BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019536
(339 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 150/296 (50%), Gaps = 12/296 (4%)
Query: 42 IRAFSAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCF 101
++ FS ++L+ A++N+ ++ ++++G L D ++V + + T
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKRLKEERTQGGELQFQ 75
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL------RGFSFASLLIAPRIK 155
+ S H+N+L+L G C+ LV+ + G++ R S L R +
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
IA+ A +AYLH D I+ R +KA+N+LLDE + A + DF L+ + + HV
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 194
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKK 275
++G G IAPEY +T +E DV+ +G L EL+TG + NDDD+ +L++ K
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 276 SIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
++ + A+VD D ++ K+E+++ L Q+ C SP RP M +V + L
Sbjct: 255 LLKEKKLEALVD--VDLQGNY--KDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 149/296 (50%), Gaps = 12/296 (4%)
Query: 42 IRAFSAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCF 101
++ FS ++L+ A++N+ ++ ++++G L D ++V + +
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTL-VAVKRLKEERXQGGELQFQ 83
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL------RGFSFASLLIAPRIK 155
+ S H+N+L+L G C+ LV+ + G++ R S L R +
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
IA+ A +AYLH D I+ R +KA+N+LLDE + A + DF L+ + + HV
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 202
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKK 275
++G G IAPEY +T +E DV+ +G L EL+TG + NDDD+ +L++ K
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 276 SIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
++ + A+VD D ++ K+E+++ L Q+ C SP RP M +V + L
Sbjct: 263 LLKEKKLEALVD--VDLQGNY--KDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 19/290 (6%)
Query: 49 DLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSS 108
DL++ATNN+D +I ++++G L D + +K + +E I S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK--VALKRRTPESSQGIEEFETEIETLS 90
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLL------IAPRIKIAMEIAN 162
+H +++ LIG C E L+++ ++ G L+ + S L R++I + A
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPE-GETHVREEFIKGAYG 221
+ YLH R I+ R +K+ N+LLDEN+ K+ DF +S E G+TH+ +KG G
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHL-XXVVKGTLG 206
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+I PEYF E DVYSFG L E+L C + + + + E+A +S N +
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVL--CARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
IVDP D P E L+ G KCL+ S E RP M DV +L
Sbjct: 265 LEQIVDPNL-ADKIRP---ESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 141/290 (48%), Gaps = 19/290 (6%)
Query: 49 DLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSS 108
DL++ATNN+D +I ++++G L D + +K + +E I S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK--VALKRRTPESSQGIEEFETEIETLS 90
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLL------IAPRIKIAMEIAN 162
+H +++ LIG C E L+++ ++ G L+ + S L R++I + A
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPE-GETHVREEFIKGAYG 221
+ YLH R I+ R +K+ N+LLDEN+ K+ DF +S E +TH+ +KG G
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL-XXVVKGTLG 206
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+I PEYF E DVYSFG L E+L C + + + + E+A +S N +
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVL--CARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
IVDP D P E L+ G KCL+ S E RP M DV +L
Sbjct: 265 LEQIVDPNL-ADKIRP---ESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 38/235 (16%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKI--AMEIANAVA 165
+ +KH NI+ L G CL+ LV E + G L + I P I + A++IA +
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRV-LSGKRIPPDILVNWAVQIARGMN 119
Query: 166 YLHVGFDRPIVFRCIKASNVLLDE--------NYSAKLHDFSLSVSIPEGETHVREEF-I 216
YLH PI+ R +K+SN+L+ + N K+ DF L+ E H +
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----REWHRTTKMSA 174
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
GAY ++APE S F++ DV+S+G L ELLTG + F+G D L V
Sbjct: 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG--EVPFRG---IDGLAV------- 222
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
+G ++ + + P + +LM C + P RP ++ QL
Sbjct: 223 ----AYGVAMNKL-----ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGF-SFASLLIAPRIKIAMEIANAVAY 166
+ H++I+K GCC + +L V E V G+LR + S+ +A + A +I +AY
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAY 149
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGET--HVREEFIKGAYGFIA 224
LH + + R + A NVLLD + K+ DF L+ ++PEG VRE+ + + A
Sbjct: 150 LHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-A 205
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
PE F DV+SFG L ELLT C+
Sbjct: 206 PECLKEYKFYYASDVWSFGVTLYELLTHCD 235
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGF-SFASLLIAPRIKIAMEIANAVAY 166
+ H++I+K GCC + +L V E V G+LR + S+ +A + A +I +AY
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAY 132
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH--VREEFIKGAYGFIA 224
LH + + R + A NVLLD + K+ DF L+ ++PEG + VRE+ + + A
Sbjct: 133 LHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-A 188
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
PE F DV+SFG L ELLT C+
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLTHCD 218
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 9/150 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGF-SFASLLIAPRIKIAMEIANAVAY 166
+ H++I+K GCC + +L V E V G+LR + S+ +A + A +I +AY
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAY 132
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH--VREEFIKGAYGFIA 224
LH + + R + A NVLLD + K+ DF L+ ++PEG + VRE+ + + A
Sbjct: 133 LH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-A 188
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
PE F DV+SFG L ELLT C+
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLTHCD 218
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 19/155 (12%)
Query: 110 MKHKNILKLIGCCLETELPT--LVFESVKYGTLRGF------SFASLLIAPRIKIAMEIA 161
+ H++I+K GCC + + LV E V G+LR + A LL+ A +I
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-----FAQQIC 121
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH--VREEFIKGA 219
+AYLH + + R + A NVLLD + K+ DF L+ ++PEG + VRE+
Sbjct: 122 EGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 178
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
+ + APE F DV+SFG L ELLT C+
Sbjct: 179 FWY-APECLKECKFYYASDVWSFGVTLYELLTYCD 212
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 19/155 (12%)
Query: 110 MKHKNILKLIGCCLETELPT--LVFESVKYGTLRGF------SFASLLIAPRIKIAMEIA 161
+ H++I+K GCC + + LV E V G+LR + A LL+ A +I
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-----FAQQIC 122
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH--VREEFIKGA 219
+AYLH + + R + A NVLLD + K+ DF L+ ++PEG + VRE+
Sbjct: 123 EGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 179
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
+ + APE F DV+SFG L ELLT C+
Sbjct: 180 FWY-APECLKECKFYYASDVWSFGVTLYELLTYCD 213
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 116/279 (41%), Gaps = 52/279 (18%)
Query: 83 ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRG 142
++V +N++ ++ + Q+ H +++KL G C + L+ E KYG+LRG
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 143 FSFASLLIAPR--------------------------IKIAMEIANAVAYLHVGFDRPIV 176
F S + P I A +I+ + YL + +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLV 172
Query: 177 FRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEM 236
R + A N+L+ E K+ DF LS + E +++V+ + ++A E +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 237 CDVYSFGAFLCELLT-GCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNS 295
DV+SFG L E++T G N + G + +L+ + + DN
Sbjct: 233 SDVWSFGVLLWEIVTLGGN--PYPGIPPERLFNLLKTGHR-------------MERPDNC 277
Query: 296 FPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+ + +LM +C + P+ RP+ D++K L +M
Sbjct: 278 S-------EEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 115/279 (41%), Gaps = 52/279 (18%)
Query: 83 ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRG 142
++V +N++ ++ + Q+ H +++KL G C + L+ E KYG+LRG
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 143 FSFASLLIAPR--------------------------IKIAMEIANAVAYLHVGFDRPIV 176
F S + P I A +I+ + YL + +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMSLV 172
Query: 177 FRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEM 236
R + A N+L+ E K+ DF LS + E ++ V+ + ++A E +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 237 CDVYSFGAFLCELLT-GCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNS 295
DV+SFG L E++T G N + G + +L+ + + DN
Sbjct: 233 SDVWSFGVLLWEIVTLGGN--PYPGIPPERLFNLLKTGHR-------------MERPDNC 277
Query: 296 FPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+ + +LM +C + P+ RP+ D++K L +M
Sbjct: 278 S-------EEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 115/279 (41%), Gaps = 52/279 (18%)
Query: 83 ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRG 142
++V +N++ ++ + Q+ H +++KL G C + L+ E KYG+LRG
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 143 FSFASLLIAPR--------------------------IKIAMEIANAVAYLHVGFDRPIV 176
F S + P I A +I+ + YL + +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLV 172
Query: 177 FRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEM 236
R + A N+L+ E K+ DF LS + E ++ V+ + ++A E +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 237 CDVYSFGAFLCELLT-GCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNS 295
DV+SFG L E++T G N + G + +L+ + + DN
Sbjct: 233 SDVWSFGVLLWEIVTLGGN--PYPGIPPERLFNLLKTGHR-------------MERPDNC 277
Query: 296 FPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+ + +LM +C + P+ RP+ D++K L +M
Sbjct: 278 S-------EEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 118/292 (40%), Gaps = 32/292 (10%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPI--SVMKFHDNSTLDDVEYCF-N 102
S +D + +L + I + +G + + P +K N T D V F
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFA---SLLIAPRIKIAME 159
+ Q H +I+KLIG E + ++ E G LR F SL +A I A +
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 124
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++ A+AYL + V R I A NVL+ N KL DF LS + E T+ + K
Sbjct: 125 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLP 180
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++APE F DV+ FG + E+L V F+G N+D + +E ++
Sbjct: 181 IKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGVKNNDVIGRIENGER---- 235
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
P +L LM KC + P RP ++ QL
Sbjct: 236 ----------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 271
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 118/292 (40%), Gaps = 32/292 (10%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPI--SVMKFHDNSTLDDVEYCF-N 102
S +D + +L + I + +G + + P +K N T D V F
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFA---SLLIAPRIKIAME 159
+ Q H +I+KLIG E + ++ E G LR F SL +A I A +
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 147
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++ A+AYL + V R I A NVL+ N KL DF LS + E T+ + K
Sbjct: 148 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLP 203
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++APE F DV+ FG + E+L V F+G N+D + +E ++
Sbjct: 204 IKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGVKNNDVIGRIENGER---- 258
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
P +L LM KC + P RP ++ QL
Sbjct: 259 ----------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 294
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 118/292 (40%), Gaps = 32/292 (10%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISV--MKFHDNSTLDDVEYCF-N 102
S +D + +L + I + +G + + P +K N T D V F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFA---SLLIAPRIKIAME 159
+ Q H +I+KLIG E + ++ E G LR F SL +A I A +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 119
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++ A+AYL + V R I A NVL+ N KL DF LS + E T+ + K
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLP 175
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++APE F DV+ FG + E+L V F+G N+D + +E ++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGVKNNDVIGRIENGER---- 230
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
P +L LM KC + P RP ++ QL
Sbjct: 231 ----------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 118/292 (40%), Gaps = 32/292 (10%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPI--SVMKFHDNSTLDDVEYCF-N 102
S +D + +L + I + +G + + P +K N T D V F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAME 159
+ Q H +I+KLIG E + ++ E G LR F SL +A I A +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 119
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++ A+AYL + V R I A NVL+ N KL DF LS + E T+ + K
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLP 175
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++APE F DV+ FG + E+L V F+G N+D + +E ++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGVKNNDVIGRIENGER---- 230
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
P +L LM KC + P RP ++ QL
Sbjct: 231 ----------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 118/292 (40%), Gaps = 32/292 (10%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPI--SVMKFHDNSTLDDVEYCF-N 102
S +D + +L + I + +G + + P +K N T D V F
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAME 159
+ Q H +I+KLIG E + ++ E G LR F SL +A I A +
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 122
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++ A+AYL + V R I A NVL+ N KL DF LS + E T+ + K
Sbjct: 123 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLP 178
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++APE F DV+ FG + E+L V F+G N+D + +E ++
Sbjct: 179 IKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGVKNNDVIGRIENGER---- 233
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
P +L LM KC + P RP ++ QL
Sbjct: 234 ----------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 269
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 118/292 (40%), Gaps = 32/292 (10%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPI--SVMKFHDNSTLDDVEYCF-N 102
S +D + +L + I + +G + + P +K N T D V F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAME 159
+ Q H +I+KLIG E + ++ E G LR F SL +A I A +
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 121
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++ A+AYL + V R I A NVL+ N KL DF LS + E T+ + K
Sbjct: 122 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLP 177
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++APE F DV+ FG + E+L V F+G N+D + +E ++
Sbjct: 178 IKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGVKNNDVIGRIENGER---- 232
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
P +L LM KC + P RP ++ QL
Sbjct: 233 ----------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 268
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 118/292 (40%), Gaps = 32/292 (10%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISV--MKFHDNSTLDDVEYCF-N 102
S +D + +L + I + +G + + P +K N T D V F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFA---SLLIAPRIKIAME 159
+ Q H +I+KLIG E + ++ E G LR F SL +A I A +
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 499
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++ A+AYL + V R I A NVL+ N KL DF LS + E T+ + K
Sbjct: 500 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLP 555
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++APE F DV+ FG + E+L V F+G N+D + +E ++
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGVKNNDVIGRIENGER---- 610
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
P +L LM KC + P RP ++ QL
Sbjct: 611 ----------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 646
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 117/292 (40%), Gaps = 32/292 (10%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISV--MKFHDNSTLDDV-EYCFN 102
S +D + +L + I + +G + + P +K N T D V E
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFA---SLLIAPRIKIAME 159
+ Q H +I+KLIG E + ++ E G LR F SL +A I A +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 119
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++ A+AYL + V R I A NVL+ N KL DF LS + E T + K
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLP 175
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++APE F DV+ FG + E+L V F+G N+D + +E ++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGVKNNDVIGRIENGER---- 230
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
P +L LM KC + P RP ++ QL
Sbjct: 231 ----------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 45/239 (18%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-----SFASLLIAPRIKIAMEIAN 162
S++ H NI+KL G CL LV E + G+L A + ++ +
Sbjct: 57 SRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 114
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHVREEFIKGAYG 221
VAYLH + ++ R +K N+LL + K+ DF + I +TH+ KG+
Sbjct: 115 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN--KGSAA 169
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++APE F S+++E CDV+S+G L E++T
Sbjct: 170 WMAPEVFEGSNYSEKCDVFSWGIILWEVIT--------------------------RRKP 203
Query: 282 FGAIVDPIFD-----EDNSFPGKEEKL-QSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
F I P F + + P + L + + LM +C SK P RP M ++ K + +
Sbjct: 204 FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 45/239 (18%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-----SFASLLIAPRIKIAMEIAN 162
S++ H NI+KL G CL LV E + G+L A + ++ +
Sbjct: 56 SRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 113
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHVREEFIKGAYG 221
VAYLH + ++ R +K N+LL + K+ DF + I +TH+ KG+
Sbjct: 114 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN--KGSAA 168
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++APE F S+++E CDV+S+G L E++T
Sbjct: 169 WMAPEVFEGSNYSEKCDVFSWGIILWEVIT--------------------------RRKP 202
Query: 282 FGAIVDPIFD-----EDNSFPGKEEKL-QSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
F I P F + + P + L + + LM +C SK P RP M ++ K + +
Sbjct: 203 FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 104/250 (41%), Gaps = 30/250 (12%)
Query: 86 MKFHDNSTLDDV-EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF- 143
+K N T D V E + Q H +I+KLIG E + ++ E G LR F
Sbjct: 40 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL 98
Query: 144 --SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS 201
SL +A I A +++ A+AYL + V R I A NVL+ N KL DF LS
Sbjct: 99 QVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
Query: 202 VSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGN 261
+ E T+ + K ++APE F DV+ FG + E+L V F+G
Sbjct: 156 RYM-EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGV 213
Query: 262 GNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHR 321
N+D + +E ++ P +L LM KC + P R
Sbjct: 214 KNNDVIGRIENGER--------------------LPMPPNCPPTLYSLMTKCWAYDPSRR 253
Query: 322 PLMVDVAKQL 331
P ++ QL
Sbjct: 254 PRFTELKAQL 263
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + YL + V R + A
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAAR 162
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGETHV--REEFIKGAYGFIAPEYFATSSFNEMCDVYS 241
N +LDE ++ K+ DF L+ + + E + + K ++A E T F DV+S
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 242 FGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEE 301
FG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 223 FGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD-------- 264
Query: 302 KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
L ++M KC E RP ++ ++ ++ + +
Sbjct: 265 ---PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 33/274 (12%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 64 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 123
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + YL + V R + A
Sbjct: 124 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAAR 180
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGETHV--REEFIKGAYGFIAPEYFATSSFNEMCDVYS 241
N +LDE ++ K+ DF L+ + + E + + K ++A E T F DV+S
Sbjct: 181 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 240
Query: 242 FGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEE 301
FG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 241 FGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD-------- 282
Query: 302 KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
L ++M KC E RP ++ ++ ++
Sbjct: 283 ---PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 313
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 38 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 97
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + YL + V R + A
Sbjct: 98 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAAR 154
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGETHV--REEFIKGAYGFIAPEYFATSSFNEMCDVYS 241
N +LDE ++ K+ DF L+ + + E + + K ++A E T F DV+S
Sbjct: 155 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 214
Query: 242 FGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEE 301
FG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 215 FGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD-------- 256
Query: 302 KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
L ++M KC E RP ++ ++ ++ + +
Sbjct: 257 ---PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 291
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + YL + V R + A
Sbjct: 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAAR 157
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGETHV--REEFIKGAYGFIAPEYFATSSFNEMCDVYS 241
N +LDE ++ K+ DF L+ + + E + + K ++A E T F DV+S
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217
Query: 242 FGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEE 301
FG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 218 FGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD-------- 259
Query: 302 KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
L ++M KC E RP ++ ++ ++ + +
Sbjct: 260 ---PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-----RGFSFASLLIAPRIKIAM 158
+ +++H NI+ +G + ++V E + G+L + + L R+ +A
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAY 144
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
++A + YLH + PIV R +K+ N+L+D+ Y+ K+ DF LS + T + + G
Sbjct: 145 DVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAG 201
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT-------------------GCNVLEFK 259
++APE NE DVYSFG L EL T C LE
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP 261
Query: 260 GNGNDDDLTVLE--YAKKSIENNRFGAIVD 287
N N ++E + + + F I+D
Sbjct: 262 RNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 33/274 (12%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 65 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 124
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + YL + V R + A
Sbjct: 125 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAAR 181
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGETHV--REEFIKGAYGFIAPEYFATSSFNEMCDVYS 241
N +LDE ++ K+ DF L+ + + E + + K ++A E T F DV+S
Sbjct: 182 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 241
Query: 242 FGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEE 301
FG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 242 FGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD-------- 283
Query: 302 KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
L ++M KC E RP ++ ++ ++
Sbjct: 284 ---PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 314
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 104
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + YL + V R + A
Sbjct: 105 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAAR 161
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGETHV--REEFIKGAYGFIAPEYFATSSFNEMCDVYS 241
N +LDE ++ K+ DF L+ + + E + + K ++A E T F DV+S
Sbjct: 162 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 221
Query: 242 FGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEE 301
FG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 222 FGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD-------- 263
Query: 302 KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
L ++M KC E RP ++ ++ ++ + +
Sbjct: 264 ---PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 103
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + YL + V R + A
Sbjct: 104 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAAR 160
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGETHV--REEFIKGAYGFIAPEYFATSSFNEMCDVYS 241
N +LDE ++ K+ DF L+ + + E + + K ++A E T F DV+S
Sbjct: 161 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 220
Query: 242 FGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEE 301
FG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 221 FGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD-------- 262
Query: 302 KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
L ++M KC E RP ++ ++ ++ + +
Sbjct: 263 ---PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 43 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 102
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + YL + V R + A
Sbjct: 103 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAAR 159
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGETHV--REEFIKGAYGFIAPEYFATSSFNEMCDVYS 241
N +LDE ++ K+ DF L+ + + E + + K ++A E T F DV+S
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 242 FGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEE 301
FG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 220 FGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD-------- 261
Query: 302 KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
L ++M KC E RP ++ ++ ++ + +
Sbjct: 262 ---PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 296
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + YL + V R + A
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAAR 162
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGETHV--REEFIKGAYGFIAPEYFATSSFNEMCDVYS 241
N +LDE ++ K+ DF L+ + + E + + K ++A E T F DV+S
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 242 FGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEE 301
FG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 223 FGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD-------- 264
Query: 302 KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
L ++M KC E RP ++ ++ ++ + +
Sbjct: 265 ---PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 117/278 (42%), Gaps = 33/278 (11%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 104
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + YL + V R + A
Sbjct: 105 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAAR 161
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGETHV--REEFIKGAYGFIAPEYFATSSFNEMCDVYS 241
N +LDE ++ K+ DF L+ + + E + K ++A E T F DV+S
Sbjct: 162 NCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 221
Query: 242 FGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEE 301
FG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 222 FGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD-------- 263
Query: 302 KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
L ++M KC E RP ++ ++ ++ + +
Sbjct: 264 ---PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 117/292 (40%), Gaps = 32/292 (10%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISV--MKFHDNSTLDDVEYCF-N 102
S +D + +L + I + +G + + P +K N T D V F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFA---SLLIAPRIKIAME 159
+ Q H +I+KLIG E + ++ E G LR F SL +A I A +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 119
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++ A+AYL + V R I A NVL+ KL DF LS + E T+ + K
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLP 175
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++APE F DV+ FG + E+L V F+G N+D + +E ++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGVKNNDVIGRIENGER---- 230
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
P +L LM KC + P RP ++ QL
Sbjct: 231 ----------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 44/247 (17%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAY 166
++H N+LK IG + + + E +K GTLRG + + R+ A +IA+ +AY
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAY 123
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSV------SIPEGETHVREEFIKGAY 220
LH I+ R + + N L+ EN + + DF L+ + PEG +++ K Y
Sbjct: 124 LH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 221 G------FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAK 274
++APE S++E DV+SFG LCE++ G N D +Y
Sbjct: 181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII---------GRVNADP----DYLP 227
Query: 275 KSIENNRFGAIVDPIFDE---DNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
++++ FG V D N P S + +C PE RP V + L
Sbjct: 228 RTMD---FGLNVRGFLDRYCPPNCPP-------SFFPITVRCCDLDPEKRPSFVKLEHWL 277
Query: 332 RQMYLSV 338
+ + +
Sbjct: 278 ETLRMHL 284
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 117/292 (40%), Gaps = 32/292 (10%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISV--MKFHDNSTLDDVEYCF-N 102
S +D + +L + I + +G + + P +K N T D V F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFA---SLLIAPRIKIAME 159
+ Q H +I+KLIG E + ++ E G LR F SL +A I A +
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 499
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++ A+AYL + V R I A NVL+ KL DF LS + E T+ + K
Sbjct: 500 LSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLP 555
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++APE F DV+ FG + E+L V F+G N+D + +E ++
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEILMH-GVKPFQGVKNNDVIGRIENGER---- 610
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
P +L LM KC + P RP ++ QL
Sbjct: 611 ----------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 646
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-----RGFSFASLLIAPRIKIAM 158
+ +++H NI+ +G + ++V E + G+L + + L R+ +A
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAY 144
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
++A + YLH + PIV R +K+ N+L+D+ Y+ K+ DF LS + + + G
Sbjct: 145 DVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAG 201
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
++APE NE DVYSFG L EL T
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 35/279 (12%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + +L + V R + A
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAAR 162
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGE---THVREEFIKGAYGFIAPEYFATSSFNEMCDVY 240
N +LDE ++ K+ DF L+ + + E H + K ++A E T F DV+
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWMALESLQTQKFTTKSDVW 221
Query: 241 SFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKE 300
SFG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 222 SFGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD------- 264
Query: 301 EKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
L ++M KC E RP ++ ++ ++ + +
Sbjct: 265 ----PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 35/279 (12%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 103
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + +L + V R + A
Sbjct: 104 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAAR 160
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGE---THVREEFIKGAYGFIAPEYFATSSFNEMCDVY 240
N +LDE ++ K+ DF L+ + + E H + K ++A E T F DV+
Sbjct: 161 NCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWMALESLQTQKFTTKSDVW 219
Query: 241 SFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKE 300
SFG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 220 SFGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD------- 262
Query: 301 EKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
L ++M KC E RP ++ ++ ++ + +
Sbjct: 263 ----PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 35/279 (12%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + +L + V R + A
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAAR 162
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGE---THVREEFIKGAYGFIAPEYFATSSFNEMCDVY 240
N +LDE ++ K+ DF L+ + + E H + K ++A E T F DV+
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWMALESLQTQKFTTKSDVW 221
Query: 241 SFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKE 300
SFG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 222 SFGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD------- 264
Query: 301 EKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
L ++M KC E RP ++ ++ ++ + +
Sbjct: 265 ----PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 35/275 (12%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + +L + V R + A
Sbjct: 165 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAAR 221
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGE---THVREEFIKGAYGFIAPEYFATSSFNEMCDVY 240
N +LDE ++ K+ DF L+ + + E H + K ++A E T F DV+
Sbjct: 222 NCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWMALESLQTQKFTTKSDVW 280
Query: 241 SFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKE 300
SFG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 281 SFGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD------- 323
Query: 301 EKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
L ++M KC E RP ++ ++ ++
Sbjct: 324 ----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 35/275 (12%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 106
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + +L + V R + A
Sbjct: 107 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAAR 163
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGE---THVREEFIKGAYGFIAPEYFATSSFNEMCDVY 240
N +LDE ++ K+ DF L+ + + E H + K ++A E T F DV+
Sbjct: 164 NCMLDEKFTVKVADFGLARDMLDKEFDSVH-NKTGAKLPVKWMALESLQTQKFTTKSDVW 222
Query: 241 SFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKE 300
SFG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 223 SFGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD------- 265
Query: 301 EKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
L ++M KC E RP ++ ++ ++
Sbjct: 266 ----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 296
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 35/275 (12%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 106
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + +L + V R + A
Sbjct: 107 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAAR 163
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGE---THVREEFIKGAYGFIAPEYFATSSFNEMCDVY 240
N +LDE ++ K+ DF L+ + + E H + K ++A E T F DV+
Sbjct: 164 NCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWMALESLQTQKFTTKSDVW 222
Query: 241 SFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKE 300
SFG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 223 SFGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD------- 265
Query: 301 EKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
L ++M KC E RP ++ ++ ++
Sbjct: 266 ----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 296
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAVA 165
+ H+N+++L G L + +V E G+L R L+ + A+++A +
Sbjct: 72 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMG 129
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH-VREEFIKGAYGFIA 224
YL + + R + A N+LL K+ DF L ++P+ + H V +E K + + A
Sbjct: 130 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE T +F+ D + FG L E+ T Y ++
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFT--------------------YGQEPWIGLNGSQ 226
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
I+ I E P E+ Q + +M +C + PE RP V
Sbjct: 227 ILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 267
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 35/279 (12%)
Query: 71 LFEGTLVDQDRP---ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE- 126
++ GTL+D D +V + + + +V + H N+L L+G CL +E
Sbjct: 51 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 110
Query: 127 LPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKAS 183
P +V +K+G LR F + + I +++A + +L + V R + A
Sbjct: 111 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAAR 167
Query: 184 NVLLDENYSAKLHDFSLSVSIPEGE---THVREEFIKGAYGFIAPEYFATSSFNEMCDVY 240
N +LDE ++ K+ DF L+ + + E H + K ++A E T F DV+
Sbjct: 168 NCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKTGAKLPVKWMALESLQTQKFTTKSDVW 226
Query: 241 SFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKE 300
SFG L EL+T +G D+ + ++ R ++ P + D
Sbjct: 227 SFGVLLWELMT-------RGAPPYPDVNTFDITVYLLQGRR---LLQPEYCPD------- 269
Query: 301 EKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
L ++M KC E RP ++ ++ ++ + +
Sbjct: 270 ----PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 304
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Query: 107 SSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAV 164
SSQ+ H+NI+ +I E + LV E ++ TL + S L + I +I + +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI 124
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
+ H D IV R IK N+L+D N + K+ DF ++ ++ E + + + G + +
Sbjct: 125 KHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET-SLTQTNHVLGTVQYFS 180
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTG 252
PE + +E D+YS G L E+L G
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVG 208
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAVA 165
+ H+N+++L G L + +V E G+L R L+ + A+++A +
Sbjct: 72 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMG 129
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH-VREEFIKGAYGFIA 224
YL + + R + A N+LL K+ DF L ++P+ + H V +E K + + A
Sbjct: 130 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE T +F+ D + FG L E+ T Y ++
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFT--------------------YGQEPWIGLNGSQ 226
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
I+ I E P E+ Q + +M +C + PE RP V
Sbjct: 227 ILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 267
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAVA 165
+ H+N+++L G L + +V E G+L R L+ + A+++A +
Sbjct: 68 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMG 125
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH-VREEFIKGAYGFIA 224
YL + + R + A N+LL K+ DF L ++P+ + H V +E K + + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE T +F+ D + FG L E+ T Y ++
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT--------------------YGQEPWIGLNGSQ 222
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
I+ I E P E+ Q + +M +C + PE RP V
Sbjct: 223 ILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAVA 165
+ H+N+++L G L + +V E G+L R L+ + A+++A +
Sbjct: 68 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMG 125
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH-VREEFIKGAYGFIA 224
YL + + R + A N+LL K+ DF L ++P+ + H V +E K + + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE T +F+ D + FG L E+ T Y ++
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT--------------------YGQEPWIGLNGSQ 222
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
I+ I E P E+ Q + +M +C + PE RP V
Sbjct: 223 ILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAVA 165
+ H+N+++L G L + +V E G+L R L+ + A+++A +
Sbjct: 78 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMG 135
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH-VREEFIKGAYGFIA 224
YL + + R + A N+LL K+ DF L ++P+ + H V +E K + + A
Sbjct: 136 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE T +F+ D + FG L E+ T Y ++
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFT--------------------YGQEPWIGLNGSQ 232
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
I+ I E P E+ Q + +M +C + PE RP V
Sbjct: 233 ILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 273
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAVA 165
+ H+N+++L G L + +V E G+L R L+ + A+++A +
Sbjct: 78 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMG 135
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH-VREEFIKGAYGFIA 224
YL + + R + A N+LL K+ DF L ++P+ + H V +E K + + A
Sbjct: 136 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE T +F+ D + FG L E+ T Y ++
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFT--------------------YGQEPWIGLNGSQ 232
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
I+ I E P E+ Q + +M +C + PE RP V
Sbjct: 233 ILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 273
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 30/221 (13%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAVA 165
+ H+N+++L G L + +V E G+L R L+ + A+++A +
Sbjct: 68 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMG 125
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH-VREEFIKGAYGFIA 224
YL + + R + A N+LL K+ DF L ++P+ + H V +E K + + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE T +F+ D + FG L E+ T Y ++
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT--------------------YGQEPWIGLNGSQ 222
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
I+ I E P E+ Q + +M +C + PE RP V
Sbjct: 223 ILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 18/223 (8%)
Query: 43 RAFSAKDLKKATNNYDLHKVIQSDTSYR------LFEGTLVDQDRPISVMKFHDNSTLDD 96
+FS +LK TNN+D + +++G + + + + + T ++
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 97 VEYCFNN-IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAP--- 152
++ F+ I ++ +H+N+++L+G + + LV+ + G+L + L P
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD-RLSCLDGTPPLS 131
Query: 153 ---RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGET 209
R KIA AN + +LH + + R IK++N+LLDE ++AK+ DF L+ + +
Sbjct: 132 WHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 210 HVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
V I G ++APE D+YSFG L E++TG
Sbjct: 189 TVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 18/223 (8%)
Query: 43 RAFSAKDLKKATNNYDLHKVIQSDTSYR------LFEGTLVDQDRPISVMKFHDNSTLDD 96
+FS +LK TNN+D + +++G + + + + + T ++
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 66
Query: 97 VEYCFNN-IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAP--- 152
++ F+ I ++ +H+N+++L+G + + LV+ + G+L + L P
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD-RLSCLDGTPPLS 125
Query: 153 ---RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGET 209
R KIA AN + +LH + + R IK++N+LLDE ++AK+ DF L+ + +
Sbjct: 126 WHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 210 HVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
V I G ++APE D+YSFG L E++TG
Sbjct: 183 XVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITG 224
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 18/223 (8%)
Query: 43 RAFSAKDLKKATNNYDLHKVIQSDTSYR------LFEGTLVDQDRPISVMKFHDNSTLDD 96
+FS +LK TNN+D + +++G + + + + + T ++
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 97 VEYCFNN-IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAP--- 152
++ F+ I ++ +H+N+++L+G + + LV+ + G+L + L P
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD-RLSCLDGTPPLS 131
Query: 153 ---RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGET 209
R KIA AN + +LH + + R IK++N+LLDE ++AK+ DF L+ + +
Sbjct: 132 WHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 210 HVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
V I G ++APE D+YSFG L E++TG
Sbjct: 189 TVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITG 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 18/223 (8%)
Query: 43 RAFSAKDLKKATNNYDLHKVIQSDTSYR------LFEGTLVDQDRPISVMKFHDNSTLDD 96
+FS +LK TNN+D + +++G + + + + + T ++
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 63
Query: 97 VEYCFNN-IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAP--- 152
++ F+ I ++ +H+N+++L+G + + LV+ G+L + L P
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLD-RLSCLDGTPPLS 122
Query: 153 ---RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGET 209
R KIA AN + +LH + + R IK++N+LLDE ++AK+ DF L+ + +
Sbjct: 123 WHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 210 HVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
V I G + APE D+YSFG L E++TG
Sbjct: 180 XVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITG 221
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 120/298 (40%), Gaps = 43/298 (14%)
Query: 59 LHKVIQSDTSYRLFEGTLVDQDR-----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHK 113
L K++ + EG L +D + MK DNS+ ++E + H
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKL-DNSSQREIEEFLSEAACMKDFSHP 96
Query: 114 NILKLIGCCLETE-----LPTLVFESVKYGTLRGFSFASLL-IAPR-------IKIAMEI 160
N+++L+G C+E P ++ +KYG L + S L P+ +K ++I
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 161 ANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAY 220
A + YL +R + R + A N +L ++ + + DF LS I G+ + + K
Sbjct: 157 ALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPV 213
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENN 280
+IA E A + DV++FG + E+ T + + G N + L + +
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIATR-GMTPYPGVQNHEMYDYLLHGHR----- 267
Query: 281 RFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSV 338
E+ L L ++MY C P RP + QL ++ S+
Sbjct: 268 ---------------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 64 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 123 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREG-AKFPIKWTA 178
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 228
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 229 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 255
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 65 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 123
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 124 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTA 179
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 180 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 229
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 230 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 256
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 64 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 123 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTA 178
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 228
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 229 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 255
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 66 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 124
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 125 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTA 180
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 181 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 230
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 231 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 257
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 73 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 131
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 132 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTA 187
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 188 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 237
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 238 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 264
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 72 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 130
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 131 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTA 186
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 187 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 236
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 237 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 263
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 64 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 123 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTA 178
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 228
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 229 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 255
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 70 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 129 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTA 184
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 234
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 235 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 261
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 70 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 129 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTA 184
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 234
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 235 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 261
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 69 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 127
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 128 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTA 183
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 184 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 233
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 234 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 260
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 64 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 123 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTA 178
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 228
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 229 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 255
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 60 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 118
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 119 AFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTA 174
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 224
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 225 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 251
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 59 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 117
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 118 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTA 173
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 174 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 223
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 224 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 250
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 53 ATNNYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFN 102
+ NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLK 58
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAM 158
++KH N+++L+G C ++ E + YG L R + + + +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I++A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 174
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ APE A + F+ DV++FG L E+ T
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
Q++H+ +++L + + ++ E ++ G+L F S L I + +A +IA +
Sbjct: 74 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 132
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
A++ +R + R ++A+N+L+ + S K+ DF L+ I + E RE K + A
Sbjct: 133 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTA 188
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE +F DV+SFG L E++T + + G N + + LE +
Sbjct: 189 PEAINYGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNLERGYR--------- 238
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+V P DN + L QLM C + PE RP
Sbjct: 239 MVRP----DNC-------PEELYQLMRLCWKERPEDRP 265
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 53 ATNNYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFN 102
+ NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLK 58
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAM 158
++KH N+++L+G C ++ E + YG L R + + + +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I++A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 174
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ APE A + F+ DV++FG L E+ T
