Query 019540
Match_columns 339
No_of_seqs 275 out of 1596
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 03:22:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019540.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019540hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2e1oa1 a.4.1.1 (A:8-64) Homeo 99.8 1.9E-19 1.4E-23 131.9 7.8 57 58-114 1-57 (57)
2 d2craa1 a.4.1.1 (A:7-64) Homeo 99.8 1.7E-19 1.2E-23 132.9 6.9 57 58-114 2-58 (58)
3 d1pufa_ a.4.1.1 (A:) Homeobox 99.8 5.2E-19 3.8E-23 137.1 10.0 63 55-117 11-73 (77)
4 d9anta_ a.4.1.1 (A:) Antennape 99.8 3E-19 2.2E-23 130.8 6.9 55 61-115 1-55 (56)
5 d1ig7a_ a.4.1.1 (A:) Msx-1 hom 99.8 4.8E-19 3.5E-23 130.0 7.7 56 59-114 2-57 (58)
6 d1jgga_ a.4.1.1 (A:) Even-skip 99.8 4.8E-19 3.5E-23 129.8 7.4 56 59-114 1-56 (57)
7 d1zq3p1 a.4.1.1 (P:2-68) Homeo 99.8 5.7E-19 4.1E-23 133.3 7.6 59 58-116 2-60 (67)
8 d1fjla_ a.4.1.1 (A:) Paired pr 99.7 1.9E-18 1.4E-22 129.6 8.5 60 57-116 2-61 (65)
9 d1p7ia_ a.4.1.1 (A:) Engrailed 99.7 1.4E-18 1.1E-22 125.3 7.0 53 59-111 1-53 (53)
10 d1uhsa_ a.4.1.1 (A:) Homeodoma 99.7 2.2E-18 1.6E-22 132.1 7.9 59 58-116 2-61 (72)
11 d1b72a_ a.4.1.1 (A:) Homeobox 99.7 1.7E-18 1.3E-22 137.2 7.3 60 57-116 27-86 (88)
12 d2cuea1 a.4.1.1 (A:7-74) Paire 99.7 4.8E-18 3.5E-22 128.5 8.4 61 58-118 2-62 (68)
13 d1ftta_ a.4.1.1 (A:) Thyroid t 99.7 4.6E-18 3.4E-22 128.7 7.7 59 58-116 3-61 (68)
14 d1yz8p1 a.4.1.1 (P:1-60) Pitui 99.7 1.9E-18 1.4E-22 127.5 5.0 58 58-115 2-59 (60)
15 d1vnda_ a.4.1.1 (A:) VND/NK-2 99.7 2E-18 1.5E-22 133.6 4.8 60 58-117 10-69 (77)
16 d1bw5a_ a.4.1.1 (A:) Insulin g 99.7 9.3E-18 6.8E-22 126.2 6.3 60 57-116 3-62 (66)
17 d1au7a1 a.4.1.1 (A:103-160) Pi 99.7 1.2E-17 8.8E-22 122.6 6.6 57 59-115 1-57 (58)
18 d1le8a_ a.4.1.1 (A:) Mating ty 99.7 1.2E-17 8.6E-22 120.6 6.4 53 61-113 1-53 (53)
19 d1wi3a_ a.4.1.1 (A:) DNA-bindi 99.7 1.4E-17 1E-21 126.5 6.9 60 56-115 6-66 (71)
20 d1ocpa_ a.4.1.1 (A:) Oct-3 POU 99.7 1E-17 7.4E-22 126.5 6.0 59 57-115 8-66 (67)
21 d1e3oc1 a.4.1.1 (C:104-160) Oc 99.7 4.2E-17 3.1E-21 119.3 7.1 56 60-115 1-56 (57)
22 d2cufa1 a.4.1.1 (A:8-89) Homeo 99.7 4.6E-17 3.3E-21 127.0 7.5 59 58-116 1-74 (82)
23 d2ecba1 a.4.1.1 (A:8-83) Zinc 99.7 6E-17 4.4E-21 124.6 7.1 60 58-117 5-64 (76)
24 d2ecca1 a.4.1.1 (A:1-76) Homeo 99.6 1.5E-16 1.1E-20 122.3 7.8 59 58-116 4-62 (76)
25 d1wh7a_ a.4.1.1 (A:) ZF-HD hom 99.6 2.2E-16 1.6E-20 122.7 6.4 60 55-114 15-78 (80)
26 d1x2ma1 a.4.1.1 (A:8-59) Lag1 99.6 3.7E-16 2.7E-20 112.4 4.8 50 65-114 1-51 (52)
27 d1pufb_ a.4.1.1 (B:) pbx1 {Hum 99.6 1.2E-15 8.5E-20 116.3 7.9 59 58-116 2-63 (73)
28 d1s7ea1 a.4.1.1 (A:103-152) He 99.6 4.2E-16 3.1E-20 110.7 3.8 49 61-109 2-50 (50)
29 d1k61a_ a.4.1.1 (A:) mat alpha 99.6 1.9E-15 1.4E-19 111.3 7.4 54 61-114 2-58 (60)
30 d2cqxa1 a.4.1.1 (A:8-66) LAG1 99.5 1.9E-15 1.4E-19 111.2 4.3 56 59-114 3-59 (59)
31 d1lfba_ a.4.1.1 (A:) Hepatocyt 99.5 4E-15 2.9E-19 115.3 5.7 55 61-115 1-76 (78)
32 d1x2na1 a.4.1.1 (A:6-67) Homeo 99.4 1E-13 7.6E-18 102.6 8.0 56 58-113 3-61 (62)
33 d1hlva1 a.4.1.7 (A:1-66) DNA-b 90.1 0.38 2.7E-05 34.7 6.4 48 59-109 3-50 (66)
34 d2jn6a1 a.4.1.19 (A:1-89) Unch 82.5 0.87 6.4E-05 33.3 5.0 42 61-106 3-45 (89)
35 d1ijwc_ a.4.1.2 (C:) HIN recom 69.1 5.1 0.00037 26.4 5.4 41 61-106 3-43 (47)
36 d1rp3a2 a.4.13.2 (A:164-234) S 56.0 9.8 0.00072 25.5 5.2 45 64-113 22-66 (71)
37 d1or7a1 a.4.13.2 (A:120-187) S 54.9 11 0.00081 25.4 5.3 45 64-113 19-63 (68)
38 d2pq3a1 a.39.1.5 (A:3-75) Calm 38.9 14 0.00099 25.1 3.6 43 64-106 2-51 (73)
39 d1f54a_ a.39.1.5 (A:) Calmodul 37.2 25 0.0018 23.8 4.9 43 64-106 4-53 (77)
40 d1bl0a1 a.4.1.8 (A:9-62) MarA 35.8 5.2 0.00038 26.0 0.8 31 76-106 11-41 (54)
41 d1fsea_ a.4.6.2 (A:) Germinati 32.4 18 0.0013 24.3 3.4 41 62-108 3-43 (67)
42 d1avsa_ a.39.1.5 (A:) Troponin 29.8 45 0.0033 22.8 5.3 44 63-106 7-57 (81)
43 d1iufa1 a.4.1.7 (A:-2-75) Ars- 25.0 35 0.0026 24.7 3.9 30 58-87 6-36 (78)
44 d1wrka1 a.39.1.5 (A:4-85) Trop 24.6 73 0.0053 21.8 5.7 43 64-106 9-59 (82)
45 d1l3la1 a.4.6.2 (A:170-234) Qu 23.4 30 0.0022 23.1 3.1 44 63-112 4-47 (65)
46 d1ku3a_ a.4.13.2 (A:) Sigma70 21.4 44 0.0032 22.5 3.7 38 64-102 9-46 (61)
47 d1dpua_ a.4.5.16 (A:) C-termin 21.1 29 0.0021 24.3 2.7 38 64-102 4-42 (69)
48 d1c07a_ a.39.1.6 (A:) Eps15 {H 21.1 52 0.0038 23.2 4.3 43 64-106 4-51 (95)
49 d2auwa1 a.35.1.10 (A:88-154) H 20.7 20 0.0015 25.0 1.7 24 87-110 17-40 (67)
50 d1s7oa_ a.4.13.3 (A:) Hypothet 20.3 1.5E+02 0.011 21.6 9.4 44 64-112 17-60 (106)
51 d2cpra1 a.60.8.4 (A:483-595) E 20.3 73 0.0053 23.3 5.2 33 61-101 17-49 (113)
No 1
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.9e-19 Score=131.86 Aligned_cols=57 Identities=46% Similarity=0.758 Sum_probs=54.4
