763
No 361
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.42 E-value=0.12 Score=45.94 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=64.2
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChh---HHHHH-HhcCCce--EEeCCCCCCccHHHHHHHhcC-
Q 019535 152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIG-KRFGVTE--FVNSKNCGDKSVSQIIIDMTD- 221 (339)
Q Consensus 152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~~---~~~~~-~~~ga~~--vi~~~~~~~~~~~~~l~~~~~- 221 (339)
.++++||.|+ +++|+++++.+...|+ +|+.+.++.+ +.+.+ ++++... ..|..+ .+.+.+.+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 3678999986 4899999999888999 8988887743 22222 3344322 234443 2233333333322
Q ss_pred -CCccEEEEcCCCH--------------H---------------HHHHHHHHhhcCCcEEEEeccC
Q 019535 222 -GGADYCFECVGLA--------------S---------------LVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 222 -g~~d~v~d~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+.+|++++++|.. . ..+..+..+..+ |+++.++..
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 4799999988731 0 234556667776 899888754
No 362
>PRK08264 short chain dehydrogenase; Validated
Probab=95.41 E-value=0.092 Score=45.22 Aligned_cols=75 Identities=16% Similarity=0.197 Sum_probs=48.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eE--EeCCCCCCccHHHHHHHhcCCCccEE
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTDGGADYC 227 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~g~~d~v 227 (339)
.+.++||+|+ |.+|..+++.+...|+++|+.++++.++.+. .+.. .+ .|..+ .+-.+.+.+.. +.+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~---~~~~~~~~~~~-~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD---PASVAAAAEAA-SDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC---HHHHHHHHHhc-CCCCEE
Confidence 4578999986 9999999999989998678888887665443 3221 22 23322 22222222221 268999
Q ss_pred EEcCCC
Q 019535 228 FECVGL 233 (339)
Q Consensus 228 ~d~~g~ 233 (339)
|.+.|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 998876
No 363
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.049 Score=48.00 Aligned_cols=76 Identities=22% Similarity=0.288 Sum_probs=50.0
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhc--CCCccEEE
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGGADYCF 228 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~--~g~~d~v~ 228 (339)
+.+++|.|+ |.+|...++.+...|+ +|+++++++++.+... +.. ...|..+ .+.+.+.+.... .+.+|++|
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD--DASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEEE
Confidence 467999987 9999999998888999 8999998765543221 222 2234433 233333333322 23789999
Q ss_pred EcCCC
Q 019535 229 ECVGL 233 (339)
Q Consensus 229 d~~g~ 233 (339)
++.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99884
No 364
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.12 Score=45.79 Aligned_cols=78 Identities=17% Similarity=0.135 Sum_probs=50.7
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCC-ceE--EeCCCCCCccHHHHHHHhc--CCCcc
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV-TEF--VNSKNCGDKSVSQIIIDMT--DGGAD 225 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga-~~v--i~~~~~~~~~~~~~l~~~~--~g~~d 225 (339)
+.++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+.. ++. ..+ .|..+ .+.+.+.+.... -+++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD--RAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 457999987 9999999988888899 89999998877665543 221 122 23222 122323233221 13789
Q ss_pred EEEEcCCC
Q 019535 226 YCFECVGL 233 (339)
Q Consensus 226 ~v~d~~g~ 233 (339)
++|.+.|.
T Consensus 80 ~vi~~ag~ 87 (275)
T PRK08263 80 IVVNNAGY 87 (275)
T ss_pred EEEECCCC
Confidence 99999874
No 365
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.11 Score=45.45 Aligned_cols=77 Identities=23% Similarity=0.290 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----cCCc-eE--EeCCCCCCccHHHHHHHhcCC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVT-EF--VNSKNCGDKSVSQIIIDMTDG 222 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----~ga~-~v--i~~~~~~~~~~~~~l~~~~~g 222 (339)
.+.++||.|+ |++|...++.+...|+ +|+.+++++++.+.+.+ .+.. .. .|..+ .+.+.+.+.. . +
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~-~-g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS--PEAREQLAAE-A-G 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHH-h-C
Confidence 3678999987 8999999998888999 99999988776554322 1321 22 23222 1222222222 1 4
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
.+|++|++.|.
T Consensus 81 ~id~lv~~ag~ 91 (259)
T PRK06125 81 DIDILVNNAGA 91 (259)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 366
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.39 E-value=0.11 Score=45.34 Aligned_cols=78 Identities=17% Similarity=0.234 Sum_probs=48.9
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC--ceE--EeCCCCCCccHHHHHHHhcC--C
Q 019535 152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEF--VNSKNCGDKSVSQIIIDMTD--G 222 (339)
Q Consensus 152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga--~~v--i~~~~~~~~~~~~~l~~~~~--g 222 (339)
.++++||.|+ +++|.+.++.+...|+ +|+.+.++++..+.++++.. ... .|..+ .++..+.+.+... +
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g 82 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS--DESIERAFATIKERVG 82 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC--HHHHHHHHHHHHHHhC
Confidence 4678999986 3899999998888999 89988877443444444321 112 23332 2233333333222 4
Q ss_pred CccEEEEcCC
Q 019535 223 GADYCFECVG 232 (339)
Q Consensus 223 ~~d~v~d~~g 232 (339)
.+|++++++|
T Consensus 83 ~iD~lv~nAg 92 (252)
T PRK06079 83 KIDGIVHAIA 92 (252)
T ss_pred CCCEEEEccc
Confidence 7999999876
No 367
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.38 E-value=0.14 Score=44.54 Aligned_cols=79 Identities=27% Similarity=0.415 Sum_probs=50.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~ 221 (339)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ +..+.. .. .|..+ .+.+.+.+.+.. .
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH--KQEVEAAIEHIEKDI 84 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC--HHHHHHHHHHHHHhc
Confidence 4678999987 8999999999888999 899999887665433 222322 12 23332 122333232222 1
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|+++.+.|.
T Consensus 85 ~~id~vi~~ag~ 96 (254)
T PRK08085 85 GPIDVLINNAGI 96 (254)
T ss_pred CCCCEEEECCCc
Confidence 379999998874
No 368
>PLN02253 xanthoxin dehydrogenase
Probab=95.37 E-value=0.1 Score=46.24 Aligned_cols=79 Identities=20% Similarity=0.222 Sum_probs=49.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCC---ce--EEeCCCCCCccHHHHHHHhcC--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV---TE--FVNSKNCGDKSVSQIIIDMTD--G 222 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga---~~--vi~~~~~~~~~~~~~l~~~~~--g 222 (339)
.+.++||.|+ |.+|.+.++.+...|+ +|++++++++..+.+ +.++. .. ..|..+ .+.+.+.+..... +
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 3678999987 8999999988888999 899998876654433 22321 11 233333 1223232332221 3
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
++|++|+++|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 79999998864
No 369
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.36 E-value=0.13 Score=44.82 Aligned_cols=78 Identities=26% Similarity=0.379 Sum_probs=51.0
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-eE--EeCCCCCCccHHHHHHHhc--CCCcc
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGAD 225 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~d 225 (339)
+.++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ ++.. .. .|..+ .+.+.+.+.+.. .+.+|
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR--QDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 578999987 9999999999999999 89999988877655433 3321 12 23222 122333333221 13789
Q ss_pred EEEEcCCC
Q 019535 226 YCFECVGL 233 (339)
Q Consensus 226 ~v~d~~g~ 233 (339)
+++.+.+.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998763
No 370
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.36 E-value=0.12 Score=47.05 Aligned_cols=78 Identities=21% Similarity=0.198 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcC---Cc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG---VT-EF--VNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~g---a~-~v--i~~~~~~~~~~~~~l~~~~--~ 221 (339)
.+.++||.|+ |.+|..+++.+...|+ +|+.++++.++.+.+ +++. .. .+ .|..+ ...+.+.+.+.. .
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 4678999987 8999999998888998 899999887765543 2231 11 11 23333 122222232221 2
Q ss_pred CCccEEEEcCC
Q 019535 222 GGADYCFECVG 232 (339)
Q Consensus 222 g~~d~v~d~~g 232 (339)
+++|++|+++|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 36999999887
No 371
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.19 Score=44.59 Aligned_cols=79 Identities=24% Similarity=0.286 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~ 221 (339)
.+.++||.|+ |.+|.+.++.+...|+ +|+.+++++++.+.+ +..+.. .. .|..+ .+++.+.+.+.. .
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRLL 81 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 8999999999999999 899888877655443 223432 11 23322 122322222221 1
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|++.|.
T Consensus 82 g~id~li~nAg~ 93 (275)
T PRK05876 82 GHVDVVFSNAGI 93 (275)
T ss_pred CCCCEEEECCCc
Confidence 368999998873
No 372
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.35 E-value=0.21 Score=45.63 Aligned_cols=89 Identities=17% Similarity=0.102 Sum_probs=63.2
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce-----------EEeCCCCCCccHHHHHHHhcCCC
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-----------FVNSKNCGDKSVSQIIIDMTDGG 223 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~-----------vi~~~~~~~~~~~~~l~~~~~g~ 223 (339)
+|.|+|+|.+|.+.+..+...|. +|.++.+++++.+.+++.+... +... .+..+.+ ..
T Consensus 6 ~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~-----~~~~e~~-----~~ 74 (328)
T PRK14618 6 RVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPT-----ADPEEAL-----AG 74 (328)
T ss_pred eEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEe-----CCHHHHH-----cC
Confidence 69999999999999999888898 8999999888777766532110 1111 1222222 25
Q ss_pred ccEEEEcCCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 224 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 224 ~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
.|+||-|+.... ++..++.++++ -.++.+..
T Consensus 75 aD~Vi~~v~~~~-~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 75 ADFAVVAVPSKA-LRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred CCEEEEECchHH-HHHHHHhcCcC-CEEEEEee
Confidence 899999999987 77888888885 55665543
No 373
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.34 E-value=0.13 Score=44.42 Aligned_cols=79 Identities=19% Similarity=0.268 Sum_probs=49.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhcC--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~-- 221 (339)
.+.++||.|+ |.+|...++.+...|+ +|+++++++++...+ +..+.. .++ |..+ .+.+.+.+.+...
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD--RAALKAAVAAGVEDF 81 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 3578999987 9999999988888899 899999886544332 223321 122 2222 1223333322221
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+.+|++|.+.+.
T Consensus 82 ~~~d~vi~~ag~ 93 (251)
T PRK12826 82 GRLDILVANAGI 93 (251)
T ss_pred CCCCEEEECCCC
Confidence 368999998754
No 374
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.077 Score=45.51 Aligned_cols=73 Identities=19% Similarity=0.241 Sum_probs=48.7
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-ceEEeCCCCCCccHHHHHHHhcCC-CccEEEE
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFE 229 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-~~vi~~~~~~~~~~~~~l~~~~~g-~~d~v~d 229 (339)
+.++||.|+ |.+|...++.+...|. +|+.+.+++++ .... ....|..+ .+.+.+.+.+.... ++|++|.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD--IEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEEE
Confidence 568999987 8999999999999999 89999887654 1111 12234333 23333334444333 7899999
Q ss_pred cCCC
Q 019535 230 CVGL 233 (339)
Q Consensus 230 ~~g~ 233 (339)
+.|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8874
No 375
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.30 E-value=0.22 Score=42.94 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=30.0
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186 (339)
Q Consensus 153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~ 186 (339)
..+|+|+|+|++|...+..+...|..+++.++.+
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 5789999999999999999999999888888543
No 376
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.30 E-value=0.13 Score=45.24 Aligned_cols=78 Identities=15% Similarity=0.214 Sum_probs=47.7
Q ss_pred CCCEEEEEccC---HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCceE--EeCCCCCCccHHHHHHHhcC-
Q 019535 152 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEF--VNSKNCGDKSVSQIIIDMTD- 221 (339)
Q Consensus 152 ~~~~VLI~G~G---~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~~v--i~~~~~~~~~~~~~l~~~~~- 221 (339)
.+.++||.|++ ++|.++++.+...|+ +|+.+.+++...+.+++ .+.... .|..+ .+++.+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 81 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE--DASIDAMFAELGKV 81 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC--HHHHHHHHHHHHhh
Confidence 46789999873 799999988888999 88888776322222322 232222 33333 2333333333322
Q ss_pred -CCccEEEEcCC
Q 019535 222 -GGADYCFECVG 232 (339)
Q Consensus 222 -g~~d~v~d~~g 232 (339)
+.+|++|+++|
T Consensus 82 ~g~iD~linnAg 93 (262)
T PRK07984 82 WPKFDGFVHSIG 93 (262)
T ss_pred cCCCCEEEECCc
Confidence 37999999887
No 377
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.29 E-value=0.073 Score=47.00 Aligned_cols=78 Identities=17% Similarity=0.223 Sum_probs=52.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHH----HHHHhcCC--ceEEeCCCCCCccHHH---HHHHhcC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF----EIGKRFGV--TEFVNSKNCGDKSVSQ---IIIDMTD 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~----~~~~~~ga--~~vi~~~~~~~~~~~~---~l~~~~~ 221 (339)
.|+.|||.|+ +++|++.++=...+|+ +++.++.+++.. +.+++.|. ..+.|-.+ .+++.. ++++..
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e~- 112 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKEV- 112 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHhc-
Confidence 5899999987 6999998887778888 888888876543 33344452 24455444 244433 333332
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
|.+|++++.+|-
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 279999998875
No 378
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.1 Score=45.47 Aligned_cols=75 Identities=17% Similarity=0.250 Sum_probs=48.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC--Cc-eEEeCCCCCCccHHHHHHHhc--CCCcc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VT-EFVNSKNCGDKSVSQIIIDMT--DGGAD 225 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g--a~-~vi~~~~~~~~~~~~~l~~~~--~g~~d 225 (339)
.++++||.|+ |.+|...++.+...|+ +|+.+++++++ +..+ .. ...|..+ .+.+.+.+.... -+.+|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 77 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLD 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 4688999987 8999999999988999 89999987654 1122 11 1223333 122333332221 13789
Q ss_pred EEEEcCCC
Q 019535 226 YCFECVGL 233 (339)
Q Consensus 226 ~v~d~~g~ 233 (339)
++|.+.|.
T Consensus 78 ~vi~~ag~ 85 (252)
T PRK07856 78 VLVNNAGG 85 (252)
T ss_pred EEEECCCC
Confidence 99998873
No 379
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.28 E-value=0.12 Score=45.70 Aligned_cols=78 Identities=19% Similarity=0.336 Sum_probs=48.2
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCCh---hHHHHH-HhcCCceE--EeCCCCCCccHHHHHHHhcC-
Q 019535 152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEIG-KRFGVTEF--VNSKNCGDKSVSQIIIDMTD- 221 (339)
Q Consensus 152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~~---~~~~~~-~~~ga~~v--i~~~~~~~~~~~~~l~~~~~- 221 (339)
.++++||.|+ +++|.+.++.+...|+ +|+.+.+++ ++.+.+ ++++.... .|..+ .+...+.+.+...
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 85 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD--EASIDAVFETLEKK 85 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC--HHHHHHHHHHHHHh
Confidence 4678999986 5899999999989999 888887653 222322 33453222 33332 2233333333322
Q ss_pred -CCccEEEEcCC
Q 019535 222 -GGADYCFECVG 232 (339)
Q Consensus 222 -g~~d~v~d~~g 232 (339)
+.+|++++++|
T Consensus 86 ~g~iD~lv~nAG 97 (272)
T PRK08159 86 WGKLDFVVHAIG 97 (272)
T ss_pred cCCCcEEEECCc
Confidence 37999999876
No 380
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.13 Score=45.00 Aligned_cols=79 Identities=24% Similarity=0.311 Sum_probs=49.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---cCCc-eE--EeCCCCCCccHHHHHHHhc--CC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EF--VNSKNCGDKSVSQIIIDMT--DG 222 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g 222 (339)
.+.++||.|+ |.+|...++.+...|+ +|+.++++.+..+.+++ .+.. .. .|..+ ..++.+.+.+.. .+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 4678999987 8999999999988999 89999887654333322 2322 12 22222 122222222221 13
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
.+|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (263)
T PRK08226 82 RIDILVNNAGV 92 (263)
T ss_pred CCCEEEECCCc
Confidence 78999998873
No 381
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.27 E-value=0.13 Score=44.68 Aligned_cols=78 Identities=21% Similarity=0.298 Sum_probs=50.3
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-e--EEeCCCCCCccHHHHHHHhc--CC
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-E--FVNSKNCGDKSVSQIIIDMT--DG 222 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~--vi~~~~~~~~~~~~~l~~~~--~g 222 (339)
+.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+. ..+.. . ..|..+ ...+.+.+.+.. .+
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD--EEAINAGIDYAVETFG 80 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 578999987 9999999998888899 8999999877654432 22322 1 223332 122223232221 13
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
++|++|.+++.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 79999998863
No 382
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=95.27 E-value=0.24 Score=44.50 Aligned_cols=71 Identities=17% Similarity=0.178 Sum_probs=50.4
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 234 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~ 234 (339)
+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|... . .++.+.+. ..|+||.|+..+
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~-~-------~~~~e~~~-----~~d~vi~~vp~~ 69 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAET-A-------STAKAVAE-----QCDVIITMLPNS 69 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCee-c-------CCHHHHHh-----cCCEEEEeCCCH
Confidence 68999999999988887778898 8999999988888777766421 1 12222221 378999888765
Q ss_pred HHHHH
Q 019535 235 SLVQE 239 (339)
Q Consensus 235 ~~~~~ 239 (339)
...+.