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 50 LKKATNNYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEY 99
+ ++ NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEE 60
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIK 155
++KH N+++L+G C ++ E + YG L R + + +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+A +I++A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+
Sbjct: 121 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAG 176
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
K + APE A + F+ DV++FG L E+ T
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 50 LKKATNNYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEY 99
+ ++ NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEE 60
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIK 155
++KH N+++L+G C ++ E + YG L R + + +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 120
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+A +I++A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+
Sbjct: 121 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAG 176
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
K + APE A + F+ DV++FG L E+ T
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 122/294 (41%), Gaps = 41/294 (13%)
Query: 56 NYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIV 105
NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAA 268
Query: 106 FSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIA 161
++KH N+++L+G C ++ E + YG L R + + + +A +I+
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 328
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 329 SAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 384
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ APE A + F+ DV++FG L E+ T + + G D V E +K R
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPG---IDLSQVYELLEKDYRMER 440
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ ++ +LM C +P RP ++ + M+
Sbjct: 441 PEGCPEKVY-----------------ELMRACWQWNPSDRPSFAEIHQAFETMF 477
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 122/294 (41%), Gaps = 41/294 (13%)
Query: 56 NYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIV 105
NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAA 265
Query: 106 FSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIA 161
++KH N+++L+G C ++ E + YG L R + + + +A +I+
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 325
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 326 SAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 381
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ APE A + F+ DV++FG L E+ T + + G D V E +K R
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPG---IDLSQVYELLEKDYRMER 437
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ +++ LM C +P RP ++ + M+
Sbjct: 438 PEGCPEKVYE-----------------LMRACWQWNPSDRPSFAEIHQAFETMF 474
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 52 KATNNYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCF 101
+ + NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 13 QGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFL 70
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIA 157
++KH N+++L+G C ++ E + YG L R + + + +A
Sbjct: 71 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 130
Query: 158 MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
+I++A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 131 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAK 186
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ APE A + F+ DV++FG L E+ T
Sbjct: 187 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 53 ATNNYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFN 102
+ NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLK 58
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAM 158
++KH N+++L+G C ++ E + YG L R + + + +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I++A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 174
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ APE A + F+ DV++FG L E+ T
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 136/335 (40%), Gaps = 50/335 (14%)
Query: 18 SNMVRNEKLLLQKLIATFN---GKRNPIRAFSAKDLKKATNNYDLHKVIQSDTSYR---- 70
+ +V + + LI T + KRN + + NYD ++ ++D + +
Sbjct: 215 AELVHHHSTVADGLITTLHYPAPKRNKPTVYGV------SPNYDKWEMERTDITMKHKLG 268
Query: 71 ------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLE 124
++EG ++V +++ +VE ++KH N+++L+G C
Sbjct: 269 GGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 125 TELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCI 180
++ E + YG L R + + + +A +I++A+ YL + + R +
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNL 383
Query: 181 KASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVY 240
A N L+ EN+ K+ DF LS + G+T+ K + APE A + F+ DV+
Sbjct: 384 AARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 442
Query: 241 SFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKE 300
+FG L E+ T + + G D V E +K R + +++
Sbjct: 443 AFGVLLWEIAT-YGMSPYPG---IDLSQVYELLEKDYRMERPEGCPEKVYE--------- 489
Query: 301 EKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
LM C +P RP ++ + M+
Sbjct: 490 --------LMRACWQWNPSDRPSFAEIHQAFETMF 516
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 53 ATNNYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFN 102
+ NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLK 58
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAM 158
++KH N+++L+G C ++ E + YG L R + + + +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I++A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 174
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ APE A + F+ DV++FG L E+ T
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 50 LKKATNNYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEY 99
+ ++ NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEE 60
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIK 155
++KH N+++L+G C ++ E + YG L R + + +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+A +I++A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+
Sbjct: 121 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAG 176
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
K + APE A + F+ DV++FG L E+ T
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 50 LKKATNNYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEY 99
+ ++ NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEE 60
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIK 155
++KH N+++L+G C ++ E + YG L R + + +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+A +I++A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+
Sbjct: 121 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAG 176
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
K + APE A + F+ DV++FG L E+ T
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 56 NYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIV 105
NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAA 63
Query: 106 FSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIA 161
++KH N+++L+G C ++ E + YG L R + + + +A +I+
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 124 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 179
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ APE A + F+ DV++FG L E+ T
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 56 NYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIV 105
NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAA 62
Query: 106 FSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIA 161
++KH N+++L+G C ++ E + YG L R + + + +A +I+
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 123 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIK 178
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ APE A + F+ DV++FG L E+ T
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 56 NYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIV 105
NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAA 63
Query: 106 FSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIA 161
++KH N+++L+G C ++ E + YG L R + + + +A +I+
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 124 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 179
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ APE A + F+ DV++FG L E+ T
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 111/269 (41%), Gaps = 31/269 (11%)
Query: 71 LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTL 130
++EG ++V +++ +VE ++KH N+++L+G C +
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 131 VFESVKYGT----LRGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
+ E + YG LR + + + +A +I++A+ YL + + R + A N L
Sbjct: 85 IIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 141
Query: 187 LDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFL 246
+ EN+ K+ DF LS + G+T K + APE A + F+ DV++FG L
Sbjct: 142 VGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 200
Query: 247 CELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSL 306
E+ T + + G D V E +K R + ++
Sbjct: 201 WEIAT-YGMSPYPGI---DPSQVYELLEKDYRMERPEGCPEKVY---------------- 240
Query: 307 GQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+LM C +P RP ++ + M+
Sbjct: 241 -ELMRACWQWNPSDRPSFAEIHQAFETMF 268
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 40/232 (17%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL-------RGFSFASLLIAPRIKIAMEIA 161
++ H +++L G CLE LVFE +++G L RG A L+ + +++
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG----MCLDVC 113
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+AYL + ++ R + A N L+ EN K+ DF ++ + + + + K
Sbjct: 114 EGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVK 169
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE F+ S ++ DV+SFG + E V K EN
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWE--------------------VFSEGKIPYENRS 209
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQS--LGQLMYKCLSKSPEHRPLMVDVAKQL 331
+V+ I F + +L S + Q+M C + PE RP + +QL
Sbjct: 210 NSEVVEDI---STGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 56 NYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIV 105
NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAA 62
Query: 106 FSSQMKHKNILKLIGCCLETELPTLVFESVKYGT----LRGFSFASLLIAPRIKIAMEIA 161
++KH N+++L+G C ++ E + YG LR + + + +A +I+
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+A+ YL + + R + A N L+ EN+ K+ DF LS + G+T K
Sbjct: 123 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIK 178
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ APE A + F+ DV++FG L E+ T
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 56 NYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIV 105
NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAA 65
Query: 106 FSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIA 161
++KH N+++L+G C ++ E + YG L R + + + +A +I+
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 125
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 126 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 181
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ APE A + F+ DV++FG L E+ T
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 40/235 (17%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL-------RGFSFASLLIAPRIKIAMEIA 161
++ H +++L G CLE LVFE +++G L RG A L+ + +++
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG----MCLDVC 113
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+AYL + ++ R + A N L+ EN K+ DF ++ + + + + K
Sbjct: 114 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVK 169
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE F+ S ++ DV+SFG + E V K EN
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWE--------------------VFSEGKIPYENRS 209
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQS--LGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+V+ I F + +L S + Q+M C + PE RP + +QL ++
Sbjct: 210 NSEVVEDI---STGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 40/235 (17%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL-------RGFSFASLLIAPRIKIAMEIA 161
++ H +++L G CLE LVFE +++G L RG A L+ + +++
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG----MCLDVC 133
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+AYL + ++ R + A N L+ EN K+ DF ++ + + + + K
Sbjct: 134 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVK 189
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE F+ S ++ DV+SFG + E V K EN
Sbjct: 190 WASPEVFSFSRYSSKSDVWSFGVLMWE--------------------VFSEGKIPYENRS 229
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQS--LGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+V+ I F + +L S + Q+M C + PE RP + +QL ++
Sbjct: 230 NSEVVEDI---STGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 120/294 (40%), Gaps = 41/294 (13%)
Query: 56 NYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIV 105
NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAA 61
Query: 106 FSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIA 161
++KH N+++L+G C ++ E + YG L R + + + +A +I+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ APE A + F+ DV++FG L E+ T Y
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT--------------------YGMSPYPGID 217
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + + ++D E + + +LM C +P RP ++ + M+
Sbjct: 218 LSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 56 NYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIV 105
NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAA 63
Query: 106 FSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIA 161
++KH N+++L+G C ++ E + YG L R + + + +A +I+
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 124 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIK 179
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ APE A + F+ DV++FG L E+ T
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 56 NYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIV 105
NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAA 61
Query: 106 FSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIA 161
++KH N+++L+G C ++ E + YG L R + + + +A +I+
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+ K
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ APE A + F+ DV++FG L E+ T
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 40/235 (17%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL-------RGFSFASLLIAPRIKIAMEIA 161
++ H +++L G CLE LVFE +++G L RG A L+ + +++
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG----MCLDVC 116
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+AYL + ++ R + A N L+ EN K+ DF ++ + + + + K
Sbjct: 117 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVK 172
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE F+ S ++ DV+SFG + E V K EN
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWE--------------------VFSEGKIPYENRS 212
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQS--LGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+V+ I F + +L S + Q+M C + PE RP + +QL ++
Sbjct: 213 NSEVVEDI---STGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 40/235 (17%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL-------RGFSFASLLIAPRIKIAMEIA 161
++ H +++L G CLE LVFE +++G L RG A L+ + +++
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG----MCLDVC 111
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+AYL + ++ R + A N L+ EN K+ DF ++ + + + + K
Sbjct: 112 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVK 167
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE F+ S ++ DV+SFG + E V K EN
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWE--------------------VFSEGKIPYENRS 207
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQS--LGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+V+ I F + +L S + Q+M C + PE RP + +QL ++
Sbjct: 208 NSEVVEDI---STGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAV 164
+++H+ +++L E + +V E + G+L +G + L + + +A +IA+ +
Sbjct: 59 KLRHEKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 117
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 118 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG-AKFPIKWTA 173
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 174 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 223
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 224 -----------MPCPPECPESLHDLMCQCWRKEPEERP 250
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 50 LKKATNNYDLHKVIQSDTSYR----------LFEGTLVDQDRPISVMKFHDNSTLDDVEY 99
+ ++ NYD ++ ++D + + ++EG ++V +++ +VE
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEE 60
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIK 155
++KH N+++L+G C ++ E + YG L R + + +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+A +I++A+ YL + + R + A N L+ EN+ K+ DF LS + G+T
Sbjct: 121 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAG 176
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
K + APE A + F+ DV++FG L E+ T
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPR-IKIAMEIANAV 164
+++H+ +++L E + +V E + G+L F L P+ + +A +IA+ +
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG-AKFPIKWTA 183
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 233
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 234 -----------MPCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 111/269 (41%), Gaps = 31/269 (11%)
Query: 71 LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTL 130
++EG ++V +++ +VE ++KH N+++L+G C +
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 131 VFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
+ E + YG L R + + + +A +I++A+ YL + + R + A N L
Sbjct: 85 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 141
Query: 187 LDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFL 246
+ EN+ K+ DF LS + G+T K + APE A + F+ DV++FG L
Sbjct: 142 VGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 200
Query: 247 CELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSL 306
E+ T + + G D V E +K R + ++
Sbjct: 201 WEIAT-YGMSPYPGI---DPSQVYELLEKDYRMERPEGCPEKVY---------------- 240
Query: 307 GQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+LM C +P RP ++ + M+
Sbjct: 241 -ELMRACWQWNPSDRPSFAEIHQAFETMF 268
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 94 LDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR 153
L VE+ + + S + H I+++ G + + ++ + ++ G L F+ L + R
Sbjct: 47 LKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL----FSLLRKSQR 102
Query: 154 IK------IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEG 207
A E+ A+ YLH + I++R +K N+LLD+N K+ DF + +P+
Sbjct: 103 FPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159
Query: 208 ETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+ G +IAPE +T +N+ D +SFG + E+L G
Sbjct: 160 TYX-----LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAV 164
+++H+ +++L E + +V E + G+L +G + L + + +A +IA+ +
Sbjct: 235 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 294 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 349
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 399
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 400 -----------MPCPPECPESLHDLMCQCWRKEPEERP 426
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 96 DVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIA 151
+VE ++KH N+++L+G C +V E + YG L R + +
Sbjct: 71 EVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAV 130
Query: 152 PRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHV 211
+ +A +I++A+ YL + + R + A N L+ EN+ K+ DF LS + G+T+
Sbjct: 131 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLS-RLMTGDTYT 186
Query: 212 REEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
K + APE A ++F+ DV++FG L E+ T
Sbjct: 187 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAV 164
+++H+ +++L E + +V E + G+L +G + L + + +A +IA+ +
Sbjct: 235 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 294 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 349
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 399
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 400 -----------MPCPPECPESLHDLMCQCWRKEPEERP 426
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 111/269 (41%), Gaps = 31/269 (11%)
Query: 71 LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTL 130
++EG ++V +++ +VE ++KH N+++L+G C +
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 131 VFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
+ E + YG L R + + + +A +I++A+ YL + + R + A N L
Sbjct: 85 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 141
Query: 187 LDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFL 246
+ EN+ K+ DF LS + G+T K + APE A + F+ DV++FG L
Sbjct: 142 VGENHLVKVADFGLS-RLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 200
Query: 247 CELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSL 306
E+ T + + G D V E +K R + ++
Sbjct: 201 WEIAT-YGMSPYPGI---DPSQVYELLEKDYRMERPEGCPEKVY---------------- 240
Query: 307 GQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+LM C +P RP ++ + M+
Sbjct: 241 -ELMRACWQWNPSDRPSFAEIHQAFETMF 268
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 9/158 (5%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-E 159
+ S ++H NIL+L G + L+ E GT+ R S R + E
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+ANA++Y H + ++ R IK N+LL N K+ DF SV P R + + G
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRDTLCGT 173
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLE 257
++ PE +E D++S G E L G E
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAV 164
+++H+ +++L E + +V E + G+L +G + L + + +A +IA+ +
Sbjct: 235 KLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 293
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 294 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 349
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 399
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 400 -----------MPCPPECPESLHDLMCQCWRKEPEERP 426
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPR-IKIAMEIANAV 164
+++H+ +++L E + +V E + G+L F L P+ + +A +IA+ +
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 183
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 233
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 234 -----------MPCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAV 164
+++H+ +++L E + +V E + G+L +G + L + + +A +IA+ +
Sbjct: 62 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 120
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 121 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 176
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 177 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 226
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 227 -----------MPCPPECPESLHDLMCQCWRKEPEERP 253
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAV 164
+++H+ +++L E + +V E + G+L +G + L + + +A +IA+ +
Sbjct: 318 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 376
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 377 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 432
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 433 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 482
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 483 -----------MPCPPECPESLHDLMCQCWRKEPEERP 509
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPR-IKIAMEIANAV 164
+++H+ +++L E + +V E + G+L F L P+ + +A +IA+ +
Sbjct: 236 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 294
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L I + E R+ K + A
Sbjct: 295 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQG-AKFPIKWTA 350
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 351 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 400
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 401 -----------MPCPPECPESLHDLMCQCWRKDPEERP 427
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 23/197 (11%)
Query: 127 LPTLVFESVKYGTLRGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
LP +V E V TLR + P+ I + IA+A L+ I+ R +K +N++
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-IADACQALNFSHQNGIIHRDVKPANIM 148
Query: 187 LDENYSAKLHDFSLSVSIPE-GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAF 245
+ + K+ DF ++ +I + G + + + G +++PE S + DVYS G
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 246 LCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQS 305
L E+LTG E G+ D ++ ++ DPI + E L +
Sbjct: 209 LYEVLTG----EPPFTGDSPDSVAYQHVRE-----------DPIPPS-----ARHEGLSA 248
Query: 306 -LGQLMYKCLSKSPEHR 321
L ++ K L+K+PE+R
Sbjct: 249 DLDAVVLKALAKNPENR 265
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPR-IKIAMEIANAV 164
+++H+ +++L E + +V E + G+L F L P+ + +A +IA+ +
Sbjct: 60 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 118
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 119 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 174
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 224
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 225 -----------MPCPPECPESLHDLMCQCWRKDPEERP 251
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAV 164
+++H+ +++L E + +V E + G+L +G + L + + ++ +IA+ +
Sbjct: 66 KLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM 124
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 125 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQG-AKFPIKWTA 180
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 181 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 230
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 231 -----------MPCPPECPESLHDLMCQCWRKEPEERP 257
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPR-IKIAMEIANAV 164
+++H+ +++L E + +V E + G+L F L P+ + +A +IA+ +
Sbjct: 58 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 116
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 117 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 172
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 173 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 222
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 223 -----------MPCPPECPESLHDLMCQCWRKDPEERP 249
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPR-IKIAMEIANAV 164
+++H+ +++L E + +V E + G+L F L P+ + +A +IA+ +
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 183
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 233
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 234 -----------MPCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-E 159
+ S ++H NIL+L G + L+ E GT+ R S R + E
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+ANA++Y H + ++ R IK N+LL N K+ DF SV P R + G
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----RRTTLCGT 173
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLE 257
++ PE +E D++S G E L G E
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPR-IKIAMEIANAV 164
+++H+ +++L E + +V E + G L F L P+ + +A +IA+ +
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 183
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 233
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 234 -----------MPCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPR-IKIAMEIANAV 164
+++H+ +++L E + +V E + G+L F L P+ + +A +IA+ +
Sbjct: 69 KIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 183
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 233
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 234 -----------MPCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPR-IKIAMEIANAV 164
+++H+ +++L E + +V E + G+L F L P+ + +A +IA+ +
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 183
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 233
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 234 -----------MPCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRIKIAMEIANAV 164
+++H+ +++L E + +V E + G+L +G + L + + ++ +IA+ +
Sbjct: 66 KLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM 124
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 125 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 180
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 181 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 230
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 231 -----------MPCPPECPESLHDLMCQCWRKEPEERP 257
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 38/241 (15%)
Query: 96 DVEYCFNNIVFSSQMKHKNILKLIGCCLETE------LPTLVFESVKYGTLRGFSFAS-- 147
D+E + H ++ KL+G L + +P ++ +K+G L F AS
Sbjct: 68 DIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRI 127
Query: 148 ------LLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS 201
L + ++ ++IA + YL R + R + A N +L E+ + + DF LS
Sbjct: 128 GENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLS 184
Query: 202 VSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGN 261
I G+ + + K ++A E A + + DV++FG + E++T + G
Sbjct: 185 RKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT-PYAGI 243
Query: 262 GNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHR 321
N + I N G N E ++ + LMY+C S P+ R
Sbjct: 244 ENAE-----------IYNYLIGG---------NRLKQPPECMEEVYDLMYQCWSADPKQR 283
Query: 322 P 322
P
Sbjct: 284 P 284
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETE-LPTLVFESVKYGTLRGFSFASLLI 150
+ + VE + + H N+L LIG L E LP ++ + +G L F S
Sbjct: 61 TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQF-IRSPQR 119
Query: 151 APRIK----IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPE 206
P +K +++A + YL ++ V R + A N +LDE+++ K+ DF L+ I +
Sbjct: 120 NPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILD 176
Query: 207 GETHVREE--FIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
E + ++ + + A E T F DV+SFG L ELLT
Sbjct: 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPR-IKIAMEIANAV 164
+++H+ +++L E + +V E + G L F L P+ + +A +IA+ +
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R ++A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 128 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 183
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 233
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 234 -----------MPCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 33/173 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I V Y+H + ++ R +K SN+ L + K+ DF L S+ R KG
Sbjct: 144 QITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS---KG 197
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIE 278
+++PE ++ + + D+Y+ G L ELL C+ T E + K
Sbjct: 198 TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD-------------TAFETS-KFFT 243
Query: 279 NNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
+ R G I D IFD K+EK L+ K LSK PE RP ++ + L
Sbjct: 244 DLRDGIISD-IFD-------KKEK-----TLLQKLLSKKPEDRPNTSEILRTL 283
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 40/235 (17%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTL-------RGFSFASLLIAPRIKIAMEIA 161
++ H +++L G CLE LV E +++G L RG A L+ + +++
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLG----MCLDVC 114
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+AYL + ++ R + A N L+ EN K+ DF ++ + + + + K
Sbjct: 115 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVK 170
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE F+ S ++ DV+SFG + E V K EN
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWE--------------------VFSEGKIPYENRS 210
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQS--LGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+V+ I F + +L S + Q+M C + PE RP + +QL ++
Sbjct: 211 NSEVVEDI---STGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPR-IKIAMEIANAV 164
+++H+ +++L E + +V E + G+L F L P+ + +A +IA+ +
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ V R + A+N+L+ EN K+ DF L+ I + E R+ K + A
Sbjct: 128 AYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTA 183
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL T V + G N + L +E +
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTTKGRV-PYPGMVNREVLDQVERGYR--------- 233
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P E +SL LM +C K PE RP
Sbjct: 234 -----------MPCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAVA 165
++H +++L E ++ E + G+L F +L+ I + +IA +A
Sbjct: 65 LQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA 124
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAP 225
Y+ + + R ++A+NVL+ E+ K+ DF L+ I + E RE K + AP
Sbjct: 125 YIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG-AKFPIKWTAP 180
Query: 226 EYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLE--YAKKSIEN 279
E F DV+SFG L E++T + + G N D +T L Y +EN
Sbjct: 181 EAINFGCFTIKSDVWSFGILLYEIVTYGKI-PYPGRTNADVMTALSQGYRMPRVEN 235
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 33/173 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I V Y+H + ++ R +K SN+ L + K+ DF L S+ R KG
Sbjct: 130 QITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS---KG 183
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIE 278
+++PE ++ + + D+Y+ G L ELL C+ T E + K
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD-------------TAFETS-KFFT 229
Query: 279 NNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
+ R G I D IFD K+EK L+ K LSK PE RP ++ + L
Sbjct: 230 DLRDGIISD-IFD-------KKEK-----TLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 114/319 (35%), Gaps = 47/319 (14%)
Query: 19 NMVRNEKLLLQKLIATFNGKRNPIRAFSAKDLKKATNNYDLHKVIQSDTSYRLFEGTLV- 77
N+ KL + A + P RA + + + + K+I S S + G L
Sbjct: 13 NLYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRV 72
Query: 78 --DQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESV 135
+D P+++ T + Q H NI++L G L +V E +
Sbjct: 73 PGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132
Query: 136 KYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYS 192
+ G+L F I + + + + YL D V R + A NVL+D N
Sbjct: 133 ENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLV 189
Query: 193 AKLHDFSLSVSIPEGETHVREEFIKGAYG---------FIAPEYFATSSFNEMCDVYSFG 243
K+ DF LS V E+ AY + APE A +F+ DV+SFG
Sbjct: 190 CKVSDFGLS--------RVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG 241
Query: 244 AFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKL 303
+ E VL Y ++ N ++ + +E P
Sbjct: 242 VVMWE--------------------VLAYGERPYWNMTNRDVISSV-EEGYRLPAPMGCP 280
Query: 304 QSLGQLMYKCLSKSPEHRP 322
+L QLM C K RP
Sbjct: 281 HALHQLMLDCWHKDRAQRP 299
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 89/226 (39%), Gaps = 32/226 (14%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + + G
Sbjct: 120 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDTLCGTLD 172
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++ PE +E D++S G E L G K E N
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANT 211
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ I + +FP + + L+ + L +P RP++ +V
Sbjct: 212 YQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 27/227 (11%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFAS---LLIAPRIKIAM 158
N + + +H NIL +G + +L +V + + +L AS + I IA
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR 127
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+ A + YLH + I+ R +K++N+ L E+ + K+ DF L+ + E + G
Sbjct: 128 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 219 AYGFIAPEYFATSSFNE---MCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKK 275
+ ++APE N DVY+FG L EL+TG L + N D +
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQI-------- 234
Query: 276 SIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
IE G++ + ++ P + + +LM +CL K + RP
Sbjct: 235 -IEMVGRGSLSPDLSKVRSNCPKR------MKRLMAECLKKKRDERP 274
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 113/312 (36%), Gaps = 33/312 (10%)
Query: 19 NMVRNEKLLLQKLIATFNGKRNPIRAFSAKDLKKATNNYDLHKVIQSDTSYRLFEGTLV- 77
N+ KL + A + P RA + + + + K+I S S + G L
Sbjct: 13 NLYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRV 72
Query: 78 --DQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESV 135
+D P+++ T + Q H NI++L G L +V E +
Sbjct: 73 PGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132
Query: 136 KYGTLRGF---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYS 192
+ G+L F I + + + + YL D V R + A NVL+D N
Sbjct: 133 ENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLV 189
Query: 193 AKLHDFSLSVSIPEGETHVREEFIKG--AYGFIAPEYFATSSFNEMCDVYSFGAFLCELL 250
K+ DF LS + E + G + APE A +F+ DV+SFG + E
Sbjct: 190 CKVSDFGLS-RVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE-- 246
Query: 251 TGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLM 310
VL Y ++ N ++ + +E P +L QLM
Sbjct: 247 ------------------VLAYGERPYWNMTNRDVISSV-EEGYRLPAPMGCPHALHQLM 287
Query: 311 YKCLSKSPEHRP 322
C K RP
Sbjct: 288 LDCWHKDRAQRP 299
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 144
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + + G
Sbjct: 145 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDDLCGTLD 197
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
++ PE +E D++S G E L G
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 228
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 27/227 (11%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFAS---LLIAPRIKIAM 158
N + + +H NIL +G + +L +V + + +L AS + I IA
Sbjct: 57 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR 115
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+ A + YLH + I+ R +K++N+ L E+ + K+ DF L+ + E + G
Sbjct: 116 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSG 172
Query: 219 AYGFIAPEYFATSSFNE---MCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKK 275
+ ++APE N DVY+FG L EL+TG L + N D +
Sbjct: 173 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQI-------- 222
Query: 276 SIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
IE G++ + ++ P + + +LM +CL K + RP
Sbjct: 223 -IEMVGRGSLSPDLSKVRSNCPKR------MKRLMAECLKKKRDERP 262
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 176
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
++ PE +E D++S G E L G
Sbjct: 177 YLPPEXIEGRXHDEKVDLWSLGVLCYEFLVG 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-E 159
+ S ++H NIL+L G ++ L+ E GT+ R S R + E
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+ANA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 117 LANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGT 169
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
++ PE +E D++S G E L G
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 120
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 121 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGTLD 173
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++ PE +E D++S G E L G K E N
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANT 212
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ I + +FP + + L+ + L +P RP++ +V
Sbjct: 213 YQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 256
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 32/228 (14%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-E 159
+ S ++H NIL+L G + L+ E GT+ R S R + E
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+ANA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGT 172
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++ PE +E D++S G E L G K E
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEA 211
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
N + I + +FP + + L+ + L +P RP++ +V
Sbjct: 212 NTYQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFAS---LLIAPRIKIAM 158
N + + +H NIL +G +L +V + + +L AS + I IA
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR 127
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+ A + YLH + I+ R +K++N+ L E+ + K+ DF L+ + E + G
Sbjct: 128 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 219 AYGFIAPEYFATSSFNE---MCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKK 275
+ ++APE N DVY+FG L EL+TG L + N D +
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQI-------- 234
Query: 276 SIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
IE G++ + ++ P + + +LM +CL K + RP
Sbjct: 235 -IEMVGRGSLSPDLSKVRSNCPKR------MKRLMAECLKKKRDERP 274
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 32/228 (14%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-E 159
+ S ++H NIL+L G + L+ E GT+ R S R + E
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+ANA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXLCGT 169
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++ PE +E D++S G E L G K E
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEA 208
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
N + I + +FP + + L+ + L +P RP++ +V
Sbjct: 209 NTYQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 76 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 135
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 136 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 188
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
++ PE +E D++S G E L G
Sbjct: 189 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 219
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 32/228 (14%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-E 159
+ S ++H NIL+L G + L+ E GT+ R S R + E
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+ANA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTXLCGT 169
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++ PE +E D++S G E L G K E
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEA 208
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
N + I + +FP + + L+ + L +P RP++ +V
Sbjct: 209 NTYQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 32/228 (14%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-E 159
+ S ++H NIL+L G + L+ E GT+ R S R + E
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+ANA++Y H + ++ R IK N+LL K+ DF SV P R + + G
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRDDLCGT 172
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++ PE +E D++S G E L G K E
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEA 211
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
N + I + +FP + + L+ + L +P RP++ +V
Sbjct: 212 NTYQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 122 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 174
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++ PE +E D++S G E L G K E N
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANT 213
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ I + +FP + + L+ + L +P RP++ +V
Sbjct: 214 YQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 32/228 (14%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-E 159
+ S ++H NIL+L G + L+ E GT+ R S R + E
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+ANA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGT 172
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++ PE +E D++S G E L G K E
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEA 211
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
N + I + +FP + + L+ + L +P RP++ +V
Sbjct: 212 NTYQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 122 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGTLD 174
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++ PE +E D++S G E L G K E N
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANT 213
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ I + +FP + + L+ + L +P RP++ +V
Sbjct: 214 YQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 176
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++ PE +E D++S G E L G K E N
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANT 215
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ I + +FP + + L+ + L +P RP++ +V
Sbjct: 216 YQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 32/228 (14%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-E 159
+ S ++H NIL+L G + L+ E GT+ R S R + E
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 115
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+ANA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 116 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGT 168
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++ PE +E D++S G E L G K E
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEA 207
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
N + I + +FP + + L+ + L +P RP++ +V
Sbjct: 208 NTYQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 253
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 144
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 145 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 197
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
++ PE +E D++S G E L G
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 228
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
+ E +D+D+P ++V D++T +D+ + + + KHKNI+ L+G C +
Sbjct: 53 MAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ E G LR + A + + ++A + Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ EN K+ DF L+ I + + + + ++APE
Sbjct: 173 LA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 229
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG + E+ T
Sbjct: 230 ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGTLD 171
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++ PE +E D++S G E L G K E N
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANT 210
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ I + +FP + + L+ + L +P RP++ +V
Sbjct: 211 YQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 32/228 (14%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-E 159
+ S ++H NIL+L G + L+ E GT+ R S R + E
Sbjct: 54 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 113
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+ANA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 114 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGT 166
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++ PE +E D++S G E L G K E
Sbjct: 167 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEA 205
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
N + I + +FP + + L+ + L +P RP++ +V
Sbjct: 206 NTYQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 251
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF-IK 217
E+A A+ +LH I++R +K N+LLDE KL DF LS E H ++ +
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKAYSFC 187
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAK 274
G ++APE + D +SFG + E+LTG L F+G + +T++ AK
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT--LPFQGKDRKETMTMILKAK 242
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 32/228 (14%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-E 159
+ S ++H NIL+L G + L+ E GT+ R S R + E
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+ANA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTLCGT 173
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++ PE +E D++S G E L G K E
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEA 212
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
N + I + +FP + + L+ + L +P RP++ +V
Sbjct: 213 NTYQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 258
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 32/228 (14%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-E 159
+ S ++H NIL+L G + L+ E GT+ R S R + E
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+ANA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCGT 169
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++ PE +E D++S G E L G K E
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEA 208
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
N + I + +FP + + L+ + L +P RP++ +V
Sbjct: 209 NTYQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 127 LPTLVFESVKYGTLRGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
LP +V E V TLR + P+ I + IA+A L+ I+ R +K +N++
Sbjct: 107 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-IADACQALNFSHQNGIIHRDVKPANIM 165
Query: 187 LDENYSAKLHDFSLSVSIPE-GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAF 245
+ + K+ DF ++ +I + G + + + G +++PE S + DVYS G
Sbjct: 166 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 225
Query: 246 LCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQS 305
L E+LTG E G+ ++ ++ DPI + E L +
Sbjct: 226 LYEVLTG----EPPFTGDSPVSVAYQHVRE-----------DPIPPS-----ARHEGLSA 265
Query: 306 -LGQLMYKCLSKSPEHR 321
L ++ K L+K+PE+R
Sbjct: 266 DLDAVVLKALAKNPENR 282
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF-IK 217
E+A A+ +LH I++R +K N+LLDE KL DF LS E H ++ +
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKAYSFC 188
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAK 274
G ++APE + D +SFG + E+LTG L F+G + +T++ AK
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT--LPFQGKDRKETMTMILKAK 243
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 127 LPTLVFESVKYGTLRGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
LP +V E V TLR + P+ I + IA+A L+ I+ R +K +N++
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-IADACQALNFSHQNGIIHRDVKPANIM 148
Query: 187 LDENYSAKLHDFSLSVSIPE-GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAF 245
+ + K+ DF ++ +I + G + + + G +++PE S + DVYS G
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 246 LCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQS 305
L E+LTG E G+ ++ ++ DPI + E L +
Sbjct: 209 LYEVLTG----EPPFTGDSPVSVAYQHVRE-----------DPIPPS-----ARHEGLSA 248
Query: 306 -LGQLMYKCLSKSPEHR 321
L ++ K L+K+PE+R
Sbjct: 249 DLDAVVLKALAKNPENR 265
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 159 EIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF-I 216
E+A A+ +LH +G I++R +K N+LLDE KL DF LS E H ++ +
Sbjct: 134 ELALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKAYSF 186
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAK 274
G ++APE + D +SFG + E+LTG L F+G + +T++ AK
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT--LPFQGKDRKETMTMILKAK 242
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 127 LPTLVFESVKYGTLRGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
LP +V E V TLR + P+ I + IA+A L+ I+ R +K +N++
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-IADACQALNFSHQNGIIHRDVKPANIM 148
Query: 187 LDENYSAKLHDFSLSVSIPE-GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAF 245
+ + K+ DF ++ +I + G + + + G +++PE S + DVYS G
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 246 LCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQS 305
L E+LTG E G+ ++ ++ DPI + E L +
Sbjct: 209 LYEVLTG----EPPFTGDSPVSVAYQHVRE-----------DPIPPS-----ARHEGLSA 248
Query: 306 -LGQLMYKCLSKSPEHR 321
L ++ K L+K+PE+R
Sbjct: 249 DLDAVVLKALAKNPENR 265
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 127 LPTLVFESVKYGTLRGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
LP +V E V TLR + P+ I + IA+A L+ I+ R +K +N++
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-IADACQALNFSHQNGIIHRDVKPANIM 148
Query: 187 LDENYSAKLHDFSLSVSIPE-GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAF 245
+ + K+ DF ++ +I + G + + + G +++PE S + DVYS G
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 246 LCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQS 305
L E+LTG E G+ ++ ++ DPI + E L +
Sbjct: 209 LYEVLTG----EPPFTGDSPVSVAYQHVRE-----------DPIPPS-----ARHEGLSA 248
Query: 306 -LGQLMYKCLSKSPEHR 321
L ++ K L+K+PE+R
Sbjct: 249 DLDAVVLKALAKNPENR 265
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 32/221 (14%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI++L G +++ +V E ++ G+L F A + + + IA+ +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF LS + PE R I
Sbjct: 161 KYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE A F DV+S+G L E V+ Y ++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWE--------------------VMSYGERPYWEMS 255
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
++ + DE P + +L QLM C K +RP
Sbjct: 256 NQDVIKAV-DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLD 171
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++ PE +E D++S G E L G K E N
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANT 210
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ I + +FP + + L+ + L +P RP++ +V
Sbjct: 211 YQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 120 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLD 172
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++ PE +E D++S G E L G K E N
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANT 211
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ I + +FP + + L+ + L +P RP++ +V
Sbjct: 212 YQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLD 176
