BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019542
(339 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
gi|222858766|gb|EEE96313.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/339 (66%), Positives = 256/339 (75%), Gaps = 15/339 (4%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFARNPYFSIHP-RPRPIKLHLSDS-SLSSKGFS 58
MS+++A KPL + T L S PS FA P P RP KL LS S SLS
Sbjct: 1 MSAASAFTFKPL--LMAETCLCSLPSTFASKPPLKSLPISQRPSKLQLSYSHSLSP---- 54
Query: 59 FKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEG 118
F LK TH S FV QTSDWA Q E+ DNTTITL + ++E E NW N+ +++ EG
Sbjct: 55 FSLKPKTHLSLTIPFVTQTSDWAQQGEE-DNTTITLTESEQEEQGES-NWVNEESNDFEG 112
Query: 119 NLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAM 178
+ +W E EGED R E + EE FVEPPE+AK+FVGNLPYDVDSEKLAM
Sbjct: 113 KVPEW-EAEGEDAAATEAIRGEGESGD----EEGFVEPPEEAKIFVGNLPYDVDSEKLAM 167
Query: 179 LFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 238
LFE+AGTVEIAEVIYNRETD SRGFGFVTMSTVEE+EKAVEM HRYD+DGR LTVNKAAP
Sbjct: 168 LFEQAGTVEIAEVIYNRETDTSRGFGFVTMSTVEESEKAVEMLHRYDLDGRFLTVNKAAP 227
Query: 239 RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 298
RG++PER PRV EPG+RIYVGNLPW+VD+ RLEQ+FSEHGKVV+ARVV+DRET RSRGFG
Sbjct: 228 RGSRPERPPRVSEPGYRIYVGNLPWDVDSGRLEQIFSEHGKVVSARVVFDRETNRSRGFG 287
Query: 299 FVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
FVTMS+E+ELNDAIAALDGQNLDGR IRVNVAE+R RR+
Sbjct: 288 FVTMSTESELNDAIAALDGQNLDGRPIRVNVAEERPRRT 326
>gi|225456840|ref|XP_002278832.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
Length = 327
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/341 (65%), Positives = 255/341 (74%), Gaps = 16/341 (4%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFARNPYFSIHPRP--RPIKLHLSDSSLSSKGFS 58
MSS+T +LKP S + S +S P+IF+ S P P +PIKL LS S S S
Sbjct: 1 MSSATHHLLKPFS--IPNGSPISLPTIFSTKTPHSYLPIPPHKPIKLLLSCSQSSLFSPS 58
Query: 59 FKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEG 118
LK T SS TFVAQTSDWA QEED T+ +E+EQEE WEN+ + +
Sbjct: 59 LFLKSKTLSSSVVTFVAQTSDWAQQEEDN---TVIIEEEQEEKV----TWENEEVEGPDA 111
Query: 119 NLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAM 178
SDW E EGE V EA + E+ + EPPE+AK+FVGNLPYDVDSE+LA
Sbjct: 112 QASDW-ESEGEGAVTEAISDDGVVDDG----EDSYSEPPEEAKVFVGNLPYDVDSERLAR 166
Query: 179 LFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 238
LFE+AG VEIAEVIYNRETDRSRGFGFV+MSTVEEAEKAV+MFHRY++DGRLLTVNKAAP
Sbjct: 167 LFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNKAAP 226
Query: 239 RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 298
RG+QPER PRVFEP FR+YVGNLPW+VD+ARLEQVFSEHGKVV ARVV+DRETGRSRGFG
Sbjct: 227 RGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFG 286
Query: 299 FVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
FVTMSS+TEL DAIAA DGQ LDGR IRVNVAE+R RRS+F
Sbjct: 287 FVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEERPRRSAF 327
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223550401|gb|EEF51888.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 319
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/333 (68%), Positives = 262/333 (78%), Gaps = 18/333 (5%)
Query: 7 SVLKPLSSMADSTSLLSPPSIF-ARNPYFSIH-PRPRPIKLHLSDSSLSSKGFSFKLKKT 64
+ KPLS MADS LLS PSIF ++ PY S+ P PIKLH++ S S LK
Sbjct: 2 TTFKPLS-MADSC-LLSLPSIFTSKPPYLSLSVPSRPPIKLHITQSYSS-------LKSK 52
Query: 65 THFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWG 124
THFSS VAQTSDWA QEE+ + T+TL + ++E E + ETE +SDW
Sbjct: 53 THFSSLVPLVAQTSDWAQQEEN--DATVTLAESEQEQEWEG----QESETETEARVSDW- 105
Query: 125 EPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAG 184
+ EGE V+ +EE EG EE F EPPEDAK+FVGNLPYDVDS+KLAMLFE+AG
Sbjct: 106 DSEGESAAVDGQGEEEEEVFEGSEPEEAFEEPPEDAKIFVGNLPYDVDSQKLAMLFEQAG 165
Query: 185 TVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 244
TVEIAEVIYNRETD SRGFGFV+MSTVEEAEKAVEMFHR+D+DGRLLTVNKAAPRG++PE
Sbjct: 166 TVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKAVEMFHRHDLDGRLLTVNKAAPRGSRPE 225
Query: 245 RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 304
R PRVFEPG+RIYVGNLPW+VDNARLEQ+FSEHGKVV+ARVVYDR+TGRSRGFGFVTMS+
Sbjct: 226 RPPRVFEPGYRIYVGNLPWDVDNARLEQIFSEHGKVVDARVVYDRDTGRSRGFGFVTMST 285
Query: 305 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
ETELNDAIAALDG++LDGRAIRVNVAE R RR+
Sbjct: 286 ETELNDAIAALDGRSLDGRAIRVNVAEQRPRRN 318
>gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/341 (63%), Positives = 247/341 (72%), Gaps = 37/341 (10%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFARNPYFSIHPRP--RPIKLHLSDSSLSSKGFS 58
MSS+T +LKP S + S +S P+IF+ S P P +PIKL LS S S S
Sbjct: 1 MSSATHHLLKPFS--IPNGSPISLPTIFSTKTPHSYLPIPPHKPIKLLLSCSQSSLFSPS 58
Query: 59 FKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEG 118
LK T SS TFVAQTSDWA QEED T+ +E+EQEE WEN+ A +G
Sbjct: 59 LFLKSKTLSSSVVTFVAQTSDWAQQEEDN---TVIIEEEQEEKV----TWENEEAISDDG 111
Query: 119 NLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAM 178
+ D E+ + EPPE+AK+FVGNLPYDVDSE+LA
Sbjct: 112 VVDD--------------------------GEDSYSEPPEEAKVFVGNLPYDVDSERLAR 145
Query: 179 LFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 238
LFE+AG VEIAEVIYNRETDRSRGFGFV+MSTVEEAEKAV+MFHRY++DGRLLTVNKAAP
Sbjct: 146 LFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNKAAP 205
Query: 239 RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 298
RG+QPER PRVFEP FR+YVGNLPW+VD+ARLEQVFSEHGKVV ARVV+DRETGRSRGFG
Sbjct: 206 RGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFG 265
Query: 299 FVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
FVTMSS+TEL DAIAA DGQ LDGR IRVNVAE+R RRS+F
Sbjct: 266 FVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEERPRRSAF 306
>gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis vinifera]
Length = 1122
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/274 (70%), Positives = 222/274 (81%), Gaps = 12/274 (4%)
Query: 66 HFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGE 125
+++ TFVAQTSDWA QEED T+ +E+EQEE + WEN+ + + SDW E
Sbjct: 861 QYNAEVTFVAQTSDWAQQEEDN---TVIIEEEQEE----KVTWENEEVEGPDAQASDW-E 912
Query: 126 PEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGT 185
EGE V EA + E+ + EPPE+AK+FVGNLPYDVDSE+LA LFE+AG
Sbjct: 913 SEGEGAVTEAISDDGVVDDG----EDSYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGV 968
Query: 186 VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 245
VEIAEVIYNRETDRSRGFGFV+MSTVEEAEKAV+MFHRY++DGRLLTVNKAAPRG+QPER
Sbjct: 969 VEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPER 1028
Query: 246 APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 305
PRVFEP FR+YVGNLPW+VD+ARLEQVFSEHGKVV ARVV+DRETGRSRGFGFVTMSS+
Sbjct: 1029 PPRVFEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQ 1088
Query: 306 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
TEL DAIAA DGQ LDGR IRVNVAE+R RRS+F
Sbjct: 1089 TELEDAIAATDGQTLDGRTIRVNVAEERPRRSAF 1122
>gi|224133740|ref|XP_002321649.1| predicted protein [Populus trichocarpa]
gi|222868645|gb|EEF05776.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/325 (64%), Positives = 240/325 (73%), Gaps = 37/325 (11%)
Query: 19 TSLLSPPSIFARNPYFSIHPRP---RPIKLHLSDS-SLSSKGFSFKLKKTTHFSSFTTFV 74
T + S PSIF P + P P RPIKL LS S SLS+ +K TH S FV
Sbjct: 4 TCICSFPSIFTSKP--PLKPLPISHRPIKLQLSYSHSLST----LSVKPKTHLSLTIPFV 57
Query: 75 AQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTVVE 134
AQTSDWA QEE+ +NTTITL + +SDW E EGED
Sbjct: 58 AQTSDWAQQEEE-NNTTITLTE-----------------------VSDW-EAEGEDAA-- 90
Query: 135 AGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYN 194
A E + GE +EE FVEPPE+AK++VGNLPYDV SEKLAMLF++AGTVEI+EVIYN
Sbjct: 91 ASETEAVRGEGERGDEEGFVEPPEEAKIYVGNLPYDVTSEKLAMLFDQAGTVEISEVIYN 150
Query: 195 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF 254
ETD SRGFGFVTMSTVEE++KA+EMF+RY++DGRLLTVNKAAPRG++PER PRV EP +
Sbjct: 151 TETDTSRGFGFVTMSTVEESDKAIEMFNRYNLDGRLLTVNKAAPRGSRPERPPRVSEPSY 210
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
RIYVGNLPW VD+ RLE+VFSEHGKVV+A+VV D ETGRSRGFGFVTMSSE+ELNDAIAA
Sbjct: 211 RIYVGNLPWGVDSGRLEEVFSEHGKVVSAQVVSDWETGRSRGFGFVTMSSESELNDAIAA 270
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSSF 339
LDGQ LDGRAIRVNVA +R RRSSF
Sbjct: 271 LDGQELDGRAIRVNVAAERPRRSSF 295
>gi|449440612|ref|XP_004138078.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 330
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 217/342 (63%), Positives = 253/342 (73%), Gaps = 21/342 (6%)
Query: 2 SSSTASVLKPLSSMADSTSLLSPPSIFARNPYFSIHPRP-RPIKLHLSDSSLSSKGFSFK 60
SSS S+ KPLS + LS PS+F P + P + I HLS SS S G
Sbjct: 3 SSSATSLFKPLSK--PDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSYSSG-FSP 59
Query: 61 LKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEE--PNWENQGADETEG 118
KK H S VAQTSDWA ++ D TI + + +ENG EE P+WEN+ ETE
Sbjct: 60 SKKKPHLPS----VAQTSDWAQED---DTITIDPKLDNDENGGEEGGPHWENEELSETES 112
Query: 119 NLSDW---GEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEK 175
+SDW GE G + V E ++E GE+G +E EP EDAKLFVGNLPYD+DSEK
Sbjct: 113 RISDWEGEGEDGGSEAEVGGDEEEDEEGEQGPYE-----EPNEDAKLFVGNLPYDIDSEK 167
Query: 176 LAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK 235
LAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV+ F+RYD+ GRLLTVNK
Sbjct: 168 LAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYDLSGRLLTVNK 227
Query: 236 AAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 295
AAPRG++ ER PR F+P FRIYVGNLPW+VDN RLEQ+FSEHGKVV+ARV+YDR++GRSR
Sbjct: 228 AAPRGSRQEREPRPFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSR 287
Query: 296 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
GFGFVTM+ ET +NDAIAALDGQ+LDGRAIRVNVAE+R RR+
Sbjct: 288 GFGFVTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRN 329
>gi|356508744|ref|XP_003523114.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 305
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/322 (62%), Positives = 219/322 (68%), Gaps = 52/322 (16%)
Query: 20 SLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSFTTFVAQTSD 79
SL SPPS +P+ L S + S L H S T VAQTSD
Sbjct: 34 SLFSPPS--------------KPLTLQFS---CINSSVSLSLAARAHRSPLVTRVAQTSD 76
Query: 80 WADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQ 139
WA QEED T T + E+ QG ET+ LS W EP GED AGE
Sbjct: 77 WAQQEEDD---TATFQDEE------------QGLSETQAGLSSW-EPNGED----AGE-- 114
Query: 140 EESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDR 199
E F EPPE+AKLFVGNLPYDVDS+KLAMLFE+AGTVEIAEVIYNRETD+
Sbjct: 115 -----------ESFAEPPEEAKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQ 163
Query: 200 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP--RVFEPGFRIY 257
SRGFGFVTMSTVEEAE AVE F RYD DGRLLTVNKA+PRGT+PER P FEP IY
Sbjct: 164 SRGFGFVTMSTVEEAENAVEKFSRYDFDGRLLTVNKASPRGTRPERPPPRHSFEPSLSIY 223
Query: 258 VGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDG 317
VGNLPW+VDN RLEQ+FSEHG VVNARVVYDRET RSRGFGFVTMS ETE+ DA+AALDG
Sbjct: 224 VGNLPWDVDNTRLEQIFSEHGNVVNARVVYDRETRRSRGFGFVTMSDETEMKDAVAALDG 283
Query: 318 QNLDGRAIRVNVAEDRQRRSSF 339
Q+LDGR IRV+VAEDR RR SF
Sbjct: 284 QSLDGRPIRVSVAEDRPRRGSF 305
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 205/319 (64%), Positives = 233/319 (73%), Gaps = 24/319 (7%)
Query: 23 SPPSIFARNPYFSIHPRP-RPIKL-HLSDSSLSSKGFSFKLKKTTHFSSFTTFVAQTSDW 80
S P +F+ P P P +PIKL HLS SS S SFK + S TT VAQTSDW
Sbjct: 4 SSPILFSSKPPCPFLPIPSKPIKLIHLSTSSSSWV--SFKKSPSPSSRSLTTLVAQTSDW 61
Query: 81 ADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQE 140
A QEED + TL + E E GA++ GE G D VE GE
Sbjct: 62 AQQEEDSNVAEATLSDWEGEGEGEGEEQTESGAED--------GEESGGDGFVEGGE--- 110
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRS 200
E+ + PPE+AKLFVGNLPYDVD + LA LF++AGTVE+AEVIYNRETD+S
Sbjct: 111 ---------EDSYPLPPEEAKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQS 161
Query: 201 RGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGN 260
RGFGFVTMSTVEEAEKAVEMF+RYDI+GRLLTVNKAAPRG + +R PR FEP FR+YVGN
Sbjct: 162 RGFGFVTMSTVEEAEKAVEMFNRYDINGRLLTVNKAAPRGARVDRPPRAFEPAFRMYVGN 221
Query: 261 LPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL 320
LPW+VD+ARLEQVFSEHGKVV ARVVYDRETGRSRGFGFVTMS++TEL+DAIAALDGQ+L
Sbjct: 222 LPWQVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAALDGQSL 281
Query: 321 DGRAIRVNVAEDRQRRSSF 339
DGRAIRVNVAEDR RR+SF
Sbjct: 282 DGRAIRVNVAEDRPRRASF 300
>gi|225452270|ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 312
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 207/343 (60%), Positives = 251/343 (73%), Gaps = 35/343 (10%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFA-RNPYFSIHPRPRPIKL-HLSDSSLSSKGFS 58
M+SS A +LKP S MA+S P ++F + P+ + P+P++L HLS S SS
Sbjct: 1 MASSNA-LLKPFS-MAESCLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSW--- 55
Query: 59 FKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEG 118
LK T ++ FVAQTSDWA QEE+++ +T W+++G +E E
Sbjct: 56 VSLKTKTSPTTLVPFVAQTSDWAQQEEEEEKGGLT--------------WDSEGGEEIEA 101
Query: 119 NLSD--WGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKL 176
+ S+ W E GEE E+ + EPPE+AKLFVGNLPYD+DSEKL
Sbjct: 102 SGSEEAWEG------------EVGEDGEESEGSEDTYSEPPEEAKLFVGNLPYDIDSEKL 149
Query: 177 AMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 236
A LF++AG VEIAEVIYNRETD+SRGFGF+TMSTVEEAEKAVEMF+RYD++GR LTVNKA
Sbjct: 150 AQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKA 209
Query: 237 APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 296
APRG++PER P+ FEP FRIYVGNLPW+VD+ARLEQVFSEHGKVV+ARVVYDR+T RSRG
Sbjct: 210 APRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRG 269
Query: 297 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
FGFVTMSSETELNDAIAALDGQ+LDGRAIRVNVAE+R RR S+
Sbjct: 270 FGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRRGSY 312
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 194/326 (59%), Positives = 239/326 (73%), Gaps = 38/326 (11%)
Query: 12 LSSMADSTSLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSFT 71
+S+ ++SL SP + ++ +FSI +P K+ LS S S + SF L+K T S+
Sbjct: 1 MSNTCFTSSLHSPSILIPKSLFFSIPSKP--TKIPLSLSLSSPQLSSFSLQKQTLSSTVV 58
Query: 72 TFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDT 131
T+VAQTS+W D++ T LE E ++EP+W N TE +SD+G EGE
Sbjct: 59 TYVAQTSEW-----DQEGTNAVLE----EGSDQEPSWGN-----TEAQVSDFGSDEGEG- 103
Query: 132 VVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEV 191
F EPPEDAKLFVGNLP+DVDSEKLA +FE AG VEIAEV
Sbjct: 104 ---------------------FQEPPEDAKLFVGNLPFDVDSEKLAQIFEGAGVVEIAEV 142
Query: 192 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 251
IYNRETDRSRGFGFVTMSTVEEAEKAVE++H+++++GR LTVNKAAPRG++PERAPR +E
Sbjct: 143 IYNRETDRSRGFGFVTMSTVEEAEKAVELYHKFEVNGRFLTVNKAAPRGSRPERAPREYE 202
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P FR+YVGNLPW+VD+ARLEQVFSEHGKV++ARVV DRETGRSRGF FVTM+SE+E+N+A
Sbjct: 203 PSFRVYVGNLPWDVDDARLEQVFSEHGKVLSARVVSDRETGRSRGFAFVTMASESEMNEA 262
Query: 312 IAALDGQNLDGRAIRVNVAEDRQRRS 337
I ALDGQ L+GRAIRVNVAE+R RRS
Sbjct: 263 IGALDGQTLEGRAIRVNVAEERPRRS 288
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
gi|297313481|gb|EFH43904.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 208/344 (60%), Positives = 240/344 (69%), Gaps = 52/344 (15%)
Query: 2 SSSTASVLKPLSSMADSTS--LLSPPSIFARNPYF-----SIHPRPRPIKLHLSDSSLSS 54
SS S LKPL+ MADS+S + S PSI + ++ I L LS S S
Sbjct: 3 SSIVTSSLKPLA-MADSSSSTIFSHPSISSTISSSRIRCSNVSLLTGHINLPLSFSRFSR 61
Query: 55 KGFSFKLKKTTHF--SSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQG 112
FS LK TH S F +FVAQTSDWA E+ ++ +E E E ++E+Q
Sbjct: 62 --FSLSLKSKTHLKKSPFVSFVAQTSDWA---EEGGEGSVAVE-------ENEDSFESQD 109
Query: 113 ADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVD 172
A EG++S E EF EP E+AKLFVGNL YDVD
Sbjct: 110 A---EGDVS---------------------------EGAEFPEPSEEAKLFVGNLAYDVD 139
Query: 173 SEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 232
S+ LAMLFE+AGTVEIAEVIYNRETD+SRGFGFVTMSTVEEAE AVE F+RYD++GRLLT
Sbjct: 140 SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLT 199
Query: 233 VNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
VNKAAPRG++PERAPRV+EP FR+YVGNLPW+VDN RLEQVFSEHGKVV ARVVYDRETG
Sbjct: 200 VNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETG 259
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
RSRGFGFVTMS+E ELNDAIAALDGQN++GRAIRVNVAE+R RR
Sbjct: 260 RSRGFGFVTMSNENELNDAIAALDGQNMEGRAIRVNVAEERPRR 303
>gi|449501439|ref|XP_004161367.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like, partial
[Cucumis sativus]
Length = 324
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 204/336 (60%), Positives = 236/336 (70%), Gaps = 35/336 (10%)
Query: 20 SLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKL-------------KKTTH 66
S L P I A FS++ P H+ SSL K F L KK H
Sbjct: 5 SSLYPSRILA----FSLYLLYSPADPHIL-SSLPFKFIPFHLSSSSSYSSGFSPSKKKPH 59
Query: 67 FSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEE--PNWENQGADETEGNLSDWG 124
S VAQTSDWA ++ D TI + + +ENG EE P+WEN+ ETE +SDW
Sbjct: 60 LPS----VAQTSDWAQED---DTITIDPKLDNDENGGEEGGPHWENEELSETESRISDWE 112
Query: 125 EPEGEDTVVEAGERQEESGE---EGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFE 181
+ EE E +G +EE P EDAKLFVGNLPYD+DSEKLAMLFE
Sbjct: 113 GEGEDGGSEAEVGGDEEEDEEGEQGPYEE-----PNEDAKLFVGNLPYDIDSEKLAMLFE 167
Query: 182 KAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 241
KAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV+ F+RYD+ GRLLTVNKAAPRG+
Sbjct: 168 KAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRGS 227
Query: 242 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 301
+ ER PR F+P FRIYVGNLPW+VDN RLEQ+FSEHGKVV+ARV+YDR++GRSRGFGFVT
Sbjct: 228 RQEREPRPFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVT 287
Query: 302 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
M+ ET +NDAIAALDGQ+LDGRAIRVNVAE+R RR+
Sbjct: 288 MADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRN 323
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis thaliana]
gi|23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana]
Length = 329
Score = 353 bits (905), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 204/342 (59%), Positives = 244/342 (71%), Gaps = 19/342 (5%)
Query: 2 SSSTASVLKPLSSMADSTS--LLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSF 59
SS S LKPL+ MADS+S + S PSI + I + + LS S
Sbjct: 3 SSIVTSSLKPLA-MADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVSL 61
Query: 60 KLKKTTHF--SSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETE 117
LK TH S F +FVAQTSDWA E+ ++ +E E E + E+Q D +E
Sbjct: 62 SLKTKTHLKKSPFVSFVAQTSDWA---EEGGEGSVAVE-------ETENSLESQ--DVSE 109
Query: 118 GNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLA 177
G+ S+ EG+ V E E + + E V E EF EP E+AKLFVGNL YDV+S+ LA
Sbjct: 110 GDESEGDASEGD--VSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALA 167
Query: 178 MLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA 237
MLFE+AGTVEIAEVIYNRETD+SRGFGFVTMS+V+EAE AVE F+RYD++GRLLTVNKAA
Sbjct: 168 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAA 227
Query: 238 PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 297
PRG++PERAPRV+EP FR+YVGNLPW+VDN RLEQ+FSEHGKVV ARVVYDRETGRSRGF
Sbjct: 228 PRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGF 287
Query: 298 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
GFVTMS ELN+AI+ALDGQNL+GRAIRVNVAE+R R +
Sbjct: 288 GFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRHGY 329
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
gi|464662|sp|Q04836.1|ROC3_ARATH RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein 1/2/3; Short=AtRBP33; AltName:
Full=RNA-binding protein RNP-T; AltName:
Full=RNA-binding protein cp31; Flags: Precursor
gi|16490|emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana]
gi|387569|gb|AAA32860.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
gi|475718|gb|AAA18378.1| RNA-binding protein 1 [Arabidopsis thaliana]
gi|4220513|emb|CAA22986.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|7269328|emb|CAB79387.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|332659554|gb|AEE84954.1| ribonucleoprotein [Arabidopsis thaliana]
gi|737169|prf||1921382A RNA-binding protein
Length = 329
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 204/342 (59%), Positives = 244/342 (71%), Gaps = 19/342 (5%)
Query: 2 SSSTASVLKPLSSMADSTS--LLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSF 59
SS S LKPL+ MADS+S + S PSI + I + + LS S
Sbjct: 3 SSIVTSSLKPLA-MADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVSL 61
Query: 60 KLKKTTHF--SSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETE 117
LK TH S F +FVAQTSDWA E+ ++ +E E E + E+Q D +E
Sbjct: 62 SLKTKTHLKKSPFVSFVAQTSDWA---EEGGEGSVAVE-------ETENSLESQ--DVSE 109
Query: 118 GNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLA 177
G+ S+ EG+ V E E + + E V E EF EP E+AKLFVGNL YDV+S+ LA
Sbjct: 110 GDESEGDASEGD--VSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALA 167
Query: 178 MLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA 237
MLFE+AGTVEIAEVIYNRETD+SRGFGFVTMS+V+EAE AVE F+RYD++GRLLTVNKAA
Sbjct: 168 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAA 227
Query: 238 PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 297
PRG++PERAPRV+EP FR+YVGNLPW+VDN RLEQ+FSEHGKVV ARVVYDRETGRSRGF
Sbjct: 228 PRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGF 287
Query: 298 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
GFVTMS ELN+AI+ALDGQNL+GRAIRVNVAE+R R +
Sbjct: 288 GFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 329
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum crystallinum]
Length = 306
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/340 (59%), Positives = 244/340 (71%), Gaps = 38/340 (11%)
Query: 1 MSSSTAS-VLKPLSSMADS-TSLLSPPSIF-ARNPYFSIHPRPRPIKLHLSDSSLSSKGF 57
MSS+TA+ LK LS + T+ L PSIF ++ FSI +P KL+LS S S
Sbjct: 1 MSSATANPCLKTLSLSHNCFTTSLYTPSIFNPKSHNFSIPLKP--TKLNLSISVFSP--- 55
Query: 58 SFKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETE 117
F +K+ S+ ++VAQTSDW D++++ L+ EQ+ G W Q ++E
Sbjct: 56 -FSPQKS---STIVSYVAQTSDW-----DQESSNALLDDEQQVGGA---TWGTQNFGDSE 103
Query: 118 GNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLA 177
+S G EE E+G F EPPE+AKLFVGNLPYDVDSE+LA
Sbjct: 104 PQVSG------------VGNEDEEESEQG------FSEPPEEAKLFVGNLPYDVDSERLA 145
Query: 178 MLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA 237
+F+ AG VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM + +D++GRLLTVNKAA
Sbjct: 146 QIFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMLNGFDMNGRLLTVNKAA 205
Query: 238 PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 297
PRG++PER PR FEP R+YVGNLPW+VDNARLEQVFSEHGKV++ARVV DRETGRSRGF
Sbjct: 206 PRGSRPERPPREFEPSCRVYVGNLPWDVDNARLEQVFSEHGKVLSARVVSDRETGRSRGF 265
Query: 298 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
GFV+M+SE+E+NDAIAALDGQ LDGRAIRVNVAE+R RR+
Sbjct: 266 GFVSMASESEMNDAIAALDGQTLDGRAIRVNVAEERPRRA 305
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 187/290 (64%), Positives = 221/290 (76%), Gaps = 16/290 (5%)
Query: 52 LSSKGFSFKLKKTTHF--SSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWE 109
LS S LK TH S F +FVAQTSDWA E+ ++ +E E E + E
Sbjct: 40 LSFSRVSLSLKTKTHLKKSPFVSFVAQTSDWA---EEGGEGSVAVE-------ETENSLE 89
Query: 110 NQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPY 169
+Q D +EG+ S+ EG+ V E E + + E V E EF EP E+AKLFVGNL Y
Sbjct: 90 SQ--DVSEGDESEGDASEGD--VSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAY 145
Query: 170 DVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGR 229
DV+S+ LAMLFE+AGTVEIAEVIYNRETD+SRGFGFVTMS+V+EAE AVE F+RYD++GR
Sbjct: 146 DVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGR 205
Query: 230 LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDR 289
LLTVNKAAPRG++PERAPRV+EP FR+YVGNLPW+VDN RLEQ+FSEHGKVV ARVVYDR
Sbjct: 206 LLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDR 265
Query: 290 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
ETGRSRGFGFVTMS ELN+AI+ALDGQNL+GRAIRVNVAE+R R +
Sbjct: 266 ETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 315
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 202/342 (59%), Positives = 236/342 (69%), Gaps = 34/342 (9%)
Query: 2 SSSTASVLKPLSSMADSTS--LLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSF 59
SS S LKPL+ MADS+S + S PSI + I + + LS S
Sbjct: 3 SSIVTSSLKPLA-MADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVSL 61
Query: 60 KLKKTTHF--SSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETE 117
LK TH S F +FVAQTSDWA EE GE + +ETE
Sbjct: 62 SLKTKTHLKKSPFVSFVAQTSDWA-----------------EEGGEG-----SVAVEETE 99
Query: 118 GNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLA 177
+L E +D V E E + + E V E EF EP E+AKLFVGNL YDV+S+ LA
Sbjct: 100 NSL------ESQD-VSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALA 152
Query: 178 MLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA 237
MLFE+AGTVEIAEVIYNRETD+SRGFGFVTMS+V+EAE AVE F+RYD++GRLLTVNKAA
Sbjct: 153 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAA 212
Query: 238 PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 297
PRG++PERAPRV+EP FR+YVGNLPW+VDN RLEQ+FSEHGKVV ARVVYDRETGRSRGF
Sbjct: 213 PRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGF 272
Query: 298 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
GFVTMS ELN+AI+ALDGQNL+GRAIRVNVAE+R R +
Sbjct: 273 GFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 314
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/312 (60%), Positives = 228/312 (73%), Gaps = 17/312 (5%)
Query: 30 RNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHF--SSFTTFVAQTSDWADQEEDK 87
++P + HP H D SS + K KT H S F +FVAQT DWA E+
Sbjct: 14 KHPSHAKHPDHANDPDHAIDPGHSSHPSNAKHPKT-HLKKSPFVSFVAQTLDWA---EEG 69
Query: 88 DNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGV 147
++ +E E E + E+Q D +EG+ S+ EG+ V E E + + E V
Sbjct: 70 GEGSVAVE-------ETENSLESQ--DVSEGDESEGDASEGD--VSEGDESEGDVSEGAV 118
Query: 148 FEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVT 207
E EF EP E+AKLFVGNL YDV+S+ LAMLFE+AGTVEIAEVIYNRETD+SRGFGFVT
Sbjct: 119 SERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVT 178
Query: 208 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDN 267
MS+V+EAE AVE F+RYD++GRLLTVNKAAPRG++PERAPRV+EP FR+YVGNLPW+VDN
Sbjct: 179 MSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDN 238
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
RLEQ+FSEHGKVV ARVVYDRETGRSRGFGFVTMS ELN+AI+ALDGQNL+GRAIRV
Sbjct: 239 GRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRV 298
Query: 328 NVAEDRQRRSSF 339
NVAE+R R +
Sbjct: 299 NVAEERPPRRGY 310
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 340 bits (871), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 198/334 (59%), Positives = 232/334 (69%), Gaps = 34/334 (10%)
Query: 10 KPLSSMADSTS--LLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHF 67
KPL+ MADS+S + S PSI + I + + LS S LK TH
Sbjct: 1 KPLA-MADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVSLSLKTKTHL 59
Query: 68 --SSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGE 125
S F +FVAQTSDWA EE GE + +ETE +L
Sbjct: 60 KKSPFVSFVAQTSDWA-----------------EEGGEG-----SVAVEETENSL----- 92
Query: 126 PEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGT 185
E +D V E E + + E V E EF EP E+AKLFVGNL YDV+S+ LAMLFE+AGT
Sbjct: 93 -ESQD-VSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGT 150
Query: 186 VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 245
VEIAEVIYNRETD+SRGFGFVTMS+V+EAE AVE F+RYD++GRLLTVNKAAPRG++PER
Sbjct: 151 VEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPER 210
Query: 246 APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 305
APRV+EP FR+YVGNLPW+VDN RLEQ+FSEHGKVV ARVVYDRETGRSRGFGFVTMS
Sbjct: 211 APRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDV 270
Query: 306 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
ELN+AI+ALDGQNL+GRAIRVNVAE+R R +
Sbjct: 271 DELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 304
>gi|358248672|ref|NP_001239665.1| uncharacterized protein LOC100790280 [Glycine max]
gi|255644452|gb|ACU22730.1| unknown [Glycine max]
Length = 290
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/317 (61%), Positives = 220/317 (69%), Gaps = 55/317 (17%)
Query: 25 PSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSFTTFVAQTSDWADQE 84
PS+F P +P+ L S L+S S L TH S TFVAQTSDWA QE
Sbjct: 27 PSLFT--------PPSKPLTLQFS--CLNSS-VSLSLAAPTHRSPLVTFVAQTSDWAQQE 75
Query: 85 EDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGE 144
E+ Q ETE L W EP GED AG+
Sbjct: 76 EE------------------------QSLAETEAGLESW-EPNGED----AGD------- 99
Query: 145 EGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFG 204
E FVEPPE+AKLFVGNLPYDVDS+KLAMLFE+AGTVEIAEVIYNRETD+SRGFG
Sbjct: 100 ------ESFVEPPEEAKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFG 153
Query: 205 FVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV--FEPGFRIYVGNLP 262
FVTMSTVEEAE AVE F+RYDIDGRLLTVNKA+PRGT+PER P FE IYVGNLP
Sbjct: 154 FVTMSTVEEAESAVEKFNRYDIDGRLLTVNKASPRGTRPERPPPRRSFESSLSIYVGNLP 213
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
W+VDN RL+Q+FS+HG VVNARVVYDRE+GRSRGFGFVTMS ETE+NDA+AALDG++LDG
Sbjct: 214 WDVDNTRLKQIFSKHGNVVNARVVYDRESGRSRGFGFVTMSDETEMNDAVAALDGESLDG 273
Query: 323 RAIRVNVAEDRQRRSSF 339
RAI+V+VAEDR RR SF
Sbjct: 274 RAIKVSVAEDRPRRGSF 290
>gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 158/190 (83%), Positives = 179/190 (94%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
E+ + EPPE+AKLFVGNLPYD+DSEKLA LF++AG VEIAEVIYNRETD+SRGFGF+TMS
Sbjct: 83 EDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMS 142
Query: 210 TVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNAR 269
TVEEAEKAVEMF+RYD++GR LTVNKAAPRG++PER P+ FEP FRIYVGNLPW+VD+AR
Sbjct: 143 TVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDAR 202
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
LEQVFSEHGKVV+ARVVYDR+T RSRGFGFVTMSSETELNDAIAALDGQ+LDGRAIRVNV
Sbjct: 203 LEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNV 262
Query: 330 AEDRQRRSSF 339
AE+R RR S+
Sbjct: 263 AEERPRRGSY 272
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
gi|297311615|gb|EFH42039.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 189/342 (55%), Positives = 228/342 (66%), Gaps = 59/342 (17%)
Query: 1 MSSSTASVLKPLSSMADSTS--LLSPPSIF---ARNPYFS-IHPRPRPIKLHLSDSSLSS 54
M+SS + L ++A+S+S L PSI + P+ S PRPI L LS
Sbjct: 1 MTSSILTSSLKLLAVANSSSSTLFCLPSISTISSSKPHHSNFSLPPRPINLPLS------ 54
Query: 55 KGFSFKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGAD 114
K K + S TFV+QTSDW ++EE +D
Sbjct: 55 ----LKSKTLRNSSPIVTFVSQTSDWPEEEEGED-------------------------- 84
Query: 115 ETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSE 174
G G V+ E+ G+ F EPPE+AKLFVGNLPYDVDS+
Sbjct: 85 ---------GSIGGTSVTVDESFDTEDGGK--------FPEPPEEAKLFVGNLPYDVDSQ 127
Query: 175 KLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 234
LAMLFE+AGTVEI+EVIYNR+TD+SRGFGFVTMSTVEEA+KAVE F+RY+++GRLLTVN
Sbjct: 128 ALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAKKAVEKFNRYEVNGRLLTVN 187
Query: 235 KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 294
AAPRG++PER PR ++ FRIYVGNLPW+VDN RL+QVFSEHGKVV+ARVVYDRETGRS
Sbjct: 188 IAAPRGSRPERQPRQYDAAFRIYVGNLPWDVDNDRLQQVFSEHGKVVDARVVYDRETGRS 247
Query: 295 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
RGFGFVTMS+E E+NDAIAALDGQNL+GRAI+VNVAE+R RR
Sbjct: 248 RGFGFVTMSNENEVNDAIAALDGQNLEGRAIKVNVAEERPRR 289
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
gi|9759027|dbj|BAB09396.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|14532488|gb|AAK63972.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|18655365|gb|AAL76138.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|332008535|gb|AED95918.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
Length = 289
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 184/345 (53%), Positives = 230/345 (66%), Gaps = 70/345 (20%)
Query: 5 TASVLKP---LSSMADSTS--LLSPPSIF----ARNPYFSIHPRPRPIKLHLSDSSLSSK 55
T+SVL P L +M +S+S L PSIF + + F+ RP+ L LS
Sbjct: 2 TSSVLTPSLKLLAMTNSSSSTLFCIPSIFNISSSESHRFNFSLSSRPVNLTLS------- 54
Query: 56 GFSFKLKKTTHFSSFTTFVAQTSDWADQEEDKDN----TTITLEQEQEENGEEEPNWENQ 111
K K + S TFV+QTS+WA++EE +D T++T+++ E
Sbjct: 55 ---LKSKTLRNSSPVVTFVSQTSNWAEEEEGEDGSIGGTSVTVDESFE------------ 99
Query: 112 GADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDV 171
E+GV F EPPE+AKLFVGNLPYDV
Sbjct: 100 -------------------------------SEDGV----GFPEPPEEAKLFVGNLPYDV 124
Query: 172 DSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 231
DS+ LAMLFE+AGTVEI+EVIYNR+TD+SRGFGFVTMSTVEEAEKAVE F+ ++++GR L
Sbjct: 125 DSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRL 184
Query: 232 TVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 291
TVN+AAPRG++PER PRV++ FRIYVGNLPW+VD+ RLE++FSEHGKVV+ARVV DRET
Sbjct: 185 TVNRAAPRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRET 244
Query: 292 GRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
GRSRGFGFV MS+E E+N AIAALDGQNL+GRAI+VNVAE+R RR
Sbjct: 245 GRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289
>gi|356513816|ref|XP_003525605.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 299
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 235/346 (67%), Gaps = 57/346 (16%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIF-ARNPYFSIHPRPRPIKLHL--SDSSLSSKGF 57
MS +T + K L+ MA+S LLS PS+F A+N S+ +P+ LHL S+SSL
Sbjct: 4 MSLTTVAAFKSLT-MAESC-LLSLPSLFYAKNNTLSLSIPTKPLNLHLPCSNSSL----- 56
Query: 58 SFKLK-KTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADET 116
F L KTT SS TFVAQTSDWA +E EEE +WENQG
Sbjct: 57 -FPLTTKTTRHSSLLTFVAQTSDWA-----------------KEEEEEETSWENQGD--- 95
Query: 117 EGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKL 176
+ WG EG E+ EE K+FVGNLP+D+DSE L
Sbjct: 96 ----TAWGTEEGGHEEGGFAEKAEED------------------KIFVGNLPFDIDSENL 133
Query: 177 AMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 236
A LF +AGTVE+AEVIYNR TDRSRGFGFVTMST+EE +KAVEMF Y+++GR+LTVNKA
Sbjct: 134 ASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELKKAVEMFSGYELNGRVLTVNKA 193
Query: 237 APRGTQPERAPRV---FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 293
AP+G QPER PR F G R+YVGNLPWEVD+ARLEQ+FSEHGKV +ARVVYDRETGR
Sbjct: 194 APKGAQPERPPRPPRSFSSGLRVYVGNLPWEVDDARLEQIFSEHGKVEDARVVYDRETGR 253
Query: 294 SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
SRGFGFVTMSSET++NDAIAALDGQ+LDGRAIRVNVA+DR RSSF
Sbjct: 254 SRGFGFVTMSSETDMNDAIAALDGQSLDGRAIRVNVAQDRPSRSSF 299
>gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana]
Length = 315
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 185/331 (55%), Positives = 235/331 (70%), Gaps = 23/331 (6%)
Query: 13 SSMADSTSLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSFTT 72
+S++ ++L P ++ P+ SI + + + L S SS+ S S K K ++ SF
Sbjct: 4 TSISPLSTLFCPKTLI---PFLSIPSKAKLLHLSHSTSSVPS-WVSLKSKLSSSGGSFIA 59
Query: 73 FVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDT- 131
VA+TSDWA Q D DN E GE +WE +G TE +SDW ED
Sbjct: 60 LVARTSDWARQ--DGDN----------EIGEAGFDWEGEG---TEAQVSDWEGEVEEDGE 104
Query: 132 -VVEAG-ERQEESGEEGVFEEEE-FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEI 188
+ E+G E +EESGE G +EE+ + PPE+ K+FVGNLP+D++S LA LF KAG VE
Sbjct: 105 VLGESGAEDEEESGEVGFADEEDSYSAPPEEVKIFVGNLPFDLESADLADLFNKAGVVES 164
Query: 189 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 248
AEVIYNRETD+SRGFGFV+MSTVEE KA+EMF RYDI+GR LTVNKAAPRG++ ER PR
Sbjct: 165 AEVIYNRETDQSRGFGFVSMSTVEEVVKAIEMFDRYDINGRTLTVNKAAPRGSRAERPPR 224
Query: 249 VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
FEP FR+YVGN+PW+VDN RLEQ+FSE+GKV AR+V+DRETGRSRGFGFVTMSS+ E+
Sbjct: 225 DFEPAFRVYVGNIPWQVDNLRLEQLFSEYGKVEEARIVFDRETGRSRGFGFVTMSSQIEM 284
Query: 309 NDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
DAIAALDG +LDGRAI+V++A++R RR F
Sbjct: 285 EDAIAALDGSDLDGRAIKVSMAQERPRRGHF 315
>gi|133246|sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
Flags: Precursor
gi|100388|pir||S12109 ribonucleoprotein, 28K, precursor - common tobacco
gi|19750|emb|CAA37880.1| unnamed protein product [Nicotiana sylvestris]
Length = 276
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/329 (54%), Positives = 224/329 (68%), Gaps = 57/329 (17%)
Query: 15 MADSTSLLSPPSIFARNPYFSIHP----RPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSF 70
MA + L+S P F S +P + +PI L S +L S K+TT F +F
Sbjct: 1 MATNGCLISLPPFFTTTKSISSYPFLSTQLKPISLSSSLPTLLSLN-----KRTTQFPTF 55
Query: 71 TTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGED 130
+ +++ DNT + +QEQ G + P++
Sbjct: 56 VSVLSE----------DDNTLVLDDQEQ---GGDFPSF---------------------- 80
Query: 131 TVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAE 190
V EAGE EE+ EP EDAKLFVGNLPYD+DSE LA LF++AG VEIAE
Sbjct: 81 -VGEAGE------------TEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAE 127
Query: 191 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 250
VIYNRETDRSRGFGFVTMSTVEEA+KAVE++ +YD++GRLLTVNKAAPRG++PERAPR F
Sbjct: 128 VIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTF 187
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
+P +RIYVGN+PW++D+ARLEQVFSEHGKVV+ARVV+DRE+GRSRGFGFVTMSSE E+++
Sbjct: 188 QPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSE 247
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
AIA LDGQ LDGR IRVN AE+R RR+++
Sbjct: 248 AIANLDGQTLDGRTIRVNAAEERPRRNTY 276
>gi|115480705|ref|NP_001063946.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|52076131|dbj|BAD46644.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076138|dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|113632179|dbj|BAF25860.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|215697272|dbj|BAG91266.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737486|dbj|BAG96616.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202645|gb|EEC85072.1| hypothetical protein OsI_32419 [Oryza sativa Indica Group]
gi|222642113|gb|EEE70245.1| hypothetical protein OsJ_30367 [Oryza sativa Japonica Group]
Length = 322
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 173/187 (92%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVE 212
+VEPPE+AK++VGNLPYD+DSE+LA LFE+AG VE++EVIYNRETDRSRGFGFVTMSTVE
Sbjct: 136 YVEPPEEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVE 195