T Consensus 70 ~~~~~ 74 (296)
T PRK11559 70 PHVKE 74 (296)
T ss_pred HHHHH
Confidence 53443
No 383
>PRK07985 oxidoreductase; Provisional
Probab=95.26 E-value=0.31 Score=43.71 Aligned_cols=102 Identities=21% Similarity=0.130 Sum_probs=60.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh--hHHHHH----HhcCCc---eEEeCCCCCCccHHHHHHHhcC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFEIG----KRFGVT---EFVNSKNCGDKSVSQIIIDMTD 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~--~~~~~~----~~~ga~---~vi~~~~~~~~~~~~~l~~~~~ 221 (339)
.+.++||.|+ |.+|.+.++.+...|+ +|+.+.++. +..+.+ +..+.. ...|..+ .+.+.+.+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 124 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAHK 124 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence 4678999987 8999999999989999 888876542 222222 223422 1223333 1223333333222
Q ss_pred --CCccEEEEcCCCH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 019535 222 --GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 222 --g~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
+++|+++.+.|.. ...+.++..+..+ |++|.++..
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 3789999887631 1233445555666 899888753
No 384
>PRK06849 hypothetical protein; Provisional
Probab=95.26 E-value=1 Score=42.18 Aligned_cols=93 Identities=16% Similarity=0.111 Sum_probs=58.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc--eEEeCCCCCCccHHHHHHHhcCC-CccEE
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMTDG-GADYC 227 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~--~vi~~~~~~~~~~~~~l~~~~~g-~~d~v 227 (339)
...+|||+|+ .+.|+..++.++..|. +|++++..+.......+ .++ ..+.......+.+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 3578999998 5789999999999999 99999887644332211 122 22321221124567778777766 89999
Q ss_pred EEcCCCHHHHHHHHHHhhc
Q 019535 228 FECVGLASLVQEAYACCRK 246 (339)
Q Consensus 228 ~d~~g~~~~~~~~~~~l~~ 246 (339)
|-+...........+.+..
T Consensus 81 IP~~e~~~~~a~~~~~l~~ 99 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSA 99 (389)
T ss_pred EECChHHHhHHhhhhhhcC
Confidence 9776543223333444544
No 385
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.25 E-value=0.18 Score=41.32 Aligned_cols=94 Identities=14% Similarity=0.244 Sum_probs=60.8
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535 155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 233 (339)
Q Consensus 155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~ 233 (339)
+|.|+|+ |-+|...++=|...|. .|+++++++.+....+.. .++..+- -+.......+ .++|+||++.+.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~---~i~q~Di---fd~~~~a~~l--~g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV---TILQKDI---FDLTSLASDL--AGHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc---eeecccc---cChhhhHhhh--cCCceEEEeccC
Confidence 5889987 9999999999999999 999999999887553221 1221111 1111111111 279999998876
Q ss_pred H--H-------HHHHHHHHhhcC-CcEEEEeccC
Q 019535 234 A--S-------LVQEAYACCRKG-WGKTIVLGVD 257 (339)
Q Consensus 234 ~--~-------~~~~~~~~l~~~-~G~~v~~g~~ 257 (339)
. . ..+.++..++.. --|+..+|..
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 4 1 134466667662 2488888764
No 386
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.42 Score=42.75 Aligned_cols=79 Identities=20% Similarity=0.131 Sum_probs=47.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HHH----HHhcCCce-E--EeCCCCCCccHHHHHHHhc--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVTE-F--VNSKNCGDKSVSQIIIDMT-- 220 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-~~~----~~~~ga~~-v--i~~~~~~~~~~~~~l~~~~-- 220 (339)
.+.++||.|+ |.+|...++.+...|+ +|+.+.++.++ .+. ++..+... + .|..+ .+.+.+.+.+..
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~i~~~ 121 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD--EAFCKDAVEETVRE 121 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 4678999987 8999999988888999 88888776432 222 22234321 2 23222 122222222221
Q ss_pred CCCccEEEEcCCC
Q 019535 221 DGGADYCFECVGL 233 (339)
Q Consensus 221 ~g~~d~v~d~~g~ 233 (339)
.+++|++|.++|.
T Consensus 122 ~~~iD~lI~~Ag~ 134 (290)
T PRK06701 122 LGRLDILVNNAAF 134 (290)
T ss_pred cCCCCEEEECCcc
Confidence 1368999988764
No 387
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.24 E-value=0.3 Score=45.56 Aligned_cols=35 Identities=23% Similarity=0.246 Sum_probs=31.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~ 186 (339)
.+.+|+|+|+|++|..++..+...|..++..++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 46789999999999999999999999889998876
No 388
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.22 E-value=0.15 Score=46.21 Aligned_cols=88 Identities=17% Similarity=0.189 Sum_probs=55.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 231 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~ 231 (339)
.+.+|.|+|.|.+|+..++.++.+|+ +|++.++++++.. +..... .. .++.+.+. ..|+|+.+.
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~--~~---~~l~e~l~-----~aDvvv~~l 198 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA--GR---EELSAFLS-----QTRVLINLL 198 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec--cc---ccHHHHHh-----cCCEEEECC
Confidence 57899999999999999999999999 9999987543321 111111 01 22322222 367777776
Q ss_pred CCHHHH-----HHHHHHhhcCCcEEEEecc
Q 019535 232 GLASLV-----QEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 232 g~~~~~-----~~~~~~l~~~~G~~v~~g~ 256 (339)
+..... ...++.|+++ ..+|.+|.
T Consensus 199 Plt~~T~~li~~~~l~~mk~g-a~lIN~aR 227 (312)
T PRK15469 199 PNTPETVGIINQQLLEQLPDG-AYLLNLAR 227 (312)
T ss_pred CCCHHHHHHhHHHHHhcCCCC-cEEEECCC
Confidence 643222 2456667775 66666653
No 389
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]
Probab=95.21 E-value=0.15 Score=42.92 Aligned_cols=98 Identities=17% Similarity=0.099 Sum_probs=71.4
Q ss_pred HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCC-C
Q 019535 145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 223 (339)
Q Consensus 145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g-~ 223 (339)
+....+....+|.-+|+|+ |..+..|++...-..|.++++|++.++.+++...+--+.. . .++++... .
T Consensus 23 la~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~~-----a----Dl~~w~p~~~ 92 (257)
T COG4106 23 LARVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFEE-----A----DLRTWKPEQP 92 (257)
T ss_pred HhhCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCceec-----c----cHhhcCCCCc
Confidence 3344566778888889986 8899999999976699999999999999877654322211 1 24566666 7
Q ss_pred ccEEEEcCC------CHHHHHHHHHHhhcCCcEEEE
Q 019535 224 ADYCFECVG------LASLVQEAYACCRKGWGKTIV 253 (339)
Q Consensus 224 ~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~ 253 (339)
.|++|...- -+..+..++..|+++ |.+..
T Consensus 93 ~dllfaNAvlqWlpdH~~ll~rL~~~L~Pg-g~LAV 127 (257)
T COG4106 93 TDLLFANAVLQWLPDHPELLPRLVSQLAPG-GVLAV 127 (257)
T ss_pred cchhhhhhhhhhccccHHHHHHHHHhhCCC-ceEEE
Confidence 888884332 356689999999997 86644
No 390
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.20 E-value=0.33 Score=37.63 Aligned_cols=87 Identities=16% Similarity=0.210 Sum_probs=53.3
Q ss_pred EEEEcc-CHHHHHHHHHHHHcC--CCEEEEEcCChhH---HHHHHhcCCceEEeCCCCCCccHHHHH-------------
Q 019535 156 VVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEK---FEIGKRFGVTEFVNSKNCGDKSVSQII------------- 216 (339)
Q Consensus 156 VLI~G~-G~iG~~a~~la~~~G--~~~Vi~~~~~~~~---~~~~~~~ga~~vi~~~~~~~~~~~~~l------------- 216 (339)
|.|+|+ |.+|..++.+.+... + +|++..-...- .+.++++....+.-.++ ...+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~----~~~~~l~~~~~~~~~~~~v 75 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE----EAYEELKKALPSKGPGIEV 75 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH----HHHHHHHHHHHHTTSSSEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHHhhhcCCCCEE
Confidence 578897 999999999999997 6 67766543322 34446677766655443 222222
Q ss_pred -------HHhcCC-CccEEEEcCCCHHHHHHHHHHhhcC
Q 019535 217 -------IDMTDG-GADYCFECVGLASLVQEAYACCRKG 247 (339)
Q Consensus 217 -------~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~ 247 (339)
.++... .+|+++.++.+...+.-.+..+..+
T Consensus 76 ~~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g 114 (129)
T PF02670_consen 76 LSGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG 114 (129)
T ss_dssp EESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred EeChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence 233332 6788887776666677777777764
No 391
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.15 Score=44.57 Aligned_cols=78 Identities=19% Similarity=0.302 Sum_probs=49.6
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcC---Cc-eEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VT-EFVNSKNCGDKSVSQIIIDMTD--GGA 224 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~g---a~-~vi~~~~~~~~~~~~~l~~~~~--g~~ 224 (339)
+.++||.|+ |.+|...+..+...|+ +|+.+++++++.+.+. .+. +. ...|..+ .+.+...+.+... +++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 467999987 8999999988888899 8999998877655443 222 11 1233333 1222223332221 368
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (257)
T PRK07074 79 DVLVANAGA 87 (257)
T ss_pred CEEEECCCC
Confidence 999998874
No 392
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.18 E-value=0.18 Score=43.45 Aligned_cols=80 Identities=21% Similarity=0.294 Sum_probs=49.9
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGA 224 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~vi~~~~~~~~~~~~~l~~~~~--g~~ 224 (339)
+.+++|.|+ |.+|..++..+...|+ +|+.+++++++.+.+ +..+.. .++..+-.....+.+.+++... +++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 578999987 8999999988888999 899999887654433 223322 1222221011233333333221 378
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999998864
No 393
>PRK08328 hypothetical protein; Provisional
Probab=95.18 E-value=0.16 Score=43.87 Aligned_cols=34 Identities=29% Similarity=0.424 Sum_probs=30.3
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186 (339)
Q Consensus 153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~ 186 (339)
+.+|+|+|+|++|..++..+...|..++..++.+
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 5689999999999999999999999888888754
No 394
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=95.16 E-value=0.11 Score=40.31 Aligned_cols=79 Identities=20% Similarity=0.274 Sum_probs=49.1
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEc-CChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVD-VISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
.-+|-|+|+|.+|......++..|. .|..+. +++++.+.+.. ++...+.+..+ .. ..+|++|-+
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------------~~-~~aDlv~ia 75 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE------------IL-RDADLVFIA 75 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG------------GG-CC-SEEEE-
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc------------cc-ccCCEEEEE
Confidence 3578999999999999999999999 787774 45555555544 44444443322 11 258999999
Q ss_pred CCCHHHHHHHHHHhhc
Q 019535 231 VGLASLVQEAYACCRK 246 (339)
Q Consensus 231 ~g~~~~~~~~~~~l~~ 246 (339)
++... +...++.|..
T Consensus 76 vpDda-I~~va~~La~ 90 (127)
T PF10727_consen 76 VPDDA-IAEVAEQLAQ 90 (127)
T ss_dssp S-CCH-HHHHHHHHHC
T ss_pred echHH-HHHHHHHHHH
Confidence 99887 6666666664
No 395
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.15 E-value=0.53 Score=40.75 Aligned_cols=102 Identities=22% Similarity=0.201 Sum_probs=59.4
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC-hhHH----HHHHhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKF----EIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~-~~~~----~~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-- 221 (339)
+.++||.|+ |.+|...++.+...|+ +++.+.++ .+.. ..++..+.. .. .|..+ ...+...+.++..
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDRY 82 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHHc
Confidence 578999987 8999999988888999 77666543 2222 122333322 12 23332 1222222222211
Q ss_pred CCccEEEEcCCC----------H---------------HHHHHHHHHhhcCCcEEEEeccCC
Q 019535 222 GGADYCFECVGL----------A---------------SLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 222 g~~d~v~d~~g~----------~---------------~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
+++|++|.+.|. . ...+.+.+.+... |+++.++...
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 378999998873 1 0133445566675 8999887643
No 396
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.15 E-value=0.15 Score=44.32 Aligned_cols=76 Identities=16% Similarity=0.279 Sum_probs=50.3
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-e--EEeCCCCCCccHHHHHHHhcC--CCccEE
Q 019535 155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-E--FVNSKNCGDKSVSQIIIDMTD--GGADYC 227 (339)
Q Consensus 155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~-~--vi~~~~~~~~~~~~~l~~~~~--g~~d~v 227 (339)
+++|.|+ |.+|...++.+...|+ +|+++++++++.+.+.. ++.. . ..|..+ .+.+.+.+.+... +++|++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 5899987 9999999999989999 89999998877666543 3422 1 123333 1223333333222 379999
Q ss_pred EEcCCC
Q 019535 228 FECVGL 233 (339)
Q Consensus 228 ~d~~g~ 233 (339)
+.++|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 998764
No 397
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=95.14 E-value=0.25 Score=39.59 Aligned_cols=97 Identities=20% Similarity=0.268 Sum_probs=63.0
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCC---CCccHHHHHHHhcCC-CccEE
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC---GDKSVSQIIIDMTDG-GADYC 227 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~---~~~~~~~~l~~~~~g-~~d~v 227 (339)
..+|+|.|+ |.+|.++++.-|+.++ -|..++.++... -.+..+++.++. ..+...+++.+...+ ++|.|
T Consensus 3 agrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence 357999987 9999999999999999 888887664432 222334443320 012233455555666 99999
Q ss_pred EEcCCC--------------------------HHHHHHHHHHhhcCCcEEEEecc
Q 019535 228 FECVGL--------------------------ASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 228 ~d~~g~--------------------------~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
|...|+ ......+-..|.++ |-+-+.|.
T Consensus 77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGA 130 (236)
T KOG4022|consen 77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGA 130 (236)
T ss_pred EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeeccc
Confidence 987765 01133445678887 88877764
No 398
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.17 Score=44.15 Aligned_cols=79 Identities=15% Similarity=0.223 Sum_probs=48.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HH----HHHhcCCc-eE--EeCCCCCCccHHHHHHHhc--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FE----IGKRFGVT-EF--VNSKNCGDKSVSQIIIDMT-- 220 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-~~----~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~-- 220 (339)
.+.++||.|+ +.+|.++++.+...|+ +|+.++++.++ .+ .++..+.. .. .|..+ .+.+.+.+.+..
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 83 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS--KADLRAAVARTEAE 83 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3678999987 8999999999999999 89888876432 12 22333422 12 23322 122333333322
Q ss_pred CCCccEEEEcCCC
Q 019535 221 DGGADYCFECVGL 233 (339)
Q Consensus 221 ~g~~d~v~d~~g~ 233 (339)
.+.+|++|++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (254)
T PRK06114 84 LGALTLAVNAAGI 96 (254)
T ss_pred cCCCCEEEECCCC
Confidence 2478999998874
No 399
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.12 E-value=0.17 Score=44.14 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=60.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc--CCceE-EeCCCCCCccHHHHHHHhcCCCccEE
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF--GVTEF-VNSKNCGDKSVSQIIIDMTDGGADYC 227 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~--ga~~v-i~~~~~~~~~~~~~l~~~~~g~~d~v 227 (339)
.+.+|||+|+ |.+|..+++.+...|+ +|+++.+++++....... ++..+ .|..+ . .+.+.+....++|+|
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~--~~~l~~~~~~~~d~v 89 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G--SDKLVEAIGDDSDAV 89 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C--HHHHHHHhhcCCCEE
Confidence 4578999997 9999999988888899 899988887765433221 22222 23222 1 122323222268999
Q ss_pred EEcCCCHH-------------HHHHHHHHhhcC-CcEEEEeccC
Q 019535 228 FECVGLAS-------------LVQEAYACCRKG-WGKTIVLGVD 257 (339)
Q Consensus 228 ~d~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 257 (339)
|.+.|... ....+++.+... .+++|.++..