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++ PE +E D++S G E L G K E N
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANT 215
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ I + +FP + + L+ + L +P RP++ +V
Sbjct: 216 YQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTELCGTLD 171
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++ PE +E D++S G E L G K E N
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANT 210
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ I + +FP + + L+ + L +P RP++ +V
Sbjct: 211 YQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 127 LPTLVFESVKYGTLRGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
LP +V E V TLR + P+ I + IA+A L+ I+ R +K +N+L
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-IADACQALNFSHQNGIIHRDVKPANIL 148
Query: 187 LDENYSAKLHDFSLSVSIPE-GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAF 245
+ + K+ DF ++ +I + G + + + G +++PE S + DVYS G
Sbjct: 149 ISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 246 LCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQS 305
L E+LTG E G+ ++ ++ DPI + E L +
Sbjct: 209 LYEVLTG----EPPFTGDSPVSVAYQHVRE-----------DPIPPS-----ARHEGLSA 248
Query: 306 -LGQLMYKCLSKSPEHR 321
L ++ K L+K+PE+R
Sbjct: 249 DLDAVVLKALAKNPENR 265
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 32/221 (14%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI++L G +++ +V E ++ G+L F A + + + IA+ +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF LS + PE R I
Sbjct: 161 KYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE A F DV+S+G L E V+ Y ++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWE--------------------VMSYGERPYWEMS 255
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
++ + DE P + +L QLM C K +RP
Sbjct: 256 NQDVIKAV-DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 102/256 (39%), Gaps = 29/256 (11%)
Query: 83 ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRG 142
++V + TLD+ E + V + H +I+KLIG +E E ++ E YG L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGH 113
Query: 143 F---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFS 199
+ + SL + + +++I A+AYL V R I N+L+ KL DF
Sbjct: 114 YLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFG 170
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
LS I E E + + + +++PE F DV+ F + E+L+ F
Sbjct: 171 LSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS-FGKQPFF 228
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N D + VLE + + P + L LM +C P
Sbjct: 229 WLENKDVIGVLE--------------------KGDRLPKPDLCPPVLYTLMTRCWDYDPS 268
Query: 320 HRPLMVDVAKQLRQMY 335
RP ++ L +Y
Sbjct: 269 DRPRFTELVCSLSDVY 284
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I IA + A + YLH + I+ R +K++N+ L E+ + K+ DF L+ +
Sbjct: 127 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 183
Query: 214 EFIKGAYGFIAPEYFATSSFNE---MCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
E + G+ ++APE N DVY+FG L EL+TG L + N N+ D +
Sbjct: 184 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPY-SNINNRDQIIF 240
Query: 271 EYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ G + + ++ P +++ +LM +CL K + RPL +
Sbjct: 241 MVGR--------GYLSPDLSKVRSNCP------KAMKRLMAECLKKKRDERPLFPQI 283
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 102/256 (39%), Gaps = 29/256 (11%)
Query: 83 ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRG 142
++V + TLD+ E + V + H +I+KLIG +E E ++ E YG L
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGH 101
Query: 143 F---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFS 199
+ + SL + + +++I A+AYL V R I N+L+ KL DF
Sbjct: 102 YLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFG 158
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
LS I E E + + + +++PE F DV+ F + E+L+ F
Sbjct: 159 LSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS-FGKQPFF 216
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N D + VLE + + P + L LM +C P
Sbjct: 217 WLENKDVIGVLE--------------------KGDRLPKPDLCPPVLYTLMTRCWDYDPS 256
Query: 320 HRPLMVDVAKQLRQMY 335
RP ++ L +Y
Sbjct: 257 DRPRFTELVCSLSDVY 272
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 102/256 (39%), Gaps = 29/256 (11%)
Query: 83 ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRG 142
++V + TLD+ E + V + H +I+KLIG +E E ++ E YG L
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGH 97
Query: 143 F---SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFS 199
+ + SL + + +++I A+AYL V R I N+L+ KL DF
Sbjct: 98 YLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFG 154
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
LS I E E + + + +++PE F DV+ F + E+L+ F
Sbjct: 155 LSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSF-GKQPFF 212
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N D + VLE + + P + L LM +C P
Sbjct: 213 WLENKDVIGVLE--------------------KGDRLPKPDLCPPVLYTLMTRCWDYDPS 252
Query: 320 HRPLMVDVAKQLRQMY 335
RP ++ L +Y
Sbjct: 253 DRPRFTELVCSLSDVY 268
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 87/226 (38%), Gaps = 32/226 (14%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ DF S P R + G
Sbjct: 120 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS----RRTTLSGTLD 172
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++ PE +E D++S G E L G K E N
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANT 211
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ I + +FP + + L+ + L +P RP++ +V
Sbjct: 212 YQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 88/220 (40%), Gaps = 32/220 (14%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVA 165
Q H NI++L G +++ +V E ++ G+L F A + + + IA+ +
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYGF 222
YL D V R + A N+L++ N K+ DF LS + PE R I +
Sbjct: 133 YLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRW 187
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRF 282
+PE A F DV+S+G L E V+ Y ++
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWE--------------------VMSYGERPYWEMSN 227
Query: 283 GAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
++ + DE P + +L QLM C K +RP
Sbjct: 228 QDVIKAV-DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 266
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I IA + A + YLH + I+ R +K++N+ L E+ + K+ DF L+ +
Sbjct: 135 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 191
Query: 214 EFIKGAYGFIAPEYFATSSFNE---MCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
E + G+ ++APE N DVY+FG L EL+TG L + N N+ D +
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYS-NINNRDQIIF 248
Query: 271 EYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ G + + ++ P +++ +LM +CL K + RPL +
Sbjct: 249 MVGR--------GYLSPDLSKVRSNCP------KAMKRLMAECLKKKRDERPLFPQI 291
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 32/228 (14%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-E 159
+ S ++H NIL+L G + L+ E GT+ R S R + E
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+ANA++Y H + ++ R IK N+LL K+ DF SV P R + G
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGT 169
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIEN 279
++ PE +E D++S G E L G K E
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEA 208
Query: 280 NRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
N + I + +FP + + L+ + L +P RP++ +V
Sbjct: 209 NTYQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 32/221 (14%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI++L G +++ +V E ++ G+L F A + + + IA+ +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF LS + PE R I
Sbjct: 161 KYLS---DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE A F DV+S+G L E V+ Y ++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWE--------------------VMSYGERPYWEMS 255
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
++ + DE P + +L QLM C K +RP
Sbjct: 256 NQDVIKAV-DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)
Query: 112 HKNILKLIGCCLE--TELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAY 166
H+NI+K G C E L+ E + G+L+ + + + + ++K A++I + Y
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 141
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK----GAYGF 222
L R V R + A NVL++ + K+ DF L+ +I ET +K +
Sbjct: 142 LG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI---ETDKEXXTVKDDRDSPVFW 195
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
APE S F DV+SFG L ELLT C+
Sbjct: 196 YAPECLMQSKFYIASDVWSFGVTLHELLTYCD 227
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
+ E +D+D+P ++V D++T D+ + + + KHKNI+ L+G C +
Sbjct: 42 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 101
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ E G LR + A + + ++A + Y
Sbjct: 102 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 161
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ EN K+ DF L+ I + + + + ++APE
Sbjct: 162 LA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 218
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG + E+ T
Sbjct: 219 ALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 42/239 (17%)
Query: 112 HKNILKLIGCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPR----------- 153
H N++ L+G C + P +V E K+G L + F +AP
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 154 -IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR 212
I + ++A + +L R + R + A N+LL E K+ DF L+ I + +VR
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
+ + ++APE + DV+SFG L E+ + + G D+ E+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EF 260
Query: 273 AKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
++ E R A D + P + Q M C P RP ++ + L
Sbjct: 261 CRRLKEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
+ E +D+D+P ++V D++T D+ + + + KHKNI+ L+G C +
Sbjct: 40 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 99
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ E G LR + A + + ++A + Y
Sbjct: 100 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 159
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ EN K+ DF L+ I + + + + ++APE
Sbjct: 160 LA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 216
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG + E+ T
Sbjct: 217 ALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
+ E +D+D+P ++V D++T D+ + + + KHKNI+ L+G C +
Sbjct: 53 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQ 112
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ E G LR + A + + ++A + Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ EN K+ DF L+ I + + + + ++APE
Sbjct: 173 LA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 229
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG + E+ T
Sbjct: 230 ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 42/239 (17%)
Query: 112 HKNILKLIGCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPR----------- 153
H N++ L+G C + P +V E K+G L + F +AP
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 154 -IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR 212
I + ++A + +L R + R + A N+LL E K+ DF L+ I + +VR
Sbjct: 187 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
+ + ++APE + DV+SFG L E+ + + G D+ E+
Sbjct: 244 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EF 297
Query: 273 AKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
++ E R A D + P + Q M C P RP ++ + L
Sbjct: 298 CRRLKEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
+ E +D+D+P ++V D++T D+ + + + KHKNI+ L+G C +
Sbjct: 45 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 104
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ E G LR + A + + ++A + Y
Sbjct: 105 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 164
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ EN K+ DF L+ I + + + + ++APE
Sbjct: 165 LA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 221
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG + E+ T
Sbjct: 222 ALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
+ E +D+D+P ++V D++T D+ + + + KHKNI+ L+G C +
Sbjct: 53 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQ 112
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ E G LR + A + + ++A + Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ EN K+ DF L+ I + + + + ++APE
Sbjct: 173 LA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 229
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG + E+ T
Sbjct: 230 ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 112 HKNILKLIGCCLE--TELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAY 166
H+NI+K G C E L+ E + G+L+ + + + + ++K A++I + Y
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 129
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI-PEGETHVREEFIKGAYGFIAP 225
L R V R + A NVL++ + K+ DF L+ +I + E ++ + AP
Sbjct: 130 LG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
Query: 226 EYFATSSFNEMCDVYSFGAFLCELLTGCN 254
E S F DV+SFG L ELLT C+
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELLTYCD 215
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 32/221 (14%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI++L G +++ +V E ++ G+L F A + + + IA+ +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF LS + PE R I
Sbjct: 161 KYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE A F DV+S+G L E V+ Y ++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWE--------------------VMSYGERPYWEMS 255
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
++ + DE P + +L QLM C K +RP
Sbjct: 256 NQDVIKAV-DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 23/173 (13%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I IA + A + YLH + I+ R +K++N+ L E+ + K+ DF L+ +
Sbjct: 134 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 190
Query: 214 EFIKGAYGFIAPEYFATSSFNE---MCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
E + G+ ++APE N DVY+FG L EL+TG L + N N+ D +
Sbjct: 191 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPY-SNINNRDQIIF 247
Query: 271 EYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPL 323
+ G + + ++ P +++ +LM +CL K + RPL
Sbjct: 248 MVGR--------GYLSPDLSKVRSNCP------KAMKRLMAECLKKKRDERPL 286
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 42/239 (17%)
Query: 112 HKNILKLIGCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPR----------- 153
H N++ L+G C + P +V E K+G L + F +AP
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 154 -IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR 212
I + ++A + +L R + R + A N+LL E K+ DF L+ I + +VR
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
+ + ++APE + DV+SFG L E+ + + G D+ E+
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EF 251
Query: 273 AKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
++ E R A D + P + Q M C P RP ++ + L
Sbjct: 252 CRRLKEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 32/221 (14%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI++L G +++ +V E ++ G+L F A + + + IA+ +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF LS + PE R I
Sbjct: 161 KYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE A F DV+S+G L E V+ Y ++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWE--------------------VMSYGERPYWEMS 255
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
++ + DE P + +L QLM C K +RP
Sbjct: 256 NQDVIKAV-DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 32/221 (14%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI++L G +++ +V E ++ G+L F A + + + IA+ +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF LS + PE R I
Sbjct: 161 KYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE A F DV+S+G L E V+ Y ++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWE--------------------VMSYGERPYWEMS 255
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
++ + DE P + +L QLM C K +RP
Sbjct: 256 NQDVIKAV-DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
+ E +D+D+P ++V D++T D+ + + + KHKNI+ L+G C +
Sbjct: 99 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ E G LR + A + + ++A + Y
Sbjct: 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 218
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ EN K+ DF L+ I + + + + ++APE
Sbjct: 219 LA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 275
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG + E+ T
Sbjct: 276 ALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 23/173 (13%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I IA + A + YLH + I+ R +K++N+ L E+ + K+ DF L+ +
Sbjct: 135 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 191
Query: 214 EFIKGAYGFIAPEYFATSSFNE---MCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
E + G+ ++APE N DVY+FG L EL+TG L + N N+ D +
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYS-NINNRDQIIF 248
Query: 271 EYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPL 323
+ G + + ++ P +++ +LM +CL K + RPL
Sbjct: 249 MVGR--------GYLSPDLSKVRSNCP------KAMKRLMAECLKKKRDERPL 287
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 32/221 (14%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI++L G +++ +V E ++ G+L F A + + + IA+ +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF LS + PE R I
Sbjct: 161 KYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE A F DV+S+G L E V+ Y ++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWE--------------------VMSYGERPYWEMS 255
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
++ + DE P + +L QLM C K +RP
Sbjct: 256 NQDVIKAV-DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 42/239 (17%)
Query: 112 HKNILKLIGCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPR----------- 153
H N++ L+G C + P +V E K+G L + F +AP
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 154 -IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR 212
I + ++A + +L R + R + A N+LL E K+ DF L+ I + +VR
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
+ + ++APE + DV+SFG L E+ + + G D+ E+
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EF 251
Query: 273 AKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
++ E R A D + P + Q M C P RP ++ + L
Sbjct: 252 CRRLKEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 32/221 (14%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI++L G +++ +V E ++ G+L F A + + + IA+ +
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 148
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF LS + PE R I
Sbjct: 149 KYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 203
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE A F DV+S+G L E V+ Y ++
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWE--------------------VMSYGERPYWEMS 243
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
++ + DE P + +L QLM C K +RP
Sbjct: 244 NQDVIKAV-DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 283
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
+ E +D+D+P ++V D++T D+ + + + KHKNI+ L+G C +
Sbjct: 53 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ E G LR + A + + ++A + Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ EN K+ DF L+ I + + + ++APE
Sbjct: 173 LA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPE 229
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG + E+ T
Sbjct: 230 ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 32/221 (14%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI++L G +++ +V E ++ G+L F A + + + IA+ +
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 158
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF LS + PE R I
Sbjct: 159 KYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 213
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE A F DV+S+G L E V+ Y ++
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWE--------------------VMSYGERPYWEMS 253
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
++ + DE P + +L QLM C K +RP
Sbjct: 254 NQDVIKAV-DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 293
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 88/220 (40%), Gaps = 32/220 (14%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVA 165
Q H NI++L G +++ +V E ++ G+L F A + + + IA+ +
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYGF 222
YL D V R + A N+L++ N K+ DF LS + PE R I +
Sbjct: 133 YLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRW 187
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRF 282
+PE A F DV+S+G L E V+ Y ++
Sbjct: 188 TSPEAIAYRKFTSASDVWSYGIVLWE--------------------VMSYGERPYWEMSN 227
Query: 283 GAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
++ + DE P + +L QLM C K +RP
Sbjct: 228 QDVIKAV-DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 266
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I IA + A + YLH + I+ R +K++N+ L E+ + K+ DF L+ +
Sbjct: 107 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 163
Query: 214 EFIKGAYGFIAPEYFATSSFNE---MCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
E + G+ ++APE N DVY+FG L EL+TG L + N N+ D +
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPY-SNINNRDQIIF 220
Query: 271 EYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ G + + ++ P +++ +LM +CL K + RPL +
Sbjct: 221 MVGR--------GYLSPDLSKVRSNCP------KAMKRLMAECLKKKRDERPLFPQI 263
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
+ E +D+D+P ++V D++T D+ + + + KHKNI+ L+G C +
Sbjct: 53 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ E G LR + A + + ++A + Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ EN K+ DF L+ I + + + ++APE
Sbjct: 173 LA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPE 229
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG + E+ T
Sbjct: 230 ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 93/239 (38%), Gaps = 42/239 (17%)
Query: 112 HKNILKLIGCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPR----------- 153
H N++ L+G C + P +V E K+G L + F +AP
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 154 -IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR 212
I + ++A + +L R + R + A N+LL E K+ DF L+ I + VR
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
+ + ++APE + DV+SFG L E+ + + G D+ E+
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EF 251
Query: 273 AKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
++ E R A D + P + Q M C P RP ++ + L
Sbjct: 252 CRRLKEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 93/239 (38%), Gaps = 42/239 (17%)
Query: 112 HKNILKLIGCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPR----------- 153
H N++ L+G C + P +V E K+G L + F +AP
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 154 -IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR 212
I + ++A + +L R + R + A N+LL E K+ DF L+ I + VR
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
+ + ++APE + DV+SFG L E+ + + G D+ E+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EF 260
Query: 273 AKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
++ E R A D + P + Q M C P RP ++ + L
Sbjct: 261 CRRLKEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 93/239 (38%), Gaps = 42/239 (17%)
Query: 112 HKNILKLIGCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPR----------- 153
H N++ L+G C + P +V E K+G L + F +AP
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 154 -IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR 212
I + ++A + +L R + R + A N+LL E K+ DF L+ I + VR
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
+ + ++APE + DV+SFG L E+ + + G D+ E+
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EF 251
Query: 273 AKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
++ E R A D + P + Q M C P RP ++ + L
Sbjct: 252 CRRLKEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 38/235 (16%)
Query: 112 HKNILKLIGCCLETELPTLVF-ESVKYGTLRGFSFAS--------------LLIAPRIKI 156
H N++ L+G C + P +V E K+G L + + L + I
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ ++A + +L R + R + A N+LL E K+ DF L+ I + +VR+
Sbjct: 150 SFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
+ ++APE + DV+SFG L E+ + + G D+ E+ ++
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EFXRRL 260
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
E R A D + P + Q M C P RP ++ + L
Sbjct: 261 KEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + A IK+ +I +
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGM 130
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 131 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
+ E +D+D+P ++V D++T D+ + + + KHKNI+ L+G C +
Sbjct: 53 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ E G LR + A + + ++A + Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ EN ++ DF L+ I + + + + ++APE
Sbjct: 173 LA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 229
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG + E+ T
Sbjct: 230 ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ +F SV P R + G
Sbjct: 122 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLD 174
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++ PE +E D++S G E L G K E N
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANT 213
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ I + +FP + + L+ + L +P RP++ +V
Sbjct: 214 YQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I IA + A + YLH + I+ R +K++N+ L E+ + K+ DF L+ +
Sbjct: 109 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 165
Query: 214 EFIKGAYGFIAPEYFATSSFNE---MCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
E + G+ ++APE N DVY+FG L EL+TG L + N N+ D +
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPY-SNINNRDQIIF 222
Query: 271 EYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ G + + ++ P +++ +LM +CL K + RPL +
Sbjct: 223 MVGR--------GYLSPDLSKVRSNCP------KAMKRLMAECLKKKRDERPLFPQI 265
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 25/169 (14%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I + +IA +A++ R + R ++A+N+L+ + K+ DF L+ I + E RE
Sbjct: 114 IDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 170
Query: 214 EFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYA 273
K + APE SF DV+SFG L E++T + + G N + + LE
Sbjct: 171 G-AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI-PYPGMSNPEVIRALERG 228
Query: 274 KKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+ P E + L +M +C PE RP
Sbjct: 229 YR--------------------MPRPENCPEELYNIMMRCWKNRPEERP 257
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 88/226 (38%), Gaps = 32/226 (14%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAM-EIA 161
+ S ++H NIL+L G + L+ E GT+ R S R + E+A
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 120
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
NA++Y H + ++ R IK N+LL K+ +F SV P R + G
Sbjct: 121 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----RRTTLCGTLD 173
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
++ PE +E D++S G E L G K E N
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG---------------------KPPFEANT 212
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ I + +FP + + L+ + L +P RP++ +V
Sbjct: 213 YQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLREV 256
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
+ E +D+D+P ++V D++T D+ + + + KHKNI+ L+G C +
Sbjct: 53 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ E G LR + A + + ++A + Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ EN K+ DF L+ I + + + ++APE
Sbjct: 173 LA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPE 229
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG + E+ T
Sbjct: 230 ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVK----YGTLRGFS-FASLLIAPRIKI 156
+ S ++H NIL+L G + L+ E Y L+ S F A I
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI-- 119
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
E+ANA++Y H + ++ R IK N+LL K+ DF SV P R +
Sbjct: 120 -TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRXXL 171
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++ PE +E D++S G E L G
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
L E +D+D+P ++V ++T D+ + + + KHKNI+ L+G C +
Sbjct: 46 LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 105
Query: 125 TELPTLVFESVKYGTLR---------GFSFA---------SLLIAPRIKIAMEIANAVAY 166
++ E G LR G F+ L + A ++A + Y
Sbjct: 106 DGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEY 165
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ E+ K+ DF L+ I + + + ++APE
Sbjct: 166 L---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPE 222
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG L E+ T
Sbjct: 223 ALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I IA + A + YLH + I+ R +K++N+ L E+ + K+ DF L+ +
Sbjct: 112 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 214 EFIKGAYGFIAPEYFATSSFNE---MCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
E + G+ ++APE N DVY+FG L EL+TG L + N N+ D +
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYS-NINNRDQIIF 225
Query: 271 EYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ G + + ++ P +++ +LM +CL K + RPL +
Sbjct: 226 MVGR--------GYLSPDLSKVRSNCP------KAMKRLMAECLKKKRDERPLFPQI 268
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I IA + A + YLH + I+ R +K++N+ L E+ + K+ DF L+ +
Sbjct: 112 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 214 EFIKGAYGFIAPEYFATSSFNE---MCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
E + G+ ++APE N DVY+FG L EL+TG L + N N+ D +
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYS-NINNRDQIIF 225
Query: 271 EYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ G + + ++ P +++ +LM +CL K + RPL +
Sbjct: 226 MVGR--------GYLSPDLSKVRSNCP------KAMKRLMAECLKKKRDERPLFPQI 268
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I IA + A + YLH + I+ R +K++N+ L E+ + K+ DF L+ +
Sbjct: 107 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 214 EFIKGAYGFIAPEYFATSSFNE---MCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
E + G+ ++APE N DVY+FG L EL+TG L + N N+ D +
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYS-NINNRDQIIF 220
Query: 271 EYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ G + + ++ P +++ +LM +CL K + RPL +
Sbjct: 221 MVGR--------GYLSPDLSKVRSNCP------KAMKRLMAECLKKKRDERPLFPQI 263
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 93/239 (38%), Gaps = 42/239 (17%)
Query: 112 HKNILKLIGCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPR----------- 153
H N++ L+G C + P +V E K+G L + F +AP
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 154 -IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR 212
I + ++A + +L R + R + A N+LL E K+ DF L+ I + VR
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
+ + ++APE + DV+SFG L E+ + + G D+ E+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EF 260
Query: 273 AKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
++ E R A D + P + Q M C P RP ++ + L
Sbjct: 261 CRRLKEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I IA + A + YLH + I+ R +K++N+ L E+ + K+ DF L+ +
Sbjct: 107 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 214 EFIKGAYGFIAPEYFATSSFNE---MCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
E + G+ ++APE N DVY+FG L EL+TG L + N N+ D +
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYS-NINNRDQIIF 220
Query: 271 EYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
+ G + + ++ P +++ +LM +CL K + RPL +
Sbjct: 221 MVGR--------GYLSPDLSKVRSNCP------KAMKRLMAECLKKKRDERPLFPQI 263
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVA 165
Q+ + I+++IG C E E LV E + G L + + + + I++ +++ +
Sbjct: 63 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 121
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE-FIKGAYGFIA 224
YL + V R + A NVLL + AK+ DF LS ++ E + + + K + A
Sbjct: 122 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 178
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F+ DV+SFG + E + Y +K + G+
Sbjct: 179 PECINYYKFSSKSDVWSFGVLMWEAFS--------------------YGQKPYRGMK-GS 217
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
V + ++ + + LM C + E+RP V +LR Y VV
Sbjct: 218 EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 272
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 39/238 (16%)
Query: 112 HKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA--PRIKIAMEIANAVA---Y 166
H NI+ L+G C L E +G L F S ++ P IA A+ ++
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 167 LHVGFD----------RPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
LH D + + R + A N+L+ ENY AK+ DF LS E +V++
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRG---QEVYVKKTMG 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
+ ++A E S + DV+S+G L E+++ G +T E +K
Sbjct: 199 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-------LGGTPYCGMTCAELYEKL 251
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+ R + P+ +D + LM +C + P RP + L +M
Sbjct: 252 PQGYR---LEKPLNCDDEVY-----------DLMRQCWREKPYERPSFAQILVSLNRM 295
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 32/221 (14%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI++L G +++ +V E ++ G+L F A + + + IA+ +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF L+ + PE R I
Sbjct: 161 KYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI--PIR 215
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE A F DV+S+G L E V+ Y ++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWE--------------------VMSYGERPYWEMS 255
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
++ + DE P + +L QLM C K +RP
Sbjct: 256 NQDVIKAV-DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVA 165
Q+ + I+++IG C E E LV E + G L + + + + I++ +++ +
Sbjct: 61 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 119
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE-FIKGAYGFIA 224
YL + V R + A NVLL + AK+ DF LS ++ E + + + K + A
Sbjct: 120 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 176
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F+ DV+SFG + E + Y +K + G+
Sbjct: 177 PECINYYKFSSKSDVWSFGVLMWEAFS--------------------YGQKPYRGMK-GS 215
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
V + ++ + + LM C + E+RP V +LR Y VV
Sbjct: 216 EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 270
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 25/169 (14%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I + +IA +A++ R + R ++A+N+L+ + K+ DF L+ I + E RE
Sbjct: 287 IDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 343
Query: 214 EFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYA 273
K + APE SF DV+SFG L E++T + + G N + + LE
Sbjct: 344 G-AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI-PYPGMSNPEVIRALERG 401
Query: 274 KKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+ P E + L +M +C PE RP
Sbjct: 402 YR--------------------MPRPENCPEELYNIMMRCWKNRPEERP 430
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
L E +D+D+P ++V ++T D+ + + + KHKNI+ L+G C +
Sbjct: 35 LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 94
Query: 125 TELPTLVFESVKYGTLR---------GFSFA---------SLLIAPRIKIAMEIANAVAY 166
++ E G LR G ++ L + A ++A + Y
Sbjct: 95 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 154
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ E+ K+ DF L+ I + + + + ++APE
Sbjct: 155 L---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 211
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG L E+ T
Sbjct: 212 ALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
L E +D+D+P ++V ++T D+ + + + KHKNI+ L+G C +
Sbjct: 38 LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 97
Query: 125 TELPTLVFESVKYGTLR---------GFSFA---------SLLIAPRIKIAMEIANAVAY 166
++ E G LR G ++ L + A ++A + Y
Sbjct: 98 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 157
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ E+ K+ DF L+ I + + + + ++APE
Sbjct: 158 L---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 214
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG L E+ T
Sbjct: 215 ALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVA 165
Q+ + I+++IG C E E LV E + G L + + + + I++ +++ +
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 125
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE-FIKGAYGFIA 224
YL + V R + A NVLL + AK+ DF LS ++ E + + + K + A
Sbjct: 126 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 182
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F+ DV+SFG + E + Y +K + G+
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFS--------------------YGQKPYRGMK-GS 221
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
V + ++ + + LM C + E+RP V +LR Y VV
Sbjct: 222 EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 276
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
L E +D+D+P ++V ++T D+ + + + KHKNI+ L+G C +
Sbjct: 46 LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 105
Query: 125 TELPTLVFESVKYGTLR---------GFSFA---------SLLIAPRIKIAMEIANAVAY 166
++ E G LR G ++ L + A ++A + Y
Sbjct: 106 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 165
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ E+ K+ DF L+ I + + + + ++APE
Sbjct: 166 L---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 222
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG L E+ T
Sbjct: 223 ALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 37/241 (15%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL--RGFSFA-SLLIAPRIKIAMEI 160
+ S + H NI+KL G L P +V E V G L R A + + ++++ ++I
Sbjct: 74 VFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDI 131
Query: 161 ANAVAYLHVGFDRPIVFRCIKASNVLL---DENYS--AKLHDFSLSVSIPEGETHVREEF 215
A + Y+ + PIV R +++ N+ L DEN AK+ DFSLS + H
Sbjct: 132 ALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSVSGL 186
Query: 216 IKGAYGFIAPEYFATS--SFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYA 273
+ G + ++APE S+ E D YSF L +LT G G D+ + Y
Sbjct: 187 L-GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT--------GEGPFDEYS---YG 234
Query: 274 KKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQ 333
K N + P ED +L+++ +L C S P+ RP + K+L +
Sbjct: 235 KIKFINMIREEGLRPTIPEDCP-----PRLRNVIEL---CWSGDPKKRPHFSYIVKELSE 286
Query: 334 M 334
+
Sbjct: 287 L 287
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 39/238 (16%)
Query: 112 HKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA--PRIKIAMEIANAVA---Y 166
H NI+ L+G C L E +G L F S ++ P IA A+ ++
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 167 LHVGFD----------RPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
LH D + + R + A N+L+ ENY AK+ DF LS E +V++
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG---QEVYVKKTMG 201
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
+ ++A E S + DV+S+G L E+++ G +T E +K
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-------LGGTPYCGMTCAELYEKL 254
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+ R + P+ +D + LM +C + P RP + L +M
Sbjct: 255 PQGYR---LEKPLNCDDEVY-----------DLMRQCWREKPYERPSFAQILVSLNRM 298
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
L E +D+D+P ++V ++T D+ + + + KHKNI+ L+G C +
Sbjct: 39 LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 98
Query: 125 TELPTLVFESVKYGTLR---------GFSFA---------SLLIAPRIKIAMEIANAVAY 166
++ E G LR G ++ L + A ++A + Y
Sbjct: 99 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 158
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ E+ K+ DF L+ I + + + + ++APE
Sbjct: 159 L---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 215
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG L E+ T
Sbjct: 216 ALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVA 165
Q+ + I+++IG C E E LV E + G L + + + + I++ +++ +
Sbjct: 73 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 131
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE-FIKGAYGFIA 224
YL + V R + A NVLL + AK+ DF LS ++ E + + + K + A
Sbjct: 132 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 188
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F+ DV+SFG + E + Y +K + G+
Sbjct: 189 PECINYYKFSSKSDVWSFGVLMWEAFS--------------------YGQKPYRGMK-GS 227
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
V + ++ + + LM C + E+RP V +LR Y VV
Sbjct: 228 EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVA 165
Q+ + I+++IG C E E LV E + G L + + + + I++ +++ +
Sbjct: 83 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 141
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE-FIKGAYGFIA 224
YL + V R + A NVLL + AK+ DF LS ++ E + + + K + A
Sbjct: 142 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 198
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F+ DV+SFG + E + Y +K + G+
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFS--------------------YGQKPYRGMK-GS 237
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
V + ++ + + LM C + E+RP V +LR Y VV
Sbjct: 238 EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 292
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVA 165
Q+ + I+++IG C E E LV E + G L + + + + I++ +++ +
Sbjct: 83 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 141
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE-FIKGAYGFIA 224
YL + V R + A NVLL + AK+ DF LS ++ E + + + K + A
Sbjct: 142 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 198
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F+ DV+SFG + E + Y +K + G+
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFS--------------------YGQKPYRGMK-GS 237
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
V + ++ + + LM C + E+RP V +LR Y VV
Sbjct: 238 EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 292
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
L E +D+D+P ++V ++T D+ + + + KHKNI+ L+G C +
Sbjct: 46 LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 105
Query: 125 TELPTLVFESVKYGTLR---------GFSFA---------SLLIAPRIKIAMEIANAVAY 166
++ E G LR G ++ L + A ++A + Y
Sbjct: 106 DGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 165
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ E+ K+ DF L+ I + + + + ++APE
Sbjct: 166 L---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 222
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG L E+ T
Sbjct: 223 ALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFA----SLLIA-----------P 152
+ ++H++I+K G C+E + +VFE +K+G L F A ++L+A
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 153 RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR 212
+ IA +IA + YL + V R + N L+ EN K+ DF +S + + +
Sbjct: 130 MLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
++ PE F DV+S G L E+ T
Sbjct: 187 GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 91/236 (38%), Gaps = 36/236 (15%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H N++ L G ++ ++ E ++ G+L F + + + + IA +
Sbjct: 63 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGM 122
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG--- 221
YL D V R + A N+L++ N K+ DF LS + E + A G
Sbjct: 123 KYLA---DMNYVHRALAARNILVNSNLVCKVSDFGLSRFL---EDDTSDPTYTSALGGKI 176
Query: 222 ---FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIE 278
+ APE F DV+S+G + E V+ Y ++
Sbjct: 177 PIRWTAPEAIQYRKFTSASDVWSYGIVMWE--------------------VMSYGERPYW 216
Query: 279 NNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+ +++ I ++D P + +L QLM C K HRP + L +M
Sbjct: 217 DMTNQDVINAI-EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 87/221 (39%), Gaps = 32/221 (14%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI++L G +++ +V E ++ G+L F A + + + IA+ +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF L + PE R I
Sbjct: 161 KYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI--PIR 215
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ +PE A F DV+S+G L E V+ Y ++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWE--------------------VMSYGERPYWEMS 255
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
++ + DE P + +L QLM C K +RP
Sbjct: 256 NQDVIKAV-DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRP 295
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 22/225 (9%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLD--DVEYCFNN 103
SA D + NY L K I ++ V R ++V K D + L+ ++ F
Sbjct: 6 SATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAV-KIIDKTQLNPTSLQKLFRE 64
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
+ + H NI+KL + LV E G + F L+ R+K
Sbjct: 65 VRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAKF 120
Query: 158 MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
+I +AV Y H + IV R +KA N+LLD + + K+ DF S G + +
Sbjct: 121 RQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN---KLDTFC 174
Query: 218 GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTGCNVLEFKGN 261
G+ + APE F ++ DV+S G L L++G L F G
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS--LPFDGQ 217
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 69 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 128
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + + +E + +
Sbjct: 129 EYL--GTKR-YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY 185
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 186 APESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 39/238 (16%)
Query: 112 HKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA--PRIKIAMEIANAVA---Y 166
H NI+ L+G C L E +G L F S ++ P IA A+ ++
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 167 LHVGFD----------RPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
LH D + + R + A N+L+ ENY AK+ DF LS E +V++
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG---QEVYVKKTMG 191
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
+ ++A E S + DV+S+G L E+++ G +T E +K
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-------LGGTPYCGMTCAELYEKL 244
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+ R + P+ +D + LM +C + P RP + L +M
Sbjct: 245 PQGYR---LEKPLNCDDEVY-----------DLMRQCWREKPYERPSFAQILVSLNRM 288
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVA 165
Q+ + I+++IG C E E LV E + G L + + + + I++ +++ +
Sbjct: 81 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 139
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE-FIKGAYGFIA 224
YL + V R + A NVLL + AK+ DF LS ++ E + + + K + A
Sbjct: 140 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 196
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F+ DV+SFG + E + Y +K + G+
Sbjct: 197 PECINYYKFSSKSDVWSFGVLMWEAFS--------------------YGQKPYRGMK-GS 235
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
V + ++ + + LM C + E+RP V +LR Y VV
Sbjct: 236 EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 290
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 18/151 (11%)
Query: 112 HKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIK----IAMEIANAVAYL 167
H +I+ LI + LVF+ ++ G L F + + +A K I + AV++L
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGEL--FDYLTEKVALSEKETRSIMRSLLEAVSFL 216
Query: 168 HVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEY 227
H IV R +K N+LLD+N +L DF S + GE +RE + G G++APE
Sbjct: 217 HAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK-LRE--LCGTPGYLAPEI 270
Query: 228 FATS------SFNEMCDVYSFGAFLCELLTG 252
S + + D+++ G L LL G
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
L E +D+D+P ++V ++T D+ + + + KHKNI+ L+G C +
Sbjct: 31 LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 90
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ E G LR + A L + A ++A + Y
Sbjct: 91 DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEY 150
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ E+ K+ DF L+ I + + + + ++APE
Sbjct: 151 L---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 207
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG L E+ T
Sbjct: 208 ALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAV 164
++KH +++L E + +V E + G+L F +L + + +A ++A +
Sbjct: 60 KLKHDKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGM 118
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+ + R ++++N+L+ K+ DF L+ I + E R+ K + A
Sbjct: 119 AYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQG-AKFPIKWTA 174
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F DV+SFG L EL+T V + G N + L +E +
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELVTKGRV-PYPGMNNREVLEQVERGYR--------- 224
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P ++ SL +LM C K PE RP
Sbjct: 225 -----------MPCPQDCPISLHELMIHCWKKDPEERP 251
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 51/248 (20%)
Query: 107 SSQMKHKN---ILKLIGCCLETELPTLVFESVKYGTLRGFSFASL--------LIAP--- 152
+S MK N +++L+G + + ++ E + G L+ + SL ++AP
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY-LRSLRPEMENNPVLAPPSL 159
Query: 153 --RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
I++A EIA+ +AYL+ V R + A N ++ E+++ K+ DF ++ I E +
Sbjct: 160 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY- 215
Query: 211 VREEFIKGAYG-----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
+ KG G +++PE F DV+SFG L E+ T ++G N+
Sbjct: 216 ----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQ 270
Query: 266 DLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
L RF + + D+ ++ P L +LM C +P+ RP +
Sbjct: 271 VL-------------RF-VMEGGLLDKPDNCP------DMLFELMRMCWQYNPKMRPSFL 310
Query: 326 DVAKQLRQ 333
++ +++
Sbjct: 311 EIISSIKE 318
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 51/248 (20%)
Query: 107 SSQMKHKN---ILKLIGCCLETELPTLVFESVKYGTLRGFSFASL--------LIAP--- 152
+S MK N +++L+G + + ++ E + G L+ + SL ++AP
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY-LRSLRPEMENNPVLAPPSL 130
Query: 153 --RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
I++A EIA+ +AYL+ V R + A N ++ E+++ K+ DF ++ I E +
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY- 186
Query: 211 VREEFIKGAYG-----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
+ KG G +++PE F DV+SFG L E+ T ++G N+
Sbjct: 187 ----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQ 241
Query: 266 DLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
L RF + + D+ ++ P L +LM C +P+ RP +
Sbjct: 242 VL-------------RF-VMEGGLLDKPDNCP------DMLFELMRMCWQYNPKMRPSFL 281
Query: 326 DVAKQLRQ 333
++ +++
Sbjct: 282 EIISSIKE 289
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
L E +D+D+P ++V ++T D+ + + + KHKNI+ L+G C +
Sbjct: 46 LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 105
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ E G LR + A L + A ++A + Y
Sbjct: 106 DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEY 165
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ E+ K+ DF L+ I + + + + ++APE
Sbjct: 166 L---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 222
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG L E+ T
Sbjct: 223 ALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Query: 130 LVFESVKYGTLRGF--SFASLLIAPRIKI-AMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
LV E + G LR F + L A R+ + + +I + YL R V R + A N+L
Sbjct: 90 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 146
Query: 187 LDENYSAKLHDFSLSVSIP-EGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAF 245
++ K+ DF L+ +P + + +V E + + APE + + F+ DV+SFG
Sbjct: 147 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 206
Query: 246 LCELLTGCN-----VLEF-KGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGK 299
L EL T C+ EF + G++ D+ L + +E P
Sbjct: 207 LYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEG-------------QRLPAP 253
Query: 300 EEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ +LM C + SP+ RP + QL ++
Sbjct: 254 PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 289
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGF----SFASLLIAPRIKIAMEIANAVA 165
++H +++L + E ++ E + G+L F +L+ I + +IA +A
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA 123
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAP 225
Y+ + + R ++A+NVL+ E+ K+ DF L+ I + E RE K + AP
Sbjct: 124 YIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG-AKFPIKWTAP 179
Query: 226 EYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLE--YAKKSIEN 279
E F +V+SFG L E++T + + G N D ++ L Y +EN
Sbjct: 180 EAINFGCFTIKSNVWSFGILLYEIVTYGKI-PYPGRTNADVMSALSQGYRMPRMEN 234
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 51/248 (20%)
Query: 107 SSQMKHKN---ILKLIGCCLETELPTLVFESVKYGTLRGFSFASL--------LIAP--- 152
+S MK N +++L+G + + ++ E + G L+ + SL ++AP
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY-LRSLRPEMENNPVLAPPSL 130
Query: 153 --RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
I++A EIA+ +AYL+ V R + A N ++ E+++ K+ DF ++ I E +
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY- 186
Query: 211 VREEFIKGAYG-----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
+ KG G +++PE F DV+SFG L E+ T ++G N+
Sbjct: 187 ----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQ 241