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
EAEKAVEMFHRYD+DGRLLTVNKAAPRG + ER PR F P FRIYVGNLPW+VD++RL Q
Sbjct: 196 EAEKAVEMFHRYDVDGRLLTVNKAAPRGARVERPPRQFGPSFRIYVGNLPWQVDDSRLVQ 255
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
+FSEHGKVV+ARVVYDRETGRSRGFGFVTM+++ EL+DAIAALDGQ+LDGRA+RVNVAE+
Sbjct: 256 LFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRALRVNVAEE 315
Query: 333 RQRRSSF 339
R R F
Sbjct: 316 RPPRRGF 322
>gi|388508864|gb|AFK42498.1| unknown [Medicago truncatula]
Length = 300
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 188/327 (57%), Positives = 221/327 (67%), Gaps = 40/327 (12%)
Query: 14 SMADSTSLLSPPSIF---ARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSF 70
+MA+S LLS PS+F +++P+ S +P ++ +SS S S K+ T SS
Sbjct: 10 TMAESC-LLSQPSLFYTKSKSPFISNSAKPFKVQNPSYNSSKFSSSVSLVSKRRTRHSSL 68
Query: 71 TTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGED 130
TFVAQTSDWA QEE +D T WENQ AD T W
Sbjct: 69 VTFVAQTSDWAQQEEKEDGAT----------------WENQ-ADAT------W------- 98
Query: 131 TVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAE 190
V E + E E FEE P ED K+FVGNLP+DVDSEKLA LFE++GTVEIAE
Sbjct: 99 -VGETESNENEEVEVASFEE-----PSEDLKIFVGNLPFDVDSEKLAQLFEQSGTVEIAE 152
Query: 191 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 250
VIYNR+TDRSRGFGFVTMST EE E+AV F +++DGRLLTVN AAPRGT R PR F
Sbjct: 153 VIYNRDTDRSRGFGFVTMSTSEEVERAVNKFSGFELDGRLLTVNNAAPRGTPRLRQPRTF 212
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
G R YVGNLPW+VDN+ LEQ+FSEHGKV +A+VVYDRETGR RGFGFVTMS+E E+ND
Sbjct: 213 NSGLRAYVGNLPWDVDNSSLEQLFSEHGKVESAQVVYDRETGRLRGFGFVTMSNEAEMND 272
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQRRS 337
AIAALDGQ+ +GRAIRVNVAE+R RRS
Sbjct: 273 AIAALDGQSFNGRAIRVNVAEERPRRS 299
>gi|242048440|ref|XP_002461966.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
gi|241925343|gb|EER98487.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
Length = 294
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 154/210 (73%), Positives = 181/210 (86%), Gaps = 6/210 (2%)
Query: 128 GEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVE 187
ED VEA E+ E E+VEPPE+AK++VGNLPYDVDSE+LA LFE+AG VE
Sbjct: 90 AEDDAVEASAAVEDE------EVGEYVEPPEEAKVYVGNLPYDVDSERLAQLFEQAGVVE 143
Query: 188 IAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 247
+AEVIYNRETDRSRGFGFVTMSTVEEA+KAVEM HRYD++GRLLTVNKAAPRG++ +R P
Sbjct: 144 VAEVIYNRETDRSRGFGFVTMSTVEEADKAVEMLHRYDVNGRLLTVNKAAPRGSRVDRPP 203
Query: 248 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 307
R P RIYVGNLPW+VD+++L Q+FSEHGKVV+ARVVYDRETGRSRGFGFVTM+++ E
Sbjct: 204 RQSGPSLRIYVGNLPWQVDDSKLVQMFSEHGKVVDARVVYDRETGRSRGFGFVTMATQDE 263
Query: 308 LNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
L+DAIAALDGQ+LDGRA+RVNVAE+R RRS
Sbjct: 264 LDDAIAALDGQSLDGRALRVNVAEERPRRS 293
>gi|133247|sp|P28644.1|ROC1_SPIOL RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP
Length = 233
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/231 (72%), Positives = 189/231 (81%), Gaps = 7/231 (3%)
Query: 108 WENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNL 167
WE +G+ T L +PEG V G + S E GV + F EPPE+AKLFVGNL
Sbjct: 8 WEQEGS--TNAVLEGESDPEG---AVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNL 62
Query: 168 PYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDID 227
PYDVDSEKLA +F+ AG VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE+ + YD+D
Sbjct: 63 PYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMD 122
Query: 228 GRLLTVNKAAPRGTQPERAPRV-FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV 286
GR LTVNKAAPRG+ PERAPR FEP R+YVGNLPW+VD +RLEQ+FSEHGKVV+ARVV
Sbjct: 123 GRQLTVNKAAPRGS-PERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVV 181
Query: 287 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
DRETGRSRGFGFVTMSSE+E+NDAIAALDGQ LDGRA+RVNVAE+R RR+
Sbjct: 182 SDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRA 232
>gi|133248|sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|19741|emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris]
gi|19756|emb|CAA37885.1| unnamed protein product [Nicotiana sylvestris]
Length = 315
Score = 317 bits (811), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 198/347 (57%), Positives = 240/347 (69%), Gaps = 40/347 (11%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFARN--------PYFSIHPRPRPIKLHLSDSSL 52
MS +T ++KP SSMA ++ L+S P +FA PY S +P + LHLS
Sbjct: 1 MSCATKPIIKP-SSMATNSCLISLPPLFATTTKSKSFAYPYLSNTLKPIKL-LHLS---- 54
Query: 53 SSKGFSFKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQG 112
T+ + +TS A QEE+ T+ L+ + +E+G+ N+E G
Sbjct: 55 -----------CTYSPCILSPKKKTSVSALQEEEN---TLILDGQGQESGDLF-NFEPSG 99
Query: 113 ADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVD 172
+ E E V G+ E E EEEEF EPPEDAKLFVGNLPYDVD
Sbjct: 100 EETEE-----------EGFVEAVGDAGESDEVEADEEEEEFQEPPEDAKLFVGNLPYDVD 148
Query: 173 SEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 232
SE LA LFE+AG VEIAEVIYNR+TD+SRGFGFVTMSTVEEAEKAVEM++RYD++GRLLT
Sbjct: 149 SEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLT 208
Query: 233 VNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
VNKAA RG +PER PR FE +RIYVGN+PW +D+ARLEQ+FSEHGKVV+ARVVYDRETG
Sbjct: 209 VNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETG 268
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
RSRGFGFVTM+SE E++DAIA LDGQ+LDGR IRVNVAEDR RR++F
Sbjct: 269 RSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDRSRRNTF 315
>gi|388512737|gb|AFK44430.1| unknown [Medicago truncatula]
Length = 291
Score = 317 bits (811), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 208/325 (64%), Gaps = 41/325 (12%)
Query: 18 STSLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSFTTFVAQT 77
ST+ L A + S + +P L SL+ S K ++ S FVAQ
Sbjct: 5 STTPLFKSLTMAESCLLSSQSKSKPTFFSLPSKSLNLH-LSLKTNRSISISPSPLFVAQ- 62
Query: 78 SDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTVVEAGE 137
+ D T +L DE G DW EP + E G
Sbjct: 63 --------EGDTLTTSL-------------------DEEAGLSLDW-EPTADAAETETGA 94
Query: 138 RQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRET 197
G FVEPPEDAKLFVGN P+DVDSEKLAMLF +AGTVEIAEVIYNR+T
Sbjct: 95 DDSAEGY--------FVEPPEDAKLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQT 146
Query: 198 DRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER---APRVFEPGF 254
D SRGFGFVTM+TVEEAE AVE F+ YD +GR L VNKA+P+G++PER APR FEP
Sbjct: 147 DLSRGFGFVTMNTVEEAESAVEKFNGYDYNGRSLVVNKASPKGSRPERTERAPRTFEPVL 206
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
RIYV NL WEVDN+RLEQVFSEHGK+V+ARVVYDRETGRSRGFGFVTMS ETE+NDAIAA
Sbjct: 207 RIYVANLAWEVDNSRLEQVFSEHGKIVSARVVYDRETGRSRGFGFVTMSDETEMNDAIAA 266
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSSF 339
LDGQ+L+GR IRV+VAEDR RR SF
Sbjct: 267 LDGQSLEGRTIRVSVAEDRPRRGSF 291
>gi|149391365|gb|ABR25700.1| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 186
Score = 317 bits (811), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 150/186 (80%), Positives = 172/186 (92%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
VEPPE+AK++VGNLPYD+DSE+LA LFE+AG VE++EVIYNRETDRSRGFGFVTMSTVEE
Sbjct: 1 VEPPEEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEE 60
Query: 214 AEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
AEKAVEMFHRYD+DGRLLTVNKAAPRG + ER PR F P FRIYVGNLPW+VD++RL Q+
Sbjct: 61 AEKAVEMFHRYDVDGRLLTVNKAAPRGARVERPPRQFGPSFRIYVGNLPWQVDDSRLVQL 120
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FSEHGKVV+ARVVYDRETGRSRGFGFVTM+++ EL+DAIAALDGQ+LDGRA+RVNVAE+R
Sbjct: 121 FSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRALRVNVAEER 180
Query: 334 QRRSSF 339
R F
Sbjct: 181 PPRRGF 186
>gi|21309|emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea]
Length = 226
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 167/231 (72%), Positives = 189/231 (81%), Gaps = 7/231 (3%)
Query: 108 WENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNL 167
WE +G+ T L +PEG V G + S E GV + F EPPE+AKLFVGNL
Sbjct: 1 WEQEGS--TNAVLEGESDPEG---AVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNL 55
Query: 168 PYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDID 227
PYDVDSEKLA +F+ AG VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE+ + YD+D
Sbjct: 56 PYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMD 115
Query: 228 GRLLTVNKAAPRGTQPERAPRV-FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV 286
GR LTVNKAAPRG+ PERAPR FEP R+YVGNLPW+VD +RLEQ+FSEHGKVV+ARVV
Sbjct: 116 GRQLTVNKAAPRGS-PERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVV 174
Query: 287 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
DRETGRSRGFGFVTMSSE+E+NDAIAALDGQ LDGRA+RVNVAE+R RR+
Sbjct: 175 SDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRA 225
>gi|224055617|ref|XP_002298568.1| predicted protein [Populus trichocarpa]
gi|118486956|gb|ABK95311.1| unknown [Populus trichocarpa]
gi|222845826|gb|EEE83373.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/219 (74%), Positives = 190/219 (86%), Gaps = 7/219 (3%)
Query: 121 SDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLF 180
SDW + + EDTV EES +G EE F EPPE+AKL+VGNLPYDV+SE LA LF
Sbjct: 65 SDWAQQDEEDTVTLG----EESFGDG--SEETFPEPPEEAKLYVGNLPYDVNSENLAQLF 118
Query: 181 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG 240
++AGTVE+AE+IYNRETD+SRGFGFVTMSTV+EAEKA+E FHRYD++GR LTVNKAAPRG
Sbjct: 119 DQAGTVEVAEIIYNRETDQSRGFGFVTMSTVDEAEKAIEKFHRYDLNGRFLTVNKAAPRG 178
Query: 241 TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 300
++PER P VF+ +RIYVGNLPW+VD+ARLEQVFSEHG+VVNARVV DRETGRSRGFGFV
Sbjct: 179 SRPER-PSVFKIAYRIYVGNLPWQVDDARLEQVFSEHGQVVNARVVCDRETGRSRGFGFV 237
Query: 301 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
TMSSETELNDAIAALDGQ+LDGRAI VN+A++R RR SF
Sbjct: 238 TMSSETELNDAIAALDGQSLDGRAITVNIAQERPRRGSF 276
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 125/277 (45%), Gaps = 61/277 (22%)
Query: 12 LSSMADSTSLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSFT 71
L S+ +T+ + SI ++P+ SI +P IK+ S S S KT++FS+F
Sbjct: 6 LMSVYRTTNTVFDTSI--KSPFISITSKP--IKVVFSTSFPSWVSL-----KTSNFSTFN 56
Query: 72 T--FVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWE----------NQGADETEGN 119
T VAQTSDWA Q+E+ T+TL +E +G EE E N D N
Sbjct: 57 TIPLVAQTSDWAQQDEED---TVTLGEESFGDGSEETFPEPPEEAKLYVGNLPYDVNSEN 113
Query: 120 LSDWGEPEGEDTVVEAGERQEESGEEG--------VFEEEEFVEP--------------- 156
L+ + G V E +E G V E E+ +E
Sbjct: 114 LAQLFDQAGTVEVAEIIYNRETDQSRGFGFVTMSTVDEAEKAIEKFHRYDLNGRFLTVNK 173
Query: 157 -------PE-------DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRG 202
PE +++VGNLP+ VD +L +F + G V A V+ +RET RSRG
Sbjct: 174 AAPRGSRPERPSVFKIAYRIYVGNLPWQVDDARLEQVFSEHGQVVNARVVCDRETGRSRG 233
Query: 203 FGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 239
FGFVTMS+ E A+ +DGR +TVN A R
Sbjct: 234 FGFVTMSSETELNDAIAALDGQSLDGRAITVNIAQER 270
>gi|162463757|ref|NP_001105347.1| nucleic acid binding protein1 [Zea mays]
gi|168526|gb|AAA33486.1| nucleic acid-binding protein [Zea mays]
gi|195637380|gb|ACG38158.1| ribonucleoprotein [Zea mays]
gi|219884029|gb|ACL52389.1| unknown [Zea mays]
gi|414884557|tpg|DAA60571.1| TPA: nucleic acid binding protein1 [Zea mays]
Length = 303
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/181 (79%), Positives = 169/181 (93%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
PPE+AK++VGNLPYDVDSE+LA LF++AG VE+AEVIYNRETD+SRGFGFVTMSTVEEAE
Sbjct: 121 PPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAE 180
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KAVEMFHRYD++GRLLTVNKAAPRG++ +R PR P RIYVGNLPW+VD++RL ++FS
Sbjct: 181 KAVEMFHRYDVNGRLLTVNKAAPRGSRVDRPPRQSGPSLRIYVGNLPWQVDDSRLVELFS 240
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
EHGKVV+ARVVYDRETGRSRGFGFVTM+S+ EL+DAIAALDGQ+LDGRA+RVNVAE+R R
Sbjct: 241 EHGKVVDARVVYDRETGRSRGFGFVTMASQDELDDAIAALDGQSLDGRALRVNVAEERPR 300
Query: 336 R 336
R
Sbjct: 301 R 301
>gi|326493824|dbj|BAJ85374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 144/185 (77%), Positives = 171/185 (92%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTV 211
E+VEPPE+AK++VGNLPYDVDSE+LA LFE+AG VE++EVIYNRETD+SRGFGFVTMST+
Sbjct: 108 EYVEPPEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTI 167
Query: 212 EEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLE 271
EEAEKAVEMFHRYD++GRLLTVNKAAPRG + ER PR FRIYVGNLPW+VD++RL
Sbjct: 168 EEAEKAVEMFHRYDVNGRLLTVNKAAPRGARVERPPRDSGSSFRIYVGNLPWQVDDSRLV 227
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
++FSEHGKVV+ARVVYDR+TGRSRGFGFVTM+S+ EL+DAIAALDGQ+L+GRA+RVNVAE
Sbjct: 228 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 287
Query: 332 DRQRR 336
+R R
Sbjct: 288 ERPPR 292
>gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/185 (77%), Positives = 171/185 (92%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTV 211
E+VEPPE+AK++VGNLPYDVDSE+LA LFE+AG VE++EVIYNRETD+SRGFGFVTMST+
Sbjct: 108 EYVEPPEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTI 167
Query: 212 EEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLE 271
EEAEKAVEMFHRYD++GRLLTVNKAAPRG + ER PR FRIYVGNLPW+VD++RL
Sbjct: 168 EEAEKAVEMFHRYDVNGRLLTVNKAAPRGARVERPPRDSGSSFRIYVGNLPWQVDDSRLV 227
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
++FSEHGKVV+A+VVYDR+TGRSRGFGFVTM+S+ EL+DAIAALDGQ+L+GRA+RVNVAE
Sbjct: 228 ELFSEHGKVVDAKVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 287
Query: 332 DRQRR 336
+R R
Sbjct: 288 ERPPR 292
>gi|2330647|emb|CAA74889.1| ribonucleoprotein [Pisum sativum]
gi|10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum]
Length = 291
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 180/302 (59%), Positives = 205/302 (67%), Gaps = 46/302 (15%)
Query: 41 RPIKLHLSDSSLSSKGFSFKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEE 100
+P K H+S +S S S K + T F AQ + T+T E+
Sbjct: 33 KPFKFHISLNSSPSLTLSLKTNRATPL-----FAAQ-----------EGETLTTEE---- 72
Query: 101 NGEEEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDA 160
G ETEG L DW EPE + E GE+ + +F EP EDA
Sbjct: 73 -----------GVVETEG-LIDW-EPEAAE--------NETGGED--YAGGDFAEPSEDA 109
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLFVGNLPYDVDSEKLAMLFE AGTVEIAEVIYNRETD+SRGFGFVTMSTVEEAE
Sbjct: 110 KLFVGNLPYDVDSEKLAMLFEPAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEAGAAK 169
Query: 221 FHRYDIDGRLLTVNKAAPRGT---QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
F+RYD +GR LTVNKAAPRG+ + ER PR FEP R+YVGNL WE+D++RLEQVFSEH
Sbjct: 170 FNRYDYNGRPLTVNKAAPRGSRPEREERPPRTFEPVLRVYVGNLSWELDDSRLEQVFSEH 229
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
GKVV+ARVVYDRETGRSRGFGFVTMS E E+NDAIAALDGQ L+GR I+V+VAEDR RR
Sbjct: 230 GKVVSARVVYDRETGRSRGFGFVTMSDEKEMNDAIAALDGQILEGRTIKVSVAEDRPRRG 289
Query: 338 SF 339
SF
Sbjct: 290 SF 291
>gi|1054915|gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus]
Length = 292
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 179/339 (52%), Positives = 218/339 (64%), Gaps = 50/339 (14%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFK 60
M++STA+ L ++A S + P SIF P L L + ++ F +K
Sbjct: 1 MATSTATN-HFLKTLAISITTQKPTSIFP------------PKSLVLEKPTTNNSQFHYK 47
Query: 61 LKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNL 120
T H QTSD+ ++E N I E+E E E NWE
Sbjct: 48 ---THHLCCMCCL--QTSDF--EQESSPNAVID-EEENVEKTEAAVNWE----------- 88
Query: 121 SDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLF 180
D EP+ G E+ F EP ED KL+VGNLP+DVDSEKLA +F
Sbjct: 89 -DASEPQPSS---------------GFGSEDGFSEPSEDVKLYVGNLPFDVDSEKLANMF 132
Query: 181 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG 240
+ AG VEIAEVIYNRETDRSRGFGFVTMSTVEEA+KAVEMFH Y+++GRLLTVNKAAPRG
Sbjct: 133 DAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEMFHSYELNGRLLTVNKAAPRG 192
Query: 241 TQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 299
++PE+APR F P YVGNLPW+VDN RLEQ+ SEHGKV++ARVV DRET RSRGFGF
Sbjct: 193 SRPEKAPREFCPLLSESYVGNLPWDVDNDRLEQLSSEHGKVLSARVVSDRETERSRGFGF 252
Query: 300 VTMSSETELNDA-IAALDGQNLDGRAIRVNVAEDRQRRS 337
VTM+SETE+NDA + ALDG++L+GR IRVNVAE+R RR+
Sbjct: 253 VTMASETEMNDATLGALDGESLEGRPIRVNVAEERPRRT 291
>gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum]
Length = 293
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 141/181 (77%), Positives = 167/181 (92%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
PPE+AK++VGNLPYDVDSE+LA LFE+AG VE++EVIYNRETD+SRGFGFVTMST+EEAE
Sbjct: 111 PPEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAE 170
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KAVEMFHRYD++GRLLTVNKAAPRG + ER PR FRIYVGNLPW+VD++RL ++FS
Sbjct: 171 KAVEMFHRYDVNGRLLTVNKAAPRGARVERPPRDSGSSFRIYVGNLPWQVDDSRLVELFS 230
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
EHGKVV+ARVVYDR+TGRSRGFGFVTM+S+ EL+DAIAALDGQ+L+GRA+RVNVAE+R
Sbjct: 231 EHGKVVDARVVYDRDTGRSRGFGFVTMASQPELDDAIAALDGQSLEGRALRVNVAEERPP 290
Query: 336 R 336
R
Sbjct: 291 R 291
>gi|388518645|gb|AFK47384.1| unknown [Lotus japonicus]
Length = 307
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 183/348 (52%), Positives = 221/348 (63%), Gaps = 50/348 (14%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFARNPYFSIHPRP-RPIKLHLSDSSLSSKGFSF 59
MS +T K L+ +A+S LLS PS+F+ + I + +KL L S+ S S
Sbjct: 1 MSITTMPAFKFLT-VAESC-LLSQPSLFSSKTRYPILSNSLKTLKLQLPCSNSSPF--SP 56
Query: 60 KLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGN 119
L TTH S TFVAQTSDWA QEE+ EN E EP W N+ +DETEG
Sbjct: 57 SLLSTTHRSPLLTFVAQTSDWAQQEEEGGAAW--------EN-EGEPTWANEDSDETEG- 106
Query: 120 LSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAML 179
GE+ V A EP ED K+FVGNLP+DV+SE LAML
Sbjct: 107 --------GEEVVASA-------------------EPSEDLKIFVGNLPWDVESENLAML 139
Query: 180 FEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 239
FE+AG+VE AEVIYN+ T++SRGFGFV MST E+ EKA+ F Y++DGR+LTVNKA P+
Sbjct: 140 FEEAGSVEFAEVIYNKATNQSRGFGFVIMSTAEDLEKALNKFSGYELDGRVLTVNKATPK 199
Query: 240 GTQPERAPRVF-------EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
+PER PR F + G +YVGNLPW VD ARLE++F EHG V NAR+V DRETG
Sbjct: 200 EARPERPPRTFGSGSGSRDSGLSVYVGNLPWSVDAARLEEIFREHGNVENARIVMDRETG 259
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ-RRSSF 339
RSRGFGFVTMSSE ++N AIAALDGQ+LDGR IRV+VAE R RSSF
Sbjct: 260 RSRGFGFVTMSSEADINGAIAALDGQSLDGRTIRVSVAEGRSGGRSSF 307
>gi|357160118|ref|XP_003578663.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 296
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 142/182 (78%), Positives = 166/182 (91%), Gaps = 1/182 (0%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
PPE+AK++VGNLPYD+DSE+LA LFE+AG VE++EVIYNRETD+SRGFGFVTMST+EEAE
Sbjct: 113 PPEEAKVYVGNLPYDIDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAE 172
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF-EPGFRIYVGNLPWEVDNARLEQVF 274
KAVEMFHRYD+ GRLLTVNKAAPRG + ER R F FRIYVGNLPW+VD++RL Q+F
Sbjct: 173 KAVEMFHRYDVGGRLLTVNKAAPRGARVERPARDFGGSSFRIYVGNLPWQVDDSRLVQLF 232
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
SEHGKVV+ARVVYDRETGRSRGFGFVTM+S+ EL+DAIAALDGQ+L+GRA+RVNVAE+R
Sbjct: 233 SEHGKVVDARVVYDRETGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAEERP 292
Query: 335 RR 336
R
Sbjct: 293 PR 294
>gi|363807234|ref|NP_001242356.1| 31 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
gi|255645622|gb|ACU23305.1| unknown [Glycine max]
Length = 300
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 193/343 (56%), Positives = 229/343 (66%), Gaps = 49/343 (14%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIF-ARNPYFSIHPRPRPIKLHL--SDSSLSSKGF 57
+S ST L+ MA+S LLS PS+F A+N S+ P+ L S+SSL
Sbjct: 3 LSLSTVPAFNSLT-MAESC-LLSLPSLFYAKNKTLSLSIPTNPLNLQFPCSNSSL----- 55
Query: 58 SFKLK-KTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADET 116
F L KTT SS TFVAQTS WA + E+++ ENQG
Sbjct: 56 -FPLTTKTTRHSSLLTFVAQTSGWAKEGEEEEAAW-----------------ENQGD--- 94
Query: 117 EGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKL 176
+ WG EG D + + GE E E+ K+FVGNLP+D DSEKL
Sbjct: 95 ----TAWGTEEGGDDIEDGGEGGFAEEEA------------EEVKIFVGNLPFDFDSEKL 138
Query: 177 AMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 236
A LFE+AGTVE+AEVIYNR TDRSRGFGFVTMST+EE EKAV+MF Y+++GR+LTVNKA
Sbjct: 139 ASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKMFSGYELNGRVLTVNKA 198
Query: 237 APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 296
AP+G QPER PR FR+YVGNLPW+VDN+RLEQ+FSEHGKV +ARVVYDRETGRSRG
Sbjct: 199 APKGAQPERPPRP-PQSFRVYVGNLPWDVDNSRLEQIFSEHGKVEDARVVYDRETGRSRG 257
Query: 297 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
FGFVTMSSET++NDAIAALDGQ+LDGRAIRVNVA R + SSF
Sbjct: 258 FGFVTMSSETDMNDAIAALDGQSLDGRAIRVNVAAQRPKPSSF 300
>gi|193850551|gb|ACF22879.1| RNA-binding protein [Glycine max]
Length = 302
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 193/343 (56%), Positives = 229/343 (66%), Gaps = 49/343 (14%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIF-ARNPYFSIHPRPRPIKLHL--SDSSLSSKGF 57
+S ST L+ MA+S LLS PS+F A+N S+ P+ L S+SSL
Sbjct: 5 LSLSTVPAFNSLT-MAESC-LLSLPSLFYAKNKTLSLSIPTNPLNLQFPCSNSSL----- 57
Query: 58 SFKLK-KTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADET 116
F L KTT SS TFVAQTS WA + E+++ ENQG
Sbjct: 58 -FPLTTKTTRHSSLLTFVAQTSGWAKEGEEEEAAW-----------------ENQGD--- 96
Query: 117 EGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKL 176
+ WG EG D + + GE E E+ K+FVGNLP+D DSEKL
Sbjct: 97 ----TAWGTEEGGDDIEDGGEGGFAEEEA------------EEVKIFVGNLPFDFDSEKL 140
Query: 177 AMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 236
A LFE+AGTVE+AEVIYNR TDRSRGFGFVTMST+EE EKAV+MF Y+++GR+LTVNKA
Sbjct: 141 ASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKMFSGYELNGRVLTVNKA 200
Query: 237 APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 296
AP+G QPER PR FR+YVGNLPW+VDN+RLEQ+FSEHGKV +ARVVYDRETGRSRG
Sbjct: 201 APKGAQPERPPRP-PQSFRVYVGNLPWDVDNSRLEQIFSEHGKVEDARVVYDRETGRSRG 259
Query: 297 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
FGFVTMSSET++NDAIAALDGQ+LDGRAIRVNVA R + SSF
Sbjct: 260 FGFVTMSSETDMNDAIAALDGQSLDGRAIRVNVAAQRPKPSSF 302
>gi|242079661|ref|XP_002444599.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
gi|241940949|gb|EES14094.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
Length = 292
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/197 (72%), Positives = 171/197 (86%), Gaps = 5/197 (2%)
Query: 142 SGEEGVFEEEEF--VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDR 199
SG+EG E E+ VEPPE+AK++VGNLPYD+DSE LA LF++AG VE+AEVIYNRET +
Sbjct: 97 SGDEG---EGEYAAVEPPEEAKVYVGNLPYDIDSEGLAQLFDQAGVVEVAEVIYNRETGQ 153
Query: 200 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVG 259
SRGFGFVTMST+EEA+KA+EMF+RYDI GRLL VN+A+PRGT+ ER PR F P FR YVG
Sbjct: 154 SRGFGFVTMSTIEEADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPRQFAPAFRAYVG 213
Query: 260 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 319
NLPW+VD++RL Q+FSEHG+VVNA VVYDRE+GRSRGFGFVTM S+ EL+DAI+ALDGQ
Sbjct: 214 NLPWQVDDSRLVQLFSEHGEVVNATVVYDRESGRSRGFGFVTMVSKEELDDAISALDGQE 273
Query: 320 LDGRAIRVNVAEDRQRR 336
LDGR +RVNVA +R +R
Sbjct: 274 LDGRPLRVNVAAERPQR 290
>gi|226509575|ref|NP_001149184.1| LOC100282806 [Zea mays]
gi|195625314|gb|ACG34487.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/232 (65%), Positives = 185/232 (79%), Gaps = 14/232 (6%)
Query: 109 ENQGADETEGNLSDWGEPEGEDTVVEAGERQE--ESGEEGVFEEEEF--VEPPEDAKLFV 164
E + ADE E E GE +EAGE +E SG EG E ++ VEPPE+AK++V
Sbjct: 63 EAKSADEEE-------EKAGEPVDMEAGEFEEVLASGGEG---EGQYAAVEPPEEAKVYV 112
Query: 165 GNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRY 224
GNLPYDVDSE LA +F++AG VE+AEVIYNRET +SRGFGFVTMSTVEEA+KA+EMF+RY
Sbjct: 113 GNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEMFNRY 172
Query: 225 DIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 284
DI GRLL VN+A+ RGT+ ER R F P FR YVGNLPW+VD++RL Q+FSEHG+VV+A+
Sbjct: 173 DISGRLLNVNRASSRGTRMERPQRQFAPAFRAYVGNLPWQVDDSRLVQLFSEHGEVVDAK 232
Query: 285 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
VVYDRETGRSRGFGFV+M S+ ELNDAI+ALDGQ LDGR +RVNVA +R +R
Sbjct: 233 VVYDRETGRSRGFGFVSMVSKEELNDAISALDGQELDGRPLRVNVAAERPQR 284
>gi|413921823|gb|AFW61755.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/232 (65%), Positives = 184/232 (79%), Gaps = 14/232 (6%)
Query: 109 ENQGADETEGNLSDWGEPEGEDTVVEAGERQE--ESGEEGVFEEEEF--VEPPEDAKLFV 164
E + ADE E E GE +EAGE +E SG EG E ++ VEPPE+AK++V
Sbjct: 63 EAKSADEEE-------EKAGEPVEMEAGEFEEVLASGGEG---EGQYAAVEPPEEAKVYV 112
Query: 165 GNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRY 224
GNLPYDVDSE LA +F++AG VE+AEVIYNRET +SRGFGFVTMSTVEEA+KA+EMF RY
Sbjct: 113 GNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEMFSRY 172
Query: 225 DIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 284
DI GRLL VN+A+ RGT+ ER R F P FR YVGNLPW+VD++RL Q+FSEHG+VV+A+
Sbjct: 173 DISGRLLNVNRASSRGTRMERPQRQFAPAFRAYVGNLPWQVDDSRLVQLFSEHGEVVDAK 232
Query: 285 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
VVYDRETGRSRGFGFV+M S+ ELNDAI+ALDGQ LDGR +RVNVA +R +R
Sbjct: 233 VVYDRETGRSRGFGFVSMVSKEELNDAISALDGQELDGRPLRVNVAAERPQR 284
>gi|99029149|gb|ABF60862.1| GRSF [Lilium longiflorum]
Length = 207
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/180 (77%), Positives = 167/180 (92%), Gaps = 2/180 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
AKLFVGN+PYD DSEKLA LF+KAG VE+AEVIYNRETD+SRGFGFVTMSTVEEAE+AVE
Sbjct: 30 AKLFVGNIPYD-DSEKLANLFDKAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAERAVE 88
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
M HRYDI+GR LTVNKAAPRG++PER PR +P R+YVGNLPW+VD++RLEQ+FSEHGK
Sbjct: 89 MLHRYDINGRNLTVNKAAPRGSRPER-PRESDPSLRVYVGNLPWQVDDSRLEQLFSEHGK 147
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
V++ARVVYDR++GRSRGFGFVT+++ E++DAIAALDGQ+L+GRA+RVNVAE+R RRSSF
Sbjct: 148 VIDARVVYDRQSGRSRGFGFVTLATREEVDDAIAALDGQSLEGRALRVNVAEERPRRSSF 207
>gi|212274649|ref|NP_001130287.1| uncharacterized protein LOC100191381 [Zea mays]
gi|194688754|gb|ACF78461.1| unknown [Zea mays]
gi|414870130|tpg|DAA48687.1| TPA: ribonucleoprotein [Zea mays]
Length = 289
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/197 (70%), Positives = 170/197 (86%), Gaps = 5/197 (2%)
Query: 142 SGEEGVFEEEEF--VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDR 199
SG+EG E E+ VEPPE+AK++VGNLPYD++SE LA LF++AG VE+AEVIYN+ET +
Sbjct: 94 SGDEG---EGEYAAVEPPEEAKVYVGNLPYDIESEGLAQLFDQAGVVEVAEVIYNKETGQ 150
Query: 200 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVG 259
SRGFGFVTMST+EEA+KA+EMF+RYDI GRLL VN+A+PRGT+ ER PR F P FR YVG
Sbjct: 151 SRGFGFVTMSTIEEADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPRQFAPAFRAYVG 210
Query: 260 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 319
NLPW+ D++RL Q+FSE+G+VVNA VVYDRETGRSRGFGFVTM S+ EL+DAI+ALDGQ
Sbjct: 211 NLPWQADDSRLVQLFSEYGEVVNAAVVYDRETGRSRGFGFVTMVSKEELDDAISALDGQE 270
Query: 320 LDGRAIRVNVAEDRQRR 336
LDGR +RVNVA +R +R
Sbjct: 271 LDGRPLRVNVAAERPQR 287
>gi|195624584|gb|ACG34122.1| ribonucleoprotein [Zea mays]
Length = 289
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 139/197 (70%), Positives = 170/197 (86%), Gaps = 5/197 (2%)
Query: 142 SGEEGVFEEEEF--VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDR 199
SG+EG E E+ VEPPE+AK++VGNLPYD++SE LA LF++AG VE+AEVIYN+ET +
Sbjct: 94 SGDEG---EGEYAAVEPPEEAKVYVGNLPYDIESEGLAQLFDQAGVVEVAEVIYNKETGQ 150
Query: 200 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVG 259
SRGFGFVTMST+EEA+KA+EMF+RYDI GRLL VN+A+PRGT+ ER PR F P FR YVG
Sbjct: 151 SRGFGFVTMSTIEEADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPRQFAPAFRAYVG 210
Query: 260 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 319
NLPW+ D++RL Q+FSE+G+VVNA VVYDRETGRSRGFGFVTM S+ EL+DAI+ALDGQ
Sbjct: 211 NLPWQADDSRLVQLFSEYGEVVNAAVVYDRETGRSRGFGFVTMVSKEELDDAISALDGQE 270
Query: 320 LDGRAIRVNVAEDRQRR 336
LDGR +RVNVA +R +R
Sbjct: 271 LDGRPLRVNVAAERPQR 287
>gi|255636284|gb|ACU18482.1| unknown [Glycine max]
Length = 280
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 182/323 (56%), Positives = 214/323 (66%), Gaps = 57/323 (17%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIF-ARNPYFSIHPRPRPIKLHL--SDSSLSSKGF 57
MS +T + K L+ MA+S LLS PS+F A+N S+ +P+ LHL S+SSL
Sbjct: 4 MSLTTVAAFKSLT-MAES-CLLSLPSLFYAKNNTLSLSIPTKPLNLHLPCSNSSL----- 56
Query: 58 SFKLK-KTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADET 116
F L KTT SS TFVAQTSDWA +E EEE +WENQG
Sbjct: 57 -FPLTTKTTRHSSLLTFVAQTSDWA-----------------KEEEEEETSWENQGD--- 95
Query: 117 EGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKL 176
+ WG EG E+ EE K+FVGNLP+D+DSE L
Sbjct: 96 ----TAWGTEEGGHEEGGFAEKAEED------------------KIFVGNLPFDIDSENL 133
Query: 177 AMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 236
A LF +AGTVE+AEVIYNR TDRSRGFGFVTMST+EE +KAVEMF Y+++GR+LTVNKA
Sbjct: 134 ASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELKKAVEMFSGYELNGRVLTVNKA 193
Query: 237 APRGTQPERAPRV---FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 293
AP+G QPER PR F G R+YVGNLPWEVD+ARLEQ+FSEHGKV +ARVVYDRETGR
Sbjct: 194 APKGAQPERPPRPPRSFSSGLRVYVGNLPWEVDDARLEQIFSEHGKVEDARVVYDRETGR 253
Query: 294 SRGFGFVTMSSETELNDAIAALD 316
SRGFGFVTMSSET++NDAIAALD
Sbjct: 254 SRGFGFVTMSSETDMNDAIAALD 276
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+I+VGNLP+++D+ L +F + G V A V+Y+R T RSRGFGFVTMS+ EL A+
Sbjct: 118 KIFVGNLPFDIDSENLASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELKKAVEM 177
Query: 315 LDGQNLDGRAIRVNVA 330
G L+GR + VN A
Sbjct: 178 FSGYELNGRVLTVNKA 193
>gi|357148860|ref|XP_003574918.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 286
Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 130/181 (71%), Positives = 160/181 (88%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
PPE+AK++VGNLPYDVDSE+LA LF++AG VE+AEVIYNRE+ +SRGFGFVTMST+EEA+
Sbjct: 104 PPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEAD 163
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+EMF+RYDI GRLL VN+AA RG++ ER PR F FR YVGNLPW+ +++RL Q+FS
Sbjct: 164 KAIEMFNRYDISGRLLNVNRAAQRGSRVERPPRQFASAFRAYVGNLPWQAEDSRLVQLFS 223
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
EHG+V+NA VVYDRETGRSRGFGFVTM+S+ EL+DAI+ALDGQ LDGR +RVNVA +R +
Sbjct: 224 EHGEVLNATVVYDRETGRSRGFGFVTMASKEELDDAISALDGQELDGRPLRVNVAAERPQ 283
Query: 336 R 336
R
Sbjct: 284 R 284
>gi|297608990|ref|NP_001062481.2| Os08g0557100 [Oryza sativa Japonica Group]
gi|255678651|dbj|BAF24395.2| Os08g0557100, partial [Oryza sativa Japonica Group]
Length = 194
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/177 (74%), Positives = 158/177 (89%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
AK++VGNLPYDVDSE LA LFE+AG VE+AEVIYNRET +SRGFGFVTMST+EEA+KA+E
Sbjct: 16 AKVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIE 75
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
M +RYDI+GRLL VN+AAPRG++ ER PR F P FR YVGNLPW+VD++RL Q+FSEHG+
Sbjct: 76 MLNRYDINGRLLNVNRAAPRGSRVERPPRQFAPAFRAYVGNLPWQVDDSRLLQLFSEHGE 135
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
VVNA VVYDRE+GRSRGFGFV+M+S+ EL+DAI+ALDGQ LDGR +RVNVA +R +R
Sbjct: 136 VVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNVAAERPQR 192
>gi|42407939|dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|125604308|gb|EAZ43633.1| hypothetical protein OsJ_28256 [Oryza sativa Japonica Group]
gi|215697914|dbj|BAG92121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 305
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 157/176 (89%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K++VGNLPYDVDSE LA LFE+AG VE+AEVIYNRET +SRGFGFVTMST+EEA+KA+EM
Sbjct: 128 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 187
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+RYDI+GRLL VN+AAPRG++ ER PR F P FR YVGNLPW+VD++RL Q+FSEHG+V
Sbjct: 188 LNRYDINGRLLNVNRAAPRGSRVERPPRQFAPAFRAYVGNLPWQVDDSRLLQLFSEHGEV 247
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
VNA VVYDRE+GRSRGFGFV+M+S+ EL+DAI+ALDGQ LDGR +RVNVA +R +R
Sbjct: 248 VNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNVAAERPQR 303
>gi|125562527|gb|EAZ07975.1| hypothetical protein OsI_30233 [Oryza sativa Indica Group]
Length = 306
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 157/176 (89%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K++VGNLPYDVDSE LA LFE+AG VE+AEVIYNRET +SRGFGFVTMST+EEA+KA+EM
Sbjct: 129 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 188
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+RYDI+GRLL VN+AAPRG++ ER PR F P FR YVGNLPW+VD++RL Q+FSEHG+V
Sbjct: 189 LNRYDINGRLLNVNRAAPRGSRVERPPRQFAPAFRAYVGNLPWQVDDSRLLQLFSEHGEV 248
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
VNA VVYDRE+GRSRGFGFV+M+S+ EL+DAI+ALDGQ LDGR +RVNVA +R +R
Sbjct: 249 VNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNVAAERPQR 304
>gi|326527719|dbj|BAK08134.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 127/182 (69%), Positives = 159/182 (87%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EPPE+AK++VGNLPYDVDSE+LA LF++AG VE+AEVIYNRE+ +SRGFGFVTMST+EEA
Sbjct: 100 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 159
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
+KA+E F+RYDI GRLL VN+AA RG++ ER PR F FR YVGNLPW+ +++RL Q+F
Sbjct: 160 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 219
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
SEHG+VVNA +VYDRETGRSRGFGFVTM+S+ +L+ AI+ALDGQ +DGR +RVNVA +R
Sbjct: 220 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERP 279
Query: 335 RR 336
+R
Sbjct: 280 QR 281
>gi|475720|gb|AAA18380.1| RNA-binding protein 3 [Arabidopsis thaliana]
Length = 162
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/162 (81%), Positives = 150/162 (92%)
Query: 178 MLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA 237
MLFE+AGTVEIAEVIYNRETD+SRGFGFVTMS+V+EAE AVE F+RYD++GRLLTVNKAA
Sbjct: 1 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAA 60
Query: 238 PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 297
PRG++PERAPRV+EP FR+YVGNLPW+VDN RLEQ+FSEHGKVV ARVVYDRETGRSRGF
Sbjct: 61 PRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGF 120
Query: 298 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
GFVTMS ELN+AI+ALDGQNL+GRAIRVNVAE+R R +
Sbjct: 121 GFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 162
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 6/88 (6%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+++VGNLP+DVD+ +L LF + G V A V+Y+RET RSRGFGFVTMS V+E +A+
Sbjct: 78 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 137
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPR 248
+++GR + VN A ER PR
Sbjct: 138 LDGQNLEGRAIRVNVAE------ERPPR 159
>gi|326516784|dbj|BAJ96384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 127/182 (69%), Positives = 159/182 (87%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EPPE+AK++VGNLPYDVDSE+LA LF++AG VE+AEVIYNRE+ +SRGFGFVTMST+EEA
Sbjct: 100 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 159
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
+KA+E F+RYDI GRLL VN+AA RG++ ER PR F FR YVGNLPW+ +++RL Q+F
Sbjct: 160 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRRFASSFRAYVGNLPWQAEDSRLVQMF 219
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
SEHG+VVNA +VYDRETGRSRGFGFVTM+S+ +L+ AI+ALDGQ +DGR +RVNVA +R
Sbjct: 220 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERP 279
Query: 335 RR 336
+R
Sbjct: 280 QR 281
>gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 125/182 (68%), Positives = 159/182 (87%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EPPE+AK++VGNLPYDVDSE+LA LF++AG VE+AEVIYN+E+ +SRGFGFVTMST+EEA
Sbjct: 100 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNKESGQSRGFGFVTMSTIEEA 159
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
+KA+E F+RY+I GRLL VN+AA RG++ ER PR F FR YVGNLPW+ +++RL Q+F
Sbjct: 160 DKAIETFNRYNISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 219
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
SEHG+VVNA +VYDRETGRSRGFGFVTM+S+ +L+ AI+ALDGQ +DGR +RVNVA +R
Sbjct: 220 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERP 279
Query: 335 RR 336
+R
Sbjct: 280 QR 281
>gi|219885617|gb|ACL53183.1| unknown [Zea mays]
Length = 275
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 170/214 (79%), Gaps = 14/214 (6%)
Query: 109 ENQGADETEGNLSDWGEPEGEDTVVEAGERQE--ESGEEGVFEEEEF--VEPPEDAKLFV 164
E + ADE E E GE +EAGE +E SG EG E ++ VEPPE+AK++V
Sbjct: 63 EAKSADEEE-------EKAGEPVEMEAGEFEEVLASGGEG---EGQYAAVEPPEEAKVYV 112
Query: 165 GNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRY 224
GNLPYDVDSE LA +F++AG VE+AEVIYNRET +SRGFGFVTMSTVEEA+KA+EMF RY
Sbjct: 113 GNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEMFSRY 172
Query: 225 DIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 284
DI GRLL VN+A+ RGT+ ER R F P FR YVGNLPW+VD++RL Q+FSEHG+VV+A+
Sbjct: 173 DISGRLLNVNRASSRGTRMERPQRQFAPAFRAYVGNLPWQVDDSRLVQLFSEHGEVVDAK 232
Query: 285 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
VVYDRETGRSRGFGFV+M S+ ELNDAI+ALDGQ
Sbjct: 233 VVYDRETGRSRGFGFVSMVSKEELNDAISALDGQ 266
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGNLP++VD+ L Q+F + G V A V+Y+RETG+SRGFGFVTMS+ E + AI
Sbjct: 109 KVYVGNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEM 168
Query: 315 LDGQNLDGRAIRVNVAEDRQRR 336
++ GR + VN A R R
Sbjct: 169 FSRYDISGRLLNVNRASSRGTR 190
>gi|226533870|gb|ACO71288.1| cp31BHv [Triticum aestivum]
Length = 170
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/170 (70%), Positives = 149/170 (87%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E+AK++VGNLPYDVDSE+LA LF++AG VE+AEVIYNRE+ +SRGFGFVTMST+EEA+KA
Sbjct: 1 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 60
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+E F+RYDI GRLL VN+AA RG++ ER PR F FR YVGNLPW+ +++RL Q+FSEH
Sbjct: 61 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQLFSEH 120
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
G+VVNA VVYDRETGRSRGFGFVTM+S+ +L+ AI+ALDGQ +DGR +RV
Sbjct: 121 GEVVNATVVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 170
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGNLP++VD+ RL Q+F + G V A V+Y+RE+G+SRGFGFVTMS+ E + AI
Sbjct: 4 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 63
Query: 315 LDGQNLDGRAIRVNVAEDRQRR 336