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 98876421 123444544432 2578887753
No 400
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.12 E-value=0.16 Score=44.24 Aligned_cols=79 Identities=19% Similarity=0.337 Sum_probs=48.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh--HHHHHHhcCCc-eE--EeCCCCCCccHHHHHHHhcC--CC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GG 223 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~ 223 (339)
.+.++||.|+ |.+|.++++.+...|+ +|+.+++++. ..+.+++.+.. .. .|..+ .+++.+.+.+... ++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~ 85 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK--IDGIPALLERAVAEFGH 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhCC
Confidence 3678999987 8999999999999999 8888765432 22333344422 22 22222 1223333333221 37
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|++|+++|.
T Consensus 86 ~D~li~~Ag~ 95 (253)
T PRK08993 86 IDILVNNAGL 95 (253)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 401
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=95.11 E-value=0.27 Score=42.95 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=30.3
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 185 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~ 185 (339)
-.+.+|+|+|-|.+|+.+++++...|+ +|++++.
T Consensus 36 l~g~~vaIqGfGnVG~~~a~~L~e~Ga-kvvaVsD 69 (254)
T cd05313 36 LKGKRVAISGSGNVAQYAAEKLLELGA-KVVTLSD 69 (254)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 357899999999999999999999999 8987764
No 402
>PRK06484 short chain dehydrogenase; Validated
Probab=95.07 E-value=0.12 Score=50.41 Aligned_cols=79 Identities=16% Similarity=0.258 Sum_probs=53.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc---eEEeCCCCCCccHHHHHHHhcC--CCc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT---EFVNSKNCGDKSVSQIIIDMTD--GGA 224 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~---~vi~~~~~~~~~~~~~l~~~~~--g~~ 224 (339)
.++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+ ++++.. ..+|..+ .+.+.+.+.+... +++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999987 8999999999999999 999999887776554 445532 2234333 2333333333322 379
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|++|++.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999998764
No 403
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.07 E-value=0.17 Score=39.71 Aligned_cols=96 Identities=22% Similarity=0.264 Sum_probs=55.9
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-------------------HHHHH----HhcC-CceEEeCCCCC
Q 019535 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KFEIG----KRFG-VTEFVNSKNCG 208 (339)
Q Consensus 153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-------------------~~~~~----~~~g-a~~vi~~~~~~ 208 (339)
..+|+|+|+|++|...+..+...|..++..++.+.- |.+.+ +++. ...+.....
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~-- 79 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE-- 79 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence 468999999999999999999999988888875421 11111 2221 122222211
Q ss_pred CccH-HHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 209 DKSV-SQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 209 ~~~~-~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
.+ .+.+.++. .++|+||+|..+...-..+.+.+... +.-+..
T Consensus 80 --~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~i~ 122 (135)
T PF00899_consen 80 --KIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPFID 122 (135)
T ss_dssp --HCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EEEE
T ss_pred --ccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCEEE
Confidence 11 12222222 25899999998877555555556554 544333
No 404
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.06 E-value=0.3 Score=41.17 Aligned_cols=35 Identities=37% Similarity=0.441 Sum_probs=31.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~ 186 (339)
...+|+|+|+|++|...++.+...|..+++.++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 35689999999999999999999999789888877
No 405
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=95.06 E-value=0.25 Score=39.88 Aligned_cols=80 Identities=15% Similarity=0.099 Sum_probs=54.9
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-----------ceEEeCCCCCCccHHHHHHHhcCCC
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-----------TEFVNSKNCGDKSVSQIIIDMTDGG 223 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga-----------~~vi~~~~~~~~~~~~~l~~~~~g~ 223 (339)
+|.|+|+|..|.+++.++...|. +|....++++..+.+++-+. ..+.-+ .++.+.+ .+
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t-----~dl~~a~-----~~ 69 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKAT-----TDLEEAL-----ED 69 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEE-----SSHHHHH-----TT
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccc-----cCHHHHh-----Cc
Confidence 58899999999999999999998 99999999887777754221 112111 2333333 25
Q ss_pred ccEEEEcCCCHHHHHHHHHHhhc
Q 019535 224 ADYCFECVGLASLVQEAYACCRK 246 (339)
Q Consensus 224 ~d~v~d~~g~~~~~~~~~~~l~~ 246 (339)
.|+++-++++.. .+..++.+.+
T Consensus 70 ad~IiiavPs~~-~~~~~~~l~~ 91 (157)
T PF01210_consen 70 ADIIIIAVPSQA-HREVLEQLAP 91 (157)
T ss_dssp -SEEEE-S-GGG-HHHHHHHHTT
T ss_pred ccEEEecccHHH-HHHHHHHHhh
Confidence 799999999876 6666666655
No 406
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.06 E-value=0.19 Score=43.81 Aligned_cols=79 Identities=18% Similarity=0.298 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-- 221 (339)
.+.+++|.|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+.. .. .|..+ ...+...+.+...
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 4788999987 8999999988888999 899999987654443 233421 12 23333 1223333333221
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|.+.|.
T Consensus 87 ~~id~vi~~ag~ 98 (256)
T PRK06124 87 GRLDILVNNVGA 98 (256)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 407
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=95.06 E-value=0.32 Score=43.22 Aligned_cols=88 Identities=19% Similarity=0.195 Sum_probs=63.3
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhH-HHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 233 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~-~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~ 233 (339)
+|..+|.|.+|.-.++-+...|+ .+.+.++++++ .+.++..|+...- ...+.+. ..|+||-|+++
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~--------s~~eaa~-----~aDvVitmv~~ 67 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAA--------SPAEAAA-----EADVVITMLPD 67 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccC--------CHHHHHH-----hCCEEEEecCC
Confidence 57888999999999999999999 99999999999 8888888875431 2222222 36888888887
Q ss_pred HHHHHHHH-------HHhhcCCcEEEEeccC
Q 019535 234 ASLVQEAY-------ACCRKGWGKTIVLGVD 257 (339)
Q Consensus 234 ~~~~~~~~-------~~l~~~~G~~v~~g~~ 257 (339)
...++..+ ..++++ ..+|+++..
T Consensus 68 ~~~V~~V~~g~~g~~~~~~~G-~i~IDmSTi 97 (286)
T COG2084 68 DAAVRAVLFGENGLLEGLKPG-AIVIDMSTI 97 (286)
T ss_pred HHHHHHHHhCccchhhcCCCC-CEEEECCCC
Confidence 66555544 223355 666666543
No 408
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=95.05 E-value=0.28 Score=40.60 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=31.7
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~ 193 (339)
+|.|+|+|.+|...+.++...|+ +|...+.+++..+.+
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~ 38 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERA 38 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhh
Confidence 58899999999999988888899 999999999876555
No 409
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=95.05 E-value=0.28 Score=46.61 Aligned_cols=102 Identities=11% Similarity=0.190 Sum_probs=64.7
Q ss_pred HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHHHHH
Q 019535 145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIII 217 (339)
Q Consensus 145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~~l~ 217 (339)
...+.++++++||-+|+|+ |..++.+++..+..+|++++.++++.+.++ ++|.. .+ .+.+. ... .
T Consensus 231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~----~ 302 (426)
T TIGR00563 231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGP----S 302 (426)
T ss_pred HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccc----c
Confidence 3456778899999998754 555556666665338999999999877664 35654 22 22111 100 0
Q ss_pred HhcC-CCccEEE-E--cCCC-------------------------HHHHHHHHHHhhcCCcEEEEec
Q 019535 218 DMTD-GGADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 218 ~~~~-g~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g 255 (339)
.... +.||.|| | |+|. ...+..+++.++++ |+++..-
T Consensus 303 ~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvyst 368 (426)
T TIGR00563 303 QWAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYAT 368 (426)
T ss_pred ccccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 1112 2799998 4 5543 23577889999997 9988654
No 410
>PRK06398 aldose dehydrogenase; Validated
Probab=95.04 E-value=0.09 Score=46.09 Aligned_cols=74 Identities=22% Similarity=0.279 Sum_probs=48.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhcC--CCccEE
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADYC 227 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~~--g~~d~v 227 (339)
.++++||.|+ |.+|.+.+..+...|+ +|+.++++.++.. ... ...|..+ .+.+.+.+.+... +.+|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~--~~~i~~~~~~~~~~~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN--KEQVIKGIDYVISKYGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 3678999987 8999999999999999 8999887654322 111 1234333 1233333333221 369999
Q ss_pred EEcCCC
Q 019535 228 FECVGL 233 (339)
Q Consensus 228 ~d~~g~ 233 (339)
|++.|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998873
No 411
>PRK06720 hypothetical protein; Provisional
Probab=95.04 E-value=0.23 Score=40.60 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=31.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHH
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF 190 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~ 190 (339)
.+..++|.|+ +++|...+..+...|+ +|+.++++.+..
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~ 53 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESG 53 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 4678899987 7899999988888899 899998876654
No 412
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.04 E-value=0.22 Score=40.99 Aligned_cols=33 Identities=27% Similarity=0.226 Sum_probs=29.1
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 187 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~ 187 (339)
+|+|+|+|++|...++.+...|..++..++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999998888888764
No 413
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.04 E-value=0.17 Score=45.74 Aligned_cols=94 Identities=12% Similarity=0.003 Sum_probs=62.8
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHH-cCCCEEEEEcCChhHHHHH-HhcCCc--eEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIG-KRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADY 226 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~-~G~~~Vi~~~~~~~~~~~~-~~~ga~--~vi~~~~~~~~~~~~~l~~~~~g~~d~ 226 (339)
....+++|+|+|..|.+.++.+.. .+.++|.+..+++++.+.+ +++... .+. . .+..+.+. .+|+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av~-----~aDi 191 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIPE-----AVDL 191 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHhh-----cCCE
Confidence 456789999999999998887764 6777899999998876554 334311 111 1 23333332 5899
Q ss_pred EEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 227 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 227 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
|+.|+++...+-..+ ++++ -++..+|...
T Consensus 192 VitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~ 220 (304)
T PRK07340 192 VVTATTSRTPVYPEA--ARAG-RLVVAVGAFT 220 (304)
T ss_pred EEEccCCCCceeCcc--CCCC-CEEEecCCCC
Confidence 999888655332333 6786 7788888654
No 414
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=95.03 E-value=0.13 Score=44.90 Aligned_cols=96 Identities=14% Similarity=0.145 Sum_probs=63.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-C----C-----ceEEeCCCCCCccHHHHHHHhcC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-G----V-----TEFVNSKNCGDKSVSQIIIDMTD 221 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-g----a-----~~vi~~~~~~~~~~~~~l~~~~~ 221 (339)
..++|||+|+|. |..+-.+++....++|.+++.+++-.+.++++ + . .+++. .+-...+++...
T Consensus 76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~------~Dg~~~l~~~~~ 148 (246)
T PF01564_consen 76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII------GDGRKFLKETQE 148 (246)
T ss_dssp ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE------STHHHHHHTSSS
T ss_pred CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE------hhhHHHHHhccC
Confidence 688999998654 55566777776666999999999888888763 1 1 12332 344555555433
Q ss_pred CCccEEE-EcCC---------CHHHHHHHHHHhhcCCcEEEEec
Q 019535 222 GGADYCF-ECVG---------LASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 222 g~~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
..+|+|| |... +.+-++.+.++|+++ |.++.-.
T Consensus 149 ~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 149 EKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp T-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 3799998 6554 234588999999997 9988765
No 415
>PLN02928 oxidoreductase family protein
Probab=95.01 E-value=0.15 Score=46.85 Aligned_cols=96 Identities=22% Similarity=0.344 Sum_probs=58.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC----C-ceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG----V-TEFVNSKNCGDKSVSQIIIDMTDGGADY 226 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g----a-~~vi~~~~~~~~~~~~~l~~~~~g~~d~ 226 (339)
.+.++.|+|.|.+|+.+++.++.+|+ +|++.+++..+... ..++ . ....+... ...++.+.+.+ .|+
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~L~ell~~-----aDi 229 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKG-GHEDIYEFAGE-----ADI 229 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccC-cccCHHHHHhh-----CCE
Confidence 47899999999999999999999999 99999876332111 1110 0 00010000 01233333322 688
Q ss_pred EEEcCCCHHH-----HHHHHHHhhcCCcEEEEecc
Q 019535 227 CFECVGLASL-----VQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 227 v~d~~g~~~~-----~~~~~~~l~~~~G~~v~~g~ 256 (339)
|+.+.+.... -...+..|+++ ..+|.++.
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR 263 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR 263 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence 8887763221 24667788886 77777763
No 416
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.00 E-value=0.18 Score=44.02 Aligned_cols=79 Identities=18% Similarity=0.199 Sum_probs=50.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-- 221 (339)
.+.++||.|+ +.+|...++.+...|+ +++.++++.++.+.+ +..+.. .+ .|..+ .+.+.+.+.....
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 3688999987 8999999998888999 888888877665443 223322 22 33333 1222233332221
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|+++.+.|.
T Consensus 87 ~~~d~li~~ag~ 98 (255)
T PRK06113 87 GKVDILVNNAGG 98 (255)
T ss_pred CCCCEEEECCCC
Confidence 378999998873
No 417
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.00 E-value=0.48 Score=40.62 Aligned_cols=102 Identities=19% Similarity=0.217 Sum_probs=60.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh------hHH--HHHHhcC----------------CceEEeCCCC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS------EKF--EIGKRFG----------------VTEFVNSKNC 207 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~------~~~--~~~~~~g----------------a~~vi~~~~~ 207 (339)
..++|+|+|.|++|..++..+...|+.++..++.+. +++ ......| ..+|-..++
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~- 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND- 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence 357899999999999999999999998888776432 111 1111112 112221221
Q ss_pred CCccHHHHHHHhcCCCccEEEEcCCCHHH-HHHHHHHhhcCCcEEEEeccC
Q 019535 208 GDKSVSQIIIDMTDGGADYCFECVGLASL-VQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 208 ~~~~~~~~l~~~~~g~~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~ 257 (339)
--..+.+.++...++|+|+||+.+-.. ...+..|.+.+ =.+|..+..
T Consensus 108 --f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Ga 155 (263)
T COG1179 108 --FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGA 155 (263)
T ss_pred --hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccc
Confidence 112234455555689999999987653 23333355554 456665543
No 418
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.97 E-value=0.3 Score=43.30 Aligned_cols=102 Identities=15% Similarity=0.154 Sum_probs=61.3
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC-C-ceEEeCCCC--CCccHHHHHHHhcCCCccE
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V-TEFVNSKNC--GDKSVSQIIIDMTDGGADY 226 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g-a-~~vi~~~~~--~~~~~~~~l~~~~~g~~d~ 226 (339)
..+++||++|+|. |..+..+++.....++.+++.+++-.+.+++.- . ...++.... ...+..+.+++ ..+.+|+
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~-~~~~yDv 148 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLAD-TENTFDV 148 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHh-CCCCccE
Confidence 3456999998764 555666666665558999999988777776521 0 000100000 00233343433 2348999
Q ss_pred EE-EcC---C------CHHHHHHHHHHhhcCCcEEEEec
Q 019535 227 CF-ECV---G------LASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 227 v~-d~~---g------~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
|| |.. + ....++.+.+.|+++ |.++...
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 98 443 1 123367888999998 9988774
No 419
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.97 E-value=0.18 Score=44.11 Aligned_cols=78 Identities=18% Similarity=0.199 Sum_probs=48.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-e--EEeCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-E--FVNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~--vi~~~~~~~~~~~~~l~~~~--~ 221 (339)
.+.++||.|+ |.+|.+.++.+...|+ +|+.+.++ ++.+.+ .+.+.. . ..|..+ .+.+.+.+.+.. .
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK--PESAEKVVKEALEEF 89 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4689999987 8999999999999999 88888876 332222 223322 1 233333 122222233222 1
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|+++++.|.