Q ss_pred CCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhh
Q 019540 58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Kr 114 (339)
+++|++||+.|+.+||..|..++||+..++.+||..|||+++||++||||||+|+||
T Consensus 1 k~~R~~ft~~Q~~~Le~~F~~n~yp~~~~r~~LA~~l~L~~~qV~~WFqNrR~k~kk 57 (57)
T d2e1oa1 1 KGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 57 (57)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHhhHhhhhhhhhccC
Confidence 456788999999999999999999999999999999999999999999999999986
No 2
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.7e-19 Score=132.94 Aligned_cols=57 Identities=28% Similarity=0.569 Sum_probs=53.8
Q ss_pred CCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhh
Q 019540 58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Kr 114 (339)
+++|++||.+|+.+||..|..++||+..+|++||..|||+++||+|||||||+|+||
T Consensus 2 rr~Rt~ft~~Q~~~Le~~F~~~~yp~~~~r~~LA~~l~l~~~qV~vWFqNrR~k~kk 58 (58)
T d2craa1 2 RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKK 58 (58)
T ss_dssp CCSCCCSCHHHHHHHHHHHHHCSSCCHHHHHHHHHHTCCCHHHHHHHHHHHHHTTTS
T ss_pred CCCCCCCCHHHHHHHHHHHhhcCCCCHHHHHHHHHHcCCCHHHeeecccchhhhccC
Confidence 455677999999999999999999999999999999999999999999999999985
No 3
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=5.2e-19 Score=137.06 Aligned_cols=63 Identities=33% Similarity=0.485 Sum_probs=57.8
Q ss_pred CCCCCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhHHH
Q 019540 55 GHVSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117 (339)
Q Consensus 55 ~k~krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krkq~ 117 (339)
...+++|++||.+|+.+||..|..++||+..+|++||..|||+++||+|||||||+|+|+...
T Consensus 11 ~~~rr~Rt~ft~~Ql~~Le~~F~~~~yPs~~~r~~LA~~l~l~~~qV~iWFqNrR~k~kr~~~ 73 (77)
T d1pufa_ 11 RSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINK 73 (77)
T ss_dssp CTTSCCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCCHHHhhhhhhhhHHHHHHHHH
Confidence 334566778999999999999999999999999999999999999999999999999998654
No 4
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=99.76 E-value=3e-19 Score=130.83 Aligned_cols=55 Identities=36% Similarity=0.727 Sum_probs=52.9
Q ss_pred CCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhH
Q 019540 61 KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115 (339)
Q Consensus 61 RrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krk 115 (339)
|++||.+|+.+||..|..++||+..+|.+||..|||++++|+|||||||+|+|++
T Consensus 1 Rt~ft~~Q~~~Le~~F~~~~yp~~~~r~~LA~~l~l~~~~V~iWFQNrRak~kk~ 55 (56)
T d9anta_ 1 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKE 55 (56)
T ss_dssp CCCCCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCChhHeeeccccchhhhhhc
Confidence 5679999999999999999999999999999999999999999999999999974
No 5
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=4.8e-19 Score=129.96 Aligned_cols=56 Identities=32% Similarity=0.564 Sum_probs=53.6
Q ss_pred CCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhh
Q 019540 59 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114 (339)
Q Consensus 59 rKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Kr 114 (339)
++|++||++|+.+||..|..++||+..++.+||..|||++++|++||||||+|+|+
T Consensus 2 r~Rt~ft~~Ql~~Le~~F~~~~yP~~~~r~~LA~~l~l~~~~V~~WFqNrR~k~kr 57 (58)
T d1ig7a_ 2 KPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 57 (58)
T ss_dssp CCCCCCCHHHHHHHHHHHHHCSCCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCChhheeecCcchHhHhcc
Confidence 45677999999999999999999999999999999999999999999999999997
No 6
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.76 E-value=4.8e-19 Score=129.75 Aligned_cols=56 Identities=38% Similarity=0.574 Sum_probs=53.6
Q ss_pred CCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhh
Q 019540 59 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114 (339)
Q Consensus 59 rKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Kr 114 (339)
++|+.||++|+.+||..|..++||+..++.+||.++||++++|+|||||||+|+|+
T Consensus 1 R~Rt~fT~~Ql~~Le~~F~~~~yp~~~~r~~LA~~lgl~~~qV~vWFqNrR~k~kk 56 (57)
T d1jgga_ 1 RYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKR 56 (57)
T ss_dssp CCCCCCCHHHHHHHHHHHHHCSCCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCChhHhhhcchhhhhhhhc
Confidence 35677999999999999999999999999999999999999999999999999997
No 7
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.76 E-value=5.7e-19 Score=133.32 Aligned_cols=59 Identities=31% Similarity=0.530 Sum_probs=55.6
Q ss_pred CCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhHH
Q 019540 58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krkq 116 (339)
+++|++||.+|+.+||..|..++||+..++.+||..|||++++|+|||||||+|+|+..