+ ++ GR + VN A R R
Sbjct: 64 FNRYDISGRLLNVNRAAQRGSR 85
>gi|116787606|gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/186 (66%), Positives = 151/186 (81%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
E EFVE PE KLFVGNLP+++D+++L LFE AG V +I +RET SRGFGFVTM
Sbjct: 103 ENEFVELPEGTKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMG 162
Query: 210 TVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNAR 269
TVEEAEK VE+F+R+ ++GRLLTVNKAAPRGT+ ER + +IYVGNLPW+ D+
Sbjct: 163 TVEEAEKGVELFNRHSLEGRLLTVNKAAPRGTKVERPSQAGSSTNKIYVGNLPWQADDNS 222
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L Q+FSEHGKV+ ARVVYDRETGRSRGFGFVT SSE+E+NDAIAALDG ++DGR +RVN+
Sbjct: 223 LLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDAIAALDGTDMDGRPLRVNI 282
Query: 330 AEDRQR 335
AEDR+R
Sbjct: 283 AEDRRR 288
>gi|116788830|gb|ABK25016.1| unknown [Picea sitchensis]
Length = 290
Score = 253 bits (646), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/186 (66%), Positives = 151/186 (81%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
E EFVE PE KLFVGNLP+++D+++L LFE AG V +I +RET SRGFGFVTM
Sbjct: 103 ENEFVELPEWTKLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMG 162
Query: 210 TVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNAR 269
TVEEAEK VE+F+R+ ++GRLLTVNKAAPRGT+ ER + +IYVGNLPW+ D+
Sbjct: 163 TVEEAEKGVELFNRHSLEGRLLTVNKAAPRGTKVERPSQAGSSTNKIYVGNLPWQADDNS 222
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L Q+FSEHGKV+ ARVVYDRETGRSRGFGFVT SSE+E+NDAIAALDG ++DGR +RVN+
Sbjct: 223 LLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDAIAALDGTDMDGRPLRVNI 282
Query: 330 AEDRQR 335
AEDR+R
Sbjct: 283 AEDRRR 288
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 136/189 (71%), Gaps = 10/189 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+D KLFVGNLP++VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTMS+++E E A
Sbjct: 90 QDLKLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAA 149
Query: 218 VEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRVFEP--------GFRIYVGNLPWEVDN 267
+ F+ Y+++GR L VN P R + R+PR G R+YVGNL W VDN
Sbjct: 150 AQQFNGYELEGRALRVNSGPPPQRESSFSRSPRFGGGGGGGESLEGNRLYVGNLSWSVDN 209
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
LE FSE GKVV+A+VVYDRE+GRSRGFGFVT SS E+ +AI +L+G LDGRAIRV
Sbjct: 210 LALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAIDSLNGAELDGRAIRV 269
Query: 328 NVAEDRQRR 336
+VAE R RR
Sbjct: 270 SVAEARPRR 278
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 58/90 (64%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
F +++VGNLP+ VD+A+L +F G V V+YD+ TGRSRGFGFVTMSS E+
Sbjct: 88 FSQDLKLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVE 147
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
A +G L+GRA+RVN QR SSF
Sbjct: 148 AAAQQFNGYELEGRALRVNSGPPPQRESSF 177
>gi|224140195|ref|XP_002323470.1| predicted protein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 138/184 (75%), Gaps = 5/184 (2%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+D KLFVGNLP++VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTM+T+EE E A
Sbjct: 88 QDLKLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAA 147
Query: 218 VEMFHRYDIDGRLLTVNKAAP--RGTQPERAPR---VFEPGFRIYVGNLPWEVDNARLEQ 272
+ F+ Y++DGR L VN P + + R PR F+ G R+YVGNL W VDN LE
Sbjct: 148 SKQFNGYELDGRTLRVNFGPPPQKESSFSRGPRGGETFDSGNRVYVGNLSWNVDNLALET 207
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
+F E G+V++A+VVYDR++GRSRGFGFVT SS E+++AI +L+G LDGRAIRV+VAE
Sbjct: 208 LFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEEVDNAIDSLNGAELDGRAIRVSVAEA 267
Query: 333 RQRR 336
+ RR
Sbjct: 268 KPRR 271
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 57/90 (63%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
F +++VGNLP+ VD+ARL +F G V V+YD+ TGRSRGFGFVTM++ E+
Sbjct: 86 FSQDLKLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVE 145
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
A +G LDGR +RVN Q+ SSF
Sbjct: 146 AASKQFNGYELDGRTLRVNFGPPPQKESSF 175
>gi|125559266|gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group]
Length = 259
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 135/185 (72%), Gaps = 6/185 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+FVGNLP+ VDS +LA LFE+AG+VE+ EV+Y+R+T RSRGFGFVTMST EEA A
Sbjct: 73 EDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAA 132
Query: 218 VEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRV----FEPGFRIYVGNLPWEVDNARLE 271
VE F+ Y GR L VN P R R+PR F+ ++YVGNL W VDN+ LE
Sbjct: 133 VEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLE 192
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+FSE G V++A+V+YDRE+GRSRGFGFVT S E+N+AI+ LDG +LDGR IRV VAE
Sbjct: 193 NLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAE 252
Query: 332 DRQRR 336
+ RR
Sbjct: 253 SKPRR 257
>gi|115473531|ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza
sativa Japonica Group]
gi|113611900|dbj|BAF22278.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|125601192|gb|EAZ40768.1| hypothetical protein OsJ_25244 [Oryza sativa Japonica Group]
Length = 264
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 135/185 (72%), Gaps = 6/185 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+FVGNLP+ VDS +LA LFE+AG+VE+ EV+Y+R+T RSRGFGFVTMST EEA A
Sbjct: 78 EDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAA 137
Query: 218 VEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRV----FEPGFRIYVGNLPWEVDNARLE 271
VE F+ Y GR L VN P R R+PR F+ ++YVGNL W VDN+ LE
Sbjct: 138 VEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLE 197
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+FSE G V++A+V+YDRE+GRSRGFGFVT S E+N+AI+ LDG +LDGR IRV VAE
Sbjct: 198 NLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAE 257
Query: 332 DRQRR 336
+ RR
Sbjct: 258 SKPRR 262
>gi|414887732|tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea mays]
Length = 267
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 143/208 (68%), Gaps = 14/208 (6%)
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRS 200
E G EG E++ E ED KLFVGNLP+ VDS +LA LFE+AG+VE+ EV+Y+R T RS
Sbjct: 60 EYGTEGA--EQQDGEFSEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRS 117
Query: 201 RGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPR---------- 248
RGFGFVTMS+ EEA AVE F+ Y GR L VN P R RAPR
Sbjct: 118 RGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDGSAPRAPRGGGGGGGGGS 177
Query: 249 VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
+ G ++YVGNL W VDN+ LE +FSE G+V++A+V+YDR++GRSRGFGFVT S E+
Sbjct: 178 FVDSGNKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAEEV 237
Query: 309 NDAIAALDGQNLDGRAIRVNVAEDRQRR 336
N+AI+ LDG +LDGR IRV VAE + RR
Sbjct: 238 NNAISNLDGIDLDGRQIRVTVAESKPRR 265
>gi|149392545|gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 205
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 135/185 (72%), Gaps = 6/185 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+FVGNLP+ VDS +LA LFE+AG+VE+ EV+Y+R+T RSRGFGFVTMST EEA A
Sbjct: 19 EDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAA 78
Query: 218 VEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRV----FEPGFRIYVGNLPWEVDNARLE 271
+E F+ Y GR L VN P R R+PR F+ ++YVGNL W VDN+ LE
Sbjct: 79 IEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLE 138
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+FSE G V++A+V+YDRE+GRSRGFGFVT S E+N+AI+ LDG +LDGR IRV VAE
Sbjct: 139 NLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAE 198
Query: 332 DRQRR 336
+ RR
Sbjct: 199 SKPRR 203
>gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 145/221 (65%), Gaps = 16/221 (7%)
Query: 133 VEAGERQEESG---EEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIA 189
VEAG+ EE G +EG EE P D K+FVGNLP+ VDS LA LFE+AG VE+
Sbjct: 71 VEAGDDDEEEGGLSDEGASYEERNANP--DLKIFVGNLPFSVDSAALAELFERAGDVEMV 128
Query: 190 EVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK--AAPR-------- 239
EVIY++ T RSRGFGFVTMS+ E E A + F+ Y+IDGR L VN A P+
Sbjct: 129 EVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPAPPKRENSFGDN 188
Query: 240 -GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 298
Q R + R+YVGNL W VD +LE +FSE GKVV+A+VVYDR++GRSRGFG
Sbjct: 189 SSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRGFG 248
Query: 299 FVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
FVT SS E+NDAI +LDG +L GRAIRV+ AE R R F
Sbjct: 249 FVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEARPPRRQF 289
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 137/192 (71%), Gaps = 7/192 (3%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
EEEF ED ++FVGNLP+ VDS +LA LFE+AG+VE+ EVIY++ T RSRGFGFVTMS
Sbjct: 76 EEEF---SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMS 132
Query: 210 TVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRVFEPGFRIYVGNLPWEVDN 267
+V+E E AVE F+ Y +DGR L VN P R +R PR R+YVGNL W VDN
Sbjct: 133 SVQEVEAAVEQFNGYVLDGRSLRVNSGPPPPRDPSSQRGPR--GDANRVYVGNLSWGVDN 190
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+ L +FSE G+V+ AR+VYDRE+GRSRGFGFVT S E+ +AI+ LDG +LDGR IRV
Sbjct: 191 SALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGSAEEVENAISNLDGSDLDGRQIRV 250
Query: 328 NVAEDRQRRSSF 339
VAE + R F
Sbjct: 251 TVAESKPPRRQF 262
>gi|357121842|ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 275
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 133/189 (70%), Gaps = 11/189 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED KLFVGNLP+ VDS +LA LFE+AG+VE+ EV+Y+R T RSRGFGFVTMST EE A
Sbjct: 82 EDLKLFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSTAEEVSAA 141
Query: 218 VEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRV---------FEPGFRIYVGNLPWEVD 266
VE F+ Y GR L VN P R R PR F+ G ++YVGNL W VD
Sbjct: 142 VEQFNGYTFQGRPLRVNSGPPPPRDEFAPRTPRGMGGGGGGGSFDSGNKLYVGNLSWGVD 201
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
N+ LE +FSE GKV++A+V+YDR++GRSRGFGFVT S E+N+AI+ LDG +LDGR IR
Sbjct: 202 NSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIR 261
Query: 327 VNVAEDRQR 335
V VAE + R
Sbjct: 262 VTVAESKPR 270
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+VGNL + VD+ L LF + G V A+VIY+R++ RSRGFGFVT + +E A+
Sbjct: 190 KLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISN 249
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPER 245
D+DGR + V A + +P R
Sbjct: 250 LDGVDLDGRQIRVTVAESKPREPRR 274
>gi|242046410|ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
gi|241924453|gb|EER97597.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
Length = 268
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 133/190 (70%), Gaps = 12/190 (6%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D KLFVGNLP+ VDS +LA LFE+AG+VE+ EV+Y+R T RSRGFGFVTMS+ EEA AV
Sbjct: 77 DLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAAV 136
Query: 219 EMFHRYDIDGRLLTVNKAAP--RGTQPERAPR----------VFEPGFRIYVGNLPWEVD 266
E F+ Y GR L VN P R RAPR + ++YVGNL W VD
Sbjct: 137 EQFNGYTFQGRPLRVNCGPPPPRDESAPRAPRGGGGGGGGGSFVDSANKVYVGNLAWGVD 196
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
N+ LE +FSE G+V++A+V+YDRE+GRSRGFGFVT + E+N+AI+ LDG +LDGR IR
Sbjct: 197 NSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGTAAEVNNAISNLDGIDLDGRQIR 256
Query: 327 VNVAEDRQRR 336
V VAE + RR
Sbjct: 257 VTVAESKPRR 266
>gi|326510421|dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510771|dbj|BAJ91733.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 133/192 (69%), Gaps = 11/192 (5%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E ED K+FVGNLP+ VDS +LA LFE+AG+VE+ EV+Y+R T RSRGFGFVTM +VEE
Sbjct: 82 EYSEDLKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEV 141
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRV---------FEPGFRIYVGNLPW 263
AVE F+ Y GR L VN P R R PR F+ ++YVGNL W
Sbjct: 142 AAAVEQFNGYTFQGRPLRVNSGPPPPRDEFAPRTPRAMGGGGGGGSFDSANKLYVGNLSW 201
Query: 264 EVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGR 323
VDN+ LE +FSE GKV++A+V+YDR++GRSRGFGFVT S E+N+AI+ LDG +LDGR
Sbjct: 202 GVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGR 261
Query: 324 AIRVNVAEDRQR 335
IRV VAE + R
Sbjct: 262 QIRVTVAESKPR 273
>gi|12230585|sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
Full=CP29B; Flags: Precursor
gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris]
Length = 291
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/228 (50%), Positives = 146/228 (64%), Gaps = 29/228 (12%)
Query: 138 RQEESGEEGVFEEEEFVEPP---EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYN 194
R SG + + ++ E E P ED KLFVGNLP+ VDS LA LFE+AG VE+ EVIY+
Sbjct: 62 RVALSGFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYD 121
Query: 195 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-AP-----------RGTQ 242
+ T RSRGFGFVTMST EE E A + F+ Y+IDGR + VN AP RG
Sbjct: 122 KLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGN 181
Query: 243 PE--------------RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYD 288
R R + R+YVGNL W VD+ L+++FSE G VV+A+VVYD
Sbjct: 182 SSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYD 241
Query: 289 RETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
R++GRSRGFGFVT SS E+NDAI +L+G +LDGR+IRV+ AE+R RR
Sbjct: 242 RDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERPRR 289
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 247 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
PR F +++VGNLP+ VD+A L +F G V V+YD+ TGRSRGFGFVTMS++
Sbjct: 81 PR-FSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139
Query: 307 ELNDAIAALDGQNLDGRAIRVNV--AEDRQRRSSF 339
E+ A +G +DGRAIRVN A ++ SSF
Sbjct: 140 EVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSF 174
>gi|115453241|ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|108708430|gb|ABF96225.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|125586437|gb|EAZ27101.1| hypothetical protein OsJ_11032 [Oryza sativa Japonica Group]
gi|215697052|dbj|BAG91046.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766568|dbj|BAG98727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 133/184 (72%), Gaps = 4/184 (2%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+D ++FVGNLP+ VDS +LA LFE+AG+VE+ EVIY++ T RSRGFGFVTMS+VEE E A
Sbjct: 84 DDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAA 143
Query: 218 VEMFHRYDIDGRLLTVNKA--APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
VE F+ Y +DGR L VN PR +RAPR R+YVGNL W VDNA L +FS
Sbjct: 144 VEQFNGYILDGRSLRVNSGPPPPREQSSQRAPR--GEANRVYVGNLSWGVDNAALANLFS 201
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G+V+ A+V+YDRE+GRSRGFGFVT S E+ +A++ LDG ++DGR IRV VAE +
Sbjct: 202 GEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVAESKPP 261
Query: 336 RSSF 339
R +
Sbjct: 262 RRQY 265
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 134/186 (72%), Gaps = 6/186 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED ++FVGNLP+ VDS +LA LFE+AG+VE+ EVIY++ T RSRGFGFVTMS+VEE E A
Sbjct: 79 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVA 138
Query: 218 VEMFHRYDIDGRLLTVNKAAP----RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
V+ F+ Y +DGR L VN P R ++ + PR R+YVGNL W VDN+ L +
Sbjct: 139 VDQFNGYVLDGRSLRVNSGPPPPRDRSSRSPQRPR--GDANRVYVGNLSWGVDNSALANL 196
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FSE G+V+ AR++YDRE+GRSRGFGFVT S E+ +AI+ LDG +LDGR IRV VAE +
Sbjct: 197 FSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESK 256
Query: 334 QRRSSF 339
R +
Sbjct: 257 PPRQQY 262
>gi|1350821|sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP31; Flags: Precursor
gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia]
Length = 292
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 141/217 (64%), Gaps = 29/217 (13%)
Query: 149 EEEEFVEPP---EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGF 205
++ E E P ED KLFVGNLP+ VDS LA LFE+AG VEI EVIY++ + RSRGFGF
Sbjct: 74 DDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGF 133
Query: 206 VTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-AP-----------RGTQPE--------- 244
VTMST EE E A + F+ Y+IDGR + VN AP RG
Sbjct: 134 VTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNS 193
Query: 245 -----RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 299
R R + R+YVGNL W VD+ L+++FSE G VV+A+VVYDR++GRSRGFGF
Sbjct: 194 SFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGF 253
Query: 300 VTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
VT SS E+NDAI +L+G +LDGR+IRV+ AE+R RR
Sbjct: 254 VTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERPRR 290
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 247 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
PR F +++VGNLP+ VD+A L +F G V V+YD+ +GRSRGFGFVTMS++
Sbjct: 82 PR-FSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140
Query: 307 ELNDAIAALDGQNLDGRAIRVNV--AEDRQRRSSF 339
E+ A +G +DGRAIRVN A ++ SSF
Sbjct: 141 EVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSF 175
>gi|225440003|ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
vinifera]
Length = 288
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 132/198 (66%), Gaps = 20/198 (10%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D KLFVGNLP++VDS LA LFE+AG VE+ EVIY++ T RSRGFGFVTMSTVEE E A
Sbjct: 89 DLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAA 148
Query: 219 EMFHRYDIDGRLLTVNKAAP---------RGTQPE--------RAPRV---FEPGFRIYV 258
+ F+ Y+++GR L VN P RG R PR RIYV
Sbjct: 149 QQFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRGENTNFRGPRGGANLNSTNRIYV 208
Query: 259 GNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
GNL W VD+ LE +FSE GKV ARV+YDRETGRSRGFGFVT +S E+N AI +LDG
Sbjct: 209 GNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGV 268
Query: 319 NLDGRAIRVNVAEDRQRR 336
+L+GR+IRV +AE R RR
Sbjct: 269 DLNGRSIRVTMAEARPRR 286
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 55/87 (63%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
F P +++VGNLP+ VD+A L +F + G V V+YD+ TGRSRGFGFVTMS+ E+
Sbjct: 86 FSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVE 145
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRR 336
A +G L+GR +RVN RR
Sbjct: 146 AAAQQFNGYELEGRQLRVNSGPPPARR 172
>gi|125544079|gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 132/184 (71%), Gaps = 4/184 (2%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+D ++FVGNLP+ VDS +LA LFE+AG+VE+ EVIY++ T RSRGFGFVTMS+VEE E A
Sbjct: 84 DDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAA 143
Query: 218 VEMFHRYDIDGRLLTVNKA--APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
VE F+ Y +DGR L VN PR RAPR R+YVGNL W VDNA L +FS
Sbjct: 144 VEQFNGYILDGRSLRVNSGPPPPREQSSRRAPR--GEANRVYVGNLSWGVDNAALANLFS 201
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G+V+ A+V+YDRE+GRSRGFGFVT S E+ +A++ LDG ++DGR IRV VAE +
Sbjct: 202 GEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVAESKPP 261
Query: 336 RSSF 339
R +
Sbjct: 262 RRQY 265
>gi|12230584|sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor
gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/210 (53%), Positives = 139/210 (66%), Gaps = 18/210 (8%)
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRS 200
E G++GV EE F D K+FVGNLP+ DS LA LFE+AG VE+ EVIY++ T RS
Sbjct: 71 EDGDDGVEEERNF---SPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRS 127
Query: 201 RGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF------ 254
RGFGFVTMS+ EE E A + F+ Y++DGR L VN P PE+ G
Sbjct: 128 RGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPP----PEKRENSSFRGGSRGGGS 183
Query: 255 -----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
R+YVGNL W VD LE +FSE GKVV+A+VVYDR++GRSRGFGFVT SS E+N
Sbjct: 184 FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVN 243
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
+AI +LDG +L+GRAIRV+ AE R R F
Sbjct: 244 NAIESLDGVDLNGRAIRVSPAEARPPRRQF 273
>gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia oleracea]
Length = 220
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 141/205 (68%), Gaps = 19/205 (9%)
Query: 148 FEEEEFVEPPEDA----------KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRET 197
FE+EE V +DA K+FVGNLP++VDS +LA LF AGTVE+ EVIY++ T
Sbjct: 16 FEQEEDVMGDDDAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGAAGTVEMVEVIYDKLT 75
Query: 198 DRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV------FE 251
RSRGFGFVTMS+VEE E A + F+ Y++DGR L V + + + PRV F
Sbjct: 76 GRSRGFGFVTMSSVEEVEAAAQQFNNYELDGRTLRVTEDSHKDMT---LPRVESECDSFG 132
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
R++VGNL W+VD+ L+ +FSE G VV A+V+YDR+TGRSRGFGFVT +S E+N A
Sbjct: 133 SSNRVHVGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSANEVNTA 192
Query: 312 IAALDGQNLDGRAIRVNVAEDRQRR 336
I +LDG +L+GR+IRV AE RQRR
Sbjct: 193 IESLDGVDLNGRSIRVTAAEARQRR 217
>gi|224069480|ref|XP_002326357.1| predicted protein [Populus trichocarpa]
gi|222833550|gb|EEE72027.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 141/210 (67%), Gaps = 17/210 (8%)
Query: 144 EEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGF 203
EE VF + + D +LFVGNLP++V+S +LA LF+ AG VE+ EV Y++ T RSRGF
Sbjct: 75 EEDVFGDGDEPSFSPDLQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGF 134
Query: 204 GFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPR------------- 248
GFVTMST+EE E A + F+ Y++DGR L VN P R T R P+
Sbjct: 135 GFVTMSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQRETSFSRLPQRENSFSRGPGARG 194
Query: 249 --VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
F+ R+YVGNL W VD++ LE +F E GKV++A+VVYDR++GRS+GFGFVT SS
Sbjct: 195 GETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGRSKGFGFVTYSSAE 254
Query: 307 ELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
E+ DA+ +L+G LDGRAIRV+VAE + RR
Sbjct: 255 EVEDAVDSLNGAELDGRAIRVSVAEAKPRR 284
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 57/90 (63%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
F P +++VGNLP+ V++A+L +F G V V YD+ TGRSRGFGFVTMS+ E+
Sbjct: 87 FSPDLQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEVE 146
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
A +G LDGR +RVN QR +SF
Sbjct: 147 AASQQFNGYELDGRPLRVNSGPPPQRETSF 176
>gi|42407940|dbj|BAD09079.1| nucleic acid-binding protein-like [Oryza sativa Japonica Group]
Length = 131
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/129 (71%), Positives = 114/129 (88%)
Query: 208 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDN 267
MST+EEA+KA+EM +RYDI+GRLL VN+AAPRG++ ER PR F P FR YVGNLPW+VD+
Sbjct: 1 MSTIEEADKAIEMLNRYDINGRLLNVNRAAPRGSRVERPPRQFAPAFRAYVGNLPWQVDD 60
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+RL Q+FSEHG+VVNA VVYDRE+GRSRGFGFV+M+S+ EL+DAI+ALDGQ LDGR +RV
Sbjct: 61 SRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRV 120
Query: 328 NVAEDRQRR 336
NVA +R +R
Sbjct: 121 NVAAERPQR 129
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ +VGNLP+ VD +L LF + G V A V+Y+RE+ RSRGFGFV+M++ EE + A+
Sbjct: 48 RAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISA 107
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERA 246
++DGR L VN AA R P+R
Sbjct: 108 LDGQELDGRPLRVNVAAER---PQRG 130
>gi|226502782|ref|NP_001151728.1| ribonucleoprotein A [Zea mays]
gi|195649373|gb|ACG44154.1| ribonucleoprotein A [Zea mays]
gi|414591006|tpg|DAA41577.1| TPA: ribonucleoprotein A [Zea mays]
Length = 268
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 144/211 (68%), Gaps = 17/211 (8%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
E E+ GE+G EEF ED KLFVGNLP+ VDS +LA LFE+AG+VE+ EV+Y+R
Sbjct: 62 EGAEQEGEDG---SEEF---SEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRM 115
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPR------ 248
T RSRGFGFVTMS+ EEAE AVE F+ Y GR L VN P R RAPR
Sbjct: 116 TGRSRGFGFVTMSSAEEAEAAVEQFNGYAFQGRQLRVNCGPPPPRDESTPRAPRGGGGGG 175
Query: 249 ---VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 305
+ ++YVGNL W VDN+ LE +FSE G+V++A+V+YDR++GRSRGFGFVT S
Sbjct: 176 GGGFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSA 235
Query: 306 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
E+N+AI+ LDG +LDGR IRV AE + RR
Sbjct: 236 QEVNNAISNLDGIDLDGRQIRVTAAESKPRR 266
>gi|356533254|ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 275
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 131/191 (68%), Gaps = 14/191 (7%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D KLFVGNLP++VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTMS+VEEAE A
Sbjct: 85 DLKLFVGNLPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAA 144
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-------------RIYVGNLPWEV 265
+ F+ Y++DGR L VN P E APR R++V NL W V
Sbjct: 145 QQFNGYELDGRALRVNSGPPPARN-ESAPRFRGGSSFGSRGGGPSDSENRVHVSNLAWGV 203
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
DN L+ +F E G V+ ARV+YDRE+GRSRGFGFVT SS E+N AI +L+G +L+GRAI
Sbjct: 204 DNVALKSLFREQGNVLEARVIYDRESGRSRGFGFVTFSSPDEVNSAIQSLNGVDLNGRAI 263
Query: 326 RVNVAEDRQRR 336
RV++A+ + ++
Sbjct: 264 RVSLADSKPKQ 274
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 54/79 (68%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
F P +++VGNLP+ VD+A+L ++F G V V+YD+ TGRSRGFGFVTMSS E
Sbjct: 82 FSPDLKLFVGNLPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAE 141
Query: 310 DAIAALDGQNLDGRAIRVN 328
A +G LDGRA+RVN
Sbjct: 142 AAAQQFNGYELDGRALRVN 160
>gi|116786296|gb|ABK24055.1| unknown [Picea sitchensis]
Length = 299
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 134/187 (71%), Gaps = 9/187 (4%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P + K+FVGNLP+ VDS +LA LF+ +G V + EVIY+R+T RSRGF FVTM+T +A+
Sbjct: 109 PSANLKVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADAD 168
Query: 216 KAVEMFHRYDIDGRLLTVNKA--------APRGT-QPERAPRVFEPGFRIYVGNLPWEVD 266
+AVE F+ Y+ GR L VN APRG + E+ + R++VGNLPW D
Sbjct: 169 EAVEKFNGYEYQGRTLRVNSGPPPPKDSFAPRGGFRNEKPSGNYNSANRVFVGNLPWGAD 228
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
+ LEQ+FS+HGKV+ A+VVYDRETGRSRGFGFVT+SS E+ +AI++LDG ++DGR I+
Sbjct: 229 DLSLEQLFSDHGKVMEAKVVYDRETGRSRGFGFVTLSSPQEIEEAISSLDGSDMDGRQIK 288
Query: 327 VNVAEDR 333
V +AE +
Sbjct: 289 VTLAETK 295
>gi|15228102|ref|NP_181259.1| ribonucleoprotein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName: Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor
gi|13877809|gb|AAK43982.1|AF370167_1 putative RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|15081717|gb|AAK82513.1| At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20197716|gb|AAM15222.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 289
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 137/218 (62%), Gaps = 27/218 (12%)
Query: 149 EEEEF--VEPPE------DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRS 200
EE+ F V PP+ D KLFVGNLP++VDS +LA LFE AG VE+ EVIY++ T RS
Sbjct: 72 EEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRS 131
Query: 201 RGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP---RGTQPERAPRVFEPGF--- 254
RGFGFVTMS+V E E A + F+ Y++DGR L VN P R R PR
Sbjct: 132 RGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSG 191
Query: 255 -------------RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 301
R+YVGNL W VD+ LE +FSE GKVV ARV+YDR++GRS+GFGFVT
Sbjct: 192 YGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVT 251
Query: 302 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
S E+ +AI +LDG +LDGR IRV+ AE R R +
Sbjct: 252 YDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289
>gi|21617920|gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 137/218 (62%), Gaps = 27/218 (12%)
Query: 149 EEEEF--VEPPE------DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRS 200
EE+ F V PP+ D KLFVGNLP++VDS +LA LFE AG VE+ EVIY++ T RS
Sbjct: 72 EEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRS 131
Query: 201 RGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP---RGTQPERAPRVFEPGF--- 254
RGFGFVTMS+V E E A + F+ Y++DGR L VN P R R PR
Sbjct: 132 RGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSG 191
Query: 255 -------------RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 301
R+YVGNL W VD+ LE +FSE GKVV ARV+YDR++GRS+GFGFVT
Sbjct: 192 YGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVT 251
Query: 302 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
S E+ +AI +LDG +LDGR IRV+ AE R R +
Sbjct: 252 YDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289
>gi|116793682|gb|ABK26841.1| unknown [Picea sitchensis]
Length = 347
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 140/206 (67%), Gaps = 10/206 (4%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
E E E+ E +++ PE KL+VGNLP+D+DSE LA +F+++G VE+ EVIY+R
Sbjct: 136 EEPESKPEQESVEGQDYPPLPEGTKLYVGNLPFDIDSEGLAKMFDESGVVEMVEVIYDRS 195
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPR---GTQPERAPRVFEP 252
+ RSRGF FVTMSTVEEAE A++ F+ ++IDGR L VN PR G P R+P F
Sbjct: 196 SGRSRGFAFVTMSTVEEAEAAIKKFNGFEIDGRSLRVNFPEVPRLQNGRSPARSPSNFG- 254
Query: 253 GF-----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 307
GF ++YVGNL W V + L + + G V+ A+V+ DRETGRSRGFGFV+ SSE E
Sbjct: 255 GFVDSPHKVYVGNLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFVSFSSEAE 314
Query: 308 LNDAIAALDGQNLDGRAIRVNVAEDR 333
+ A++ +DG ++GR+IRVNVA+ R
Sbjct: 315 VEAAVSEMDGLEVEGRSIRVNVAKSR 340
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVE 212
FV+ P K++VGNL + V SE L G V A+VI +RET RSRGFGFV+ S+
Sbjct: 256 FVDSPH--KVYVGNLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFVSFSSEA 313
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 242
E E AV +++GR + VN A R T+
Sbjct: 314 EVEAAVSEMDGLEVEGRSIRVNVAKSRSTE 343
>gi|413921822|gb|AFW61754.1| hypothetical protein ZEAMMB73_478558 [Zea mays]
Length = 131
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 111/129 (86%)
Query: 208 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDN 267
MSTVEEA+KA+EMF RYDI GRLL VN+A+ RGT+ ER R F P FR YVGNLPW+VD+
Sbjct: 1 MSTVEEADKAIEMFSRYDISGRLLNVNRASSRGTRMERPQRQFAPAFRAYVGNLPWQVDD 60
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+RL Q+FSEHG+VV+A+VVYDRETGRSRGFGFV+M S+ ELNDAI+ALDGQ LDGR +RV
Sbjct: 61 SRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISALDGQELDGRPLRV 120
Query: 328 NVAEDRQRR 336
NVA +R +R
Sbjct: 121 NVAAERPQR 129
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ +VGNLP+ VD +L LF + G V A+V+Y+RET RSRGFGFV+M + EE A+
Sbjct: 48 RAYVGNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISA 107
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERA 246
++DGR L VN AA R P+R
Sbjct: 108 LDGQELDGRPLRVNVAAER---PQRG 130
>gi|116781814|gb|ABK22250.1| unknown [Picea sitchensis]
Length = 355
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 140/206 (67%), Gaps = 10/206 (4%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
E E E+ E +++ PE KL+VGNLP+D+DSE LA +F+++G VE+ EVIY+R
Sbjct: 144 EEPESKPEQESVEGQDYPPLPEGTKLYVGNLPFDIDSEGLAKMFDESGVVEMVEVIYDRS 203
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPR---GTQPERAPRVFEP 252
+ RSRGF FVTMSTVEEAE A++ F+ ++IDGR L VN PR G P R+P F
Sbjct: 204 SGRSRGFAFVTMSTVEEAEAAIKKFNGFEIDGRSLRVNFPEVPRLQNGRSPARSPSNFG- 262
Query: 253 GF-----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 307
GF ++YVGNL W V + L + + G V+ A+V+ DRETGRSRGFGFV+ SSE E
Sbjct: 263 GFVDSPHKVYVGNLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFVSFSSEAE 322
Query: 308 LNDAIAALDGQNLDGRAIRVNVAEDR 333
+ A++ +DG ++GR+IRVNVA+ R
Sbjct: 323 VEAAVSEMDGLEVEGRSIRVNVAKSR 348
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVE 212
FV+ P K++VGNL + V SE L G V A+VI +RET RSRGFGFV+ S+
Sbjct: 264 FVDSPH--KVYVGNLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFVSFSSEA 321
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 242
E E AV +++GR + VN A R T+
Sbjct: 322 EVEAAVSEMDGLEVEGRSIRVNVAKSRSTE 351
>gi|414866997|tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
Length = 262
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 131/198 (66%), Gaps = 24/198 (12%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E +D ++FVGNLP+ VDS +LA LFE+AG+VE+ EVIY++ T RSRGFGFVTMS+VEE
Sbjct: 76 EFSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEV 135
Query: 215 EKAVEMFHRYDIDGRLLTVNKAA-------------PRGTQPERAPRVFEPGFRIYVGNL 261
E AV+ F+ Y +DGR L VN PRG R+YVGNL
Sbjct: 136 EVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSPSPQRPRGDAN-----------RVYVGNL 184
Query: 262 PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLD 321
W VDN+ L +FSE G+V+ AR++YDRE+GRSRGFGFVT S E+ +AI+ LDG +LD
Sbjct: 185 SWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLD 244
Query: 322 GRAIRVNVAEDRQRRSSF 339
GR IRV VAE + R +
Sbjct: 245 GRQIRVTVAESKPPRQQY 262
>gi|226492142|ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays]
gi|195620768|gb|ACG32214.1| ribonucleoprotein A [Zea mays]
Length = 264
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 131/198 (66%), Gaps = 24/198 (12%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E +D ++FVGNLP+ VDS +LA LFE+AG+VE+ EVIY++ T RSRGFGFVTMS+VEE
Sbjct: 78 EFSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEV 137
Query: 215 EKAVEMFHRYDIDGRLLTVNKAA-------------PRGTQPERAPRVFEPGFRIYVGNL 261
E AV+ F+ Y +DGR L VN PRG R+YVGNL
Sbjct: 138 EVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSPSPQRPRGDAN-----------RVYVGNL 186
Query: 262 PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLD 321
W VDN+ L +FSE G+V+ AR++YDRE+GRSRGFGFVT S E+ +AI+ LDG +LD
Sbjct: 187 SWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLD 246
Query: 322 GRAIRVNVAEDRQRRSSF 339
GR IRV VAE + R +
Sbjct: 247 GRQIRVTVAESKPPRQQY 264
>gi|359806184|ref|NP_001240946.1| uncharacterized protein LOC100812934 [Glycine max]
gi|255639723|gb|ACU20155.1| unknown [Glycine max]
Length = 279
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 130/192 (67%), Gaps = 15/192 (7%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D KLFVGNLP+ VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTMS+VEEAE A
Sbjct: 88 DLKLFVGNLPFSVDSARLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAA 147
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-------------RIYVGNLPWEV 265
+ F+ Y++DGR L VN P E APR R++VGNL W V
Sbjct: 148 KQFNGYELDGRSLRVNSGPPPARN-ESAPRFRGGSSFGSRGGGPSDSENRVHVGNLAWGV 206
Query: 266 DNARLEQVFSEHG-KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
D+ LE +F E G KV+ ARV+YDRE+GRSRGFGFVT S E+ AI +LDG +L+GRA
Sbjct: 207 DDVALESLFREQGKKVLEARVIYDRESGRSRGFGFVTFGSPDEVKSAIQSLDGVDLNGRA 266
Query: 325 IRVNVAEDRQRR 336
IRV++A+ + +R
Sbjct: 267 IRVSLADSKPKR 278
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
F +++VGNLP+ VD+ARL ++F G V V+YD+ TGRSRGFGFVTMSS E
Sbjct: 85 FSRDLKLFVGNLPFSVDSARLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAE 144
Query: 310 DAIAALDGQNLDGRAIRVN 328
A +G LDGR++RVN
Sbjct: 145 AAAKQFNGYELDGRSLRVN 163
>gi|217072826|gb|ACJ84773.1| unknown [Medicago truncatula]
Length = 232
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 101/158 (63%), Positives = 113/158 (71%), Gaps = 12/158 (7%)
Query: 114 DETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDS 173
DE G DW EP + E G G FVEPPEDAKLFVGN P+DVDS
Sbjct: 72 DEEAGLSLDW-EPTADAAETETGADDSAEGY--------FVEPPEDAKLFVGNFPFDVDS 122
Query: 174 EKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV 233
EKLAMLF +AGTVEIAEVIYNR+TD SRGFGFVTM+TVEEAE AVE F+ YD +GR L V
Sbjct: 123 EKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMNTVEEAESAVEKFNGYDYNGRSLVV 182
Query: 234 NKAAPRGTQP---ERAPRVFEPGFRIYVGNLPWEVDNA 268
NKA+P+G++P ERAPR FEP RIYV NL WEVDN+
Sbjct: 183 NKASPKGSRPERTERAPRTFEPVLRIYVANLAWEVDNS 220
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 54/82 (65%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VGN P++VD+ +L +F + G V A V+Y+R+T SRGFGFVTM++ E A+
Sbjct: 110 KLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMNTVEEAESAVEK 169
Query: 315 LDGQNLDGRAIRVNVAEDRQRR 336
+G + +GR++ VN A + R
Sbjct: 170 FNGYDYNGRSLVVNKASPKGSR 191
>gi|297827229|ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
gi|297327336|gb|EFH57756.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 129/200 (64%), Gaps = 19/200 (9%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D KLFVGNLP++VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTMS+V E E A
Sbjct: 90 DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVEAAA 149
Query: 219 EMFHRYDIDGRLLTVNKAAP---RGTQPERAPRVFEPGF----------------RIYVG 259
F+ Y++DGR L VN P R R PR R+YVG
Sbjct: 150 NQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVG 209
Query: 260 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 319
NL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT +S E+ +AI +L+G +
Sbjct: 210 NLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINSLNGAD 269
Query: 320 LDGRAIRVNVAEDRQRRSSF 339
LDGR IRV+ AE R R F
Sbjct: 270 LDGRQIRVSEAEARPPRRQF 289
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 56/87 (64%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
F +++VGNLP+ VD+A+L Q+F G V V+YD+ TGRSRGFGFVTMSS +E+
Sbjct: 87 FSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVE 146
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRR 336
A +G LDGR +RVN +R
Sbjct: 147 AAANQFNGYELDGRPLRVNAGPPPPKR 173
>gi|449440111|ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449483348|ref|XP_004156563.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 128/190 (67%), Gaps = 12/190 (6%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D KLFVGNLP+ VDS +LA LFE AG VE EVIY++ T RSRGFGFVTMSTV E E A
Sbjct: 92 DLKLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAA 151
Query: 219 EMFHRYDIDGRLLTVNKAAP---------RGTQPERAPRVFEPGFRIYVGNLPWEVDNAR 269
+ F+ Y++DGRLL VN P RG+ R F+ R++V NL W VD+
Sbjct: 152 QQFNGYELDGRLLRVNYGPPPPKRDDSSFRGS---RNASRFDNRNRVHVSNLAWGVDDLT 208
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
LE +F E G V+ A+VVYDR++G+SRGFGFVT +S E+N+AI +LDG +LDGR IRV
Sbjct: 209 LENLFREKGNVLEAKVVYDRDSGKSRGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQ 268
Query: 330 AEDRQRRSSF 339
AE R R F
Sbjct: 269 AEARPPRRQF 278
>gi|1350820|sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor
gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 130/194 (67%), Gaps = 13/194 (6%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D K+FVGNL + DS LA LFE+AG VE+ EVIY++ T RSRGFGFVTMS+ EE E A
Sbjct: 86 DLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAAC 145
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAPR-------------VFEPGFRIYVGNLPWEV 265
+ F+ Y++DGR L VN P + + R F+ R+YVGNL W V
Sbjct: 146 QQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGV 205
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
D LE +FSE GKVV+A+VVYDR++GRSRGFGFVT SS E+N+AI +LDG +L+GRAI
Sbjct: 206 DQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAI 265
Query: 326 RVNVAEDRQRRSSF 339
RV+ AE R R F
Sbjct: 266 RVSPAEARPPRRQF 279
>gi|357112177|ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/207 (52%), Positives = 138/207 (66%), Gaps = 18/207 (8%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
EE E ED ++FVGNLP+ VDS +LA LFE+AG+VE+ EVIY++ T RSRGFGFVTMS
Sbjct: 67 EESAGEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMS 126
Query: 210 TVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----PGF----------- 254
TVEE E+AVE + Y +DGR + VN P + + +PR F GF
Sbjct: 127 TVEEVEEAVEQLNGYVLDGRTIKVNSGPPP-PRDQSSPRGFREQSSGGFRQQSSRGPSGG 185
Query: 255 --RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
R+YVGNL W VD++ L +F+E G V+ ARV+YDRE+GRSRGFGFVT S E+ A+
Sbjct: 186 DNRVYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGSSEEVEKAV 245
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRSSF 339
+ LDG +LDGR IRV VAE RQ R +
Sbjct: 246 SNLDGTDLDGRQIRVTVAEARQPRREY 272
>gi|326503656|dbj|BAJ86334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 105/198 (53%), Positives = 135/198 (68%), Gaps = 17/198 (8%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED ++FVGNLP+ VDS +LA LFE+AG+VE+ EVIY++ T RSRGFGFVTMSTVEE E+A
Sbjct: 72 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 131
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---PGF-------------RIYVGNL 261
VE + Y +DGR L VN P + + +PR F GF R+YVGNL
Sbjct: 132 VERLNGYVLDGRALKVNSGPPP-PKDQSSPRGFREQSGGFRQQSSRGPSGGDNRVYVGNL 190
Query: 262 PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLD 321
W VD++ L +F+E G V+ ARV+YDRE+GRSRGFGFVT + E+ A++ LDG ++D
Sbjct: 191 SWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGTSDEVQKAVSNLDGTDMD 250
Query: 322 GRAIRVNVAEDRQRRSSF 339
GR IRV VAE RQ R +
Sbjct: 251 GRQIRVTVAEARQPRREY 268
>gi|168029395|ref|XP_001767211.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681466|gb|EDQ67892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 129/186 (69%), Gaps = 13/186 (6%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL++GNLP+ DS +LA + ++ G+VE+ EVIY++E+ RSRGF FVTM+T E+AE +E
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60
Query: 221 FHRYDIDGRLLTVN--------KAAPRGTQPERAPRVFEPGFR-----IYVGNLPWEVDN 267
+D+ GR L V+ + PRG +R+ R P R ++VGNL W VDN
Sbjct: 61 LDGHDVGGRPLKVSFPQSKQNRPSFPRGEGYQRSERAPRPAARDDPNKVFVGNLSWGVDN 120
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L+++FS++GKVV+ARVVYDRE+GRSRGFGFVT S +E++ AI +LDG DGR +RV
Sbjct: 121 GALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDSLDGAEFDGRELRV 180
Query: 328 NVAEDR 333
N+A ++
Sbjct: 181 NLAGNK 186
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++Y+GNLPW+ D+A+L + E G V V+YD+E+GRSRGF FVTM+++ + + I
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSSF 339
LDG ++ GR ++V+ + +Q R SF
Sbjct: 61 LDGHDVGGRPLKVSFPQSKQNRPSF 85
>gi|357440407|ref|XP_003590481.1| 30 kDa ribonucleoprotein [Medicago truncatula]
gi|355479529|gb|AES60732.1| 30 kDa ribonucleoprotein [Medicago truncatula]
gi|388503166|gb|AFK39649.1| unknown [Medicago truncatula]
Length = 280
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 126/194 (64%), Gaps = 18/194 (9%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+LFVGNLP+ VDS +LA +FE AG VE+ EVIY++ T RSRGFGFVTMS+ E E A +
Sbjct: 85 RLFVGNLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAAEVEAAAQQ 144
Query: 221 FHRYDIDGRLLTVNKAAPR----------------GTQPERAPR--VFEPGFRIYVGNLP 262
+ Y +DGR L VN P G +P PR + R++VGNL
Sbjct: 145 LNGYVVDGRELRVNAGPPPPPRSENSRFGENPRFGGDRPRGPPRGGSSDGDNRVHVGNLA 204
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
W VDN LE +F E G+V+ A+V+YDRE+GRSRGFGFVT SS E++ AI LDG +L+G
Sbjct: 205 WGVDNLALESLFGEQGQVLEAKVIYDRESGRSRGFGFVTFSSADEVDSAIRTLDGADLNG 264
Query: 323 RAIRVNVAEDRQRR 336
RAIRV+ A+ R +R
Sbjct: 265 RAIRVSPADSRPKR 278
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
+ P R++VGNLP+ VD+A+L ++F G V V+YD+ TGRSRGFGFVTMSS E+
Sbjct: 80 YSPNQRLFVGNLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAAEVE 139
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRRS 337
A L+G +DGR +RVN RS
Sbjct: 140 AAAQQLNGYVVDGRELRVNAGPPPPPRS 167
>gi|326512018|dbj|BAJ95990.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 830
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 130/183 (71%), Gaps = 5/183 (2%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A ++V NLPY +D+E L + F+ AG V ++VIY+RE RSRGFG+VTM+TV+EAEKA
Sbjct: 567 EGATVYVRNLPYHLDNEGLKLNFQHAGVVLFSKVIYDREIGRSRGFGYVTMNTVQEAEKA 626
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG--FRIYVGNLPWEVDNARLEQVFS 275
V ++H ++ GR LTV+ AAPRG A R + G RI+V NLP +VDN+RLE++F+
Sbjct: 627 VRIYHGSEVHGRRLTVSIAAPRGGTWVGATR-SQSGSPLRIFVCNLPSQVDNSRLEELFN 685
Query: 276 EHGKVVNARVVYDRETGR--SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+HG+VV+ARV+Y+R G SRGFGFVTM+++ E AI AL+ Q L+ + V VA +R
Sbjct: 686 KHGQVVDARVIYERREGASCSRGFGFVTMATDEESYKAIRALNKQVLEEHTLVVRVARER 745
Query: 334 QRR 336
R
Sbjct: 746 PDR 748
>gi|217073784|gb|ACJ85252.1| unknown [Medicago truncatula]
Length = 280
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 126/194 (64%), Gaps = 18/194 (9%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+LFVG+LP+ VDS +LA +FE AG VE+ EVIY++ T RSRGFGFVTMS+ E E A +
Sbjct: 85 RLFVGSLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAAEVEAAAQQ 144
Query: 221 FHRYDIDGRLLTVNKAAPR----------------GTQPERAPR--VFEPGFRIYVGNLP 262
+ Y +DGR L VN P G +P PR + R++VGNL
Sbjct: 145 LNGYVVDGRELRVNAGPPPPPRSENSRFGENPRFGGDRPRGPPRGGSSDGDNRVHVGNLA 204
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
W VDN LE +F E G+V+ A+V+YDRE+GRSRGFGFVT SS E++ AI LDG +L+G
Sbjct: 205 WGVDNLALESLFGEQGQVLEAKVIYDRESGRSRGFGFVTFSSADEVDSAIRTLDGADLNG 264
Query: 323 RAIRVNVAEDRQRR 336
RAIRV+ A+ R +R
Sbjct: 265 RAIRVSPADSRPKR 278
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
+ P R++VG+LP+ VD+A+L ++F G V V+YD+ TGRSRGFGFVTMSS E+
Sbjct: 80 YSPNQRLFVGSLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAAEVE 139
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRRS 337
A L+G +DGR +RVN RS
Sbjct: 140 AAAQQLNGYVVDGRELRVNAGPPPPPRS 167
>gi|296083731|emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 122/187 (65%), Gaps = 9/187 (4%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
EE E P + KL+ GNLPY DS +LA + + G+ E+ EV+YNR+T RSRGF FVTMS+
Sbjct: 102 EEGAESPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSS 161
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDN 267
VE+ +E + GR L VN K P + P E ++++VGNL W V +
Sbjct: 162 VEDCNAVIENLDGSEYGGRTLRVNFSDKPKP------KLPLYPETEYKLFVGNLSWSVTS 215
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L QVF E+G V+ ARV+YD ETGRSRG+GFV S++ E++ A+ +L+G L+GRAIR+
Sbjct: 216 ESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRI 275
Query: 328 NVAEDRQ 334
++A+ R+
Sbjct: 276 SLAQGRR 282
>gi|224099981|ref|XP_002311696.1| predicted protein [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus trichocarpa]
gi|222851516|gb|EEE89063.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 123/179 (68%), Gaps = 5/179 (2%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P + KL+ GNLPY+VDS +LA + ++ GT E+ EV+Y+RET RSRGF FVTMS++E+ E
Sbjct: 104 PVNTKLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCET 163
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
+E GR+L VN A +P+ + P E +++++GNL W V + L Q F
Sbjct: 164 VIENLDGSQYMGRILRVNFA----DKPKPKEPLYPETEYKLFIGNLSWSVTSESLTQAFQ 219
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
E+G VV ARV+YD ETG+SRG+GFV S++ EL A+ +L+G L+GRA+RV++AE R+
Sbjct: 220 EYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETALQSLNGVELEGRALRVSLAEGRK 278
>gi|388499174|gb|AFK37653.1| unknown [Lotus japonicus]
Length = 302
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 130/217 (59%), Gaps = 41/217 (18%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D K+FVGNLP+ VDS +LA LF+ AG VE+ EVIY++ T SRGF FVTMS+ EAE A
Sbjct: 86 DHKVFVGNLPFSVDSAQLAELFQDAGNVEVVEVIYDKTTGNSRGFAFVTMSSAAEAEVAA 145
Query: 219 EMFHRYDIDGRLLTVNKAAP-----RGTQPERAPRVFEPGF------------------- 254
+ F+ Y+++GR L VN P RG PR F
Sbjct: 146 QQFNNYELEGRALRVNSGPPPKNENRGFNEN--PRFRNNSFNRGGSDSYRGGSDGYRGGG 203
Query: 255 ---------------RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 299
R++VGNL W VDNA LE +F E G+VV+A+V+YDRE+GRSRGFGF
Sbjct: 204 SDGYRGGGSSSYSENRVHVGNLAWGVDNAALESLFREQGRVVDAKVIYDRESGRSRGFGF 263
Query: 300 VTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
VT SS E+N AI +LDG +L+GRAI+V+ A+ + +R
Sbjct: 264 VTFSSPDEVNSAIRSLDGADLNGRAIKVSQADSKPKR 300
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%)
Query: 248 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 307
R F P +++VGNLP+ VD+A+L ++F + G V V+YD+ TG SRGF FVTMSS E
Sbjct: 81 RSFAPDHKVFVGNLPFSVDSAQLAELFQDAGNVEVVEVIYDKTTGNSRGFAFVTMSSAAE 140
Query: 308 LNDAIAALDGQNLDGRAIRVN 328
A + L+GRA+RVN
Sbjct: 141 AEVAAQQFNNYELEGRALRVN 161
>gi|224107511|ref|XP_002314506.1| predicted protein [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 121/181 (66%), Gaps = 5/181 (2%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E P + KL+ GNLPY+VDS +LA + ++ G+ E+ EV+Y+RET RSRGF FVTMS++E+
Sbjct: 102 EIPVNTKLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYHRETGRSRGFAFVTMSSIEDC 161
Query: 215 EKAVEMFHRYDIDGRLLTVNKA-APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+E GR+L VN + P+ +P E ++++VGNL W + L Q
Sbjct: 162 NAVIENLDESQYMGRILRVNFSDNPKPKEPLYP----ETEYKLFVGNLSWSATSESLTQA 217
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F E+G VV ARV+YD ETG+SRG+GFV S++ E+ A+ +LDG L+GRA+RV++AE R
Sbjct: 218 FQEYGNVVGARVLYDGETGKSRGYGFVCYSTKAEMQTALVSLDGVELEGRALRVSLAEGR 277
Query: 334 Q 334
+
Sbjct: 278 K 278
>gi|357128483|ref|XP_003565902.1| PREDICTED: uncharacterized protein LOC100828680 [Brachypodium
distachyon]
Length = 357
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 123/193 (63%), Gaps = 14/193 (7%)
Query: 125 EPEGEDTVVE---AGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFE 181
PE + VV RQ+E EE E+EE+ P + L+VGNL + +D E LA LFE
Sbjct: 169 HPEKQQNVVYPTMLSPRQQECDEEYTSEDEEYYGPAAEGTLYVGNLRHHIDDEYLAQLFE 228
Query: 182 KAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 241
G VE +E++Y+RET +SRG+G+VTMSTVEEAE AV FHR ++ G+L+TV +P
Sbjct: 229 NVGIVEFSEILYDRETGQSRGYGYVTMSTVEEAEMAVNTFHRRELYGKLMTVEMRSP--- 285
Query: 242 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG--RSRGFGF 299
R+P RI+VGNLP EVD + L +FSEHG+VV+ +V Y G RSR FGF
Sbjct: 286 HQHRSP------VRIFVGNLPCEVDGSMLNLLFSEHGQVVDTKVAYGYVKGVWRSRRFGF 339
Query: 300 VTMSSETELNDAI 312
VTM++ E +DAI
Sbjct: 340 VTMATREESDDAI 352
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+YVGNL +D+ L Q+F G V + ++YDRETG+SRG+G+VTMS+ E A+
Sbjct: 209 LYVGNLRHHIDDEYLAQLFENVGIVEFSEILYDRETGQSRGYGYVTMSTVEEAEMAVNTF 268
Query: 316 DGQNLDGRAIRVNVAEDRQRRS 337
+ L G+ + V + Q RS
Sbjct: 269 HRRELYGKLMTVEMRSPHQHRS 290
>gi|225433269|ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
Length = 751
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 116/180 (64%), Gaps = 9/180 (5%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
EE E P + KL+ GNLPY DS +LA + + G+ E+ EV+YNR+T RSRGF FVTMS+
Sbjct: 102 EEGAESPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSS 161
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDN 267
VE+ +E + GR L VN K P + P E ++++VGNL W V +
Sbjct: 162 VEDCNAVIENLDGSEYGGRTLRVNFSDKPKP------KLPLYPETEYKLFVGNLSWSVTS 215
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L QVF E+G V+ ARV+YD ETGRSRG+GFV S++ E++ A+ +L+G L+GRAIRV
Sbjct: 216 ESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRV 275
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++Y GNLP+ D+A+L + +G V+Y+R+TGRSRGF FVTMSS + N I
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171
Query: 315 LDGQNLDGRAIRVNVAE 331
LDG GR +RVN ++
Sbjct: 172 LDGSEYGGRTLRVNFSD 188
>gi|226532108|ref|NP_001142375.1| uncharacterized protein LOC100274547 [Zea mays]
gi|194708524|gb|ACF88346.1| unknown [Zea mays]
Length = 163
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 109/161 (67%), Gaps = 12/161 (7%)
Query: 188 IAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPER 245
+ EV+Y+R T RSRGFGFVTMS+ EEA AVE F+ Y GR L VN P R R
Sbjct: 1 MVEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDGSAPR 60
Query: 246 APR----------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 295
APR + G ++YVGNL W VDN+ LE +FSE G+V++A+V+YDR++GRSR
Sbjct: 61 APRGGGGGGGGGSFVDSGNKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSR 120
Query: 296 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
GFGFVT S E+N+AI+ LDG +LDGR IRV VAE + RR
Sbjct: 121 GFGFVTYGSAEEVNNAISNLDGIDLDGRQIRVTVAESKPRR 161
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K++VGNL + VD+ L LF + G V A+VIY+R++ RSRGFGFVT + EE A+
Sbjct: 80 KVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAEEVNNAISN 139
Query: 221 FHRYDIDGRLL--TVNKAAPR 239
D+DGR + TV ++ PR
Sbjct: 140 LDGIDLDGRQIRVTVAESKPR 160
>gi|168033890|ref|XP_001769447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679367|gb|EDQ65816.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 123/189 (65%), Gaps = 7/189 (3%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFV 206
V EEE+F + KL+VGNLP+ DS +LA + GTV++ EVIY++ + RSRGF FV
Sbjct: 36 VAEEEQF-----ETKLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKISGRSRGFAFV 90
Query: 207 TMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP--ERAPRVFEPGFRIYVGNLPWE 264
TM+T E+A+ + D+ GR L VN + +P ER+ R + +++VGNL W
Sbjct: 91 TMATPEDAQAVINALDGTDMGGRPLKVNYPQSQKDKPRVERSERPRDDANKLFVGNLSWG 150
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
D A L FSE+G VV+A+VV+DR++GRSRGFGFVTM S N AI LDG LDGR
Sbjct: 151 CDEAALYSFFSEYGTVVDAKVVFDRDSGRSRGFGFVTMESAAAANAAIENLDGAELDGRR 210
Query: 325 IRVNVAEDR 333
+RVN+A ++
Sbjct: 211 LRVNLAGEK 219
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 233 VNKAAPRGTQPERAPRVFEPGF--RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRE 290
V+ A G+ AP E F ++YVGNLPW D+A+L ++ S+HG V V+YD+
Sbjct: 21 VDSVADGGSSDVAAPVAEEEQFETKLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKI 80
Query: 291 TGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+GRSRGF FVTM++ + I ALDG ++ GR ++VN + ++ +
Sbjct: 81 SGRSRGFAFVTMATPEDAQAVINALDGTDMGGRPLKVNYPQSQKDK 126
>gi|297837519|ref|XP_002886641.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
gi|297332482|gb|EFH62900.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
Length = 252
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 121/188 (64%), Gaps = 4/188 (2%)
Query: 149 EEEEFVEPPE--DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFV 206
EEE+ ++PP + KL+ GNLPY+VDS LA + + E+ EV+YNR+T +SRGF FV
Sbjct: 66 EEEKDLDPPAAINTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFV 125
Query: 207 TMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVD 266
TMS VE+ ++ + GR L VN A +P + P E +++VGNL W V
Sbjct: 126 TMSNVEDCNIIIDNLDGTEYLGRALKVNFA--DKPKPNKEPLYPETEHKLFVGNLSWTVT 183
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
+ L + F E G VV ARVVYD +TGRSRG+GFV SS+ E+ A+ +LDG L+GRAIR
Sbjct: 184 SESLAEAFRECGDVVGARVVYDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIR 243
Query: 327 VNVAEDRQ 334
VN+A+ ++
Sbjct: 244 VNLAQGKK 251
>gi|302822192|ref|XP_002992755.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
gi|300139400|gb|EFJ06141.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
Length = 177
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 122/174 (70%), Gaps = 2/174 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTV-EIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
++++VGNL ++ DSE+LA + ++AG + + EV+ +RET RSRGFG+VT+++++ A+ AV
Sbjct: 1 SRIYVGNLSWNCDSEELAKVLQQAGILAHVEEVVCDRETGRSRGFGYVTLTSIDFAQVAV 60
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAP-RVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+ + + GR L + + P + P V ++++GNLPW VD+ LE+ F H
Sbjct: 61 QKLDGHIVQGRALKASFSQPYKKAGKEGPVEVAASHTKVFIGNLPWGVDDGSLEEFFRAH 120
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
GKVV A++VYDR+TGRSRGFGFVT+SS E ++A+ +LDG + DGR +RV +A+
Sbjct: 121 GKVVEAKIVYDRDTGRSRGFGFVTLSSPKEADEAVKSLDGADCDGRRLRVKLAD 174
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 125/185 (67%), Gaps = 11/185 (5%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P K+++GNLP+ DS +LA + ++ G+VE+ EVIY++ T RSRGF F TMS+VE+A
Sbjct: 108 PAGTKVYLGNLPFSCDSAELAGIIQEHGSVEMVEVIYDQNTGRSRGFAFATMSSVEDANA 167
Query: 217 AVEMFHRYDIDGRLLTVN--KAAPRG--------TQPERAPRVFEPG-FRIYVGNLPWEV 265
VE GR L VN + A R ++ E+ + G R+Y+GNL W+V
Sbjct: 168 LVENLDGSQYGGRTLRVNLREEASRSLRVNLRDKSRSEQRNQTNNDGQHRVYIGNLSWDV 227
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
+ L +VFSEHG +++A++V+DRETGRSRGFGF+T S+++E A+A+L+G+ L+GRA+
Sbjct: 228 NEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAAVASLNGKELEGRAM 287
Query: 326 RVNVA 330
RV++A
Sbjct: 288 RVDLA 292
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 246 APRVFEP------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 299
AP + EP G ++Y+GNLP+ D+A L + EHG V V+YD+ TGRSRGF F
Sbjct: 97 APEISEPLHDIPAGTKVYLGNLPFSCDSAELAGIIQEHGSVEMVEVIYDQNTGRSRGFAF 156
Query: 300 VTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
TMSS + N + LDG GR +RVN+ E+ R
Sbjct: 157 ATMSSVEDANALVENLDGSQYGGRTLRVNLREEASR 192
>gi|302758260|ref|XP_002962553.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
gi|300169414|gb|EFJ36016.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
Length = 177
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 121/174 (69%), Gaps = 2/174 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTV-EIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
++++VGNL ++ DSE+LA + ++AG + + EV+ +RET RSRGFG+VT+++++ A+ AV
Sbjct: 1 SRIYVGNLSWNCDSEELAKVLQQAGILAHVEEVVCDRETGRSRGFGYVTLTSIDFAQVAV 60
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAP-RVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+ + + GR L + + P + P V ++++GNLPW VD+ LE+ F H
Sbjct: 61 QKLDGHIVQGRALKASYSQPYKKAGKEGPVEVAASHTKVFIGNLPWGVDDGSLEEFFRAH 120
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
GKVV ++VYDR+TGRSRGFGFVT+SS E ++A+ +LDG + DGR +RV +A+
Sbjct: 121 GKVVEVKIVYDRDTGRSRGFGFVTLSSPKEADEAVKSLDGADCDGRRLRVKLAD 174
>gi|356534904|ref|XP_003535991.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 117/175 (66%), Gaps = 5/175 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+ GNLPY VDS KLA L + G+ E+ EV+Y+R++ +SRGF FVTMS +E+ +E
Sbjct: 111 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDSGKSRGFAFVTMSCIEDCNAVIEN 170
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
+ GR L VN + ++P+ + P E +++VGNL W V N L Q F E+G
Sbjct: 171 LDGKEFLGRTLRVNFS----SKPKPKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGT 226
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
VV ARV+YD ETGRSRG+GFV S++ E+ A+AAL+ L+GRA+RV++A+ ++
Sbjct: 227 VVGARVLYDGETGRSRGYGFVCYSTQAEMEAAVAALNDVELEGRAMRVSLAQGKR 281
>gi|388500434|gb|AFK38283.1| unknown [Lotus japonicus]
Length = 273
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 117/177 (66%), Gaps = 5/177 (2%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
+ KL+ GNLPY VDS +LA L E+ G+ E+ EV+Y+R++ +SRGF FVTMS VE+ +
Sbjct: 100 NTKLYFGNLPYSVDSAQLAGLIEEYGSAELIEVLYDRDSGKSRGFAFVTMSCVEDCNTVI 159
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
E + GR L VN + +P+ + P E +++VGNL W V + L QVF E+
Sbjct: 160 ENLDGKEFLGRTLRVNLS----DKPKPKEPLYPETEHKLFVGNLSWTVTSESLIQVFQEY 215
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G VV ARV+YD ETGRSRG+GFV S +EL A+ +L+ L+GRAIRV++AE ++
Sbjct: 216 GTVVGARVLYDGETGRSRGYGFVCYSKRSELETALISLNNVELEGRAIRVSLAEGKR 272
>gi|558629|emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulgaris]
Length = 287
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+ GNLPY VDS KLA L + G+ E+ EV+Y+R+T +SRGF FVTMS +E+ +E
Sbjct: 114 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 173
Query: 221 FHRYDIDGRLLTVNKA-APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
+ GR L VN + P+ +P E +++VGNL W V N L Q F E+G
Sbjct: 174 LDGKEYLGRTLRVNFSNKPKAKEPLYP----ETEHKLFVGNLSWSVTNEILTQAFQEYGT 229
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
VV ARV+YD ETGRSRG+GFV S++ E+ A+ AL+ L+GRA+RV++AE ++
Sbjct: 230 VVGARVLYDGETGRSRGYGFVCFSTKEEMEAALGALNDVELEGRAMRVSLAEGKR 284
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
+ +E + P + KLFVGNL + V +E L F++ GTV A V+Y+ ET RSRG+GFV
Sbjct: 193 KAKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCF 252
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 242
ST EE E A+ + +++GR + V+ A + Q
Sbjct: 253 STKEEMEAALGALNDVELEGRAMRVSLAEGKRAQ 286
>gi|255574887|ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 285
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 118/179 (65%), Gaps = 9/179 (5%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
+ KL+ GNLPY+VDS +LA + + GT E+ EV+Y+R+T RSRGF FVTMSTVE+ +
Sbjct: 112 NTKLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVI 171
Query: 219 EMFHRYDIDGRLLTVN---KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
E GR+L VN K P + P E +++VGNL W V + L + F
Sbjct: 172 ENLDGSQFMGRILRVNFSDKPKP------KEPLYPETEHKLFVGNLSWSVTSESLVEAFQ 225
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
E+G +V ARV+YD ETGRSRG+GFV ++ +E+ +A+ +L+G L+GRA+RV++A+ ++
Sbjct: 226 EYGNIVGARVLYDGETGRSRGYGFVCYATRSEMENALVSLNGVELEGRAMRVSLAQGKK 284
>gi|297816516|ref|XP_002876141.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
gi|297321979|gb|EFH52400.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
Length = 330
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 122/187 (65%), Gaps = 9/187 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E+ +L+VGNLPY + S +L+ LF +AG V +++Y++ TDRSRGFGFVTM T+EEA++A
Sbjct: 115 EEGRLYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEA 174
Query: 218 VEMFHRYDIDGRLLTVNKA-APRGTQPE--------RAPRVFEPGFRIYVGNLPWEVDNA 268
++MF+ I GR + VN PRG + E + +IY GNL W + +
Sbjct: 175 IQMFNSSQIGGRTVKVNLPEVPRGGEREVMRTKIRDNNRSYVDSPHKIYAGNLGWNLTSQ 234
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
L+ F + V+ A+V+Y+R TGRSRGFGF++ S ++ A+A ++G ++GRA+R+N
Sbjct: 235 GLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAEDVQSALATMNGVEVEGRALRLN 294
Query: 329 VAEDRQR 335
+A +R+R
Sbjct: 295 LASERER 301
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVE 212
+V+ P K++ GNL +++ S+ L F V A+VIY R T RSRGFGF++ + E
Sbjct: 215 YVDSPH--KIYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAE 272
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 253
+ + A+ + +++GR L +N A+ R +P +P E G
Sbjct: 273 DVQSALATMNGVEVEGRALRLNLASER-ERPTVSPPSVEEG 312
>gi|2104687|emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba var. minor]
Length = 289
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 128/199 (64%), Gaps = 9/199 (4%)
Query: 136 GERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNR 195
G+ ++E+GEE V EE+ KL+ GNLPY VDS KLA L E+ G+ E+ EV+Y+R
Sbjct: 99 GQGEKENGEEIVAEEDT------RTKLYFGNLPYSVDSAKLAGLIEEYGSAELVEVLYDR 152
Query: 196 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 255
+T +SRGF F TM+ VE+ + +E + GR L VN + + P E ++
Sbjct: 153 DTGKSRGFAFATMTCVEDCKAVIENLDGKEFMGRTLRVNFSDKPKAKESLYP---ETEYK 209
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+++GNL W+V + L + F EHG VV ARV+YD ETG SRG+GFV+ ++++E+ A+ +
Sbjct: 210 LFIGNLSWKVTSEILTEAFQEHGTVVGARVIYDGETGNSRGYGFVSYANKSEMEAALTIM 269
Query: 316 DGQNLDGRAIRVNVAEDRQ 334
+ L+GRA+RV++A+ ++
Sbjct: 270 NDVELEGRALRVSLAQGKR 288
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++Y GNLP+ VD+A+L + E+G V+YDR+TG+SRGF F TM+ + I
Sbjct: 118 KLYFGNLPYSVDSAKLAGLIEEYGSAELVEVLYDRDTGKSRGFAFATMTCVEDCKAVIEN 177
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSSF 339
LDG+ GR +RVN ++ + + S
Sbjct: 178 LDGKEFMGRTLRVNFSDKPKAKESL 202
>gi|15218972|ref|NP_176208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13194798|gb|AAK15561.1|AF348590_1 putative nucleic acid-binding protein [Arabidopsis thaliana]
gi|4249379|gb|AAD14476.1| Strong similarity to gb|X82030 chloroplast RNA binding protein
(RNP1) from Phaseolus vulgaris [Arabidopsis thaliana]
gi|21593720|gb|AAM65687.1| nucleic acid-binding protein, putative [Arabidopsis thaliana]
gi|222423361|dbj|BAH19654.1| AT1G60000 [Arabidopsis thaliana]
gi|332195527|gb|AEE33648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 258
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 126/209 (60%), Gaps = 12/209 (5%)
Query: 129 EDTVVEAGERQEESGEEGVFEEEEFVEPPE--DAKLFVGNLPYDVDSEKLAMLFEKAGTV 186
E V+ E +++ G V ++PP + KL+ GNLPY+VDS LA + +
Sbjct: 58 ETITVKLEEEEKDDGASAV------LDPPAAVNTKLYFGNLPYNVDSATLAQIIQDFANP 111
Query: 187 EIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APRGTQPER 245
E+ EV+YNR+T +SRGF FVTMS VE+ ++ + GR L VN A P+ P +
Sbjct: 112 ELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADKPK---PNK 168
Query: 246 APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 305
P E +++VGNL W V + L F E G VV ARVV+D +TGRSRG+GFV SS+
Sbjct: 169 EPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSK 228
Query: 306 TELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
E+ A+ +LDG L+GRAIRVN+A+ ++
Sbjct: 229 AEMETALESLDGFELEGRAIRVNLAQGKK 257
>gi|449432502|ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449487476|ref|XP_004157645.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 276
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 114/177 (64%), Gaps = 9/177 (5%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+ GNLPY VDS +LA + + G E+ EV+Y+R T +SRGF FVTMS++E+ K +E
Sbjct: 103 KLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIEN 162
Query: 221 FHRYDIDGRLLTVN---KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
GR+L VN K P+ P E ++++VGNL W V + L Q F E+
Sbjct: 163 LDGSAYMGRILRVNFSDKPKPK------EPLYPETEYKLFVGNLSWSVTSEILTQAFQEY 216
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G VV ARV+YD ETG+SRG+GFV+ S+++E+ A+ ++ L+GR IRV++AE +Q
Sbjct: 217 GNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGKQ 273
>gi|217073820|gb|ACJ85270.1| unknown [Medicago truncatula]
Length = 285
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 118/187 (63%), Gaps = 9/187 (4%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
E E KL+ GNLPY VDS LA L E+ G+ E+ EV+Y+R+T +SRGF FVTMS
Sbjct: 104 ETVAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSC 163
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDN 267
VE+ ++ + GR L VN K P+ P E ++++VGNL W V +
Sbjct: 164 VEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPK------EPLYPETEYKLFVGNLAWTVTS 217
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L Q F EHG VV ARV++D ETG+SRG+GFV+ ++++E++ A+A +D L+GR +RV
Sbjct: 218 ESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTALAIMDNVELEGRTLRV 277
Query: 328 NVAEDRQ 334
++A+ ++
Sbjct: 278 SLAQGKR 284
>gi|357439793|ref|XP_003590174.1| 31 kDa ribonucleoprotein [Medicago truncatula]
gi|355479222|gb|AES60425.1| 31 kDa ribonucleoprotein [Medicago truncatula]
Length = 387
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 118/187 (63%), Gaps = 9/187 (4%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
E E KL+ GNLPY VDS LA L E+ G+ E+ EV+Y+R+T +SRGF FVTMS
Sbjct: 206 ETVAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSC 265
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDN 267
VE+ ++ + GR L VN K P+ P E ++++VGNL W V +
Sbjct: 266 VEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPK------EPLYPETEYKLFVGNLAWTVTS 319
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L Q F EHG VV ARV++D ETG+SRG+GFV+ ++++E++ A+A +D L+GR +RV
Sbjct: 320 ESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTALAIMDNVELEGRTLRV 379
Query: 328 NVAEDRQ 334
++A+ ++
Sbjct: 380 SLAQGKR 386
>gi|17064758|gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana]
Length = 329
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 123/188 (65%), Gaps = 11/188 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E+ +L+VGNLPY + S +L+ +F +AGTV +++Y++ TDRSRGFGFVTM ++EEA+ A
Sbjct: 114 EEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKGA 173
Query: 218 VEMFHRYDIDGRLLTVN-KAAPRGTQPE---------RAPRVFEPGFRIYVGNLPWEVDN 267
++MF+ I GR + VN PRG + E V P ++Y GNL W++ +
Sbjct: 174 MQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSP-HKVYAGNLGWDLTS 232
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L+ F + V+ A+V+Y+R TGRSRGFGF++ S + A+A ++G ++GRA+R+
Sbjct: 233 QGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRL 292
Query: 328 NVAEDRQR 335
N+A +R++
Sbjct: 293 NLASEREK 300
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVE 212
+V+ P K++ GNL +D+ S+ L F V A+VIY R T RSRGFGF++ + E
Sbjct: 214 YVDSPH--KVYAGNLGWDLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAE 271
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 253
+ A+ + +++GR L +N A+ R +P +P E G
Sbjct: 272 NVQSALATMNGVEVEGRALRLNLASER-EKPTVSPPSVEEG 311
>gi|15231200|ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
gi|681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|4886289|emb|CAB43448.1| RNA-binding protein cp33 precursor [Arabidopsis thaliana]
gi|14517544|gb|AAK62662.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|18700226|gb|AAL77723.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|21553418|gb|AAM62511.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|332645419|gb|AEE78940.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
Length = 329
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 122/187 (65%), Gaps = 9/187 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E+ +L+VGNLPY + S +L+ +F +AGTV +++Y++ TDRSRGFGFVTM ++EEA++A
Sbjct: 114 EEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEA 173
Query: 218 VEMFHRYDIDGRLLTVN-KAAPRGTQPE--------RAPRVFEPGFRIYVGNLPWEVDNA 268
++MF+ I GR + VN PRG + E + ++Y GNL W + +
Sbjct: 174 MQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQ 233
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
L+ F + V+ A+V+Y+R TGRSRGFGF++ S + A+A ++G ++GRA+R+N
Sbjct: 234 GLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLN 293
Query: 329 VAEDRQR 335
+A +R++
Sbjct: 294 LASEREK 300
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVE 212
+V+ P K++ GNL +++ S+ L F V A+VIY R T RSRGFGF++ + E
Sbjct: 214 YVDSPH--KVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAE 271
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 253
+ A+ + +++GR L +N A+ R +P +P E G
Sbjct: 272 NVQSALATMNGVEVEGRALRLNLASER-EKPTVSPPSVEEG 311
>gi|681912|dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis thaliana]
Length = 321
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 122/187 (65%), Gaps = 9/187 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E+ +L+VGNLPY + S +L+ +F +AGTV +++Y++ TDRSRGFGFVTM ++EEA++A
Sbjct: 106 EEWRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEA 165
Query: 218 VEMFHRYDIDGRLLTVN-KAAPRGTQPE--------RAPRVFEPGFRIYVGNLPWEVDNA 268
++MF+ I GR + VN PRG + E + ++Y GNL W + +
Sbjct: 166 MQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQ 225
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
L+ F + V+ A+V+Y+R TGRSRGFGF++ S + A+A ++G ++GRA+R+N
Sbjct: 226 GLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLN 285
Query: 329 VAEDRQR 335
+A +R++
Sbjct: 286 LASEREK 292
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVE 212
+V+ P K++ GNL +++ S+ L F V A+VIY R T RSRGFGF++ + E
Sbjct: 206 YVDSPH--KVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAE 263
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 253
+ A+ + +++GR L +N A+ R +P +P E G
Sbjct: 264 NVQSALATMNGVEVEGRALRLNLASER-EKPTVSPPSVEEG 303
>gi|224138286|ref|XP_002322776.1| predicted protein [Populus trichocarpa]
gi|222867406|gb|EEF04537.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 125/193 (64%), Gaps = 17/193 (8%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
++ E+ KL+VGNLPY + S +LA +FE+AG V AEVI +R TDRSRGFGFVTM +VEE
Sbjct: 110 IKAREEGKLYVGNLPYSMTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEE 169
Query: 214 AEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERAPRVFEP-------GF-----RIYVGN 260
A++A+ MF+ + GR L VN PRG + E V EP GF +IY GN
Sbjct: 170 AKEAIRMFNGSQVGGRTLRVNFPEVPRGGERE----VMEPRIRSGYKGFIDSEHKIYAGN 225
Query: 261 LPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL 320
L W + + L F+ +++A+V+Y+R+TGRSRGFGFV+ S A+ A++G+ +
Sbjct: 226 LGWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGEEV 285
Query: 321 DGRAIRVNVAEDR 333
DGR +R+N+A +R
Sbjct: 286 DGRPLRLNLAGER 298
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K++ GNL + + SE L F + A+VIY R+T RSRGFGFV+ + E AE A+E
Sbjct: 220 KIYAGNLGWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEA 279
Query: 221 FHRYDIDGRLLTVNKAAPRGTQP 243
+ ++DGR L +N A R P
Sbjct: 280 MNGEEVDGRPLRLNLAGERSYPP 302
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 120/207 (57%), Gaps = 33/207 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+VGNL + D E L F + G V+ AEV+ +RE+ RSRGF FVTM++ + AEKA
Sbjct: 91 KLYVGNLAWSCDDEMLNQAFSQFGEVKAAEVVLDRESGRSRGFAFVTMASPDAAEKARRG 150
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRV---------------FEP--------GFRIY 257
++ GR + VN P+G ERAPR + P R+Y
Sbjct: 151 LDGTELAGRAIRVNFPQPKG---ERAPRAERGERSERSERSERTYTPRGDGEAGDANRLY 207
Query: 258 VGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDG 317
VGNLPW +D+ LE +F E G V ARVV DR++GRSRGF FV +S+ E N+A+A LDG
Sbjct: 208 VGNLPWSMDDGMLEDLFMEFGTVNYARVVMDRDSGRSRGFAFVALSTPEEANEAMANLDG 267
Query: 318 QNLDGRAIRVNVA-------EDRQRRS 337
+ + GR IRVN+A E R+RR+
Sbjct: 268 EEIGGRTIRVNLATKSSGNREGRERRA 294
>gi|302754352|ref|XP_002960600.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
gi|302771648|ref|XP_002969242.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300162718|gb|EFJ29330.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300171539|gb|EFJ38139.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
Length = 197
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 115/185 (62%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KL+VGN+ ++VDS+ LA F G E+ EV+Y+R +SRGF FVT+ST + A
Sbjct: 13 EPAPNTKLYVGNIAWNVDSKMLADCFNGVGITELEEVMYDRMLGKSRGFAFVTLSTEDAA 72
Query: 215 EKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERAPRVFEPGF-----RIYVGNLPWEVDNA 268
+ A+E ++++GR L VN PRG P + +V N+PW VD+
Sbjct: 73 KTAIEKLDGHELEGRPLRVNYPQVPRGGGGFGGGFGTRPSIPANPAKCFVANIPWSVDDQ 132
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
L++ FS HG VV+ R++ D E+GRSRG GFVT ++ E N+AI+ALDG L GR+IRV
Sbjct: 133 GLQEFFSSHGTVVDCRILTDAESGRSRGIGFVTFATPDEANNAISALDGAELGGRSIRVA 192
Query: 329 VAEDR 333
+A R
Sbjct: 193 LATGR 197
>gi|115449577|ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|47848169|dbj|BAD21996.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|113538031|dbj|BAF10414.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|125584133|gb|EAZ25064.1| hypothetical protein OsJ_08857 [Oryza sativa Japonica Group]
gi|215695143|dbj|BAG90334.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737594|dbj|BAG96724.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 316
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 117/175 (66%), Gaps = 5/175 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+ GNLPY+ DS +LA + + T E+ EV+Y+R T RSRGF FVTMST+E+ E+ ++
Sbjct: 146 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 205
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
GR + VN A +P+ + P E +++VGNL W V + L ++F + G
Sbjct: 206 LDGSLYSGRTMRVNFA----DKPKPKLPLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGN 261
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
VV ARV+YD ETGRSRG+GFV S++ E+++A+++L+G L+GR IRVN+A ++
Sbjct: 262 VVGARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNLALGKK 316
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 117/184 (63%), Gaps = 10/184 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+K++VGNLP+ DS +LA + + GTV++ EVIY++ + RSRGF FVTM++ ++A+ +
Sbjct: 23 SKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALIN 82
Query: 220 MFHRYDIDGRLLTVN-----KAAPRGTQPERAP-----RVFEPGFRIYVGNLPWEVDNAR 269
D+ GR L VN K PR + E P R + +++VGN+PW D A
Sbjct: 83 ALDGSDMGGRALKVNFPQSQKDKPRFEKSEARPPTADRRPRDDPNKLFVGNIPWGCDEAA 142
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
+ +FS +G VV+A++VYDR++GRSRGFGFVTM + A+ LDG LDGR +RVN
Sbjct: 143 MTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAMENLDGTELDGRELRVNF 202
Query: 330 AEDR 333
A ++
Sbjct: 203 AGEK 206
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 60/87 (68%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G ++YVGNLPW D+A+L ++ S+HG V V+YD+ +GRSRGF FVTM+S + I
Sbjct: 22 GSKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALI 81
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRSSF 339
ALDG ++ GRA++VN + ++ + F
Sbjct: 82 NALDGSDMGGRALKVNFPQSQKDKPRF 108
>gi|125541605|gb|EAY88000.1| hypothetical protein OsI_09422 [Oryza sativa Indica Group]
Length = 318
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 117/175 (66%), Gaps = 5/175 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+ GNLPY+ DS +LA + + T E+ EV+Y+R T RSRGF FVTMST+E+ E+ ++
Sbjct: 148 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 207
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
GR + VN A +P+ + P E +++VGNL W V + L ++F + G
Sbjct: 208 LDGSLYSGRTMRVNFA----DKPKPKLPLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGN 263
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
VV ARV+YD ETGRSRG+GFV S++ E+++A+++L+G L+GR IRVN+A ++
Sbjct: 264 VVGARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNLALGKK 318