T Consensus 90 g~id~li~~ag~ 101 (258)
T PRK06935 90 GKIDILVNNAGT 101 (258)
T ss_pred CCCCEEEECCCC
Confidence 368999998874
No 420
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.97 E-value=0.35 Score=43.31 Aligned_cols=92 Identities=17% Similarity=0.161 Sum_probs=54.8
Q ss_pred CEEEEEccCHHHHH-HHHHHHHcCCCEEEEEc-CChh--HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE
Q 019535 154 STVVIFGLGSIGLA-VAEGARLCGATRIIGVD-VISE--KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 229 (339)
Q Consensus 154 ~~VLI~G~G~iG~~-a~~la~~~G~~~Vi~~~-~~~~--~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d 229 (339)
-+|.|+|+|.+|.. +..+.+.-+. ++.+++ .+++ .+.+++++|..... .++.+.+..-.-..+|+||+
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~-------~~ie~LL~~~~~~dIDiVf~ 76 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA-------EGIDGLLAMPEFDDIDIVFD 76 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc-------CCHHHHHhCcCCCCCCEEEE
Confidence 46899999999987 4455554466 555554 4443 34566778754322 22333332100026999999
Q ss_pred cCCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 230 CVGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 230 ~~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+++.....+.+..++.. |..++..
T Consensus 77 AT~a~~H~e~a~~a~ea--Gk~VID~ 100 (302)
T PRK08300 77 ATSAGAHVRHAAKLREA--GIRAIDL 100 (302)
T ss_pred CCCHHHHHHHHHHHHHc--CCeEEEC
Confidence 99988755555555555 5544443
No 421
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=94.95 E-value=0.13 Score=46.20 Aligned_cols=84 Identities=14% Similarity=0.128 Sum_probs=53.2
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCC--CccHHHHHHHhcCCCccEEEEcCC
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG--DKSVSQIIIDMTDGGADYCFECVG 232 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~--~~~~~~~l~~~~~g~~d~v~d~~g 232 (339)
+|+|+|+|.+|.+.+..+...|. +|..+++++++.+.+++.|... + +... .........+. +.+|+||-|+.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~~--~~~d~vila~k 75 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAEL--GPQDLVILAVK 75 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhHc--CCCCEEEEecc
Confidence 58999999999998888888898 8999998777777776655321 1 0000 00000011111 36899999988
Q ss_pred CHHHHHHHHHHhh
Q 019535 233 LASLVQEAYACCR 245 (339)
Q Consensus 233 ~~~~~~~~~~~l~ 245 (339)
... .+.+++.+.
T Consensus 76 ~~~-~~~~~~~l~ 87 (304)
T PRK06522 76 AYQ-LPAALPSLA 87 (304)
T ss_pred ccc-HHHHHHHHh
Confidence 655 444444444
No 422
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=94.95 E-value=0.12 Score=44.53 Aligned_cols=103 Identities=20% Similarity=0.371 Sum_probs=65.8
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQII 216 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l 216 (339)
+.....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++ .+.+. ++..+. .++
T Consensus 37 ~l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~---- 108 (231)
T TIGR02752 37 TMKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNA---MEL---- 108 (231)
T ss_pred HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEech---hcC----
Confidence 34556778899999999864 6677788877642 289999999888777654 22221 222111 110
Q ss_pred HHhcCCCccEEEEcC-----C-CHHHHHHHHHHhhcCCcEEEEecc
Q 019535 217 IDMTDGGADYCFECV-----G-LASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 217 ~~~~~g~~d~v~d~~-----g-~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
....+.+|+|+-.. . -...++++.+.|+++ |+++.+..
T Consensus 109 -~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 152 (231)
T TIGR02752 109 -PFDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET 152 (231)
T ss_pred -CCCCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence 11223799997432 1 133477889999997 99987654
No 423
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.94 E-value=0.15 Score=51.30 Aligned_cols=113 Identities=22% Similarity=0.274 Sum_probs=66.2
Q ss_pred ccceEEeeccceEEcCCCCCccccccccchhhhhhHHHHHhcCCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019535 107 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV 185 (339)
Q Consensus 107 ~~~~~~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~ 185 (339)
..+|.-+++...+.+ +..+.+++-.-..+ ....-.++++||.|+ |.+|.++++.+...|+ +|+.+++
T Consensus 379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r 446 (676)
T TIGR02632 379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADL 446 (676)
T ss_pred ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeC
Confidence 355666666666665 55544544321100 001124688999987 8999999999989999 9999998
Q ss_pred ChhHHHHHHh-----cCCc--e--EEeCCCCCCccHHHHHHHhc--CCCccEEEEcCCC
Q 019535 186 ISEKFEIGKR-----FGVT--E--FVNSKNCGDKSVSQIIIDMT--DGGADYCFECVGL 233 (339)
Q Consensus 186 ~~~~~~~~~~-----~ga~--~--vi~~~~~~~~~~~~~l~~~~--~g~~d~v~d~~g~ 233 (339)
+.++.+.+.+ .+.. . ..|..+ ...+.+.+.+.. -+++|++|+++|.
T Consensus 447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd--~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 447 NLEAAEAVAAEINGQFGAGRAVALKMDVTD--EQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEEECCCCC--HHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 8776554421 2321 1 123322 122333333322 2379999998874
No 424
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.93 E-value=0.31 Score=44.32 Aligned_cols=88 Identities=24% Similarity=0.294 Sum_probs=59.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEE-c
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE-C 230 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d-~ 230 (339)
.|.++.|+|.|.||++.++.++..|+ +|+..++++. .+..+..++.++ ++.+.+++ .|++.- |
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~---------~l~ell~~-----sDii~l~~ 208 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV---------DLDELLAE-----SDIISLHC 208 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec---------cHHHHHHh-----CCEEEEeC
Confidence 48999999999999999999999999 9999998765 333333444322 12222322 577764 4
Q ss_pred CCCHHH----HHHHHHHhhcCCcEEEEecc
Q 019535 231 VGLASL----VQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 231 ~g~~~~----~~~~~~~l~~~~G~~v~~g~ 256 (339)
-.++++ -...++.|+++ ..+|.++.
T Consensus 209 Plt~~T~hLin~~~l~~mk~g-a~lVNtaR 237 (324)
T COG1052 209 PLTPETRHLINAEELAKMKPG-AILVNTAR 237 (324)
T ss_pred CCChHHhhhcCHHHHHhCCCC-eEEEECCC
Confidence 444432 23566778886 77777764
No 425
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.93 E-value=0.2 Score=43.37 Aligned_cols=83 Identities=19% Similarity=0.218 Sum_probs=51.6
Q ss_pred CCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc--eE--EeCCCCCCccHHHHHHHhc
Q 019535 150 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT--EF--VNSKNCGDKSVSQIIIDMT 220 (339)
Q Consensus 150 ~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~--~v--i~~~~~~~~~~~~~l~~~~ 220 (339)
..++.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+.. .+ .+.......++.+.+..+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 446789999987 8999999988888899 899999887654333 233321 12 2222101123333333322
Q ss_pred C--CCccEEEEcCCC
Q 019535 221 D--GGADYCFECVGL 233 (339)
Q Consensus 221 ~--g~~d~v~d~~g~ 233 (339)
. +.+|++|.+++.
T Consensus 88 ~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQFGRLDGVLHNAGL 102 (247)
T ss_pred HHhCCCCEEEECCcc
Confidence 2 368999987763
No 426
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.89 E-value=0.18 Score=43.74 Aligned_cols=77 Identities=22% Similarity=0.362 Sum_probs=49.3
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-eE--EeCCCCCCccHHHHHHHhc--CCC
Q 019535 154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMT--DGG 223 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~ 223 (339)
.++||.|+ |.+|...+..+...|. +|+++++++++.+.+.. .+.. .. .|..+ .+++.+.+.+.. .++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFGG 78 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcCC
Confidence 57999987 9999999988888999 89999998776655433 2322 11 23333 122323222221 236
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999987764
No 427
>PF10294 Methyltransf_16: Putative methyltransferase; InterPro: IPR019410 There are a number of unidentified genes that have a high probability of coding for methyltransferases. They make up approximately 0.6-1.6% of the genes in the yeast, human, mouse, Drosophila melanogaster, Caenorhabditis elegans, Arabidopsis thaliana, and Escherichia coli genomes []. This entry represents putative nicotinamide N-methyltransferases involved in rDNA silencing and in lifespan determination. ; PDB: 3BZB_A.
Probab=94.88 E-value=0.066 Score=44.04 Aligned_cols=101 Identities=23% Similarity=0.312 Sum_probs=50.1
Q ss_pred cCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cC--CceEEeCCCCCCccHHHHH-HHhc
Q 019535 148 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FG--VTEFVNSKNCGDKSVSQII-IDMT 220 (339)
Q Consensus 148 ~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~g--a~~vi~~~~~~~~~~~~~l-~~~~ 220 (339)
.....+.+||-+|+| +|+..+.+++..+..+|+.++.++ -.+.++. .+ ...-+.... .+|.+.+ .+..
T Consensus 41 ~~~~~~~~VLELGaG-~Gl~gi~~a~~~~~~~Vv~TD~~~-~l~~l~~Ni~~N~~~~~~~v~v~~---L~Wg~~~~~~~~ 115 (173)
T PF10294_consen 41 PELFRGKRVLELGAG-TGLPGIAAAKLFGAARVVLTDYNE-VLELLRRNIELNGSLLDGRVSVRP---LDWGDELDSDLL 115 (173)
T ss_dssp GGGTTTSEEEETT-T-TSHHHHHHHHT-T-SEEEEEE-S--HHHHHHHHHHTT--------EEEE-----TTS-HHHHHH
T ss_pred hhhcCCceEEEECCc-cchhHHHHHhccCCceEEEeccch-hhHHHHHHHHhccccccccccCcE---EEecCccccccc
Confidence 345678899999986 566666666665666999999876 5555543 12 011111111 2222222 2223
Q ss_pred CC-CccEEE--EcCCCH----HHHHHHHHHhhcCCcEEEEec
Q 019535 221 DG-GADYCF--ECVGLA----SLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 221 ~g-~~d~v~--d~~g~~----~~~~~~~~~l~~~~G~~v~~g 255 (339)
.. .||+|| |++=.+ ..++.+..++.++ +. +.++
T Consensus 116 ~~~~~D~IlasDv~Y~~~~~~~L~~tl~~ll~~~-~~-vl~~ 155 (173)
T PF10294_consen 116 EPHSFDVILASDVLYDEELFEPLVRTLKRLLKPN-GK-VLLA 155 (173)
T ss_dssp S-SSBSEEEEES--S-GGGHHHHHHHHHHHBTT--TT-EEEE
T ss_pred ccccCCEEEEecccchHHHHHHHHHHHHHHhCCC-CE-EEEE
Confidence 34 899998 666543 3355666677776 66 4443
No 428
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=94.88 E-value=0.32 Score=43.34 Aligned_cols=88 Identities=18% Similarity=0.266 Sum_probs=56.4
Q ss_pred EEEEEccCHHHHHH-HHHHHHcCCCEEEEEc-CChhH--HHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 155 TVVIFGLGSIGLAV-AEGARLCGATRIIGVD-VISEK--FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 155 ~VLI~G~G~iG~~a-~~la~~~G~~~Vi~~~-~~~~~--~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
+|.|+|+|.+|... ..+.+..++ ++.+++ .++++ +++++++|.....+ ++.+.+. ...+|+||++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll~---~~dIDaV~ia 71 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLLA---NPDIDIVFDA 71 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHhc---CCCCCEEEEC
Confidence 68899999999855 566665567 666554 34443 45677788654431 2222221 1269999999
Q ss_pred CCCHHHHHHHHHHhhcCCcEEEEec
Q 019535 231 VGLASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 231 ~g~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
++.....+.+..++.. |..++..
T Consensus 72 Tp~~~H~e~a~~al~a--Gk~VIde 94 (285)
T TIGR03215 72 TSAKAHARHARLLAEL--GKIVIDL 94 (285)
T ss_pred CCcHHHHHHHHHHHHc--CCEEEEC
Confidence 9998866666666666 5555543
No 429
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.88 E-value=0.22 Score=42.96 Aligned_cols=79 Identities=22% Similarity=0.231 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-eE--EeCCCCCCccHHHHHHHhc--CCCc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGA 224 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~~ 224 (339)
++.++||.|+ |.+|..+++.+...|+ .|+...++.++.+.+ ..++.. .+ .|..+ .+.+.+.+.+.. -+++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD--RDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 3678999987 9999999988888998 888888777665544 333321 22 22222 122222222221 1379
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12936 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999998874
No 430
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.87 E-value=0.39 Score=41.62 Aligned_cols=74 Identities=26% Similarity=0.320 Sum_probs=47.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eE--EeCCCCCCccHHHHHHHhcC--CCcc
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGAD 225 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~--g~~d 225 (339)
.+.++||.|+ |.+|...++.+...|+ +|+.++++. .+..+.. .. .|..+ .+.+.+.+.+... +.+|
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 78 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD--AAAVAQVCQRLLAETGPLD 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 3578999987 8999999998888999 899998765 2222211 11 23332 1223333333221 3689
Q ss_pred EEEEcCCC
Q 019535 226 YCFECVGL 233 (339)
Q Consensus 226 ~v~d~~g~ 233 (339)
++|++.|.
T Consensus 79 ~vi~~ag~ 86 (252)
T PRK08220 79 VLVNAAGI 86 (252)
T ss_pred EEEECCCc
Confidence 99998874
No 431
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.86 E-value=0.13 Score=45.49 Aligned_cols=81 Identities=19% Similarity=0.227 Sum_probs=53.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc------eEEeCCCC-CCccHHHHHHHh
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT------EFVNSKNC-GDKSVSQIIIDM 219 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga~------~vi~~~~~-~~~~~~~~l~~~ 219 (339)
.+..+||.|+ .++|.+.+..+...|+ +|+.+.+++++.+..++ .+.. .+.|..+. ....+.+...+.
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 5677888887 7999999999999999 99999999887655432 2221 23333330 011122233333
Q ss_pred cCCCccEEEEcCCC
Q 019535 220 TDGGADYCFECVGL 233 (339)
Q Consensus 220 ~~g~~d~v~d~~g~ 233 (339)
..|++|+.++..|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 34589999997764
No 432
>PRK12743 oxidoreductase; Provisional
Probab=94.86 E-value=0.22 Score=43.45 Aligned_cols=78 Identities=18% Similarity=0.081 Sum_probs=47.4
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHH----HHhcCCc-eE--EeCCCCCCccHHHHHHHhcC--
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEI----GKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~~~~~----~~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~-- 221 (339)
++++||.|+ |.+|..+++.+...|+ +|+.+.+ +.++.+. ++..+.. +. .|..+ .+.+.+.+.+...
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD--LPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 468999987 8999999999999999 7877654 4333322 2334532 22 23333 2222232333221
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|.+.|.
T Consensus 79 ~~id~li~~ag~ 90 (256)
T PRK12743 79 GRIDVLVNNAGA 90 (256)
T ss_pred CCCCEEEECCCC
Confidence 368999998874
No 433
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=94.86 E-value=0.44 Score=40.70 Aligned_cols=35 Identities=31% Similarity=0.501 Sum_probs=29.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEE-cCCh
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGV-DVIS 187 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~-~~~~ 187 (339)
.+.+|+|+|-|.+|+.+++++...|. +++++ +.+.
T Consensus 22 ~g~~vaIqGfGnVG~~~a~~L~~~G~-~vV~vsD~~g 57 (217)
T cd05211 22 EGLTVAVQGLGNVGWGLAKKLAEEGG-KVLAVSDPDG 57 (217)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 57899999999999999999999999 55554 4444
No 434
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.84 E-value=0.21 Score=43.58 Aligned_cols=79 Identities=22% Similarity=0.185 Sum_probs=49.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC-hhHHHHHHhcCCce-EEeCCCCCCccHHHHHHHhcC--CCccE
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY 226 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~-~~~~~~~~~~ga~~-vi~~~~~~~~~~~~~l~~~~~--g~~d~ 226 (339)
.+.+++|.|+ |.+|...++.+...|+ +|+.+.++ ++..+.++..+... ..|..+ .+.+.+.+.+... +++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 3678999987 8999999999988999 78776543 33344444334322 234333 1233333333221 37999
Q ss_pred EEEcCCC
Q 019535 227 CFECVGL 233 (339)
Q Consensus 227 v~d~~g~ 233 (339)
+|.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998864
No 435
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.83 E-value=0.24 Score=45.72 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=31.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 187 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~ 187 (339)
...+|+|+|+|++|..+++.+...|..++..++.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 357899999999999999999999998988887654
No 436
>PLN02256 arogenate dehydrogenase
Probab=94.80 E-value=0.6 Score=42.15 Aligned_cols=97 Identities=12% Similarity=0.167 Sum_probs=61.8
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCC
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGG 223 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~ 223 (339)
+.+...-....+|.|+|.|.+|...+..++..|. +|+++++++. .+.++.+|+.. . . +..+.+ ...