Query: 266 DLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
L RF + + D+ ++ P L +LM C +P+ RP +
Sbjct: 242 VL-------------RF-VMEGGLLDKPDNCP------DMLFELMRMCWQYNPKMRPSFL 281
Query: 326 DVAKQLRQ 333
++ +++
Sbjct: 282 EIISSIKE 289
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
L E +D+D+P ++V ++T D+ + + + KHKNI+ L+G C +
Sbjct: 87 LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146
Query: 125 TELPTLVFESVKYGTLR---------GFSFA---------SLLIAPRIKIAMEIANAVAY 166
++ E G LR G ++ L + A ++A + Y
Sbjct: 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 206
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ E+ K+ DF L+ I + + + + ++APE
Sbjct: 207 LA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE 263
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG L E+ T
Sbjct: 264 ALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 51/248 (20%)
Query: 107 SSQMKHKN---ILKLIGCCLETELPTLVFESVKYGTLRGFSFASL--------LIAP--- 152
+S MK N +++L+G + + ++ E + G L+ + SL ++AP
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY-LRSLRPEMENNPVLAPPSL 124
Query: 153 --RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
I++A EIA+ +AYL+ V R + A N ++ E+++ K+ DF ++ I E +
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY- 180
Query: 211 VREEFIKGAYG-----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
+ KG G +++PE F DV+SFG L E+ T ++G N+
Sbjct: 181 ----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQ 235
Query: 266 DLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
L RF + + D+ ++ P L +LM C +P+ RP +
Sbjct: 236 VL-------------RF-VMEGGLLDKPDNCP------DMLFELMRMCWQYNPKMRPSFL 275
Query: 326 DVAKQLRQ 333
++ +++
Sbjct: 276 EIISSIKE 283
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 51/248 (20%)
Query: 107 SSQMKHKN---ILKLIGCCLETELPTLVFESVKYGTLRGFSFASL--------LIAP--- 152
+S MK N +++L+G + + ++ E + G L+ + SL ++AP
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY-LRSLRPEMENNPVLAPPSL 122
Query: 153 --RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
I++A EIA+ +AYL+ V R + A N ++ E+++ K+ DF ++ I E +
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 211 VREEFIKGAYG-----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
KG G +++PE F DV+SFG L E+ T ++G N+
Sbjct: 180 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQ 233
Query: 266 DLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
L RF + + D+ ++ P L +LM C +P+ RP +
Sbjct: 234 VL-------------RF-VMEGGLLDKPDNCP------DMLLELMRMCWQYNPKMRPSFL 273
Query: 326 DVAKQLRQ 333
++ +++
Sbjct: 274 EIISSIKE 281
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 51/248 (20%)
Query: 107 SSQMKHKN---ILKLIGCCLETELPTLVFESVKYGTLRGFSFASL--------LIAP--- 152
+S MK N +++L+G + + ++ E + G L+ + SL ++AP
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY-LRSLRPEMENNPVLAPPSL 131
Query: 153 --RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
I++A EIA+ +AYL+ V R + A N ++ E+++ K+ DF ++ I E +
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY- 187
Query: 211 VREEFIKGAYG-----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
+ KG G +++PE F DV+SFG L E+ T ++G N+
Sbjct: 188 ----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQ 242
Query: 266 DLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
L RF + + D+ ++ P L +LM C +P+ RP +
Sbjct: 243 VL-------------RF-VMEGGLLDKPDNCP------DMLFELMRMCWQYNPKMRPSFL 282
Query: 326 DVAKQLRQ 333
++ +++
Sbjct: 283 EIISSIKE 290
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
+ E +D+D+P ++V D++T D+ + + + KHKNI+ L+G C +
Sbjct: 53 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ G LR + A + + ++A + Y
Sbjct: 113 DGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ EN K+ DF L+ I + + + + ++APE
Sbjct: 173 LA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 229
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG + E+ T
Sbjct: 230 ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 51/248 (20%)
Query: 107 SSQMKHKN---ILKLIGCCLETELPTLVFESVKYGTLRGFSFASL--------LIAP--- 152
+S MK N +++L+G + + ++ E + G L+ + SL ++AP
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY-LRSLRPEMENNPVLAPPSL 128
Query: 153 --RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
I++A EIA+ +AYL+ V R + A N ++ E+++ K+ DF ++ I E +
Sbjct: 129 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY- 184
Query: 211 VREEFIKGAYG-----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
+ KG G +++PE F DV+SFG L E+ T ++G N+
Sbjct: 185 ----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQ 239
Query: 266 DLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
L RF + + D+ ++ P L +LM C +P+ RP +
Sbjct: 240 VL-------------RF-VMEGGLLDKPDNCP------DMLFELMRMCWQYNPKMRPSFL 279
Query: 326 DVAKQLRQ 333
++ +++
Sbjct: 280 EIISSIKE 287
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 51/248 (20%)
Query: 107 SSQMKHKN---ILKLIGCCLETELPTLVFESVKYGTLRGFSFASL--------LIAP--- 152
+S MK N +++L+G + + ++ E + G L+ + SL ++AP
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY-LRSLRPEMENNPVLAPPSL 131
Query: 153 --RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
I++A EIA+ +AYL+ V R + A N ++ E+++ K+ DF ++ I E +
Sbjct: 132 SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 211 VREEFIKGAYG-----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
KG G +++PE F DV+SFG L E+ T ++G N+
Sbjct: 189 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQ 242
Query: 266 DLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
L RF + + D+ ++ P L +LM C +P+ RP +
Sbjct: 243 VL-------------RF-VMEGGLLDKPDNCP------DMLFELMRMCWQYNPKMRPSFL 282
Query: 326 DVAKQLRQ 333
++ +++
Sbjct: 283 EIISSIKE 290
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 51/248 (20%)
Query: 107 SSQMKHKN---ILKLIGCCLETELPTLVFESVKYGTLRGFSFASL--------LIAP--- 152
+S MK N +++L+G + + ++ E + G L+ + SL ++AP
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY-LRSLRPAMANNPVLAPPSL 127
Query: 153 --RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
I++A EIA+ +AYL+ V R + A N ++ E+++ K+ DF ++ I E +
Sbjct: 128 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY- 183
Query: 211 VREEFIKGAYG-----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
+ KG G +++PE F DV+SFG L E+ T ++G N+
Sbjct: 184 ----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQ 238
Query: 266 DLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
L RF + + D+ ++ P L +LM C +P+ RP +
Sbjct: 239 VL-------------RF-VMEGGLLDKPDNCP------DMLFELMRMCWQYNPKMRPSFL 278
Query: 326 DVAKQLRQ 333
++ +++
Sbjct: 279 EIISSIKE 286
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 159 EIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF-I 216
E+A + +LH +G I++R +K N+LLDE KL DF LS E H ++ +
Sbjct: 138 ELALGLDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLS---KEAIDHEKKAYSF 190
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAK 274
G ++APE + D +S+G + E+LTG L F+G + +T++ AK
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGS--LPFQGKDRKETMTLILKAK 246
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 49/247 (19%)
Query: 107 SSQMKHKN---ILKLIGCCLETELPTLVFESVKYGTLRGF------------SFASLLIA 151
+S MK N +++L+G + + ++ E + G L+ + A ++
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 152 PRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHV 211
I++A EIA+ +AYL+ V R + A N ++ E+++ K+ DF ++ I E +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-- 193
Query: 212 REEFIKGAYG-----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDD 266
+ KG G +++PE F DV+SFG L E+ T ++G N+
Sbjct: 194 ---YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQV 249
Query: 267 LTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVD 326
L RF + + D+ ++ P L +LM C +P+ RP ++
Sbjct: 250 L-------------RF-VMEGGLLDKPDNCP------DMLFELMRMCWQYNPKMRPSFLE 289
Query: 327 VAKQLRQ 333
+ +++
Sbjct: 290 IISSIKE 296
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 49/247 (19%)
Query: 107 SSQMKHKN---ILKLIGCCLETELPTLVFESVKYGTLRGF------------SFASLLIA 151
+S MK N +++L+G + + ++ E + G L+ + A ++
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 152 PRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHV 211
I++A EIA+ +AYL+ V R + A N ++ E+++ K+ DF ++ I E +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-- 193
Query: 212 REEFIKGAYG-----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDD 266
+ KG G +++PE F DV+SFG L E+ T ++G N+
Sbjct: 194 ---YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQV 249
Query: 267 LTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVD 326
L RF + + D+ ++ P L +LM C +P+ RP ++
Sbjct: 250 L-------------RF-VMEGGLLDKPDNCP------DMLFELMRMCWQYNPKMRPSFLE 289
Query: 327 VAKQLRQ 333
+ +++
Sbjct: 290 IISSIKE 296
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 27/205 (13%)
Query: 71 LFEGTLVDQDRP-----ISVMKFHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLE 124
+ E +D+D+P ++V D++T D+ + + + KHKNI+ L+G C +
Sbjct: 53 MAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112
Query: 125 TELPTLVFESVKYGTLRGFSFA------------------SLLIAPRIKIAMEIANAVAY 166
++ G LR + A + + ++A + Y
Sbjct: 113 DGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPE 226
L + + R + A NVL+ EN K+ DF L+ I + + + + ++APE
Sbjct: 173 LA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 229
Query: 227 YFATSSFNEMCDVYSFGAFLCELLT 251
+ DV+SFG + E+ T
Sbjct: 230 ALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 93/239 (38%), Gaps = 42/239 (17%)
Query: 112 HKNILKLIGCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPR----------- 153
H N++ L+G C + P +V E K+G L + F AP
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 154 -IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR 212
I + ++A + +L R + R + A N+LL E K+ DF L+ I + +VR
Sbjct: 152 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
+ + ++APE + DV+SFG L E+ + + G D+ E+
Sbjct: 209 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EF 262
Query: 273 AKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
++ E R A D + P + Q M C P RP ++ + L
Sbjct: 263 CRRLKEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVA 165
Q+ + I+++IG C E E LV E + G L + + + + I++ +++ +
Sbjct: 425 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 483
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE-FIKGAYGFIA 224
YL + V R + A NVLL + AK+ DF LS ++ E + + + K + A
Sbjct: 484 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 540
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F+ DV+SFG + E + Y +K + G+
Sbjct: 541 PECINYYKFSSKSDVWSFGVLMWEAFS--------------------YGQKPYRGMK-GS 579
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
V + ++ + + LM C + E+RP V +LR Y VV
Sbjct: 580 EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 634
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 28/235 (11%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVA 165
Q+ + I+++IG C E E LV E + G L + + + + I++ +++ +
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 125
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE-FIKGAYGFIA 224
YL + V R + A NVLL + AK+ DF LS ++ E + + K + A
Sbjct: 126 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYA 182
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F+ DV+SFG + E + Y +K + G+
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFS--------------------YGQKPYRGMK-GS 221
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
V + ++ + + LM C + E+RP V +LR Y VV
Sbjct: 222 EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 276
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 131 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 67 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 126
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 127 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 183
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 184 APESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVA 165
Q+ + I+++IG C E E LV E + G L + + + + I++ +++ +
Sbjct: 426 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 484
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE-FIKGAYGFIA 224
YL + V R + A NVLL + AK+ DF LS ++ E + + + K + A
Sbjct: 485 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 541
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGA 284
PE F+ DV+SFG + E + Y +K + G+
Sbjct: 542 PECINYYKFSSKSDVWSFGVLMWEAFS--------------------YGQKPYRGMK-GS 580
Query: 285 IVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
V + ++ + + LM C + E+RP V +LR Y VV
Sbjct: 581 EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 635
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVK----YGTLRGFS-FASLLIAPRIKI 156
+ S ++H NIL+L G + L+ E Y L+ S F A I
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI-- 119
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
E+ANA++Y H + ++ R IK N+LL K+ DF SV P R +
Sbjct: 120 -TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTTL 171
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++ PE +E D++S G E L G
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 91/236 (38%), Gaps = 36/236 (15%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H N++ L G ++ ++ E ++ G+L F + + + + IA +
Sbjct: 89 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGM 148
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG--- 221
YL D V R + A N+L++ N K+ DF LS + E + A G
Sbjct: 149 KYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL---EDDTSDPTYTSALGGKI 202
Query: 222 ---FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIE 278
+ APE F DV+S+G + E V+ Y ++
Sbjct: 203 PIRWTAPEAIQYRKFTSASDVWSYGIVMWE--------------------VMSYGERPYW 242
Query: 279 NNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+ +++ I ++D P + +L QLM C K HRP + L +M
Sbjct: 243 DMTNQDVINAI-EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 128 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 66 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 125
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 126 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 182
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 183 APESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 73 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 132
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 133 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 189
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 190 APESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 128 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 75 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 134
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 135 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 191
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 192 APESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 74 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 133
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 134 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 190
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 191 APESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 72 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 131
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 132 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 188
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 189 APESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 94/225 (41%), Gaps = 32/225 (14%)
Query: 73 EGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVF 132
+G D ++ I KFH E +N I + H NI+KL + + LV
Sbjct: 76 KGRYSDDNKNIE--KFH--------EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVT 125
Query: 133 ESVKYGTLRGFSFASLLIAPRI------KIAMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
E + G L F ++ + I +I + + YLH IV R IK N+L
Sbjct: 126 EFYEGGEL----FEQIINRHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENIL 178
Query: 187 LDENYS---AKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFG 243
L+ S K+ DF LS S + +R+ G +IAPE +NE CDV+S G
Sbjct: 179 LENKNSLLNIKIVDFGLS-SFFSKDYKLRDRL--GTAYYIAPEVLK-KKYNEKCDVWSCG 234
Query: 244 AFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDP 288
+ LL C F G + D + +E K + N + I D
Sbjct: 235 VIMYILL--CGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDE 277
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL--RGFSFA-SLLIAPRIKIAMEI 160
+ S + H NI+KL G L P +V E V G L R A + + ++++ ++I
Sbjct: 74 VFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDI 131
Query: 161 ANAVAYLHVGFDRPIVFRCIKASNVLL---DENYS--AKLHDFSLSVSIPEGETHVREEF 215
A + Y+ + PIV R +++ N+ L DEN AK+ DF LS + H
Sbjct: 132 ALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVSGL 186
Query: 216 IKGAYGFIAPEYFATS--SFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYA 273
+ G + ++APE S+ E D YSF L +LT G G D+ + Y
Sbjct: 187 L-GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT--------GEGPFDEYS---YG 234
Query: 274 KKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQ 333
K N + P ED +L+++ +L C S P+ RP + K+L +
Sbjct: 235 KIKFINMIREEGLRPTIPEDCP-----PRLRNVIEL---CWSGDPKKRPHFSYIVKELSE 286
Query: 334 M 334
+
Sbjct: 287 L 287
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 146 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 43 RAFSAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVE 98
R F +L+K KV+ S + +G + + P+ + D S +
Sbjct: 26 RIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQ 78
Query: 99 YCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-------RGFSFASLLIA 151
++++ + H +I++L+G C + L LV + + G+L RG LL+
Sbjct: 79 AVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLLL- 136
Query: 152 PRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHV 211
++IA + YL + +V R + A NVLL ++ DF ++ +P + +
Sbjct: 137 ---NWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 190
Query: 212 REEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
K ++A E + DV+S+G + EL+T
Sbjct: 191 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 146 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 92/233 (39%), Gaps = 34/233 (14%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGT----LRGFSFASLLIAPRIKIA 157
I SQ + K G L+ ++ E + G+ LR F IA +K
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-- 127
Query: 158 MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
EI + YLH + R IKA+NVLL E KL DF ++ + + T ++
Sbjct: 128 -EILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFV 181
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSI 277
G ++APE S+++ D++S G EL KG + D+ +
Sbjct: 182 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELA--------KGEPPNSDMHPMRVLFLIP 233
Query: 278 ENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQ 330
+NN P D + +S + + CL+K P RP ++ K
Sbjct: 234 KNN------PPTLVGDFT--------KSFKEFIDACLNKDPSFRPTAKELLKH 272
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 158
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 159 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 215
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 216 APESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 38/235 (16%)
Query: 112 HKNILKLIGCCLETELPTLVF-ESVKYGTLRGFSFAS--------------LLIAPRIKI 156
H N++ L+G C + P +V E K+G L + + L + I
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ ++A + +L R + R + A N+LL E K+ DF L+ I + +VR+
Sbjct: 150 SFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
+ ++APE + DV+SFG L E+ + + G D+ E+ ++
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EFCRRL 260
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
E R A D + P + Q M C P RP ++ + L
Sbjct: 261 KEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 40/237 (16%)
Query: 112 HKNILKLIGCCLETELPTLVF-ESVKYGTLRGFSFAS----------------LLIAPRI 154
H N++ L+G C + P +V E K+G L + + L + I
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
+ ++A + +L R + R + A N+LL E K+ DF L+ I + VR+
Sbjct: 152 XYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 215 FIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAK 274
+ ++APE + DV+SFG L E+ + + G D+ E+ +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EFCR 262
Query: 275 KSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
+ E R A D + P + Q M C P RP ++ + L
Sbjct: 263 RLKEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 43 RAFSAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVE 98
R F +L+K KV+ S + +G + + P+ + D S +
Sbjct: 8 RIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQ 60
Query: 99 YCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-------RGFSFASLLIA 151
++++ + H +I++L+G C + L LV + + G+L RG LL+
Sbjct: 61 AVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLLL- 118
Query: 152 PRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHV 211
++IA + YL + +V R + A NVLL ++ DF ++ +P + +
Sbjct: 119 ---NWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172
Query: 212 REEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
K ++A E + DV+S+G + EL+T
Sbjct: 173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I IA + A + YLH + I+ R +K++N+ L E + K+ DF L+ +
Sbjct: 135 IDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191
Query: 214 EFIKGAYGFIAPEYFA---TSSFNEMCDVYSFGAFLCELLTG 252
E G+ ++APE + F+ DVYS+G L EL+TG
Sbjct: 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 128 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY 184
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 26/221 (11%)
Query: 42 IRAFSAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLD-D 96
+R +LK+ KV+ S +++G V + P+++ ++ + +
Sbjct: 32 LRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN 84
Query: 97 VEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF------SFASLLI 150
VE+ ++ +S M H ++++L+G CL + LV + + +G L + + S L+
Sbjct: 85 VEFMDEALIMAS-MDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLL 142
Query: 151 APRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
+ ++IA + YL +R +V R + A NVL+ K+ DF L+ + E
Sbjct: 143 ---LNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 196
Query: 211 VREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ K ++A E F DV+S+G + EL+T
Sbjct: 197 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 89/229 (38%), Gaps = 27/229 (11%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVA 165
Q H NI++LIG C + + +V E V+ G F A L + +++ + A +
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGME 227
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAP 225
YL + + R + A N L+ E K+ DF +S +G + + AP
Sbjct: 228 YLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAP 284
Query: 226 EYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAI 285
E ++ DV+SFG L E + L Y S + R
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFS---------------LGASPYPNLSNQQTR---- 325
Query: 286 VDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
++ P E ++ +LM +C + P RP + ++L+ +
Sbjct: 326 --EFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S ++ H+NI++ IG L++ ++ E + G L+ F
Sbjct: 74 SEQDELDFLMEALIIS-KLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 132
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 189
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 190 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 248
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 249 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 288
Query: 320 HRP 322
RP
Sbjct: 289 DRP 291
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A EI + LH IV+R +K N+LLD++ ++ D L+V +PEG+T I
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT------I 342
Query: 217 K---GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
K G G++APE + D ++ G L E++ G
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 22/192 (11%)
Query: 96 DVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI- 154
D E + Q+ H NI+KL + LV E G L F ++ R
Sbjct: 93 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFS 148
Query: 155 -----KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPE 206
+I ++ + + Y+H IV R +K N+LL+ ++ + ++ DF LS E
Sbjct: 149 EVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-E 204
Query: 207 GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDD 266
++++ I AY +IAPE +++E CDV+S G L LL+GC F G D
Sbjct: 205 ASKKMKDK-IGTAY-YIAPEVLH-GTYDEKCDVWSTGVILYILLSGCP--PFNGANEYDI 259
Query: 267 LTVLEYAKKSIE 278
L +E K + E
Sbjct: 260 LKKVEKGKYTFE 271
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 26/216 (12%)
Query: 130 LVFESVKYGTLRGF--SFASLLIAPRIKI-AMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
LV E + G LR F + L A R+ + + +I + YL R V R + A N+L
Sbjct: 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 159
Query: 187 LDENYSAKLHDFSLSVSIP-EGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAF 245
++ K+ DF L+ +P + + +V E + + APE + + F+ DV+SFG
Sbjct: 160 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 219
Query: 246 LCELLTGCN-----VLEF-KGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGK 299
L EL T C+ EF + G + D+ L + +E P
Sbjct: 220 LYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG-------------QRLPAP 266
Query: 300 EEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ +LM C + SP+ RP + QL ++
Sbjct: 267 PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 302
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 22/192 (11%)
Query: 96 DVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI- 154
D E + Q+ H NI+KL + LV E G L F ++ R
Sbjct: 69 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFS 124
Query: 155 -----KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPE 206
+I ++ + + Y+H IV R +K N+LL+ ++ + ++ DF LS E
Sbjct: 125 EVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-E 180
Query: 207 GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDD 266
++++ I AY +IAPE +++E CDV+S G L LL+GC F G D
Sbjct: 181 ASKKMKDK-IGTAY-YIAPEVLH-GTYDEKCDVWSTGVILYILLSGCP--PFNGANEYDI 235
Query: 267 LTVLEYAKKSIE 278
L +E K + E
Sbjct: 236 LKKVEKGKYTFE 247
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 51/248 (20%)
Query: 107 SSQMKHKN---ILKLIGCCLETELPTLVFESVKYGTLRGFSFASL--------LIAP--- 152
+S MK N +++L+G + + ++ E + G L+ + SL ++AP
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY-LRSLRPEMENNPVLAPPSL 124
Query: 153 --RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
I++A EIA+ +AYL+ V R + A N + E+++ K+ DF ++ I E +
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY- 180
Query: 211 VREEFIKGAYG-----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
+ KG G +++PE F DV+SFG L E+ T ++G N+
Sbjct: 181 ----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLSNEQ 235
Query: 266 DLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMV 325
L RF + + D+ ++ P L +LM C +P+ RP +
Sbjct: 236 VL-------------RF-VMEGGLLDKPDNCP------DMLLELMRMCWQYNPKMRPSFL 275
Query: 326 DVAKQLRQ 333
++ +++
Sbjct: 276 EIISSIKE 283
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 22/192 (11%)
Query: 96 DVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI- 154
D E + Q+ H NI+KL + LV E G L F ++ R
Sbjct: 92 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFS 147
Query: 155 -----KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPE 206
+I ++ + + Y+H IV R +K N+LL+ ++ + ++ DF LS E
Sbjct: 148 EVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-E 203
Query: 207 GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDD 266
++++ I AY +IAPE +++E CDV+S G L LL+GC F G D
Sbjct: 204 ASKKMKDK-IGTAY-YIAPEVLH-GTYDEKCDVWSTGVILYILLSGCP--PFNGANEYDI 258
Query: 267 LTVLEYAKKSIE 278
L +E K + E
Sbjct: 259 LKKVEKGKYTFE 270
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 110 MKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAV 164
++H NI+K G C L + E + YG+LR + IK+ +I +
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR-EEFIKGAYGFI 223
YL G R + R + N+L++ K+ DF L+ +P+ + + +E + +
Sbjct: 131 EYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
APE S F+ DV+SFG L EL T
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA 157
E FN +V +H N++++ L E ++ E ++ G L L +I
Sbjct: 87 ELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATV 146
Query: 158 ME-IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
E + A+AYLH + ++ R IK+ ++LL + KL DF I + + R+ +
Sbjct: 147 CEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-DVPKRKXLV 202
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE + S + D++S G + E++ G
Sbjct: 203 GTPY-WMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A EI + LH IV+R +K N+LLD++ ++ D L+V +PEG+T I
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT------I 342
Query: 217 K---GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
K G G++APE + D ++ G L E++ G
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 89/229 (38%), Gaps = 27/229 (11%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVA 165
Q H NI++LIG C + + +V E V+ G F A L + +++ + A +
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGME 227
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAP 225
YL + + R + A N L+ E K+ DF +S +G + + AP
Sbjct: 228 YLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAP 284
Query: 226 EYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAI 285
E ++ DV+SFG L E + L Y S + R
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFS---------------LGASPYPNLSNQQTR---- 325
Query: 286 VDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
++ P E ++ +LM +C + P RP + ++L+ +
Sbjct: 326 --EFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S ++ H+NI++ IG L++ ++ E + G L+ F
Sbjct: 88 SEQDELDFLMEALIIS-KLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 146
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 262
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 263 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 302
Query: 320 HRP 322
RP
Sbjct: 303 DRP 305
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 22/192 (11%)
Query: 96 DVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI- 154
D E + Q+ H NI+KL + LV E G L F ++ R
Sbjct: 75 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFS 130
Query: 155 -----KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPE 206
+I ++ + + Y+H IV R +K N+LL+ ++ + ++ DF LS E
Sbjct: 131 EVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-E 186
Query: 207 GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDD 266
++++ I AY +IAPE +++E CDV+S G L LL+GC F G D
Sbjct: 187 ASKKMKDK-IGTAY-YIAPEVLH-GTYDEKCDVWSTGVILYILLSGCP--PFNGANEYDI 241
Query: 267 LTVLEYAKKSIE 278
L +E K + E
Sbjct: 242 LKKVEKGKYTFE 253
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLD-DVEYCFNNIVFSSQMKHKNI 115
KV+ S +++G V + P+++ ++ + +VE+ ++ +S M H ++
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS-MDHPHL 79
Query: 116 LKLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHV 169
++L+G CL + LV + + +G L + + S L+ + ++IA + YL
Sbjct: 80 VRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLL---LNWCVQIAKGMMYLE- 134
Query: 170 GFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFA 229
+R +V R + A NVL+ K+ DF L+ + E + K ++A E
Sbjct: 135 --ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 230 TSSFNEMCDVYSFGAFLCELLT 251
F DV+S+G + EL+T
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMT 214
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI-KI 156
E FN +V H N++ + L + +V E ++ G L + + +I +
Sbjct: 87 ELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATV 146
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ + A++YLH ++ ++ R IK+ ++LL + KL DF + + E R+ +
Sbjct: 147 CLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-EVPKRKXLV 202
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE + + D++S G + E++ G
Sbjct: 203 GTPY-WMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S + H+NI++ IG L++ ++ E + G L+ F
Sbjct: 100 SEQDELDFLMEALIIS-KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 158
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 159 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 215
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 216 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 274
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 275 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 314
Query: 320 HRP 322
RP
Sbjct: 315 DRP 317
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 152 PR-IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
PR I +I + + +LH R I++R +K NVLLD++ + ++ D L+V + G+T
Sbjct: 289 PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 211 VREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGN 261
+ G GF+APE ++ D ++ G L E++ +G
Sbjct: 346 TKG--YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 91/234 (38%), Gaps = 32/234 (13%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVF-ESVKYGTLRGF---SFASLLIAPRIKIAMEIANA 163
Q +H NI++L G + +P ++ E ++ G L F + + + + IA+
Sbjct: 72 GQFEHPNIIRLEGVVTNS-MPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 130
Query: 164 VAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA---Y 220
+ YL + V R + A N+L++ N K+ DF LS + E + E G
Sbjct: 131 MRYLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENN 280
+ APE A F D +S+G + E+++ + N D + +E
Sbjct: 188 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMS-FGERPYWDMSNQDVINAIE--------- 237
Query: 281 RFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+D P + SL QLM C K RP V L +M
Sbjct: 238 -----------QDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 22/221 (9%)
Query: 76 LVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESV 135
L +R I ++K +T + + + Q+ H NI+KL + LV E
Sbjct: 44 LTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVY 103
Query: 136 KYGTLRGFSFASLLIAPRIK------IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDE 189
+ G L F +++ + I ++ + YLH IV R +K N+LL+
Sbjct: 104 RGGEL----FDEIILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLES 156
Query: 190 NYS---AKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFL 246
K+ DF LS G +E + AY +IAPE ++E CDV+S G L
Sbjct: 157 KSRDALIKIVDFGLSAHFEVGGKM--KERLGTAY-YIAPEVL-RKKYDEKCDVWSCGVIL 212
Query: 247 CELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVD 287
LL C F G + + L +E K S + + + D
Sbjct: 213 YILL--CGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD 251
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 152 PR-IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
PR I +I + + +LH R I++R +K NVLLD++ + ++ D L+V + G+T
Sbjct: 289 PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 211 VREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGN 261
+ G GF+APE ++ D ++ G L E++ +G
Sbjct: 346 TKG--YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 21/165 (12%)
Query: 110 MKHKNILKLIGC-----CLETELPTLVFESVKYGTLRGFSFASLLIAPRI-KIAMEIANA 163
MKH+NIL+ IG ++ +L L+ + G+L F A+++ + IA +A
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDL-WLITAFHEKGSLSDFLKANVVSWNELCHIAETMARG 133
Query: 164 VAYLHV-------GFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+AYLH G I R IK+ NVLL N +A + DF L++ G++
Sbjct: 134 LAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ 193
Query: 217 KGAYGFIAPEY------FATSSFNEMCDVYSFGAFLCELLTGCNV 255
G ++APE F +F + D+Y+ G L EL + C
Sbjct: 194 VGTRRYMAPEVLEGAINFQRDAFLRI-DMYAMGLVLWELASRCTA 237
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 152 PR-IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
PR I +I + + +LH R I++R +K NVLLD++ + ++ D L+V + G+T
Sbjct: 289 PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 211 VREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGN 261
+ G GF+APE ++ D ++ G L E++ +G
Sbjct: 346 TKG--YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 104/268 (38%), Gaps = 39/268 (14%)
Query: 80 DRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGT 139
D I V+K + D E Q+ + I++LIG C + E LV E G
Sbjct: 39 DVAIKVLK--QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGP 95
Query: 140 LRGFSFASLLIAPRIKIAMEIANAVAYLH---VGF----DRPIVFRCIKASNVLLDENYS 192
L F L+ R +I ++N LH +G ++ V R + A NVLL +
Sbjct: 96 LHKF-----LVGKREEIP--VSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY 148
Query: 193 AKLHDFSLSVSIPEGETHVREEFI-KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
AK+ DF LS ++ +++ K + APE F+ DV+S+G + E L+
Sbjct: 149 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
Query: 252 GCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMY 311
Y +K + + G V ++ E L LM
Sbjct: 209 --------------------YGQKPYKKMK-GPEVMAFIEQGKRMECPPECPPELYALMS 247
Query: 312 KCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
C E RP + V +++R Y S+
Sbjct: 248 DCWIYKWEDRPDFLTVEQRMRACYYSLA 275
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S + H+NI++ IG L++ ++ E + G L+ F
Sbjct: 80 SEQDELDFLMEALIIS-KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 138
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 139 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 195
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 196 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 254
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 255 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 294
Query: 320 HRP 322
RP
Sbjct: 295 DRP 297
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S + H+NI++ IG L++ ++ E + G L+ F
Sbjct: 74 SEQDELDFLMEALIIS-KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 132
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 189
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 190 MAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 248
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 249 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 288
Query: 320 HRP 322
RP
Sbjct: 289 DRP 291
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A EI + +LH + IV+R +K N+LLD++ K+ DF + G+ E
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE--F 179
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G +IAPE +N D +SFG L E+L G
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 215
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGE-THVREEFI 216
EI+ A+ +LH + I++R +K N++L+ KL DF L SI +G TH
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT----F 181
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGC 253
G ++APE S N D +S GA + ++LTG
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 152 PR-IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
PR I +I + + +LH R I++R +K NVLLD++ + ++ D L+V + G+T
Sbjct: 289 PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 211 VREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGN 261
+ G GF+APE ++ D ++ G L E++ +G
Sbjct: 346 TKG--YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S + H+NI++ IG L++ ++ E + G L+ F
Sbjct: 74 SEQDELDFLMEALIIS-KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 132
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 189
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 190 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 248
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 249 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 288
Query: 320 HRP 322
RP
Sbjct: 289 DRP 291
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 27/175 (15%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
I EI + YLH +R I R IKA+NVLL E KL DF ++ + +T ++
Sbjct: 121 ILREILKGLDYLHS--ERKI-HRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNX 175
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKK 275
G ++APE S+++ D++S G EL KG + DL +
Sbjct: 176 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELA--------KGEPPNSDLHPMRVLFL 227
Query: 276 SIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQ 330
+N+ P + +S P KE + CL+K P RP ++ K
Sbjct: 228 IPKNS------PPTLEGQHSKPFKE--------FVEACLNKDPRFRPTAKELLKH 268
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S + H+NI++ IG L++ ++ E + G L+ F
Sbjct: 90 SEQDELDFLMEALIIS-KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 148
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 149 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 205
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 206 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 264
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 265 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 304
Query: 320 HRP 322
RP
Sbjct: 305 DRP 307
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Query: 130 LVFESVKYGTLRGF--SFASLLIAPRIKI-AMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
LV E + G LR F + L A R+ + + +I + YL R V R + A N+L
Sbjct: 91 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 147
Query: 187 LDENYSAKLHDFSLSVSIP-EGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAF 245
++ K+ DF L+ +P + + +V E + + APE + + F+ DV+SFG
Sbjct: 148 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 207
Query: 246 LCELLTGCN-----VLEF-KGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGK 299
L EL T C+ EF + G + D+ L + +E + P
Sbjct: 208 LYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQ-------------RLPAP 254
Query: 300 EEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ +LM C + SP+ RP + QL ++
Sbjct: 255 PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 290
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIK-I 156
E FN +V +H+N++++ L + +V E ++ G L + + +I +
Sbjct: 66 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV 125
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ + A++ LH + ++ R IK+ ++LL + KL DF + + E R+ +
Sbjct: 126 CLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLV 181
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE + + D++S G + E++ G
Sbjct: 182 GTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 6/156 (3%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIK-I 156
E N I+ + K+ NI+ + L + +V E + G+L + + +I +
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 121
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
E A+ +LH ++ R IK+ N+LL + S KL DF I E R E +
Sbjct: 122 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSEMV 177
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE ++ D++S G E++ G
Sbjct: 178 GTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIK-I 156
E FN +V +H+N++++ L + +V E ++ G L + + +I +
Sbjct: 73 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV 132
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ + A++ LH + ++ R IK+ ++LL + KL DF + + E R+ +
Sbjct: 133 CLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLV 188
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE + + D++S G + E++ G
Sbjct: 189 GTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIK-I 156
E FN +V +H+N++++ L + +V E ++ G L + + +I +
Sbjct: 116 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV 175
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ + A++ LH + ++ R IK+ ++LL + KL DF + + E R+ +
Sbjct: 176 CLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLV 231
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE + + D++S G + E++ G
Sbjct: 232 GTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 110/265 (41%), Gaps = 23/265 (8%)
Query: 78 DQDRPISVMKFHDNSTLDDVE-YCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVK 136
D R +++ KF ++ V+ I Q++H+N++ L+ C + + LVFE V
Sbjct: 48 DTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVD 107
Query: 137 YGTLRGFSFASLLIAPRI--KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAK 194
+ L + ++ K +I N + + H I+ R IK N+L+ ++ K
Sbjct: 108 HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVK 164
Query: 195 LHDFSLSVSI-PEGETHVREEFIKGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLTG 252
L DF + ++ GE + E + APE + + DV++ G + E+ G
Sbjct: 165 LCDFGFARTLAAPGEVYDDE---VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
Query: 253 CNVLEFKGNGNDDDL---------TVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKL 303
+ F G+ + D L + + + +N F + P E + KL
Sbjct: 222 EPL--FPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKL 279
Query: 304 -QSLGQLMYKCLSKSPEHRPLMVDV 327
+ + L KCL P+ RP ++
Sbjct: 280 SEVVIDLAKKCLHIDPDKRPFCAEL 304
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIK 217
EI+ A+ +LH + I++R +K N++L+ KL DF L SI +G V F
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFC- 182
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGC 253
G ++APE S N D +S GA + ++LTG
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIK-I 156
E FN +V +H+N++++ L + +V E ++ G L + + +I +
Sbjct: 62 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV 121
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ + A++ LH + ++ R IK+ ++LL + KL DF + + E R+ +
Sbjct: 122 CLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLV 177
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE + + D++S G + E++ G
Sbjct: 178 GTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S + H+NI++ IG L++ ++ E + G L+ F
Sbjct: 88 SEQDELDFLMEALIIS-KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 146
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 262
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 263 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 302
Query: 320 HRP 322
RP
Sbjct: 303 DRP 305
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 22/221 (9%)
Query: 76 LVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESV 135
L +R I ++K +T + + + Q+ H NI+KL + LV E
Sbjct: 27 LTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVY 86
Query: 136 KYGTLRGFSFASLLIAPRIK------IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLD- 188
+ G L F +++ + I ++ + YLH IV R +K N+LL+
Sbjct: 87 RGGEL----FDEIILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLES 139
Query: 189 --ENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFL 246
+ K+ DF LS G +E + AY +IAPE ++E CDV+S G L
Sbjct: 140 KSRDALIKIVDFGLSAHFEVGGK--MKERLGTAY-YIAPEVL-RKKYDEKCDVWSCGVIL 195
Query: 247 CELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVD 287
LL C F G + + L +E K S + + + D
Sbjct: 196 YILL--CGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD 234
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIK-I 156
E FN +V +H+N++++ L + +V E ++ G L + + +I +
Sbjct: 71 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV 130
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ + A++ LH + ++ R IK+ ++LL + KL DF + + E R+ +
Sbjct: 131 CLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLV 186
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE + + D++S G + E++ G
Sbjct: 187 GTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
I EI + YLH + R IKA+NVLL E+ KL DF ++ + +T ++
Sbjct: 124 ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNX 178
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE S+++ D++S G EL G
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 215
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 92/238 (38%), Gaps = 41/238 (17%)
Query: 112 HKNILKLIGCCLETELPTLVF-ESVKYGTLRGFSFAS-----------------LLIAPR 153
H N++ L+G C + P +V E K+G L + + L +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I + ++A + +L R + R + A N+LL E K+ DF L+ I + VR+
Sbjct: 151 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 214 EFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYA 273
+ ++APE + DV+SFG L E+ + + G D+ E+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EFC 261
Query: 274 KKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
++ E R A D + P + Q M C P RP ++ + L
Sbjct: 262 RRLKEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 104/268 (38%), Gaps = 39/268 (14%)
Query: 80 DRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGT 139
D I V+K + D E Q+ + I++LIG C + E LV E G
Sbjct: 365 DVAIKVLK--QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGP 421
Query: 140 LRGFSFASLLIAPRIKIAMEIANAVAYLH---VGF----DRPIVFRCIKASNVLLDENYS 192
L F L+ R +I ++N LH +G ++ V R + A NVLL +
Sbjct: 422 LHKF-----LVGKREEIP--VSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHY 474
Query: 193 AKLHDFSLSVSIPEGETHVREEFI-KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
AK+ DF LS ++ +++ K + APE F+ DV+S+G + E L+
Sbjct: 475 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
Query: 252 GCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMY 311
Y +K + + G V ++ E L LM
Sbjct: 535 --------------------YGQKPYKKMK-GPEVMAFIEQGKRMECPPECPPELYALMS 573
Query: 312 KCLSKSPEHRPLMVDVAKQLRQMYLSVV 339
C E RP + V +++R Y S+
Sbjct: 574 DCWIYKWEDRPDFLTVEQRMRACYYSLA 601
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 37/241 (15%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL--RGFSFA-SLLIAPRIKIAMEI 160
+ S + H NI+KL G L P +V E V G L R A + + ++++ ++I
Sbjct: 74 VFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDI 131
Query: 161 ANAVAYLHVGFDRPIVFRCIKASNVLL---DENYS--AKLHDFSLSVSIPEGETHVREEF 215
A + Y+ + PIV R +++ N+ L DEN AK+ DF S + H
Sbjct: 132 ALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSVSGL 186
Query: 216 IKGAYGFIAPEYFATS--SFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYA 273
+ G + ++APE S+ E D YSF L +LT G G D+ + Y
Sbjct: 187 L-GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT--------GEGPFDEYS---YG 234
Query: 274 KKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQ 333
K N + P ED +L+++ +L C S P+ RP + K+L +
Sbjct: 235 KIKFINMIREEGLRPTIPEDCP-----PRLRNVIEL---CWSGDPKKRPHFSYIVKELSE 286
Query: 334 M 334
+
Sbjct: 287 L 287
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFA------------------SLL 149
+ ++H++I+K G C + + +VFE +K+G L F A L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 150 IAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGET 209
++ + IA +IA+ + YL + V R + N L+ N K+ DF +S + +
Sbjct: 132 LSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
Query: 210 HVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ ++ PE F DV+SFG L E+ T
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 117/301 (38%), Gaps = 45/301 (14%)
Query: 55 NNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMK-----FHDNSTLDDVEYCFNNIVFSSQ 109
NN K + + ++ E T + +V+K + D+ E + + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 110 M-KHKNILKLIGCCLETELPTLVFESVKYGTL--------------RGFSFASLLIAPR- 153
+ +H+NI+ L+G C ++ E YG L F+ A+ ++ R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 154 -IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR 212
+ + ++A +A+L + + R + A NVLL + AK+ DF L+ I ++
Sbjct: 166 LLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
+ + ++APE + DV+S+G L E+ + L + Y
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------------LGLNPY 267
Query: 273 AKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLR 332
+ + + + D +F K ++ +M C + P HRP + L+
Sbjct: 268 PGILVNSKFYKLVKDGYQMAQPAFAPK-----NIYSIMQACWALEPTHRPTFQQICSFLQ 322
Query: 333 Q 333
+
Sbjct: 323 E 323
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
I EI + YLH + R IKA+NVLL E+ KL DF ++ + +T ++
Sbjct: 109 ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNX 163
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE S+++ D++S G EL G
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 22/225 (9%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDD--VEYCFNN 103
++ D + NY L K I ++ + + ++V K D + L+ ++ F
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFRE 63
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
+ + H NI+KL + LV E G + F L+ R+K
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAKF 119
Query: 158 MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
+I +AV Y H F IV R +KA N+LLD + + K+ DF S G + +
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---KLDAFC 173
Query: 218 GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTGCNVLEFKGN 261
GA + APE F ++ DV+S G L L++G L F G
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS--LPFDGQ 216
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 105/237 (44%), Gaps = 48/237 (20%)
Query: 114 NILKLIGCCLETELPTLVFESVKYGTLRGF------------SFASLLIAPRIKIAMEIA 161
++++L+G + + +V E + +G L+ + + I++A EIA
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ +AYL+ + V R + A N ++ +++ K+ DF ++ I E + + KG G
Sbjct: 140 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-----YRKGGKG 191
Query: 222 -----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
++APE F D++SFG L E +T ++G N+ VL++
Sbjct: 192 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VLKF---- 243
Query: 277 IENNRFGAIVDPIF-DEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLR 332
++D + D+ ++ P + + LM C +P+ RP +++ L+
Sbjct: 244 --------VMDGGYLDQPDNCP------ERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIK-I 156
E FN +V +H+N++++ L + +V E ++ G L + + +I +
Sbjct: 193 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV 252