>gi|226497258|ref|NP_001140274.1| uncharacterized protein LOC100272318 [Zea mays]
gi|194698792|gb|ACF83480.1| unknown [Zea mays]
gi|414883568|tpg|DAA59582.1| TPA: ribonucleoprotein [Zea mays]
Length = 341
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 116/177 (65%), Gaps = 5/177 (2%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+LFVGNLPY SE+LA +F +AG V+ A++IY++ T+RSRGF FVTM+T EEA KA++
Sbjct: 112 GRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQ 171
Query: 220 MFHRYDIDGRLLTVNKA-APRG----TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
MF + GR VN PRG T R + ++IY GNL W V L VF
Sbjct: 172 MFDGALLGGRTARVNYPEVPRGGERRTVTMSGRRRDDGTYKIYAGNLGWGVRADTLRNVF 231
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+++ARV+++RETGRSRGFGFV+ S+ + A+ +LDG L+GR++R+++AE
Sbjct: 232 EGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRSLRLSLAE 288
>gi|224091455|ref|XP_002309257.1| predicted protein [Populus trichocarpa]
gi|222855233|gb|EEE92780.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 130/200 (65%), Gaps = 14/200 (7%)
Query: 147 VFEEE---EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGF 203
+ EEE E ++ E+ KL+VGNLPY + S +L +FE+AG V AEVIY+R TDRSRGF
Sbjct: 97 IVEEEGDVEAIKATEEGKLYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSRGF 156
Query: 204 GFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPE-RAPRVFEPGF------- 254
GFVTM +VEEA+KA++MF+ GR + VN PRG + E PR+ + G+
Sbjct: 157 GFVTMGSVEEAKKAIQMFNGTQFGGRSVRVNFPEVPRGGEREVMGPRI-QSGYKGFIDSE 215
Query: 255 -RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+IY GNL W + + L F+ V++A+V+Y+R++ RSRGFGFV+ S A+
Sbjct: 216 HKIYAGNLGWRLTSEGLRDAFANQPGVLSAKVIYERDSRRSRGFGFVSFESAENAEAALE 275
Query: 314 ALDGQNLDGRAIRVNVAEDR 333
A++G+ ++GR +R+N+A +R
Sbjct: 276 AMNGEEVEGRPMRLNLAGER 295
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K++ GNL + + SE L F V A+VIY R++ RSRGFGFV+ + E AE A+E
Sbjct: 217 KIYAGNLGWRLTSEGLRDAFANQPGVLSAKVIYERDSRRSRGFGFVSFESAENAEAALEA 276
Query: 221 FHRYDIDGRLLTVNKAAPRGTQP 243
+ +++GR + +N A R P
Sbjct: 277 MNGEEVEGRPMRLNLAGERSPPP 299
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 115/177 (64%), Gaps = 5/177 (2%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+LFVGNLPY SE+LA +F +AG V+ A++IY++ T+RSRGF FVTM+T EEA KA++
Sbjct: 112 GRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQ 171
Query: 220 MFHRYDIDGRLLTVNKA-APRG----TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
MF + GR VN PRG T R + ++IY GNL W V L VF
Sbjct: 172 MFDGALLGGRTARVNYPEVPRGGERRTVTMSGRRRDDGTYKIYAGNLGWGVRADTLRNVF 231
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+++ARV+++RETGRSRGFGFV+ S+ + A+ +LDG L+GR +R+++AE
Sbjct: 232 EGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRPLRLSLAE 288
>gi|148907319|gb|ABR16796.1| unknown [Picea sitchensis]
Length = 387
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 124/215 (57%), Gaps = 13/215 (6%)
Query: 117 EGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKL 176
E +++ PE E+T ERQ ++ EEE PP KL+VGNLP D +L
Sbjct: 63 ETQITEQSVPEEEET---NKERQPKN-------EEEL--PPRRTKLYVGNLPRSCDIAQL 110
Query: 177 AMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-K 235
LF++ GTVE EV+ N ET SRGF FVTMSTV+EA+ A+E D+ GR + VN
Sbjct: 111 TQLFQEFGTVESVEVVRNEETGISRGFAFVTMSTVKEAKSAIEKLQGSDLGGRDMIVNFP 170
Query: 236 AAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 295
A + E E ++++VGNL W V L+ +FS+HG V A+V+Y + G R
Sbjct: 171 AKVLSKKKETDDSYIETPYQLFVGNLAWSVKKEILKSLFSQHGNVSAAKVIYSGKGGVPR 230
Query: 296 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
FGFV +SS++E+ DAI +L G+ GR ++V A
Sbjct: 231 AFGFVCLSSQSEMEDAIVSLHGKEFHGRNLKVRQA 265
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 104/204 (50%), Gaps = 24/204 (11%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
++ ++E P +LFVGNL + V E L LF + G V A+VIY+ + R FGFV +S
Sbjct: 181 DDSYIETP--YQLFVGNLAWSVKKEILKSLFSQHGNVSAAKVIYSGKGGVPRAFGFVCLS 238
Query: 210 TVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG---------------------TQPERAPR 248
+ E E A+ H + GR L V +A P + E
Sbjct: 239 SQSEMEDAIVSLHGKEFHGRNLKVRQARPTSKDMVVSDVEENIAKPSTMVEDSMTETVKA 298
Query: 249 VFE-PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 307
F + +YV NL V N L ++FS+HG V++ARV+Y R+ GRSR +GFV SS+ E
Sbjct: 299 TFVGSAYGVYVSNLSLSVKNKALSELFSQHGNVLDARVLYARKAGRSRPYGFVNFSSQAE 358
Query: 308 LNDAIAALDGQNLDGRAIRVNVAE 331
+ AIAALD + R + V A+
Sbjct: 359 VEAAIAALDKKEFYERKLVVKEAK 382
>gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
gi|241924857|gb|EER98001.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
Length = 338
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 116/176 (65%), Gaps = 5/176 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+LFVGNLPY SE+LA +F +AG V+ A++IY++ T+RSRGF FVTM+T EEA KA++M
Sbjct: 111 RLFVGNLPYTYTSEELAQVFAEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQM 170
Query: 221 FHRYDIDGRLLTVNKA-APRGTQPE---RAPRVFEPG-FRIYVGNLPWEVDNARLEQVFS 275
F + GR VN PRG + A R + G ++IY GNL W V L VF
Sbjct: 171 FDGALLGGRTARVNYPEVPRGGERRTVTMAGRRRDDGTYKIYAGNLGWGVRADTLRNVFE 230
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+++ARV+++RETGRSRGFGFV+ + + A+ ALDG L+GR +R+++AE
Sbjct: 231 GRAGLLDARVIFERETGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSLAE 286
>gi|168054234|ref|XP_001779537.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669018|gb|EDQ55613.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 194
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 119/193 (61%), Gaps = 20/193 (10%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+VGNLP+ DS +LA + +VE +V+Y++++ RSRGF FVTMST E A+ ++
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60
Query: 221 FHRYDIDGRLLTVNKAAPR---------------GTQPERAPR-----VFEPGFRIYVGN 260
D GR L V+ PR + +R PR V + ++++GN
Sbjct: 61 LDGSDFGGRPLKVSFPQPRENRDNKPRFGNNERGDRRSDRPPRQGSDRVLDNTNKMFIGN 120
Query: 261 LPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL 320
L W D L QVFSE+G VV+A+VVYDR+TG+SRGFGFVTMS+ +E+++A+ LDG
Sbjct: 121 LSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRGFGFVTMSAASEVSNAVQNLDGAEF 180
Query: 321 DGRAIRVNVAEDR 333
+GR +RV+ A +R
Sbjct: 181 EGREMRVSEAGER 193
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGNLPW D+A+L ++ + V VVYD+++GRSRGF FVTMS+ I
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60
Query: 315 LDGQNLDGRAIRVNVAEDRQRR 336
LDG + GR ++V+ + R+ R
Sbjct: 61 LDGSDFGGRPLKVSFPQPRENR 82
>gi|388493590|gb|AFK34861.1| unknown [Medicago truncatula]
Length = 285
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 115/187 (61%), Gaps = 9/187 (4%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
E E KL+ GNLPY VDS LA L E+ G+ E+ EV+Y+R+T +SRGF FVTMS
Sbjct: 104 ETVAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSC 163
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDN 267
VE+ ++ + GR L VN K P+ P E ++++VGNL W V
Sbjct: 164 VEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPK------EPLYPETEYKLFVGNLAWTVTF 217
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
Q F EHG VV ARV++D ETG+ RG+GFV+ ++++E++ A+A +D L+GR +RV
Sbjct: 218 ESFTQAFQEHGTVVGARVLFDGETGKFRGYGFVSYATKSEMDTALAIMDNVELEGRTLRV 277
Query: 328 NVAEDRQ 334
++A+ ++
Sbjct: 278 SLAQGKR 284
>gi|148908208|gb|ABR17219.1| unknown [Picea sitchensis]
Length = 296
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 110/181 (60%), Gaps = 5/181 (2%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
E E P KL+VGNLP DS +L LF++ GTVE AEV+ N ET SRGF FVTMS
Sbjct: 92 ENEEKSPSNRTKLYVGNLPRSCDSAQLTHLFQEFGTVESAEVVRNEETGLSRGFAFVTMS 151
Query: 210 TVEEAEKAVEMFHRYDIDGRLLTVNKAAP---RGTQPERAPRVFEPGFRIYVGNLPWEVD 266
TV EA+ A+E D+ GR + VN A RG + E E ++++ GNL W V
Sbjct: 152 TVIEAKAAIEKLQGSDLGGRDMIVNFPAAVLSRGNKTE--DEYVETPYQLFAGNLAWSVK 209
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
N L +FSEHG V+ A+VVY+ + G R FGFV +SS++E+ AI +L+G+ GR +
Sbjct: 210 NEILRDLFSEHGTVLGAKVVYNSKGGVPRAFGFVCLSSQSEMEAAIVSLNGKEFHGRNLV 269
Query: 327 V 327
V
Sbjct: 270 V 270
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 48/74 (64%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGNLP D+A+L +F E G V +A VV + ETG SRGF FVTMS+ E AI
Sbjct: 103 KLYVGNLPRSCDSAQLTHLFQEFGTVESAEVVRNEETGLSRGFAFVTMSTVIEAKAAIEK 162
Query: 315 LDGQNLDGRAIRVN 328
L G +L GR + VN
Sbjct: 163 LQGSDLGGRDMIVN 176
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
E+E+VE P +LF GNL + V +E L LF + GTV A+V+YN + R FGFV +S
Sbjct: 189 EDEYVETP--YQLFAGNLAWSVKNEILRDLFSEHGTVLGAKVVYNSKGGVPRAFGFVCLS 246
Query: 210 TVEEAEKAVEMFHRYDIDGRLLTVNKAAP 238
+ E E A+ + + GR L V + P
Sbjct: 247 SQSEMEAAIVSLNGKEFHGRNLVVRQVRP 275
>gi|357137588|ref|XP_003570382.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 305
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 108/171 (63%), Gaps = 5/171 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+ GNLPY+ DS LA + + T E+ EV+Y+R T RSRGF FVTMST+E+ E+ ++
Sbjct: 134 KLYFGNLPYNCDSALLAGIVQDHATPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 193
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
GR + VN A +P+ + P E +++VGNL W V L F + G
Sbjct: 194 LDGTLYSGRTMRVNMA----DKPKPKEPLYPETEHKLFVGNLSWTVTPEMLTDAFQQCGD 249
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
VV ARV+YD ETGRSRG+GFV S++ E++ AI L+G ++GR IRVN+A
Sbjct: 250 VVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIETLNGTEIEGREIRVNLA 300
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++Y GNLP+ D+A L + +H V+YDR TGRSRGF FVTMS+ + I
Sbjct: 134 KLYFGNLPYNCDSALLAGIVQDHATPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 193
Query: 315 LDGQNLDGRAIRVNVAE 331
LDG GR +RVN+A+
Sbjct: 194 LDGTLYSGRTMRVNMAD 210
>gi|242063480|ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 113/171 (66%), Gaps = 5/171 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+ GNLPY+ DS +LA + ++ + E+ EV+Y+R T RSRGF FVTM+TV++ E ++
Sbjct: 125 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRITGRSRGFAFVTMTTVQDCELVIKN 184
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
GR + VN A +P+ + P E +++VGNL W V + L + F G
Sbjct: 185 LDGSLYGGRTMKVNFA----DRPKPKLPLYPETEHKLFVGNLSWTVTSEMLTEAFGRCGN 240
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
VV ARV+YD ETGRSRG+GFV S++ E+++AI++L+G L+GR IRVN+A
Sbjct: 241 VVGARVLYDGETGRSRGYGFVCYSTKEEMDEAISSLNGTELEGREIRVNLA 291
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++Y GNLP+ D+A+L + E+ V+YDR TGRSRGF FVTM++ + I
Sbjct: 125 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRITGRSRGFAFVTMTTVQDCELVIKN 184
Query: 315 LDGQNLDGRAIRVNVAE 331
LDG GR ++VN A+
Sbjct: 185 LDGSLYGGRTMKVNFAD 201
>gi|326523287|dbj|BAJ88684.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 107/171 (62%), Gaps = 5/171 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+ GNLPY+ DS LA + + E+ EV+Y+R T RSRGF FVTMST+E+ E+ ++
Sbjct: 251 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 310
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
GR + VN A +P+ +AP E +++VGNL W V L F G
Sbjct: 311 LDGTLYSGRTMRVNMA----DRPKPKAPLYPETEHKLFVGNLSWTVTPEMLTDAFQRCGN 366
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
VV ARV+YD ETGRSRG+GFV S++ E++ AI L+G ++GR IRVN+A
Sbjct: 367 VVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIETLNGTEIEGREIRVNLA 417
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++Y GNLP+ D+A L + +H V+YDR TGRSRGF FVTMS+ + I
Sbjct: 251 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 310
Query: 315 LDGQNLDGRAIRVNVAE 331
LDG GR +RVN+A+
Sbjct: 311 LDGTLYSGRTMRVNMAD 327
>gi|359806610|ref|NP_001241528.1| uncharacterized protein LOC100820203 [Glycine max]
gi|255645445|gb|ACU23218.1| unknown [Glycine max]
gi|255645775|gb|ACU23380.1| unknown [Glycine max]
Length = 289
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 117/175 (66%), Gaps = 5/175 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+ GNLPY VDS KLA L + G+ E+ EV+Y+R+T +SRGF FVTMS +E+ +E
Sbjct: 118 KLYFGNLPYSVDSAKLAGLIQDFGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 177
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
+ GR L VN + ++P+ + P E +++VGNL W V N L Q F E+G
Sbjct: 178 LDGKEFLGRTLRVNFS----SKPKPKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGT 233
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
VV ARV+YD ETGRSRG+GFV S++ E+ A+AAL+ L+GRA+RV++A+ ++
Sbjct: 234 VVGARVLYDGETGRSRGYGFVCYSTKAEMEAALAALNDVELEGRAMRVSLAQGKR 288
>gi|357111564|ref|XP_003557582.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 354
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 118/183 (64%), Gaps = 10/183 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E +++VGNLPY + +L +F +AG+V+ ++IY++ TDRSRGF FVTM+T EEA KA
Sbjct: 119 EPGRIYVGNLPYTFTAAELTSVFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKA 178
Query: 218 VEMFHRYDIDGRLLTVN-KAAPRGTQ--------PERAPRVFEPG-FRIYVGNLPWEVDN 267
V+MF+ + GR + VN PRG + + + RV + G +++Y GNL W V
Sbjct: 179 VQMFNGALLGGRTIRVNFPEVPRGGERAVASAAAAKTSLRVVDDGTYKVYAGNLGWGVRA 238
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L+ F ++ +RV+++R+TGRSRGFGFV+ + + N AI A+DG LDGR +R+
Sbjct: 239 DALKTAFEGQPGLLGSRVIFERDTGRSRGFGFVSFQTLEDANAAIQAMDGVELDGRPLRL 298
Query: 328 NVA 330
++A
Sbjct: 299 SLA 301
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 239 RGTQPERAPRVF--EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 296
RG P R EPG RIYVGNLP+ A L VFSE G V + +++YD+ T RSRG
Sbjct: 105 RGYYPPRTRPALGQEPG-RIYVGNLPYTFTAAELTSVFSEAGSVDDVQIIYDKITDRSRG 163
Query: 297 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F FVTM++ E A+ +G L GR IRVN E
Sbjct: 164 FAFVTMATAEEAAKAVQMFNGALLGGRTIRVNFPE 198
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K++ GNL + V ++ L FE + + VI+ R+T RSRGFGFV+ T+E+A A++
Sbjct: 226 KVYAGNLGWGVRADALKTAFEGQPGLLGSRVIFERDTGRSRGFGFVSFQTLEDANAAIQA 285
Query: 221 FHRYDIDGRLLTVNKAA---PRGTQP 243
++DGR L ++ A+ P G+ P
Sbjct: 286 MDGVELDGRPLRLSLASQNPPAGSTP 311
>gi|326487400|dbj|BAJ89684.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511469|dbj|BAJ87748.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511763|dbj|BAJ92026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514088|dbj|BAJ92194.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527877|dbj|BAJ88990.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534068|dbj|BAJ89384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 107/171 (62%), Gaps = 5/171 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+ GNLPY+ DS LA + + E+ EV+Y+R T RSRGF FVTMST+E+ E+ ++
Sbjct: 135 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 194
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
GR + VN A +P+ +AP E +++VGNL W V L F G
Sbjct: 195 LDGTLYSGRTMRVNMA----DRPKPKAPLYPETEHKLFVGNLSWTVTPEMLTDAFQRCGN 250
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
VV ARV+YD ETGRSRG+GFV S++ E++ AI L+G ++GR IRVN+A
Sbjct: 251 VVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIETLNGTEIEGREIRVNLA 301
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++Y GNLP+ D+A L + +H V+YDR TGRSRGF FVTMS+ + I
Sbjct: 135 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 194
Query: 315 LDGQNLDGRAIRVNVAE 331
LDG GR +RVN+A+
Sbjct: 195 LDGTLYSGRTMRVNMAD 211
>gi|133249|sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|100390|pir||S12111 ribonucleoprotein, 33K, precursor - common tobacco
gi|20005|emb|CAA37879.1| unnamed protein product [Nicotiana tabacum]
Length = 324
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 117/188 (62%), Gaps = 9/188 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+L+VGNLP+ + S +L+ +F +AGTV E++Y+R TDRSRGF FVTM +VEEA++A+
Sbjct: 114 GRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIR 173
Query: 220 MFHRYDIDGRLLTVN-KAAPRGTQPERAP---RVFEPGF-----RIYVGNLPWEVDNARL 270
+F + GR + VN PRG + E R GF ++YV NL W + + L
Sbjct: 174 LFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGL 233
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
F++ ++A+V+YDR +GRSRGFGF+T SS +N A+ ++ L+GR +R+NVA
Sbjct: 234 RDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVA 293
Query: 331 EDRQRRSS 338
+ SS
Sbjct: 294 GQKAPVSS 301
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G R+YVGNLP+ + +++L ++F+E G V N +VYDR T RSRGF FVTM S E +AI
Sbjct: 113 GGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAI 172
Query: 313 AALDGQNLDGRAIRVNVAE 331
DG + GR ++VN E
Sbjct: 173 RLFDGSQVGGRTVKVNFPE 191
>gi|311952|emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 116/187 (62%), Gaps = 9/187 (4%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+L+VGNLP+ + S +L+ +F +AGTV E++Y+R TDRSRGF FVTM +VEEA++A+ +
Sbjct: 110 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 169
Query: 221 FHRYDIDGRLLTVN-KAAPRGTQPERAP---RVFEPGF-----RIYVGNLPWEVDNARLE 271
F + GR + VN PRG + E R GF ++YV NL W + + L
Sbjct: 170 FDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLR 229
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F++ ++A+V+YDR +GRSRGFGF+T SS + A+ ++ L+GR +R+NVA
Sbjct: 230 DAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMKSALDTMNEVELEGRPLRLNVAG 289
Query: 332 DRQRRSS 338
+ SS
Sbjct: 290 QKAPLSS 296
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G R+YVGNLP+ + +++L ++F+E G V N +VYDR T RSRGF FVTM S E +AI
Sbjct: 108 GGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAI 167
Query: 313 AALDGQNLDGRAIRVNVAE 331
DG + GR ++VN E
Sbjct: 168 RLFDGSQVGGRTVKVNFPE 186
>gi|225463276|ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 311
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 120/187 (64%), Gaps = 13/187 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++L+VGNLPY + S +L +F +AG+V E++Y+R TDRSRGF FVTM +V+EA++A
Sbjct: 101 EASRLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEA 160
Query: 218 VEMFHRYDIDGRLLTVN-KAAPRGTQPERA---PRV-------FEPGFRIYVGNLPWEVD 266
+ MF + GR + VN PRG ERA P++ + ++IY GNL W +
Sbjct: 161 IRMFDGSQVGGRTVKVNFPEVPRGG--ERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLT 218
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
+ L F++H ++ A+V+Y+RE+GRSRGFGF++ +S A+ A++ ++GR +R
Sbjct: 219 SEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMNEVEVEGRPLR 278
Query: 327 VNVAEDR 333
+N+A R
Sbjct: 279 LNLAAVR 285
>gi|413939453|gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 112/171 (65%), Gaps = 5/171 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+ GNLPY+ DS +LA + ++ + E+ EV+Y+R T RSRGF FVTM+TV++ E ++
Sbjct: 117 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIKN 176
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVF-EPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
GR + VN A +P+ ++ E +++VGNL W V + L + F G
Sbjct: 177 LDGSLYGGRTMKVNFA----DRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGT 232
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
VV ARV+YD ETGRSRG+GFV S+ E+++A+++L+G ++GR +RVN+A
Sbjct: 233 VVGARVLYDGETGRSRGYGFVCYSTREEMDEALSSLNGMEMEGREMRVNLA 283
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++Y GNLP+ D+A+L + E+ V+YDR TGRSRGF FVTM++ + I
Sbjct: 117 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIKN 176
Query: 315 LDGQNLDGRAIRVNVAE 331
LDG GR ++VN A+
Sbjct: 177 LDGSLYGGRTMKVNFAD 193
>gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 115/183 (62%), Gaps = 10/183 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E +++VGNLPY + +L F +AG+V+ ++IY++ TDRSRGF FVTM+T EEA KA
Sbjct: 106 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKA 165
Query: 218 VEMFHRYDIDGRLLTVN-KAAPRGTQPERAP--------RVFEPG-FRIYVGNLPWEVDN 267
V+MF+ + GR + VN PRG + A RV + G +++Y GNL W V
Sbjct: 166 VQMFNGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVDDGTYKVYAGNLGWGVRA 225
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L+ F +V ARV+++R+TGRSRGFGFV+ + + A+ A+DG LDGR +R+
Sbjct: 226 DALKTAFEGQPGLVGARVIFERDTGRSRGFGFVSFHTIQDAKAALQAMDGVELDGRPLRL 285
Query: 328 NVA 330
++A
Sbjct: 286 SLA 288
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
EPG RIYVGNLP+ A L FSE G V + +++YD+ T RSRGF FVTM++ E
Sbjct: 106 EPG-RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAK 164
Query: 311 AIAALDGQNLDGRAIRVNVAE 331
A+ +G L GR +RVN E
Sbjct: 165 AVQMFNGALLGGRTVRVNFPE 185
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K++ GNL + V ++ L FE + A VI+ R+T RSRGFGFV+ T+++A+ A++
Sbjct: 213 KVYAGNLGWGVRADALKTAFEGQPGLVGARVIFERDTGRSRGFGFVSFHTIQDAKAALQA 272
Query: 221 FHRYDIDGRLLTVNKAA---PRGTQPERA 246
++DGR L ++ AA P G+ P A
Sbjct: 273 MDGVELDGRPLRLSLAAQNPPAGSTPSTA 301
>gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 115/183 (62%), Gaps = 10/183 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E +++VGNLPY + +L F +AG+V+ ++IY++ TDRSRGF FVTM+T EEA KA
Sbjct: 106 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKA 165
Query: 218 VEMFHRYDIDGRLLTVN-KAAPRGTQPERAP--------RVFEPG-FRIYVGNLPWEVDN 267
V+MF+ + GR + VN PRG + A RV + G +++Y GNL W V
Sbjct: 166 VQMFNGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVDDGTYKVYAGNLGWGVRA 225
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L+ F +V ARV+++R+TGRSRGFGFV+ + + A+ A+DG LDGR +R+
Sbjct: 226 DALKTAFEGQPGLVGARVIFERDTGRSRGFGFVSFHTIQDAKAALQAMDGVELDGRPLRL 285
Query: 328 NVA 330
++A
Sbjct: 286 SLA 288
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
EPG RIYVGNLP+ A L FSE G V + +++YD+ T RSRGF FVTM++ E
Sbjct: 106 EPG-RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAK 164
Query: 311 AIAALDGQNLDGRAIRVNVAE 331
A+ +G L GR +RVN E
Sbjct: 165 AVQMFNGALLGGRTVRVNFPE 185
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K++ GNL + V ++ L FE + A VI+ R+T RSRGFGFV+ T+++A+ A++
Sbjct: 213 KVYAGNLGWGVRADALKTAFEGQPGLVGARVIFERDTGRSRGFGFVSFHTIQDAKAALQA 272
Query: 221 FHRYDIDGRLLTVNKAA---PRGTQPERA 246
++DGR L ++ AA P G+ P A
Sbjct: 273 MDGVELDGRPLRLSLAAQNPPAGSTPSTA 301
>gi|219363077|ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
gi|194698058|gb|ACF83113.1| unknown [Zea mays]
Length = 287
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 112/171 (65%), Gaps = 5/171 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+ GNLPY+ DS +LA + ++ + E+ EV+Y+R T RSRGF FVTM+TV++ E ++
Sbjct: 117 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIKN 176
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVF-EPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
GR + VN A +P+ ++ E +++VGNL W V + L + F G
Sbjct: 177 LDGSLYGGRTMKVNFA----DRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGT 232
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
VV ARV+YD ETGRSRG+GFV S+ E+++A+++L+G ++GR +RVN+A
Sbjct: 233 VVGARVLYDGETGRSRGYGFVCYSTREEMDEALSSLNGMEMEGREMRVNLA 283
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++Y GNLP+ D+A+L + E+ V+YDR TGRSRGF FVTM++ + I
Sbjct: 117 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIKN 176
Query: 315 LDGQNLDGRAIRVNVAE 331
LDG GR ++VN A+
Sbjct: 177 LDGSLYGGRTMKVNFAD 193
>gi|449437482|ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449528229|ref|XP_004171108.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 115/182 (63%), Gaps = 9/182 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KL++GNLPY + S +L+ +F +AG V +VIY++ TDRSRGF FVTM+T+EEA++A
Sbjct: 113 EAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEA 172
Query: 218 VEMFHRYDIDGRLLTVN-KAAPRGTQPE-RAPRV-------FEPGFRIYVGNLPWEVDNA 268
+ MF I GR + VN PRG + E PR+ + +IY GNL W + +
Sbjct: 173 IRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNKFVDSPHKIYAGNLGWGLTSQ 232
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
L F +++A+++YDR +G+SRGFGFV+ + + A+ +++G ++GR +R+N
Sbjct: 233 SLRDAFENQPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLN 292
Query: 329 VA 330
+A
Sbjct: 293 IA 294
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 55/77 (71%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++Y+GNLP+ + +++L +VF+E G VV+ +V+YD+ T RSRGF FVTM++ E +AI
Sbjct: 116 KLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 175
Query: 315 LDGQNLDGRAIRVNVAE 331
DG + GR +RVN E
Sbjct: 176 FDGSQIGGRTVRVNFPE 192
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTV 211
+FV+ P K++ GNL + + S+ L FE + A++IY+R + +SRGFGFV+ T
Sbjct: 212 KFVDSPH--KIYAGNLGWGLTSQSLRDAFENQPGILSAKIIYDRASGKSRGFGFVSFETA 269
Query: 212 EEAEKAVEMFHRYDIDGRLLTVNKAAPRG-TQPERAPR 248
E+AE A+E + +++GR L +N AA + P PR
Sbjct: 270 EDAESALESMNGVEVEGRPLRLNIAAGQSPISPAAFPR 307
>gi|356505441|ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 314
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 115/183 (62%), Gaps = 9/183 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+L+VGNLPY + + LA LF +AGTV E++Y+R TDRSRGF FVTM VE+A++A+
Sbjct: 105 GRLYVGNLPYSITNSALAELFGEAGTVASVEIMYDRVTDRSRGFAFVTMGNVEDAKEAIR 164
Query: 220 MFHRYDIDGRLLTVN-----KAAPR---GTQPERAPRVF-EPGFRIYVGNLPWEVDNARL 270
MF + GR + VN K R G++ + R F + +IY GNL W + + L
Sbjct: 165 MFDGSQVGGRTVKVNFPEVPKGGERLVMGSKIRNSYRGFVDSPHKIYAGNLGWGLTSQGL 224
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ F+E V++A+V+Y+R++GRSRGFGFV+ + A+ ++G + GR +R+N+A
Sbjct: 225 REAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAESAQAALDIMNGVEVQGRPLRLNLA 284
Query: 331 EDR 333
E R
Sbjct: 285 EAR 287
>gi|356572637|ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 317
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 116/183 (63%), Gaps = 9/183 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+L+VGNLPY + + +L LF +AGTV E++Y+R TDRSRGF FVTM +VE+A++A+
Sbjct: 108 GRLYVGNLPYSITNSELGELFGEAGTVASVEIVYDRVTDRSRGFAFVTMGSVEDAKEAIR 167
Query: 220 MFHRYDIDGRLLTVN-----KAAPR---GTQPERAPRVF-EPGFRIYVGNLPWEVDNARL 270
MF + GR + VN K R G++ + R F + +IY GNL W + + L
Sbjct: 168 MFDGSQVGGRTVKVNFPEVPKGGERLVMGSKILNSYRGFVDSPHKIYAGNLGWGLTSQGL 227
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ F+E V++A+V+Y+R++GRSRGFGFV+ + A+ ++G + GR +R+N+A
Sbjct: 228 REAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAESARAALDIMNGVEVQGRPLRLNLA 287
Query: 331 EDR 333
E R
Sbjct: 288 EAR 290
>gi|359481379|ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 2 [Vitis
vinifera]
Length = 254
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 107/178 (60%), Gaps = 14/178 (7%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D KLFVGNLP++VDS LA LFE+AG VE+ E + R+ + G A +
Sbjct: 89 DLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEELEGRQLRVNSG--------PPPARREN 140
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
F + + R N PRG + RIYVGNL W VD+ LE +FSE G
Sbjct: 141 SNFRGENSNFRGENTNFRGPRGGANLNSTN------RIYVGNLSWGVDDLALETLFSEQG 194
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
KV ARV+YDRETGRSRGFGFVT +S E+N AI +LDG +L+GR+IRV +AE R RR
Sbjct: 195 KVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRR 252
>gi|147769830|emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
Length = 454
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 119/187 (63%), Gaps = 13/187 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++L+VGNLPY + S +L +F +AG+V E++Y+R TDRSRGF FVTM +V+EA++A
Sbjct: 244 EASRLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEA 303
Query: 218 VEMFHRYDIDGRLLTVN-KAAPRGTQPERA---PRV-------FEPGFRIYVGNLPWEVD 266
+ MF + GR + VN PRG ERA P++ + ++IY GNL W +
Sbjct: 304 IRMFDGSQVGGRTVKVNFPEVPRGG--ERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLT 361
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
+ L F++ ++ A+V+Y+RE+GRSRGFGF++ +S A+ A+B ++GR +R
Sbjct: 362 SEGLRDAFADXPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMBEVEVEGRPLR 421
Query: 327 VNVAEDR 333
+N+A R
Sbjct: 422 LNLAAVR 428
>gi|356537206|ref|XP_003537120.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 298
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 117/189 (61%), Gaps = 13/189 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ ++LFVGNLPY + S +LA F +AG V E++Y+ DRSRGF FVTM ++E+AE+A
Sbjct: 86 QSSRLFVGNLPYSLLSSQLAQRFGEAGNVVSVEIVYDDIMDRSRGFAFVTMGSMEDAERA 145
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----GF-----RIYVGNLPWEVDNA 268
+ MF +I GR++ VN A P+R R+ GF +IY GNL W + +
Sbjct: 146 IRMFDGSEIGGRIMKVNFTA----IPKRGKRLVMGSNYRGFVDSPHKIYAGNLGWGLTSQ 201
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
L F+E ++A+V+Y+R +GRSRG+GFV+ + ++ A+ +++G + GR +R+N
Sbjct: 202 DLRDAFAEQPGFLSAKVIYERNSGRSRGYGFVSFETAEDVEAALNSMNGVEVQGRPLRLN 261
Query: 329 VAEDRQRRS 337
+A D+ S
Sbjct: 262 LATDKNTSS 270
>gi|412986787|emb|CCO15213.1| predicted protein [Bathycoccus prasinos]
Length = 260
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 111/174 (63%), Gaps = 5/174 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL++GNL +D+D + L LF + + ++ +R T RSRGFGF T+ + E A+ A+
Sbjct: 75 KLYIGNLSWDMDDQALNDLFSQYQASDCV-IVTDRNTGRSRGFGFATVPSQEMADSAIAA 133
Query: 221 FHRYDIDGRLLTVNKAAP---RGTQPERAPRVFEP-GFRIYVGNLPWEVDNARLEQVFSE 276
+ D GR + V + P R + +R R ++ G ++Y GNL W +D+ L+ + +E
Sbjct: 134 LNDSDQFGRQMRVVISLPPEERPAREQRPKRNWDADGRKVYFGNLSWGMDHLDLQDLCAE 193
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
G V +R++ DRETGRSRGFGFVTMSSE E D +A L+GQ++DGR +RVN+A
Sbjct: 194 FGNVDESRLITDRETGRSRGFGFVTMSSEKEAEDVVAQLNGQDVDGRVLRVNIA 247
>gi|303286031|ref|XP_003062305.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455822|gb|EEH53124.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 227
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 111/180 (61%), Gaps = 11/180 (6%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+VGNL + VD L +F + IA VI + T RSRGFGFV + + E AEKA+
Sbjct: 44 KLYVGNLSWGVDDSMLTDVFAEYDASGIA-VISDMNTGRSRGFGFVEVPSQEIAEKAIAE 102
Query: 221 FHRYDIDGRLLTVNKAAPR-------GTQPERAPRVFEPGF---RIYVGNLPWEVDNARL 270
D+DGR + VN + R G + ERAPR F ++Y GNL W +D+ L
Sbjct: 103 LDGADVDGRPIRVNISEARSSRREYDGERGERAPRERNYDFDARKVYFGNLSWGMDHLDL 162
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ + E+G+V ++R++ DRETGRSRGFGFVTMSS + + L+GQ++DGR +RVN+A
Sbjct: 163 QDLCGEYGEVADSRLITDRETGRSRGFGFVTMSSAEQAEKVVNGLNGQDVDGRVLRVNIA 222
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGNL W VD++ L VF+E+ V+ D TGRSRGFGFV + S+ AIA
Sbjct: 44 KLYVGNLSWGVDDSMLTDVFAEY-DASGIAVISDMNTGRSRGFGFVEVPSQEIAEKAIAE 102
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSSF 339
LDG ++DGR IRVN++E R R +
Sbjct: 103 LDGADVDGRPIRVNISEARSSRREY 127
>gi|308807591|ref|XP_003081106.1| Ps16 protein (ISS) [Ostreococcus tauri]
gi|116059568|emb|CAL55275.1| Ps16 protein (ISS) [Ostreococcus tauri]
Length = 1094
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 115/178 (64%), Gaps = 9/178 (5%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+++VGNL + V E LA LF + V A V+ +RET RSRGF FV+M+ E+ E+A
Sbjct: 915 RVYVGNLSWGVTDESLAELFSEF-DVRDASVMKDRETGRSRGFAFVSMNNEEDVERASAA 973
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--------GFRIYVGNLPWEVDNARLEQ 272
+ ++DGR L V+KA + + ER R+ G R+Y GNL W +D L+
Sbjct: 974 LNGREVDGRELRVSKAQAQAERGERPMRMPRQRRDFDQAEGRRVYFGNLSWGMDQYDLQD 1033
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ SE G V ++R++ DR+TGRSRGFGFVTMS+ TE ++ +A L+GQ++DGR +RVN+A
Sbjct: 1034 LCSEFGSVEDSRLITDRDTGRSRGFGFVTMSNTTEADEVVAQLNGQDVDGRVLRVNIA 1091
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+YVGNL W V + L ++FSE V +A V+ DRETGRSRGF FV+M++E ++ A AA
Sbjct: 915 RVYVGNLSWGVTDESLAELFSEF-DVRDASVMKDRETGRSRGFAFVSMNNEEDVERASAA 973
Query: 315 LDGQNLDGRAIRVNVAEDRQRR 336
L+G+ +DGR +RV+ A+ + R
Sbjct: 974 LNGREVDGRELRVSKAQAQAER 995
>gi|297741610|emb|CBI32742.3| unnamed protein product [Vitis vinifera]
Length = 127
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 95/149 (63%), Gaps = 24/149 (16%)
Query: 188 IAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 247
+ EVIY++ T RSRGFGFVTMSTVEE E A + F+ Y+++GR L VN P
Sbjct: 1 MVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPP--------- 51
Query: 248 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 307
P +N LE +FSE GKV ARV+YDRETGRSRGFGFVT +S E
Sbjct: 52 --------------PARRENT-LETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEE 96
Query: 308 LNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+N AI +LDG +L+GR+IRV +AE R RR
Sbjct: 97 VNRAIESLDGVDLNGRSIRVTMAEARPRR 125
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 176 LAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK 235
L LF + G V A VIY+RET RSRGFGFVT ++ EE +A+E D++GR + V
Sbjct: 59 LETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTM 118
Query: 236 AAPR 239
A R
Sbjct: 119 AEAR 122
>gi|110739563|dbj|BAF01690.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
Length = 84
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 74/84 (88%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+YVGNLPW+VDN RLEQ+FSEHGKVV ARVVYDRETGRSRGFGFVTMS ELN+AI+AL
Sbjct: 1 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 60
Query: 316 DGQNLDGRAIRVNVAEDRQRRSSF 339
DGQNL+GRAIRVN AE+R R +
Sbjct: 61 DGQNLEGRAIRVNGAEERPPRRGY 84
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 6/87 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++VGNLP+DVD+ +L LF + G V A V+Y+RET RSRGFGFVTMS V+E +A+
Sbjct: 1 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 60
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPR 248
+++GR + VN A ER PR
Sbjct: 61 DGQNLEGRAIRVNGA------EERPPR 81
>gi|242048706|ref|XP_002462099.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
gi|241925476|gb|EER98620.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
Length = 242
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 115/194 (59%), Gaps = 8/194 (4%)
Query: 142 SGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSR 201
S V E E V KL+VGN+P V +++L +F GTVE AEV+Y++ T+RSR
Sbjct: 52 SASSAVLEAPEVVAA---RKLYVGNVPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSR 108
Query: 202 GFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA---APR--GTQPERAPRVFEPGFRI 256
FGFVTMSTVEEA AVE + ++ GR + VN P + PE P + +++
Sbjct: 109 RFGFVTMSTVEEANAAVEALNGTEVGGRKIKVNVTESFLPNIDRSAPESEPVFVDSQYKV 168
Query: 257 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
YVGNL V L+ FSE GK+++A V + T +S+G+GFVT SSE E+ A+A +
Sbjct: 169 YVGNLAKNVTTEVLKNFFSEKGKILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVATFN 228
Query: 317 GQNLDGRAIRVNVA 330
L+G+ IRVN A
Sbjct: 229 NAELEGQPIRVNRA 242
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGN+P V N L +F+ HG V A V+YD+ T RSR FGFVTMS+ E N A+ A
Sbjct: 68 KLYVGNVPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTVEEANAAVEA 127
Query: 315 LDGQNLDGRAIRVNVAED 332
L+G + GR I+VNV E
Sbjct: 128 LNGTEVGGRKIKVNVTES 145
>gi|357440093|ref|XP_003590324.1| 33 kDa ribonucleoprotein [Medicago truncatula]
gi|355479372|gb|AES60575.1| 33 kDa ribonucleoprotein [Medicago truncatula]
Length = 311
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 117/190 (61%), Gaps = 5/190 (2%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E + +LFVGNLP+ + S +LA LF +AG V E++Y+ T+RSRGF FVTM VE+A
Sbjct: 103 ESTQSRRLFVGNLPFSLSSSQLAQLFGEAGNVVSVEILYDDITNRSRGFAFVTMGNVEDA 162
Query: 215 EKAVEMFHRYDIDGRLLTVN----KAAPRGTQPERAPRVF-EPGFRIYVGNLPWEVDNAR 269
E+A+ MF + GR + VN + Q R + + +IY GNL W++ +
Sbjct: 163 EEAIRMFDGTTVGGRAIKVNFPEVPIVGKRVQMGSTYRGYVDSPHKIYAGNLGWDMTSQY 222
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L + F++ +++A+VVY+R G+SRG+GFV+ + ++ A++A++G + GR +R+ +
Sbjct: 223 LRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNGVEVQGRPLRLKL 282
Query: 330 AEDRQRRSSF 339
A D ++ SS
Sbjct: 283 AVDNRKPSSL 292
>gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113610463|dbj|BAF20841.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|125557292|gb|EAZ02828.1| hypothetical protein OsI_24955 [Oryza sativa Indica Group]
gi|215695203|dbj|BAG90394.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740788|dbj|BAG96944.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 348
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 113/182 (62%), Gaps = 8/182 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E +LFVGNLPY + S +++ F +AG V+ ++IY++ TDRSRGF FVTM+T EEA A
Sbjct: 116 EPGRLFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATA 175
Query: 218 VEMFHRYDIDGRLLTVNKA-APRGTQ-------PERAPRVFEPGFRIYVGNLPWEVDNAR 269
++MF+ + GR VN PRG + R R + F+IY GNL W V
Sbjct: 176 IQMFNGALLGGRTARVNYPEVPRGGERAVGSAAATRENRRDDGTFKIYAGNLGWGVRADA 235
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L F +++ARV+++R++GRSRGFGFV+ + + A+ ALDG L+GR +R+++
Sbjct: 236 LRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSM 295
Query: 330 AE 331
AE
Sbjct: 296 AE 297
>gi|118487510|gb|ABK95582.1| unknown [Populus trichocarpa]
Length = 198
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 112/176 (63%), Gaps = 17/176 (9%)
Query: 171 VDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL 230
+ S +LA +FE+AG V AEVI +R TDRSRGFGFVTM +VEEA++A+ MF+ + GR
Sbjct: 1 MTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEEAKEAIRMFNGSQVGGRT 60
Query: 231 LTVN-KAAPRGTQPERAPRVFEP-------GF-----RIYVGNLPWEVDNARLEQVFSEH 277
L VN PRG + E V EP GF +IY GNL W + + L F+
Sbjct: 61 LRVNFPEVPRGGERE----VMEPRIRSGYKGFIDSEHKIYAGNLGWRLTSEGLGDAFANQ 116
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+++A+V+Y+R+TGRSRGFGFV+ S A+ A++G+ +DGR +R+N+A +R
Sbjct: 117 PGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGEEVDGRPLRLNLAGER 172
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K++ GNL + + SE L F + A+VIY R+T RSRGFGFV+ + E AE A+E
Sbjct: 94 KIYAGNLGWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEA 153
Query: 221 FHRYDIDGRLLTVNKAAPRGTQP 243
+ ++DGR L +N A R P
Sbjct: 154 MNGEEVDGRPLRLNLAGERSYPP 176
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 113/185 (61%), Gaps = 8/185 (4%)
Query: 154 VEPPEDA---KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
+E PE+ KL+VGN+P V +++LA +F GTVE AEV++++ T RSR FGFVTMST
Sbjct: 61 LEAPEEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMST 120
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVNKA---APR--GTQPERAPRVFEPGFRIYVGNLPWEV 265
EEA A+E + ++ GR + VN P + PE P + +++YVGNL V
Sbjct: 121 PEEANAAIESLNETEVGGRKIKVNVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNLAKSV 180
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
L+ FSE G+V++A V T +S+G+GFVT SSE E+ A++ + L+G+ I
Sbjct: 181 TTEMLKNFFSEKGEVLSATVSRIPGTAKSKGYGFVTFSSEEEVQAAVSTFNNAELEGQPI 240
Query: 326 RVNVA 330
RVN A
Sbjct: 241 RVNKA 245