T Consensus 2 rr~Rt~ft~~Ql~~Le~~F~~~~yp~~~~r~~LA~~l~l~~~~V~iWFqNrR~k~kk~~ 60 (67)
T d1zq3p1 2 RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQS 60 (67)
T ss_dssp SCCSCCCCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCCccceeeccccHHHhHhhhh
Confidence 45677799999999999999999999999999999999999999999999999999865
No 8
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.74 E-value=1.9e-18 Score=129.58 Aligned_cols=60 Identities=32% Similarity=0.519 Sum_probs=55.9
Q ss_pred CCCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhHH
Q 019540 57 VSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116 (339)
Q Consensus 57 ~krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krkq 116 (339)
+++.|++||.+|+.+||..|..++||+..++.+||..|||+++||++||||||+|+|++.
T Consensus 2 ~rr~Rt~ft~~Q~~~Le~~F~~n~yPs~~~r~~LA~~lgl~~~~V~~WFqNrR~k~kk~~ 61 (65)
T d1fjla_ 2 QRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRKQH 61 (65)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCCChHHHHHHHHHhCCCHHHhhHhhhhHHHHHHhcc
Confidence 355666799999999999999999999999999999999999999999999999999864
No 9
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=99.74 E-value=1.4e-18 Score=125.32 Aligned_cols=53 Identities=34% Similarity=0.659 Sum_probs=50.5
Q ss_pred CCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHH
Q 019540 59 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 111 (339)
Q Consensus 59 rKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK 111 (339)
++|+.||++|+.+||..|..++||+..+|.+||..|||+++||+|||||||+|
T Consensus 1 R~Rt~ft~~Q~~~Le~~F~~~~yp~~~~r~~LA~~lgL~~~qV~vWFqNrRaK 53 (53)
T d1p7ia_ 1 RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNARAK 53 (53)
T ss_dssp CCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHC
T ss_pred CCCccCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCChHHhhhcccccCCC
Confidence 35677999999999999999999999999999999999999999999999996
No 10
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=2.2e-18 Score=132.08 Aligned_cols=59 Identities=34% Similarity=0.590 Sum_probs=54.7
Q ss_pred CCCCCcCCHHHHHHHHHHhhh-hcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhHH
Q 019540 58 SEKKRRLSVDQVKALEKNFEV-ENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F~~-~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krkq 116 (339)
+++|.+||.+|+.+||..|.. ++||+..+|++||.++||++++|+|||||||+|+|+.+
T Consensus 2 ~~~r~~fT~~Ql~~Le~~F~~~n~yP~~~~r~~LA~~lgL~~~~VqvWFqNrRak~rk~~ 61 (72)
T d1uhsa_ 2 SEGAATMTEDQVEILEYNFNKVNKHPDPTTLCLIAAEAGLTEEQTQKWFKQRLAEWRRSE 61 (72)
T ss_dssp CCCCCCCCHHHHHHHHHHHHSSCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHccccCCHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcc
Confidence 456788999999999999986 67999999999999999999999999999999999854
No 11
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.7e-18 Score=137.20 Aligned_cols=60 Identities=35% Similarity=0.596 Sum_probs=54.6
Q ss_pred CCCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhHH
Q 019540 57 VSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116 (339)
Q Consensus 57 ~krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krkq 116 (339)
.+++|++||.+|+.+||..|..++||+..+|++||.+|||++++|+|||||||+|+|+++
T Consensus 27 ~kr~Rt~ft~~Ql~~Le~~F~~n~yPs~~~r~~LA~~l~l~~~~V~vWFqNrR~k~Kk~~ 86 (88)
T d1b72a_ 27 PSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKRE 86 (88)
T ss_dssp ---CCCCCCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCCHHHHHHHHHHHHhCCCCchHHHHHHHHHcCCCHHHeeeccHhHHHHHHHhc
Confidence 455666799999999999999999999999999999999999999999999999999864
No 12
>d2cuea1 a.4.1.1 (A:7-74) Paired box protein pax6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=4.8e-18 Score=128.48 Aligned_cols=61 Identities=30% Similarity=0.601 Sum_probs=56.3
Q ss_pred CCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhHHHH
Q 019540 58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE 118 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krkq~e 118 (339)
+++|++||.+|+.+||..|..++||+..+|++||..|||++++|++||||||+|+|+....
T Consensus 2 rR~Rt~ft~~Ql~~Le~~F~~n~yP~~~~r~~LA~~l~L~~~~V~~WFqNrR~k~kr~~~~ 62 (68)
T d2cuea1 2 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKL 62 (68)
T ss_dssp CCCCCCSCHHHHHHHHHHHTTCSSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHhCcChhheeecCcchhHHHHhhhhh
Confidence 3456779999999999999999999999999999999999999999999999999986543
No 13
>d1ftta_ a.4.1.1 (A:) Thyroid transcription factor 1 homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.72 E-value=4.6e-18 Score=128.67 Aligned_cols=59 Identities=32% Similarity=0.538 Sum_probs=55.5
Q ss_pred CCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhHH
Q 019540 58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krkq 116 (339)
+++|++||+.|+.+||..|..++||+..+|.+||..|||++++|++||||||+|+|+..
T Consensus 3 rr~Rt~ft~~Ql~~Le~~F~~~~yPs~~~r~~LA~~l~L~~~~V~~WFqNrR~k~kk~~ 61 (68)
T d1ftta_ 3 RKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQA 61 (68)
T ss_dssp SSSCSSCCHHHHHHHHHHHHHSSSCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCCccceeeecccHHHHHhhcc
Confidence 45667799999999999999999999999999999999999999999999999999854
No 14
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.9e-18 Score=127.49 Aligned_cols=58 Identities=26% Similarity=0.560 Sum_probs=55.1
Q ss_pred CCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhH
Q 019540 58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krk 115 (339)
+++|++||++|+.+||..|..++||+..++..||.++||++++|++||||||+|+|++
T Consensus 2 rr~Rt~ft~~Q~~~Le~~F~~~~yP~~~~r~~LA~~l~l~~~~V~~WFqNrR~k~kr~ 59 (60)
T d1yz8p1 2 RRQRTHFTSQQLQQLEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKR 59 (60)
T ss_dssp SCSCCCCCHHHHHHHHHHHTTCSSCCTTTTTHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCChHHHHHHHHHHCCChHHHHHHhHHHHHHHHhc
Confidence 4567779999999999999999999999999999999999999999999999999985
No 15
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.71 E-value=2e-18 Score=133.56 Aligned_cols=60 Identities=30% Similarity=0.471 Sum_probs=54.6
Q ss_pred CCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhHHH
Q 019540 58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krkq~ 117 (339)
++.|++||.+|+.+||..|..++||+..++++||..|||+++||++||||||+|+|+.+.