T Consensus 27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~--~-----~~~e~~----~~~ 92 (304)
T PLN02256 27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F--R-----DPDDFC----EEH 92 (304)
T ss_pred HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e--C-----CHHHHh----hCC
Confidence 3444444566789999999999999888888898 8999988764 35556667531 1 1 222211 124
Q ss_pred ccEEEEcCCCHHHHHHHHHH-----hhcCCcEEEEecc
Q 019535 224 ADYCFECVGLASLVQEAYAC-----CRKGWGKTIVLGV 256 (339)
Q Consensus 224 ~d~v~d~~g~~~~~~~~~~~-----l~~~~G~~v~~g~ 256 (339)
.|+||-|+.... ....++- +.++ ..++.++.
T Consensus 93 aDvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 93 PDVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred CCEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence 789998888655 3443333 3454 55666654
No 437
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.79 E-value=0.14 Score=45.28 Aligned_cols=47 Identities=23% Similarity=0.084 Sum_probs=39.1
Q ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh
Q 019535 149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 195 (339)
Q Consensus 149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~ 195 (339)
+...+.+++|+|+|+.+++++.-+...|+++|+++.|++++.+.+.+
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~ 164 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAE 164 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence 34455689999999999999999999999789999999887766543
No 438
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=94.79 E-value=0.21 Score=46.17 Aligned_cols=102 Identities=23% Similarity=0.313 Sum_probs=66.1
Q ss_pred HhcCCCCCCEEEEEc-c-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce--EEeCCCCCCccHHHHHH
Q 019535 146 RTANVEVGSTVVIFG-L-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE--FVNSKNCGDKSVSQIII 217 (339)
Q Consensus 146 ~~~~~~~~~~VLI~G-~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~--vi~~~~~~~~~~~~~l~ 217 (339)
..++.++|++||-.- + |+--...+++....|. .|++.+.++.+...+ +++|... +++.++ ..+. .
T Consensus 150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~---~~~~---~ 222 (355)
T COG0144 150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDA---RRLA---E 222 (355)
T ss_pred HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEeccc---cccc---c
Confidence 457789999999994 3 5444444555555566 789999999988776 4588764 333332 1111 1
Q ss_pred HhcCC-CccEEE-E--cCCC-------------------------HHHHHHHHHHhhcCCcEEEEec
Q 019535 218 DMTDG-GADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 218 ~~~~g-~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g 255 (339)
....+ .||.|+ | |+|. ...+..+++.++++ |++|-.-
T Consensus 223 ~~~~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~G-G~LVYST 288 (355)
T COG0144 223 LLPGGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPG-GVLVYST 288 (355)
T ss_pred cccccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEc
Confidence 11222 489987 5 7765 33578889999997 8776543
No 439
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.79 E-value=0.22 Score=43.81 Aligned_cols=76 Identities=22% Similarity=0.219 Sum_probs=47.9
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eEE--eCCCCCCccHHHHHHHhc--CCCc
Q 019535 155 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMT--DGGA 224 (339)
Q Consensus 155 ~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~vi--~~~~~~~~~~~~~l~~~~--~g~~ 224 (339)
++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+ +..+.. .++ |..+ .+++.+.+.+.. .+++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD--YSQLTALAQACEEKWGGI 78 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 6899987 8999999988888999 899999887665433 223322 222 2222 122222222221 1379
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|++|+++|.
T Consensus 79 d~lI~~ag~ 87 (270)
T PRK05650 79 DVIVNNAGV 87 (270)
T ss_pred CEEEECCCC
Confidence 999998874
No 440
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.74 E-value=0.22 Score=43.99 Aligned_cols=78 Identities=18% Similarity=0.112 Sum_probs=48.9
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCce-E--EeCCCCCCccHHHHHHHhc--CC
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMT--DG 222 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~~-v--i~~~~~~~~~~~~~l~~~~--~g 222 (339)
..++||.|+ |.+|...++.+...|+ +|++++++.++.+.+ +..+... . .|..+ .+.+.+.+.+.. .+
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD--PDSVKSFVAQAEEALG 86 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHhcC
Confidence 458999987 9999999998888999 898888876654332 2234321 2 23322 122222232221 23
Q ss_pred CccEEEEcCCC
Q 019535 223 GADYCFECVGL 233 (339)
Q Consensus 223 ~~d~v~d~~g~ 233 (339)
++|++|.++|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 68999998874
No 441
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.73 E-value=0.31 Score=43.99 Aligned_cols=81 Identities=21% Similarity=0.281 Sum_probs=47.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh-hHHH----HHHhcCCceEEeCCCCCCccHHHHHHHh-c-CCC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFE----IGKRFGVTEFVNSKNCGDKSVSQIIIDM-T-DGG 223 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~-~~~~----~~~~~ga~~vi~~~~~~~~~~~~~l~~~-~-~g~ 223 (339)
.+.++||.|+ |.+|...++.+...|+ +|+..+++. ++.+ .++..|.......-+....+-.+.+.+. . -++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 4678999987 8999999998888999 888887642 2222 2233343222211121112222222211 1 247
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|++|+++|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 442
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.73 E-value=0.22 Score=42.53 Aligned_cols=93 Identities=13% Similarity=0.074 Sum_probs=57.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
++.+|||+|+|.++.-=++.+...|+ +|.+++..-. ....+.+.|....+. +++...+ + .++++||-|
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~~~~~d-------l--~g~~LViaA 92 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GNYDKEF-------I--KDKHLIVIA 92 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CCCChHH-------h--CCCcEEEEC
Confidence 46789999999999877778888899 8888865432 222232334323332 2211111 1 268999999
Q ss_pred CCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 231 VGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 231 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
++.+..-+......... +.++....
T Consensus 93 TdD~~vN~~I~~~a~~~-~~lvn~vd 117 (223)
T PRK05562 93 TDDEKLNNKIRKHCDRL-YKLYIDCS 117 (223)
T ss_pred CCCHHHHHHHHHHHHHc-CCeEEEcC
Confidence 99998444555555554 66666543
No 443
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.72 E-value=0.29 Score=42.29 Aligned_cols=76 Identities=20% Similarity=0.170 Sum_probs=47.7
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----c-CCc-eEE--eCCCCCCccHHHHHHHhcCCCc
Q 019535 154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F-GVT-EFV--NSKNCGDKSVSQIIIDMTDGGA 224 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~-ga~-~vi--~~~~~~~~~~~~~l~~~~~g~~ 224 (339)
.+++|.|+ |.+|...++.+...|+ +|+++++++++.+.+.+ . +.. .++ |..+ ..++.+.+.+. ...+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~-~~~~ 77 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD--TASHAAFLDSL-PALP 77 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC--hHHHHHHHHHH-hhcC
Confidence 47899987 9999999998888999 89999998876544321 1 111 222 2222 12233333322 2257
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|+++.+.|.
T Consensus 78 d~vv~~ag~ 86 (243)
T PRK07102 78 DIVLIAVGT 86 (243)
T ss_pred CEEEECCcC
Confidence 999987764
No 444
>PRK06940 short chain dehydrogenase; Provisional
Probab=94.69 E-value=0.28 Score=43.50 Aligned_cols=77 Identities=23% Similarity=0.347 Sum_probs=48.6
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-e--EEeCCCCCCccHHHHHHHhc-CCCc
Q 019535 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-E--FVNSKNCGDKSVSQIIIDMT-DGGA 224 (339)
Q Consensus 153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~--vi~~~~~~~~~~~~~l~~~~-~g~~ 224 (339)
+++++|.|+|.+|..+++.+. .|+ +|+.+++++++.+.+ +..+.. . ..|..+ .+.+.+.+.+.. .+++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence 457788898899999998874 798 899999887665433 222322 1 234333 223333333321 1479
Q ss_pred cEEEEcCCC
Q 019535 225 DYCFECVGL 233 (339)
Q Consensus 225 d~v~d~~g~ 233 (339)
|++|+++|.
T Consensus 78 d~li~nAG~ 86 (275)
T PRK06940 78 TGLVHTAGV 86 (275)
T ss_pred CEEEECCCc
Confidence 999998874
No 445
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.68 E-value=0.2 Score=43.99 Aligned_cols=79 Identities=20% Similarity=0.324 Sum_probs=48.1
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCC---hhHHHHH-HhcCCce--EEeCCCCCCccHHHHHHHhcC-
Q 019535 152 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVI---SEKFEIG-KRFGVTE--FVNSKNCGDKSVSQIIIDMTD- 221 (339)
Q Consensus 152 ~~~~VLI~G~---G~iG~~a~~la~~~G~~~Vi~~~~~---~~~~~~~-~~~ga~~--vi~~~~~~~~~~~~~l~~~~~- 221 (339)
.++++||.|+ +++|.++++.+...|+ +|+.+.+. +++.+.+ ++++... ..|..+ .+.+.+.+.....
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 81 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS--DEQIDALFASLGQH 81 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC--HHHHHHHHHHHHHH
Confidence 4678999983 5899999988888999 88877543 2333332 3344322 233333 2334444433322
Q ss_pred -CCccEEEEcCCC
Q 019535 222 -GGADYCFECVGL 233 (339)
Q Consensus 222 -g~~d~v~d~~g~ 233 (339)
+++|+++++.|.
T Consensus 82 ~g~iD~lvnnAG~ 94 (260)
T PRK06997 82 WDGLDGLVHSIGF 94 (260)
T ss_pred hCCCcEEEEcccc
Confidence 479999998763
No 446
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=94.63 E-value=0.17 Score=45.74 Aligned_cols=99 Identities=13% Similarity=0.094 Sum_probs=61.7
Q ss_pred HHHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHH---HHhc-CC---ceEEeCCCCCCccHHHHH
Q 019535 144 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI---GKRF-GV---TEFVNSKNCGDKSVSQII 216 (339)
Q Consensus 144 l~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~---~~~~-ga---~~vi~~~~~~~~~~~~~l 216 (339)
+.......++++||-+|+|. |..+..++.. |+..|++++.++..... ++++ +. .+++. .++
T Consensus 113 ~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~------~~i---- 180 (314)
T TIGR00452 113 VLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP------LGI---- 180 (314)
T ss_pred HHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE------CCH----
Confidence 44445567789999999875 6666666654 66589999988865443 2222 21 12221 111
Q ss_pred HHhcCC-CccEEEEcC-----CCH-HHHHHHHHHhhcCCcEEEEec
Q 019535 217 IDMTDG-GADYCFECV-----GLA-SLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 217 ~~~~~g-~~d~v~d~~-----g~~-~~~~~~~~~l~~~~G~~v~~g 255 (339)
.++... .||+||... .++ ..++++.++|+++ |++++-.
T Consensus 181 e~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvlet 225 (314)
T TIGR00452 181 EQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLET 225 (314)
T ss_pred HHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEEE
Confidence 122222 799998532 222 4588999999998 9998753
No 447
>PRK06436 glycerate dehydrogenase; Provisional
Probab=94.63 E-value=0.25 Score=44.54 Aligned_cols=35 Identities=29% Similarity=0.303 Sum_probs=31.9
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 187 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~ 187 (339)
.+++|.|+|.|.+|+..+++++.+|+ +|++.+++.
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~ 155 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSY 155 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCC
Confidence 47899999999999999999999999 999998763
No 448
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=94.63 E-value=0.15 Score=46.11 Aligned_cols=95 Identities=14% Similarity=0.058 Sum_probs=56.2
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CCceEEeCCCCCCccHH-HHHHHhcCCCccEEEEcCC
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTEFVNSKNCGDKSVS-QIIIDMTDGGADYCFECVG 232 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~-ga~~vi~~~~~~~~~~~-~~l~~~~~g~~d~v~d~~g 232 (339)
+|+|+|+|++|...+-.+...|. .|..+.+++++.+.+++- |. .+.+... ...+. ........+.+|+||-|+-
T Consensus 4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~--~~~~~~~~~~~~~~~~~D~viv~vK 79 (305)
T PRK05708 4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGL-TLVEQGQ--ASLYAIPAETADAAEPIHRLLLACK 79 (305)
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCe-EEeeCCc--ceeeccCCCCcccccccCEEEEECC
Confidence 69999999999888777777898 899999887777777643 42 1211111 00000 0000001136899999886
Q ss_pred CHH---HHHHHHHHhhcCCcEEEEe
Q 019535 233 LAS---LVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 233 ~~~---~~~~~~~~l~~~~G~~v~~ 254 (339)
+.. .++.+...+.++ ..++.+
T Consensus 80 ~~~~~~al~~l~~~l~~~-t~vv~l 103 (305)
T PRK05708 80 AYDAEPAVASLAHRLAPG-AELLLL 103 (305)
T ss_pred HHhHHHHHHHHHhhCCCC-CEEEEE
Confidence 654 233344445565 555555
No 449
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.62 E-value=0.58 Score=40.01 Aligned_cols=101 Identities=19% Similarity=0.182 Sum_probs=60.6
Q ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCceEE---------eCCCCCCccHHHHHHH
Q 019535 149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFV---------NSKNCGDKSVSQIIID 218 (339)
Q Consensus 149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~vi---------~~~~~~~~~~~~~l~~ 218 (339)
...++.+||+.|+|. |.-++-||. .|+ .|++++.++...+.+. +.+..... ...+ ..-+...+.+
T Consensus 34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~--v~~~~~D~~~ 108 (218)
T PRK13255 34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGE--ITIYCGDFFA 108 (218)
T ss_pred CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCc--eEEEECcccC
Confidence 445678999999873 777777775 799 9999999998887652 23221000 0000 0000000111
Q ss_pred hc--C-CCccEEEEcCC--------CHHHHHHHHHHhhcCCcEEEEec
Q 019535 219 MT--D-GGADYCFECVG--------LASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 219 ~~--~-g~~d~v~d~~g--------~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+. . +.||.|+|..- -...++.+.++|+++ |+++++.
T Consensus 109 l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~~ 155 (218)
T PRK13255 109 LTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLVT 155 (218)
T ss_pred CCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEEE
Confidence 11 1 26899998552 133478899999997 9766544
No 450
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.61 E-value=0.25 Score=43.74 Aligned_cols=36 Identities=39% Similarity=0.426 Sum_probs=30.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE 188 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~ 188 (339)
.+.++||.|+ |.+|...++.+...|+ +|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4578999987 8999999998888999 8999987653
No 451
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.61 E-value=0.87 Score=39.49 Aligned_cols=38 Identities=24% Similarity=0.168 Sum_probs=29.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc-CChhHH
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKF 190 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~-~~~~~~ 190 (339)
.+.++||.|+ |.+|.++++.+...|+ +|+.+. +++++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence 3678999987 8999999999999999 777764 444443
No 452
>PLN00016 RNA-binding protein; Provisional
Probab=94.60 E-value=0.44 Score=44.41 Aligned_cols=97 Identities=15% Similarity=0.119 Sum_probs=61.2
Q ss_pred CCCCEEEEE----cc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHH-----------HHhcCCceEEeCCCCCCccHHH
Q 019535 151 EVGSTVVIF----GL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-----------GKRFGVTEFVNSKNCGDKSVSQ 214 (339)
Q Consensus 151 ~~~~~VLI~----G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~-----------~~~~ga~~vi~~~~~~~~~~~~ 214 (339)
....+|||+ |+ |-+|..+++.+...|. +|+++++++..... +...|...+. .++.+
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d 121 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD 121 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH
Confidence 344689999 97 9999999998888999 99999987654221 1223443332 22222
Q ss_pred HHHHhcCC-CccEEEEcCCCH-HHHHHHHHHhhcC-CcEEEEecc
Q 019535 215 IIIDMTDG-GADYCFECVGLA-SLVQEAYACCRKG-WGKTIVLGV 256 (339)
Q Consensus 215 ~l~~~~~g-~~d~v~d~~g~~-~~~~~~~~~l~~~-~G~~v~~g~ 256 (339)
+.+.... ++|+||++.+.. .....+++.+... -.++|.++.