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ + A++ LH + ++ R IK+ ++LL + KL DF + E R+ +
Sbjct: 253 CLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXLV 308
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE + + D++S G + E++ G
Sbjct: 309 GTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S + H+NI++ IG L++ ++ E + G L+ F
Sbjct: 88 SEQDELDFLMEALIIS-KFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP 146
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 262
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 263 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 302
Query: 320 HRP 322
RP
Sbjct: 303 DRP 305
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 26/216 (12%)
Query: 130 LVFESVKYGTLRGF--SFASLLIAPRIKI-AMEIANAVAYLHVGFDRPIVFRCIKASNVL 186
LV E + G LR F + L A R+ + + +I + YL R V R + A N+L
Sbjct: 87 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 143
Query: 187 LDENYSAKLHDFSLSVSIP-EGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAF 245
++ K+ DF L+ +P + + V E + + APE + + F+ DV+SFG
Sbjct: 144 VESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 203
Query: 246 LCELLTGCN-----VLEF-KGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGK 299
L EL T C+ EF + G + D+ L + +E P
Sbjct: 204 LYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEG-------------QRLPAP 250
Query: 300 EEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ +LM C + SP+ RP + QL ++
Sbjct: 251 PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 286
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S + H+NI++ IG L++ ++ E + G L+ F
Sbjct: 73 SEQDELDFLMEALIIS-KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 131
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 247
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 248 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 287
Query: 320 HRP 322
RP
Sbjct: 288 DRP 290
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S + H+NI++ IG L++ ++ E + G L+ F
Sbjct: 114 SEQDELDFLMEALIIS-KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 172
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 173 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 229
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 288
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 289 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 328
Query: 320 HRP 322
RP
Sbjct: 329 DRP 331
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S + H+NI++ IG L++ ++ E + G L+ F
Sbjct: 73 SEQDELDFLMEALIIS-KFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRP 131
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 247
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 248 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 287
Query: 320 HRP 322
RP
Sbjct: 288 DRP 290
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S + H+NI++ IG L++ ++ E + G L+ F
Sbjct: 65 SEQDELDFLMEALIIS-KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 123
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 124 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 180
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 181 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 239
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 240 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 279
Query: 320 HRP 322
RP
Sbjct: 280 DRP 282
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI A+ +LH I++R IK N+LLD N L DF LS ET +F G
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC-G 222
Query: 219 AYGFIAPEYF--ATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGN 263
++AP+ S ++ D +S G + ELLTG + G N
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN 269
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 99/253 (39%), Gaps = 50/253 (19%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF------------------------ 143
++ + NI+KL+G C + L+FE + YG L F
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 144 --SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS 201
L A ++ IA ++A +AYL +R V R + N L+ EN K+ DF LS
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLS 221
Query: 202 VSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGN 261
+I + + + ++ PE + + DV+++G L E+ + + + G
Sbjct: 222 RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY-GLQPYYGM 280
Query: 262 GNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHR 321
+++ V+ Y + + N E L LM C SK P R
Sbjct: 281 AHEE---VIYYVR-----------------DGNILACPENCPLELYNLMRLCWSKLPADR 320
Query: 322 PLMVDVAKQLRQM 334
P + + L++M
Sbjct: 321 PSFCSIHRILQRM 333
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
I EI + YLH + R IKA+NVLL E+ KL DF ++ + +T ++
Sbjct: 109 ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNT 163
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE S+++ D++S G EL G
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 92 STLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-------- 143
S D++++ ++ S + H+NI++ IG L++ ++ E + G L+ F
Sbjct: 91 SEQDELDFLMEALIIS-KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRP 149
Query: 144 -SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFS 199
+SL + + +A +IA YL + + R I A N LL AK+ DF
Sbjct: 150 SQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 206
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFK 259
++ I + + ++ PE F F D +SFG L E+ + + +
Sbjct: 207 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 265
Query: 260 GNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPE 319
N + VLE+ G +DP + PG + ++M +C PE
Sbjct: 266 SKSNQE---VLEFVTS-------GGRMDP----PKNCPG------PVYRIMTQCWQHQPE 305
Query: 320 HRP 322
RP
Sbjct: 306 DRP 308
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 75/182 (41%), Gaps = 23/182 (12%)
Query: 95 DDVEYCFNNIVFSSQMKHKNILKLIGCCLET-ELPTLVFESVKYGTL-------RGFSFA 146
DDVE S ++ L + CC +T + V E V G L R F A
Sbjct: 65 DDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA 124
Query: 147 SLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIP 205
A EI +A+ +LH D+ I++R +K NVLLD KL DF + I
Sbjct: 125 RARF-----YAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176
Query: 206 EGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
G T G +IAPE + D ++ G L E+L G E + N+D
Sbjct: 177 NGVTTAT---FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE---NED 230
Query: 266 DL 267
DL
Sbjct: 231 DL 232
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 48/237 (20%)
Query: 114 NILKLIGCCLETELPTLVFESVKYGTLRGF------------SFASLLIAPRIKIAMEIA 161
++++L+G + + +V E + +G L+ + + I++A EIA
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ +AYL+ + V R + A N ++ +++ K+ DF ++ I E + KG G
Sbjct: 138 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR-----KGGKG 189
Query: 222 -----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
++APE F D++SFG L E +T ++G N+ VL++
Sbjct: 190 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VLKF---- 241
Query: 277 IENNRFGAIVDPIF-DEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLR 332
++D + D+ ++ P + + LM C +P+ RP +++ L+
Sbjct: 242 --------VMDGGYLDQPDNCP------ERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
I EI + YLH + R IKA+NVLL E+ KL DF ++ + +T ++
Sbjct: 129 ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNT 183
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE S+++ D++S G EL G
Sbjct: 184 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 220
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 24/226 (10%)
Query: 46 SAKDLKKATNNYDLHKVIQSD--TSYRLFEGTLVDQDRPISVM-KFHDNSTLDDVEYCFN 102
++ D + NY L K I +L L ++ + ++ K NS+ ++ F
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSS--SLQKLFR 62
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA----- 157
+ + H NI+KL + LV E G + F L+ R+K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAK 118
Query: 158 -MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+I +AV Y H F IV R +KA N+LLD + + K+ DF S G +EF
Sbjct: 119 FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFC 173
Query: 217 KGAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTGCNVLEFKGN 261
G+ + APE F ++ DV+S G L L++G L F G
Sbjct: 174 -GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS--LPFDGQ 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 23/190 (12%)
Query: 142 GFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS 201
GF + + I + ++A + +L R + R + A N+LL EN K+ DF L+
Sbjct: 190 GFYKEPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLA 246
Query: 202 VSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGN 261
I + +VR+ + ++APE ++ DV+S+G L E+ + + G
Sbjct: 247 RDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS-LGGSPYPGV 305
Query: 262 GNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHR 321
D+D + + E R A E + Q+M C + P+ R
Sbjct: 306 QMDED-----FCSRLREGMRMRA--------------PEYSTPEIYQIMLDCWHRDPKER 346
Query: 322 PLMVDVAKQL 331
P ++ ++L
Sbjct: 347 PRFAELVEKL 356
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 102/236 (43%), Gaps = 46/236 (19%)
Query: 114 NILKLIGCCLETELPTLVFESVKYGTLRGF------------SFASLLIAPRIKIAMEIA 161
++++L+G + + +V E + +G L+ + + I++A EIA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ +AYL+ + V R + A N ++ +++ K+ DF ++ I E + + KG G
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-----YRKGGKG 192
Query: 222 -----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
++APE F D++SFG L E +T ++G N+ L K
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL-------KF 244
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLR 332
+ + + D+ ++ P + + LM C +P+ RP +++ L+
Sbjct: 245 VMDGGY-------LDQPDNCP------ERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 22/225 (9%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLD--DVEYCFNN 103
S D + NY L K I ++ + R +++ K D + L+ ++ F
Sbjct: 6 SCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAI-KIIDKTQLNPTSLQKLFRE 64
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
+ + H NI+KL + L+ E G + F L+ R+K
Sbjct: 65 VRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV----FDYLVAHGRMKEKEARSKF 120
Query: 158 MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
+I +AV Y H + IV R +KA N+LLD + + K+ DF S G + +
Sbjct: 121 RQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---KLDAFC 174
Query: 218 GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTGCNVLEFKGN 261
GA + APE F ++ DV+S G L L++G L F G
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS--LPFDGQ 217
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 101/236 (42%), Gaps = 46/236 (19%)
Query: 114 NILKLIGCCLETELPTLVFESVKYGTLRGF------------SFASLLIAPRIKIAMEIA 161
++++L+G + + +V E + +G L+ + + I++A EIA
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ +AYL+ + V R + A N ++ +++ K+ DF ++ I E + + KG G
Sbjct: 142 DGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY-----YRKGGKG 193
Query: 222 -----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
++APE F D++SFG L E +T ++G N+ L K
Sbjct: 194 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL-------KF 245
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLR 332
+ + + D+ ++ P + + LM C +P RP +++ L+
Sbjct: 246 VMDGGY-------LDQPDNCP------ERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 48/237 (20%)
Query: 114 NILKLIGCCLETELPTLVFESVKYGTLRGF------------SFASLLIAPRIKIAMEIA 161
++++L+G + + +V E + +G L+ + + I++A EIA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ +AYL+ + V R + A N ++ +++ K+ DF ++ I E + KG G
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR-----KGGKG 192
Query: 222 -----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
++APE F D++SFG L E +T ++G N+ VL++
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VLKF---- 244
Query: 277 IENNRFGAIVDPIF-DEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLR 332
++D + D+ ++ P + + LM C +P+ RP +++ L+
Sbjct: 245 --------VMDGGYLDQPDNCP------ERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 101/236 (42%), Gaps = 46/236 (19%)
Query: 114 NILKLIGCCLETELPTLVFESVKYGTLRGF------------SFASLLIAPRIKIAMEIA 161
++++L+G + + +V E + +G L+ + + I++A EIA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ +AYL+ + V R + A N ++ +++ K+ DF ++ I E + + KG G
Sbjct: 141 DGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY-----YRKGGKG 192
Query: 222 -----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
++APE F D++SFG L E +T ++G N+ L K
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL-------KF 244
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLR 332
+ + + D+ ++ P + + LM C +P RP +++ L+
Sbjct: 245 VMDGGY-------LDQPDNCP------ERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 108 SQMKHKNILKLIGCCLETELPT-LVFESVKYGTL----RGFSFASLLIAPRIKIAMEIAN 162
+Q++H N+++L+G +E + +V E + G+L R + L +K ++++
Sbjct: 60 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 119
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGF 222
A+ YL V R + A NVL+ E+ AK+ DF L+ E ++ K +
Sbjct: 120 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKW 171
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCEL 249
APE ++F+ DV+SFG L E+
Sbjct: 172 TAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 31/176 (17%)
Query: 105 VFSSQ-MKHKNILKLI-----GCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI-KIA 157
+FS+ MKH+N+L+ I G LE EL L+ G+L + +++ + +A
Sbjct: 60 IFSTPGMKHENLLQFIAAEKRGSNLEVEL-WLITAFHDKGSLTDYLKGNIITWNELCHVA 118
Query: 158 MEIANAVAYLHV--------GFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI----P 205
++ ++YLH G I R K+ NVLL + +A L DF L+V P
Sbjct: 119 ETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKP 178
Query: 206 EGETHVREEFIKGAYGFIAPEY------FATSSFNEMCDVYSFGAFLCELLTGCNV 255
G+TH + G ++APE F +F + D+Y+ G L EL++ C
Sbjct: 179 PGDTHGQ----VGTRRYMAPEVLEGAINFQRDAFLRI-DMYAMGLVLWELVSRCKA 229
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 116/301 (38%), Gaps = 45/301 (14%)
Query: 55 NNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMK-----FHDNSTLDDVEYCFNNIVFSSQ 109
NN K + + ++ E T + +V+K + D+ E + + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 110 M-KHKNILKLIGCCLETELPTLVFESVKYGTL--------------RGFSFASLLIAPR- 153
+ +H+NI+ L+G C ++ E YG L F+ A+ + R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 154 -IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR 212
+ + ++A +A+L + + R + A NVLL + AK+ DF L+ I ++
Sbjct: 166 LLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
+ + ++APE + DV+S+G L E+ + L + Y
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------------LGLNPY 267
Query: 273 AKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLR 332
+ + + + D +F K ++ +M C + P HRP + L+
Sbjct: 268 PGILVNSKFYKLVKDGYQMAQPAFAPK-----NIYSIMQACWALEPTHRPTFQQICSFLQ 322
Query: 333 Q 333
+
Sbjct: 323 E 323
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 30/233 (12%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q +H NI++L G + ++ E ++ G L F + + + + IA+ +
Sbjct: 70 GQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGM 129
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE---THVREEFIKGAYG 221
YL + V R + A N+L++ N K+ DF LS + E T+ K
Sbjct: 130 RYLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR 186
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ APE A F D +S+G + E+++ + N D + +E
Sbjct: 187 WTAPEAIAFRKFTSASDAWSYGIVMWEVMS-FGERPYWDMSNQDVINAIE---------- 235
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+D P + SL QLM C K RP V L +M
Sbjct: 236 ----------QDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 99/236 (41%), Gaps = 46/236 (19%)
Query: 114 NILKLIGCCLETELPTLVFESVKYGTLRGF------------SFASLLIAPRIKIAMEIA 161
++++L+G + + +V E + +G L+ + + I++A EIA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ +AYL+ + V R + A N ++ +++ K+ DF ++ I E + KG G
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR-----KGGKG 192
Query: 222 -----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
++APE F D++SFG L E +T ++G N+ VL++
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VLKFVMDG 248
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLR 332
D+ ++ P + + LM C +P RP +++ L+
Sbjct: 249 -----------GYLDQPDNCP------ERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 22/225 (9%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDD--VEYCFNN 103
++ D + NY L K I ++ + + ++V K D + L+ ++ F
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFRE 63
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
+ + H NI+KL + LV E G + F L+ R+K
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAKF 119
Query: 158 MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
+I +AV Y H F IV R +KA N+LLD + + K+ DF S G + +
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---KLDTFC 173
Query: 218 GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTGCNVLEFKGN 261
G+ + APE F ++ DV+S G L L++G L F G
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS--LPFDGQ 216
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 88/215 (40%), Gaps = 21/215 (9%)
Query: 55 NNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMK-----FHDNSTLDDVEYCFNNIVFSSQ 109
NN K + + ++ E T + +V+K + D+ E + + S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 110 M-KHKNILKLIGCCLETELPTLVFESVKYGTLRGF------------SFASLLIAPRIKI 156
+ +H+NI+ L+G C ++ E YG L F L + +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ ++A +A+L + + R + A NVLL + AK+ DF L+ I ++ +
Sbjct: 166 SSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ ++APE + DV+S+G L E+ +
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 33/241 (13%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL----RGFSFASLLIAPRI- 154
C I Q+ H N++K +E +V E G L + F LI R
Sbjct: 79 CIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV 138
Query: 155 -KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
K +++ +A+ ++H R ++ R IK +NV + KL D L T
Sbjct: 139 WKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS 195
Query: 214 EFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYA 273
+ G +++PE + +N D++S G L E+ L+ G+ +L L
Sbjct: 196 --LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA----LQSPFYGDKMNLYSL--- 246
Query: 274 KKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP---LMVDVAKQ 330
K IE + + + E+ L QL+ C++ PE RP + DVAK+
Sbjct: 247 CKKIEQCDYPPLPSDHYSEE------------LRQLVNMCINPDPEKRPDVTYVYDVAKR 294
Query: 331 L 331
+
Sbjct: 295 M 295
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 22/225 (9%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDD--VEYCFNN 103
++ D + NY L K I ++ + + ++V K D + L+ ++ F
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFRE 63
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
+ + H NI+KL + LV E G + F L+ R+K
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAKF 119
Query: 158 MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
+I +AV Y H F IV R +KA N+LLD + + K+ DF S G + +
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---KLDTFC 173
Query: 218 GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTGCNVLEFKGN 261
G+ + APE F ++ DV+S G L L++G L F G
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS--LPFDGQ 216
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 113/297 (38%), Gaps = 41/297 (13%)
Query: 55 NNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMK-----FHDNSTLDDVEYCFNNIVFSSQ 109
NN K + + ++ E T + +V+K + D+ E + + S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 110 M-KHKNILKLIGCCLETELPTLVFESVKYGTLRGF------------SFASLLIAPRIKI 156
+ +H+NI+ L+G C ++ E YG L F L + +
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ ++A +A+L + + R + A NVLL + AK+ DF L+ I ++ +
Sbjct: 158 SSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
+ ++APE + DV+S+G L E+ + L + Y
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------------LGLNPYPGIL 259
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQ 333
+ + + + D +F K ++ +M C + P HRP + L++
Sbjct: 260 VNSKFYKLVKDGYQMAQPAFAPK-----NIYSIMQACWALEPTHRPTFQQICSFLQE 311
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 55 NNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKN 114
++Y+L +VI S + + + +++ + + ++ I SQ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 115 ILKL-IGCCLETELPTL--------VFESVKYGTLRGFSFASLLIAPRI-KIAMEIANAV 164
I+ ++ EL + V + +K+ +G + +L I I E+ +
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEG----ETHVREEFIKGAY 220
YLH + R +KA N+LL E+ S ++ DF +S + G VR+ F+ G
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTP 190
Query: 221 GFIAPEYF-ATSSFNEMCDVYSFGAFLCELLTGC 253
++APE ++ D++SFG EL TG
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGA 224
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 107/260 (41%), Gaps = 30/260 (11%)
Query: 39 RNPIRAFSAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKF-HDNSTLDDV 97
+N IR + KD+++ L K + RL+E D+ VM+ H LD +
Sbjct: 61 KNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYE-VYEDEQYICLVMELCHGGHLLDKL 119
Query: 98 EYCFNNIVFSSQMKHKNILKLIGC-CLETELPTLVFESVKYGTLRGFSFASLLIAPRIK- 155
++ M +++K C C E E G++ GF SL R K
Sbjct: 120 NVFIDDSTGKCAM---DVVKTQICPCPECN------EEAINGSIHGFR-ESLDFVQREKL 169
Query: 156 ---IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDEN--YSAKLHDFSLS---VSIPEG 207
I +I +A+ YLH ++ I R IK N L N + KL DF LS + G
Sbjct: 170 ISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG 226
Query: 208 ETHVREEFIKGAYGFIAPEYFATS--SFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
E + Y F+APE T+ S+ CD +S G L LL G + F G + D
Sbjct: 227 EYYGMTTKAGTPY-FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG--AVPFPGVNDAD 283
Query: 266 DLTVLEYAKKSIENNRFGAI 285
++ + K EN + +
Sbjct: 284 TISQVLNKKLCFENPNYNVL 303
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 101/236 (42%), Gaps = 46/236 (19%)
Query: 114 NILKLIGCCLETELPTLVFESVKYGTLRGF------------SFASLLIAPRIKIAMEIA 161
++++L+G + + +V E + +G L+ + + I++A EIA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ +AYL+ + V R + A N ++ +++ K+ DF ++ I E + KG G
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAY-----YRKGGKG 192
Query: 222 -----FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
++APE F D++SFG L E +T ++G N+ L K
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVL-------KF 244
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLR 332
+ + + D+ ++ P + + LM C +P+ RP +++ L+
Sbjct: 245 VMDGGY-------LDQPDNCP------ERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A EI + +LH + IV+R +K N+LLD++ K+ DF + G+ +
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA--KTNXF 178
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G +IAPE +N D +SFG L E+L G
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 55 NNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKN 114
++Y+L +VI S + + + +++ + + ++ I SQ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 115 ILKL-IGCCLETELPTL--------VFESVKYGTLRGFSFASLLIAPRI-KIAMEIANAV 164
I+ ++ EL + V + +K+ +G + +L I I E+ +
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEG----ETHVREEFIKGAY 220
YLH + R +KA N+LL E+ S ++ DF +S + G VR+ F+ G
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTP 185
Query: 221 GFIAPEYF-ATSSFNEMCDVYSFGAFLCELLTGC 253
++APE ++ D++SFG EL TG
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGA 219
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 22/225 (9%)
Query: 46 SAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDD--VEYCFNN 103
++ D + NY L K I ++ + + ++V K D + L+ ++ F
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAV-KIIDKTQLNSSSLQKLFRE 63
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
+ + H NI+KL + LV E G + F L+ R K
Sbjct: 64 VRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEV----FDYLVAHGRXKEKEARAKF 119
Query: 158 MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
+I +AV Y H F IV R +KA N+LLD + + K+ DF S G + +
Sbjct: 120 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN---KLDAFC 173
Query: 218 GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTGCNVLEFKGN 261
GA + APE F ++ DV+S G L L++G L F G
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS--LPFDGQ 216
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 13/181 (7%)
Query: 86 MKFHDNSTLDD--VEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF 143
+K D + L+ ++ F + + H NI+KL + LV E G + +
Sbjct: 37 VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 96
Query: 144 SFASLLIAPRIKIA--MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS 201
A + + A +I +AV Y H F IV R +KA N+LLD + + K+ DF S
Sbjct: 97 LVAHGWMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 153
Query: 202 VSIPEGETHVREEFIKGAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTGCNVLEFKG 260
G + + G+ + APE F ++ DV+S G L L++G L F G
Sbjct: 154 NEFTFGN---KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS--LPFDG 208
Query: 261 N 261
Sbjct: 209 Q 209
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAME- 159
I S ++H NIL++ + + L+ E G L + R ME
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 123
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+A+A+ Y H +R ++ R IK N+L+ K+ DF SV P +R + G
Sbjct: 124 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGT 176
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
++ PE + +E D++ G E L G
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAME- 159
I S ++H NIL++ + + L+ E G L + R ME
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+A+A+ Y H +R ++ R IK N+L+ K+ DF SV P +R + G
Sbjct: 123 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGT 175
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
++ PE + +E D++ G E L G
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-RGFSFASLLIAPRIKIAME- 159
I S ++H NIL++ + + L+ E G L + R ME
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
+A+A+ Y H +R ++ R IK N+L+ K+ DF SV P +R + G
Sbjct: 123 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGT 175
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
++ PE + +E D++ G E L G
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 108 SQMKHKNILKLIGCCLETELPT-LVFESVKYGTL----RGFSFASLLIAPRIKIAMEIAN 162
+Q++H N+++L+G +E + +V E + G+L R + L +K ++++
Sbjct: 69 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 128
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGF 222
A+ YL V R + A NVL+ E+ AK+ DF L+ E ++ K +
Sbjct: 129 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKW 180
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLT 251
APE F+ DV+SFG L E+ +
Sbjct: 181 TAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 46 SAKDLKKATNNYDLHKVIQSD--TSYRLFEGTLVDQDRPISVM-KFHDNSTLDDVEYCFN 102
++ D + NY L K I +L L ++ + ++ K NS+ ++ F
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSS--SLQKLFR 62
Query: 103 NIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA----- 157
+ + H NI+KL + LV E G + F L+ R+K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV----FDYLVAHGRMKEKEARAK 118
Query: 158 -MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+I +AV Y H F IV R +KA N+LLD + + K+ DF S G + +
Sbjct: 119 FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN---KLDTF 172
Query: 217 KGAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTGCNVLEFKGN 261
G+ + APE F ++ DV+S G L L++G L F G
Sbjct: 173 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS--LPFDGQ 216
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 108 SQMKHKNILKLIGCCLETELPT-LVFESVKYGTL----RGFSFASLLIAPRIKIAMEIAN 162
+Q++H N+++L+G +E + +V E + G+L R + L +K ++++
Sbjct: 54 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 113
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGF 222
A+ YL V R + A NVL+ E+ AK+ DF L+ E ++ K +
Sbjct: 114 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKW 165
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCEL 249
APE F+ DV+SFG L E+
Sbjct: 166 TAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 20/228 (8%)
Query: 55 NNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKF------HDNSTLDDVEYCFNNIVFSS 108
++DL +VI + ++ L DR I MK +D+ +D V+ VF
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDR-IYAMKVVKKELVNDDEDIDWVQT--EKHVFEQ 65
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAVA 165
H ++ L C V E V G L F P + EI+ A+
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-FHMQRQRKLPEEHARFYSAEISLALN 124
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIKGAYGFIA 224
YLH +R I++R +K NVLLD KL D+ + + G+T G +IA
Sbjct: 125 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYIA 178
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
PE + D ++ G + E++ G + + G+ ++ D +Y
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 226
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 20/228 (8%)
Query: 55 NNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKF------HDNSTLDDVEYCFNNIVFSS 108
++DL +VI + ++ L DR I MK +D+ +D V+ VF
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDR-IYAMKVVKKELVNDDEDIDWVQT--EKHVFEQ 76
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAVA 165
H ++ L C V E V G L F P + EI+ A+
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-FHMQRQRKLPEEHARFYSAEISLALN 135
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIKGAYGFIA 224
YLH +R I++R +K NVLLD KL D+ + + G+T G +IA
Sbjct: 136 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYIA 189
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
PE + D ++ G + E++ G + + G+ ++ D +Y
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 237
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 89/233 (38%), Gaps = 32/233 (13%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI+ L G + + ++ E ++ G+L F + + + + I + +
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 144
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF +S + PE R I
Sbjct: 145 KYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIR 199
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ APE A F DV+S+G + E V+ Y ++ +
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWE--------------------VMSYGERPYWDMS 239
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
++ I +E P + +L QLM C K RP + L ++
Sbjct: 240 NQDVIKAI-EEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 89/233 (38%), Gaps = 32/233 (13%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI+ L G + + ++ E ++ G+L F + + + + I + +
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 129
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF +S + PE R I
Sbjct: 130 KYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIR 184
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ APE A F DV+S+G + E V+ Y ++ +
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWE--------------------VMSYGERPYWDMS 224
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
++ I +E P + +L QLM C K RP + L ++
Sbjct: 225 NQDVIKAI-EEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIK-I 156
E N I+ + K+ NI+ + L + +V E + G+L + + +I +
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 121
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
E A+ +LH ++ R IK+ N+LL + S KL DF I E R +
Sbjct: 122 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTMV 177
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE ++ D++S G E++ G
Sbjct: 178 GTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 96 DVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI- 154
D E + Q+ H NI KL + LV E G L F ++ R
Sbjct: 69 DKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFS 124
Query: 155 -----KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPE 206
+I ++ + + Y H IV R +K N+LL+ ++ + ++ DF LS E
Sbjct: 125 EVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-E 180
Query: 207 GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDD 266
+++ I AY +IAPE +++E CDV+S G L LL+GC F G D
Sbjct: 181 ASKKXKDK-IGTAY-YIAPEVLH-GTYDEKCDVWSTGVILYILLSGCP--PFNGANEYDI 235
Query: 267 LTVLEYAKKSIE 278
L +E K + E
Sbjct: 236 LKKVEKGKYTFE 247
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIK-I 156
E N I+ + K+ NI+ + L + +V E + G+L + + +I +
Sbjct: 63 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 122
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
E A+ +LH ++ R IK+ N+LL + S KL DF I E R +
Sbjct: 123 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSXMV 178
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE ++ D++S G E++ G
Sbjct: 179 GTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 15/158 (9%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAM--- 158
I +KHKNI++ +G E + E V G+L S L I
Sbjct: 70 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK 129
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA--KLHDFSLSVSIPEGETHVREEFI 216
+I + YLH D IV R IK NVL++ YS K+ DF S + G E F
Sbjct: 130 QILEGLKYLH---DNQIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRL-AGINPCTETFT 184
Query: 217 KGAYGFIAPEYF--ATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D++S G + E+ TG
Sbjct: 185 -GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIK-I 156
E N I+ + K+ NI+ + L + +V E + G+L + + +I +
Sbjct: 63 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 122
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
E A+ +LH ++ R IK+ N+LL + S KL DF I E R +
Sbjct: 123 CRECLQALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTMV 178
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE ++ D++S G E++ G
Sbjct: 179 GTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIK-I 156
E N I+ + K+ NI+ + L + +V E + G+L + + +I +
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV 121
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
E A+ +LH ++ R IK+ N+LL + S KL DF I E R +
Sbjct: 122 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSXMV 177
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE ++ D++S G E++ G
Sbjct: 178 GTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 20/228 (8%)
Query: 55 NNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKF------HDNSTLDDVEYCFNNIVFSS 108
++DL +VI + ++ L DR I MK +D+ +D V+ VF
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDR-IYAMKVVKKELVNDDEDIDWVQT--EKHVFEQ 61
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKI---AMEIANAVA 165
H ++ L C V E V G L F P + EI+ A+
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-FHMQRQRKLPEEHARFYSAEISLALN 120
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIKGAYGFIA 224
YLH +R I++R +K NVLLD KL D+ + + G+T G +IA
Sbjct: 121 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYIA 174
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
PE + D ++ G + E++ G + + G+ ++ D +Y
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 222
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 89/233 (38%), Gaps = 32/233 (13%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI+ L G + + ++ E ++ G+L F + + + + I + +
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 123
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF +S + PE R I
Sbjct: 124 KYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIR 178
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ APE A F DV+S+G + E V+ Y ++ +
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWE--------------------VMSYGERPYWDMS 218
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
++ I +E P + +L QLM C K RP + L ++
Sbjct: 219 NQDVIKAI-EEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 90/233 (38%), Gaps = 32/233 (13%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H NI+ L G +++ +V E ++ G+L F + + + + I+ +
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGM 137
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEFIKGAYG 221
YL D V R + A N+L++ N K+ DF LS + PE R I
Sbjct: 138 KYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 192
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
+ APE A F DV+S+G + E V+ Y ++
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWE--------------------VVSYGERPYWEMT 232
Query: 282 FGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
++ + +E P + +L QLM C K RP ++ L ++
Sbjct: 233 NQDVIKAV-EEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 22/224 (9%)
Query: 47 AKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLD--DVEYCFNNI 104
D + NY L K I ++ + R +++ K D + L+ ++ F +
Sbjct: 4 GSDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAI-KIIDKTQLNPTSLQKLFREV 62
Query: 105 VFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------M 158
+ H NI+KL + L+ E G + F L+ R+K
Sbjct: 63 RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV----FDYLVAHGRMKEKEARSKFR 118
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I +AV Y H + IV R +KA N+LLD + + K+ DF S G + + G
Sbjct: 119 QIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---KLDTFCG 172
Query: 219 AYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTGCNVLEFKGN 261
+ + APE F ++ DV+S G L L++G L F G
Sbjct: 173 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS--LPFDGQ 214
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 82 PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL- 140
P+++ +N++ + + + + + +L+G CL + + LV + + YG L
Sbjct: 48 PVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTV-QLVTQLMPYGCLL 106
Query: 141 ------RGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAK 194
RG + L+ M+IA ++YL D +V R + A NVL+ K
Sbjct: 107 DHVRENRGRLGSQDLL----NWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVK 159
Query: 195 LHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ DF L+ + ET + K ++A E F DV+S+G + EL+T
Sbjct: 160 ITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 108 SQMKHKNILKLIGCCLETELPT-LVFESVKYGTL----RGFSFASLLIAPRIKIAMEIAN 162
+Q++H N+++L+G +E + +V E + G+L R + L +K ++++
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 300
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGF 222
A+ YL V R + A NVL+ E+ AK+ DF L+ E ++ K +
Sbjct: 301 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKW 352
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLT 251
APE F+ DV+SFG L E+ +
Sbjct: 353 TAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A EI + ++H +R +V+R +K +N+LLDE+ ++ D L+ + + H
Sbjct: 297 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 349
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLTG 252
G +G++APE +++ D +S G L +LL G
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A EI + ++H +R +V+R +K +N+LLDE+ ++ D L+ + + H
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLTG 252
G +G++APE +++ D +S G L +LL G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A EI + ++H +R +V+R +K +N+LLDE+ ++ D L+ + + H
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLTG 252
G +G++APE +++ D +S G L +LL G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A EI + ++H +R +V+R +K +N+LLDE+ ++ D L+ + + H
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLTG 252
G +G++APE +++ D +S G L +LL G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 15/158 (9%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAM--- 158
I +KHKNI++ +G E + E V G+L S L I
Sbjct: 56 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK 115
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA--KLHDFSLSVSIPEGETHVREEFI 216
+I + YLH D IV R IK NVL++ YS K+ DF S + G E F
Sbjct: 116 QILEGLKYLH---DNQIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRL-AGINPCTETFT 170
Query: 217 KGAYGFIAPEYF--ATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D++S G + E+ TG
Sbjct: 171 -GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 207
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEF 215
+ EI+ A+ YLH +R I++R +K NVLLD KL D+ + + G+T
Sbjct: 159 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TST 212
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEY 272
G +IAPE + D ++ G + E++ G + + G+ ++ D +Y
Sbjct: 213 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 269
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTL-----RGFSFASLLIAPRIKIAMEIANAV 164
+ H NI+KL + LV E K G L F + A IK ++ + V
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK---QVLSGV 149
Query: 165 AYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
YLH IV R +K N+LL+ ++ K+ DF LS ++ E + ++E G
Sbjct: 150 TYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS-AVFENQKKMKERL--GTAY 203
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+IAPE ++E CDV+S G L LL G
Sbjct: 204 YIAPEVL-RKKYDEKCDVWSIGVILFILLAG 233
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 55 NNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMK-----FHDNSTLDDVEYCFNNIVFSSQ 109
NN K + + ++ E T + +V+K + D+ E + + S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 110 M-KHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRI------------ 154
+ +H+NI+ L+G C ++ E YG L F A ++ P +
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 155 -----------KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVS 203
+ ++A +A+L + + R + A NVLL + AK+ DF L+
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 204 IPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
I ++ + + ++APE + DV+S+G L E+ +
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++M+ + ++ + + + + + ++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 115 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 168
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 169 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 227
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 228 RIYTHQSDVWSYGVTVWELMT 248
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A EI+ + +LH R I++R +K NV+LD K+ DF + RE
Sbjct: 126 AAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRE--F 180
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDD 266
G +IAPE A + + D +++G L E+L G +G D+D
Sbjct: 181 CGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF----DGEDED 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-----SFASLL-----IAPR---- 153
+ ++H++I++ G C E +VFE +++G L F A LL +AP
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 154 ---IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
+ +A ++A + YL G V R + N L+ + K+ DF +S I + +
Sbjct: 135 GQLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 191
Query: 211 VREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
++ PE F DV+SFG L E+ T
Sbjct: 192 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 14/135 (10%)
Query: 126 ELPTLVFESVKYGTLRGF-----SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCI 180
+LP L E + G LR + + L P + +I++A+ YLH + I+ R +
Sbjct: 92 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDL 148
Query: 181 KASNVLLDENYSAKLH---DFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMC 237
K N++L +H D + + +GE EF+ G ++APE +
Sbjct: 149 KPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT--EFV-GTLQYLAPELLEQKKYTVTV 205
Query: 238 DVYSFGAFLCELLTG 252
D +SFG E +TG
Sbjct: 206 DYWSFGTLAFECITG 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 22/205 (10%)
Query: 96 DVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI- 154
D + ++ H NI+KL ++ +V E G L F ++ R
Sbjct: 64 DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFS 119
Query: 155 -----KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPE 206
+I ++ + + Y+H IV R +K N+LL+ ++ K+ DF LS +
Sbjct: 120 EHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 207 GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDD 266
T +++ I AY +IAPE +++E CDV+S G L LL+G F G D
Sbjct: 177 N-TKMKDR-IGTAY-YIAPEVLR-GTYDEKCDVWSAGVILYILLSGTP--PFYGKNEYDI 230
Query: 267 LTVLEYAKKSIENNRFGAIVDPIFD 291
L +E K + + ++ I D D
Sbjct: 231 LKRVETGKYAFDLPQWRTISDDAKD 255
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 14/135 (10%)
Query: 126 ELPTLVFESVKYGTLRGF-----SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCI 180
+LP L E + G LR + + L P + +I++A+ YLH + I+ R +
Sbjct: 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDL 147
Query: 181 KASNVLLDENYSAKLH---DFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMC 237
K N++L +H D + + +GE EF+ G ++APE +
Sbjct: 148 KPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT--EFV-GTLQYLAPELLEQKKYTVTV 204
Query: 238 DVYSFGAFLCELLTG 252
D +SFG E +TG
Sbjct: 205 DYWSFGTLAFECITG 219
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-----SFASLL-----IAPR---- 153
+ ++H++I++ G C E +VFE +++G L F A LL +AP
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 154 ---IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
+ +A ++A + YL G V R + N L+ + K+ DF +S I + +
Sbjct: 129 GQLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 185
Query: 211 VREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
++ PE F DV+SFG L E+ T
Sbjct: 186 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-----SFASLL-----IAPR---- 153
+ ++H++I++ G C E +VFE +++G L F A LL +AP
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 154 ---IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETH 210
+ +A ++A + YL G V R + N L+ + K+ DF +S I + +
Sbjct: 158 GQLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 214
Query: 211 VREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
++ PE F DV+SFG L E+ T
Sbjct: 215 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 86/240 (35%), Gaps = 46/240 (19%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAV 164
Q H N++ L G + +V E ++ G L F + + + IA +
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGM 158
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PE-------GETHVREE 214
YL D V R + A N+L++ N K+ DF LS I PE G+ VR
Sbjct: 159 RYLA---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR-- 213
Query: 215 FIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAK 274
+ APE F DV+S+G + E V+ Y +
Sbjct: 214 -------WTAPEAIQYRKFTSASDVWSYGIVMWE--------------------VMSYGE 246
Query: 275 KSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
+ + ++ I +E P + L QLM C K RP + L +M
Sbjct: 247 RPYWDMSNQDVIKAI-EEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEF 215
A EIA + +L + I++R +K NV+LD K+ DF + +I +G V +
Sbjct: 127 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKX 180
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDD 266
G +IAPE A + + D ++FG L E+L G E G D+D
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE----GEDED 227
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 83/203 (40%), Gaps = 11/203 (5%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAP-RIKIAM 158
I ++ H NI+ L+ +LVF+ ++ SL++ P IK M
Sbjct: 59 ALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYM 118
Query: 159 EIA-NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
+ + YLH + I+ R +K +N+LLDEN KL DF L+ S + +
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVT 175
Query: 218 GAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLT-VLEYAKK 275
Y APE F + D+++ G L ELL L G+ + D LT + E
Sbjct: 176 RWYR--APELLFGARMYGVGVDMWAVGCILAELLLRVPFLP--GDSDLDQLTRIFETLGT 231
Query: 276 SIENNRFGAIVDPIFDEDNSFPG 298
E P + SFPG
Sbjct: 232 PTEEQWPDMCSLPDYVTFKSFPG 254
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 61 KVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNI-VFSSQMKHKNILKLI 119
KV+++ T+Y L + D ++V ++ L + E + + V S H NI+ L+
Sbjct: 54 KVVEA-TAYGLIKS---DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 109
Query: 120 GCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPRI--------------KIAM 158
G C PTLV E YG L F SF +P I +
Sbjct: 110 GAC-TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY 168
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
++A +A+L + + R + A N+LL K+ DF L+ I +V + +
Sbjct: 169 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 225
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
++APE + DV+S+G FL EL +
Sbjct: 226 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 61 KVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNI-VFSSQMKHKNILKLI 119
KV+++ T+Y L + D ++V ++ L + E + + V S H NI+ L+
Sbjct: 56 KVVEA-TAYGLIKS---DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 111
Query: 120 GCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPRI--------------KIAM 158
G C PTLV E YG L F SF +P I +
Sbjct: 112 GAC-TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY 170
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
++A +A+L + + R + A N+LL K+ DF L+ I +V + +
Sbjct: 171 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 227
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
++APE + DV+S+G FL EL +
Sbjct: 228 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIK 217
EI +A+ YLH R +V+R IK N++LD++ K+ DF L I +G T +
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFC 171
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D + G + E++ G
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEF 215
A EIA + +L + I++R +K NV+LD K+ DF + +I +G V +
Sbjct: 448 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKX 501
Query: 216 IKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDD 266
G +IAPE A + + D ++FG L E+L G E G D+D
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE----GEDED 548
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 61 KVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNI-VFSSQMKHKNILKLI 119
KV+++ T+Y L + D ++V ++ L + E + + V S H NI+ L+
Sbjct: 38 KVVEA-TAYGLIKS---DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 93
Query: 120 GCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPRI--------------KIAM 158
G C PTLV E YG L F SF +P I +
Sbjct: 94 GAC-TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY 152
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
++A +A+L + + R + A N+LL K+ DF L+ I +V + +
Sbjct: 153 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 209
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
++APE + DV+S+G FL EL +
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIK 217
EI +A+ YLH R +V+R IK N++LD++ K+ DF L I +G T +
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFC 166
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D + G + E++ G
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 67/165 (40%), Gaps = 25/165 (15%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA 157
E C N + + H+N++K G E + L E G L F I P I +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMP 102
Query: 158 --------MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE 208
++ V YLH +G I R IK N+LLDE + K+ DF L+
Sbjct: 103 EPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 209 THVREEFIKGAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 159 RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 32/239 (13%)
Query: 40 NPIRAFSAKDL---KKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDD 96
+P R+ DL + ++L +++ + T ++++G V + ++ +K D T D+
Sbjct: 6 SPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQ-LAAIKVMD-VTGDE 63
Query: 97 VEYCFNNI-VFSSQMKHKNILKLIGCCLETELP------TLVFESVKYGTL-------RG 142
E I + H+NI G ++ P LV E G++ +G
Sbjct: 64 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG 123
Query: 143 FSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSV 202
+ IA I EI +++LH ++ R IK NVLL EN KL DF +S
Sbjct: 124 NTLKEEWIA---YICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177
Query: 203 SIPEGETHVREEFIKGAYGFIAPEYFA-----TSSFNEMCDVYSFGAFLCELLTGCNVL 256
+ + R FI Y ++APE A ++++ D++S G E+ G L
Sbjct: 178 QL-DRTVGRRNTFIGTPY-WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIK 217
EI +A+ YLH R +V+R IK N++LD++ K+ DF L I +G T +
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFC 166
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D + G + E++ G
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIK 217
EI +A+ YLH R +V+R IK N++LD++ K+ DF L I +G T +
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFC 166
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D + G + E++ G
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 149 LIAPRIKI-AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEG 207
+ PR + A EIA+A+ YLH IV+R +K N+LLD L DF L E
Sbjct: 136 FLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192
Query: 208 ETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+ G ++APE ++ D + GA L E+L G
Sbjct: 193 NSTTST--FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 114/263 (43%), Gaps = 44/263 (16%)
Query: 85 VMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF- 143
++K D + + E F S++ HK+++ G C+ + LV E VK+G+L +
Sbjct: 44 LLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL 103
Query: 144 --SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL--DENYSA------ 193
+ + I ++++A ++A A+ +L + ++ + A N+LL +E+
Sbjct: 104 KKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFI 160
Query: 194 KLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT-SSFNEMCDVYSFGAFLCELLTG 252
KL D +S+++ + ++ ++ ++ PE + N D +SFG L E+ +
Sbjct: 161 KLSDPGISITV------LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS- 213