T Consensus 10 rr~Rt~ft~~Q~~~Le~~F~~~~yP~~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~~ 69 (77)
T d1vnda_ 10 RKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQN 69 (77)
T ss_dssp CSSCCCCCTTHHHHHHHHHHHCSCCCHHHHHHHHHHHTCCHHHHHHHHHHSSSSCSSSCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCChhhhhhcchhHHHHHHHHhh
Confidence 334445999999999999999999999999999999999999999999999999997553
No 16
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.69 E-value=9.3e-18 Score=126.21 Aligned_cols=60 Identities=27% Similarity=0.494 Sum_probs=56.0
Q ss_pred CCCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhHH
Q 019540 57 VSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116 (339)
Q Consensus 57 ~krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krkq 116 (339)
.++.|++||.+|+.+||..|..++||+..++++||.++||++++|++||||||++.|+..
T Consensus 3 ~kR~Rt~~t~~Q~~~Le~~F~~n~~Ps~~~~~~LA~~l~l~~~~V~~WFqNrR~k~kk~~ 62 (66)
T d1bw5a_ 3 TTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRS 62 (66)
T ss_dssp CSCCCCCCSHHHHHHHHHHHHHCSCCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHCSSCC
T ss_pred CCCCCcCcCHHHHHHHHHHHHHCCCCCHHHHHHHHHHcCcCHHHhhhhhHhHHHHHHHHH
Confidence 456667799999999999999999999999999999999999999999999999999854
No 17
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.69 E-value=1.2e-17 Score=122.56 Aligned_cols=57 Identities=33% Similarity=0.565 Sum_probs=54.2
Q ss_pred CCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhH
Q 019540 59 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115 (339)
Q Consensus 59 rKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krk 115 (339)
++|+.|+.+|+.+||..|..++||+..++.+||.++||++++|++||||||+++|+.
T Consensus 1 r~Rt~~s~~q~~~Le~~F~~~~~P~~~~~~~La~~l~l~~~~V~~WFqNrR~k~kr~ 57 (58)
T d1au7a1 1 KRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRV 57 (58)
T ss_dssp CCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhc
Confidence 467779999999999999999999999999999999999999999999999999974
No 18
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.69 E-value=1.2e-17 Score=120.56 Aligned_cols=53 Identities=36% Similarity=0.562 Sum_probs=51.1
Q ss_pred CCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhh
Q 019540 61 KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113 (339)
Q Consensus 61 RrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~K 113 (339)
|++||++|+.+||..|..++||+..++.+||.++||+++||++||||||+|.|
T Consensus 1 Rt~~s~~q~~~Le~~F~~~~~P~~~~~~~LA~~lgl~~~qV~~WFqNrR~k~K 53 (53)
T d1le8a_ 1 KSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK 53 (53)
T ss_dssp CCCCCHHHHHHHHHHHHHCSCCCHHHHHHHHHHTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCHHHHHHHHHhhhhccC
Confidence 56799999999999999999999999999999999999999999999999976
No 19
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=1.4e-17 Score=126.53 Aligned_cols=60 Identities=18% Similarity=0.243 Sum_probs=54.9
Q ss_pred CCCCCCCcCCHHHHHHHHHHhhh-hcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhH
Q 019540 56 HVSEKKRRLSVDQVKALEKNFEV-ENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115 (339)
Q Consensus 56 k~krKRrRfT~~Ql~~LE~~F~~-~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krk 115 (339)
..+++|++|+.+|+.+||.+|.. ++||+..++++||.+|||+++||++||||||+++|+.
T Consensus 6 ~~~r~R~~~t~~Q~~~Le~~F~~~~~~P~~~~~~~La~~lgl~~~qV~~WFqNrR~k~kk~ 66 (71)
T d1wi3a_ 6 SGPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHS 66 (71)
T ss_dssp CCCCCCCCCCSHHHHHHHHHHHHHCSCCCHHHHHHHHHHSCCCHHHHHHHHHHHHHHCCSS
T ss_pred CCCCCCccCCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCHHHHHHHhHhhHhhhccc
Confidence 34567788999999999999974 8999999999999999999999999999999999863
No 20
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=1e-17 Score=126.48 Aligned_cols=59 Identities=29% Similarity=0.366 Sum_probs=55.4
Q ss_pred CCCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhH
Q 019540 57 VSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115 (339)
Q Consensus 57 ~krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krk 115 (339)
++++|++|+.+|+..|+..|..++||+..++++||.++||++++|++||||||+++|+.
T Consensus 8 ~rr~Rt~~t~~q~~~Le~~F~~n~~P~~~~r~~La~~~~l~~~~V~~WFqNrR~k~Kk~ 66 (67)
T d1ocpa_ 8 RKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDVVRVWFCNRRQKGKRS 66 (67)
T ss_dssp SSSCCSSCCHHHHHHHHHHHSSCSCCCHHHHHHHHHHHTCCHHHHHHHHHHHHSSSSSC
T ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHHHHcCCHHHHHHHhHHHHHHHhcC
Confidence 45667779999999999999999999999999999999999999999999999999873
No 21
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=4.2e-17 Score=119.32 Aligned_cols=56 Identities=30% Similarity=0.475 Sum_probs=53.6
Q ss_pred CCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhH
Q 019540 60 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 115 (339)
Q Consensus 60 KRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krk 115 (339)
||++|+.+|+.+||..|..++||+..++.+||.++||+++||++||||||+++|+.
T Consensus 1 kRT~~~~~q~~~Le~~F~~~~~P~~~~~~~LA~~lgL~~~qV~~WFqNrR~k~kk~ 56 (57)
T d1e3oc1 1 KRTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFSNRRQKEKRI 56 (57)
T ss_dssp CCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTSC
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHcc
Confidence 57789999999999999999999999999999999999999999999999999973
No 22
>d2cufa1 a.4.1.1 (A:8-89) Homeobox-containing protein 1, HMBOX1 (Flj21616) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=4.6e-17 Score=127.00 Aligned_cols=59 Identities=17% Similarity=0.318 Sum_probs=54.7
Q ss_pred CCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhC---------------CChHHHhhhhHhhHHHhhhHH
Q 019540 58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELG---------------LQPRQVAVWFQNRRARWKTKQ 116 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~Lg---------------LserQVqVWFQNRRaK~Krkq 116 (339)
+++|.+|+++|+.+||..|..++||+..+|++||..+| |++.+|++||||||+|+|++.
T Consensus 1 Rr~R~~ft~~Ql~~LE~~F~~n~yP~~~~R~~LA~~~~~~~~~~~~~~~~~~~l~~~~V~vWFqNRR~k~kk~~ 74 (82)
T d2cufa1 1 RGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRA 74 (82)
T ss_dssp CCCSCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHCCTTCCCCTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHhccccccccccchhccCCCHHHHHHHHhhhHHHHHHhh
Confidence 35677799999999999999999999999999999885 999999999999999999864
No 23
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=6e-17 Score=124.58 Aligned_cols=60 Identities=20% Similarity=0.371 Sum_probs=54.5
Q ss_pred CCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhHHH
Q 019540 58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 117 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krkq~ 117 (339)
++|++++|++|+.+||..|..++||+..++++||..|||++++|++||||||++.|+.+.