T Consensus 122 -~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 122 -VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred -HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 3333333 899999987643 2245566666543 136777664
No 453
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.59 E-value=0.18 Score=44.08 Aligned_cols=75 Identities=19% Similarity=0.214 Sum_probs=46.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-eEEeCCCCCCccHHHHHHHhc--CCCccEE
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGGADYC 227 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~vi~~~~~~~~~~~~~l~~~~--~g~~d~v 227 (339)
.+.++||.|+ |.+|...++.+...|+ +|+.+++++.... .-... ...|..+ .+.+.+.+.+.. .+++|++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT--AEGCAAVARAVLERLGGVDIL 81 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4678999987 8999999998888999 8999988754321 10111 1223333 122222222221 1379999
Q ss_pred EEcCC
Q 019535 228 FECVG 232 (339)
Q Consensus 228 ~d~~g 232 (339)
|+++|
T Consensus 82 i~~ag 86 (260)
T PRK06523 82 VHVLG 86 (260)
T ss_pred EECCc
Confidence 99887
No 454
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.59 E-value=0.3 Score=48.75 Aligned_cols=77 Identities=17% Similarity=0.277 Sum_probs=58.3
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 232 (339)
Q Consensus 153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g 232 (339)
..+|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...+. -+. .-.+.+++..-..+|.++-+++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa----t~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDA----TRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeC----CCHHHHHhcCCCcCCEEEEEeC
Confidence 3679999999999999999999999 899999999999999988864332 222 1122333332238999999998
Q ss_pred CHH
Q 019535 233 LAS 235 (339)
Q Consensus 233 ~~~ 235 (339)
+..
T Consensus 474 d~~ 476 (621)
T PRK03562 474 DPQ 476 (621)
T ss_pred CHH
Confidence 865
No 455
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.58 E-value=0.72 Score=41.92 Aligned_cols=39 Identities=21% Similarity=0.153 Sum_probs=34.0
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH
Q 019535 154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 193 (339)
Q Consensus 154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~ 193 (339)
.+|.|+|+|.+|...++.+...|+ +|+..+.+++..+.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 679999999999999998889999 999999988765543
No 456
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.55 E-value=0.2 Score=46.13 Aligned_cols=75 Identities=13% Similarity=0.082 Sum_probs=48.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcC--Cc-eEE--eCCCCCCccHHHHHHHhcCC-C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG--VT-EFV--NSKNCGDKSVSQIIIDMTDG-G 223 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~~g--a~-~vi--~~~~~~~~~~~~~l~~~~~g-~ 223 (339)
.+.+|||.|+ |.+|..+++.+...|. +|+++++++...... +.++ .. ..+ |..+ .+.+.++..+ +
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~------~~~~~~~~~~~~ 75 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD------AAKLRKAIAEFK 75 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC------HHHHHHHHhhcC
Confidence 3578999987 9999999999999999 899988766543221 1221 11 112 2222 2234444444 6
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|+||++++.
T Consensus 76 ~d~vih~A~~ 85 (349)
T TIGR02622 76 PEIVFHLAAQ 85 (349)
T ss_pred CCEEEECCcc
Confidence 8999998873
No 457
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=94.51 E-value=1.2 Score=39.23 Aligned_cols=101 Identities=14% Similarity=0.157 Sum_probs=63.0
Q ss_pred hcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHH----hcCCceEEeCCCCCCccHHHHHHHhcC
Q 019535 147 TANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTD 221 (339)
Q Consensus 147 ~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~~ga~~vi~~~~~~~~~~~~~l~~~~~ 221 (339)
.+.++++++||-.|+|+ |..++.++..++ ...|++++.++++.+.++ .+|...+-... .+... +.. ..
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~----~D~~~-~~~-~~ 138 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTN----FDGRV-FGA-AV 138 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEec----CCHHH-hhh-hc
Confidence 34678899999998764 555566666553 227999999999887764 35654322111 12211 111 12
Q ss_pred CCccEEE-E--cCCC-------------------------HHHHHHHHHHhhcCCcEEEEec
Q 019535 222 GGADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 222 g~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g 255 (339)
+.||.|+ | |+|. ...++.+++.++++ |+++...
T Consensus 139 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYst 199 (264)
T TIGR00446 139 PKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYST 199 (264)
T ss_pred cCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 3699997 4 4543 12577888899997 9887543
No 458
>PRK08219 short chain dehydrogenase; Provisional
Probab=94.51 E-value=0.2 Score=42.57 Aligned_cols=74 Identities=15% Similarity=0.104 Sum_probs=46.8
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCceEEeCCCCCCccHHHHHHHhcCC--CccEEEE
Q 019535 154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDG--GADYCFE 229 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-~ga~~vi~~~~~~~~~~~~~l~~~~~g--~~d~v~d 229 (339)
.++||.|+ |.+|...+..+... + +|+++++++++.+.+.+ .....++..+- .+ .+.+.+...+ ++|.+|.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDL---TD-PEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCC---CC-HHHHHHHHHhcCCCCEEEE
Confidence 57999987 89999888777666 7 89999998777655543 21122222221 12 2233333332 6999999
Q ss_pred cCCC
Q 019535 230 CVGL 233 (339)
Q Consensus 230 ~~g~ 233 (339)
++|.
T Consensus 78 ~ag~ 81 (227)
T PRK08219 78 NAGV 81 (227)
T ss_pred CCCc
Confidence 8874
No 459
>PLN02735 carbamoyl-phosphate synthase
Probab=94.51 E-value=0.55 Score=49.96 Aligned_cols=98 Identities=12% Similarity=0.159 Sum_probs=59.1
Q ss_pred hhhhhhHHHHHhcCCCCCCEEEEEccCHH-----------HHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceE-Ee
Q 019535 136 GVSTGVGAAWRTANVEVGSTVVIFGLGSI-----------GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VN 203 (339)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~VLI~G~G~i-----------G~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~v-i~ 203 (339)
....||.+.....+-..-.+|||+|+|++ |..++.-++..|+ +|+.++.++........+ ++++ +.
T Consensus 6 ~~~~~~~~~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~-~Vi~vd~np~t~~~~~~~-aD~~yi~ 83 (1102)
T PLN02735 6 TVTRAWSAATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGY-EVVLINSNPATIMTDPET-ADRTYIA 83 (1102)
T ss_pred cceecccccccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHHcCC-EEEEEeCCcccccCChhh-CcEEEeC
Confidence 34456665444333334479999999864 4557888889999 999999877432111111 3333 22
Q ss_pred CCCCCCccHHHHHHHhcCC-CccEEEEcCCCHHHHHHHH
Q 019535 204 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY 241 (339)
Q Consensus 204 ~~~~~~~~~~~~l~~~~~g-~~d~v~d~~g~~~~~~~~~ 241 (339)
..+ .+.+.++... ++|.|+-+.|+...++.+.
T Consensus 84 p~~------~e~v~~ii~~e~~D~Iip~~gg~~gl~la~ 116 (1102)
T PLN02735 84 PMT------PELVEQVIAKERPDALLPTMGGQTALNLAV 116 (1102)
T ss_pred CCC------HHHHHHHHHHhCCCEEEECCCchhhHHHHH
Confidence 222 2334444434 8999999888766454443
No 460
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.50 E-value=0.54 Score=40.38 Aligned_cols=70 Identities=13% Similarity=0.202 Sum_probs=49.6
Q ss_pred EEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh--HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 019535 156 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 232 (339)
Q Consensus 156 VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g 232 (339)
|+|.|+ |.+|...++.+...+. +|.++.|+.. ..+.++..|+..+ ..+- +-.+.+.+... ++|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~----~~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY----DDPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T----T-HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc----CCHHHHHHHHc-CCceEEeecC
Confidence 789987 9999999999999888 8999998763 3555677888544 3332 22333443333 6999998888
No 461
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.50 E-value=0.42 Score=42.77 Aligned_cols=93 Identities=18% Similarity=0.259 Sum_probs=64.2
Q ss_pred cccchhhhhhHHHHHhcCC-CCCCEEEEEc-cCHHHHHHHHHHHHcCCCEEEEEc-CChhHHHHHHhcCCceEEeCCCCC
Q 019535 132 LLSCGVSTGVGAAWRTANV-EVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVD-VISEKFEIGKRFGVTEFVNSKNCG 208 (339)
Q Consensus 132 ~l~~~~~ta~~al~~~~~~-~~~~~VLI~G-~G~iG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~~~~ga~~vi~~~~~~ 208 (339)
.+||.....+. +++..++ -.|.+|+|+| .+.+|.-.+.++...|+ .|++.. +++
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~--------------------- 193 (296)
T PRK14188 137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR--------------------- 193 (296)
T ss_pred CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence 45654333333 4444443 4689999999 58999999999999999 888874 332
Q ss_pred CccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 209 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 209 ~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
++.+.++ ..|+|+-++|.+..++..+ ++++ ..++++|..
T Consensus 194 --~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 194 --DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred --CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 1111111 3799999999988666554 8886 888888864
No 462
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=94.49 E-value=0.57 Score=42.14 Aligned_cols=89 Identities=17% Similarity=0.181 Sum_probs=56.7
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 234 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~ 234 (339)
+|.|+|.|.+|...++.+...|. +|++.++++++.+.+++.|.... . +..+....+ ...|+||-++...
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~~~~---~-----s~~~~~~~~--~~~dvIi~~vp~~ 70 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRTTGV---A-----NLRELSQRL--SAPRVVWVMVPHG 70 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCccc---C-----CHHHHHhhc--CCCCEEEEEcCch
Confidence 58899999999988888888898 89999999999888877664321 1 111111111 1468888887765
Q ss_pred HHHHH----HHHHhhcCCcEEEEecc
Q 019535 235 SLVQE----AYACCRKGWGKTIVLGV 256 (339)
Q Consensus 235 ~~~~~----~~~~l~~~~G~~v~~g~ 256 (339)
. .+. +...+.++ -.++..+.
T Consensus 71 ~-~~~v~~~l~~~l~~g-~ivid~st 94 (298)
T TIGR00872 71 I-VDAVLEELAPTLEKG-DIVIDGGN 94 (298)
T ss_pred H-HHHHHHHHHhhCCCC-CEEEECCC
Confidence 3 333 33344443 44555443
No 463
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.49 E-value=0.31 Score=48.04 Aligned_cols=76 Identities=11% Similarity=0.187 Sum_probs=56.3
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535 154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 233 (339)
Q Consensus 154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~ 233 (339)
++++|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...+.- +. .-.+.+++..-..+|.++-++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~----~~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NA----ANEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CC----CCHHHHHhcCccccCEEEEEcCC
Confidence 678999999999999999999999 8999999999999999888654432 22 11233333322378988877665
Q ss_pred HH
Q 019535 234 AS 235 (339)
Q Consensus 234 ~~ 235 (339)
..
T Consensus 492 ~~ 493 (558)
T PRK10669 492 GY 493 (558)
T ss_pred hH
Confidence 43
No 464
>PRK12335 tellurite resistance protein TehB; Provisional
Probab=94.48 E-value=0.083 Score=47.29 Aligned_cols=91 Identities=13% Similarity=0.187 Sum_probs=57.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCc-eEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT-EFVNSKNCGDKSVSQIIIDMTDGGADY 226 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~----ga~-~vi~~~~~~~~~~~~~l~~~~~g~~d~ 226 (339)
++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++. +.. .+.. .++.+. . ..+.+|+
T Consensus 120 ~~~~vLDlGcG~-G~~~~~la~-~g~-~V~avD~s~~ai~~~~~~~~~~~l~v~~~~------~D~~~~--~-~~~~fD~ 187 (287)
T PRK12335 120 KPGKALDLGCGQ-GRNSLYLAL-LGF-DVTAVDINQQSLENLQEIAEKENLNIRTGL------YDINSA--S-IQEEYDF 187 (287)
T ss_pred CCCCEEEeCCCC-CHHHHHHHH-CCC-EEEEEECCHHHHHHHHHHHHHcCCceEEEE------echhcc--c-ccCCccE
Confidence 456899998863 666666666 488 999999999887776542 321 1111 111110 1 1337999
Q ss_pred EEEcCC--------CHHHHHHHHHHhhcCCcEEEEec
Q 019535 227 CFECVG--------LASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 227 v~d~~g--------~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
|+...- -...++.+.+.++++ |.++.+.
T Consensus 188 I~~~~vl~~l~~~~~~~~l~~~~~~Lkpg-G~~l~v~ 223 (287)
T PRK12335 188 ILSTVVLMFLNRERIPAIIKNMQEHTNPG-GYNLIVC 223 (287)
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 986431 133477888899997 9866654
No 465
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.47 E-value=0.34 Score=46.78 Aligned_cols=69 Identities=28% Similarity=0.291 Sum_probs=48.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-----HHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-----KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 226 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~-----~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~ 226 (339)
.+++|+|+|+|.+|+.++.+++..|. +|++++..+. ..+.+++.|......... . ....+|+
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~---------~~~~~D~ 81 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T---------LPEDTDL 81 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c---------ccCCCCE
Confidence 46789999999999999999999999 8998875542 234456677654443222 1 0115788
Q ss_pred EEEcCCC
Q 019535 227 CFECVGL 233 (339)
Q Consensus 227 v~d~~g~ 233 (339)
|+-+.|-
T Consensus 82 Vv~s~Gi 88 (480)
T PRK01438 82 VVTSPGW 88 (480)
T ss_pred EEECCCc
Confidence 8877765
No 466
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.47 E-value=0.31 Score=42.79 Aligned_cols=79 Identities=23% Similarity=0.411 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-e--EEeCCCCCCccHHHHHHHhcC--
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-E--FVNSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~--vi~~~~~~~~~~~~~l~~~~~-- 221 (339)
.+.++||.|+ +.+|...+..+...|+ +|+.+.+++++.+.+ ++.+.. . ..|..+ ...+.+.+.+...
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD--EDGVQAMVSQIEKEV 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 4678999987 8999999988888999 888888887665443 223432 1 233333 1222222222221
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|++.|.
T Consensus 86 ~~id~li~~ag~ 97 (265)
T PRK07097 86 GVIDILVNNAGI 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 368999998874
No 467
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=94.47 E-value=0.52 Score=44.57 Aligned_cols=73 Identities=25% Similarity=0.338 Sum_probs=51.7
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHh---------cCC-C
Q 019535 154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM---------TDG-G 223 (339)
Q Consensus 154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~---------~~g-~ 223 (339)
.+|.|+|.|-+|...+..+...|. +|+++++++++.+.++. |...+ .+ ..+.+.+++. +.- .
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~~---~e---~~l~~~l~~~~~~g~l~~~~~~~~ 75 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIHI---VE---PDLDMVVKTAVEGGYLRATTTPEP 75 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCCc---CC---CCHHHHHHHHhhcCceeeeccccc
Confidence 479999999999999888888899 99999999998887653 32221 22 3333333321 111 5
Q ss_pred ccEEEEcCCCH
Q 019535 224 ADYCFECVGLA 234 (339)
Q Consensus 224 ~d~v~d~~g~~ 234 (339)
.|++|-|++.+
T Consensus 76 aDvvii~vptp 86 (415)
T PRK11064 76 ADAFLIAVPTP 86 (415)
T ss_pred CCEEEEEcCCC
Confidence 89999999985
No 468
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.45 E-value=0.77 Score=41.36 Aligned_cols=43 Identities=26% Similarity=0.326 Sum_probs=37.0
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga 198 (339)
+|.++|.|.+|...++-+...|. +|++.++++++.+.+.+.|+
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~ 44 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGA 44 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCC
Confidence 58899999999988888888899 89999999988887777664
No 469
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.45 E-value=0.36 Score=43.04 Aligned_cols=79 Identities=22% Similarity=0.233 Sum_probs=48.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh---------hHHHHH----HhcCCc-eE--EeCCCCCCccHHH
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS---------EKFEIG----KRFGVT-EF--VNSKNCGDKSVSQ 214 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~---------~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~ 214 (339)
.+.++||.|+ +++|.+.++.+...|+ +|+.++++. ++.+.+ +..+.. .. .|..+ .++..+
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~v~~ 81 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD--WDGAAN 81 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC--HHHHHH
Confidence 5788999987 8999999998888999 888877653 332222 222322 12 23332 223333
Q ss_pred HHHHhcC--CCccEEEEcCCC
Q 019535 215 IIIDMTD--GGADYCFECVGL 233 (339)
Q Consensus 215 ~l~~~~~--g~~d~v~d~~g~ 233 (339)
.+.+... +.+|++|++.|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 3333221 479999998874
No 470
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.44 E-value=0.3 Score=42.03 Aligned_cols=79 Identities=25% Similarity=0.297 Sum_probs=47.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HHH----HHhcCCc-eEE--eCCCCCCccHHHHHHHhcC-
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~-~~~----~~~~ga~-~vi--~~~~~~~~~~~~~l~~~~~- 221 (339)
.+.++||.|+ |.+|...+..+...|+ +|+++.+++.. .+. ++..+.. .++ |..+ .+.+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3468999987 9999999999988999 78676665442 221 2222322 222 3332 2223333333322
Q ss_pred -CCccEEEEcCCC
Q 019535 222 -GGADYCFECVGL 233 (339)
Q Consensus 222 -g~~d~v~d~~g~ 233 (339)
+++|.+|.++|.