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGN+P V N L +F++HG V A V++D+ TGRSR FGFVTMS+ E N AI +
Sbjct: 71 KLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIES 130
Query: 315 LDGQNLDGRAIRVNVAED 332
L+ + GR I+VNV E
Sbjct: 131 LNETEVGGRKIKVNVTES 148
>gi|20009|emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
Length = 292
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 103/166 (62%), Gaps = 9/166 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+L+VGNLP+ + S +L+ +F +AGTV E++Y+R TDRSRGF FVTM +VEEA++A+
Sbjct: 103 GRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIR 162
Query: 220 MFHRYDIDGRLLTVN-KAAPRGTQPERAP---RVFEPGF-----RIYVGNLPWEVDNARL 270
+F + GR + VN PRG + E R GF ++YV NL W + + L
Sbjct: 163 LFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGL 222
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
F++ ++A+V+YDR +GRSRGFGF+T SS + A+ ++
Sbjct: 223 RDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMKSALDTMN 268
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G R+YVGNLP+ + +++L ++F+E G V N +VYDR T RSRGF FVTM S E +AI
Sbjct: 102 GGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAI 161
Query: 313 AALDGQNLDGRAIRVNVAE 331
DG + GR ++VN E
Sbjct: 162 RLFDGSQVGGRTVKVNFPE 180
>gi|75275079|sp|P82277.1|RRP2_SPIOL RecName: Full=30S ribosomal protein 2, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 2;
Short=PSRP-2; Flags: Precursor
gi|7578881|gb|AAF64167.1|AF240462_1 plastid-specific ribosomal protein 2 precursor [Spinacia oleracea]
Length = 260
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 110/177 (62%), Gaps = 8/177 (4%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+L+VGN+P ++++++L + E+ G +EIAEV+Y++ + RSR FGFVTM TVE+A +E
Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEK 144
Query: 221 FHRYDIDGRLLTVNKAAP-------RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ +I GR + VN TQ E + V P +++Y+GNL V N L+
Sbjct: 145 LNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFVESP-YKVYIGNLAKTVTNELLKDF 203
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
FSE GKV+ A+V T +S GFGFV+ SSE E+ AI AL+ L+G+ IRVN A
Sbjct: 204 FSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRVNKA 260
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+YVGN+P ++N L + EHG + A V+YD+ +GRSR FGFVTM + + N I
Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEK 144
Query: 315 LDGQNLDGRAIRVNVAE 331
L+ + GR I+VN+ E
Sbjct: 145 LNDTEIGGRKIKVNITE 161
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 113/192 (58%), Gaps = 8/192 (4%)
Query: 147 VFEEEEFVEPPEDA---KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGF 203
V +E PE+ KL+VGN+P V +++L+ +F GTV AEV+Y++ + RSR F
Sbjct: 53 VLASSAVMEAPEELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRF 112
Query: 204 GFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA---APR--GTQPERAPRVFEPGFRIYV 258
GFVTMST EE A+E + ++ GR + VN P + PE P + +++YV
Sbjct: 113 GFVTMSTAEEVAAAIESLNDTEVGGRKIKVNVTESFLPNIDASAPESEPSFVDSQYKVYV 172
Query: 259 GNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
GNL +V L+ FSE G+V++A V T +S+G+GFVT SSE E+ A++ +
Sbjct: 173 GNLAKKVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVEAAVSTFNNT 232
Query: 319 NLDGRAIRVNVA 330
L+G+ IRVN A
Sbjct: 233 ELEGQTIRVNRA 244
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGN+P V N L +F+ HG VV A V+YD+ +GRSR FGFVTMS+ E+ AI +
Sbjct: 70 KLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEEVAAAIES 129
Query: 315 LDGQNLDGRAIRVNVAED 332
L+ + GR I+VNV E
Sbjct: 130 LNDTEVGGRKIKVNVTES 147
>gi|116790996|gb|ABK25816.1| unknown [Picea sitchensis]
Length = 248
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 111/175 (63%), Gaps = 7/175 (4%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+L+VGN+P +E+LA +F + G VE AEV+Y++ T RSR F FVTMSTVE+A+ A+E
Sbjct: 74 RLYVGNIPRTSTNEELAKIFGECGNVEKAEVMYDKYTKRSRRFAFVTMSTVEDAQAAIEK 133
Query: 221 FHRYDIDGRLLTVN------KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
+ +I GR++ VN + E A + P +++YVGNL V L++ F
Sbjct: 134 MNGTEIGGRVIKVNITEKPLDVSGLNRLTEEAEFIDSP-YKVYVGNLAKAVTTETLKKKF 192
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
+E G V++A+V ETG+S G+GFV+ SSE ++ AI+A + L+G+ +RVNV
Sbjct: 193 AEKGNVLDAKVTRIPETGKSGGYGFVSFSSEADVEAAISAFNNVVLEGKPMRVNV 247
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+YVGN+P N L ++F E G V A V+YD+ T RSR F FVTMS+ + AI
Sbjct: 74 RLYVGNIPRTSTNEELAKIFGECGNVEKAEVMYDKYTKRSRRFAFVTMSTVEDAQAAIEK 133
Query: 315 LDGQNLDGRAIRVNVAE 331
++G + GR I+VN+ E
Sbjct: 134 MNGTEIGGRVIKVNITE 150
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 124/210 (59%), Gaps = 13/210 (6%)
Query: 137 ERQEESGEEGVFEEEEFVEPPED---AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIY 193
+R+ E +E + ++ + EP + LFVGN+ +++D + L FE G + VI
Sbjct: 191 KRKAEEVDEPIVKKSKVEEPAAEEGIKNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVIT 250
Query: 194 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-----RAPR 248
+RET R++GFG+V S +A KA + H Y++DGR L V+ + PR +P+ RA +
Sbjct: 251 DRETGRAKGFGYVEFSNAADAAKAQKEMHEYELDGRQLNVDFSTPR-AKPDANGGARANK 309
Query: 249 VFE----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 304
+ P +++GN+ +E N +++VF+E+G + + DR+TG +GFG+V SS
Sbjct: 310 YGDKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSS 369
Query: 305 ETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
+ E A+ AL+GQ++ GRAIR++ A R+
Sbjct: 370 QQEATAALEALNGQDIGGRAIRIDYATPRE 399
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VGN+ W +D L + F G++V RV+ DRETGR++GFG+V S+ + A +
Sbjct: 219 LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAADAAKAQKEM 278
Query: 316 DGQNLDGRAIRVNVAEDRQR 335
LDGR + V+ + R +
Sbjct: 279 HEYELDGRQLNVDFSTPRAK 298
>gi|388506424|gb|AFK41278.1| unknown [Lotus japonicus]
Length = 199
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 107/167 (64%), Gaps = 9/167 (5%)
Query: 173 SEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 232
S +L +F +AGTV EV+Y+R TDRSRGF FVTM +V++A++A+ MF + GR++
Sbjct: 3 SSQLTEIFVEAGTVVSVEVMYDRVTDRSRGFAFVTMGSVDDAKEAIRMFDGSQVGGRIVR 62
Query: 233 VN-KAAPRGTQP-ERAPRV-------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNA 283
VN P+G + P++ + +IY GNL W V + L+ VF+E +V+A
Sbjct: 63 VNFPEVPKGGERLVMGPKIRNNNRDFVDSSHKIYAGNLGWRVSSQDLKDVFAEQPGLVSA 122
Query: 284 RVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+V+Y+R++GRSRGFGFVT + ++ A+ ++G + GR +R+N+A
Sbjct: 123 KVIYERDSGRSRGFGFVTFETAQDVEAALKTMNGVEVQGRELRLNLA 169
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
+++L ++F E G VV+ V+YDR T RSRGF FVTM S + +AI DG + GR +R
Sbjct: 3 SSQLTEIFVEAGTVVSVEVMYDRVTDRSRGFAFVTMGSVDDAKEAIRMFDGSQVGGRIVR 62
Query: 327 VNVAE 331
VN E
Sbjct: 63 VNFPE 67
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLF-EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K++ GNL + V S+ L +F E+ G V A+VIY R++ RSRGFGFVT T ++ E A++
Sbjct: 94 KIYAGNLGWRVSSQDLKDVFAEQPGLVS-AKVIYERDSGRSRGFGFVTFETAQDVEAALK 152
Query: 220 MFHRYDIDGRLLTVNKAAPR 239
+ ++ GR L +N AA +
Sbjct: 153 TMNGVEVQGRELRLNLAAVK 172
>gi|255075095|ref|XP_002501222.1| predicted protein [Micromonas sp. RCC299]
gi|226516486|gb|ACO62480.1| predicted protein [Micromonas sp. RCC299]
Length = 199
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 111/195 (56%), Gaps = 10/195 (5%)
Query: 145 EGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFG 204
E E+ V E KL+VGNL + V ++ LA +F + G ++ V+ + T RSRGFG
Sbjct: 2 EAAAEDGAAVSGEEGVKLYVGNLSWGVTNDSLADVFNQYGASDVT-VVTDMNTGRSRGFG 60
Query: 205 FVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR--------- 255
FVT+ A+ + D+DGR + VN + R +P R R G R
Sbjct: 61 FVTVPDQAVADACIAALDGADVDGRAIRVNVSVAREDRPPRPDRPPRDGQRRGYDFDGRK 120
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+Y GNL W +D+ L+ + E G V +AR++ DRET RSRGFGFVTMS+ E + + L
Sbjct: 121 VYFGNLSWGMDHLDLQDLCGEFGTVEDARLITDRETNRSRGFGFVTMSTVAEAEEVVNQL 180
Query: 316 DGQNLDGRAIRVNVA 330
+GQ++DGR +RVN+A
Sbjct: 181 NGQDVDGRVLRVNIA 195
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 121/211 (57%), Gaps = 13/211 (6%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAK----LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVI 192
+R+ E E ++ + VE P A+ LFVGNL +++D + L FE G + +I
Sbjct: 207 KRKAEEAAEPAIKKTKTVEEPAGAEGIKNLFVGNLSWNIDEDWLRREFEGFGEIVGCRII 266
Query: 193 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR-----GTQPERAP 247
+RET R +GFG+V +T +A KA H+Y++DGR L V+ + PR G +RA
Sbjct: 267 TDRETGRGKGFGYVEFATSADAAKAQAEMHQYELDGRPLNVDFSTPRQKPDAGKTNDRAN 326
Query: 248 RVFE----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 303
+ + P +++GNL ++ N ++++F+E+G + + DR+TG +GFG+V
Sbjct: 327 KYGDKRSAPSNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFG 386
Query: 304 SETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
S+ E A+ AL+GQ++ GR IR++ A R+
Sbjct: 387 SQEEATAALDALNGQDIAGRNIRIDYAAPRE 417
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VGNL W +D L + F G++V R++ DRETGR +GFG+V ++ + A A +
Sbjct: 236 LFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQAEM 295
Query: 316 DGQNLDGRAIRVNVAEDRQR 335
LDGR + V+ + RQ+
Sbjct: 296 HQYELDGRPLNVDFSTPRQK 315
>gi|118489861|gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 294
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 120/220 (54%), Gaps = 16/220 (7%)
Query: 125 EPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAG 184
P + + +E E EEEE E KLFV NLP+ + LF + G
Sbjct: 59 HPRSKSLCFQLCSTVQEVTMEITPEEEEIQEANLKRKLFVVNLPWSFSVVDIKDLFGQCG 118
Query: 185 TVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 244
TV E+I ++ RSRGF FVTM+T EEA+ A++ F+ ++ GR++ V + A R +P
Sbjct: 119 TVSDVEII-KQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRV-EFAKRLRRPP 176
Query: 245 RAPRVFEPG-----------FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 293
+PR+ PG ++Y+ NL W+V + L + FS + V++RVV+D GR
Sbjct: 177 -SPRL--PGTPADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGR 233
Query: 294 SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
S G+GFV+ ++ E AI+A G+ L GR IR+ +ED+
Sbjct: 234 SSGYGFVSFATREEAVAAISAFSGKELMGRPIRLKFSEDK 273
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++V NLPW ++ +F + G V + ++ ++ GRSRGF FVTM++ E AI
Sbjct: 95 KLFVVNLPWSFSVVDIKDLFGQCGTVSDVEII-KQKNGRSRGFAFVTMTTGEEAQAAIDK 153
Query: 315 LDGQNLDGRAIRVNVAEDRQR 335
+ + GR IRV A+ +R
Sbjct: 154 FNSLEVSGRIIRVEFAKRLRR 174
>gi|224138144|ref|XP_002326529.1| predicted protein [Populus trichocarpa]
gi|222833851|gb|EEE72328.1| predicted protein [Populus trichocarpa]
Length = 294
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 120/220 (54%), Gaps = 16/220 (7%)
Query: 125 EPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAG 184
P + + +E E EEEE E KLFV NLP+ + LF + G
Sbjct: 59 HPRSKSLCFQLCSTVQEVTVEITPEEEEIQEANLKRKLFVVNLPWSFSVVDIKDLFGQCG 118
Query: 185 TVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 244
TV E+I ++ RSRGF FVTM+T EEA+ A++ F+ ++ GR++ V + A R +P
Sbjct: 119 TVSDVEII-KQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRV-EFAKRLRRPP 176
Query: 245 RAPRVFEPG-----------FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 293
+PR+ PG ++Y+ NL W+V + L + FS + V++RVV+D GR
Sbjct: 177 -SPRL--PGTPADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGR 233
Query: 294 SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
S G+GFV+ ++ E AI+A G+ L GR IR+ +ED+
Sbjct: 234 SSGYGFVSFATREEAVAAISAFSGKELMGRPIRLKFSEDK 273
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++V NLPW ++ +F + G V + ++ ++ GRSRGF FVTM++ E AI
Sbjct: 95 KLFVVNLPWSFSVVDIKDLFGQCGTVSDVEII-KQKNGRSRGFAFVTMTTGEEAQAAIDK 153
Query: 315 LDGQNLDGRAIRVNVAEDRQR 335
+ + GR IRV A+ +R
Sbjct: 154 FNSLEVSGRIIRVEFAKRLRR 174
>gi|357157795|ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 112/187 (59%), Gaps = 12/187 (6%)
Query: 154 VEPPEDA---KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
+E PE+ KL+VGN+P V +++L +F GTV A+V+Y++ + RSR FGFVTMS+
Sbjct: 60 LEAPEELATRKLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGFVTMSS 119
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVN-------KAAPRGTQPERAPRVFEPGFRIYVGNLPW 263
VEEA A+E + ++ GR + VN P +PE P + +++YVGNL
Sbjct: 120 VEEANAAIESLNETEVGGRKIKVNVTESFLPNIDPSAPEPE--PAFVDSQYKVYVGNLAK 177
Query: 264 EVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGR 323
V L+ FSE G+V++A V T +S+G+GFVT SSE E+ A++ + L+G+
Sbjct: 178 TVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVEAAVSTFNNTELEGQ 237
Query: 324 AIRVNVA 330
IRVN A
Sbjct: 238 PIRVNRA 244
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGN+P V N L +F++HG V+ A V+YD+ +GRSR FGFVTMSS E N AI +
Sbjct: 70 KLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGFVTMSSVEEANAAIES 129
Query: 315 LDGQNLDGRAIRVNVAED 332
L+ + GR I+VNV E
Sbjct: 130 LNETEVGGRKIKVNVTES 147
>gi|397576490|gb|EJK50286.1| hypothetical protein THAOC_30767 [Thalassiosira oceanica]
Length = 397
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 8/183 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E AK++VGNL +D +E L FE+ G V + + + + +RGFGF+ MS E++ KA
Sbjct: 194 EGAKIYVGNLNFDTTAEDLKAAFEEFGDVMDCFLPVDYDGN-ARGFGFIQMSD-EDSLKA 251
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERA-PRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
+E + + DGR L VNK+ P+G +P A P+ ++YVGNL W + L ++F E
Sbjct: 252 IEGMNGVEFDGRTLNVNKSLPKGQRPAAAAPKET----KLYVGNLSWGTEEGALRELFGE 307
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+G V++ + DRETG+ RGF FVTM + L A DG LDGR +RVN A+ + +R
Sbjct: 308 YGSVIDCYIPTDRETGQHRGFAFVTMGPDDALR-AADETDGYELDGRILRVNEAQPKGQR 366
Query: 337 SSF 339
+++
Sbjct: 367 NNY 369
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 7/152 (4%)
Query: 190 EVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 249
+V +RET + RGF FV M+ ++ E A+E + +I GR + V+++ P+ E+ +
Sbjct: 127 DVPLSRETGKCRGFAFVAMTNSDDHEAAIEQLNMSEIAGRTIYVSESLPKDQVAEKKKKF 186
Query: 250 F-----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 304
+ G +IYVGNL ++ L+ F E G V++ + D + G +RGFGF+ MS
Sbjct: 187 QGRKKRDEGAKIYVGNLNFDTTAEDLKAAFEEFGDVMDCFLPVDYD-GNARGFGFIQMSD 245
Query: 305 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
E L AI ++G DGR + VN + + +R
Sbjct: 246 EDSLK-AIEGMNGVEFDGRTLNVNKSLPKGQR 276
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P++ KL+VGNL + + L LF + G+V + +RET + RGF FVTM ++A +
Sbjct: 282 PKETKLYVGNLSWGTEEGALRELFGEYGSVIDCYIPTDRETGQHRGFAFVTMGP-DDALR 340
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRG 240
A + Y++DGR+L VN+A P+G
Sbjct: 341 AADETDGYELDGRILRVNEAQPKG 364
>gi|145348372|ref|XP_001418624.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578854|gb|ABO96917.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 151
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 96/148 (64%), Gaps = 10/148 (6%)
Query: 193 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF-- 250
+R T RSRGF FVT+++ E+ E+A+ + D+DGR L V++A G + +R R+
Sbjct: 1 MDRNTGRSRGFAFVTLASAEDMERAMAATNGVDVDGRELRVSQAQTAGERRDRPMRMDGE 60
Query: 251 --------EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 302
R+Y GNL W +D+ L+ + E G V ++R++ DRETGRSRGFGFVTM
Sbjct: 61 RRPQRNRDADNRRVYFGNLSWGMDHLDLQDLCGEFGSVEDSRLITDRETGRSRGFGFVTM 120
Query: 303 SSETELNDAIAALDGQNLDGRAIRVNVA 330
SSE E ++ +A L+GQ++DGR +RVN+A
Sbjct: 121 SSEAEADEVVAQLNGQDVDGRVLRVNIA 148
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
++ +++ GNL + +D L L + G+VE + +I +RET RSRGFGFVTMS+ EA++
Sbjct: 69 ADNRRVYFGNLSWGMDHLDLQDLCGEFGSVEDSRLITDRETGRSRGFGFVTMSSEAEADE 128
Query: 217 AVEMFHRYDIDGRLLTVNKA 236
V + D+DGR+L VN A
Sbjct: 129 VVAQLNGQDVDGRVLRVNIA 148
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 287 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
DR TGRSRGF FVT++S ++ A+AA +G ++DGR +RV+ A+
Sbjct: 1 MDRNTGRSRGFAFVTLASAEDMERAMAATNGVDVDGRELRVSQAQ 45
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 106/179 (59%), Gaps = 8/179 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG L ++VD++ LA F + G V A V +R T RSRGFG+V ST E EKA+E+
Sbjct: 335 IFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSEAVEKAIELN 394
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRV-------FEPGFRIYVGNLPWEVDNARLEQVF 274
+ +IDGR + V+K+ P R R P ++VGNL + +++ L + F
Sbjct: 395 GK-EIDGRAVNVDKSNPPNKDASREKRAKTFGDTTSPPSATLFVGNLSFGMNDDALWEAF 453
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
SEHG+V N R+ DRE+GR +GFG+V S A AA+ G LDGR++R++ ++ R
Sbjct: 454 SEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAHAAMQGVELDGRSVRLDFSQPR 512
>gi|296089370|emb|CBI39142.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 108/172 (62%), Gaps = 13/172 (7%)
Query: 173 SEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 232
S +L +F +AG+V E++Y+R TDRSRGF FVTM +V+EA++A+ MF + GR +
Sbjct: 3 SSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVK 62
Query: 233 VN-KAAPRGTQPERA---PRV-------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
VN PRG ERA P++ + ++IY GNL W + + L F++H ++
Sbjct: 63 VNFPEVPRGG--ERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLL 120
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
A+V+Y+RE+GRSRGFGF++ +S A+ A++ ++GR +R+N+A R
Sbjct: 121 GAKVIYERESGRSRGFGFLSFASAENAESALNAMNEVEVEGRPLRLNLAAVR 172
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVE 212
FV+ P K++ GNL + + SE L F + A+VIY RE+ RSRGFGF++ ++ E
Sbjct: 88 FVDSPY--KIYAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAE 145
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKAAPR 239
AE A+ + +++GR L +N AA R
Sbjct: 146 NAESALNAMNEVEVEGRPLRLNLAAVR 172
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 104/180 (57%), Gaps = 5/180 (2%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
+ +FVG L ++VD E L FE G V A V +R+T RS+GFG+V+ ST E AEKA+
Sbjct: 390 NCNIFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEKAI 449
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR-----IYVGNLPWEVDNARLEQV 273
+ +IDGR + VN A P+ P + F ++VGN+ + + L +
Sbjct: 450 AEMNGKEIDGRAVNVNAATPKTPNPAGRAKQFGDTVSAESKVLFVGNVSFNANEDMLWET 509
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F EHG +V+ R+ DRETG+ +GFG+V +S A AL+G+++ GR IR++ ++ R
Sbjct: 510 FGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAFNALNGKDIAGRNIRLDFSQPR 569
>gi|30693595|ref|NP_566958.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|79314769|ref|NP_001030841.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17979394|gb|AAL49922.1| unknown protein [Arabidopsis thaliana]
gi|22136722|gb|AAM91680.1| unknown protein [Arabidopsis thaliana]
gi|332645382|gb|AEE78903.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332645383|gb|AEE78904.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 253
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 154 VEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTV 211
++P +A ++++GN+P V +E+L L E+ G VE +V+Y++ + RSR FGF TM +V
Sbjct: 68 LDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSV 127
Query: 212 EEAEKAVEMFHRYDIDGRLLTVNKA-APRGTQPERA------PRVFEPGFRIYVGNLPWE 264
E+A VE + ++GR + VN P + P+ + + +++YVGNL
Sbjct: 128 EDANAVVEKLNGNTVEGREIKVNITEKPIASSPDLSVLQSEDSAFVDSPYKVYVGNLAKT 187
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
V LE +FSE GKVV+A+V T +S GFGFVT SSE ++ AI AL+ L+G+
Sbjct: 188 VTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLLEGQK 247
Query: 325 IRVNVA 330
IRVN A
Sbjct: 248 IRVNKA 253
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 241 TQPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 296
T+ E P +P R+Y+GN+P V N +L ++ EHG V +V+YD+ +GRSR
Sbjct: 59 TETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRR 118
Query: 297 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
FGF TM S + N + L+G ++GR I+VN+ E
Sbjct: 119 FGFATMKSVEDANAVVEKLNGNTVEGREIKVNITE 153
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
E+ FV+ P K++VGNL V E L LF + G V A+V T +S GFGFVT
Sbjct: 168 EDSAFVDSP--YKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTF 225
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKA 236
S+ E+ E A+ + ++G+ + VNKA
Sbjct: 226 SSEEDVEAAIVALNNSLLEGQKIRVNKA 253
>gi|222423445|dbj|BAH19693.1| AT3G52150 [Arabidopsis thaliana]
Length = 253
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 154 VEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTV 211
++P +A ++++GN+P V +E+L L E+ G VE +V+Y++ + RSR FGF TM +V
Sbjct: 68 LDPSSEAARRVYIGNIPRTVSNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSV 127
Query: 212 EEAEKAVEMFHRYDIDGRLLTVNKA-APRGTQPERA------PRVFEPGFRIYVGNLPWE 264
E+A VE + ++GR + VN P + P+ + + +++YVGNL
Sbjct: 128 EDANAVVEKLNGNTVEGREIKVNITEKPIASSPDLSVLQSEDSAFVDSPYKVYVGNLAKT 187
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
V LE +FSE GKVV+A+V T +S GFGFVT SSE ++ A+ AL+ L+G+
Sbjct: 188 VTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAVVALNNSLLEGQK 247
Query: 325 IRVNVA 330
IRVN A
Sbjct: 248 IRVNKA 253
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 241 TQPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 296
T+ E P +P R+Y+GN+P V N +L ++ EHG V +V+YD+ +GRSR
Sbjct: 59 TETEEKPAALDPSSEAARRVYIGNIPRTVSNEQLTKLVEEHGAVEKVQVMYDKYSGRSRR 118
Query: 297 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
FGF TM S + N + L+G ++GR I+VN+ E
Sbjct: 119 FGFATMKSVEDANAVVEKLNGNTVEGREIKVNITE 153
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
E+ FV+ P K++VGNL V E L LF + G V A+V T +S GFGFVT
Sbjct: 168 EDSAFVDSP--YKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTF 225
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKA 236
S+ E+ E AV + ++G+ + VNKA
Sbjct: 226 SSEEDVEAAVVALNNSLLEGQKIRVNKA 253
>gi|449436259|ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
sativus]
gi|449489082|ref|XP_004158209.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
sativus]
Length = 251
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 109/178 (61%), Gaps = 9/178 (5%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL++GN+P +V++E+L + ++ G VE AEV+Y++ + RSR F FVTM TVE+A A+E
Sbjct: 75 KLYIGNIPRNVNNEELTRIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIEK 134
Query: 221 FHRYDIDGRLL--------TVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
+ ++ GR + VN Q E + + P +++YVGN+ V L+
Sbjct: 135 LNETEVGGRKIKVNITEKPVVNTVDMSFLQAEESQFIDSP-YKVYVGNISSTVSTETLKN 193
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
FSE GKV++A+V T +S G+GFVT SSE E++ AI++ + L+G+ IRVN A
Sbjct: 194 FFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVDAAISSFNNALLEGQPIRVNKA 251
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++Y+GN+P V+N L ++ EHG V A V+YD+ +GRSR F FVTM + + N AI
Sbjct: 75 KLYIGNIPRNVNNEELTRIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIEK 134
Query: 315 LDGQNLDGRAIRVNVAE 331
L+ + GR I+VN+ E
Sbjct: 135 LNETEVGGRKIKVNITE 151
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 113/202 (55%), Gaps = 6/202 (2%)
Query: 136 GERQ-EESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYN 194
G+R+ EE + + + E E +FVG L ++VD++ LA F+ GTV A V +
Sbjct: 85 GKRKAEEPAQTPAKKAKTDTEAGESNTVFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMD 144
Query: 195 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF---- 250
R + +SRGF +V S+ EA+KAVE + IDGR + V+ + PR PE+ +VF
Sbjct: 145 RNSGKSRGFAYVEFSSPAEAQKAVEEMNGKQIDGREVNVDISQPRQPNPEKRAQVFGDSE 204
Query: 251 -EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
+P ++VGNL W L F E G V + R+ D+E+G+ +GFG+V +
Sbjct: 205 SQPSTTLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQEGAT 264
Query: 310 DAIAALDGQNLDGRAIRVNVAE 331
A A+ G++LDGR +R++ ++
Sbjct: 265 KAYEAMKGKDLDGRTLRLDYSQ 286
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VG L W VDN L Q F G VV ARV DR +G+SRGF +V SS E A+ +
Sbjct: 112 VFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVEEM 171
Query: 316 DGQNLDGRAIRVNVAEDRQ 334
+G+ +DGR + V++++ RQ
Sbjct: 172 NGKQIDGREVNVDISQPRQ 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 25/187 (13%)
Query: 69 SFTTFVAQTS-----DWADQEEDKDNTTITLEQEQEENGEEE----------PNWENQGA 113
S T FV + S DW QE T + + + N + P +
Sbjct: 109 SNTVFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAV 168
Query: 114 DETEGNLSDWGEPEGEDTVVEAGERQEESGEE--GVFEEEEFVEPPEDAKLFVGNLPYDV 171
+E G D G + V+ + ++ + E+ VF + E +P LFVGNL ++
Sbjct: 169 EEMNGKQID-----GREVNVDISQPRQPNPEKRAQVFGDSE-SQP--STTLFVGNLSWNT 220
Query: 172 DSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 231
+ L F + G V + ++E+ + +GFG+V E A KA E D+DGR L
Sbjct: 221 TEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQEGATKAYEAMKGKDLDGRTL 280
Query: 232 TVNKAAP 238
++ + P
Sbjct: 281 RLDYSQP 287
>gi|147859670|emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera]
Length = 355
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 87/145 (60%), Gaps = 9/145 (6%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
EE E P + KL+ GNLPY DS LA + + G+ E+ EV+Y+R+T RSRGF FVTMS+
Sbjct: 57 EEGAESPVNTKLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSS 116
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDN 267
VE+ +E + GR L VN K P + P E ++++VGNL W V +
Sbjct: 117 VEDCNAVIENLDGSEYGGRTLRVNFSDKPKP------KLPLYPETEYKLFVGNLSWSVTS 170
Query: 268 ARLEQVFSEHGKVVNARVVYDRETG 292
L QVF E+G V+ ARV+YD ETG
Sbjct: 171 ESLNQVFQEYGNVIGARVLYDGETG 195
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++Y GNLP+ D+A L + +G V+YDR+TGRSRGF FVTMSS + N I
Sbjct: 67 KLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDCNAVIEN 126
Query: 315 LDGQNLDGRAIRVNVAE 331
LDG GR +RVN ++
Sbjct: 127 LDGSEYGGRTLRVNFSD 143
>gi|357457543|ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula]
gi|355488100|gb|AES69303.1| 30S ribosomal protein [Medicago truncatula]
Length = 235
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 113/189 (59%), Gaps = 5/189 (2%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFV 206
V E+ V+ P KL+VGN+P V +++L + ++ G VE AEV+Y++ + RSR F FV
Sbjct: 47 VSSEQATVDSPALRKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFV 106
Query: 207 TMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APRGTQ--PERA--PRVFEPGFRIYVGNL 261
TM TVE+A A E + +I GR + VN P T+ P +A + +++YVGNL
Sbjct: 107 TMKTVEDANAAAEKLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNL 166
Query: 262 PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLD 321
V + L++ FSE G ++A+V T +S GFGFVT SS+ ++ AI++ + L+
Sbjct: 167 AKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLE 226
Query: 322 GRAIRVNVA 330
G+ IRVN A
Sbjct: 227 GQKIRVNKA 235
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 252 PGFR-IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
P R +YVGN+P V N LE++ EHG V A V+YD+ + RSR F FVTM + + N
Sbjct: 57 PALRKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANA 116
Query: 311 AIAALDGQNLDGRAIRVNVAE 331
A L+G + GR I+VN+ E
Sbjct: 117 AAEKLNGTEIGGREIKVNITE 137
>gi|225450219|ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Vitis vinifera]
gi|297736206|emb|CBI24844.3| unnamed protein product [Vitis vinifera]
Length = 247
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 108/178 (60%), Gaps = 9/178 (5%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+L+VGN+P +DS +LA + E+ G VE AEV+Y++ + RSR F FVTM TVE+A A+E
Sbjct: 71 RLYVGNIPRTLDSAELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIEK 130
Query: 221 FHRYDIDGRLLTVNKA-APRGT------QPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ +I GR + VN P T Q E + + P ++YVGNL V L Q
Sbjct: 131 LNGTEIGGREIKVNITEKPLLTLDMSLLQAEESQFIDSP-HKVYVGNLARTVTTDTLTQF 189
Query: 274 FSEH-GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
FSE GKV++A+V T +S GFGFV+ SSE ++ AI++ + LDG+ IRVN A
Sbjct: 190 FSEKGGKVLSAKVSRVPGTSKSSGFGFVSFSSEEDVEAAISSCNNAFLDGQRIRVNKA 247
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+YVGN+P +D+A L ++ EHG V A V+YD+ +GRSR F FVTM + + N AI
Sbjct: 71 RLYVGNIPRTLDSAELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIEK 130
Query: 315 LDGQNLDGRAIRVNVAE 331
L+G + GR I+VN+ E
Sbjct: 131 LNGTEIGGREIKVNITE 147
>gi|414883566|tpg|DAA59580.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 277
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
Query: 191 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APRG----TQPER 245
+IY++ T+RSRGF FVTM+T EEA KA++MF + GR VN PRG T
Sbjct: 79 IIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRTVTMS 138
Query: 246 APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 305
R + ++IY GNL W V L VF +++ARV+++RETGRSRGFGFV+ S+
Sbjct: 139 GRRRDDGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTA 198
Query: 306 TELNDAIAALDGQNLDGRAIRVNVAE 331
+ A+ +LDG L+GR++R+++AE
Sbjct: 199 EDAQAALESLDGVELEGRSLRLSLAE 224
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K++ GNL + V ++ L +FE + A VI+ RET RSRGFGFV+ ST E+A+ A+E
Sbjct: 148 KIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALES 207
Query: 221 FHRYDIDGRLLTVNKA---APRGTQPERA 246
+++GR L ++ A P G+ P A
Sbjct: 208 LDGVELEGRSLRLSLAEQNPPPGSPPSTA 236
>gi|388508598|gb|AFK42365.1| unknown [Medicago truncatula]
Length = 235
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 112/187 (59%), Gaps = 5/187 (2%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFV 206
V E+ V+ P KL+VGN+P V +++L + ++ G VE AEV+Y++ + RSR F FV
Sbjct: 47 VSSEQATVDSPALRKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFV 106
Query: 207 TMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APRGTQ--PERA--PRVFEPGFRIYVGNL 261
TM TVE+A A E + +I GR + VN P T+ P +A + +++YVGNL
Sbjct: 107 TMKTVEDANAAAEKLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNL 166
Query: 262 PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLD 321
V + L++ FSE G ++A+V T +S GFGFVT SS+ ++ AI++ + L+
Sbjct: 167 AKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLE 226
Query: 322 GRAIRVN 328
G+ IRVN
Sbjct: 227 GQKIRVN 233
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 252 PGFR-IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
P R +YVGN+P V N LE++ EHG V A V+YD+ + RSR F FVTM + + N
Sbjct: 57 PALRKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANA 116
Query: 311 AIAALDGQNLDGRAIRVNVAE 331
A L+G + GR I+VN+ E
Sbjct: 117 AAEKLNGTEIGGREIKVNITE 137
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
E FV+ P K++VGNL +V S+ L F + G A+V T +S GFGFVT S
Sbjct: 151 ESTFVDSP--YKVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFS 208
Query: 210 TVEEAEKAVEMFHRYDIDGRLLTVNK 235
+ E+ E A+ F+ ++G+ + VNK
Sbjct: 209 SDEDVEAAISSFNNALLEGQKIRVNK 234
>gi|255639378|gb|ACU19985.1| unknown [Glycine max]
Length = 142
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 89/142 (62%), Gaps = 14/142 (9%)
Query: 208 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF------------- 254
MS+VEEAE A + F+ Y++DGR L VN P E APR
Sbjct: 1 MSSVEEAEAAAQQFNGYELDGRALRVNSGPPPARN-ESAPRFRGGSSFGSRGGGPSDSEN 59
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R++V NL W VDN L+ +F E G V+ AR +YDRE+GRSRGFGFVT SS E+N AI +
Sbjct: 60 RVHVSNLAWGVDNVALKSLFREQGNVLEARAIYDRESGRSRGFGFVTFSSPDEVNSAIQS 119
Query: 315 LDGQNLDGRAIRVNVAEDRQRR 336
L+G +L+GRAIRV++A+ + ++
Sbjct: 120 LNGVDLNGRAIRVSLADSKPKQ 141
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 157 PEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
P D+ ++ V NL + VD+ L LF + G V A IY+RE+ RSRGFGFVT S+ +E
Sbjct: 54 PSDSENRVHVSNLAWGVDNVALKSLFREQGNVLEARAIYDRESGRSRGFGFVTFSSPDEV 113
Query: 215 EKAVEMFHRYDIDGRLLTVNKA 236
A++ + D++GR + V+ A
Sbjct: 114 NSAIQSLNGVDLNGRAIRVSLA 135
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 105/181 (58%), Gaps = 7/181 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
++FVG L +++D + L FE+ G V+ A V +R++ RSRGFG+V + E A KA++
Sbjct: 206 QIFVGQLSWNIDDDWLKSEFEQLGPVKTARVQLDRQSGRSRGFGYVEFESHELAVKAMDQ 265
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVF-----EPGFRIYVGNLPWEVDNARLEQVFS 275
F +IDGR + V+ + PR PE+ + F +P +++GNL + + R+ + F
Sbjct: 266 FAGKEIDGRPVRVDLSVPRAPNPEKRAKSFGDQRSDPSNTLFIGNLSFNTNEDRVWEFFG 325
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA--EDR 333
E G V + RV DRETG +GFG+V+ + AI G LDGR IR++ + +DR
Sbjct: 326 EFGSVESVRVPTDRETGAPKGFGYVSFADVDTAKAAIDGAAGSELDGRVIRLDFSTPKDR 385
Query: 334 Q 334
Q
Sbjct: 386 Q 386
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 122/212 (57%), Gaps = 22/212 (10%)
Query: 132 VVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEV 191
+V+ + +E + EEGV LFVGN+ +++D + L FE G + V
Sbjct: 205 IVKKSKVEEPAAEEGV------------KNLFVGNMSWNIDEDWLRREFEGFGEIVGCRV 252
Query: 192 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-----RA 246
I +RET R++GFG+V + +A KA + H Y++DGR L V+ + PR +P+ RA
Sbjct: 253 ITDRETGRAKGFGYVEFANAADAAKAQKEMHEYELDGRQLNVDFSTPR-AKPDANGGARA 311
Query: 247 PRVFE----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 302
+ + P +++GN+ +E N +++VF+E+G + + DR+TG +GFG+V
Sbjct: 312 NKYGDKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDF 371
Query: 303 SSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
SS+ E A+ AL+GQ++ GRAIR++ A R+
Sbjct: 372 SSQQEATAALEALNGQDIGGRAIRIDYATPRE 403
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VGN+ W +D L + F G++V RV+ DRETGR++GFG+V ++ + A +
Sbjct: 223 LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFANAADAAKAQKEM 282
Query: 316 DGQNLDGRAIRVNVAEDRQR 335
LDGR + V+ + R +
Sbjct: 283 HEYELDGRQLNVDFSTPRAK 302
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
+R+ E EE V ++ VEP E LF+GNL ++VD E L FE+ G + ++ +R+
Sbjct: 208 KRKAEDEEEVVAPKKTRVEPTEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRD 267
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGTQPERAPRVF 250
+ RS+GFG+V + E+A KA ++DGR L V+ AAPR RA
Sbjct: 268 SGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFG 327
Query: 251 EPGF----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
+ +++GN+ + D + + + F+E+G ++ R+ D E+GR +GFG+V SS
Sbjct: 328 DQKSPESDTLFIGNIAFSADESMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSID 387
Query: 307 ELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
E A +L+G L GRA+R++ + RQ
Sbjct: 388 EARSAFESLNGSELAGRAMRLDFSTPRQ 415
>gi|356525630|ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
max]
Length = 246
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 107/177 (60%), Gaps = 8/177 (4%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+L+VGN+P V +E+LA + ++ G VE AEV+Y++ + RSR F FVTM TVE+A +E
Sbjct: 71 RLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEK 130
Query: 221 FHRYDIDGRLLTVNKA-APRGT------QPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ +I GR + VN P T Q E + + P ++YVGNL V L+
Sbjct: 131 LNGTEIGGREVKVNVTEKPLSTPDLPLLQAEESEFIDSP-HKVYVGNLAKTVTTDTLKNF 189
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
FSE GKV++A+V T +S G+GFVT SSE ++ AI++ + L+G+ IRVN A
Sbjct: 190 FSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSFNNSLLEGQTIRVNKA 246
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+YVGN+P V N L ++ EHG V A V+YD+ +GRSR F FVTM + + I
Sbjct: 71 RLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEK 130
Query: 315 LDGQNLDGRAIRVNVAE 331
L+G + GR ++VNV E
Sbjct: 131 LNGTEIGGREVKVNVTE 147
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
EE EF++ P K++VGNL V ++ L F + G V A+V T +S G+GFVT
Sbjct: 161 EESEFIDSPH--KVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTF 218
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKA 236
S+ E+ E A+ F+ ++G+ + VNKA
Sbjct: 219 SSEEDVEAAISSFNNSLLEGQTIRVNKA 246
>gi|302673016|ref|XP_003026195.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
gi|300099876|gb|EFI91292.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
Length = 218
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 10/185 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E +FVG LP+DVD+++L F K G +E A V+ +R+T SRGFG+V +T E+A+KA
Sbjct: 1 EYTSVFVGGLPFDVDNDRLQQEFAKFGDIESAIVMMDRQTGNSRGFGYVHFATHEQAKKA 60
Query: 218 VEMFHRYDIDGRLL---TVNKAAPRGTQ-PERAPRVF-----EPGFRIYVGNLPWEVDNA 268
E Y++DGR + T K P+G P R F EP ++VGNL W
Sbjct: 61 KEEMDGYELDGRNIRTGTATKPQPKGAHDPSSRARQFGDKPSEPSSTLFVGNLSWSATED 120
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ +F+E+G V N R+ + ETGR +GFG+V A AL G LDGR IR++
Sbjct: 121 AVWGLFNEYG-VKNVRLPTEFETGRPKGFGYVEFEDIEGAKKAYEALAGAELDGRNIRLD 179
Query: 329 VAEDR 333
++ R
Sbjct: 180 YSQPR 184
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VG LP++VDN RL+Q F++ G + +A V+ DR+TG SRGFG+V ++ + A +
Sbjct: 5 VFVGGLPFDVDNDRLQQEFAKFGDIESAIVMMDRQTGNSRGFGYVHFATHEQAKKAKEEM 64
Query: 316 DGQNLDGRAIRVNVAEDRQRRSS 338
DG LDGR IR A Q + +
Sbjct: 65 DGYELDGRNIRTGTATKPQPKGA 87
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
+R+ E EE V ++ VEP E LF+GNL ++VD E L FE+ G + ++ +R+
Sbjct: 224 KRKAEDEEEVVAPKKTKVEPTEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRD 283
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGTQPERAPRVF 250
T RS+GFG+V + E+A KA ++DGR L V+ AAPR RA
Sbjct: 284 TGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFG 343
Query: 251 EP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
+ +++GN+ + D + + F+E+G ++ R+ D E+GR +GFG+V SS
Sbjct: 344 DQRSPESDTLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSID 403
Query: 307 ELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
E A +L+G L GRA+R++ + RQ
Sbjct: 404 EARSAFESLNGSELAGRAMRLDFSTPRQ 431
>gi|255548039|ref|XP_002515076.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223545556|gb|EEF47060.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 281
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 102/187 (54%), Gaps = 10/187 (5%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P +L+V NLP D +L LF+ GTV EV N ET SRG GFVTM ++ A+
Sbjct: 95 PRPCELYVCNLPRSCDIAELVELFKPYGTVISVEVSRNPETGISRGCGFVTMGSINSAKN 154
Query: 217 AVEMFHRYDIDGRLLTVN-----KAAPRGTQP-ERAPR---VFEPGFRIYVGNLPWEVDN 267
A+ DI GR + V + R +P AP +E F++YVGNL W V
Sbjct: 155 AIAALDGSDIGGREMRVKFSVDMNSGRRNPEPLSSAPTKNLFYESPFKVYVGNLAWTVKP 214
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L FS+ G VV+ARV+YDR+ G++R +GF++ SS E DA + +G++ GR + V
Sbjct: 215 EELRDQFSKFGTVVSARVLYDRKAGKNRAYGFLSFSSTKE-RDAALSFNGKDFRGRILVV 273
Query: 328 NVAEDRQ 334
+R+
Sbjct: 274 RKGVERE 280
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 240 GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 299
G Q ++ PR E +YV NLP D A L ++F +G V++ V + ETG SRG GF
Sbjct: 88 GRQLKKQPRPCE----LYVCNLPRSCDIAELVELFKPYGTVISVEVSRNPETGISRGCGF 143