T Consensus 5 p~k~k~~T~~Q~~~Le~~F~~~~~P~~~~r~~LA~~l~l~~~~V~~WFqNrR~r~k~~~~ 64 (76)
T d2ecba1 5 PQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKALKEE 64 (76)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHSCCS
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCCCHHHHHHhHHHHHHHHHHHhH
Confidence 345566899999999999999999999999999999999999999999999999887543
No 24
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=1.5e-16 Score=122.25 Aligned_cols=59 Identities=25% Similarity=0.299 Sum_probs=54.9
Q ss_pred CCCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhHH
Q 019540 58 SEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krkq 116 (339)
..+++|+|.+|+.+||..|..++||+..++.+||..+||+++||++||||||+++|+.+
T Consensus 4 ~s~~~r~T~eQ~~~Le~~F~~n~~Ps~~~~~~La~~~gL~~~qV~~WF~NrR~k~k~~~ 62 (76)
T d2ecca1 4 GSSGKRKTKEQLAILKSFFLQCQWARREDYQKLEQITGLPRPEIIQWFGDTRYALKHGQ 62 (76)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhch
Confidence 34566799999999999999999999999999999999999999999999999999754
No 25
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.62 E-value=2.2e-16 Score=122.67 Aligned_cols=60 Identities=13% Similarity=0.266 Sum_probs=53.6
Q ss_pred CCCCCCCCcCCHHHHHHHHHHhhh----hcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhh
Q 019540 55 GHVSEKKRRLSVDQVKALEKNFEV----ENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114 (339)
Q Consensus 55 ~k~krKRrRfT~~Ql~~LE~~F~~----~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Kr 114 (339)
++++++|++||.+|++.|+.+|+. ++||+..++++||.+|||++++|+|||||+|+++|.
T Consensus 15 ~~~kR~Rt~ft~~Q~~~L~~~fe~~~~~~~~p~~~~~~~la~~~gl~~~~i~vWFqN~R~~~k~ 78 (80)
T d1wh7a_ 15 GTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSGPS 78 (80)
T ss_dssp CCSSCCCCCCCHHHHHHHHHHHHHHTSCCCSSTTHHHHHHHHHSCCCHHHHHHHHHTTSCCSCC
T ss_pred cCCCCccccCCHHHHHHHHHHHHHhcccccCcCHHHHHHHHHHHCCCHHHeeeecccCcCCCCC
Confidence 334556667999999999999987 789999999999999999999999999999998875
No 26
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6, LASS6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.59 E-value=3.7e-16 Score=112.37 Aligned_cols=50 Identities=26% Similarity=0.442 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHhhh-hcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhh
Q 019540 65 SVDQVKALEKNFEV-ENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114 (339)
Q Consensus 65 T~~Ql~~LE~~F~~-~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Kr 114 (339)
|++|+.+||..|.. ++||+..++.+||.++||++++|++||||||+++|+
T Consensus 1 T~~q~~iLE~~F~~~~~~P~~~~~~~LA~~~~ls~~qV~~WFqNrR~k~k~ 51 (52)
T d1x2ma1 1 TAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKP 51 (52)
T ss_dssp SSCHHHHHHHHHHTTCSSCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHSCC
T ss_pred ChhHHHHHHHHHHHcCCCcCHHHHHHHHHHHCcCHHHHHHHHHhhhcccCc
Confidence 56899999999987 689999999999999999999999999999999985
No 27
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.2e-15 Score=116.32 Aligned_cols=59 Identities=29% Similarity=0.474 Sum_probs=54.0
Q ss_pred CCCCCcCCHHHHHHHHHHhhh---hcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhhHH
Q 019540 58 SEKKRRLSVDQVKALEKNFEV---ENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 116 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F~~---~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Krkq 116 (339)
+++|++|+.+|+.+|+..|.. ++||+..++++||.++||+++||++||||+|+|+|+..
T Consensus 2 rk~R~~~t~~q~~~Le~~f~~~~~~pYPs~~~k~~La~~~gl~~~qv~~WF~N~R~r~k~~~ 63 (73)
T d1pufb_ 2 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNI 63 (73)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHCcCHHHhHHHHHHHHHHhcccc
Confidence 456677999999999999985 78999999999999999999999999999999998744
No 28
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=4.2e-16 Score=110.69 Aligned_cols=49 Identities=24% Similarity=0.392 Sum_probs=47.6
Q ss_pred CCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhH
Q 019540 61 KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRR 109 (339)
Q Consensus 61 RrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRR 109 (339)
|++||.+|+.+||..|..++||+..++.+||.+|||++++|++||||||
T Consensus 2 Rt~ft~~Q~~~Le~~F~~n~~P~~~~~~~LA~~l~l~~~~V~~WFqNrR 50 (50)
T d1s7ea1 2 RLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNAR 50 (50)
T ss_dssp CSCCCHHHHHHHHHHTTSSCSSTHHHHHHHHTTSCSSSHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCcCHHHhhhcCCcCc
Confidence 5779999999999999999999999999999999999999999999997
No 29
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.57 E-value=1.9e-15 Score=111.32 Aligned_cols=54 Identities=28% Similarity=0.408 Sum_probs=50.2
Q ss_pred CCcCCHHHHHHHHHHhhhh---cCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhh
Q 019540 61 KRRLSVDQVKALEKNFEVE---NKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114 (339)
Q Consensus 61 RrRfT~~Ql~~LE~~F~~~---~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Kr 114 (339)
++||+.+|+.+|+..|..+ +||+..++++||.++||+++||++||||+|+|.|.
T Consensus 2 ~~Rft~~q~~~L~~~f~~~~~~pyPs~~e~~~La~~~gL~~~qV~~WF~N~R~r~K~ 58 (60)
T d1k61a_ 2 GHRFTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRKEKT 58 (60)
T ss_dssp CCSCCHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHCcCHHHHhHHhHhhcccccc
Confidence 4569999999999999875 69999999999999999999999999999998875
No 30
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5, LASS5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=1.9e-15 Score=111.23 Aligned_cols=56 Identities=25% Similarity=0.387 Sum_probs=50.9
Q ss_pred CCCCcCCHHHHHHHHHHhhh-hcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhhh
Q 019540 59 EKKRRLSVDQVKALEKNFEV-ENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKT 114 (339)
Q Consensus 59 rKRrRfT~~Ql~~LE~~F~~-~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~Kr 114 (339)
+.+.+++.+|..+||.+|.. ++||+..++++||+++||+++||++||||||+++|.