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 368999998864
No 471
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=94.44 E-value=0.27 Score=44.99 Aligned_cols=99 Identities=17% Similarity=0.176 Sum_probs=63.0
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
.++.+||-+|+|. |..+..+++..+..++++++.+++..+.+++.....-+.... .+..+ + ....+.||+|+.+
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~---gD~e~-l-p~~~~sFDvVIs~ 185 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE---GDAED-L-PFPTDYADRYVSA 185 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe---ccHHh-C-CCCCCceeEEEEc
Confidence 4578999999875 777778887765448999999988887776532110011111 12211 0 1112369998853
Q ss_pred C-----C-CHHHHHHHHHHhhcCCcEEEEecc
Q 019535 231 V-----G-LASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 231 ~-----g-~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
. . ....++++.+.|+++ |++++++.
T Consensus 186 ~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 186 GSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred ChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 2 1 234588999999998 99988754
No 472
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=94.42 E-value=0.56 Score=42.16 Aligned_cols=71 Identities=23% Similarity=0.299 Sum_probs=49.9
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCCH
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 234 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~~ 234 (339)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+... .+..+.++ ..|+||-|+...
T Consensus 3 ~Ig~IGlG~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~g~~~~--------~s~~~~~~-----~aDvVi~~vp~~ 68 (296)
T PRK15461 3 AIAFIGLGQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDKGATPA--------ASPAQAAA-----GAEFVITMLPNG 68 (296)
T ss_pred eEEEEeeCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHcCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence 68899999999988888888898 89999999998888776664211 12222221 357888777766
Q ss_pred HHHHH
Q 019535 235 SLVQE 239 (339)
Q Consensus 235 ~~~~~ 239 (339)
..++.
T Consensus 69 ~~~~~ 73 (296)
T PRK15461 69 DLVRS 73 (296)
T ss_pred HHHHH
Confidence 43333
No 473
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.42 E-value=0.49 Score=39.75 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=30.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~ 186 (339)
...+|+|+|+|++|.-.+..+-..|.+++..++.+
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 35689999999999999999999999888888754
No 474
>PRK14030 glutamate dehydrogenase; Provisional
Probab=94.42 E-value=1.6 Score=41.39 Aligned_cols=31 Identities=32% Similarity=0.547 Sum_probs=28.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEE
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 183 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~ 183 (339)
.+.+|+|+|-|.+|+.+++++...|+ +|+++
T Consensus 227 ~g~~vaIQGfGnVG~~aA~~L~e~Ga-kvVav 257 (445)
T PRK14030 227 KGKTVAISGFGNVAWGAATKATELGA-KVVTI 257 (445)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEE
Confidence 58899999999999999999999999 88884
No 475
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.40 E-value=0.29 Score=42.17 Aligned_cols=78 Identities=23% Similarity=0.336 Sum_probs=47.8
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-cCChhHHHHHHh----cCCc-eEE--eCCCCCCccHHHHHHHhcC--
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 221 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~~~----~ga~-~vi--~~~~~~~~~~~~~l~~~~~-- 221 (339)
+.++||.|+ |.+|...+..+...|+ +|+.+ .+++++.+.+.. .+.. .++ |..+ .+.+.+.+.+...
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS--EEDVENLVEQIVEKF 81 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 468999987 9999999988888899 88888 877665543322 2221 222 2222 1222232322221
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (247)
T PRK05565 82 GKIDILVNNAGI 93 (247)
T ss_pred CCCCEEEECCCc
Confidence 369999998864
No 476
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=94.40 E-value=0.15 Score=38.54 Aligned_cols=93 Identities=25% Similarity=0.364 Sum_probs=57.6
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC---ceEEeCCCCCCccHHHHHHHhcCCCcc
Q 019535 153 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV---TEFVNSKNCGDKSVSQIIIDMTDGGAD 225 (339)
Q Consensus 153 ~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----~ga---~~vi~~~~~~~~~~~~~l~~~~~g~~d 225 (339)
|.+||..|+|. |..++.+++.... ++++++.++...+.++. .+. ..++. .++.+....+..+.+|
T Consensus 1 g~~vlD~~~G~-G~~~~~~~~~~~~-~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~------~D~~~~~~~~~~~~~D 72 (117)
T PF13659_consen 1 GDRVLDPGCGS-GTFLLAALRRGAA-RVTGVDIDPEAVELARRNLPRNGLDDRVEVIV------GDARDLPEPLPDGKFD 72 (117)
T ss_dssp TEEEEEETSTT-CHHHHHHHHHCTC-EEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE------SHHHHHHHTCTTT-EE
T ss_pred CCEEEEcCcch-HHHHHHHHHHCCC-eEEEEEECHHHHHHHHHHHHHccCCceEEEEE------CchhhchhhccCceeE
Confidence 45788887642 4455555554434 99999999998887764 232 12222 4554444334344999
Q ss_pred EEEEcCCC--------------HHHHHHHHHHhhcCCcEEEEe
Q 019535 226 YCFECVGL--------------ASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 226 ~v~d~~g~--------------~~~~~~~~~~l~~~~G~~v~~ 254 (339)
+|+-.-+- ...++.+.+.|+++ |.++.+
T Consensus 73 ~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~ 114 (117)
T PF13659_consen 73 LIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI 114 (117)
T ss_dssp EEEE--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEEECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 99853221 23478999999997 988776
No 477
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=94.40 E-value=0.55 Score=40.32 Aligned_cols=104 Identities=17% Similarity=0.288 Sum_probs=65.7
Q ss_pred HhcCCCCCCEEEEEccCHHHHHHHHHHHHcC--CCEEEEEcCChhHHHHHHhcCC----ceEEeCCCCCCccHHHHHHHh
Q 019535 146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKRFGV----TEFVNSKNCGDKSVSQIIIDM 219 (339)
Q Consensus 146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G--~~~Vi~~~~~~~~~~~~~~~ga----~~vi~~~~~~~~~~~~~l~~~ 219 (339)
......++.+||.+|+|. |..+..+++..+ . ++++++.+++..+.+++.-. ...++... .+..+. ..
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~--~~ 117 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTG-EVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ---GDAEAL--PF 117 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHHhhcccccccCeEEEe---cccccC--CC
Confidence 344556778999999876 788888888775 5 99999999888777765321 11111111 111110 11
Q ss_pred cCCCccEEEEcC------CCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 220 TDGGADYCFECV------GLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 220 ~~g~~d~v~d~~------g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
..+.+|+|+... .-...++.+.+.|+++ |.++.+...
T Consensus 118 ~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~~ 160 (239)
T PRK00216 118 PDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEFS 160 (239)
T ss_pred CCCCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEec
Confidence 123689987422 1234478889999998 998887653
No 478
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=94.38 E-value=0.22 Score=47.93 Aligned_cols=104 Identities=15% Similarity=0.185 Sum_probs=66.1
Q ss_pred HHhcCCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc--CCceEEeCCCCCCccHHHHHHHhcCC
Q 019535 145 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF--GVTEFVNSKNCGDKSVSQIIIDMTDG 222 (339)
Q Consensus 145 ~~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~--ga~~vi~~~~~~~~~~~~~l~~~~~g 222 (339)
.+...++++.+||-+|+|. |..+..+++..++ +|++++.+++..+.+++. +...-+.... .++.+ ..+..+
T Consensus 259 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~---~d~~~--~~~~~~ 331 (475)
T PLN02336 259 VDKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEV---ADCTK--KTYPDN 331 (475)
T ss_pred HHhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEE---cCccc--CCCCCC
Confidence 3445567788999999864 6666778887788 999999999888877542 2110011111 11111 011123
Q ss_pred CccEEEEcC-----C-CHHHHHHHHHHhhcCCcEEEEecc
Q 019535 223 GADYCFECV-----G-LASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 223 ~~d~v~d~~-----g-~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
.||+|+... . ....++.+.+.|+++ |+++....
T Consensus 332 ~fD~I~s~~~l~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~ 370 (475)
T PLN02336 332 SFDVIYSRDTILHIQDKPALFRSFFKWLKPG-GKVLISDY 370 (475)
T ss_pred CEEEEEECCcccccCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence 699998532 1 234588999999998 99887653
No 479
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.35 E-value=0.41 Score=44.45 Aligned_cols=35 Identities=20% Similarity=0.314 Sum_probs=31.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~ 186 (339)
...+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 35689999999999999999999999888888765
No 480
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=94.33 E-value=0.65 Score=41.94 Aligned_cols=87 Identities=25% Similarity=0.281 Sum_probs=58.3
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
-.+.+|.|+|-|.+|.+.++.++..|. +|++..+.....+.++..|+. +. ++.+.++ ..|+|+-+
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~--------sl~Eaak-----~ADVV~ll 78 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM--------SVSEAVR-----TAQVVQML 78 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC--------CHHHHHh-----cCCEEEEe
Confidence 357899999999999999999999999 888876655555556666653 21 2233332 37999988
Q ss_pred CCCHHH---H-HHHHHHhhcCCcEEEEe
Q 019535 231 VGLASL---V-QEAYACCRKGWGKTIVL 254 (339)
Q Consensus 231 ~g~~~~---~-~~~~~~l~~~~G~~v~~ 254 (339)
.+.+.. + +..+..|+++ .++.+
T Consensus 79 LPd~~t~~V~~~eil~~MK~G--aiL~f 104 (335)
T PRK13403 79 LPDEQQAHVYKAEVEENLREG--QMLLF 104 (335)
T ss_pred CCChHHHHHHHHHHHhcCCCC--CEEEE
Confidence 876442 2 2345556664 44444
No 481
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.32 E-value=0.32 Score=42.14 Aligned_cols=79 Identities=16% Similarity=0.160 Sum_probs=47.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEE-EcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhcC-
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMTD- 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~-~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~~- 221 (339)
.+.++||.|+ |.+|+.+++.+...|+ +|+. ..++.++.+.+ +..+.. .+ .|..+ ..++...+.+...
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 79 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD--VEKIKEMFAQIDEE 79 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3578999987 8999999999999999 7665 45555543332 333432 22 23222 2223333333221
Q ss_pred -CCccEEEEcCCC
Q 019535 222 -GGADYCFECVGL 233 (339)
Q Consensus 222 -g~~d~v~d~~g~ 233 (339)
+++|++|++.|.
T Consensus 80 ~~~id~vi~~ag~ 92 (250)
T PRK08063 80 FGRLDVFVNNAAS 92 (250)
T ss_pred cCCCCEEEECCCC
Confidence 368999998873
No 482
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.32 E-value=0.33 Score=48.20 Aligned_cols=93 Identities=10% Similarity=0.089 Sum_probs=64.9
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcCCC
Q 019535 154 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 233 (339)
Q Consensus 154 ~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g~ 233 (339)
.+|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ -+. .-.+.+++..-..+|.++-+.++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa----t~~~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDA----TQLELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeC----CCHHHHHhcCCccCCEEEEEeCC
Confidence 579999999999999999999999 899999999999999998865433 222 11223333322389999999988
Q ss_pred HHHHHHH---HHHhhcCCcEEEE
Q 019535 234 ASLVQEA---YACCRKGWGKTIV 253 (339)
Q Consensus 234 ~~~~~~~---~~~l~~~~G~~v~ 253 (339)
...-... .+...++ -+++.
T Consensus 475 ~~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 475 PEDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred HHHHHHHHHHHHHHCCC-CeEEE
Confidence 6633233 3334454 45444
No 483
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.27 E-value=0.35 Score=43.69 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=29.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 186 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~ 186 (339)
.+.++||.|+ +++|.++++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4678999987 8999999999999999 89988876
No 484
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=94.27 E-value=1.2 Score=42.30 Aligned_cols=35 Identities=26% Similarity=0.321 Sum_probs=30.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 186 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~ 186 (339)
-.+.+|+|.|.|.+|+.+++.+..+|+ +|++++.+
T Consensus 235 l~Gk~VaVqG~GnVg~~aa~~L~e~Ga-kVVavSD~ 269 (454)
T PTZ00079 235 LEGKTVVVSGSGNVAQYAVEKLLQLGA-KVLTMSDS 269 (454)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEcC
Confidence 368899999999999999999999999 88855543
No 485
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.26 E-value=0.3 Score=45.78 Aligned_cols=105 Identities=15% Similarity=0.208 Sum_probs=61.3
Q ss_pred CCCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHH-------HHHhc-CCceE-EeCCCCCCccHHHHHHH
Q 019535 149 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-------IGKRF-GVTEF-VNSKNCGDKSVSQIIID 218 (339)
Q Consensus 149 ~~~~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~-------~~~~~-ga~~v-i~~~~~~~~~~~~~l~~ 218 (339)
+...+.+|||.|+ |.+|..+++.+...|. +|++++++..+.+ ..+.. ++..+ .|..+ .+.+.+.++.
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~~ 132 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLFS 132 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHHH
Confidence 3456789999987 9999999998888999 8999998764321 11112 23222 33333 1222222222
Q ss_pred hcCCCccEEEEcCCCH------------HHHHHHHHHhhcC-CcEEEEeccC
Q 019535 219 MTDGGADYCFECVGLA------------SLVQEAYACCRKG-WGKTIVLGVD 257 (339)
Q Consensus 219 ~~~g~~d~v~d~~g~~------------~~~~~~~~~l~~~-~G~~v~~g~~ 257 (339)
. +.++|+||+|.+.. .....+++.+... -+++|.++..
T Consensus 133 ~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 133 E-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred h-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 1 11699999988632 1122344444432 1478887754
No 486
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.25 E-value=0.72 Score=35.54 Aligned_cols=91 Identities=22% Similarity=0.343 Sum_probs=48.3
Q ss_pred EEEEEcc-CHHHHHHHHHHHH-cCCCEEEEE-cCChhH---HHHHHhcCC--ceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535 155 TVVIFGL-GSIGLAVAEGARL-CGATRIIGV-DVISEK---FEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDGGADY 226 (339)
Q Consensus 155 ~VLI~G~-G~iG~~a~~la~~-~G~~~Vi~~-~~~~~~---~~~~~~~ga--~~vi~~~~~~~~~~~~~l~~~~~g~~d~ 226 (339)
+|+|+|+ |-+|+..++.+.. .+. ++++. ++++.. .+...-.|. ..+..+ .++ .+.... +|+
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~-~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~-----~~l----~~~~~~-~DV 70 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGF-ELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT-----DDL----EELLEE-ADV 70 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTE-EEEEEEETTTSTTTTSBCHHHCTSST-SSBEB-----S-H----HHHTTH--SE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCc-EEEEEEecCCcccccchhhhhhCcCCcccccc-----hhH----HHhccc-CCE
Confidence 5899998 9999999999988 577 54444 443311 111111111 111111 122 222222 899
Q ss_pred EEEcCCCHHHHHHHHHHhhcCCcEEEEeccCC
Q 019535 227 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 258 (339)
Q Consensus 227 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 258 (339)
+||++. +......++.+... |.-+.+|.+.
T Consensus 71 vIDfT~-p~~~~~~~~~~~~~-g~~~ViGTTG 100 (124)
T PF01113_consen 71 VIDFTN-PDAVYDNLEYALKH-GVPLVIGTTG 100 (124)
T ss_dssp EEEES--HHHHHHHHHHHHHH-T-EEEEE-SS
T ss_pred EEEcCC-hHHhHHHHHHHHhC-CCCEEEECCC
Confidence 999994 44455555555554 7777787653
No 487
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.25 E-value=0.19 Score=43.53 Aligned_cols=78 Identities=17% Similarity=0.150 Sum_probs=46.4
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-Chh-HHHHH---HhcCCceE---EeCCCCCCccHHHHHHHhc--C
Q 019535 153 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISE-KFEIG---KRFGVTEF---VNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 153 ~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~-~~~-~~~~~---~~~ga~~v---i~~~~~~~~~~~~~l~~~~--~ 221 (339)
+.++||.|+ |.+|...++.+...|+ +|+.+.. +.. ..+.+ +..+.... .|..+ .+++.+.+.+.. .
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD--WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 567899987 9999999999999999 7777543 222 22222 33343322 23333 122222222221 1
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+++|+++++.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 479999999875
No 488
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.23 E-value=0.56 Score=42.84 Aligned_cols=86 Identities=27% Similarity=0.194 Sum_probs=57.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 231 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~ 231 (339)
.+.+|.|+|.|.+|...++.++..|. +|++.+++++..... +... .++.+.+. ..|+|+-+.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~--------~~~~----~~l~ell~-----~aDiVil~l 206 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF--------LTYK----DSVKEAIK-----DADIISLHV 206 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh--------hhcc----CCHHHHHh-----cCCEEEEeC
Confidence 46789999999999999999999999 999999876543210 0011 12322222 368888877
Q ss_pred CCHH-----HHHHHHHHhhcCCcEEEEecc
Q 019535 232 GLAS-----LVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 232 g~~~-----~~~~~~~~l~~~~G~~v~~g~ 256 (339)
+... .....+..++++ ..+|.++.