Query: 300 VTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
VTM S +AIAALDG ++ GR +RV + D
Sbjct: 144 VTMGSINSAKNAIAALDGSDIGGREMRVKFSVD 176
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 9/184 (4%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
PE +FVG L + VD+++LA F + G V A V +R T RSRGFG+V ST + EK
Sbjct: 305 PETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEK 364
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQP--ERAPRVFE-----PGFRIYVGNLPWEVDNAR 269
A++M + Y+IDGR + V+ + P + ER +VF P +++GNLP+ +
Sbjct: 365 ALKM-NGYEIDGRAIKVDLSTPPNSNQIRERRAKVFNDEISPPSSTLFIGNLPFSITEDG 423
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L F H V R+ DRETG+ +GFG+V + + + A A+ GQ ++GR +RV+
Sbjct: 424 LWSYFDGHS-VKTIRLPTDRETGQLKGFGYVELENVEDAKKAFEAISGQEIEGRRVRVDY 482
Query: 330 AEDR 333
++ R
Sbjct: 483 SQPR 486
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 11/106 (10%)
Query: 242 QPERAPRVFEPG----FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 297
QPE +P I+VG L W VDN RL Q FSE G+V +A V DR TGRSRGF
Sbjct: 292 QPEAKKVKLDPATPETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGF 351
Query: 298 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVA------EDRQRRS 337
G+V S+ + A+ ++G +DGRAI+V+++ + R+RR+
Sbjct: 352 GYVHFSTADAVEKAL-KMNGYEIDGRAIKVDLSTPPNSNQIRERRA 396
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 9/184 (4%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
PE +FVG L + VD+++LA F + G V A V +R T RSRGFG+V ST + EK
Sbjct: 305 PETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEK 364
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQP--ERAPRVFE-----PGFRIYVGNLPWEVDNAR 269
A++M + Y+IDGR + V+ + P + ER +VF P +++GNLP+ +
Sbjct: 365 ALKM-NGYEIDGRAIKVDLSTPPNSNQIRERRAKVFNDEISPPSSTLFIGNLPFSITEDG 423
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L F H V R+ DRETG+ +GFG+V + + + A A+ GQ ++GR +RV+
Sbjct: 424 LWSYFDGHS-VKTIRLPTDRETGQLKGFGYVELENVEDAKKAFEAISGQEIEGRRVRVDY 482
Query: 330 AEDR 333
++ R
Sbjct: 483 SQPR 486
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 11/106 (10%)
Query: 242 QPERAPRVFEPG----FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 297
QPE +P I+VG L W VDN RL Q FSE G+V +A V DR TGRSRGF
Sbjct: 292 QPEAKKVKLDPATPETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGF 351
Query: 298 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVA------EDRQRRS 337
G+V S+ + A+ ++G +DGRAI+V+++ + R+RR+
Sbjct: 352 GYVHFSTADAVEKAL-KMNGYEIDGRAIKVDLSTPPNSNQIRERRA 396
>gi|255573485|ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532973|gb|EEF34739.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 278
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 4/186 (2%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
EE E + KL+V NLP+ + + LF + GTV E+I ++ RSRGF FVT+++
Sbjct: 74 EETQETTQKRKLYVFNLPWSLSVVDIKNLFGQCGTVTDVEII-KQKNGRSRGFAFVTLAS 132
Query: 211 VEEAEKAVEMFHRYDIDGRLLTV---NKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDN 267
EEA+ A++ +++ GR++ V + P E +IYV NL W+V +
Sbjct: 133 GEEAQAAIDKLDSHEVSGRIIRVEFAKRLKPPSPPSPTGTSARETRHKIYVSNLAWKVRS 192
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L + FS + V++RVV+D TGRS G+GFV+ ++ E AI+ALDG+ L GR +R+
Sbjct: 193 THLREFFSTNFSPVSSRVVFDSPTGRSSGYGFVSFATREEAEAAISALDGKELMGRPLRL 252
Query: 328 NVAEDR 333
++ +
Sbjct: 253 KFSDRK 258
>gi|225427185|ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
vinifera]
Length = 288
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 7/186 (3%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
E+ EP + KLFV NLP+ + + LF + GTV E+I ++ RSRG+ FVTM +
Sbjct: 80 EQTQEPNQKRKLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKD-GRSRGYAFVTMDS 138
Query: 211 VEEAEKAVEMFHRYDIDGRLLTV------NKAAPRGTQPERAPRVFEPGFRIYVGNLPWE 264
EEA+ VE F Y++ GR++ V K +P P P E ++YV NL W+
Sbjct: 139 GEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWK 198
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
V + L + FS + V+ RVV+D +GRS G+GF + +++ E AI+ALDG+ L GR
Sbjct: 199 VRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRP 258
Query: 325 IRVNVA 330
+ + +
Sbjct: 259 VHLKFS 264
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++V NLPW + ++ +F E G V + ++ ++ GRSRG+ FVTM S E +
Sbjct: 90 KLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKD-GRSRGYAFVTMDSGEEAQAVVEK 148
Query: 315 LDGQNLDGRAIRVNVAE 331
D L GR IRV A+
Sbjct: 149 FDSYELSGRIIRVEFAK 165
>gi|397642327|gb|EJK75167.1| hypothetical protein THAOC_03118, partial [Thalassiosira oceanica]
Length = 452
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 103/189 (54%), Gaps = 18/189 (9%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL++GNL Y D +L +F G V + R T R RGFGFVT+ST + AE A+
Sbjct: 20 KLYIGNLDYSTDEPQLRSVFGAFGAVTDVFLPMERGTSRPRGFGFVTLSTRQAAEDAIAK 79
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG----------------FRIYVGNLPWE 264
+ +DGR + VN++ PRG P A R EPG ++YVGNL ++
Sbjct: 80 MDQSQLDGRTIRVNESRPRGEGPG-ARRSNEPGTGPGGYGAFNPQGREDVKLYVGNLSFD 138
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
+ + +F ++G V + + DR+TGR RGF FVTM ++ E A ++G LDGR
Sbjct: 139 TNEEAVRSMFEQYGTVSDCFLPSDRDTGRPRGFAFVTMPAK-EAETACNKVNGMELDGRT 197
Query: 325 IRVNVAEDR 333
+RVN A+ +
Sbjct: 198 VRVNEAQPK 206
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
+R+ E EE V ++ VEP E LF+GNL ++VD E L FE+ G + ++ +R+
Sbjct: 224 KRKAEDEEEVVAPKKTKVEPTEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRD 283
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGTQPERAPRVF 250
+ RS+GFG+V + E+A KA ++DGR L V+ AAPR RA
Sbjct: 284 SGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFG 343
Query: 251 EP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
+ +++GN+ + D + + F+E+G ++ R+ D E+GR +GFG+V SS
Sbjct: 344 DQRSPESDTLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFSSID 403
Query: 307 ELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
E A +L+G L GRA+R++ + RQ
Sbjct: 404 EARSAFESLNGSELAGRAMRLDFSTPRQ 431
>gi|297742089|emb|CBI33876.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 7/186 (3%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
E+ EP + KLFV NLP+ + + LF + GTV E+I ++ RSRG+ FVTM +
Sbjct: 50 EQTQEPNQKRKLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKD-GRSRGYAFVTMDS 108
Query: 211 VEEAEKAVEMFHRYDIDGRLLTV------NKAAPRGTQPERAPRVFEPGFRIYVGNLPWE 264
EEA+ VE F Y++ GR++ V K +P P P E ++YV NL W+
Sbjct: 109 GEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWK 168
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
V + L + FS + V+ RVV+D +GRS G+GF + +++ E AI+ALDG+ L GR
Sbjct: 169 VRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRP 228
Query: 325 IRVNVA 330
+ + +
Sbjct: 229 VHLKFS 234
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 236 AAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 295
A P TQ R +++V NLPW + ++ +F E G V + ++ ++ GRSR
Sbjct: 47 AKPEQTQEPNQKR------KLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKD-GRSR 99
Query: 296 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
G+ FVTM S E + D L GR IRV A+
Sbjct: 100 GYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAK 135
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 115/203 (56%), Gaps = 19/203 (9%)
Query: 150 EEEFVEPPEDAK-----------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETD 198
EEE + P + A+ +FVG L ++VD++ L FE G V A V+++R++
Sbjct: 172 EEESIAPAKKARADGGDEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQ 231
Query: 199 RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR--GTQPERAPRVFE----- 251
+SRGFG+V + +E + KA+E +IDGR + VN A R E+ RVF
Sbjct: 232 KSRGFGYVEFADLESSAKAIEK-DGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSP 290
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +++G+L + V ++ + F +HG V + R+ DR+TG +GFG+V SS + + A
Sbjct: 291 PAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAA 350
Query: 312 IAALDGQNLDGRAIRVNVAEDRQ 334
+ A++G + GRAIRV+ A +Q
Sbjct: 351 LKAMNGAEIAGRAIRVDFAPPKQ 373
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 115/203 (56%), Gaps = 19/203 (9%)
Query: 150 EEEFVEPPEDAK-----------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETD 198
EEE + P + A+ +FVG L ++VD++ L FE G V A V+++R++
Sbjct: 175 EEESIAPAKKARADGGDEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQ 234
Query: 199 RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR--GTQPERAPRVFE----- 251
+SRGFG+V + +E + KA+E +IDGR + VN A R E+ RVF
Sbjct: 235 KSRGFGYVEFADLESSAKAIEK-DGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSP 293
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +++G+L + V ++ + F +HG V + R+ DR+TG +GFG+V SS + + A
Sbjct: 294 PAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAA 353
Query: 312 IAALDGQNLDGRAIRVNVAEDRQ 334
+ A++G + GRAIRV+ A +Q
Sbjct: 354 LKAMNGAEIAGRAIRVDFAPPKQ 376
>gi|326497679|dbj|BAK05929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 117/241 (48%), Gaps = 16/241 (6%)
Query: 103 EEEPNW-ENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEF-VEPPEDA 160
EE W +Q + E N +W G + GE + GE + + P
Sbjct: 72 EETARWPASQAQSDDEDNEQEWA---GGNGTAAHGEEEHYGGEPAAEDGSGWDRRRPRPR 128
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+LFV NLP ++L LF GTV EV + ET SRG GFVTM ++ EA A+
Sbjct: 129 ELFVCNLPRRCGVDELLELFGPYGTVLSVEVSRDAETGISRGCGFVTMRSLAEARTAINA 188
Query: 221 FHRYDIDGRLLTVNKAA--------PRGTQ--PERAPRVFEPGFRIYVGNLPWEVDNARL 270
+D+DGR + V AA P G P +FE ++IYVGNL W V L
Sbjct: 189 LDGFDLDGREMFVKLAAHVIASRRNPGGLSHTPPMKDHIFESRYKIYVGNLAWSVQPQHL 248
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ F++ G VV+ R++ DR+ GRSR +GF++ SS EL A+ L+ GR I V A
Sbjct: 249 REHFTKCGTVVSTRLLTDRKGGRSRVYGFLSFSSAEELEAAL-QLNNTEFHGRDIIVREA 307
Query: 331 E 331
Sbjct: 308 H 308
>gi|118489133|gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 255
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 109/186 (58%), Gaps = 10/186 (5%)
Query: 154 VEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTV 211
V+P +A +L+VGN+P + +E+L + E+ G VE AEV+Y++ + RSR F FVTM T
Sbjct: 71 VDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTA 130
Query: 212 EEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV-------FEPGFRIYVGNLPWE 264
E+A A+E + +I GR + VN + Q P + + +++YVGNL
Sbjct: 131 EDANAAIEKLNGTEIGGREIKVN-ITEKPLQSLDLPSLQSDETQFVDSPYKVYVGNLAKT 189
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
V L+ FS+ G V++A+V T +S GFGFVT SSE ++ AI++ + L+G+
Sbjct: 190 VATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAISSFNNSLLEGQP 249
Query: 325 IRVNVA 330
IRVN A
Sbjct: 250 IRVNKA 255
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
E R+YVGN+P + N L ++ EHG V A V+YD+ +GRSR F FVTM + + N
Sbjct: 76 EAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTAEDANA 135
Query: 311 AIAALDGQNLDGRAIRVNVAE 331
AI L+G + GR I+VN+ E
Sbjct: 136 AIEKLNGTEIGGREIKVNITE 156
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
+E +FV+ P K++VGNL V ++ L F K G V A+V T +S GFGFVT
Sbjct: 170 DETQFVDSPY--KVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTF 227
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKA 236
S+ E+ E A+ F+ ++G+ + VNKA
Sbjct: 228 SSEEDVEVAISSFNNSLLEGQPIRVNKA 255
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 105/184 (57%), Gaps = 12/184 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVGN+ ++VD E L FE+ G + +I +R++ RS+GFG+V S + A+KA+E
Sbjct: 244 LFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFSDPQNAKKALEAK 303
Query: 222 HRYDIDGRLLTVNKAAPR--------GTQPERAPRVFE----PGFRIYVGNLPWEVDNAR 269
+ ++DGR L ++ + PR +RA R + P ++VGN+ ++ D
Sbjct: 304 NGAELDGRELRLDFSTPRTNDGPGAGNKSNDRAARFGDTTNAPAATLFVGNISFDADENA 363
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
+ + F EHG + R+ DRETG +GFG+V MSS E A AL G ++ GR IR++
Sbjct: 364 ITEYFQEHGTIKAVRLPTDRETGAPKGFGYVEMSSIEEAQAAFTALQGADIAGRPIRLDY 423
Query: 330 AEDR 333
A +R
Sbjct: 424 AAER 427
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P ++VGN+ W VD L + F E G++ R++ DR++GRS+GFG+V S A
Sbjct: 240 PTGNLFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFSDPQNAKKA 299
Query: 312 IAALDGQNLDGRAIRVNVAEDR 333
+ A +G LDGR +R++ + R
Sbjct: 300 LEAKNGAELDGRELRLDFSTPR 321
>gi|224106031|ref|XP_002314019.1| predicted protein [Populus trichocarpa]
gi|222850427|gb|EEE87974.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 109/186 (58%), Gaps = 10/186 (5%)
Query: 154 VEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTV 211
V+P +A +L+VGN+P + +E+L + E+ G VE AEV+Y++ + RSR F FVTM T
Sbjct: 71 VDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTA 130
Query: 212 EEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV-------FEPGFRIYVGNLPWE 264
E+A A+E + +I GR + VN + Q P + + +++YVGNL
Sbjct: 131 EDANAAIEKLNGTEIGGREIKVN-ITEKPLQSLDLPSLQSDESQFVDSPYKVYVGNLAKT 189
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
V L+ FS+ G V++A+V T +S GFGFVT SSE ++ AI++ + L+G+
Sbjct: 190 VATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAISSFNNSLLEGQP 249
Query: 325 IRVNVA 330
IRVN A
Sbjct: 250 IRVNKA 255
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+YVGN+P + N L ++ EHG V A V+YD+ +GRSR F FVTM + + N AI
Sbjct: 80 RLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTAEDANAAIEK 139
Query: 315 LDGQNLDGRAIRVNVAE 331
L+G + GR I+VN+ E
Sbjct: 140 LNGTEIGGREIKVNITE 156
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
+E +FV+ P K++VGNL V ++ L F K G V A+V T +S GFGFVT
Sbjct: 170 DESQFVDSPY--KVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTF 227
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKA 236
S+ E+ E A+ F+ ++G+ + VNKA
Sbjct: 228 SSEEDVEVAISSFNNSLLEGQPIRVNKA 255
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 118/207 (57%), Gaps = 11/207 (5%)
Query: 137 ERQEESGEEGVFEEEEFVEP-PEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIY 193
+R+ E E V ++ + EP ED LFVGNL +++D + L FE G + VI
Sbjct: 222 KRKAEEVAEPVIKKTKTDEPVAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVIT 281
Query: 194 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE-- 251
+RET R++GFG+V + +A KA + H Y++DGR L V+ + PR +P+ R +
Sbjct: 282 DRETGRAKGFGYVEFAKAADAAKAQKDMHEYELDGRPLNVDFSTPR-QKPDANARANKFG 340
Query: 252 -----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
P +++GNL ++ N +++VF+E+G V + DR++G +GFG+V S+
Sbjct: 341 DKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQE 400
Query: 307 ELNDAIAALDGQNLDGRAIRVNVAEDR 333
E A+ AL GQ++ GR +RV+ A R
Sbjct: 401 EATAALEALQGQDVAGRPLRVDFAAPR 427
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VGNL W +D L + F G++V RV+ DRETGR++GFG+V + + A +
Sbjct: 250 LFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAAKAQKDM 309
Query: 316 DGQNLDGRAIRVNVAEDRQR 335
LDGR + V+ + RQ+
Sbjct: 310 HEYELDGRPLNVDFSTPRQK 329
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 118/207 (57%), Gaps = 11/207 (5%)
Query: 137 ERQEESGEEGVFEEEEFVEP-PEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIY 193
+R+ E E V ++ + EP ED LFVGNL +++D + L FE G + VI
Sbjct: 209 KRKAEEVAEPVIKKTKTDEPVAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVIT 268
Query: 194 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE-- 251
+RET R++GFG+V + +A KA + H Y++DGR L V+ + PR +P+ R +
Sbjct: 269 DRETGRAKGFGYVEFAKAADAAKAQKDMHEYELDGRPLNVDFSTPR-QKPDANARANKFG 327
Query: 252 -----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
P +++GNL ++ N +++VF+E+G V + DR++G +GFG+V S+
Sbjct: 328 DKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQE 387
Query: 307 ELNDAIAALDGQNLDGRAIRVNVAEDR 333
E A+ AL GQ++ GR +RV+ A R
Sbjct: 388 EATAALEALHGQDVAGRPLRVDFAAPR 414
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VGNL W +D L + F G++V RV+ DRETGR++GFG+V + + A +
Sbjct: 237 LFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAAKAQKDM 296
Query: 316 DGQNLDGRAIRVNVAEDRQR 335
LDGR + V+ + RQ+
Sbjct: 297 HEYELDGRPLNVDFSTPRQK 316
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 101/174 (58%), Gaps = 6/174 (3%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG L +++D++ LA F G V A ++ +R+T RSRGFG+V + V+ A KA+E F
Sbjct: 206 VFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEFADVDSAIKAIE-F 264
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE-----PGFRIYVGNLPWEVDNARLEQVFSE 276
++DGR + VN A R ++ +VF P +++G+LP++ + + F E
Sbjct: 265 EGKELDGRAVRVNFANARKPDADKRAKVFNDKRSPPADTLWIGSLPFDTTEDHIYETFGE 324
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+G V + R+ DRETG ++GFG+VT + A+ AL+G R IR++ A
Sbjct: 325 YGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAALEALNGSEFGSRRIRIDFA 378
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VG L W +DN L F+ G+VV+AR+V DR+T RSRGFG+V + +++ AI A+
Sbjct: 206 VFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEFA---DVDSAIKAI 262
Query: 316 D--GQNLDGRAIRVNVAEDRQ 334
+ G+ LDGRA+RVN A R+
Sbjct: 263 EFEGKELDGRAVRVNFANARK 283
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
PP D L++G+LP+D + + F + G V+ + +RET ++GFG+VT V +A
Sbjct: 299 PPADT-LWIGSLPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQAT 357
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPR 239
A+E + + R + ++ A P+
Sbjct: 358 AALEALNGSEFGSRRIRIDFAPPK 381
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 103/178 (57%), Gaps = 6/178 (3%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG L ++VD E L F +AG V A V +R+T +S+GFG+V + A+KAVE
Sbjct: 274 IFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASAKKAVETM 333
Query: 222 HRYDIDGRLLTVNKAAPRG-TQPERAPRVF-----EPGFRIYVGNLPWEVDNARLEQVFS 275
+ +IDGR + ++ A PRG PER + F EP ++VGNL + + ++F
Sbjct: 334 NGREIDGRPVNLDLATPRGPPNPERRAKAFGDSRSEPSATLFVGNLAFSATQDAVYELFG 393
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G+VVN R+ DR++G+ +GFG+V + + A+ L G + +GR IR++ + R
Sbjct: 394 AVGEVVNVRLPTDRDSGQPKGFGYVEFADVETASKALNELGGTDFEGRNIRLDFSAPR 451
>gi|255544262|ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223547691|gb|EEF49184.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 256
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 106/177 (59%), Gaps = 8/177 (4%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+L++GN+P VD+++L + E+ G VE AEV+Y++ + RSR F FVTM TVE+A +E
Sbjct: 81 RLYIGNIPRTVDNDELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMRTVEDANAVIEK 140
Query: 221 FHRYDIDGRLLTVN---KAAPRG----TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ I GR + VN K G Q E + V P ++YVGNL V + L+
Sbjct: 141 LNGTQIGGREIKVNITEKPLASGDLSFLQLEESQFVDSPH-KVYVGNLAKTVTSEILKNF 199
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
FSE GKV++A+V T +S G+GFV+ S E ++ AI++ + L+G+ IRVN A
Sbjct: 200 FSEKGKVLSAKVSRVPGTSKSSGYGFVSFSEEEDVEAAISSFNNSLLEGQKIRVNKA 256
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
E R+Y+GN+P VDN L ++ EHG V A V+YD+ +GRSR F FVTM + + N
Sbjct: 77 EAAKRLYIGNIPRTVDNDELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMRTVEDANA 136
Query: 311 AIAALDGQNLDGRAIRVNVAE 331
I L+G + GR I+VN+ E
Sbjct: 137 VIEKLNGTQIGGREIKVNITE 157
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 128 GEDTVVEAGERQEESGEEGVF--EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGT 185
G + V E+ SG+ EE +FV+ P K++VGNL V SE L F + G
Sbjct: 148 GREIKVNITEKPLASGDLSFLQLEESQFVDSPH--KVYVGNLAKTVTSEILKNFFSEKGK 205
Query: 186 VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 236
V A+V T +S G+GFV+ S E+ E A+ F+ ++G+ + VNKA
Sbjct: 206 VLSAKVSRVPGTSKSSGYGFVSFSEEEDVEAAISSFNNSLLEGQKIRVNKA 256
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 10/184 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LF+GNL ++VD E L F + G + ++ +RE+ RSRGFG+V ++ +A KA+E
Sbjct: 252 ANLFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRESGRSRGFGYVEYTSAADAAKAME 311
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER---APRVFEPGFR-------IYVGNLPWEVDNAR 269
D+DGR + ++ AAPR P++ R G + ++VGNLP+
Sbjct: 312 AKKGTDLDGRTINLDYAAPRQANPQQDRTQDRARSYGDQTSPESDTLFVGNLPFSATEDA 371
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L +VF HG V+ R+ ++ETGR +GFG+V SS E A AL+G L+GRA+R++
Sbjct: 372 LHEVFGAHGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHGALNGHELEGRAVRLDF 431
Query: 330 AEDR 333
+ R
Sbjct: 432 STPR 435
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+++GNL W VD L++ FSE G++ R+V DRE+GRSRGFG+V +S + A+ A
Sbjct: 254 LFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRESGRSRGFGYVEYTSAADAAKAMEAK 313
Query: 316 DGQNLDGRAIRVNVAEDRQ 334
G +LDGR I ++ A RQ
Sbjct: 314 KGTDLDGRTINLDYAAPRQ 332
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
PE LFVGNLP+ + L +F G+V + +ET R +GFG+V S+++EA+
Sbjct: 353 PESDTLFVGNLPFSATEDALHEVFGAHGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKA 412
Query: 217 AVEMFHRYDIDGRLLTVNKAAPR 239
A + ++++GR + ++ + PR
Sbjct: 413 AHGALNGHELEGRAVRLDFSTPR 435
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG L ++VD++ L FE G V A V+++R++ +SRGFG+V + +E + KA+E
Sbjct: 196 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEASAKAIEK- 254
Query: 222 HRYDIDGRLLTVNKAAPRGTQ--PERAPRVFE-----PGFRIYVGNLPWEVDNARLEQVF 274
+IDGR + VN A R E+ +VF P +++G+L + V ++ + F
Sbjct: 255 DGSEIDGRAIRVNYATQRKPNEAAEKRAKVFNDKQSPPAETLWIGSLSFSVTEDQVYEAF 314
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
+HG V + R+ DR+TG +GFG+V SS + + A+ A++G + GRAIRV+ A +Q
Sbjct: 315 GQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKAMNGAEIAGRAIRVDFAPPKQ 374
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFV 206
VF +++ PP + L++G+L + V +++ F + G V+ + +R+T +GFG+V
Sbjct: 284 VFNDKQ--SPPAET-LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYV 340
Query: 207 TMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 239
S+VE+A A++ + +I GR + V+ A P+
Sbjct: 341 QFSSVEDASAALKAMNGAEIAGRAIRVDFAPPK 373
>gi|414884784|tpg|DAA60798.1| TPA: hypothetical protein ZEAMMB73_633133 [Zea mays]
Length = 244
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 114/210 (54%), Gaps = 8/210 (3%)
Query: 126 PEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGT 185
P V G S V E E V KL+VGN+P V +++L +F GT
Sbjct: 38 PAAAPQVSRRGSALRVSASSAVLEAPEAVA---ARKLYVGNIPRTVTNDELRDMFAAHGT 94
Query: 186 VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA---APR--G 240
VE AEV+Y++ T+RSR FGFVTMST EEA AVE + ++ R + VN P
Sbjct: 95 VERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEALNGTEVGDRKIKVNVTESFLPNIDR 154
Query: 241 TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 300
+ PE + +++YVGNL V L+ FSE G +++A V + T +S+G+GFV
Sbjct: 155 SAPEPEALFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFV 214
Query: 301 TMSSETELNDAIAALDGQNLDGRAIRVNVA 330
T SSE E+ A+A + L+G+ IRVN A
Sbjct: 215 TFSSEEEVEAAVATFNNAELEGQLIRVNRA 244
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGN+P V N L +F+ HG V A V+YD+ T RSR FGFVTMS+ E N A+ A
Sbjct: 70 KLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEA 129
Query: 315 LDGQNLDGRAIRVNVAED 332
L+G + R I+VNV E
Sbjct: 130 LNGTEVGDRKIKVNVTES 147
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 107/179 (59%), Gaps = 8/179 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVG+L +++D + L FE G + VI +RE+ RS+GFG+V ++ +A KA
Sbjct: 200 LFVGSLSWNIDEDWLRREFEGFGEITGCRVITDRESGRSKGFGYVEFASAADAAKAKAEM 259
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE-------PGFRIYVGNLPWEVDNARLEQVF 274
H Y++DGR L V+ + PR +P+++ R + P +++GNL ++ N ++++F
Sbjct: 260 HEYELDGRGLNVDFSTPR-EKPDQSARANKYGDKRSAPANTLFLGNLSFDCSNEGIQEIF 318
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
E+G + + DR+TG +GFG+V + E A+ AL+GQ ++GRAIR++ A R
Sbjct: 319 QEYGNITRVSLPTDRDTGSLKGFGYVDFGTVEEATAALEALNGQEVEGRAIRIDYAAPR 377
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VG+L W +D L + F G++ RV+ DRE+GRS+GFG+V +S + A A +
Sbjct: 200 LFVGSLSWNIDEDWLRREFEGFGEITGCRVITDRESGRSKGFGYVEFASAADAAKAKAEM 259
Query: 316 DGQNLDGRAIRVNVAEDRQR 335
LDGR + V+ + R++
Sbjct: 260 HEYELDGRGLNVDFSTPREK 279
>gi|356557128|ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
max]
Length = 246
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 106/177 (59%), Gaps = 8/177 (4%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+L+VGN+P V +++LA + ++ G VE AEV+Y++ + RSR F FVTM TVE+A +E
Sbjct: 71 RLYVGNIPRTVTNDELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEK 130
Query: 221 FHRYDIDGRLLTVNKA-APRGT------QPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ ++ GR + VN P T Q E + + P ++YVGNL V L+
Sbjct: 131 LNGTELGGREIKVNVTEKPLSTLDLPLLQAEESEFIDSP-HKVYVGNLAKTVTTDTLKNF 189
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
FSE GKV++A+V T +S G+GFVT SE ++ AI++ + L+G+ IRVN A
Sbjct: 190 FSEKGKVLSAKVSRVPGTSKSSGYGFVTFPSEEDVEAAISSFNNSLLEGQTIRVNKA 246
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+YVGN+P V N L ++ EHG V A V+YD+ +GRSR F FVTM + + I
Sbjct: 71 RLYVGNIPRTVTNDELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEK 130
Query: 315 LDGQNLDGRAIRVNVAE 331
L+G L GR I+VNV E
Sbjct: 131 LNGTELGGREIKVNVTE 147
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
EE EF++ P K++VGNL V ++ L F + G V A+V T +S G+GFVT
Sbjct: 161 EESEFIDSPH--KVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTF 218
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKA 236
+ E+ E A+ F+ ++G+ + VNKA
Sbjct: 219 PSEEDVEAAISSFNNSLLEGQTIRVNKA 246
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 108/187 (57%), Gaps = 12/187 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LF GNL ++VD E L FE+ G + A ++ +RE+ RSRGFG+V + VE+A KA
Sbjct: 233 ANLFAGNLSWNVDEEWLRSEFEEFGELVGARIVTDRESGRSRGFGYVEFANVEDAVKAHA 292
Query: 220 MFHRYDIDGRLLTVNKAAPR----GTQPERA-PRVFEPGFR-------IYVGNLPWEVDN 267
++DGR L ++ A R G ERA R G + +++GNLP+ D
Sbjct: 293 AKKDAELDGRKLNLDFANARTNAGGNPRERADSRAKSFGDQTSPESDTLFLGNLPFSADE 352
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
++++FS+HG ++ R+ D ++GR +GFG+V SS E A+ A G +L GRAIR+
Sbjct: 353 NAVQELFSKHGSILGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAEYGADLGGRAIRI 412
Query: 328 NVAEDRQ 334
+ + RQ
Sbjct: 413 DFSTPRQ 419
>gi|357139508|ref|XP_003571323.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 288
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 12/185 (6%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P +LFV NLP + L LF+ GTV EV + ET SRG GFVTM ++ A
Sbjct: 98 PRPRELFVCNLPRRCGVDDLLHLFQPYGTVLSVEVSRDPETGISRGCGFVTMRSLAAART 157
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAP----------RVFEPGFRIYVGNLPWEVD 266
A+ +D+DGR + V K A R P +FE ++IYVGNL W V
Sbjct: 158 AMNALDGFDLDGREMFV-KLASHVVSNRRNPSLSHTAPMKDHIFESPYKIYVGNLAWSVQ 216
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
L ++F++ G +V+ R++ DR+ R+R +GF++ SS EL DA L+ N GR I
Sbjct: 217 PQHLRELFTQCGNIVSTRLLTDRKGARNRVYGFLSFSSPEEL-DAALKLNNTNFHGRDII 275
Query: 327 VNVAE 331
V A
Sbjct: 276 VREAH 280
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 105/180 (58%), Gaps = 8/180 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG L ++VD++ L FE G V A V+++R++ +SRGFG+V + + + KA+E
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLGSSAKAIEK- 256
Query: 222 HRYDIDGRLLTVNKAAPRGTQ--PERAPRVFE-----PGFRIYVGNLPWEVDNARLEQVF 274
+IDGR + VN A R E+ RVF P +++G+L + V ++ + F
Sbjct: 257 DGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAF 316
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
+HG V + R+ DR+TG +GFG+V SS + A+ A++G + GRAIRV+ A +Q
Sbjct: 317 GQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDATAALKAMNGAEIAGRAIRVDFAPPKQ 376
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
PP + L++G+L + V +++ F + G V+ + +R+T +GFG+V S+V++A
Sbjct: 293 PPAET-LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDAT 351
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPR 239
A++ + +I GR + V+ A P+
Sbjct: 352 AALKAMNGAEIAGRAIRVDFAPPK 375
>gi|125599171|gb|EAZ38747.1| hypothetical protein OsJ_23149 [Oryza sativa Japonica Group]
Length = 220
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 103/169 (60%), Gaps = 8/169 (4%)
Query: 171 VDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL 230
+ S +++ F +AG V+ ++IY++ TDRSRGF FVTM+T EEA A++MF+ + GR
Sbjct: 1 MTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGRT 60
Query: 231 LTVNKA-APRGTQ-------PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVN 282
VN PRG + R R + F+IY GNL W V L F +++
Sbjct: 61 ARVNYPEVPRGGERAVGSAAATRENRRDDGTFKIYAGNLGWGVRADALRAAFEGQPGLLD 120
Query: 283 ARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
ARV+++R++GRSRGFGFV+ + + A+ ALDG L+GR +R+++AE
Sbjct: 121 ARVIFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSMAE 169
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K++ GNL + V ++ L FE + A VI+ R++ RSRGFGFV+ T E+A+ A+E
Sbjct: 93 KIYAGNLGWGVRADALRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQAALEA 152
Query: 221 FHRYDIDGRLLTVNKA 236
+++GR L ++ A
Sbjct: 153 LDGVELEGRPLRLSMA 168
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 14/206 (6%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
+R+ E+ E ++ + +P LFVGNL ++VD E L FE+ G ++ VI +R+
Sbjct: 230 KRKAEAEPEETSKKTKTEDPAATGNLFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRD 289
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR-----GTQPER------ 245
+ RS+G+G+V + ++A KA+E H Y +D R L V+ PR G P++
Sbjct: 290 SGRSKGYGYVEFESADDAAKALEARHGYTLDNRELRVDLGTPRAQRNDGQTPQQRSNDRQ 349
Query: 246 ---APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 302
+P ++VGN+ ++ + +VF E+G + R+ DRETG +GFG+V
Sbjct: 350 KQYGDTPSQPSATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEF 409
Query: 303 SSETELNDAIAALDGQNLDGRAIRVN 328
SS E A+ L G ++ GR IR++
Sbjct: 410 SSIEEAKSAMENLTGVDIAGRPIRLD 435
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VGNL W VD L + F E G + RV+ DR++GRS+G+G+V S + A+ A
Sbjct: 255 LFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADDAAKALEAR 314
Query: 316 DGQNLDGRAIRVNVAEDRQRRS 337
G LD R +RV++ R +R+
Sbjct: 315 HGYTLDNRELRVDLGTPRAQRN 336
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 12/189 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LF+GNL ++VD E L FE+ G + +I +R++ RS+GFG+V + E+A KA+E
Sbjct: 240 ANLFIGNLSWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFTNAEDAAKALE 299
Query: 220 MFHRYDIDGRLLTVNKAAPR-----GTQPERAPRV-------FEPGFRIYVGNLPWEVDN 267
+ +D R + V+ + PR G Q R EP I+ GNL ++
Sbjct: 300 AKNESLLDNRNIRVDFSTPRDKSNAGPQQRSNDRQQKFGDAPGEPTATIWCGNLSFDATE 359
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+ + F+EHG V + R+ DR+TG +GFG+V M S E A AL GQ++ GR +R+
Sbjct: 360 DVVREYFAEHGNVNSIRLPTDRDTGAPKGFGYVEMGSVEEAQAAFNALQGQDVGGRPVRL 419
Query: 328 NVAEDRQRR 336
+ A+ R R
Sbjct: 420 DYAQPRPPR 428
>gi|45198625|ref|NP_985654.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|44984635|gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|374108884|gb|AEY97790.1| FAFR107Wp [Ashbya gossypii FDAG1]
Length = 396
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 115/211 (54%), Gaps = 16/211 (7%)
Query: 134 EAGERQE-ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVI 192
E +++ ES ++ V ++++ P A +FVG L + VD E L F+ G V A VI
Sbjct: 142 EESKKRSAESEDDAVAKKQKTDGQP--ATIFVGRLSWSVDDEWLKTEFDHIGGVVGARVI 199
Query: 193 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR---- 248
Y R TD+SRG+G+V V AEKAV+ H +IDGR + + + ++P APR
Sbjct: 200 YERGTDKSRGYGYVDFEDVSYAEKAVKEMHGKEIDGRAINCDMST---SKPASAPREDRA 256
Query: 249 ------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 302
+P +++GNL + D L ++FS+HG V++ R+ E+ + +GFG+V
Sbjct: 257 KKYGDTPSQPSDTLFLGNLSFNADRDALFELFSKHGNVISVRIPTHPESNQPKGFGYVQY 316
Query: 303 SSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
S E A+ AL G+ +D R +R++ + R
Sbjct: 317 GSVEEAQAALDALQGEYIDNRPVRIDFSSPR 347
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LF+GNL ++ D + L LF K G V + + E+++ +GFG+V +VEEA+ A++
Sbjct: 270 LFLGNLSFNADRDALFELFSKHGNVISVRIPTHPESNQPKGFGYVQYGSVEEAQAALDAL 329
Query: 222 HRYDIDGRLLTVNKAAPRGTQ 242
ID R + ++ ++PR Q
Sbjct: 330 QGEYIDNRPVRIDFSSPRPPQ 350
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 7/183 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A LFVG L ++VD E L FE+AG V A V+ R T +SRG+G+V S+ AEKA
Sbjct: 179 EPATLFVGRLSWNVDDEWLKREFEEAGGVISARVMIERSTGKSRGYGYVDFSSKAAAEKA 238
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQP---ERAPRVFE----PGFRIYVGNLPWEVDNARL 270
+ +IDGR + ++ + + P +RA + + P +++GNL + + +L
Sbjct: 239 LNELQGKEIDGRPVNLDMSTGKPKTPASNDRAKKFGDVPSAPSDTLFIGNLSFNTERNKL 298
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
++F E+G VV+ R+ +T + +GFG+V SS E +A+ +L+G+ LDGR R++ +
Sbjct: 299 FEIFGEYGTVVSCRLPTHPDTQQPKGFGYVQFSSVEEAQNALNSLNGEYLDGRPCRLDFS 358
Query: 331 EDR 333
R
Sbjct: 359 TPR 361
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 56/92 (60%)
Query: 244 ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 303
E P E ++VG L W VD+ L++ F E G V++ARV+ +R TG+SRG+G+V S
Sbjct: 171 EETPEASEEPATLFVGRLSWNVDDEWLKREFEEAGGVISARVMIERSTGKSRGYGYVDFS 230
Query: 304 SETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
S+ A+ L G+ +DGR + ++++ + +
Sbjct: 231 SKAAAEKALNELQGKEIDGRPVNLDMSTGKPK 262
>gi|115474525|ref|NP_001060859.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|50725630|dbj|BAD33097.1| putative RNA-binding protein RNP-D precursor [Oryza sativa Japonica
Group]
gi|113622828|dbj|BAF22773.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|125559951|gb|EAZ05399.1| hypothetical protein OsI_27607 [Oryza sativa Indica Group]
gi|215704603|dbj|BAG94231.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 319
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 109/210 (51%), Gaps = 12/210 (5%)
Query: 136 GERQEESGEEGVFEEE-EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYN 194
GE E+ EEG E +LFV NLP D + L LF+ GTV E+ +
Sbjct: 109 GESHEDDQEEGSGSGEGRRPRRSRPRELFVCNLPRRCDVDDLYELFKPYGTVLSVEISRD 168
Query: 195 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP-----RGTQPERAP-- 247
ET SRG GFVTM ++ EA A+ +D+DGR + V ++ R P
Sbjct: 169 PETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSDVVSKRRNINMTHTPPV 228
Query: 248 --RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 305
+FE +IYVGN+ W V+ L + FS+ G VV+ R++ DR+ GR R +GF++ +S
Sbjct: 229 KDHIFESPHKIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFASA 288
Query: 306 TELNDAIAALDGQNLDGRAIRVNVA-EDRQ 334
EL A+ LD + GR I V A E+RQ
Sbjct: 289 EELEAAL-KLDNTHFHGRNILVRQAHEERQ 317
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 103/180 (57%), Gaps = 7/180 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A +FVG L + VD E L FE G V A VIY R TDRSRG+G+V S+ AE+A
Sbjct: 176 ETATIFVGRLSWSVDDEWLKNEFEHIGDVIGARVIYERGTDRSRGYGYVDFSSKSAAERA 235
Query: 218 VEMFHRYDIDGRLLTVNKAAPR---GTQPERAPRV----FEPGFRIYVGNLPWEVDNARL 270
V+ H IDGR + + + + G +RA + +P +++GNL + D ++
Sbjct: 236 VKEMHGKQIDGREINCDMSTSKPAGGNGGDRAKKFGDVPSQPSDTLFLGNLSFNADRDQI 295
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
++FS+HG++++ R+ ET + +GFG+V + + A+ AL G+ +D R +R++ +
Sbjct: 296 YELFSKHGEIISVRLPTHPETEQPKGFGYVQYGNVNDAQSALDALQGEYIDNRPVRLDFS 355
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P D LF+GNL ++ D +++ LF K G + + + ET++ +GFG+V V +A+
Sbjct: 277 PSDT-LFLGNLSFNADRDQIYELFSKHGEIISVRLPTHPETEQPKGFGYVQYGNVNDAQS 335
Query: 217 AVEMFHRYDIDGRLLTVNKAAPR 239
A++ ID R + ++ + P+
Sbjct: 336 ALDALQGEYIDNRPVRLDFSTPK 358
>gi|326507732|dbj|BAJ86609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 100
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 68/86 (79%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
F+ ++YVGNL W VDN+ LE +FSE GKV++A+V+YDR++GRSRGFGFVT S E+N
Sbjct: 10 FDSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVN 69
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQR 335
+AI+ LDG +LDGR IRV VAE + R
Sbjct: 70 NAISNLDGVDLDGRQIRVTVAESKPR 95
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+VGNL + VD+ L LF + G V A+VIY+R++ RSRGFGFVT + +E A+
Sbjct: 15 KLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISN 74
Query: 221 FHRYDIDGRLL--TVNKAAPR 239
D+DGR + TV ++ PR
Sbjct: 75 LDGVDLDGRQIRVTVAESKPR 95
>gi|345569038|gb|EGX51907.1| hypothetical protein AOL_s00043g641 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 100/183 (54%), Gaps = 7/183 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E LFVG L ++VD + L FE TVE A V+++ + +RS+G G+V +T +AEKA
Sbjct: 251 ESKTLFVGQLSWNVDEDWLRREFEDVATVENARVVWDNQRNRSKGIGYVDFATRADAEKA 310
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE-------PGFRIYVGNLPWEVDNARL 270
+ +IDGR + ++ R R + P ++VGNL + D L
Sbjct: 311 LAEKQGAEIDGRPINLDFTTARQNNNNSQDRARKFGDSESPPSDTLFVGNLSFNADEEAL 370
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
SEHG+V + R+ D++TG +GF +VT S+ E A AA++GQ + GR+IR + +
Sbjct: 371 GAAMSEHGEVTSVRIPTDKDTGNKKGFAYVTFSTIDEAKKAHAAMNGQQVCGRSIRTDYS 430
Query: 331 EDR 333
+ R
Sbjct: 431 QPR 433
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VG L W VD L + F + V NARVV+D + RS+G G+V ++ + A+A
Sbjct: 255 LFVGQLSWNVDEDWLRREFEDVATVENARVVWDNQRNRSKGIGYVDFATRADAEKALAEK 314
Query: 316 DGQNLDGRAIRVNVAEDRQ 334
G +DGR I ++ RQ
Sbjct: 315 QGAEIDGRPINLDFTTARQ 333
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 124/223 (55%), Gaps = 10/223 (4%)
Query: 121 SDWGEPEGEDTVVEAGE-RQEESGEEGVFEEEEFVEPPEDAK-LFVGNLPYDVDSEKLAM 178
++ +P+ E V + G+ +++ E+G ++ + + D K LFVG L ++VD + L
Sbjct: 360 TEMSDPKPETPVAQNGKNKRKGDTEDGSAKKAKTDDASGDIKNLFVGGLSWNVDDDWLKK 419
Query: 179 LFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 238
FEK G V A VI R T+RS+GFG+V ++ E+A KAVE +IDGR + V+ +AP
Sbjct: 420 EFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVEAMAGTEIDGRTINVDFSAP 479
Query: 239 RGTQPERAPRVF------EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
+ +P + R F P +++GNLP+ + + FSE+G + + R+ D ET
Sbjct: 480 KPERPPQEKRSFGQEELSAPTTTLFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPETE 539
Query: 293 RSRGFGFVTMSSETELNDA--IAALDGQNLDGRAIRVNVAEDR 333
R +GFG+V +++ A + DG +D R R++ ++ R
Sbjct: 540 RIKGFGYVEFATQEAATAAVNVGRGDGIYIDQRQARLDYSQPR 582
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VG L W VD+ L++ F + G+V++ARV+ +R T RS+GFG+V +S + A+ A+
Sbjct: 403 LFVGGLSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVEAM 462
Query: 316 DGQNLDGRAIRVNVAEDRQRR 336
G +DGR I V+ + + R
Sbjct: 463 AGTEIDGRTINVDFSAPKPER 483
>gi|297816490|ref|XP_002876128.1| hypothetical protein ARALYDRAFT_348313 [Arabidopsis lyrata subsp.
lyrata]
gi|297321966|gb|EFH52387.1| hypothetical protein ARALYDRAFT_348313 [Arabidopsis lyrata subsp.