Query: 253 CNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYK 312
G D L+ L+ +K +++ + P K L L+
Sbjct: 214 ---------GGDKPLSALDSQRKL-----------QFYEDRHQLPAP--KAAELANLINN 251
Query: 313 CLSKSPEHRPLMVDVAKQLRQMY 335
C+ P+HRP + + L ++
Sbjct: 252 CMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
I + + H+N++K G E + L E G L F I P I +
Sbjct: 56 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMPEPDAQR 109
Query: 158 --MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ V YLH +G I R IK N+LLDE + K+ DF L+
Sbjct: 110 FFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 215 FIKGAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 166 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 20/159 (12%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
I + + H+N++K G E + L E G L F I P I +
Sbjct: 55 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMPEPDAQR 108
Query: 158 --MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ V YLH +G I R IK N+LLDE + K+ DF L+
Sbjct: 109 FFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 215 FIKGAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 61 KVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNI-VFSSQMKHKNILKLI 119
KV+++ T+Y L + D ++V ++ L + E + + V S H NI+ L+
Sbjct: 61 KVVEA-TAYGLIKS---DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 116
Query: 120 GCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPRI--------------KIAM 158
G C PTLV E YG L F SF +P I +
Sbjct: 117 GAC-TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY 175
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
++A +A+L + + R + A N+LL K+ DF L+ I +V + +
Sbjct: 176 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 232
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
++APE + DV+S+G FL EL +
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 67/165 (40%), Gaps = 25/165 (15%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA 157
E C N + + H+N++K G E + L E G L F I P I +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMP 102
Query: 158 --------MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE 208
++ V YLH +G I R IK N+LLDE + K+ DF L+
Sbjct: 103 EPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 209 THVREEFIKGAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 159 RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 35/169 (20%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I + +IA +A++ R + R ++A+N+L+ + K+ DF L+ V
Sbjct: 281 IDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLA--------RVGA 329
Query: 214 EFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYA 273
+F + APE SF DV+SFG L E++T + + G N + + LE
Sbjct: 330 KF---PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI-PYPGMSNPEVIRALERG 385
Query: 274 KKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
+ P E + L +M +C PE RP
Sbjct: 386 YR--------------------MPRPENCPEELYNIMMRCWKNRPEERP 414
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIK 217
EI +A+ YLH R +V+R IK N++LD++ K+ DF L I +G T +
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFC 166
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D + G + E++ G
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 69/162 (42%), Gaps = 26/162 (16%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
I ++ + H+N++K G E + L E G L F I P I +
Sbjct: 56 ICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMPEPDAQR 109
Query: 158 --MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ V YLH +G I R IK N+LLDE + K+ DF L+ + RE
Sbjct: 110 FFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRER 162
Query: 215 FIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 16/231 (6%)
Query: 48 KDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFS 107
KD + Y+LH+ I + ++ + +++ N+ D+ I
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKIAMEIANAV 164
++H++I +L +V E G L + + ++ R+ + +I +AV
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAV 121
Query: 165 AYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIA 224
AY+H + R +K N+L DE + KL DF L P+G + G+ + A
Sbjct: 122 AYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLAYAA 177
Query: 225 PEYFATSSF-NEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAK 274
PE S+ DV+S G L L+ C L F DDD + Y K
Sbjct: 178 PELIQGKSYLGSEADVWSMGILLYVLM--CGFLPF-----DDDNVMALYKK 221
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 19/153 (12%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLI------APRIKIAMEIAN 162
+++H NI++L E LVF+ V G L F ++ A +I
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILE 139
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++AY H IV R +K N+LL + + KL DF L++ + + E G
Sbjct: 140 SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGT 193
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G+++PE +++ D+++ G L LL G
Sbjct: 194 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 37/252 (14%)
Query: 110 MKHKNILKLI-----GCCLETELPTLVFESVKYGTLRGFSFASLLIAPR-IKIAMEIANA 163
M+H+NIL I G T+L L+ + + G+L + ++ L A +K+A +
Sbjct: 88 MRHENILGFIAADIKGTGSWTQL-YLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSG 146
Query: 164 VAYLHVGF----DRP-IVFRCIKASNVLLDENYSAKLHDFSLSVSI--PEGETHVREEFI 216
+ +LH +P I R +K+ N+L+ +N + + D L+V E +
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR 206
Query: 217 KGAYGFIAPEYFATSSFNE-------MCDVYSFGAFLCEL----LTGCNVLEFKGNGNDD 265
G ++ PE S N M D+YSFG L E+ ++G V E++ +D
Sbjct: 207 VGTKRYMPPEVL-DESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD- 264
Query: 266 DLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGK---EEKLQSLGQLMYKCLSKSPEHRP 322
L + S E+ R + + SFP + +E L+ +G+LM +C + +P R
Sbjct: 265 ----LVPSDPSYEDMREIVCIKKL---RPSFPNRWSSDECLRQMGKLMTECWAHNPASRL 317
Query: 323 LMVDVAKQLRQM 334
+ V K L +M
Sbjct: 318 TALRVKKTLAKM 329
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 70/168 (41%), Gaps = 31/168 (18%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA 157
E C N + + H+N++K G E + L E G L F I P I +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMP 102
Query: 158 --------MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE 208
++ V YLH +G I R IK N+LLDE + K+ DF L+
Sbjct: 103 EPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---R 155
Query: 209 THVREEFIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ RE + G ++APE F+ E DV+S G L +L G
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 61 KVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNI-VFSSQMKHKNILKLI 119
KV+++ T+Y L + D ++V ++ L + E + + V S H NI+ L+
Sbjct: 61 KVVEA-TAYGLIKS---DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 116
Query: 120 GCCLETELPTLVF-ESVKYGTLRGF------SFASLLIAPRI--------------KIAM 158
G C PTLV E YG L F SF +P I +
Sbjct: 117 GAC-TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY 175
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
++A +A+L + + R + A N+LL K+ DF L+ I +V + +
Sbjct: 176 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARL 232
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
++APE + DV+S+G FL EL +
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 70/168 (41%), Gaps = 31/168 (18%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA 157
E C N + + H+N++K G E + L E G L F I P I +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMP 103
Query: 158 --------MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE 208
++ V YLH +G I R IK N+LLDE + K+ DF L+
Sbjct: 104 EPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---R 156
Query: 209 THVREEFIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ RE + G ++APE F+ E DV+S G L +L G
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 22/201 (10%)
Query: 96 DVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI- 154
D + ++ H NI+KL ++ +V E G L F ++ R
Sbjct: 64 DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFS 119
Query: 155 -----KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPE 206
+I ++ + + Y+H IV R +K N+LL+ ++ K+ DF LS +
Sbjct: 120 EHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 207 GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDD 266
T +++ G +IAPE +++E CDV+S G L LL+G F G D
Sbjct: 177 N-TKMKDRI--GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTP--PFYGKNEYDI 230
Query: 267 LTVLEYAKKSIENNRFGAIVD 287
L +E K + + ++ I D
Sbjct: 231 LKRVETGKYAFDLPQWRTISD 251
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 20/165 (12%)
Query: 97 VEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIK- 155
V+ N + Q+KH +IL+L ++ LV E G + + + R+K
Sbjct: 55 VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRY------LKNRVKP 108
Query: 156 --------IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEG 207
+I + YLH I+ R + SN+LL N + K+ DF L+ +
Sbjct: 109 FSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK-- 163
Query: 208 ETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
H + + G +I+PE S+ DV+S G LL G
Sbjct: 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIG 208
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 22/201 (10%)
Query: 96 DVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI- 154
D + ++ H NI+KL ++ +V E G L F ++ R
Sbjct: 64 DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFS 119
Query: 155 -----KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPE 206
+I ++ + + Y+H IV R +K N+LL+ ++ K+ DF LS +
Sbjct: 120 EHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 207 GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDD 266
T +++ G +IAPE +++E CDV+S G L LL+G F G D
Sbjct: 177 N-TKMKDRI--GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTP--PFYGKNEYDI 230
Query: 267 LTVLEYAKKSIENNRFGAIVD 287
L +E K + + ++ I D
Sbjct: 231 LKRVETGKYAFDLPQWRTISD 251
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIK 217
EI +A+ YLH R +V+R IK N++LD++ K+ DF L I +G T +
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFC 166
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D + G + E++ G
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 88 RLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 141
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 201 RIYTHQSDVWSYGVTVWELMT 221
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
I + + H+N++K G E + L E G L F I P I +
Sbjct: 55 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMPEPDAQR 108
Query: 158 --MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ V YLH +G I R IK N+LLDE + K+ DF L+ + RE
Sbjct: 109 FFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRER 161
Query: 215 FIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
I + N+ +Y+H ++ I R +K SN+L+D+N KL DF E E V ++
Sbjct: 156 IIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG------ESEYMVDKKI 207
Query: 216 --IKGAYGFIAPEYFAT-SSFN-EMCDVYSFGAFLCELLTGCNVLEF 258
+G Y F+ PE+F+ SS+N D++S G +C + NV+ F
Sbjct: 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLG--ICLYVMFYNVVPF 252
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 67/165 (40%), Gaps = 25/165 (15%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA 157
E C N + + H+N++K G E + L E G L F I P I +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDR--IEPDIGMP 102
Query: 158 --------MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE 208
++ V YLH +G I R IK N+LLDE + K+ DF L+
Sbjct: 103 EPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 158
Query: 209 THVREEFIKGAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 159 RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIK 217
EI +A+ YLH R +V+R IK N++LD++ K+ DF L I +G T +
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFC 169
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D + G + E++ G
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 204
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 23/175 (13%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ ++A + +L R + R + A N+LL E K+ DF L+ I + +VR+
Sbjct: 199 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
+ ++APE + DV+SFG L E+ + + G D+ E+ ++
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EFCRRL 309
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
E R A D + P + Q M C P RP ++ + L
Sbjct: 310 KEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
I + + H+N++K G E + L E G L F I P I +
Sbjct: 54 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMPEPDAQR 107
Query: 158 --MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ V YLH +G I R IK N+LLDE + K+ DF L+ + RE
Sbjct: 108 FFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRER 160
Query: 215 FIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 23/175 (13%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ ++A + +L R + R + A N+LL E K+ DF L+ I + +VR+
Sbjct: 204 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
+ ++APE + DV+SFG L E+ + + G D+ E+ ++
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EFCRRL 314
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
E R A D + P + Q M C P RP ++ + L
Sbjct: 315 KEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 70/168 (41%), Gaps = 31/168 (18%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA 157
E C N + + H+N++K G E + L E G L F I P I +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMP 103
Query: 158 --------MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE 208
++ V YLH +G I R IK N+LLDE + K+ DF L+
Sbjct: 104 EPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---R 156
Query: 209 THVREEFIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ RE + G ++APE F+ E DV+S G L +L G
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 70/168 (41%), Gaps = 31/168 (18%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA 157
E C N + + H+N++K G E + L E G L F I P I +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMP 103
Query: 158 --------MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE 208
++ V YLH +G I R IK N+LLDE + K+ DF L+
Sbjct: 104 EPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---R 156
Query: 209 THVREEFIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ RE + G ++APE F+ E DV+S G L +L G
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 70/168 (41%), Gaps = 31/168 (18%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA 157
E C N + + H+N++K G E + L E G L F I P I +
Sbjct: 55 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMP 103
Query: 158 --------MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE 208
++ V YLH +G I R IK N+LLDE + K+ DF L+
Sbjct: 104 EPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---R 156
Query: 209 THVREEFIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ RE + G ++APE F+ E DV+S G L +L G
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 23/175 (13%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ ++A + +L R + R + A N+LL E K+ DF L+ I + +VR+
Sbjct: 197 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
+ ++APE + DV+SFG L E+ + + G D+ E+ ++
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EFCRRL 307
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
E R A D + P + Q M C P RP ++ + L
Sbjct: 308 KEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
I + + H+N++K G E + L E G L F I P I +
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMPEPDAQR 109
Query: 158 --MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ V YLH +G I R IK N+LLDE + K+ DF L+ + RE
Sbjct: 110 FFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRER 162
Query: 215 FIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 82 RLLGICLTSTV-QLIMQLMPFGXLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 135
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 136 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 195 RIYTHQSDVWSYGVTVWELMT 215
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 70/168 (41%), Gaps = 31/168 (18%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA 157
E C N + + H+N++K G E + L E G L F I P I +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMP 102
Query: 158 --------MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE 208
++ V YLH +G I R IK N+LLDE + K+ DF L+
Sbjct: 103 EPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---R 155
Query: 209 THVREEFIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ RE + G ++APE F+ E DV+S G L +L G
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
I + + H+N++K G E + L E G L F I P I +
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDR--IEPDIGMPEPDAQR 108
Query: 158 --MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ V YLH +G I R IK N+LLDE + K+ DF L+ + RE
Sbjct: 109 FFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRER 161
Query: 215 FIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 70/168 (41%), Gaps = 31/168 (18%)
Query: 98 EYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA 157
E C N + + H+N++K G E + L E G L F I P I +
Sbjct: 54 EICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMP 102
Query: 158 --------MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE 208
++ V YLH +G I R IK N+LLDE + K+ DF L+
Sbjct: 103 EPDAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---R 155
Query: 209 THVREEFIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ RE + G ++APE F+ E DV+S G L +L G
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 15/154 (9%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL-----RGFSFASLLIAPRIKIAM 158
I + + H NIL+L + L+ E G L + +F A I
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA---TIME 130
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
E+A+A+ Y H + ++ R IK N+LL K+ DF SV P +R + + G
Sbjct: 131 ELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRKTMCG 183
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
++ PE NE D++ G ELL G
Sbjct: 184 TLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 84 RLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 137
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 197 RIYTHQSDVWSYGVTVWELMT 217
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
I + + H+N++K G E + L E G L F I P I +
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FD----RIEPDIGMPEPDAQR 108
Query: 158 --MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ V YLH +G I R IK N+LLDE + K+ DF L+ + RE
Sbjct: 109 FFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRER 161
Query: 215 FIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 83 RLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 136
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 23/175 (13%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
+ ++A + +L R + R + A N+LL E K+ DF L+ I + +VR+
Sbjct: 206 SFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKS 276
+ ++APE + DV+SFG L E+ + + G D+ E+ ++
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDE-----EFCRRL 316
Query: 277 IENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQL 331
E R A D + P + Q M C P RP ++ + L
Sbjct: 317 KEGTRMRA-------PDYTTP-------EMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 81 RLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 134
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 113/263 (42%), Gaps = 44/263 (16%)
Query: 85 VMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF- 143
++K D + + E F S++ HK+++ G C + LV E VK+G+L +
Sbjct: 44 LLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL 103
Query: 144 --SFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL--DENYSA------ 193
+ + I ++++A ++A A+ +L + ++ + A N+LL +E+
Sbjct: 104 KKNKNCINILWKLEVAKQLAWAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFI 160
Query: 194 KLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT-SSFNEMCDVYSFGAFLCELLTG 252
KL D +S+++ + ++ ++ ++ PE + N D +SFG L E+ +
Sbjct: 161 KLSDPGISITV------LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS- 213
Query: 253 CNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYK 312
G D L+ L+ +K +++ + P K L L+
Sbjct: 214 ---------GGDKPLSALDSQRKL-----------QFYEDRHQLPAP--KAAELANLINN 251
Query: 313 CLSKSPEHRPLMVDVAKQLRQMY 335
C+ P+HRP + + L ++
Sbjct: 252 CMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTL---------RGFSFASLLIAPRIKIAMEI 160
+KH +I++L+ + +VFE + L GF ++ + + ++ +I
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR---QI 139
Query: 161 ANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFSLSVSIPEGETHVREEFIK 217
A+ Y H D I+ R +K NVLL + + KL DF +++ + GE+ +
Sbjct: 140 LEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGGRV 194
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGN 261
G F+APE + + DV+ G L LL+GC L F G
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGC--LPFYGT 236
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
I + + H+N++K G E + L E G L F I P I +
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDR--IEPDIGMPEPDAQR 108
Query: 158 --MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ V YLH +G I R IK N+LLDE + K+ DF L+ + RE
Sbjct: 109 FFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRER 161
Query: 215 FIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 82 RLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 135
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 136 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 195 RIYTHQSDVWSYGVTVWELMT 215
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
I + + H+N++K G E + L E G L F I P I +
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDR--IEPDIGMPEPDAQR 108
Query: 158 --MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ V YLH +G I R IK N+LLDE + K+ DF L+ + RE
Sbjct: 109 FFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRER 161
Query: 215 FIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 85 RLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 138
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 139 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 198 RIYTHQSDVWSYGVTVWELMT 218
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 14/149 (9%)
Query: 112 HKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVAYLHV 169
H NI++L LVF+ +K G L + + ++ + KI + + LH
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH- 128
Query: 170 GFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFA 229
IV R +K N+LLD++ + KL DF S + GE +RE + G ++APE
Sbjct: 129 --KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LRE--VCGTPSYLAPEIIE 183
Query: 230 TS------SFNEMCDVYSFGAFLCELLTG 252
S + + D++S G + LL G
Sbjct: 184 CSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIA------ 157
I + + H+N++K G E + L E G L F I P I +
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDR--IEPDIGMPEPDAQR 109
Query: 158 --MEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ V YLH +G I R IK N+LLDE + K+ DF L+ + RE
Sbjct: 110 FFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRER 162
Query: 215 FIK---GAYGFIAPEYFATSSFN-EMCDVYSFGAFLCELLTG 252
+ G ++APE F+ E DV+S G L +L G
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 143 FSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSV 202
+S +I I + +A A H+ + I+ R IK SN+LLD + + KL DF +S
Sbjct: 115 YSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG 174
Query: 203 SIPEGETHVREEFIKGAYGFIAPEYFATSS----FNEMCDVYSFGAFLCELLTG 252
+ + R+ G ++APE S+ ++ DV+S G L EL TG
Sbjct: 175 QLVDSIAKTRD---AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
++ R +K +NV LD + KL DF L+ + E +E F+ Y +++PE S+N
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE-FVGTPY-YMSPEQMNRMSYN 194
Query: 235 EMCDVYSFGAFLCEL 249
E D++S G L EL
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 150 IAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGET 209
I RI M +A A ++ ++ R +K SN+LLDE KL DF +S + + +
Sbjct: 121 IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180
Query: 210 HVREEFIKGAYGFIAPEYF-----ATSSFNEMCDVYSFGAFLCELLTG 252
R G ++APE ++ DV+S G L EL TG
Sbjct: 181 KDRSA---GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATG 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 14/149 (9%)
Query: 112 HKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVAYLHV 169
H NI++L LVF+ +K G L + + ++ + KI + + LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH- 141
Query: 170 GFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFA 229
IV R +K N+LLD++ + KL DF S + GE +RE + G ++APE
Sbjct: 142 --KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LRE--VCGTPSYLAPEIIE 196
Query: 230 TS------SFNEMCDVYSFGAFLCELLTG 252
S + + D++S G + LL G
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 19/153 (12%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLI------APRIKIAMEIAN 162
+++H NI++L E LVF+ V G L F ++ A +I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILE 116
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++AY H IV R +K N+LL + + KL DF L++ + + E G
Sbjct: 117 SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGT 170
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G+++PE +++ D+++ G L LL G
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S ++ D+++ G + +L+ G
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 19/153 (12%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLI------APRIKIAMEIAN 162
+++H NI++L E LVF+ V G L F ++ A +I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILE 116
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++AY H IV R +K N+LL + + KL DF L++ + + E G
Sbjct: 117 SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGT 170
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G+++PE +++ D+++ G L LL G
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 31/250 (12%)
Query: 30 KLIATFNGKR----NPIRAFSAKDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISV 85
K+I ++ G +P + + + NN K + + ++ E T + +V
Sbjct: 17 KIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAV 76
Query: 86 MK-----FHDNSTLDDVEYCFNNIVFSSQM-KHKNILKLIGCCLETELPTLVFESVKYGT 139
+K + D+ E + + S + +H+NI+ L+G C ++ E YG
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 140 LRGF-----------SF-------ASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIK 181
L F S+ L + + ++A +A+L + + R +
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLA---SKNCIHRDVA 193
Query: 182 ASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYS 241
A NVLL + AK+ DF L+ I ++ + + ++APE + DV+S
Sbjct: 194 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 253
Query: 242 FGAFLCELLT 251
+G L E+ +
Sbjct: 254 YGILLWEIFS 263
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 19/153 (12%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLI------APRIKIAMEIAN 162
+++H NI++L E LVF+ V G L F ++ A +I
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILE 115
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
++AY H IV R +K N+LL + + KL DF L++ + + E G
Sbjct: 116 SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGT 169
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G+++PE +++ D+++ G L LL G
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 88 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 141
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 201 RIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 81 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 134
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 81 RLLGICLTSTV-QLITQLMPFGXLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 134
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 84 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 137
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 197 RIYTHQSDVWSYGVTVWELMT 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 91 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 144
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 145 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 203
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 204 RIYTHQSDVWSYGVTVWELMT 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 84 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 137
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 197 RIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 88 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 141
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 201 RIYTHQSDVWSYGVTVWELMT 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 81 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 134
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 81 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 134
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 84 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 137
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 197 RIYTHQSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 106 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 159
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 160 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 218
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 219 RIYTHQSDVWSYGVTVWELMT 239
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 83 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 136
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 87 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 140
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 141 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 199
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 200 RIYTHQSDVWSYGVTVWELMT 220
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 68/163 (41%), Gaps = 25/163 (15%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL------RGFSF---ASLLIAP 152
N I ++KH NI+ L L+ + V G L +GF AS LI
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI-- 122
Query: 153 RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVL---LDENYSAKLHDFSLSVSIPEGET 209
++ +AV YLH D IV R +K N+L LDE+ + DF LS G
Sbjct: 123 -----FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 210 HVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G G++APE A +++ D +S G LL G
Sbjct: 175 L---STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
++ R +K +NV LD + KL DF L+ I +T + F+ Y +++PE S+N
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLA-RILNHDTSFAKTFVGTPY-YMSPEQMNRMSYN 194
Query: 235 EMCDVYSFGAFLCEL 249
E D++S G L EL
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
++ R +K +NV LD + KL DF L+ I +T + F+ Y +++PE S+N
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLA-RILNHDTSFAKAFVGTPY-YMSPEQMNRMSYN 194
Query: 235 EMCDVYSFGAFLCEL 249
E D++S G L EL
Sbjct: 195 EKSDIWSLGCLLYEL 209
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 68/163 (41%), Gaps = 25/163 (15%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL------RGFSF---ASLLIAP 152
N I ++KH NI+ L L+ + V G L +GF AS LI
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI-- 122
Query: 153 RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVL---LDENYSAKLHDFSLSVSIPEGET 209
++ +AV YLH D IV R +K N+L LDE+ + DF LS G
Sbjct: 123 -----FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 210 HVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G G++APE A +++ D +S G LL G
Sbjct: 175 L---STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
E+ A+ YL ++ I+ R +K N+LLDE+ + DF+++ +P ET + + G
Sbjct: 123 ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT--MAG 176
Query: 219 AYGFIAPEYFAT---SSFNEMCDVYSFGAFLCELLTG 252
++APE F++ + ++ D +S G ELL G
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 19/120 (15%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ +I + V Y H +V R +K NVLLD + +AK+ DF LS + +G E
Sbjct: 120 RLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG------E 170
Query: 215 FIK---GAYGFIAPEYFATSSF-NEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
F++ G+ + APE + + D++S G L LL C L F +DD + L
Sbjct: 171 FLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALL--CGTLPF----DDDHVPTL 224
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 78 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAEGMNYLE-- 131
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 132 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 190
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 191 RIYTHQSDVWSYGVTVWELMT 211
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 75 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 128
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF L+ + E E K ++A E
Sbjct: 129 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 188 RIYTHQSDVWSYGVTVWELMT 208
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 68/163 (41%), Gaps = 25/163 (15%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL------RGFSF---ASLLIAP 152
N I ++KH NI+ L L+ + V G L +GF AS LI
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI-- 122
Query: 153 RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVL---LDENYSAKLHDFSLSVSIPEGET 209
++ +AV YLH D IV R +K N+L LDE+ + DF LS G
Sbjct: 123 -----FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 210 HVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G G++APE A +++ D +S G LL G
Sbjct: 175 LST---ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 68/163 (41%), Gaps = 25/163 (15%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL------RGFSF---ASLLIAP 152
N I ++KH NI+ L L+ + V G L +GF AS LI
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI-- 122
Query: 153 RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVL---LDENYSAKLHDFSLSVSIPEGET 209
++ +AV YLH D IV R +K N+L LDE+ + DF LS G
Sbjct: 123 -----FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 210 HVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G G++APE A +++ D +S G LL G
Sbjct: 175 LST---ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIA 161
Q H NI++L G + + ++ E ++ G L F F+ L + ++ IA
Sbjct: 101 GQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIA 157
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEG-ETHVREEFIKGAY 220
+ YL + V R + A N+L++ N K+ DF LS + + E K
Sbjct: 158 AGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPI 214
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ APE + F DV+SFG + E++T
Sbjct: 215 RWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 112 HKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVAYLHV 169
H NI++L LVF+ +K G L + + ++ + KI + + LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH- 141
Query: 170 GFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFA 229
IV R +K N+LLD++ + KL DF S + GE + + G ++APE
Sbjct: 142 --KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLRSVCGTPSYLAPEIIE 196
Query: 230 TS------SFNEMCDVYSFGAFLCELLTG 252
S + + D++S G + LL G
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKY----------GTLRGFSFASLLIAPRIKIAM 158
++KH NI+KL + LVFE + G L + S L +
Sbjct: 56 ELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL--------L 107
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
++ N +AY H DR ++ R +K N+L++ K+ DF L+ + E +
Sbjct: 108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL 164
Query: 219 AYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
Y AP+ S ++ D++S G E++ G + F G D L
Sbjct: 165 WYR--APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL--FPGVSEADQL 210
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIP-EGETHVREEFIK 217
+ V YLH + ++ R +K N+ L+++ K+ DF L+ I +GE R++ +
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKXLC 203
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G +IAPE + D++S G L LL G
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ +I +AV Y H +V R +K NVLLD + +AK+ DF LS + +G E
Sbjct: 115 RLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG------E 165
Query: 215 FIK---GAYGFIAPEYFATSSF-NEMCDVYSFGAFLCELLTGCNVLEF 258
F++ G+ + APE + + D++S G L LL C L F
Sbjct: 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL--CGTLPF 211
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKY----------GTLRGFSFASLLIAPRIKIAM 158
++KH NI+KL + LVFE + G L + S L +
Sbjct: 56 ELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL--------L 107
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
++ N +AY H DR ++ R +K N+L++ K+ DF L+ + E +
Sbjct: 108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL 164
Query: 219 AYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
Y AP+ S ++ D++S G E++ G + F G D L
Sbjct: 165 WYR--APDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPL--FPGVSEADQL 210
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
++ +I +AV Y H +V R +K NVLLD + +AK+ DF LS + +G E
Sbjct: 115 RLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG------E 165
Query: 215 FIK---GAYGFIAPEYFATSSF-NEMCDVYSFGAFLCELLTGCNVLEF 258
F++ G+ + APE + + D++S G L LL C L F
Sbjct: 166 FLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL--CGTLPF 211
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 160 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 216
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 217 --SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 268
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 158 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 215 --SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 266
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIK 217
EI +A+ YLH ++ +V+R +K N++LD++ K+ DF L I +G T +
Sbjct: 259 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFC 313
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D + G + E++ G
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 348
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
EI +A+ YLH + I+ R +K N+LL+E+ ++ DF + + R G
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+++PE S + D+++ G + +L+ G
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIK 217
EI +A+ YLH ++ +V+R +K N++LD++ K+ DF L I +G T +
Sbjct: 256 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFC 310
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D + G + E++ G
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 162 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 218
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 219 --SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 270
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 203 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 259
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 260 --SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 311
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 87/217 (40%), Gaps = 28/217 (12%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVA 165
++ H ++K G C + +V E + G L + L + +++ ++ +A
Sbjct: 59 KLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA 118
Query: 166 YLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAP 225
+L + R + A N L+D + K+ DF ++ + + + +V K + AP
Sbjct: 119 FLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAP 174
Query: 226 EYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRFGAI 285
E F ++ DV++FG + E+ + G D T E K + +R +
Sbjct: 175 EVFHYFKYSSKSDVWAFGILMWEVFS-------LGKMPYDLYTNSEVVLKVSQGHR---L 224
Query: 286 VDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRP 322
P D + Q+MY C + PE RP
Sbjct: 225 YRPHLASDTIY-----------QIMYSCWHELPEKRP 250
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 137 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 193
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 194 --SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 245
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIK 217
EI +A+ YLH ++ +V+R +K N++LD++ K+ DF L I +G T +
Sbjct: 116 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFC 170
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D + G + E++ G
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 205
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 83 RLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 136
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF + + E E K ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIK 217
EI +A+ YLH ++ +V+R +K N++LD++ K+ DF L I +G T +
Sbjct: 117 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFC 171
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D + G + E++ G
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIK 217
EI +A+ YLH ++ +V+R +K N++LD++ K+ DF L I +G T +
Sbjct: 118 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFC 172
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + + D + G + E++ G
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 207
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIP-EGETHVREEFIK 217
+ V YLH + ++ R +K N+ L+++ K+ DF L+ I +GE R++ +
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKTLC 203
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G +IAPE + D++S G L LL G
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKY----------GTLRGFSFASLLIAPRIKIAM 158
++KH NI+KL + LVFE + G L + S L +
Sbjct: 56 ELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL--------L 107
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
++ N +AY H DR ++ R +K N+L++ K+ DF L+ + E +
Sbjct: 108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL 164
Query: 219 AYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
Y AP+ S ++ D++S G E++ G + F G D L
Sbjct: 165 WYR--APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL--FPGVSEADQL 210
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 152 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 208
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 209 --SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 260
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 124 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 181 --SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 232
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLI------APRIKIAMEIANA 163
+KH NI++L E LVF+ V G L F ++ A +I +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIHQILES 142
Query: 164 VAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPEGETHVREEFIKGAY 220
V ++H IV R +K N+LL + + KL DF L++ + +GE F G
Sbjct: 143 VNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWFGF-AGTP 197
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G+++PE + + D+++ G L LL G
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 124 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 181 --SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 232
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 83 RLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 136
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF + + E E K ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 129 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 185
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 186 --SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 237
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 124 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 181 --SYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 232
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 144 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMT-- 191
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 192 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 246
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIP-EGETHVREEFIK 217
+I YLH ++ R +K N+ L+E+ K+ DF L+ + +GE R++ +
Sbjct: 147 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLC 200
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G +IAPE + + DV+S G + LL G
Sbjct: 201 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 235
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 26/163 (15%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL------RGFSF---ASLLIAP 152
N I ++KH+NI+ L T LV + V G L RG ASL+I
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVI-- 112
Query: 153 RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFSLSVSIPEGET 209
++ +AV YLH + IV R +K N+L +EN + DF LS G
Sbjct: 113 -----QQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164
Query: 210 HVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G G++APE A +++ D +S G LL G
Sbjct: 165 STA----CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 85 RLLGICLTSTV-QLIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 138
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF + + E E K ++A E
Sbjct: 139 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 198 RIYTHQSDVWSYGVTVWELMT 218
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMT-- 185
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 186 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 240
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMT-- 185
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 186 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 240
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIP-EGETHVREEFIK 217
+ V YLH + ++ R +K N+ L+++ K+ DF L+ I +GE R++ +
Sbjct: 134 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKDLC 187
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G +IAPE + D++S G L LL G
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 222
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
+ +A++ +++ ++H R +K N+LLD++ KL DF + + + E VR
Sbjct: 177 VVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRC 226
Query: 214 EFIKGAYGFIAPEYFATSS----FNEMCDVYSFGAFLCELLTG 252
+ G +I+PE + + CD +S G FL E+L G
Sbjct: 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIP-EGETHVREEFIK 217
+I YLH ++ R +K N+ L+E+ K+ DF L+ + +GE R++ +
Sbjct: 149 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLC 202
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G +IAPE + + DV+S G + LL G
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 237
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
+ +A++ +++ ++H R +K N+LLD++ KL DF + + + E VR
Sbjct: 182 VVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRC 231
Query: 214 EFIKGAYGFIAPEYFATSS----FNEMCDVYSFGAFLCELLTG 252
+ G +I+PE + + CD +S G FL E+L G
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMA-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
GF+A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
+ +A++ +++ ++H R +K N+LLD++ KL DF + + + E VR
Sbjct: 182 VVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRC 231
Query: 214 EFIKGAYGFIAPEYFATSS----FNEMCDVYSFGAFLCELLTG 252
+ G +I+PE + + CD +S G FL E+L G
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMA-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
GF+A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIP-EGETHVREEFIK 217
+ V YLH + ++ R +K N+ L+++ K+ DF L+ I +GE R++ +
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKDLC 203
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G +IAPE + D++S G L LL G
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIP-EGETHVREEFIK 217
+I YLH ++ R +K N+ L+E+ K+ DF L+ + +GE R++ +
Sbjct: 123 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLC 176
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G +IAPE + + DV+S G + LL G
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 211
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMT-- 182
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 183 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 237
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMT-- 186
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 187 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 241
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMA-- 176
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
GF+A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 177 --GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 231
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIP-EGETHVREEFIK 217
+I YLH ++ R +K N+ L+E+ K+ DF L+ + +GE R++ +
Sbjct: 125 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLC 178
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G +IAPE + + DV+S G + LL G
Sbjct: 179 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIP-EGETHVREEFIK 217
+I YLH ++ R +K N+ L+E+ K+ DF L+ + +GE R++ +
Sbjct: 125 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLC 178
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G +IAPE + + DV+S G + LL G
Sbjct: 179 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 83 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 136
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF + + E E K ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 40/231 (17%)
Query: 48 KDLKKATNNYDLHKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFS 107
K L K T Y K ++ D+ EGT R IS+MK
Sbjct: 23 KGLNKTTGVYVALKEVKLDSE----EGTPSTAIREISLMK-------------------- 58
Query: 108 SQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR------IK-IAMEI 160
++KH+NI++L TLVFE + + ++ PR +K ++
Sbjct: 59 -ELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 161 ANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAY 220
+A+ H + I+ R +K N+L+++ KL DF L+ + E + Y
Sbjct: 118 LQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWY 174
Query: 221 GFIAPEYFATS-SFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
AP+ S +++ D++S G L E++TG + F G +++ L ++
Sbjct: 175 R--APDVLMGSRTYSTSIDIWSCGCILAEMITGKPL--FPGTNDEEQLKLI 221
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIP-EGETHVREEFIK 217
+I YLH ++ R +K N+ L+E+ K+ DF L+ + +GE R++ +
Sbjct: 129 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLC 182
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G +IAPE + + DV+S G + LL G
Sbjct: 183 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 217
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 88 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 141
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF + + E E K ++A E
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 201 RIYTHQSDVWSYGVTVWELMT 221
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTADEMT-- 187
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 188 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 242
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 24/166 (14%)
Query: 111 KHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIAM--EIANAVAYLH 168
+H NI+ L + + +V E +K G L + R A+ I V YLH
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 169 VGFDRPIVFRCIKASNVL-LDEN---YSAKLHDFSLSVSIPEGETHVREE---FIKGAY- 220
+ +V R +K SN+L +DE+ S ++ DF + +R E + Y
Sbjct: 134 A---QGVVHRDLKPSNILYVDESGNPESIRICDFGFA-------KQLRAENGLLMTPCYT 183
Query: 221 -GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
F+APE ++ CD++S G L +LTG NG DD
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF---ANGPDD 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 69/163 (42%), Gaps = 25/163 (15%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTL------RGF---SFASLLIAP 152
N I ++KH+NI+ L LV + V G L +GF AS LI
Sbjct: 69 NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLI-- 126
Query: 153 RIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFSLSVSIPEGET 209
++ +AV YLH IV R +K N+L DE + DF LS EG+
Sbjct: 127 -----RQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKG 176
Query: 210 HVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
V G G++APE A +++ D +S G LL G
Sbjct: 177 DVMSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTADEMT-- 187
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 188 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 242
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 156 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 203
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 204 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 258
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTADEMT-- 187
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 188 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 242
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 61 KVIQSDTSYRLFEGTLVDQDR----PISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNIL 116
KV+ S +++G + + P+++ + + ++ + + + + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 117 KLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANAVAYLHVG 170
+L+G CL + + L+ + + +G L + + S + + ++IA + YL
Sbjct: 81 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQIAKGMNYLE-- 134
Query: 171 FDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFAT 230
DR +V R + A NVL+ K+ DF + + E E K ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 231 SSFNEMCDVYSFGAFLCELLT 251
+ DV+S+G + EL+T
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 144 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 191