T Consensus 207 P~t~~t~~li~~~~l~~mk~g-avlIN~aR 235 (330)
T PRK12480 207 PANKESYHLFDKAMFDHVKKG-AILVNAAR 235 (330)
T ss_pred CCcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence 7542 133555677776 66666653
No 489
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=94.20 E-value=0.2 Score=44.36 Aligned_cols=131 Identities=17% Similarity=0.147 Sum_probs=85.2
Q ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCceEEeCCCC--------CCccHHHHHHHhc
Q 019535 149 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC--------GDKSVSQIIIDMT 220 (339)
Q Consensus 149 ~~~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~vi~~~~~--------~~~~~~~~l~~~~ 220 (339)
+-.++.++|+.|.|..|++++..++..|+ -|...+..+.+.+..+.+|+...--.++. -++++.++-.++.
T Consensus 160 gtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~ 238 (356)
T COG3288 160 GTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELV 238 (356)
T ss_pred ccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHH
Confidence 34466789999999999999999999999 78887777777777777775432111110 0122333222222
Q ss_pred -C--CCccEEEEcC--CC----HHHHHHHHHHhhcCCcEEEEeccCCCCCcc-cccHHHHhhcCCeEEeee
Q 019535 221 -D--GGADYCFECV--GL----ASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEVLHSGKILMGSL 281 (339)
Q Consensus 221 -~--g~~d~v~d~~--g~----~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~i~~~~ 281 (339)
. .++|+||-+. ++ ....+.+.+.+.++ ..+|++....++..- ..+-.....+++++.|..
T Consensus 239 a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 239 AEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 2 2799999865 22 23367899999998 999999876655422 222222334568888764
No 490
>PRK05855 short chain dehydrogenase; Validated
Probab=94.20 E-value=0.26 Score=48.44 Aligned_cols=79 Identities=20% Similarity=0.243 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-eE--EeCCCCCCccHHHHHHHhc--C
Q 019535 152 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMT--D 221 (339)
Q Consensus 152 ~~~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~ 221 (339)
.+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. ..|.. .+ .|..+ .+.+.+.+.+.. .
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD--ADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 3578999987 9999999998889999 8999999877665432 23432 22 33333 223333333322 2
Q ss_pred CCccEEEEcCCC
Q 019535 222 GGADYCFECVGL 233 (339)
Q Consensus 222 g~~d~v~d~~g~ 233 (339)
+.+|++|+++|.
T Consensus 391 g~id~lv~~Ag~ 402 (582)
T PRK05855 391 GVPDIVVNNAGI 402 (582)
T ss_pred CCCcEEEECCcc
Confidence 379999998875
No 491
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=94.14 E-value=0.54 Score=42.75 Aligned_cols=94 Identities=18% Similarity=0.308 Sum_probs=60.1
Q ss_pred EEEEEccCHHHHHHHHHHHHcC----CCEEEEEcC--ChhHHHHHHhcCC--------------------c--eEEeCCC
Q 019535 155 TVVIFGLGSIGLAVAEGARLCG----ATRIIGVDV--ISEKFEIGKRFGV--------------------T--EFVNSKN 206 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G----~~~Vi~~~~--~~~~~~~~~~~ga--------------------~--~vi~~~~ 206 (339)
+|.|.|.|.+|+..++.+...+ . +|+.+.. +++...++.+++. . .++..++
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999887653 5 6666653 2333344433221 0 1121111
Q ss_pred CCCccHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhhcCCcEEEEeccC
Q 019535 207 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 257 (339)
Q Consensus 207 ~~~~~~~~~l~~~~~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 257 (339)
. +.+ .+...++|+||+|+|.....+.+...+..+ .+.|+++.+
T Consensus 80 -----p-~~~-~w~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP 122 (325)
T TIGR01532 80 -----P-EAL-PWRALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHP 122 (325)
T ss_pred -----h-hhc-cccccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCC
Confidence 1 111 122228999999999988788888899986 888888764
No 492
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase
Probab=94.13 E-value=0.23 Score=45.08 Aligned_cols=96 Identities=22% Similarity=0.257 Sum_probs=59.8
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC----CceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535 151 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG----VTEFVNSKNCGDKSVSQIIIDMTDGGADY 226 (339)
Q Consensus 151 ~~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~g----a~~vi~~~~~~~~~~~~~l~~~~~g~~d~ 226 (339)
.++.+||-+|+|. |..+..+++ .|+ +|++++.+++..+.++... ...-+.+.. .+. +.+. ...+.||+
T Consensus 130 ~~g~~ILDIGCG~-G~~s~~La~-~g~-~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~---~da-e~l~-~~~~~FD~ 201 (322)
T PLN02396 130 FEGLKFIDIGCGG-GLLSEPLAR-MGA-TVTGVDAVDKNVKIARLHADMDPVTSTIEYLC---TTA-EKLA-DEGRKFDA 201 (322)
T ss_pred CCCCEEEEeeCCC-CHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHhcCcccceeEEe---cCH-HHhh-hccCCCCE
Confidence 4677899998863 555556654 588 9999999999988886421 100111111 121 1111 12237999
Q ss_pred EEEc-----CC-CHHHHHHHHHHhhcCCcEEEEec
Q 019535 227 CFEC-----VG-LASLVQEAYACCRKGWGKTIVLG 255 (339)
Q Consensus 227 v~d~-----~g-~~~~~~~~~~~l~~~~G~~v~~g 255 (339)
|+.. +. -...++.+.++|+++ |.+++.-
T Consensus 202 Vi~~~vLeHv~d~~~~L~~l~r~LkPG-G~liist 235 (322)
T PLN02396 202 VLSLEVIEHVANPAEFCKSLSALTIPN-GATVLST 235 (322)
T ss_pred EEEhhHHHhcCCHHHHHHHHHHHcCCC-cEEEEEE
Confidence 9842 22 244588999999997 9887764
No 493
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.12 E-value=0.69 Score=41.64 Aligned_cols=43 Identities=30% Similarity=0.578 Sum_probs=36.6
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC
Q 019535 155 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 198 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga 198 (339)
+|.++|.|.+|...++-+...|. +|++.++++++.+.+++.|+
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~ 44 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGI 44 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCC
Confidence 57889999999988888888898 89999999888887777664
No 494
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.10 E-value=0.69 Score=42.84 Aligned_cols=94 Identities=22% Similarity=0.251 Sum_probs=61.7
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHc--CCCEEEEEc--CChhH-HHHHHhcCCceEEeCCCCCCccHHH-------------
Q 019535 154 STVVIFGL-GSIGLAVAEGARLC--GATRIIGVD--VISEK-FEIGKRFGVTEFVNSKNCGDKSVSQ------------- 214 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~--G~~~Vi~~~--~~~~~-~~~~~~~ga~~vi~~~~~~~~~~~~------------- 214 (339)
++|.|+|+ |.+|..++...+.. .+ +|++++ ++.++ .+.+++++...+.-.++ ...+
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~----~~~~~l~~~l~~~~~~v 76 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADE----EAAKELKEALAAAGIEV 76 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHhhccCCceE
Confidence 47899995 99999999988765 56 777775 33333 34456677766554433 2122
Q ss_pred -----HHHHhcCC-CccEEEEcCCCHHHHHHHHHHhhcCCcEEEEe
Q 019535 215 -----IIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 215 -----~l~~~~~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 254 (339)
.+.++... .+|+|+.++++...+.-.+.++..+ +-|.+
T Consensus 77 ~~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG--K~VaL 120 (385)
T PRK05447 77 LAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG--KRIAL 120 (385)
T ss_pred EEChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC--CcEEE
Confidence 22233333 6899999998876678888888874 44555
No 495
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=94.10 E-value=0.058 Score=38.80 Aligned_cols=86 Identities=23% Similarity=0.373 Sum_probs=54.1
Q ss_pred EEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCce---EEeCCCCCCccHHHHHHHhcCCCccEEEEcCC-
Q 019535 157 VIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE---FVNSKNCGDKSVSQIIIDMTDGGADYCFECVG- 232 (339)
Q Consensus 157 LI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~~ga~~---vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~~g- 232 (339)
|-+|+| .|..+..+++.-+. ++++++.+++..+.+++..... +...+. .++ ...++.+|+|+....
T Consensus 1 LdiG~G-~G~~~~~l~~~~~~-~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~---~~l-----~~~~~sfD~v~~~~~~ 70 (95)
T PF08241_consen 1 LDIGCG-TGRFAAALAKRGGA-SVTGIDISEEMLEQARKRLKNEGVSFRQGDA---EDL-----PFPDNSFDVVFSNSVL 70 (95)
T ss_dssp EEET-T-TSHHHHHHHHTTTC-EEEEEES-HHHHHHHHHHTTTSTEEEEESBT---TSS-----SS-TT-EEEEEEESHG
T ss_pred CEecCc-CCHHHHHHHhccCC-EEEEEeCCHHHHHHHHhcccccCchheeehH---HhC-----ccccccccccccccce
Confidence 345766 58888888888455 9999999999888887744221 222222 111 222237999985332
Q ss_pred -----CHHHHHHHHHHhhcCCcEEEE
Q 019535 233 -----LASLVQEAYACCRKGWGKTIV 253 (339)
Q Consensus 233 -----~~~~~~~~~~~l~~~~G~~v~ 253 (339)
-...++++.+.|+++ |+++.
T Consensus 71 ~~~~~~~~~l~e~~rvLk~g-G~l~~ 95 (95)
T PF08241_consen 71 HHLEDPEAALREIYRVLKPG-GRLVI 95 (95)
T ss_dssp GGSSHHHHHHHHHHHHEEEE-EEEEE
T ss_pred eeccCHHHHHHHHHHHcCcC-eEEeC
Confidence 234588999999997 98864
No 496
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=94.10 E-value=0.51 Score=45.04 Aligned_cols=102 Identities=18% Similarity=0.296 Sum_probs=62.4
Q ss_pred HhcCCCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHh----cCCceEEeCCCCCCccHHHHHHHhc
Q 019535 146 RTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT 220 (339)
Q Consensus 146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~----~ga~~vi~~~~~~~~~~~~~l~~~~ 220 (339)
....++++++||-+|+|+ |..++.+++.. +..+|++++.++++.+.+++ +|...+ .... .+..+....+
T Consensus 244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v-~~~~---~D~~~~~~~~- 317 (444)
T PRK14902 244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNI-ETKA---LDARKVHEKF- 317 (444)
T ss_pred HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeE-EEEe---CCcccccchh-
Confidence 455678889999998754 55555666655 22389999999988777643 565432 1111 1221111111
Q ss_pred CCCccEEE-E--cCCC-------------------------HHHHHHHHHHhhcCCcEEEEe
Q 019535 221 DGGADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVL 254 (339)
Q Consensus 221 ~g~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~ 254 (339)
.+.||.|+ | |+|. ...++.+++.|+++ |+++..
T Consensus 318 ~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvys 378 (444)
T PRK14902 318 AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKG-GILVYS 378 (444)
T ss_pred cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence 13699997 4 4432 12477888999997 998754
No 497
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=94.08 E-value=1.5 Score=41.73 Aligned_cols=102 Identities=19% Similarity=0.284 Sum_probs=64.8
Q ss_pred HhcCCCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCce--EEeCCCCCCccHHHHHHH
Q 019535 146 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID 218 (339)
Q Consensus 146 ~~~~~~~~~~VLI~G~G~iG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----~ga~~--vi~~~~~~~~~~~~~l~~ 218 (339)
...+++++++||-.|+|+ |.-++.++..++ ..+|++++.++++.+.+++ +|... ++..+. .. +..
T Consensus 231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da---~~----l~~ 302 (431)
T PRK14903 231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA---ER----LTE 302 (431)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch---hh----hhh
Confidence 345788999999998764 555666666652 2289999999999887753 56543 222221 11 111
Q ss_pred hcCCCccEEE-E--cCCCH-------------------------HHHHHHHHHhhcCCcEEEEecc
Q 019535 219 MTDGGADYCF-E--CVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 219 ~~~g~~d~v~-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
...+.||.|+ | |+|.. ..+..+++.++++ |.++..-.
T Consensus 303 ~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTC 367 (431)
T PRK14903 303 YVQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTC 367 (431)
T ss_pred hhhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence 2233799998 3 54431 2366788999997 98766543
No 498
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.07 E-value=0.34 Score=46.29 Aligned_cols=70 Identities=26% Similarity=0.357 Sum_probs=47.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh-hHH----HHHHhcCCceEEeCCCCCCccHHHHHHHhcCCCccE
Q 019535 152 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKF----EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 226 (339)
Q Consensus 152 ~~~~VLI~G~G~iG~~a~~la~~~G~~~Vi~~~~~~-~~~----~~~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~ 226 (339)
.+.+|+|+|+|.+|+.+++.+...|+ +|++++.+. +.. +.+++.|.. ++..+. .+ .. .+++|+
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~---~~---~~----~~~~d~ 71 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIE-LVLGEY---PE---EF----LEGVDL 71 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCc---ch---hH----hhcCCE
Confidence 36789999998899999999999999 899998764 222 333445654 322222 11 11 126899
Q ss_pred EEEcCCC
Q 019535 227 CFECVGL 233 (339)
Q Consensus 227 v~d~~g~ 233 (339)
|+.+.|.
T Consensus 72 vv~~~g~ 78 (450)
T PRK14106 72 VVVSPGV 78 (450)
T ss_pred EEECCCC
Confidence 9998875
No 499
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.07 E-value=1.8 Score=32.69 Aligned_cols=88 Identities=19% Similarity=0.261 Sum_probs=59.2
Q ss_pred EEEEEccCHHHHHHHHHHHHc--CCCEEE-EEcCChhHHHH-HHhcCCceEEeCCCCCCccHHHHHHHhcCCCccEEEEc
Q 019535 155 TVVIFGLGSIGLAVAEGARLC--GATRII-GVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 230 (339)
Q Consensus 155 ~VLI~G~G~iG~~a~~la~~~--G~~~Vi-~~~~~~~~~~~-~~~~ga~~vi~~~~~~~~~~~~~l~~~~~g~~d~v~d~ 230 (339)
+|+|+|.|.+|.....-++.. +. +++ +.++++++.+. .+++|.. .+ .++.+.+.. ..+|+|+-+
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~-------~~~~~ll~~---~~~D~V~I~ 69 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY-------TDLEELLAD---EDVDAVIIA 69 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE-------SSHHHHHHH---TTESEEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch-------hHHHHHHHh---hcCCEEEEe
Confidence 588999999998887666555 45 555 44556655555 4567776 33 233333332 269999999
Q ss_pred CCCHHHHHHHHHHhhcCCcEEEEecc
Q 019535 231 VGLASLVQEAYACCRKGWGKTIVLGV 256 (339)
Q Consensus 231 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 256 (339)
++...-.+.+..++.. |.-+++.-
T Consensus 70 tp~~~h~~~~~~~l~~--g~~v~~EK 93 (120)
T PF01408_consen 70 TPPSSHAEIAKKALEA--GKHVLVEK 93 (120)
T ss_dssp SSGGGHHHHHHHHHHT--TSEEEEES
T ss_pred cCCcchHHHHHHHHHc--CCEEEEEc
Confidence 9988867778888877 46677754
No 500
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.06 E-value=0.59 Score=40.53 Aligned_cols=77 Identities=19% Similarity=0.190 Sum_probs=48.3
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-eE--EeCCCCCCccHHHHHHHhc--CCC
Q 019535 154 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--DGG 223 (339)
Q Consensus 154 ~~VLI~G~-G~iG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~~ga~-~v--i~~~~~~~~~~~~~l~~~~--~g~ 223 (339)
.+++|.|+ |.+|...++.+...|+ +|+.+.+++++.+.+ +..+.. .. .|..+ .+.+.+.+.+.. .+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD--KDQVFSAIDQAAEKFGG 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcCC
Confidence 36899987 9999999999889999 899998876554333 223422 12 23332 122223333322 136
Q ss_pred ccEEEEcCCC
Q 019535 224 ADYCFECVGL 233 (339)
Q Consensus 224 ~d~v~d~~g~ 233 (339)
+|++|++.|.
T Consensus 78 id~vi~~ag~ 87 (254)
T TIGR02415 78 FDVMVNNAGV 87 (254)
T ss_pred CCEEEECCCc
Confidence 8999998874
Done!