T Consensus 3 k~~~~~k~~~~~iLE~~F~~~~~yPs~~~~~~LA~~lgls~~qV~~WFqNrR~k~rp 59 (59)
T d2cqxa1 3 KDSPVNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQLDWSVRKIQCWFRHRRNQDKP 59 (59)
T ss_dssp CCCCCSCSCSTTHHHHHHHHTCSSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSS
T ss_pred CCCCCCCccccHHHHHHHHHcCCCcCHHHHHHHHHHHCcCHHHHHHHHHhhhcccCc
Confidence 34566889999999999986 689999999999999999999999999999999873
No 31
>d1lfba_ a.4.1.1 (A:) Hepatocyte nuclear factor 1a (LFB1/HNF1) {Rat (Rattus rattus) [TaxId: 10117]}
Probab=99.52 E-value=4e-15 Score=115.26 Aligned_cols=55 Identities=20% Similarity=0.309 Sum_probs=51.9
Q ss_pred CCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhC---------------------CChHHHhhhhHhhHHHhhhH
Q 019540 61 KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELG---------------------LQPRQVAVWFQNRRARWKTK 115 (339)
Q Consensus 61 RrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~Lg---------------------LserQVqVWFQNRRaK~Krk 115 (339)
|.+||+.|+.+||..|+.++||+..+|++||.+|+ |++.+|++||||||++.|++
T Consensus 1 R~~~tp~Ql~~Le~~F~~n~yPs~~~Re~LA~~ln~~~~~~~~~~~~~~~~~~~~~vt~~~V~~WF~NRR~~~kr~ 76 (78)
T d1lfba_ 1 RFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFR 76 (78)
T ss_dssp CCCCCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHTTTTCCTTCTTTTGGGCCCHHHHHHHHHHHHHTTSCC
T ss_pred CccCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHhchhhhccccccccccccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 46799999999999999999999999999999994 89999999999999999975
No 32
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=1e-13 Score=102.59 Aligned_cols=56 Identities=21% Similarity=0.245 Sum_probs=50.8
Q ss_pred CCCCCcCCHHHHHHHHHHhhh---hcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhh
Q 019540 58 SEKKRRLSVDQVKALEKNFEV---ENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F~~---~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~K 113 (339)
+++|.+|+.+++.+|+.+|.. ++||+..++..||.++||+..||++||+|+|+|..
T Consensus 3 krkR~~~~~~~~~iL~~wf~~~~~nPyPs~~e~~~La~~~~l~~~qI~~WF~N~R~R~l 61 (62)
T d1x2na1 3 KNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRIL 61 (62)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHCcCHHHhHHHHHHHHHHhc
Confidence 345667999999999999985 78999999999999999999999999999998754
No 33
>d1hlva1 a.4.1.7 (A:1-66) DNA-binding domain of centromere binding protein B (CENP-B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.07 E-value=0.38 Score=34.66 Aligned_cols=48 Identities=21% Similarity=0.432 Sum_probs=39.2
Q ss_pred CCCCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhH
Q 019540 59 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRR 109 (339)
Q Consensus 59 rKRrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRR 109 (339)
.||+.+|..+-..+-..|+..+... +.+||+.+|+....|..|..||.
T Consensus 3 ~kRk~LT~~eK~~ii~~~e~g~k~s---q~eIA~~fGv~~STvs~IlKnK~ 50 (66)
T d1hlva1 3 PKRRQLTFREKSRIIQEVEENPDLR---KGEIARRFNIPPSTLSTILKNKR 50 (66)
T ss_dssp CSSCCCCHHHHHHHHHHHHHCTTSC---HHHHHHHHTCCHHHHHHHHHTHH
T ss_pred cccccCCHHHHHHHHHHHHcCCcch---HHHHHHHhCCChhHHHHHHHHHH
Confidence 3566699888888888888887654 55799999999999999998753
No 34
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=82.54 E-value=0.87 Score=33.33 Aligned_cols=42 Identities=14% Similarity=0.271 Sum_probs=29.4
Q ss_pred CCcCCHHHHHHHHHHhhhh-cCCCHHHHHHHHHHhCCChHHHhhhhH
Q 019540 61 KRRLSVDQVKALEKNFEVE-NKLEPERKVKLAQELGLQPRQVAVWFQ 106 (339)
Q Consensus 61 RrRfT~~Ql~~LE~~F~~~-~yPs~~~ReeLA~~LgLserQVqVWFQ 106 (339)
|++|+.+.....-..+... .. ...++|.++|+++..|..|.+
T Consensus 3 rk~Ys~EfK~~aV~l~~~~~g~----s~~~vA~~lGIs~~tl~~W~k 45 (89)
T d2jn6a1 3 TKTYSEEFKRDAVALYENSDGA----SLQQIANDLGINRVTLKNWII 45 (89)
T ss_dssp CCCCCHHHHHHHHHHHTTGGGS----CHHHHHHHHTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCC----cHHHHHHHHCCCHHHHHHHHH
Confidence 3458888666554444332 22 245799999999999999975
No 35
>d1ijwc_ a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic}
Probab=69.13 E-value=5.1 Score=26.42 Aligned_cols=41 Identities=15% Similarity=0.272 Sum_probs=33.8
Q ss_pred CCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhH
Q 019540 61 KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQ 106 (339)
Q Consensus 61 RrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQ 106 (339)
++.+|++|++.....+.... + +.+||+.+|++..-|-.||.