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 192 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 246
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 187
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 188 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 242
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 192
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 193 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 247
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 153 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 200
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 201 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 255
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 182
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 183 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 185
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 186 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 240
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 192
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 193 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 247
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 132 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 179
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 180 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 234
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 192
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 193 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 247
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 153 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 200
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 201 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 255
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 143 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 190
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 191 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 245
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 152 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 199
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 200 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 254
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 182
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 183 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 237
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 186
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 187 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 241
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 182
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 183 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 237
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 152 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 199
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 200 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 254
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI--KIAMEIA 161
I ++KHKNI++L + TLVFE + F + + P I ++
Sbjct: 52 ICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL 111
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ + H R ++ R +K N+L++ N KL DF L+ + E + Y
Sbjct: 112 KGLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYR 168
Query: 222 FIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
P+ F ++ D++S G EL L F GN DD L
Sbjct: 169 --PPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL-FPGNDVDDQL 212
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 185
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 186 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 240
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK- 217
+I +AV Y H IV R +K N+LLDE+ + K+ DF LS + +G F+K
Sbjct: 111 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG------NFLKT 161
Query: 218 --GAYGFIAPEYFATSSF-NEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G+ + APE + + DV+S G L +L C L F +D+ + VL
Sbjct: 162 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML--CRRLPF----DDESIPVL 211
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK- 217
+I +AV Y H IV R +K N+LLDE+ + K+ DF LS + +G F+K
Sbjct: 121 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG------NFLKT 171
Query: 218 --GAYGFIAPEYFATSSF-NEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G+ + APE + + DV+S G L +L C L F +D+ + VL
Sbjct: 172 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML--CRRLPF----DDESIPVL 221
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 186
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 187 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 241
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 130 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 177
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 178 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 232
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 10/171 (5%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-SFASLLIAPRIKIAM 158
I ++ H NI+ LI TLVFE ++ + + L +IKI +
Sbjct: 66 AIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYL 125
Query: 159 -EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
++ VA+ H I+ R +K N+L++ + + KL DF L+ + E +
Sbjct: 126 YQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVT 182
Query: 218 GAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
Y AP+ S ++ D++S G E++TG + F G +DD L
Sbjct: 183 LWYR--APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL--FPGVTDDDQL 229
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK- 217
+I +AV Y H IV R +K N+LLDE+ + K+ DF LS + +G F+K
Sbjct: 120 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG------NFLKT 170
Query: 218 --GAYGFIAPEYFATSSF-NEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G+ + APE + + DV+S G L +L C L F +D+ + VL
Sbjct: 171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML--CRRLPF----DDESIPVL 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 176
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 177 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 231
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 158 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 215 --SXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 266
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 10/171 (5%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF-SFASLLIAPRIKIAM 158
I ++ H NI+ LI TLVFE ++ + + L +IKI +
Sbjct: 66 AIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYL 125
Query: 159 -EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
++ VA+ H I+ R +K N+L++ + + KL DF L+ + E +
Sbjct: 126 YQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVT 182
Query: 218 GAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
Y AP+ S ++ D++S G E++TG + F G +DD L
Sbjct: 183 LWYR--APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL--FPGVTDDDQL 229
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 130 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 177
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 178 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 232
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK- 217
+I +AV Y H IV R +K N+LLDE+ + K+ DF LS + +G F+K
Sbjct: 115 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG------NFLKT 165
Query: 218 --GAYGFIAPEYFATSSF-NEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G+ + APE + + DV+S G L +L C L F +D+ + VL
Sbjct: 166 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML--CRRLPF----DDESIPVL 215
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 136 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 192
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 193 --SXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 244
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 131 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 178
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 179 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 233
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 186
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 187 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 241
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 176
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 177 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 231
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 143 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 199
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 200 --SXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 251
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 156 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMX-- 203
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 204 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 258
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 132 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 188
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 189 --SXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 240
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 124 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 181 --SXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 232
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLC-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 176
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 177 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 231
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 124 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 181 --SXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 125 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 181
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 182 --SXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 233
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 136 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 192
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 193 --SXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 244
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 128 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 184
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 185 --SXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 236
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 124 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 181 --SXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 232
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGF 222
+ YLH F R I R IKA N+LL+ AKL DF ++ + + + + G +
Sbjct: 137 GLEYLH--FMRKI-HRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFW 191
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+APE +N + D++S G E+ G
Sbjct: 192 MAPEVIQEIGYNCVADIWSLGITAIEMAEG 221
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLI------APRIKIAMEIANA 163
+KH NI++L E LVF+ V G L F ++ A +I A
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEA 115
Query: 164 VAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPEGETHVREEFIKGAY 220
V + H +V R +K N+LL + + KL DF L++ + +G+ F G
Sbjct: 116 VLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGDQQAWFGF-AGTP 170
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G+++PE ++ + D+++ G L LL G
Sbjct: 171 GYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 79 QDRPISVM---KFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESV 135
Q++ SV+ K D + +++E I + H NI+KL+ ++ E
Sbjct: 30 QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 89
Query: 136 KYGTLRG--FSFASLLIAPRIKIA-MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYS 192
G + L +I++ + +A+ YLH D I+ R +KA N+L +
Sbjct: 90 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGD 146
Query: 193 AKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSS-----FNEMCDVYSFGAFLC 247
KL DF +S R+ FI Y ++APE + ++ DV+S G L
Sbjct: 147 IKLADFGVSAKNTRTXIQRRDSFIGTPY-WMAPEVVMCETSKDRPYDYKADVWSLGITLI 205
Query: 248 EL 249
E+
Sbjct: 206 EM 207
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLI------APRIKIAMEIANA 163
+KH NI++L E L+F+ V G L F ++ A +I A
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEA 133
Query: 164 VAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPEGETHVREEFIKGAY 220
V + H +V R +K N+LL + + KL DF L++ + EGE F G
Sbjct: 134 VLHCH---QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGF-AGTP 188
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G+++PE + + D+++ G L LL G
Sbjct: 189 GYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHV 211
+K+ M ++ ++AY+H F I R IK N+LLD + + KL DF + + GE +V
Sbjct: 124 VKLYMYQLFRSLAYIH-SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 212 REEFIKGAYGFIAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
I Y + APE F + + DV+S G L ELL G + F G+ D L
Sbjct: 181 --SXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI--FPGDSGVDQL 232
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 34/238 (14%)
Query: 97 VEYCFNNIVFSSQMKHKNILKLIGCCLETELPTL--VFESVKYGTLRGFSFASLLIAPRI 154
+E + I ++ H N++KL+ + L VFE V G + L +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 155 KIAME-IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
+ + + + YLH + I+ R IK SN+L+ E+ K+ DF +S + +
Sbjct: 140 RFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN 196
Query: 214 EFIKGAYGFIAPEYFATSS---FNEMCDVYSFGAFL-CELLTGCNVLEFKGNGNDDDLTV 269
G F+APE + + + DV++ G L C + C + D+ +
Sbjct: 197 TV--GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM-------DERIMC 247
Query: 270 LEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDV 327
L KS + FP + + + L L+ + L K+PE R ++ ++
Sbjct: 248 LHSKIKS---------------QALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI 290
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLI------APRIKIAMEIANA 163
+KH NI++L E L+F+ V G L F ++ A +I A
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEA 122
Query: 164 VAYLHVGFDRPIVFRCIKASNVLLD---ENYSAKLHDFSLSVSIPEGETHVREEFIKGAY 220
V + H +V R +K N+LL + + KL DF L++ + EGE F G
Sbjct: 123 VLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGF-AGTP 177
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G+++PE + + D+++ G L LL G
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLI------APRIKIAMEIANA 163
+KH NI++L E LVF+ V G L F ++ A +I +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILES 115
Query: 164 VAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFSLSVSIPEGETHVREEFIKGAY 220
V + H+ IV R +K N+LL + + KL DF L++ + +G+ F G
Sbjct: 116 VNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFGF-AGTP 170
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G+++PE + + D+++ G L LL G
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
K+++ + +AYL I+ R +K SN+L++ KL DF +S + + +
Sbjct: 118 KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 172
Query: 215 FIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
F+ G ++APE + ++ D++S G L EL G
Sbjct: 173 FV-GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLI------APRIKIAMEIANA 163
+KH NI++L E LVF+ V G L F ++ A +I +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILES 115
Query: 164 VAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFSLSVSIPEGETHVREEFIKGAY 220
V + H+ IV R +K N+LL + + KL DF L++ + +G+ F G
Sbjct: 116 VNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFGF-AGTP 170
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G+++PE + + D+++ G L LL G
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPE-GETHVREEFIKGAYGFIAPEYFATSS- 232
++ R +K N+LLD++ KL DF + + E G H + G +I+PE +
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHC--DTAVGTPDYISPEVLKSQGG 252
Query: 233 ---FNEMCDVYSFGAFLCELLTG 252
+ CD +S G FL E+L G
Sbjct: 253 DGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ D+ L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTL---------RGFSFASLLIAPRIKIAMEI 160
+ H NI+K+ + +V E+ + G L RG + + +A +K M
Sbjct: 77 LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM-- 134
Query: 161 ANAVAYLHVGFDRPIVFRCIKASNVLLDE---NYSAKLHDFSLSVSIPEGETHVREEFIK 217
NA+AY H + +V + +K N+L + + K+ DF L+ E +E
Sbjct: 135 -NALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA------ELFKSDEHST 184
Query: 218 GAYG---FIAPEYFATS-SFNEMCDVYSFGAFLCELLTGCNVLEFKGN 261
A G ++APE F +F CD++S G + LLTGC L F G
Sbjct: 185 NAAGTALYMAPEVFKRDVTFK--CDIWSAGVVMYFLLTGC--LPFTGT 228
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFSLSVSIPEGETHVR 212
I ++ +AV+++H D +V R +K N+L ++N K+ DF + P ++
Sbjct: 111 IMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y APE + ++E CD++S G L +L+G
Sbjct: 168 TPCFTLHYA--APELLNQNGYDESCDLWSLGVILYTMLSG 205
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE----- 208
+ I ++IA AV +LH + ++ R +K SN+ + K+ DF L ++ + E
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 209 -----THVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELL 250
+ R G +++PE +S++ D++S G L ELL
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK- 217
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGX 182
Query: 218 -GAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
+ APE +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK- 217
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 153 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGX 202
Query: 218 -GAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
+ APE +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 255
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 70/180 (38%), Gaps = 30/180 (16%)
Query: 83 ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRG 142
I M + + + + + F +++H N ++ GC L LV E
Sbjct: 84 IKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC------- 136
Query: 143 FSFASLLIAPRIKIAMEIANA---------VAYLHVGFDRPIVFRCIKASNVLLDENYSA 193
AS L+ K E+ A +AYLH ++ R +KA N+LL E
Sbjct: 137 LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLV 193
Query: 194 KLHDF-SLSVSIPEGETHVREEFIKGAYGFIAPEYFAT---SSFNEMCDVYSFGAFLCEL 249
KL DF S S+ P F+ Y ++APE ++ DV+S G EL
Sbjct: 194 KLGDFGSASIMAPAN------XFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+++D+ K+ DF L+ + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVL-LDEN---YSAKLHDFSLSVSIPEGETHV 211
+ I V YLH + +V R +K SN+L +DE+ S ++ DF + + E +
Sbjct: 121 VLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGL 176
Query: 212 REEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDD 265
A F+APE ++ CD++S G L LTG NG DD
Sbjct: 177 LXTPCYTA-NFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF---ANGPDD 226
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 70/180 (38%), Gaps = 30/180 (16%)
Query: 83 ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRG 142
I M + + + + + F +++H N ++ GC L LV E
Sbjct: 45 IKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC------- 97
Query: 143 FSFASLLIAPRIKIAMEIANA---------VAYLHVGFDRPIVFRCIKASNVLLDENYSA 193
AS L+ K E+ A +AYLH ++ R +KA N+LL E
Sbjct: 98 LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLV 154
Query: 194 KLHDF-SLSVSIPEGETHVREEFIKGAYGFIAPEYFAT---SSFNEMCDVYSFGAFLCEL 249
KL DF S S+ P F+ Y ++APE ++ DV+S G EL
Sbjct: 155 KLGDFGSASIMAPAN------XFVGTPY-WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 28/161 (17%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI------KIA 157
I + ++H +I+KL PT + ++Y G F ++ R+ +
Sbjct: 60 ISYLKLLRHPHIIKLYDV---ITTPTDIVMVIEYAG--GELFDYIVEKKRMTEDEGRRFF 114
Query: 158 MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
+I A+ Y H IV R +K N+LLD+N + K+ DF LS + +G F+K
Sbjct: 115 QQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG------NFLK 165
Query: 218 GAYGFIAPEYFATSSFN------EMCDVYSFGAFLCELLTG 252
+ G +P Y A N DV+S G L +L G
Sbjct: 166 TSCG--SPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVG 204
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ K+ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWX----L 199
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ K+ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ K+ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/290 (18%), Positives = 109/290 (37%), Gaps = 62/290 (21%)
Query: 71 LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTL 130
LF +Q + +++ D + E + + ++++H N++ L+G + + ++
Sbjct: 30 LFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 89
Query: 131 VFESVKYGTLRGF-----------------SFASLLIAPR-IKIAMEIANAVAYLHVGFD 172
+F +G L F + S L P + + +IA + YL
Sbjct: 90 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---S 146
Query: 173 RPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG----------F 222
+V + + NVL+ + + K+ D L RE + Y +
Sbjct: 147 HHVVHKDLATRNVLVYDKLNVKISDLGL----------FREVYAADYYKLLGNSLLPIRW 196
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRF 282
+APE F+ D++S+G L E+ + + + G N D + ++ NR
Sbjct: 197 MAPEAIMYGKFSIDSDIWSYGVVLWEVFS-YGLQPYCGYSNQDVVEMI--------RNR- 246
Query: 283 GAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLR 332
P ++ + LM +C ++ P RP D+ +LR
Sbjct: 247 -----------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+DE ++ DF + + +G T +
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV-KGRTWX----L 185
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 186 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ K+ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/290 (18%), Positives = 109/290 (37%), Gaps = 62/290 (21%)
Query: 71 LFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTL 130
LF +Q + +++ D + E + + ++++H N++ L+G + + ++
Sbjct: 47 LFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106
Query: 131 VFESVKYGTLRGF-----------------SFASLLIAPR-IKIAMEIANAVAYLHVGFD 172
+F +G L F + S L P + + +IA + YL
Sbjct: 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---S 163
Query: 173 RPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG----------F 222
+V + + NVL+ + + K+ D L RE + Y +
Sbjct: 164 HHVVHKDLATRNVLVYDKLNVKISDLGL----------FREVYAADYYKLLGNSLLPIRW 213
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENNRF 282
+APE F+ D++S+G L E+ + + + G N D + ++ NR
Sbjct: 214 MAPEAIMYGKFSIDSDIWSYGVVLWEVFS-YGLQPYCGYSNQDVVEMI--------RNR- 263
Query: 283 GAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEHRPLMVDVAKQLR 332
P ++ + LM +C ++ P RP D+ +LR
Sbjct: 264 -----------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 158 MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
++I A+ ++H DR I+ R IK+ N+ L ++ + +L DF ++ + + I
Sbjct: 132 VQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIA-RVLNSTVELARACIG 187
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
Y +++PE +N D+++ G L EL T
Sbjct: 188 TPY-YLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
K+++ + + YL I+ R +K SN+L++ KL DF +S + + + E
Sbjct: 111 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---EMANE 165
Query: 215 FIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
F+ G +++PE + ++ D++S G L E+ G
Sbjct: 166 FV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 112 HKNILKLIGCCLETELPTLVFESVKYGTLRGF-------------------------SFA 146
H+NI+ L+G C + L+FE YG L +
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 147 SLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPE 206
L + A ++A + +L + V R + A NVL+ K+ DF L+ I
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 207 GETHVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+V + ++APE + DV+S+G L E+ +
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTL---------RGFSFASLLIAPRIKIAMEI 160
+KH +I++L+ + +VFE + L GF ++ + + ++ +I
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR---QI 139
Query: 161 ANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFSLSVSIPEGETHVREEFIK 217
A+ Y H D I+ R +K VLL + + KL F +++ + GE+ +
Sbjct: 140 LEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRV 194
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGN 261
G F+APE + + DV+ G L LL+GC L F G
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGC--LPFYGT 236
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 39/227 (17%)
Query: 61 KVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKL-- 118
KVI + + +F+ LV+ D +++ K + + E IV KH N++ L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIV-----KHPNVVDLKA 99
Query: 119 -------------IGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIAM-EIANAV 164
+ LE T+ S Y L+ + LLI K+ M ++ ++
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQ-TMPMLLI----KLYMYQLLRSL 154
Query: 165 AYLH-VGFDRPIVFRCIKASNVLLDENYSA-KLHDFSLSVSIPEGETHVREEFIKGAYGF 222
AY+H +G I R IK N+LLD KL DF + + GE +V I Y +
Sbjct: 155 AYIHSIG----ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV--SXICSRY-Y 207
Query: 223 IAPEY-FATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLT 268
APE F +++ D++S G + EL+ G + F G D L
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPL--FPGESGIDQLV 252
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 9/167 (5%)
Query: 104 IVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI--KIAMEIA 161
I ++KHKNI++L + TLVFE + F + + P I ++
Sbjct: 52 ICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL 111
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ + H R ++ R +K N+L++ N KL +F L+ + E + Y
Sbjct: 112 KGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYR 168
Query: 222 FIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
P+ F ++ D++S G EL L F GN DD L
Sbjct: 169 --PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL-FPGNDVDDQL 212
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ F L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTL---------RGFSFASLLIAPRIKIAMEI 160
+KH +I++L+ + +VFE + L GF ++ + + ++ +I
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR---QI 141
Query: 161 ANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFSLSVSIPEGETHVREEFIK 217
A+ Y H D I+ R +K VLL + + KL F +++ + GE+ +
Sbjct: 142 LEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRV 196
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGN 261
G F+APE + + DV+ G L LL+GC L F G
Sbjct: 197 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGC--LPFYGT 238
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE V + L+ F AS L P IK
Sbjct: 48 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKS 106
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 107 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 163
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 164 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 212
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ D L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+++D+ ++ DF L+ + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYS-AKLHDFSLSVSI-PEG--ETHVREEFIK 217
+ YLH R I+ +KA NVLL + S A L DF +V + P+G ++ + ++I
Sbjct: 196 EGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP 252
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
G +APE S + DV+S + +L GC+
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCH 289
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVL-LDENYSA---KLHDFSLSVSIPEGETHVREE- 214
I V YLH + +V R +K SN+L +DE+ + ++ DF + +R E
Sbjct: 130 IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFA-------KQLRAEN 179
Query: 215 --FIKGAY--GFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+ Y F+APE ++E CD++S G L +L G
Sbjct: 180 GLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+++D+ K+ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+++D+ K+ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWX----L 199
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+++D+ K+ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWX----L 199
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 133 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWT----L 184
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ D L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+++D+ K+ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWX----L 199
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+++D+ K+ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+++D+ K+ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWX----L 199
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWT----L 199
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 23/119 (19%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ D L+ H +E
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLA-------RHTDDEMT-- 180
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
G++A ++ +N+ D++S G + ELLTG + F G + D L ++
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL--FPGTDHIDQLKLI 235
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 193
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 194 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 191
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 191
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGATWT----L 219
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVL-LDENYSA---KLHDFSLSVSIPEGETHVREE- 214
I V YLH + +V R +K SN+L +DE+ + ++ DF + +R E
Sbjct: 130 IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFA-------KQLRAEN 179
Query: 215 --FIKGAY--GFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+ Y F+APE ++E CD++S G L +L G
Sbjct: 180 GLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 219
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 199
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 23/163 (14%)
Query: 106 FSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR---IKIAMEIAN 162
+++ ++ +N +K + + + E + GTL + L R ++ +I
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL--------------SVSIPEGE 208
A++Y+H + I+ R +K N+ +DE+ + K+ DF L S ++P
Sbjct: 128 ALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 209 THVREEFIKGAYGFIAPEYF-ATSSFNEMCDVYSFGAFLCELL 250
++ G ++A E T +NE D+YS G E++
Sbjct: 185 DNLTSAI--GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 199
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 219
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELLTG 252
E D++S G + E++ G
Sbjct: 204 ENVDIWSVGVIMGEMIKG 221
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 199
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + + ++ Y + APE +
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLART--ASTNFMMTPYVVTRY-YRAPEVILGMGYK 201
Query: 235 EMCDVYSFGAFLCELLTGC-------------NVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + EL+ G V+E G + + + L+ ++ NR
Sbjct: 202 ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 261
Query: 282 FGAIVDPIFDE---DNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
A F+E D FP + E K L+ K L P+ R + V + LR
Sbjct: 262 -PAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKR---ISVDEALRHP 317
Query: 335 YLSV 338
Y++V
Sbjct: 318 YITV 321
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 199
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 199
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 199
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELLTG 252
E D++S G + E++ G
Sbjct: 204 ENVDIWSVGVIMGEMIKG 221
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
IA++ + + Y+H R IK N+L+D N +L DF + + E T V+
Sbjct: 186 IAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSV 235
Query: 216 IKGAYGFIAPEYF-----ATSSFNEMCDVYSFGAFLCELLTG 252
G +I+PE + CD +S G + E+L G
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 23/120 (19%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ + Y+H +V R +K N+ ++E+ K+ DF L+ H E
Sbjct: 131 LVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA-------RHADAEM 180
Query: 216 IKGAYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLT 268
G++ ++ +N+ D++S G + E+LTG + FKG D LT
Sbjct: 181 T----GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL--FKGKDYLDQLT 234
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 23/120 (19%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ + Y+H +V R +K N+ ++E+ K+ DF L+ H E
Sbjct: 149 LVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA-------RHADAEM 198
Query: 216 IKGAYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLT 268
G++ ++ +N+ D++S G + E+LTG + FKG D LT
Sbjct: 199 T----GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL--FKGKDYLDQLT 252
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
K+++ + + YL I+ R +K SN+L++ KL DF +S + + +
Sbjct: 127 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 181
Query: 215 FIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
F+ G +++PE + ++ D++S G L E+ G
Sbjct: 182 FV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIAMEIA 161
+V + + I+ L G E + E ++ G+L G + P + +
Sbjct: 113 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLG 171
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYS-AKLHDFSLSVSI-PEG--ETHVREEFIK 217
A+ L R I+ +KA NVLL + S A L DF ++ + P+G ++ + ++I
Sbjct: 172 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
G +APE + D++S + +L GC+
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCH 268
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYS-AKLHDFSLSVSI-PEG--ETHVREEFIK 217
+ YLH R I+ +KA NVLL + S A L DF +V + P+G + + ++I
Sbjct: 177 EGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP 233
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
G +APE S + DV+S + +L GC+
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCH 270
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--ACTNFMMTPYVVTRY-YRAPEVILGMGYA 203
Query: 235 EMCDVYSFGAFLCELLTGC-------------NVLEFKGNGNDDDLTVLEYAKKSIENNR 281
D++S G + EL+ GC V+E G + + + L+ ++ NR
Sbjct: 204 ANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 263
Query: 282 ---FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQM 334
G + +F D FP + E K L+ K L P+ R + V + LR
Sbjct: 264 PKYPGIKFEELF-PDWIFPSESERDKIKTSQARDLLSKMLVIDPDKR---ISVDEALRHP 319
Query: 335 YLSV 338
Y++V
Sbjct: 320 YITV 323
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIAMEIA 161
+V + + I+ L G E + E ++ G+L G + P + +
Sbjct: 99 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLG 157
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYS-AKLHDFSLSVSI-PEG--ETHVREEFIK 217
A+ L R I+ +KA NVLL + S A L DF ++ + P+G ++ + ++I
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
G +APE + D++S + +L GC+
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCH 254
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ + Y+H I+ R +K SNV ++E+ ++ DF L+ E T
Sbjct: 136 LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT------ 186
Query: 216 IKGAYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
G++A ++ +N+ D++S G + ELL G + F G+ D L
Sbjct: 187 -----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL--FPGSDYIDQL 238
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 16/182 (8%)
Query: 79 QDRPISVM---KFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESV 135
Q++ SV+ K D + +++E I + H NI+KL+ ++ E
Sbjct: 57 QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 116
Query: 136 KYGTLRG--FSFASLLIAPRIKIA-MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYS 192
G + L +I++ + +A+ YLH D I+ R +KA N+L +
Sbjct: 117 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGD 173
Query: 193 AKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSS-----FNEMCDVYSFGAFLC 247
KL DF +S R+ FI Y ++APE + ++ DV+S G L
Sbjct: 174 IKLADFGVSAKNTRT-IQRRDSFIGTPY-WMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 248 EL 249
E+
Sbjct: 232 EM 233
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 21/101 (20%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+I + Y+H I+ R +K SN+ ++E+ K+ DF L+ H +E
Sbjct: 162 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMT-- 209
Query: 219 AYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTG 252
G++A ++ +N D++S G + ELLTG
Sbjct: 210 --GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE V L+ F AS L P IK
Sbjct: 52 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKS 110
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 111 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 168 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 216
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Query: 102 NNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRIKIAMEIA 161
+V + + I+ L G E + E ++ G+L G + P + +
Sbjct: 115 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLG 173
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYS-AKLHDFSLSVSI-PEG--ETHVREEFIK 217
A+ L R I+ +KA NVLL + S A L DF ++ + P+G ++ + ++I
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 218 GAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
G +APE + D++S + +L GC+
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCH 270
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 16/182 (8%)
Query: 79 QDRPISVM---KFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESV 135
Q++ SV+ K D + +++E I + H NI+KL+ ++ E
Sbjct: 57 QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 116
Query: 136 KYGTLRG--FSFASLLIAPRIKIA-MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYS 192
G + L +I++ + +A+ YLH D I+ R +KA N+L +
Sbjct: 117 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGD 173
Query: 193 AKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSS-----FNEMCDVYSFGAFLC 247
KL DF +S R+ FI Y ++APE + ++ DV+S G L
Sbjct: 174 IKLADFGVSAKNTR-XIQRRDXFIGTPY-WMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 248 EL 249
E+
Sbjct: 232 EM 233
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ + Y+H I+ R +K SNV ++E+ ++ DF L+ E T
Sbjct: 136 LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT------ 186
Query: 216 IKGAYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
G++A ++ +N+ D++S G + ELL G + F G+ D L
Sbjct: 187 -----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL--FPGSDYIDQL 238
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
K+++ + + YL I+ R +K SN+L++ KL DF +S + + +
Sbjct: 135 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 189
Query: 215 FIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
F+ G +++PE + ++ D++S G L E+ G
Sbjct: 190 FV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 16/182 (8%)
Query: 79 QDRPISVM---KFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESV 135
Q++ SV+ K D + +++E I + H NI+KL+ ++ E
Sbjct: 57 QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 116
Query: 136 KYGTLRG--FSFASLLIAPRIKIA-MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYS 192
G + L +I++ + +A+ YLH D I+ R +KA N+L +
Sbjct: 117 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGD 173
Query: 193 AKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSS-----FNEMCDVYSFGAFLC 247
KL DF +S R+ FI Y ++APE + ++ DV+S G L
Sbjct: 174 IKLADFGVSAKNTR-XIQRRDSFIGTPY-WMAPEVVMCETSKDRPYDYKADVWSLGITLI 231
Query: 248 EL 249
E+
Sbjct: 232 EM 233
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+++D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELLTG 252
E D++S G + E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + F+ Y + APE +
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRY-YRAPEVILGMGYK 205
Query: 235 EMCDVYSFGAFLCELLTG 252
E D++S G + E++ G
Sbjct: 206 ENVDIWSVGCIMGEMIKG 223
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 107
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 165 VTLWYR--APEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 213
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELLTG 252
E D++S G + E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+++D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
K+++ + + YL I+ R +K SN+L++ KL DF +S + + +
Sbjct: 170 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 224
Query: 215 FIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
F+ G +++PE + ++ D++S G L E+ G
Sbjct: 225 FV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSI---------PEGETHVREEFIKGAYGFIAP 225
++ R +K SN+L++ N K+ DF L+ I P G+ EF+ + + AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW-YRAP 191
Query: 226 EYFATSS-FNEMCDVYSFGAFLCELL 250
E TS+ ++ DV+S G L EL
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELLTG 252
E D++S G + E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ + Y+H I+ R +K SNV ++E+ ++ DF L+ E T
Sbjct: 128 LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT------ 178
Query: 216 IKGAYGFIAPEYFATSS-------FNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
G++A ++ +N+ D++S G + ELL G + F G+ D L
Sbjct: 179 -----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL--FPGSDYIDQL 230
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
+ I ++IA AV +LH + ++ R +K SN+ + K+ DF L ++ + E
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 214 EFIKGAYG----------FIAPEYFATSSFNEMCDVYSFGAFLCELL 250
AY +++PE ++++ D++S G L ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL--------------SVSI 204
+I A++Y+H + I+ R +K N+ +DE+ + K+ DF L S ++
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 205 PEGETHVREEFIKGAYGFIAPEYF-ATSSFNEMCDVYSFGAFLCELL 250
P ++ G ++A E T +NE D+YS G E++
Sbjct: 181 PGSSDNLTSAI--GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 176 VFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYF-----AT 230
V R IK NVLLD N +L DF + + + T V+ G +I+PE
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAMEDGM 255
Query: 231 SSFNEMCDVYSFGAFLCELLTG 252
+ CD +S G + E+L G
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYG 277
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++APE + +N+ D ++ G + ++ G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
K+++ + + YL I+ R +K SN+L++ KL DF +S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 215 FIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
F+ G +++PE + ++ D++S G L E+ G
Sbjct: 163 FV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 176 VFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYF-----AT 230
V R IK NVLLD N +L DF + + + T V+ G +I+PE
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAMEDGM 271
Query: 231 SSFNEMCDVYSFGAFLCELLTG 252
+ CD +S G + E+L G
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYG 293
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 56 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 114
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 115 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 171
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 172 VTLWYR--APEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 220
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 53 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 111
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 112 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 168
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 169 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 217
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 107
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 165 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 213
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
K+++ + + YL I+ R +K SN+L++ KL DF +S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 215 FIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
F+ G +++PE + ++ D++S G L E+ G
Sbjct: 163 FV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
K+++ + + YL I+ R +K SN+L++ KL DF +S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 215 FIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
F+ G +++PE + ++ D++S G L E+ G
Sbjct: 163 FV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
K+++ + + YL I+ R +K SN+L++ KL DF +S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 215 FIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
F+ G +++PE + ++ D++S G L E+ G
Sbjct: 163 FV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSI---------PEGETHVREEFIKGAYGFIAP 225
++ R +K SN+L++ N K+ DF L+ I P G+ E++ + + AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRW-YRAP 191
Query: 226 EYFATSS-FNEMCDVYSFGAFLCELL 250
E TS+ ++ DV+S G L EL
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 48 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 106
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 107 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 163
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 164 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 212
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 50 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 108
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 109 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 166 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 214
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 107
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 165 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 213
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 50 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 108
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 109 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 165
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 166 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 214
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 107
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 165 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 213
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 48 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 106
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 107 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 163
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 164 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 212
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 107
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 165 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 213
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 48 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 106
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 107 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 163
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 164 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 212
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
K+++ + + YL I+ R +K SN+L++ KL DF +S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 162
Query: 215 FIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
F+ G +++PE + ++ D++S G L E+ G
Sbjct: 163 FV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 107
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 165 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 213
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 107
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 165 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 213
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 53 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 111
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 112 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 168
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 169 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 217
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 52 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 110
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 111 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 168 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 216
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 51 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 109
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 110 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 167 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 215
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELLTG 252
E D++S G + E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELLTG 252
E D++S G + E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 48 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 106
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 107 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 163
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 164 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 212
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 48 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 106
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 107 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 163
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 164 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 212
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELLTG 252
E D++S G + E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 52 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 110
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 111 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 168 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 216
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 51 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 109
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 110 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 167 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 215
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 52 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKS 110
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 111 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 168 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 216
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKS 107
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 165 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 213
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 50 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 108
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 109 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 166 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 214
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 132 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 189 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 204
Query: 235 EMCDVYSFGAFLCELLTG 252
E D++S G + E++ G
Sbjct: 205 ENVDIWSVGCIMGEMIKG 222
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 56 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 114
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 115 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 171
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 172 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 220
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 107
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 108 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 165 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 213
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
KIA+ I A+ +LH ++ R +K SNVL++ K+ DF +S + + V ++
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD---DVAKD 167
Query: 215 FIKGAYGFIAPEY----FATSSFNEMCDVYSFGAFLCEL 249
G ++APE ++ D++S G + EL
Sbjct: 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 50 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 108
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 109 YLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 166 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 214
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 13/103 (12%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDE---NYSAKLHDFSLSVSIPEGETHV 211
+I I A+ YLH I R +K N+L N KL DF + ET
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTS 170
Query: 212 REEFIKGAYG--FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+ Y ++APE +++ CD++S G + LL G
Sbjct: 171 HNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 51 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 109
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 110 YLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 167 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 10/173 (5%)
Query: 101 FNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI--KIAM 158
I Q+KH N++ L+ LVFE + L + + I
Sbjct: 50 LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW 109
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKG 218
+ AV + H + R +K N+L+ ++ KL DF + + + +E
Sbjct: 110 QTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR 166