T Consensus 3 ~~~lt~~q~~~a~~l~~~G~-s----~~~iA~~~gVSr~TiYry~p 43 (47)
T d1ijwc_ 3 PRAINKHEQEQISRLLEKGH-P----RQQLAIIFGIGVSTLYRYFP 43 (47)
T ss_dssp CCSSCHHHHHHHHHHHHTTC-C----HHHHHHHHTCCHHHHHHHSC
T ss_pred CCcCCHHHHHHHHHHHHCCC-C----HHHHHHHHCcCHHHHHhhCC
Confidence 34499999999999987543 3 77899999999999988873
No 36
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=55.95 E-value=9.8 Score=25.53 Aligned_cols=45 Identities=16% Similarity=0.071 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhh
Q 019540 64 LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113 (339)
Q Consensus 64 fT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~K 113 (339)
+++.|..++.-.|-.. ....++|..+|+++..|+.+...-|.+-|
T Consensus 22 L~~~~r~v~~l~~~~~-----~s~~eIA~~lgis~~tv~~~~~ra~~~Lr 66 (71)
T d1rp3a2 22 LPEREKLVIQLIFYEE-----LPAKEVAKILETSVSRVSQLKAKALERLR 66 (71)
T ss_dssp SCHHHHHHHHHHHTSC-----CCHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhHh-----CCHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 6677777776666433 24568999999999999887764444443
No 37
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=54.89 E-value=11 Score=25.40 Aligned_cols=45 Identities=13% Similarity=-0.065 Sum_probs=31.3
Q ss_pred CCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHhh
Q 019540 64 LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113 (339)
Q Consensus 64 fT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~K 113 (339)
+++.|..++.-.|-... .-.++|..+|+++..|+++.+.-|.+-|
T Consensus 19 Lp~~~r~v~~l~~~~~~-----s~~eIA~~lgis~~tv~~~l~ra~~~Lr 63 (68)
T d1or7a1 19 LPEDLRMAITLRELDGL-----SYEEIAAIMDCPVGTVRSRIFRAREAID 63 (68)
T ss_dssp SCHHHHHHHHHHHTTCC-----CHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCC-----CHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 55666666655554333 2468999999999999999875555444
No 38
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}
Probab=38.91 E-value=14 Score=25.09 Aligned_cols=43 Identities=12% Similarity=0.303 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHhhh-----hcCCCHHHHHHHHHHhCC--ChHHHhhhhH
Q 019540 64 LSVDQVKALEKNFEV-----ENKLEPERKVKLAQELGL--QPRQVAVWFQ 106 (339)
Q Consensus 64 fT~~Ql~~LE~~F~~-----~~yPs~~~ReeLA~~LgL--serQVqVWFQ 106 (339)
+|++|+..|...|.. ..+.+..+...+.+.+|. ++.+|+.||+
T Consensus 2 Ls~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~ 51 (73)
T d2pq3a1 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 51 (73)
T ss_dssp CCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 689999999999974 457788888888888875 5777887775
No 39
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.22 E-value=25 Score=23.77 Aligned_cols=43 Identities=16% Similarity=0.374 Sum_probs=33.9
Q ss_pred CCHHHHHHHHHHhhh-----hcCCCHHHHHHHHHHhCC--ChHHHhhhhH
Q 019540 64 LSVDQVKALEKNFEV-----ENKLEPERKVKLAQELGL--QPRQVAVWFQ 106 (339)
Q Consensus 64 fT~~Ql~~LE~~F~~-----~~yPs~~~ReeLA~~LgL--serQVqVWFQ 106 (339)
+|.+|+..|...|.. ..+.+..+...+.+.+|. +...|+.||+
T Consensus 4 lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~ 53 (77)
T d1f54a_ 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMN 53 (77)
T ss_dssp CCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 789999999999874 447888888887888875 5667777774
No 40
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=35.85 E-value=5.2 Score=26.01 Aligned_cols=31 Identities=16% Similarity=0.221 Sum_probs=24.4
Q ss_pred hhhhcCCCHHHHHHHHHHhCCChHHHhhhhH
Q 019540 76 FEVENKLEPERKVKLAQELGLQPRQVAVWFQ 106 (339)
Q Consensus 76 F~~~~yPs~~~ReeLA~~LgLserQVqVWFQ 106 (339)
|-..++-.+....+||+.+||+++.+..+|+
T Consensus 11 yI~~~~~~~~tl~~lA~~~~~s~~~l~r~Fk 41 (54)
T d1bl0a1 11 WIEDNLESPLSLEKVSERSGYSKWHLQRMFK 41 (54)
T ss_dssp HHHTTTTSCCCCHHHHHHSSSCHHHHHHHHH
T ss_pred HHHhccCCCCCHHHHHHHHCcCHHHHHHHHH
Confidence 3344555556678999999999999999996
No 41
>d1fsea_ a.4.6.2 (A:) Germination protein GerE {Bacillus subtilis [TaxId: 1423]}
Probab=32.36 E-value=18 Score=24.31 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=29.4
Q ss_pred CcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhh
Q 019540 62 RRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNR 108 (339)
Q Consensus 62 rRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNR 108 (339)
..+|+.|.++|.-.-+ . ..-.++|..+|++++-|+.-.++=
T Consensus 3 p~LT~rE~~vl~l~~~--G----~s~~eIA~~L~is~~TV~~~~~~i 43 (67)
T d1fsea_ 3 PLLTKREREVFELLVQ--D----KTTKEIASELFISEKTVRNHISNA 43 (67)
T ss_dssp CCCCHHHHHHHHHHTT--T----CCHHHHHHHHTSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHc--c----CCHHHHHHHHCCCHHHHHHHHHHH
Confidence 3589999999855322 1 234688999999999998765533
No 42
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=29.78 E-value=45 Score=22.77 Aligned_cols=44 Identities=11% Similarity=0.247 Sum_probs=33.8
Q ss_pred cCCHHHHHHHHHHhhh-----hcCCCHHHHHHHHHHhCC--ChHHHhhhhH
Q 019540 63 RLSVDQVKALEKNFEV-----ENKLEPERKVKLAQELGL--QPRQVAVWFQ 106 (339)
Q Consensus 63 RfT~~Ql~~LE~~F~~-----~~yPs~~~ReeLA~~LgL--serQVqVWFQ 106 (339)
.+|.+|+..|...|.. ..+.+..+...+.+.+|. ++..|+-+|.
T Consensus 7 ~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~ 57 (81)
T d1avsa_ 7 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIE 57 (81)
T ss_dssp HBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHH
Confidence 3899999999999875 457888888888888875 5556666554
No 43
>d1iufa1 a.4.1.7 (A:-2-75) Ars-binding protein 1, ABP1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=25.02 E-value=35 Score=24.70 Aligned_cols=30 Identities=20% Similarity=0.377 Sum_probs=22.2
Q ss_pred CCCCCcCCHHHHHHHHHHh-hhhcCCCHHHH
Q 019540 58 SEKKRRLSVDQVKALEKNF-EVENKLEPERK 87 (339)
Q Consensus 58 krKRrRfT~~Ql~~LE~~F-~~~~yPs~~~R 87 (339)
+.+|+.++.+|...|...+ ..+++|+....
T Consensus 6 ~~~R~aIs~~qK~ALR~~~~~~~~~~sqk~l 36 (78)
T d1iufa1 6 KIKRRAITEHEKRALRHYFFQLQNRSGQQDL 36 (78)
T ss_dssp CCSSSCCCSHHHHHHHHHHHSSSSCCCHHHH
T ss_pred ccccccCCHHHHHHHHHHHHhcCCCccHHHH
Confidence 3445559999999999995 67777765533
No 44
>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=24.63 E-value=73 Score=21.85 Aligned_cols=43 Identities=16% Similarity=0.332 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHHhh----h--hcCCCHHHHHHHHHHhCC--ChHHHhhhhH
Q 019540 64 LSVDQVKALEKNFE----V--ENKLEPERKVKLAQELGL--QPRQVAVWFQ 106 (339)
Q Consensus 64 fT~~Ql~~LE~~F~----~--~~yPs~~~ReeLA~~LgL--serQVqVWFQ 106 (339)
+|.+|+..+...|. . +.+.+..+...+.+.+|+ ++.+|+.+|.
T Consensus 9 ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~ 59 (82)
T d1wrka1 9 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMID 59 (82)
T ss_dssp CCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 78999999999985 2 348888888888889885 5666777664
No 45
>d1l3la1 a.4.6.2 (A:170-234) Quorum-sensing transcription factor TraR, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}
Probab=23.41 E-value=30 Score=23.14 Aligned_cols=44 Identities=16% Similarity=0.108 Sum_probs=30.4
Q ss_pred cCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHh
Q 019540 63 RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARW 112 (339)
Q Consensus 63 RfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~ 112 (339)
.+|+.|.++|.-.-+ ...-.++|.+|+++++-|+.-.++=+.|.
T Consensus 4 ~Lt~rE~~vl~l~~~------G~s~~eIA~~l~iS~~TV~~~~~~i~~Kl 47 (65)
T d1l3la1 4 WLDPKEATYLRWIAV------GKTMEEIADVEGVKYNSVRVKLREAMKRF 47 (65)
T ss_dssp CCCHHHHHHHHHHTT------TCCHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHh------cCCHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 478888888844332 12346899999999999988665444443
No 46
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus [TaxId: 271]}
Probab=21.39 E-value=44 Score=22.49 Aligned_cols=38 Identities=11% Similarity=0.114 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHh
Q 019540 64 LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVA 102 (339)
Q Consensus 64 fT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVq 102 (339)
++..+..+|...|...... +....++|..+|++..+|+
T Consensus 9 L~~rer~Ii~~ryGl~~~~-~~tl~eIa~~lgiS~erVr 46 (61)
T d1ku3a_ 9 LSEREAMVLKMRKGLIDGR-EHTLEEVGAYFGVTRERIR 46 (61)
T ss_dssp SCHHHHHHHHHHHTTTTSS-CCCHHHHHHHHTCCHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCC-CCCHHHHHHHHCCCHHHHH
Confidence 7889999999999765432 2456789999999998874
No 47
>d1dpua_ a.4.5.16 (A:) C-terminal domain of RPA32 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.13 E-value=29 Score=24.30 Aligned_cols=38 Identities=18% Similarity=0.144 Sum_probs=28.0
Q ss_pred CCHHHHHHHHHHhhhhcCCCHHHHHHHHHHh-CCChHHHh
Q 019540 64 LSVDQVKALEKNFEVENKLEPERKVKLAQEL-GLQPRQVA 102 (339)
Q Consensus 64 fT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~L-gLserQVq 102 (339)
+++.|..+|.-. +.++.+..--+.+|+++| ||+..+|+
T Consensus 4 Ls~~q~~V~~~i-~s~~~~eGi~~~el~~~l~~~~~~~i~ 42 (69)
T d1dpua_ 4 LTVAQNQVLNLI-KACPRPEGLNFQDLKNQLKHMSVSSIK 42 (69)
T ss_dssp SCHHHHHHHHHH-HHCCCTTTEEHHHHHHHSTTSCHHHHH
T ss_pred CCHHHHHHHHHH-HhCCCccCcCHHHHHHHccCCCHHHHH
Confidence 678888888544 555555556678899988 79988875
No 48
>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.13 E-value=52 Score=23.17 Aligned_cols=43 Identities=12% Similarity=0.095 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHHhhh-----hcCCCHHHHHHHHHHhCCChHHHhhhhH
Q 019540 64 LSVDQVKALEKNFEV-----ENKLEPERKVKLAQELGLQPRQVAVWFQ 106 (339)
Q Consensus 64 fT~~Ql~~LE~~F~~-----~~yPs~~~ReeLA~~LgLserQVqVWFQ 106 (339)
+|+++...++..|.. ..+.+..+-..+..++||+...++.+|.
T Consensus 4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~~i~~ 51 (95)
T d1c07a_ 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWS 51 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHHHHHH
Confidence 678888899999975 3367888888888888999888877664
No 49
>d2auwa1 a.35.1.10 (A:88-154) Hypothetical protein NE0471 C-terminal domain {Nitrosomonas europaea [TaxId: 915]}
Probab=20.70 E-value=20 Score=24.96 Aligned_cols=24 Identities=21% Similarity=0.332 Sum_probs=21.0
Q ss_pred HHHHHHHhCCChHHHhhhhHhhHH
Q 019540 87 KVKLAQELGLQPRQVAVWFQNRRA 110 (339)
Q Consensus 87 ReeLA~~LgLserQVqVWFQNRRa 110 (339)
..+||..||++.+-|..|=+++|.
T Consensus 17 Q~elA~~LGvs~~ti~~yE~G~r~ 40 (67)
T d2auwa1 17 LTTAAEALGISRRMVSYYRTAHKI 40 (67)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSSC
T ss_pred HHHHHHHhCCCHHHHHHHHcCCCC
Confidence 458999999999999999887764
No 50
>d1s7oa_ a.4.13.3 (A:) Hypothetical protein SPy1201 {Streptococcus pyogenes [TaxId: 1314]}
Probab=20.27 E-value=1.5e+02 Score=21.64 Aligned_cols=44 Identities=16% Similarity=0.201 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHHhhhhHhhHHHh
Q 019540 64 LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARW 112 (339)
Q Consensus 64 fT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQVqVWFQNRRaK~ 112 (339)
+++.|..++.-.|...- .-.++|..+|+++..|+.=...-|.+.
T Consensus 17 Lp~~qR~v~~L~y~~~l-----s~~EIA~~lgiS~~aV~~~l~RA~~~L 60 (106)
T d1s7oa_ 17 LTDKQMNYIELYYADDY-----SLAEIADEFGVSRQAVYDNIKRTEKIL 60 (106)
T ss_dssp SCHHHHHHHHHHHHTCC-----CHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCC-----CHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 67777777776664433 245899999999999998765444433
No 51
>d2cpra1 a.60.8.4 (A:483-595) Exosome component 10, EXOSC10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.25 E-value=73 Score=23.31 Aligned_cols=33 Identities=24% Similarity=0.220 Sum_probs=27.6
Q ss_pred CCcCCHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCChHHH
Q 019540 61 KRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQV 101 (339)
Q Consensus 61 RrRfT~~Ql~~LE~~F~~~~yPs~~~ReeLA~~LgLserQV 101 (339)
..++.+.|+.+|+..+ ..|+++|++.++++..|
T Consensus 17 ~~~l~~~qlavl~~L~--------~wRe~~Ar~~d~p~~~V 49 (113)
T d2cpra1 17 KKHLNTQQLTAFQLLF--------AWRDKTARREDESYGYV 49 (113)
T ss_dssp SSCCCHHHHHHHHHHH--------HHHHHHHHHTTCCHHHH
T ss_pred ccCCCHHHHHHHHHHH--------HHHHHHHHHhCCCccee
Confidence 3459999999998887 68999999999988665
Done!