Query: 219 AYGFIAPEYF-ATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
Y +PE + + DV++ G ELL+G + + G + D L ++
Sbjct: 167 WYR--SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPL--WPGKSDVDQLYLI 215
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
KIA+ I A+ +LH ++ R +K SNVL++ K+ DF +S + + V +
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS---VAKT 211
Query: 215 FIKGAYGFIAPEY----FATSSFNEMCDVYSFGAFLCEL 249
G ++APE ++ D++S G + EL
Sbjct: 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H NI+ L L+ E V G L F SL + +I + V Y
Sbjct: 85 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 144
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENY---SAKLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH + I +K N+ LLD+N KL DF ++ I G EF I G
Sbjct: 145 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN-----EFKNIFGTP 196
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLT 268
F+APE D++S G LL+G + F G + LT
Sbjct: 197 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS--PFLGETKQETLT 242
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDE---NYSAKLHDFSLSVSIPEGETHV 211
+I I A+ YLH I R +K N+L N KL DF + ET
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTS 222
Query: 212 REEFIKGAYG--FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE +++ CD++S G + LL G
Sbjct: 223 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H NI+ L L+ E V G L F SL + +I + V Y
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 130
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENY---SAKLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH + I +K N+ LLD+N KL DF ++ I G EF I G
Sbjct: 131 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN-----EFKNIFGTP 182
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLT 268
F+APE D++S G LL+G + F G + LT
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS--PFLGETKQETLT 228
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDE---NYSAKLHDFSLSVSIPEGETHV 211
+I I A+ YLH I R +K N+L N KL DF + ET
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTS 216
Query: 212 REEFIKGAYG--FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE +++ CD++S G + LL G
Sbjct: 217 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-------------- 200
++ +I A++Y+H + I+ R +K N+ +DE+ + K+ DF L
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 201 SVSIPEGETHVREEFIKGAYGFIAPEYF-ATSSFNEMCDVYSFGAFLCELL 250
S ++P ++ G ++A E T +NE D YS G E +
Sbjct: 177 SQNLPGSSDNLTSAI--GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G +APE + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 196
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 256
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 257 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 313
Query: 336 LSV 338
++V
Sbjct: 314 INV 316
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H NI+ L L+ E V G L F SL + +I + V Y
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 123
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENY---SAKLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH + I +K N+ LLD+N KL DF ++ I G EF I G
Sbjct: 124 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN-----EFKNIFGTP 175
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLT 268
F+APE D++S G LL+G + F G + LT
Sbjct: 176 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS--PFLGETKQETLT 221
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 12/152 (7%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
Q+ H N++ L L+ E V G L F SL +I + V Y
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEFIKGAYGF 222
LH + I +K N+ LLD+N KL DF L+ I +G V + I G F
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEF 184
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
+APE D++S G LL+G +
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 320
Query: 336 LSV 338
++V
Sbjct: 321 INV 323
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDE---NYSAKLHDFSLSVSIPEGETHV 211
+I I A+ YLH I R +K N+L N KL DF + ET
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTS 172
Query: 212 REEFIKGAYG--FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE +++ CD++S G + LL G
Sbjct: 173 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + L+ F AS L P IK
Sbjct: 51 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKS 109
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 110 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 167 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 215
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 320
Query: 336 LSV 338
++V
Sbjct: 321 INV 323
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 320
Query: 336 LSV 338
++V
Sbjct: 321 INV 323
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPRI--------KIAMEI 160
Q +H+N++ +G C+ P L ++ +G + S++ +I +IA EI
Sbjct: 85 QTRHENVVLFMGACMSP--PHL---AIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 139
Query: 161 ANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHD---FSLSVSIPEGETHVREEFIK 217
+ YLH + I+ + +K+ NV D N + D FS+S + G +
Sbjct: 140 VKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQN 195
Query: 218 GAYGFIAPEYFATSS---------FNEMCDVYSFGAFLCEL 249
G +APE S F++ DV++ G EL
Sbjct: 196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 111 KHKNILKLIGCCLETELP-----TLVFESVKYGTLRGF---SFASLLIAPRIKIAM-EIA 161
+H N+++L+ C + TLVFE V LR + + L A IK M +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ +LH IV R +K N+L+ + KL DF L+ + + +
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVVTLW 176
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ APE S++ D++S G E+ + F GN D L
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL--FCGNSEADQL 220
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 320
Query: 336 LSV 338
++V
Sbjct: 321 INV 323
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 12/152 (7%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
Q+ H N++ L L+ E V G L F SL +I + V Y
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEFIKGAYGF 222
LH + I +K N+ LLD+N KL DF L+ I +G V + I G F
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEF 184
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
+APE D++S G LL+G +
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + L+ F AS L P IK
Sbjct: 52 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKS 110
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 111 YLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 168 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 216
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 157 AMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFI 216
A +I YLH +++R +K N+L+D+ ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWX----L 198
Query: 217 KGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
G ++AP + +N+ D ++ G + E+ G
Sbjct: 199 CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDE---NYSAKLHDFSLSVSIPEGETHV 211
+I I A+ YLH I R +K N+L N KL DF + ET
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTS 178
Query: 212 REEFIKGAYG--FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE +++ CD++S G + LL G
Sbjct: 179 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 110 MKHKNILKLIGC-----CLETELPTLVFESVKYGTLRGF-SFASLLIAPRIKIAMEIANA 163
++H+NIL I T+L LV + ++G+L + + ++ + IK+A+ A+
Sbjct: 93 LRHENILGFIAADNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 151
Query: 164 VAYLH---VGFD-RP-IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEG--ETHVREEFI 216
+A+LH VG +P I R +K+ N+L+ +N + + D L+V +
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 211
Query: 217 KGAYGFIAPEYFATS-------SFNEMCDVYSFGAFLCELLTGCNV 255
G ++APE S SF D+Y+ G E+ C++
Sbjct: 212 VGTKRYMAPEVLDDSINMKHFESFKR-ADIYAMGLVFWEIARRCSI 256
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDE---NYSAKLHDFSLSVSIPEGETHV 211
+I I A+ YLH I R +K N+L N KL DF + ET
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTS 170
Query: 212 REEFIKGAYG--FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE +++ CD++S G + LL G
Sbjct: 171 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDE---NYSAKLHDFSLSVSIPEGETHV 211
+I I A+ YLH I R +K N+L N KL DF + ET
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTS 177
Query: 212 REEFIKGAYG--FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE +++ CD++S G + LL G
Sbjct: 178 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 62/152 (40%), Gaps = 12/152 (7%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
Q+ H NI+ L L+ E V G L F SL +I + V Y
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEFIKGAYGF 222
LH + I +K N+ LLD+N KL DF L+ I +G V + I G F
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEF 184
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
+APE D++S G LL+G +
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDE---NYSAKLHDFSLSVSIPEGETHV 211
+I I A+ YLH I R +K N+L N KL DF + ET
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTS 176
Query: 212 REEFIKGAYG--FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE +++ CD++S G + LL G
Sbjct: 177 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANA 163
+ H+ +++L G C + ++ E + G L + F + + +++ ++ A
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL---LEMCKDVCEA 117
Query: 164 VAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFI 223
+ YL + + R + A N L+++ K+ DF LS + + E + K +
Sbjct: 118 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWS 173
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLT 251
PE S F+ D+++FG + E+ +
Sbjct: 174 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDE---NYSAKLHDFSLSVSIPEGETHV 211
+I I A+ YLH I R +K N+L N KL DF + ET
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTS 172
Query: 212 REEFIKGAYG--FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE +++ CD++S G + LL G
Sbjct: 173 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDE---NYSAKLHDFSLSVSIPEGETHV 211
+I I A+ YLH I R +K N+L N KL DF + ET
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTS 171
Query: 212 REEFIKGAYG--FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE +++ CD++S G + LL G
Sbjct: 172 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 12/152 (7%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
Q+ H N++ L L+ E V G L F SL +I + V Y
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENY---SAKLHDFSLSVSIPEGETHVREEFIKGAYGF 222
LH + I +K N+ LLD+N KL DF L+ I +G V + I G F
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEF 184
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
+APE D++S G LL+G +
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 12/152 (7%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
Q+ H N++ L L+ E V G L F SL +I + V Y
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENY---SAKLHDFSLSVSIPEGETHVREEFIKGAYGF 222
LH + I +K N+ LLD+N KL DF L+ I +G V + I G F
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEF 184
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
+APE D++S G LL+G +
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDE---NYSAKLHDFSLSVSIPEGETHV 211
+I I A+ YLH I R +K N+L N KL DF + ET
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTS 186
Query: 212 REEFIKGAYG--FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE +++ CD++S G + LL G
Sbjct: 187 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + L+ F AS L P IK
Sbjct: 50 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIKS 108
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 109 YLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 166 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 12/152 (7%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
Q+ H N++ L L+ E V G L F SL +I + V Y
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEFIKGAYGF 222
LH + I +K N+ LLD+N KL DF L+ I +G V + I G F
Sbjct: 131 LHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEF 184
Query: 223 IAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
+APE D++S G LL+G +
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 110 MKHKNILKLIGC-----CLETELPTLVFESVKYGTLRGF-SFASLLIAPRIKIAMEIANA 163
++H+NIL I T+L LV + ++G+L + + ++ + IK+A+ A+
Sbjct: 80 LRHENILGFIAADNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 138
Query: 164 VAYLH---VGFD-RP-IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEG--ETHVREEFI 216
+A+LH VG +P I R +K+ N+L+ +N + + D L+V +
Sbjct: 139 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 198
Query: 217 KGAYGFIAPEYFATS-------SFNEMCDVYSFGAFLCELLTGCNV 255
G ++APE S SF D+Y+ G E+ C++
Sbjct: 199 VGTKRYMAPEVLDDSINMKHFESFKR-ADIYAMGLVFWEIARRCSI 243
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 122/298 (40%), Gaps = 54/298 (18%)
Query: 43 RAFSAKDLKKATNNYDLHKV-IQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCF 101
+ F A+DLK L +V +Q+ EG + R ++V++ +
Sbjct: 26 KVFKARDLKNGGRFVALKRVRVQTGE-----EGMPLSTIREVAVLRHLET---------- 70
Query: 102 NNIVFSSQMKHKNILKLIGCCL------ETELPTLVFESVKYGTLRGFSFASLLIAPRIK 155
+H N+++L C ET+L TLVFE V ++ + P +
Sbjct: 71 --------FEHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLT---TYLDKVPEPGVP 118
Query: 156 ------IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGET 209
+ ++ + +LH +V R +K N+L+ + KL DF L+ I +
Sbjct: 119 TETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQM 174
Query: 210 HVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL-T 268
+ + Y APE SS+ D++S G E+ + F+G+ + D L
Sbjct: 175 ALTSVVVTLWYR--APEVLLQSSYATPVDLWSVGCIFAEMFRRKPL--FRGSSDVDQLGK 230
Query: 269 VLEYAKKSIENN--RFGAIVDPIFDEDNSFPGKE--EKLQSLGQ-LMYKCLSKSPEHR 321
+L+ E + R A+ F ++ P ++ + LG+ L+ KCL+ +P R
Sbjct: 231 ILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + E + Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELLTGCNVLEFKG 260
E D++S G + E++ C+ + F G
Sbjct: 204 ENVDIWSVGCIMGEMV--CHKILFPG 227
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + L+ F AS L P IK
Sbjct: 52 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIKS 110
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +A+ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 111 YLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 168 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 216
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 122 CLETELPTL-VFESVKYGTLRGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRC- 179
C+ EL ++ ++E +K +GFS + K A I + LH + + C
Sbjct: 175 CMTFELLSMNLYELIKKNKFQGFSLPLVR-----KFAHSILQCLDALH----KNRIIHCD 225
Query: 180 IKASNVLLDENYSAKLHDFSLSVSIPEGE---THVREEFIKGAYGFIAPEYFATSSFNEM 236
+K N+LL + + + S E + T ++ F + APE + +
Sbjct: 226 LKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR------APEVILGARYGMP 279
Query: 237 CDVYSFGAFLCELLTGCNVLEFKGNGN 263
D++S G L ELLTG +L + G+
Sbjct: 280 IDMWSLGCILAELLTGYPLLPGEDEGD 306
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 18/166 (10%)
Query: 111 KHKNILKLIGCCLETELP-----TLVFESVKYGTLRGF---SFASLLIAPRIKIAM-EIA 161
+H N+++L+ C + TLVFE V LR + + L A IK M +
Sbjct: 72 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ +LH IV R +K N+L+ + KL DF L+ I + + + Y
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALTPVVVTLWYR 186
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
APE S++ D++S G E+ + F GN D L
Sbjct: 187 --APEVLLQSTYATPVDMWSVGCIFAEMFRRKPL--FCGNSEADQL 228
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 110 MKHKNILKLIGC-----CLETELPTLVFESVKYGTLRGF-SFASLLIAPRIKIAMEIANA 163
++H+NIL I T+L LV + ++G+L + + ++ + IK+A+ A+
Sbjct: 60 LRHENILGFIAADNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 118
Query: 164 VAYLH---VGFD-RP-IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEG--ETHVREEFI 216
+A+LH VG +P I R +K+ N+L+ +N + + D L+V +
Sbjct: 119 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 178
Query: 217 KGAYGFIAPEYFATS-------SFNEMCDVYSFGAFLCELLTGCNV 255
G ++APE S SF D+Y+ G E+ C++
Sbjct: 179 VGTKRYMAPEVLDDSINMKHFESFKR-ADIYAMGLVFWEIARRCSI 223
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 111 KHKNILKLIGCCL------ETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAM-EIA 161
+H N+++L C ET+L TLVFE V P IK M ++
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ +LH +V R +K N+L+ + KL DF L+ I + + + Y
Sbjct: 131 RGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALTSVVVTLWYR 186
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL-TVLEYAKKSIENN 280
APE SS+ D++S G E+ + F+G+ + D L +L+ E +
Sbjct: 187 --APEVLLQSSYATPVDLWSVGCIFAEMFRRKPL--FRGSSDVDQLGKILDVIGLPGEED 242
Query: 281 --RFGAIVDPIFDEDNSFPGKE--EKLQSLGQ-LMYKCLSKSPEHR 321
R A+ F ++ P ++ + LG+ L+ KCL+ +P R
Sbjct: 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 122 CLETELPTL-VFESVKYGTLRGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRC- 179
C+ EL ++ ++E +K +GFS + K A I + LH + + C
Sbjct: 175 CMTFELLSMNLYELIKKNKFQGFSLPLVR-----KFAHSILQCLDALH----KNRIIHCD 225
Query: 180 IKASNVLLDENYSAKLHDFSLSVSIPEGE---THVREEFIKGAYGFIAPEYFATSSFNEM 236
+K N+LL + + + S E + T ++ F + APE + +
Sbjct: 226 LKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR------APEVILGARYGMP 279
Query: 237 CDVYSFGAFLCELLTGCNVLEFKGNGN 263
D++S G L ELLTG +L + G+
Sbjct: 280 IDMWSLGCILAELLTGYPLLPGEDEGD 306
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 18/166 (10%)
Query: 111 KHKNILKLIGCCLETELP-----TLVFESVKYGTLRGF---SFASLLIAPRIKIAM-EIA 161
+H N+++L+ C + TLVFE V LR + + L A IK M +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ +LH IV R +K N+L+ + KL DF L+ I + + + Y
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALAPVVVTLWYR 178
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
APE S++ D++S G E+ + F GN D L
Sbjct: 179 --APEVLLQSTYATPVDMWSVGCIFAEMFRRKPL--FCGNSEADQL 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 136 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 193 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 136 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 193 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 100 CFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIA---PRIKI 156
I ++ H NI+KL+ LVFE + + L+ F AS L P IK
Sbjct: 49 AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 107
Query: 157 AM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ +++ H ++ R +K N+L++ + KL DF L+ + E
Sbjct: 108 YLFQLLQGLSFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE ++ D++S G E++T + F G+ D L
Sbjct: 165 VTLWYR--APEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGDSEIDQL 213
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 132 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 189 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 132 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 189 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 110 MKHKNILKLIGC-----CLETELPTLVFESVKYGTLRGF-SFASLLIAPRIKIAMEIANA 163
++H+NIL I T+L LV + ++G+L + + ++ + IK+A+ A+
Sbjct: 57 LRHENILGFIAADNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 115
Query: 164 VAYLH---VGFD-RP-IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEG--ETHVREEFI 216
+A+LH VG +P I R +K+ N+L+ +N + + D L+V +
Sbjct: 116 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 175
Query: 217 KGAYGFIAPEYFATS-------SFNEMCDVYSFGAFLCELLTGCNV 255
G ++APE S SF D+Y+ G E+ C++
Sbjct: 176 VGTKRYMAPEVLDDSINMKHFESFKR-ADIYAMGLVFWEIARRCSI 220
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 110 MKHKNILKLIGC-----CLETELPTLVFESVKYGTLRGF-SFASLLIAPRIKIAMEIANA 163
++H+NIL I T+L LV + ++G+L + + ++ + IK+A+ A+
Sbjct: 55 LRHENILGFIAADNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 113
Query: 164 VAYLH---VGFD-RP-IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEG--ETHVREEFI 216
+A+LH VG +P I R +K+ N+L+ +N + + D L+V +
Sbjct: 114 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 173
Query: 217 KGAYGFIAPEYFATS-------SFNEMCDVYSFGAFLCELLTGCNV 255
G ++APE S SF D+Y+ G E+ C++
Sbjct: 174 VGTKRYMAPEVLDDSINMKHFESFKR-ADIYAMGLVFWEIARRCSI 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 48/295 (16%)
Query: 43 RAFSAKDLKKATNNYDLHKV-IQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCF 101
+ F A+DLK L +V +Q+ EG + R ++V++ +
Sbjct: 26 KVFKARDLKNGGRFVALKRVRVQTGE-----EGMPLSTIREVAVLRHLET---------- 70
Query: 102 NNIVFSSQMKHKNILKLIGCCL------ETELPTLVFESVKYGTLRGFSFASLLIAPR-- 153
+H N+++L C ET+L TLVFE V P
Sbjct: 71 --------FEHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTYLDKVPEPGVPTET 121
Query: 154 IKIAM-EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVR 212
IK M ++ + +LH +V R +K N+L+ + KL DF L+ I + +
Sbjct: 122 IKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALT 177
Query: 213 EEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL-TVLE 271
+ Y APE SS+ D++S G E+ + F+G+ + D L +L+
Sbjct: 178 SVVVTLWYR--APEVLLQSSYATPVDLWSVGCIFAEMFRRKPL--FRGSSDVDQLGKILD 233
Query: 272 YAKKSIENN--RFGAIVDPIFDEDNSFPGKE--EKLQSLGQ-LMYKCLSKSPEHR 321
E + R A+ F ++ P ++ + LG+ L+ KCL+ +P R
Sbjct: 234 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 156 IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEF 215
+ ++ + Y+H I+ R +K N+ ++E+ K+ DF L+ + ++ +
Sbjct: 133 LVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXV 186
Query: 216 IKGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
+ Y APE + + D++S G + E++TG + FKG+ + D L
Sbjct: 187 VTRWYR--APEVILNWMRYTQTVDIWSVGCIMAEMITGKTL--FKGSDHLDQL 235
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 110 MKHKNILKLIGC-----CLETELPTLVFESVKYGTLRGF-SFASLLIAPRIKIAMEIANA 163
++H+NIL I T+L LV + ++G+L + + ++ + IK+A+ A+
Sbjct: 54 LRHENILGFIAADNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 112
Query: 164 VAYLH---VGFD-RP-IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEG--ETHVREEFI 216
+A+LH VG +P I R +K+ N+L+ +N + + D L+V +
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 172
Query: 217 KGAYGFIAPEYFATS-------SFNEMCDVYSFGAFLCELLTGCNV 255
G ++APE S SF D+Y+ G E+ C++
Sbjct: 173 VGTKRYMAPEVLDDSINMKHFESFKR-ADIYAMGLVFWEIARRCSI 217
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 204
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 264
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 265 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 321
Query: 336 LSV 338
++V
Sbjct: 322 INV 324
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 152 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 209 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 197
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 257
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 258 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 314
Query: 336 LSV 338
++V
Sbjct: 315 INV 317
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 197
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 257
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 258 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 314
Query: 336 LSV 338
++V
Sbjct: 315 INV 317
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 208
Query: 235 EMCDVYSFGAFLCELLTGCNVLEFKG 260
E D++S G + E++ C+ + F G
Sbjct: 209 ENVDLWSVGCIMGEMV--CHKILFPG 232
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 196
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 256
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 257 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 313
Query: 336 LSV 338
++V
Sbjct: 314 INV 316
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 320
Query: 336 LSV 338
++V
Sbjct: 321 INV 323
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 202
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 203 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 262
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 263 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 319
Query: 336 LSV 338
++V
Sbjct: 320 INV 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 204
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 264
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 265 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 321
Query: 336 LSV 338
++V
Sbjct: 322 INV 324
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANA 163
+ H+ +++L G C + ++ E + G L + F + + +++ ++ A
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL---LEMCKDVCEA 132
Query: 164 VAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE--THVREEFIKGAYG 221
+ YL + + R + A N L+++ K+ DF LS + + E + V +F
Sbjct: 133 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF---PVR 186
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ PE S F+ D+++FG + E+ +
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 320
Query: 336 LSV 338
++V
Sbjct: 321 INV 323
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSI---------PEGETHVREEFIKGAYGFIAP 225
++ R +K SN+L++ N K+ DF L+ I P G+ E + + + AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW-YRAP 191
Query: 226 EYFATSS-FNEMCDVYSFGAFLCELL 250
E TS+ ++ DV+S G L EL
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 37/199 (18%)
Query: 83 ISVMKFHD---NSTLDDVEYCFNNIVFSSQMK-HKNILKLIGCCLETELPT--LVFESVK 136
++V K D NST D + F I+ +++ H+NI+ L+ LVF+ ++
Sbjct: 37 VAVKKIFDAFQNST--DAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME 94
Query: 137 YGTLRGFSFASLLIAPRIK--IAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAK 194
L A++L P K + ++ + YLH G ++ R +K SN+LL+ K
Sbjct: 95 -TDLHAVIRANIL-EPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVK 149
Query: 195 LHDFSLSVS----------IP----------EGETHVREEFIKGAYGFIAPE-YFATSSF 233
+ DF LS S IP + + + +++ + + APE ++ +
Sbjct: 150 VADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRW-YRAPEILLGSTKY 208
Query: 234 NEMCDVYSFGAFLCELLTG 252
+ D++S G L E+L G
Sbjct: 209 TKGIDMWSLGCILGEILCG 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 197
Query: 235 EMCDVYSFGAFLCELLTGCNVLEFKG 260
E D++S G + E++ C+ + F G
Sbjct: 198 ENVDLWSVGCIMGEMV--CHKILFPG 221
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 134 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 191 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANA 163
+ H+ +++L G C + ++ E + G L + F + + +++ ++ A
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL---LEMCKDVCEA 132
Query: 164 VAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE--THVREEFIKGAYG 221
+ YL + + R + A N L+++ K+ DF LS + + E + V +F
Sbjct: 133 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVR 186
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ PE S F+ D+++FG + E+ +
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 140 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 197 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 132 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 189 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 11/147 (7%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAY 166
+ H+ +++L G C + ++ E + G L + +++ ++ A+ Y
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 119
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE--THVREEFIKGAYGFIA 224
L + + R + A N L+++ K+ DF LS + + E + V +F +
Sbjct: 120 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVRWSP 173
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLT 251
PE S F+ D+++FG + E+ +
Sbjct: 174 PEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 11/147 (7%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGF---SFASLLIAPRIKIAMEIANAVAY 166
+ H+ +++L G C + ++ E + G L + +++ ++ A+ Y
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE--THVREEFIKGAYGFIA 224
L + + R + A N L+++ K+ DF LS + + E + V +F +
Sbjct: 121 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVRWSP 174
Query: 225 PEYFATSSFNEMCDVYSFGAFLCELLT 251
PE S F+ D+++FG + E+ +
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 241
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 301
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 302 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 358
Query: 336 LSV 338
++V
Sbjct: 359 INV 361
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANA 163
+ H+ +++L G C + ++ E + G L + F + + +++ ++ A
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL---LEMCKDVCEA 112
Query: 164 VAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE--THVREEFIKGAYG 221
+ YL + + R + A N L+++ K+ DF LS + + E + V +F
Sbjct: 113 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVR 166
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ PE S F+ D+++FG + E+ +
Sbjct: 167 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 25/183 (13%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + ++ Y + APE +
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY-YRAPEVILGMGYK 241
Query: 235 EMCDVYSFGAFLCELL-------------TGCNVLEFKGNGNDDDLTVLEYAKKSIENNR 281
E D++S G + E++ V+E G + + L+ ++ NR
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 301
Query: 282 --FGAIVDPIFDEDNSFPGKEE----KLQSLGQLMYKCLSKSPEHRPLMVDVAKQLRQMY 335
+ + P D+ FP E K L+ K L P R + V L+ Y
Sbjct: 302 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR---ISVDDALQHPY 358
Query: 336 LSV 338
++V
Sbjct: 359 INV 361
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + E + Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELLTGCNVLEFKG 260
E D++S G + E++ C+ + F G
Sbjct: 204 ENVDLWSVGCIMGEMV--CHKILFPG 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 130 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 187 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 152 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 209 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 130 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 187 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 134 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 191 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 136 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 193 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 136 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 193 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 137 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 194 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 138 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 195 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 129 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 186 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 136 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 193 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 83 ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRG 142
++ K + + +++E I + H I+KL+G ++ E G +
Sbjct: 46 LAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA 105
Query: 143 --FSFASLLIAPRIKIA-MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFS 199
L P+I++ ++ A+ +LH + I+ R +KA NVL+ +L DF
Sbjct: 106 IMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFG 162
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEY-----FATSSFNEMCDVYSFGAFLCEL 249
+S + R+ FI Y ++APE + ++ D++S G L E+
Sbjct: 163 VSAKNLKT-LQKRDSFIGTPY-WMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGF------SFASLLIAPRIKIAMEIANA 163
+ H+ +++L G C + ++ E + G L + F + + +++ ++ A
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL---LEMCKDVCEA 123
Query: 164 VAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGE--THVREEFIKGAYG 221
+ YL + + R + A N L+++ K+ DF LS + + E + V +F
Sbjct: 124 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVR 177
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLT 251
+ PE S F+ D+++FG + E+ +
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 132 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 189 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 25/206 (12%)
Query: 60 HKVIQSDTSYRLFEGTLVDQDRPISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLI 119
H ++ + + F ++ R + ++ D +V + N F + +
Sbjct: 124 HVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI--------- 174
Query: 120 GCCLETELPTL-VFESVKYGTLRGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFR 178
C+ EL ++ ++E +K +GFS + K A I + LH + +
Sbjct: 175 --CMTFELLSMNLYELIKKNKFQGFSLPLVR-----KFAHSILQCLDALH----KNRIIH 223
Query: 179 C-IKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEMC 237
C +K N+LL + + + S E H R + + APE + +
Sbjct: 224 CDLKPENILLKQQGRSGIKVIDFGSSCYE---HQRVYXXIQSRFYRAPEVILGARYGMPI 280
Query: 238 DVYSFGAFLCELLTGCNVLEFKGNGN 263
D++S G L ELLTG +L + G+
Sbjct: 281 DMWSLGCILAELLTGYPLLPGEDEGD 306
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E++
Sbjct: 134 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 191 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 83 ISVMKFHDNSTLDDVEYCFNNIVFSSQMKHKNILKLIGCCLETELPTLVFESVKYGTLRG 142
++ K + + +++E I + H I+KL+G ++ E G +
Sbjct: 38 LAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA 97
Query: 143 --FSFASLLIAPRIKIA-MEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFS 199
L P+I++ ++ A+ +LH + I+ R +KA NVL+ +L DF
Sbjct: 98 IMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFG 154
Query: 200 LSVSIPEGETHVREEFIKGAYGFIAPEY-----FATSSFNEMCDVYSFGAFLCEL 249
+S + R+ FI Y ++APE + ++ D++S G L E+
Sbjct: 155 VSAKNLKT-LQKRDSFIGTPY-WMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 18/166 (10%)
Query: 111 KHKNILKLIGCCLETELP-----TLVFESVKYGTLRGF---SFASLLIAPRIKIAM-EIA 161
+H N+++L+ C + TLVFE V LR + + L A IK M +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 162 NAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYG 221
+ +LH IV R +K N+L+ + KL DF L+ I + + + Y
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALFPVVVTLWYR 178
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDL 267
APE S++ D++S G E+ + F GN D L
Sbjct: 179 --APEVLLQSTYATPVDMWSVGCIFAEMFRRKPL--FCGNSEADQL 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEF 215
++ + Y+H ++ R +K SN+L++EN K+ DF ++ + P + E+
Sbjct: 166 QLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 222
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLT 251
+ + + APE + + + D++S G E+L
Sbjct: 223 VATRW-YRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 13/103 (12%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDE---NYSAKLHDFSLSVSIPEGETHV 211
+I I A+ YLH I R +K N+L N KL DF + ET
Sbjct: 165 EIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTS 216
Query: 212 REEFIKGAYG--FIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
Y ++APE +++ CD +S G LL G
Sbjct: 217 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 175 IVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGAYGFIAPEYFATSSFN 234
I+ R +K SN+++ + + K+ DF L+ + G + + + Y + APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRY-YRAPEVILGMGYK 203
Query: 235 EMCDVYSFGAFLCELLTG 252
E D++S G + E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI---PEGETHVREEF 215
++ + Y+H ++ R +K SN+L++EN K+ DF ++ + P + E+
Sbjct: 167 QLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 223
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLT 251
+ + + APE + + + D++S G E+L
Sbjct: 224 VATRW-YRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|2A4M|A Chain A, Structure Of Trprs Ii Bound To Atp
pdb|2A4M|B Chain B, Structure Of Trprs Ii Bound To Atp
pdb|2A4M|C Chain C, Structure Of Trprs Ii Bound To Atp
Length = 331
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 21/179 (11%)
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIKG 218
+A A+ YL G D P C+ S V E ++ +L +VS V+ E +
Sbjct: 61 LAVALDYLAAGLD-PQKTTCVVQSAV--PELAELTVYFLNLVTVSHLRQNPTVKAEIAQK 117
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIE 278
YG P F ++ D+ +FGA L + DD L +LE ++ +
Sbjct: 118 GYGERVPAGFFVYPVSQAADIAAFGATLVPV-------------GDDQLPMLEQTREIV- 163
Query: 279 NNRFGAIVDPIFDEDNSFPGKEEKLQSL-GQL-MYKCLSKSPEHRPLMVDVAKQLRQMY 335
RF A+ P+ E + + +L L GQ M K L + +VA+++ MY
Sbjct: 164 -RRFNALYAPVLAEPQAQLSRVPRLPGLDGQAKMSKSLGNAIALGDSADEVARKVMGMY 221
>pdb|1YI8|B Chain B, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From
Deinococcus Radiodurans In Complex With L-Trp
pdb|1YI8|A Chain A, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From
Deinococcus Radiodurans In Complex With L-Trp
pdb|1YI8|C Chain C, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From
Deinococcus Radiodurans In Complex With L-Trp
pdb|1YIA|B Chain B, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
Deinococcus Radiodurans In Complex With 5-Hydroxy
Tryptophan.
pdb|1YIA|A Chain A, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
Deinococcus Radiodurans In Complex With 5-Hydroxy
Tryptophan.
pdb|1YIA|C Chain C, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
Deinococcus Radiodurans In Complex With 5-Hydroxy
Tryptophan.
pdb|1YID|B Chain B, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
Deinococcus Radiodurans In Complex With Atp.
pdb|1YID|A Chain A, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
Deinococcus Radiodurans In Complex With Atp.
pdb|1YID|C Chain C, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
Deinococcus Radiodurans In Complex With Atp
Length = 351
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 21/179 (11%)
Query: 160 IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIKG 218
+A A+ YL G D P C+ S V E ++ +L +VS V+ E +
Sbjct: 81 LAVALDYLAAGLD-PQKTTCVVQSAV--PELAELTVYFLNLVTVSHLRQNPTVKAEIAQK 137
Query: 219 AYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIE 278
YG P F ++ D+ +FGA L + DD L +LE ++ +
Sbjct: 138 GYGERVPAGFFVYPVSQAADIAAFGATLVPV-------------GDDQLPMLEQTREIV- 183
Query: 279 NNRFGAIVDPIFDEDNSFPGKEEKLQSL-GQL-MYKCLSKSPEHRPLMVDVAKQLRQMY 335
RF A+ P+ E + + +L L GQ M K L + +VA+++ MY
Sbjct: 184 -RRFNALYAPVLAEPQAQLSRVPRLPGLDGQAKMSKSLGNAIALGDSADEVARKVMGMY 241
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFSLSVSIPEGETHV 211
+I +I A+ +LH I R +K N+L +++ KL DF + E +
Sbjct: 113 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA---KETTQNA 166
Query: 212 REEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+ Y ++APE +++ CD++S G + LL G
Sbjct: 167 LQTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLL---DENYSAKLHDFSLSVSIPEGETHV 211
+I +I A+ +LH I R +K N+L +++ KL DF + E +
Sbjct: 132 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA---KETTQNA 185
Query: 212 REEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTG 252
+ Y ++APE +++ CD++S G + LL G
Sbjct: 186 LQTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 181
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 182 AFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 110 MKHKNILKLIGCCLETELPT--------LVFESVKYGTLRGFSFASLLIA---PRIKIAM 158
+KH+N++ LI C P LVF+ ++ L G +++L+ IK M
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGL-LSNVLVKFTLSEIKRVM 131
Query: 159 E-IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
+ + N + Y+H I+ R +KA+NVL+ + KL DF L+ + + +
Sbjct: 132 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 218 G--AYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
+ PE + D++ G + E+ T +++ GN L ++
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ--GNTEQHQLALI 242
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+L++ K+ DF L+ ++ PE + T E +
Sbjct: 152 QILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 209 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E +
Sbjct: 136 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 193 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 159 EIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLS-VSIPEGE-THVREEFI 216
+I + Y+H ++ R +K SN+LL+ K+ DF L+ V+ P+ + T E +
Sbjct: 137 QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 217 KGAYGFIAPEYFATS-SFNEMCDVYSFGAFLCELLT 251
+ + APE S + + D++S G L E+L+
Sbjct: 194 ATRW-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 181
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 18/150 (12%)
Query: 106 FSSQMKHKNILKLIGCCLETE-----LPTLVFESVKYGTLRGFSFASLLIAPRIKIAMEI 160
F +++ H +I+++ T+ + +V E V +L+ L +A I +EI
Sbjct: 132 FLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEI 191
Query: 161 ANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIKGA 219
A++YLH +G +V+ +K N++L E KL D I ++ G
Sbjct: 192 LPALSYLHSIG----LVYNDLKPENIMLTEE-QLKLIDLGAVSRINS------FGYLYGT 240
Query: 220 YGFIAPEYFATSSFNEMCDVYSFGAFLCEL 249
GF APE T D+Y+ G L L
Sbjct: 241 PGFQAPEIVRTGP-TVATDIYTVGRTLAAL 269
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 181
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 128
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 180
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 110 MKHKNILKLIGCCLETELPT--------LVFESVKYGTLRGFSFASLLIA---PRIKIAM 158
+KH+N++ LI C P LVF+ ++ L G +++L+ IK M
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGL-LSNVLVKFTLSEIKRVM 130
Query: 159 E-IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
+ + N + Y+H I+ R +KA+NVL+ + KL DF L+ + + +
Sbjct: 131 QMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 218 G--AYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
+ PE + D++ G + E+ T +++ GN L ++
Sbjct: 188 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ--GNTEQHQLALI 241
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 181
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 181
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 181
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 181
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 128
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 180
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 22/176 (12%)
Query: 110 MKHKNILKLIGCCLETELPT--------LVFESVKYGTLRGFSFASLLIA---PRIKIAM 158
+KH+N++ LI C P LVF+ ++ L G +++L+ IK M
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGL-LSNVLVKFTLSEIKRVM 131
Query: 159 E-IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL--SVSIPEGETHVREEF 215
+ + N + Y+H I+ R +KA+NVL+ + KL DF L + S+ + R
Sbjct: 132 QMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 216 IKGAYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
+ PE + D++ G + E+ T +++ GN L ++
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ--GNTEQHQLALI 242
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 181
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 181
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 110 MKHKNILKLIGCCLETELPT--------LVFESVKYGTLRGFSFASLLIA---PRIKIAM 158
+KH+N++ LI C P LVF+ ++ L G +++L+ IK M
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGL-LSNVLVKFTLSEIKRVM 131
Query: 159 E-IANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREEFIK 217
+ + N + Y+H I+ R +KA+NVL+ + KL DF L+ + + +
Sbjct: 132 QMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 218 G--AYGFIAPE-YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVL 270
+ PE + D++ G + E+ T +++ GN L ++
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ--GNTEQHQLALI 242
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 181
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 181
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 155 KIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVREE 214
KIA+ I A+ +LH ++ R +K SNVL++ K DF +S + + V ++
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVD---DVAKD 194
Query: 215 FIKGAYGFIAPEY----FATSSFNEMCDVYSFGAFLCEL 249
G + APE ++ D++S G EL
Sbjct: 195 IDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 112 HKNILKLIGCCLETELPTLVFESVKYGTLRGFSFASLLIAPR--IKIAMEIANAVAYLHV 169
+KNIL+LI + LVFE ++ G++ R ++ ++A A+ +LH
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHT 129
Query: 170 GFDRPIVFRCIKASNVLLD--ENYS-AKLHDFSLS-----------VSIPEGETHVREEF 215
+ I R +K N+L + E S K+ DF L ++ PE T
Sbjct: 130 ---KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC---- 182
Query: 216 IKGAYGFIAPEYF-----ATSSFNEMCDVYSFGAFLCELLTG 252
G+ ++APE + +++ CD++S G L +L+G
Sbjct: 183 --GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 40/149 (26%)
Query: 130 LVFESVKYGTL-------RGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKA 182
LVFE ++ G++ R F+ + + ++A+A+ +LH ++ I R +K
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV-----VVQDVASALDFLH---NKGIAHRDLKP 139
Query: 183 SNVLLD---ENYSAKLHDFSLS-----------VSIPEGETHVREEFIKGAYGFIAPEYF 228
N+L + + K+ DF L +S PE T G+ ++APE
Sbjct: 140 ENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC------GSAEYMAPEVV 193
Query: 229 -----ATSSFNEMCDVYSFGAFLCELLTG 252
S +++ CD++S G L LL+G
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 40/149 (26%)
Query: 130 LVFESVKYGTL-------RGFSFASLLIAPRIKIAMEIANAVAYLHVGFDRPIVFRCIKA 182
LVFE ++ G++ R F+ + + ++A+A+ +LH ++ I R +K
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV-----VVQDVASALDFLH---NKGIAHRDLKP 139
Query: 183 SNVLLD---ENYSAKLHDFSLS-----------VSIPEGETHVREEFIKGAYGFIAPEYF 228
N+L + + K+ DF L +S PE T G+ ++APE
Sbjct: 140 ENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC------GSAEYMAPEVV 193
Query: 229 -----ATSSFNEMCDVYSFGAFLCELLTG 252
S +++ CD++S G L LL+G
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 109 QMKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAMEIANAVAY 166
+++H N++ L L+ E V G L F SL + +I N V Y
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 167 LHVGFDRPIVFRCIKASNV-LLDENYSA---KLHDFSLSVSIPEGETHVREEF--IKGAY 220
LH I +K N+ LLD N K+ DF L+ I G EF I G
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTP 181
Query: 221 GFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCN 254
F+APE D++S G LL+G +
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 76/194 (39%), Gaps = 39/194 (20%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSI--------- 204
+KI + AV ++H PI+ R +K N+LL + KL DF + +I
Sbjct: 139 LKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWS 197
Query: 205 PEGETHVREEFIKGAYG-FIAPE---YFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKG 260
+ V EE + + PE ++ E D+++ G L +L F+
Sbjct: 198 AQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL-------YLLCFRQ 250
Query: 261 NGNDDDLTVLEYAKKSIENNRFGAIVDPIFDEDNSFPGKEEKLQSLGQLMYKCLSKSPEH 320
+ +D AK I N ++ S P + + L+ L +PE
Sbjct: 251 HPFEDG------AKLRIVNGKY------------SIPPHDTQYTVFHSLIRAMLQVNPEE 292
Query: 321 RPLMVDVAKQLRQM 334
R + +V QL+++
Sbjct: 293 RLSIAEVVHQLQEI 306
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 178 RCIKASNVLLDENYSAKLHDFSL-SVSIPEGETHVREEFIKGAYGFIAPEYFATSSFNEM 236
R +K N+L+ + A L DF + S + E T + G + APE F+ S
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV--GTLYYXAPERFSESHATYR 215
Query: 237 CDVYSFGAFLCELLTG 252
D+Y+ L E LTG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 17/106 (16%)
Query: 154 IKIAMEIANAVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
I +A++ + + Y+H R IK N+LLD +L DF + + + VR
Sbjct: 171 IVMAIDSVHRLGYVH---------RDIKPDNILLDRCGHIRLADFGSCLKL-RADGTVRS 220
Query: 214 EFIKGAYGFIAPEYFATSSFNEM-------CDVYSFGAFLCELLTG 252
G +++PE CD ++ G F E+ G
Sbjct: 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG 266
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 108 SQMKHKNILKLIGCCLETELPT-----LVFESVKYGTLRGFSFASLLIAPRIKIAMEIAN 162
+ H NIL L + E P LV E ++ + ++I+P+ I + +
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ-HIQYFMYH 142
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSV--SIPEGETHVREEFIKGAY 220
+ LHV + +V R + N+LL +N + DF+L+ + +TH ++ +
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTH----YVTHRW 198
Query: 221 GFIAPEYFAT-SSFNEMCDVYSFGAFLCELL 250
+ APE F ++ D++S G + E+
Sbjct: 199 -YRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 108 SQMKHKNILKLIGCCLETELPT-----LVFESVKYGTLRGFSFASLLIAPRIKIAMEIAN 162
+ H NIL L + E P LV E ++ + ++I+P+ I + +
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ-HIQYFMYH 142
Query: 163 AVAYLHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSV--SIPEGETHVREEFIKGAY 220
+ LHV + +V R + N+LL +N + DF+L+ + +TH ++ +
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTH----YVTHRW 198
Query: 221 GFIAPEYFAT-SSFNEMCDVYSFGAFLCELL 250
+ APE F ++ D++S G + E+
Sbjct: 199 -YRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|4ELD|A Chain A, Crystal Structure Of An Activated Variant Of Small Heat
Shock Protein Hsp16.5
pdb|4ELD|B Chain B, Crystal Structure Of An Activated Variant Of Small Heat
Shock Protein Hsp16.5
Length = 161
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 176 VFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
++R IK + +EN SAK + LSV +P+ E+ +++
Sbjct: 119 IYRTIKLPATVKEENASAKFENGVLSVILPKAESSIKK 156
>pdb|1SHS|A Chain A, Small Heat Shock Protein From Methanococcus Jannaschii
pdb|1SHS|B Chain B, Small Heat Shock Protein From Methanococcus Jannaschii
pdb|1SHS|C Chain C, Small Heat Shock Protein From Methanococcus Jannaschii
pdb|1SHS|D Chain D, Small Heat Shock Protein From Methanococcus Jannaschii
pdb|1SHS|E Chain E, Small Heat Shock Protein From Methanococcus Jannaschii
pdb|1SHS|F Chain F, Small Heat Shock Protein From Methanococcus Jannaschii
pdb|1SHS|G Chain G, Small Heat Shock Protein From Methanococcus Jannaschii
pdb|1SHS|H Chain H, Small Heat Shock Protein From Methanococcus Jannaschii
Length = 147
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 176 VFRCIKASNVLLDENYSAKLHDFSLSVSIPEGETHVRE 213
++R IK + +EN SAK + LSV +P+ E+ +++
Sbjct: 105 IYRTIKLPATVKEENASAKFENGVLSVILPKAESSIKK 142
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 224 APEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLEYAKKSIENN 280
APE ++ D++SFG L EL TG L F+ + + + L ++E + I N
Sbjct: 227 APEVILNLGWDVSSDMWSFGCVLAELYTGS--LLFRTHEHMEHLAMMESIIQPIPKN 281
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 110 MKHKNILKLIGCCLETELPTLVFESVKYGTLRGF--SFASLLIAPRIKIAM-EIANAVAY 166
+KH NI+ L + TLVFE + L+ + +++ +K+ + ++ +AY
Sbjct: 57 LKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAY 115
Query: 167 LHVGFDRPIVFRCIKASNVLLDENYSAKLHDFSL--SVSIPEGETHVREEFIKGAYGFIA 224
H + ++ R +K N+L++E KL DF L + SIP +T+ E +
Sbjct: 116 CH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KTYDNEVV---TLWYRP 168
Query: 225 PE-YFATSSFNEMCDVYSFGAFLCELLTG 252
P+ ++ ++ D++ G E+ TG
Sbjct: 169 PDILLGSTDYSTQIDMWGVGCIFYEMATG 197
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 210 HVREEFIKGAYGFIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTV 269
H I + APE +++ CDV+S G + E G + F+ + N + L +
Sbjct: 207 HEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTL--FQTHDNREHLAM 264
Query: 270 LE 271
+E
Sbjct: 265 ME 266
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLE 271
+ APE +++ CDV+S G L E G V F + + + L ++E
Sbjct: 200 YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV--FPTHDSKEHLAMME 247
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 222 FIAPEYFATSSFNEMCDVYSFGAFLCELLTGCNVLEFKGNGNDDDLTVLE 271
+ APE +++ CDV+S G L E G V F + + + L ++E
Sbjct: 200 YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV--FPTHDSKEHLAMME 247
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 156 IAMEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVS-IPEGETH-VR 212
I + A+ Y+H +G+ V R +KAS++L+ + L ++S I G+ V
Sbjct: 117 ILQGVLKALDYIHHMGY----VHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV 172
Query: 213 EEFIK---GAYGFIAPEYFATS--SFNEMCDVYSFGAFLCELLTG 252
+F K +++PE + ++ D+YS G CEL G
Sbjct: 173 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 217
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 156 IAMEIANAVAYLH-VGFDRPIVFRCIKASNVLLDENYSAKLHDFSLSVS-IPEGETH-VR 212
I + A+ Y+H +G+ V R +KAS++L+ + L ++S I G+ V
Sbjct: 133 ILQGVLKALDYIHHMGY----VHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV 188
Query: 213 EEFIK---GAYGFIAPEYFATS--SFNEMCDVYSFGAFLCELLTG 252
+F K +++PE + ++ D+YS G CEL G
Sbjct: 189 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 233
>pdb|2K8H|A Chain A, Solution Structure Of Sumo From Trypanosoma Brucei
Length = 110
Score = 28.1 bits (61), Expect = 8.2, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 11 SSGEAADSNMVRNEKLLLQKLIATFNGKRNPIRAFSAKDLKKATNNYDLHKVIQSDTSYR 70
+ GE A+ + E L+ + +G R S LKK + Y + I ++
Sbjct: 11 NGGEGAEGT-CKEETALVAVKVVNADGAEMFFRIKSRTALKKLIDTYCKKQGISRNSVRF 69
Query: 71 LFEGTLVDQDRPISVMKFHDNSTLD 95
LF+GT +D+ + + D+ +D
Sbjct: 70 LFDGTPIDETKTPEELGMEDDDVID 94
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,539,073
Number of Sequences: 62578
Number of extensions: 399292
Number of successful extensions: 2616
Number of sequences better than 100.0: 960
Number of HSP's better than 100.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 602
Number of HSP's that attempted gapping in prelim test: 1482
Number of HSP's gapped (non-prelim): 1014
length of query: 339
length of database: 14,973,337
effective HSP length: 99
effective length of query: 240
effective length of database: 8,778,115
effective search space: 2106747600
effective search space used: 2106747600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)