lyrata]
Length = 467
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 107/179 (59%), Gaps = 12/179 (6%)
Query: 149 EEEEFVEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFV 206
E+ ++P +A ++++GN+P V +E+L L E+ G VE +V+Y++ + RSR FGF
Sbjct: 63 EKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFA 122
Query: 207 TMSTVEEAEKAVEMFHRYDIDGRLLTVN-------KAAPRGT--QPERAPRVFEPGFRIY 257
TM +VE+A VE + ++GR + VN ++P + Q E + V P +++Y
Sbjct: 123 TMKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSSPDLSLLQSEDSAFVDSP-YKVY 181
Query: 258 VGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
VGNL V LE +FSE GKVV+A+V T +S GFGFVT SSE ++ AI AL+
Sbjct: 182 VGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAILALN 240
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 241 TQPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 296
T+ E P +P R+Y+GN+P V N +L ++ EHG V +V+YD+ +GRSR
Sbjct: 59 TETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRR 118
Query: 297 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
FGF TM S + N + L+G ++GR I+VN+ E
Sbjct: 119 FGFATMKSVEDANAVVEKLNGNTVEGREIKVNITE 153
>gi|425781065|gb|EKV19047.1| Nucleolin protein Nsr1, putative [Penicillium digitatum PHI26]
Length = 537
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 104/185 (56%), Gaps = 11/185 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LF+GNL ++VD E L F + G + ++ +RET RSRGFG+V ++ +A KA+E
Sbjct: 281 ANLFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAME 340
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR-----------IYVGNLPWEVDNA 268
D+DGR + ++ AAPR + A R + ++VGNLP+
Sbjct: 341 AKKGTDLDGRTINLDYAAPRQANTQGADRSQDRARSYGDQTSPESDTLFVGNLPFSATED 400
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
L +VF G V+ R+ ++ETGR +GFG+V SS E A AAL+G L+GRAIR++
Sbjct: 401 ALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHAALNGHELEGRAIRLD 460
Query: 329 VAEDR 333
+ R
Sbjct: 461 FSTPR 465
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+++GNL W VD L++ FSE G++ R+V DRETGRSRGFG+V +S + A+ A
Sbjct: 283 LFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAMEAK 342
Query: 316 DGQNLDGRAIRVNVAEDRQ 334
G +LDGR I ++ A RQ
Sbjct: 343 KGTDLDGRTINLDYAAPRQ 361
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
PE LFVGNLP+ + L +F G+V + +ET R +GFG+V S+++EA+
Sbjct: 383 PESDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKA 442
Query: 217 AVEMFHRYDIDGRLLTVNKAAPR 239
A + ++++GR + ++ + PR
Sbjct: 443 AHAALNGHELEGRAIRLDFSTPR 465
>gi|389633057|ref|XP_003714181.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|351646514|gb|EHA54374.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|440473688|gb|ELQ42470.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae Y34]
gi|440486239|gb|ELQ66126.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae P131]
Length = 486
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVGNL ++VD LA F+ GTV A VI +RE+ RS+GFG+V +T EEAEKA
Sbjct: 241 LFVGNLSWNVDDAMLAEEFKFCGTVTSARVITDRESGRSKGFGYVDFATPEEAEKAHGEK 300
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF---------RIYVGNLPWEVDNARLEQ 272
IDGR + V+ + + T A + ++VGNLP++ D +
Sbjct: 301 QGAFIDGREIKVDFSTGKATNSNDAAGARAKKYGDTVSPESDTLFVGNLPFDADEDSVGA 360
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
FSE +V + R+ ++E+GR +GFG+VT +S + A L+GQ+++GR R++ +
Sbjct: 361 FFSEVAEVKSLRLPTEQESGRRKGFGYVTFNSVEDAKSAFEQLNGQSINGRNCRLDYSTP 420
Query: 333 RQRR 336
R R
Sbjct: 421 RPPR 424
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 101/179 (56%), Gaps = 8/179 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG L ++VD++ LA F + G V A V +R T +SRGFG+V +T E E A+ +
Sbjct: 299 IFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFATTEAVEAAL-LL 357
Query: 222 HRYDIDGRLLTVNKA--APRGTQPERAPRVF-----EPGFRIYVGNLPWEVDNARLEQVF 274
+ +IDGR + ++K+ +G E+ F EP ++VGNL W+ ++ +VF
Sbjct: 358 NGKEIDGRPVNIDKSEQKDKGAAREKRAEKFGDSASEPSAVLFVGNLSWDCTEDQVWEVF 417
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
EHG V + R+ DRETGR +GFG+V + A L G + GR IR++ ++ R
Sbjct: 418 GEHGDVKSVRLPTDRETGRPKGFGYVEFTDIETAKKAFEGLSGTEVAGRPIRLDYSQPR 476
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
I+VG L W VDN L Q F+E G+V++ARV DR TG+SRGFG+V ++ TE +A L
Sbjct: 299 IFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFAT-TEAVEAALLL 357
Query: 316 DGQNLDGRAIRVNVAEDRQR 335
+G+ +DGR + ++ +E + +
Sbjct: 358 NGKEIDGRPVNIDKSEQKDK 377
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 6/182 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A +FVG L + +D E L FE G V A VIY R TDRSRG+G+V E AEKA
Sbjct: 163 EPATIFVGRLSWSIDDEWLKNEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKEYAEKA 222
Query: 218 VEMFHRYDIDGRLLTVNKAA--PRGTQPERAPRV----FEPGFRIYVGNLPWEVDNARLE 271
V+ H +IDGR + + + P +RA + EP +++GNL + D +
Sbjct: 223 VKEMHGKEIDGREINCDMSTSKPAAGNNDRAKKFGDVPSEPSETLFLGNLSFNADRDNIS 282
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
++FS+ G++V+ R+ ET + +GFG+V ++ + A+ AL G+ +D R +R++ +
Sbjct: 283 EMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKKALDALQGEYIDNRPVRLDFST 342
Query: 332 DR 333
R
Sbjct: 343 PR 344
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP E LF+GNL ++ D + ++ +F K G + + + ET++ +GFG+V + VE+A
Sbjct: 262 EPSE--TLFLGNLSFNADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDA 319
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQ 242
+KA++ ID R + ++ + PR Q
Sbjct: 320 KKALDALQGEYIDNRPVRLDFSTPRPPQ 347
>gi|449515273|ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 6/201 (2%)
Query: 136 GERQEESGEEGVFEE--EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIY 193
G R + +E EE EE + + KL++ NLP+ + + LF + GTV E+I
Sbjct: 68 GARLCSALQEVTLEEASEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEII- 126
Query: 194 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV---NKAAPRGTQPERAPRVF 250
++ RSRGF FVTM++ +EA+ A++ F +I GR++ V + P
Sbjct: 127 KQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPG 186
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
E ++YV NL W+V + L FSE+ + ARVV+D GRS G+GFV+ ++ E
Sbjct: 187 ETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQT 246
Query: 311 AIAALDGQNLDGRAIRVNVAE 331
A+++L+G+ L GR +R+ +E
Sbjct: 247 ALSSLEGKELMGRPLRLKFSE 267
>gi|449462067|ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
sativus]
Length = 282
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 6/201 (2%)
Query: 136 GERQEESGEEGVFEE--EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIY 193
G R + +E EE EE + + KL++ NLP+ + + LF + GTV E+I
Sbjct: 62 GARLCSALQEVTLEEASEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEII- 120
Query: 194 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV---NKAAPRGTQPERAPRVF 250
++ RSRGF FVTM++ +EA+ A++ F +I GR++ V + P
Sbjct: 121 KQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPG 180
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
E ++YV NL W+V + L FSE+ + ARVV+D GRS G+GFV+ ++ E
Sbjct: 181 ETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQT 240
Query: 311 AIAALDGQNLDGRAIRVNVAE 331
A+++L+G+ L GR +R+ +E
Sbjct: 241 ALSSLEGKELMGRPLRLKFSE 261
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 102/188 (54%), Gaps = 11/188 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E + LFVGNL ++VD E L FE G + ++ +R++ RSRGFG+V + E+A KA
Sbjct: 262 ESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKA 321
Query: 218 VEMFHRYDIDGRLLTVNKAAPR----GTQPERAPRVFEPGFR-------IYVGNLPWEVD 266
+ +IDGR + ++ A R G + R G + +++GN+ + D
Sbjct: 322 FKAKKDAEIDGRTINLDFANARQNAGGARDRAQSRAKSFGDQTSPESDTLFIGNISFNAD 381
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
+++ FS HG ++ R+ D E+GR +GFG+V SS E A AL G L GRA+R
Sbjct: 382 ENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSVDEARSAFNALQGTELAGRAMR 441
Query: 327 VNVAEDRQ 334
++ + RQ
Sbjct: 442 LDFSTPRQ 449
>gi|297823333|ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata]
gi|297325388|gb|EFH55808.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 115/205 (56%), Gaps = 11/205 (5%)
Query: 131 TVVEAGERQEESGEEGVFEEEEFVEPPED---AKLFVGNLPYDVDSEKLAMLFEKAGTVE 187
+V+ + +E S EE +EE+ E + KLFV NLP+ + ++ LF + GTV
Sbjct: 63 SVLCSVAEKETSAEEETSQEEKTEETQKSNLKRKLFVFNLPWSMSVNDISELFGQCGTVN 122
Query: 188 IAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGT 241
E+I ++ ++RGF FVTM++ EEA+ A++ F + GR+++VN K P+
Sbjct: 123 NVEIIRQKD-GKNRGFAFVTMASGEEAQAAIDKFDTSQVSGRIISVNFARRFKKPTPKPP 181
Query: 242 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG-KVVNARVVYDRETGRSRGFGFV 300
+P + ++YV NL W+ + L ++F+ V+ARVV+ GRS G+GFV
Sbjct: 182 NDLPSPPPGDTRHKLYVSNLAWKARSTHLRELFTASDFNPVSARVVFADPEGRSSGYGFV 241
Query: 301 TMSSETELNDAIAALDGQNLDGRAI 325
+ ++ E DAIA LDG+ + GR I
Sbjct: 242 SFATREEAEDAIAKLDGKEIMGRPI 266
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++V NLPW + + ++F + G V N ++ ++ G++RGF FVTM+S E AI
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKD-GKNRGFAFVTMASGEEAQAAIDK 154
Query: 315 LDGQNLDGRAIRVNVA 330
D + GR I VN A
Sbjct: 155 FDTSQVSGRIISVNFA 170
>gi|449445537|ref|XP_004140529.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 286
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 10/192 (5%)
Query: 145 EGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFG 204
EG +E + +L+V NLP D +L +F+ GTV AEV N ET S+G G
Sbjct: 87 EGSLSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCG 146
Query: 205 FVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP------ERAPR---VFEPGFR 255
+VTM ++ A+ ++ D+ GR + V A ++ +P+ ++E ++
Sbjct: 147 YVTMGSINSAKVSITALDGSDVGGREMRVRFAVDMNSKKRNLNNLHSSPKKNIIYESPYK 206
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+YVGNL W+V L +FS G VV+A+V+ DR G+SR +GF++ SS E DA +L
Sbjct: 207 VYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RDASISL 265
Query: 316 DGQNLDGRAIRV 327
DG + R + V
Sbjct: 266 DGTEYNNRKLVV 277
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+YV NLP D A L ++F +G V+ A V + ETG S+G G+VTM S +I AL
Sbjct: 104 LYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKVSITAL 163
Query: 316 DGQNLDGRAIRVNVAED 332
DG ++ GR +RV A D
Sbjct: 164 DGSDVGGREMRVRFAVD 180
>gi|449518978|ref|XP_004166512.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 284
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 10/192 (5%)
Query: 145 EGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFG 204
EG +E + +L+V NLP D +L +F+ GTV AEV N ET S+G G
Sbjct: 85 EGSLSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCG 144
Query: 205 FVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP------ERAPR---VFEPGFR 255
+VTM ++ A+ ++ D+ GR + V A ++ +P+ ++E ++
Sbjct: 145 YVTMGSINSAKVSITALDGSDVGGREMRVRFAVDMNSKKRNLNNLHSSPKKNIIYESPYK 204
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+YVGNL W+V L +FS G VV+A+V+ DR G+SR +GF++ SS E DA +L
Sbjct: 205 VYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RDASISL 263
Query: 316 DGQNLDGRAIRV 327
DG + R + V
Sbjct: 264 DGTEYNNRKLVV 275
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+YV NLP D A L ++F +G V+ A V + ETG S+G G+VTM S +I AL
Sbjct: 102 LYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKVSITAL 161
Query: 316 DGQNLDGRAIRVNVAED 332
DG ++ GR +RV A D
Sbjct: 162 DGSDVGGREMRVRFAVD 178
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 102/188 (54%), Gaps = 11/188 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E + LFVGNL ++VD E L FE G + ++ +R++ RSRGFG+V + E+A KA
Sbjct: 260 ESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKA 319
Query: 218 VEMFHRYDIDGRLLTVNKAAPR----GTQPERAPRVFEPGFR-------IYVGNLPWEVD 266
+ +IDGR + ++ A R G + R G + +++GN+ + D
Sbjct: 320 FKAKKDAEIDGRTINLDFANARQNAGGARDRAQSRAKSFGDQTSPESDTLFIGNISFNAD 379
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
+++ FS HG ++ R+ D E+GR +GFG+V SS E A AL G L GRA+R
Sbjct: 380 ENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSVDEARSAFNALQGTELAGRAMR 439
Query: 327 VNVAEDRQ 334
++ + RQ
Sbjct: 440 LDFSTPRQ 447
>gi|255713222|ref|XP_002552893.1| KLTH0D03916p [Lachancea thermotolerans]
gi|238934273|emb|CAR22455.1| KLTH0D03916p [Lachancea thermotolerans CBS 6340]
Length = 505
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 98/185 (52%), Gaps = 7/185 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A +FVG L + VD E L FE G V A VI R TDRSRG+G+V AEKA
Sbjct: 254 EPATIFVGRLSWSVDDEWLKTEFEPIGGVISARVIMERGTDRSRGYGYVDFENKFYAEKA 313
Query: 218 VEMFHRYDIDGRLLTVN--KAAPRGTQPERAPRVF-----EPGFRIYVGNLPWEVDNARL 270
V+ H +IDGR + + + P G + F +P +++GNL + D +
Sbjct: 314 VKEMHGKEIDGRPINCDMSTSKPAGNPRNDRAKQFGDTPSQPSDTLFLGNLSFNADRDNI 373
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ F+EHG+VV+ R+ ET + +GFG+V SS E A AL G +D R +R++ +
Sbjct: 374 FETFAEHGEVVSVRLPTHPETNQPKGFGYVQYSSVDEAQKAFEALQGHYIDNRPVRLDFS 433
Query: 331 EDRQR 335
+ R
Sbjct: 434 TPKPR 438
>gi|254585491|ref|XP_002498313.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
gi|238941207|emb|CAR29380.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
Length = 468
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 14/205 (6%)
Query: 133 VEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVI 192
E E QEES ++ E A +FVG L +++D + L FE G V+ A VI
Sbjct: 216 AEVDEEQEESSKKAKLSGEP-------ATIFVGRLSWNIDDQWLKNEFEHIGGVQSARVI 268
Query: 193 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT---QPERAPRV 249
Y R + RSRG+G+V + AEKAV+ H ++DGR + + + + T + +RA R
Sbjct: 269 YERGSTRSRGYGYVDFTDKSYAEKAVKEMHGKELDGRPINCDMSTSKPTVNPREDRAKRF 328
Query: 250 ----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 305
EP +++GNL + D ++ ++FS HG+V++ R+ ET + +GFG+V +S
Sbjct: 329 GDMPSEPSDTLFLGNLSFNADRDQIYELFSPHGEVISVRIPTHPETEQPKGFGYVQYASV 388
Query: 306 TELNDAIAALDGQNLDGRAIRVNVA 330
A+ L G+ +D R +R++ +
Sbjct: 389 DSAQKALETLQGEYIDNRPVRLDFS 413
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
I+VG L W +D+ L+ F G V +ARV+Y+R + RSRG+G+V + ++ A+ +
Sbjct: 238 IFVGRLSWNIDDQWLKNEFEHIGGVQSARVIYERGSTRSRGYGYVDFTDKSYAEKAVKEM 297
Query: 316 DGQNLDGRAIR---------VNVAEDRQRR 336
G+ LDGR I VN EDR +R
Sbjct: 298 HGKELDGRPINCDMSTSKPTVNPREDRAKR 327
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P D LF+GNL ++ D +++ LF G V + + ET++ +GFG+V ++V+ A+K
Sbjct: 335 PSDT-LFLGNLSFNADRDQIYELFSPHGEVISVRIPTHPETEQPKGFGYVQYASVDSAQK 393
Query: 217 AVEMFHRYDIDGRLLTVNKAAPR 239
A+E ID R + ++ + P+
Sbjct: 394 ALETLQGEYIDNRPVRLDFSTPK 416
>gi|425783198|gb|EKV21057.1| Nucleolin protein Nsr1, putative [Penicillium digitatum Pd1]
Length = 467
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 104/185 (56%), Gaps = 11/185 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LF+GNL ++VD E + F + G + ++ +RET RSRGFG+V ++ +A KA+E
Sbjct: 211 ANLFIGNLSWNVDEEWVQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAME 270
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR-----------IYVGNLPWEVDNA 268
D+DGR + ++ AAPR + A R + ++VGNLP+
Sbjct: 271 AKKGTDLDGRTINLDYAAPRQANTQGADRSQDRARSYGDQTSPESDTLFVGNLPFSATED 330
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
L +VF G V+ R+ ++ETGR +GFG+V SS E A AAL+G L+GRAIR++
Sbjct: 331 ALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHAALNGHELEGRAIRLD 390
Query: 329 VAEDR 333
+ R
Sbjct: 391 FSTPR 395
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+++GNL W VD +++ FSE G++ R+V DRETGRSRGFG+V +S + A+ A
Sbjct: 213 LFIGNLSWNVDEEWVQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAMEAK 272
Query: 316 DGQNLDGRAIRVNVAEDRQ 334
G +LDGR I ++ A RQ
Sbjct: 273 KGTDLDGRTINLDYAAPRQ 291
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
PE LFVGNLP+ + L +F G+V + +ET R +GFG+V S+++EA+
Sbjct: 313 PESDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKA 372
Query: 217 AVEMFHRYDIDGRLLTVNKAAPR 239
A + ++++GR + ++ + PR
Sbjct: 373 AHAALNGHELEGRAIRLDFSTPR 395
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 104/182 (57%), Gaps = 6/182 (3%)
Query: 158 EDAK-LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
ED+K +FVG L ++VD++ LA F G V A V +R T +SRGFGFV +T E A
Sbjct: 318 EDSKTVFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEFATAEGANA 377
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF-----EPGFRIYVGNLPWEVDNARLE 271
AV + + +IDGR + ++K + + PER + F P ++VGN+ +++ L
Sbjct: 378 AVALNGQKEIDGRAVNLDKTSAKPADPERRAKAFGDSTSAPSSVLFVGNVSFDMTEDGLW 437
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+VF+E+G+V + R+ DR+T R +G+G+V A G ++ GR IR++ A+
Sbjct: 438 EVFAEYGEVKSVRLPTDRDTQRLKGYGYVEFVDVESAKKAFEGARGMDVGGRTIRLDYAQ 497
Query: 332 DR 333
R
Sbjct: 498 PR 499
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 99/183 (54%), Gaps = 7/183 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E +FVG L ++VD ++LA F + G V A V +R T +SRGFG V + +KA
Sbjct: 341 ESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGHVEFADASSVQKA 400
Query: 218 VEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRVF-----EPGFRIYVGNLPWEVDNARL 270
++ + +IDGR + V++A + Q E + F P ++VGNL W+ +
Sbjct: 401 IDTMNGKEIDGRPVNVDRAPGLNKNQQRENRAKAFGDSTSAPSSVLFVGNLSWDATEDAV 460
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ F EHG+V + R+ DRE+GR +GFG+V A AL G + GR+IR++ +
Sbjct: 461 WEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFVDVDAAKAAFEALSGTEIGGRSIRLDYS 520
Query: 331 EDR 333
+ R
Sbjct: 521 QPR 523
>gi|4678944|emb|CAB41335.1| putative protein [Arabidopsis thaliana]
Length = 546
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 18/194 (9%)
Query: 149 EEEEFVEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFV 206
E+ ++P +A ++++GN+P V +E+L L E+ G VE +V+Y++ + RSR FGF
Sbjct: 63 EKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVE--KVMYDKYSGRSRRFGFA 120
Query: 207 TMSTVEEAEKAVEMFH-------RYDIDGRLLTVNKA-APRGTQPERA------PRVFEP 252
TM +VE+A VE + ++GR + VN P + P+ + +
Sbjct: 121 TMKSVEDANAVVEKLNGNSLFLVSQTVEGREIKVNITEKPIASSPDLSVLQSEDSAFVDS 180
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
+++YVGNL V LE +FSE GKVV+A+V T +S GFGFVT SSE ++ AI
Sbjct: 181 PYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAI 240
Query: 313 AALDGQNLDGRAIR 326
AL+ L+G+ IR
Sbjct: 241 VALNNSLLEGQKIR 254
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 13/102 (12%)
Query: 241 TQPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 296
T+ E P +P R+Y+GN+P V N +L ++ EHG V +V+YD+ +GRSR
Sbjct: 59 TETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAV--EKVMYDKYSGRSRR 116
Query: 297 FGFVTMSSETELNDAIAALDG-------QNLDGRAIRVNVAE 331
FGF TM S + N + L+G Q ++GR I+VN+ E
Sbjct: 117 FGFATMKSVEDANAVVEKLNGNSLFLVSQTVEGREIKVNITE 158
>gi|259146662|emb|CAY79919.1| Nsr1p [Saccharomyces cerevisiae EC1118]
Length = 414
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 7/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E E A +FVG L + +D E L FE G V A VIY R TDRSRG+G+V A
Sbjct: 163 ETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYA 222
Query: 215 EKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERAPRV----FEPGFRIYVGNLPWEVDNA 268
EKA++ +IDGR + + + P G +RA + EP +++GNL + D
Sbjct: 223 EKAIQEMQGKEIDGRPINCDMSTSKPAGNN-DRAKKFGDTPSEPSDTLFLGNLSFNADRD 281
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ ++F++HG+VV+ R+ ET + +GFG+V S+ + A+ AL G+ +D R +R++
Sbjct: 282 AIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLD 341
Query: 329 VAEDR 333
+ R
Sbjct: 342 FSSPR 346
>gi|190406825|gb|EDV10092.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae RM11-1a]
gi|207345058|gb|EDZ72003.1| YGR159Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272028|gb|EEU07041.1| Nsr1p [Saccharomyces cerevisiae JAY291]
gi|323354844|gb|EGA86677.1| Nsr1p [Saccharomyces cerevisiae VL3]
gi|365765431|gb|EHN06939.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 7/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E E A +FVG L + +D E L FE G V A VIY R TDRSRG+G+V A
Sbjct: 165 ETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYA 224
Query: 215 EKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERAPRV----FEPGFRIYVGNLPWEVDNA 268
EKA++ +IDGR + + + P G +RA + EP +++GNL + D
Sbjct: 225 EKAIQEMQGKEIDGRPINCDMSTSKPAGNN-DRAKKFGDTPSEPSDTLFLGNLSFNADRD 283
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ ++F++HG+VV+ R+ ET + +GFG+V S+ + A+ AL G+ +D R +R++
Sbjct: 284 AIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLD 343
Query: 329 VAEDR 333
+ R
Sbjct: 344 FSSPR 348
>gi|151943436|gb|EDN61747.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae YJM789]
Length = 418
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 7/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E E A +FVG L + +D E L FE G V A VIY R TDRSRG+G+V A
Sbjct: 167 ETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYA 226
Query: 215 EKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERAPRV----FEPGFRIYVGNLPWEVDNA 268
EKA++ +IDGR + + + P G +RA + EP +++GNL + D
Sbjct: 227 EKAIQEMQGKEIDGRPINCDMSTSKPAGNN-DRAKKFGDTPSEPSDTLFLGNLSFNADRD 285
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ ++F++HG+VV+ R+ ET + +GFG+V S+ + A+ AL G+ +D R +R++
Sbjct: 286 AIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLD 345
Query: 329 VAEDR 333
+ R
Sbjct: 346 FSSPR 350
>gi|349578366|dbj|GAA23532.1| K7_Nsr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 416
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 7/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E E A +FVG L + +D E L FE G V A VIY R TDRSRG+G+V A
Sbjct: 165 ETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYA 224
Query: 215 EKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERAPRV----FEPGFRIYVGNLPWEVDNA 268
EKA++ +IDGR + + + P G +RA + EP +++GNL + D
Sbjct: 225 EKAIQEMQGKEIDGRPINCDMSTSKPAGNN-DRAKKFGDTPSEPSDTLFLGNLSFNADRD 283
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ ++F++HG+VV+ R+ ET + +GFG+V S+ + A+ AL G+ +D R +R++
Sbjct: 284 AIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLD 343
Query: 329 VAEDR 333
+ R
Sbjct: 344 FSSPR 348
>gi|6321599|ref|NP_011675.1| Nsr1p [Saccharomyces cerevisiae S288c]
gi|128576|sp|P27476.1|NSR1_YEAST RecName: Full=Nuclear localization sequence-binding protein;
AltName: Full=p67
gi|4058|emb|CAA40472.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae]
gi|1045265|emb|CAA59817.1| NSR1 [Saccharomyces cerevisiae]
gi|1323271|emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae]
gi|285812350|tpg|DAA08250.1| TPA: Nsr1p [Saccharomyces cerevisiae S288c]
gi|392299413|gb|EIW10507.1| Nsr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 414
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 7/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E E A +FVG L + +D E L FE G V A VIY R TDRSRG+G+V A
Sbjct: 163 ETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYA 222
Query: 215 EKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERAPRV----FEPGFRIYVGNLPWEVDNA 268
EKA++ +IDGR + + + P G +RA + EP +++GNL + D
Sbjct: 223 EKAIQEMQGKEIDGRPINCDMSTSKPAGNN-DRAKKFGDTPSEPSDTLFLGNLSFNADRD 281
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ ++F++HG+VV+ R+ ET + +GFG+V S+ + A+ AL G+ +D R +R++
Sbjct: 282 AIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLD 341
Query: 329 VAEDR 333
+ R
Sbjct: 342 FSSPR 346
>gi|356531425|ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 111/190 (58%), Gaps = 10/190 (5%)
Query: 151 EEFVEP--PED--AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFV 206
E+ +EP P D KL+V NL + + + + LF + GTV E+I +++ RS+G+ FV
Sbjct: 60 EQTLEPIQPTDNVKKLYVVNLSWSLTAADITDLFAQCGTVTDVEIIKSKD-GRSKGYAFV 118
Query: 207 TMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA----PRGTQPERAPRVFEPGFRIYVGNLP 262
TM++ EEA+ AV+ F Y++ GR++ V A P P PR E IY NL
Sbjct: 119 TMASGEEAQAAVDKFDSYELSGRIIRVELAKRLKKPPSLPPPPGPRPGETRHVIYASNLA 178
Query: 263 WEVDNARLEQVFSEHGKV-VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLD 321
W+ + L QVF+E+ K +ARVV+D +GRS G+GFV+ + + AI+ +DG+ L
Sbjct: 179 WKARSTHLRQVFTENFKTPSSARVVFDSPSGRSAGYGFVSFLTREDAEAAISTVDGKELM 238
Query: 322 GRAIRVNVAE 331
GR +R+ +E
Sbjct: 239 GRPLRLKFSE 248
>gi|361126769|gb|EHK98755.1| putative Nuclear localization sequence-binding protein [Glarea
lozoyensis 74030]
Length = 525
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 99/182 (54%), Gaps = 10/182 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVGNL +++D E L FE+ G + A V+ +RE+ RS+GFG+V S+ A A+
Sbjct: 269 LFVGNLSWNIDDEWLYREFEEFGEITRANVLTDRESGRSKGFGYVEFSSSAAAAAALAAK 328
Query: 222 HRYDIDGRLLTVNKAAPR-----GTQPERAPRVF-----EPGFRIYVGNLPWEVDNARLE 271
IDGR V+ + PR G + + + F P ++VGNL +EVD +
Sbjct: 329 KGALIDGREANVDFSTPRTNDAPGARADNRAKQFGDSQNPPSDTLFVGNLSFEVDQDAVG 388
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ F EHG VVN R+ D ++G +GFG+VT S E A A+ GQ + GR R++ A
Sbjct: 389 EAFGEHGTVVNVRLPTDMDSGNPKGFGYVTFESIDEAKTAYEAMKGQEIAGRPCRLDYAT 448
Query: 332 DR 333
R
Sbjct: 449 PR 450
>gi|363814334|ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycine max]
gi|255639879|gb|ACU20232.1| unknown [Glycine max]
Length = 289
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 114/193 (59%), Gaps = 7/193 (3%)
Query: 149 EEEEFVEPPEDAK-LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVT 207
E E +P ++ K L+V NL + + + + LF ++GTV E+I +++ RS+G+ FVT
Sbjct: 68 ETPELTQPTDNVKKLYVVNLSWSLTAADINDLFAQSGTVTDVEIIKSKD-GRSKGYAFVT 126
Query: 208 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAA----PRGTQPERAPRVFEPGFRIYVGNLPW 263
M++ EEA+ AV+ F Y++ GR++ V A P P PR E IY NL W
Sbjct: 127 MASGEEAQAAVDKFDSYELSGRIIRVELAKRFKKPPSPPPPPGPRPGETRHVIYASNLAW 186
Query: 264 EVDNARLEQVFSEHGKV-VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+ + L Q+F+E+ K +ARVV+D +GRS G+GFV+ ++ + AI+ +DG+ L G
Sbjct: 187 KARSTHLRQLFAENFKTPSSARVVFDSPSGRSAGYGFVSFLTKEDAEAAISTVDGKELMG 246
Query: 323 RAIRVNVAEDRQR 335
R +R+ +E + +
Sbjct: 247 RPLRLKFSEKKDK 259
>gi|50409715|ref|XP_456900.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
gi|49652564|emb|CAG84877.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
Length = 447
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A LFVG L + +D E L FE G V A VI R T +SRG+G+V + AEKA
Sbjct: 196 EPATLFVGRLSWSIDDEWLRREFEPVGGVISARVIMERSTGKSRGYGYVDFDSKSAAEKA 255
Query: 218 VEMFHRYDIDGRLLTVNKAA--PRGTQP--ERAPRVFE----PGFRIYVGNLPWEVDNAR 269
++ + ++DGR + ++ + P + P +RA + + P ++VGNL + +
Sbjct: 256 LQEYQGKELDGRPINLDMSTGKPHASNPNTDRAKQFGDVPSAPSDTLFVGNLSFNAERDS 315
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L F E+G VV+ R+ +T + +GFG+V SS E A+ AL+G+ LDGRA R++
Sbjct: 316 LFNTFGEYGTVVSCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYLDGRACRLDF 375
Query: 330 AEDR 333
+ R
Sbjct: 376 STPR 379
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 52/86 (60%)
Query: 245 RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 304
+ P+ E ++VG L W +D+ L + F G V++ARV+ +R TG+SRG+G+V S
Sbjct: 189 KKPKTNEEPATLFVGRLSWSIDDEWLRREFEPVGGVISARVIMERSTGKSRGYGYVDFDS 248
Query: 305 ETELNDAIAALDGQNLDGRAIRVNVA 330
++ A+ G+ LDGR I ++++
Sbjct: 249 KSAAEKALQEYQGKELDGRPINLDMS 274
>gi|297843010|ref|XP_002889386.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335228|gb|EFH65645.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 298
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRS 200
E+ + V E E V+ P +L+V N+P D +L +F+ GTV EV N +T S
Sbjct: 94 ETNGDSVVSEAEPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGES 153
Query: 201 RGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV----------F 250
RG G+VTM ++ A+ A+ ++ GR + V + R P V +
Sbjct: 154 RGSGYVTMGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGARRNPEVLNSTPKKILMY 213
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
E +++YVGNLPW L FS+ G +V+ RV++DR+TG++R F F++ ++ E D
Sbjct: 214 ESQYKVYVGNLPWFTQPDGLRDHFSKFGTIVSTRVLHDRKTGKNRVFAFLSFTNSEE-RD 272
Query: 311 AIAALDGQNLDGRAIRV 327
A +L+G +GR I V
Sbjct: 273 AALSLNGTQYEGRRIIV 289
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 242 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 301
+P + PR E +YV N+P D A+L +F G V++ V + +TG SRG G+VT
Sbjct: 105 EPVKKPRPCE----LYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVT 160
Query: 302 MSSETELNDAIAALDGQNLDGRAIRVNVAED 332
M S AIA+LDG + GR +RV + D
Sbjct: 161 MGSINSAKIAIASLDGTEVGGREMRVRYSVD 191
>gi|253181|gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevisiae, Peptide, 249 aa]
Length = 249
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 7/182 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A +FVG L + +D E L FE G V A VIY R TDRSRG+G+V AEKA
Sbjct: 1 EPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKA 60
Query: 218 VEMFHRYDIDGRLLTVNKAA--PRGTQPERAPRV----FEPGFRIYVGNLPWEVDNARLE 271
++ +IDGR + + + P G +RA + EP +++GNL + D +
Sbjct: 61 IQEMQGKEIDGRPINCDMSTSKPAGNN-DRAKKFGDTPSEPSDTLFLGNLSFNADRDAIF 119
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
++F++HG+VV+ R+ ET + +GFG+V S+ + A+ AL G+ +D R +R++ +
Sbjct: 120 ELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSS 179
Query: 332 DR 333
R
Sbjct: 180 PR 181
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 99/180 (55%), Gaps = 7/180 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A +FVG L + +D E L FE G V A V+Y R TDRSRG+G+V AEKA
Sbjct: 174 EPATVFVGRLSWSIDDEWLKQEFEHIGGVVAARVMYERGTDRSRGYGYVDFEDKSYAEKA 233
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPR-------VFEPGFRIYVGNLPWEVDNARL 270
V+ H +IDGR + V+ + + T R R EP +++GNL + D +
Sbjct: 234 VKEMHGKEIDGRPINVDMSTSKPTVNPREDRQKRFGDIPSEPSDTLFLGNLSFNADRDNI 293
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
++F + G++++ R+ ET + +GFG+V +S + A+ AL G+ +D R +R++ +
Sbjct: 294 YEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTSIDDAKKALEALQGEYIDNRPVRLDYS 353
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 10/105 (9%)
Query: 241 TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 300
+ P++A EP ++VG L W +D+ L+Q F G VV ARV+Y+R T RSRG+G+V
Sbjct: 164 SSPKKAKTDGEPA-TVFVGRLSWSIDDEWLKQEFEHIGGVVAARVMYERGTDRSRGYGYV 222
Query: 301 TMSSETELNDAIAALDGQNLDGRAIRVNVA---------EDRQRR 336
++ A+ + G+ +DGR I V+++ EDRQ+R
Sbjct: 223 DFEDKSYAEKAVKEMHGKEIDGRPINVDMSTSKPTVNPREDRQKR 267
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 48/78 (61%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LF+GNL ++ D + + +F K G + + + ET++ +GFG+V +++++A+KA+E
Sbjct: 279 LFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTSIDDAKKALEAL 338
Query: 222 HRYDIDGRLLTVNKAAPR 239
ID R + ++ + P+
Sbjct: 339 QGEYIDNRPVRLDYSTPK 356
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 10/208 (4%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
+R+ E EE ++ VE E LFVGNL ++VD E L FE+ G + ++ +R+
Sbjct: 236 KRKAEDDEELAAPKKTKVESSEGGNLFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRD 295
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGTQPERAPRVF 250
+ RSRGFG+V +A KA ++DGR L ++ AAPR RA
Sbjct: 296 SGRSRGFGYVEFVDAADAAKAHAAKKDVELDGRKLNIDFANARSNAAPRERAQSRAQNFG 355
Query: 251 EPGF----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
+ +++GN+ + D + + FSEHG ++ R+ D E+GR +GFG+V SS
Sbjct: 356 DQASPESDTLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVD 415
Query: 307 ELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
E A L+G +L GR +R++ + RQ
Sbjct: 416 EARSAFQTLNGADLGGRPMRLDFSTPRQ 443
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 10/208 (4%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
+R+ E EE ++ VE E LFVGNL ++VD E L FE+ G + ++ +R+
Sbjct: 238 KRKAEDDEELAAPKKTKVESSEGGNLFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRD 297
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGTQPERAPRVF 250
+ RSRGFG+V +A KA ++DGR L ++ AAPR RA
Sbjct: 298 SGRSRGFGYVEFVNAADAAKAHAAKKDVELDGRKLNIDFANARSNAAPRERAQSRAQNFG 357
Query: 251 EPGF----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
+ +++GN+ + D + + FSEHG ++ R+ D E+GR +GFG+V SS
Sbjct: 358 DQASPESDTLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVD 417
Query: 307 ELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
E A L+G +L GR +R++ + RQ
Sbjct: 418 EARSAFQTLNGADLGGRPMRLDFSTPRQ 445
>gi|50305507|ref|XP_452713.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641846|emb|CAH01564.1| KLLA0C11495p [Kluyveromyces lactis]
Length = 445
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 101/187 (54%), Gaps = 13/187 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A +FVG L + +D E L FE G V A V+Y R TDRSRG+G+V AEKA
Sbjct: 194 EPATIFVGRLSWSIDDEWLKTEFEPIGGVISARVMYERGTDRSRGYGYVDFEDKSYAEKA 253
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPR----------VFEPGFRIYVGNLPWEVDN 267
++ H +IDGR + + + ++P APR EP +++GNL +E D
Sbjct: 254 IKEMHGKEIDGRPINCDMST---SKPAGAPRDDRAKKFGDVPSEPSDTLFLGNLSFEADR 310
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L ++F ++G++V+ R+ ET + +GFG+V S + A L G+ ++ R +R+
Sbjct: 311 DNLYEIFGKYGEIVSVRIPTHPETEQPKGFGYVQYGSIEDATKAFEGLQGEYINNRPVRL 370
Query: 328 NVAEDRQ 334
+ + +Q
Sbjct: 371 DYSIPKQ 377
>gi|388521331|gb|AFK48727.1| unknown [Lotus japonicus]
Length = 285
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 106/179 (59%), Gaps = 5/179 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+V NLP+ + + + LF + GTV E+I ++ R +G+ FVTM++ EEA+ AV+
Sbjct: 87 KLYVFNLPWSMSAADIKDLFGQCGTVTDVEIIRGKD-GRGKGYAFVTMASGEEAQAAVDK 145
Query: 221 FHRYDIDGRLLTVNKAA---PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
F ++ GR+L V A +P E IY NL W+V + L + F+E+
Sbjct: 146 FDTLELSGRILRVELAKRFKKPSPPGPPSPPPSEARHVIYASNLAWKVRSTHLREFFTEN 205
Query: 278 GKV-VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
K ++AR+V+D +G++ G+GF++ ++ E AI+ALDG+ L GR++ + ++E + +
Sbjct: 206 FKAPLSARIVFDTPSGKTTGYGFISYLTKEEAEAAISALDGKELMGRSLFLKISEKKVK 264
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 9/181 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVG L + +D E L FE G V A V+ R T RSRG+G+V AEKA+E
Sbjct: 128 LFVGRLSWSIDDEWLKKEFEHIGGVVGARVMMERATGRSRGYGYVDFDNKASAEKALEEM 187
Query: 222 HRYDIDGRLLTVNK-----AAPRGTQPERAPRVFE----PGFRIYVGNLPWEVDNARLEQ 272
+IDGR + V+ AAP +RA + + P +++GNL ++ D L +
Sbjct: 188 QGKEIDGRPINVDMSNSKPAAPAARNNDRASQYGDKRSPPSDTLFLGNLSFQADRDTLFE 247
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
+FS+HG V + R+ ET + +GFG+V SS E A+ AL+G+ +D R IR++ +
Sbjct: 248 LFSKHGNVTSVRIPTHPETEQPKGFGYVQFSSVDEATGALEALNGEYVDNRPIRLDYSTP 307
Query: 333 R 333
R
Sbjct: 308 R 308
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 110/199 (55%), Gaps = 18/199 (9%)
Query: 150 EEEFVEPPEDAK----------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDR 199
E E VEP + A+ +FVG L ++VD+ L F + G + A V +R T R
Sbjct: 19 EGEAVEPAQKARVDDGSAPTKTIFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNTGR 78
Query: 200 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP--ERAPRVF-----EP 252
SRGFGFVT ++ E +KA+E+ + +IDGR + V+K+ + ER R F EP
Sbjct: 79 SRGFGFVTFASPEAVDKALELNGK-EIDGRSINVDKSVEKDQNQVRERRARTFGDAPSEP 137
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
R++VGNL ++ +L +VFS++G + + + R++GR +GFG+V A
Sbjct: 138 SSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFEDIESAKKAH 197
Query: 313 AALDGQNLDGRAIRVNVAE 331
+L GQ + GRAIR+ ++
Sbjct: 198 ESLVGQEIAGRAIRLEFSQ 216
>gi|320583460|gb|EFW97673.1| nuclear localization sequence binding protein [Ogataea
parapolymorpha DL-1]
Length = 500
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 11/190 (5%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
+P E A LFVG L + VD ++L F+ V A V+ RET RSRG+G+V + E+A
Sbjct: 255 KPKEVATLFVGRLAWAVDDQRLLEEFQSLDGVLSARVMTERETGRSRGYGYVDFESKEQA 314
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQP-------ERAPRV----FEPGFRIYVGNLPW 263
+KA+E F +I+GR + ++ + + P +RA + +P ++VGNL +
Sbjct: 315 QKALEQFQGREIEGRPINLDMSTSKPQTPSQNQKFQDRAKKYGDTPSQPSDTLFVGNLSF 374
Query: 264 EVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGR 323
+ D L++ F +HG V+ R+ E+ + +GFG+V S E A+ AL+G+ + GR
Sbjct: 375 QADRDTLKEFFEQHGTVLGIRIPTHPESEQPKGFGYVQFGSVDEAKAALEALNGEYIAGR 434
Query: 324 AIRVNVAEDR 333
+R++ + R
Sbjct: 435 PVRLDFSAPR 444
>gi|406867984|gb|EKD21021.1| hypothetical protein MBM_00134 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 544
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 100/186 (53%), Gaps = 10/186 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVGNL ++VD E L FE+ G + A VI +RE+ RS+GFG+V ++ A A++
Sbjct: 298 LFVGNLSWNVDDEWLMREFEEFGEISGARVISDRESGRSKGFGYVEFTSSASAAAALKAK 357
Query: 222 HRYDIDGRLLTVNKAAPRGTQPER----------APRVFEPGFRIYVGNLPWEVDNARLE 271
IDGR V+ + PR P + P +++GNL ++ D +
Sbjct: 358 KGSLIDGREANVDFSTPRSDAPPKDRAQGRAAAFGDSTNPPSDTLFLGNLSFDADENTVG 417
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ F EHG VVN R+ D+ETG +GFG+VT SS + A A+ G + GR +R++ A
Sbjct: 418 EAFGEHGTVVNVRLPTDQETGNPKGFGYVTFSSIDDAKTAFEAMTGAEIAGRPVRLDYAT 477
Query: 332 DRQRRS 337
+ RS
Sbjct: 478 PKPDRS 483
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
PP D LF+GNL +D D + F + GTV + ++ET +GFG+VT S++++A+
Sbjct: 397 PPSDT-LFLGNLSFDADENTVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFSSIDDAK 455
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 246
A E +I GR + ++ A P+ P+R+
Sbjct: 456 TAFEAMTGAEIAGRPVRLDYATPK---PDRS 483
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 21/187 (11%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++VG L ++VDSE L FE G + A VI +R+T +S+GFG++ T E A+KA+E
Sbjct: 360 VYVGGLSWNVDSEWLKSEFESCGPIVDARVITDRDTQKSKGFGYIDFETCEGAQKAIETK 419
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR----------IYVGNLPWEVDNARLE 271
+ ++DGR L V+ +APR ERAP + F ++VGNLP+ +
Sbjct: 420 NGTELDGRTLKVDLSAPRA---ERAPAENKRDFSKEELSAESTTLFVGNLPFSATQDSVW 476
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL-----DGQNLDGRAIR 326
++F+E+G V + R+ D ET R +GFG+V ++ L A AA+ +G +D R R
Sbjct: 477 EIFAEYGDVNSVRLPTDPETQRVKGFGYVEFAT---LESARAAVEKGRGEGVYIDNRQAR 533
Query: 327 VNVAEDR 333
++ ++ R
Sbjct: 534 LDFSQPR 540
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 243 PERAPRVFEPGFR-IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 301
P++A + E G + +YVG L W VD+ L+ F G +V+ARV+ DR+T +S+GFG++
Sbjct: 347 PKKA-KAAEEGIKNVYVGGLSWNVDSEWLKSEFESCGPIVDARVITDRDTQKSKGFGYID 405
Query: 302 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+ AI +G LDGR ++V+++ R R+
Sbjct: 406 FETCEGAQKAIETKNGTELDGRTLKVDLSAPRAERA 441
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VG L ++VD++ L FE+ GTV A V +R++ RSRGFG+V +T EA +A +
Sbjct: 396 LWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRASKEA 455
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE-------PGFRIYVGNLPWEVDNARLEQVF 274
H ++DGR L V+ RG Q R P +++G L W + + F
Sbjct: 456 HGKELDGRALRVDLQPARGPQDRAESRAKHFKDERSAPSNTLFIGGLAWALTEDDIWNAF 515
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+E G+V R+ + ++GR +GFG+V S+ A+ ++GQ L GR IR++ A R
Sbjct: 516 AEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKALETMNGQALGGRPIRIDFAGKR 574
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 107/185 (57%), Gaps = 8/185 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A LFVG L +++D E L FE G V A VIY + + +SRG+G+V T +A+ A
Sbjct: 289 EPATLFVGRLSWNIDDEWLQREFEPLGGVTGARVIYEKASGKSRGYGYVDFETKSQAQHA 348
Query: 218 VEMFHRYDIDGRL--LTVNKAAPRGTQP--ERAPRVFE----PGFRIYVGNLPWEVDNAR 269
++ + +IDGR L ++++ PR + P +RA + + P +++GNL +
Sbjct: 349 LKEYQGREIDGRPINLDMSESKPRPSNPRFDRAKQFGDVPSAPSSTLFIGNLSFNAQRDN 408
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L +F E+G+VV+ R+ +T + +GFG++ S+ E A+ AL+G+ ++GR R++
Sbjct: 409 LYDIFGEYGRVVSCRMPTHPDTQQPKGFGYIEFSTVDEAKAALEALNGEYVEGRPCRLDF 468
Query: 330 AEDRQ 334
+ R+
Sbjct: 469 STPRE 473
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 54/83 (65%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VG L W +D+ L++ F G V ARV+Y++ +G+SRG+G+V ++++ A+
Sbjct: 293 LFVGRLSWNIDDEWLQREFEPLGGVTGARVIYEKASGKSRGYGYVDFETKSQAQHALKEY 352
Query: 316 DGQNLDGRAIRVNVAEDRQRRSS 338
G+ +DGR I ++++E + R S+
Sbjct: 353 QGREIDGRPINLDMSESKPRPSN 375
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LF+GNL ++ + L +F + G V + + +T + +GFG++ STV+EA+ A+E
Sbjct: 395 LFIGNLSFNAQRDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGYIEFSTVDEAKAALEAL 454
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPR 248
+ ++GR ++ + PR +PR
Sbjct: 455 NGEYVEGRPCRLDFSTPRENSNRPSPR 481
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 99/181 (54%), Gaps = 5/181 (2%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A +FVG L + +D E L FE G V A VIY R TDRSRG+G+V AEKA
Sbjct: 169 EPATIFVGRLSWSIDDEWLKKEFEHIGGVVGARVIYERGTDRSRGYGYVDFEDKSYAEKA 228
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF-----EPGFRIYVGNLPWEVDNARLEQ 272
++ +IDGR + V+ + + + F EP +++GNL + D + +
Sbjct: 229 IQEMQGKEIDGRPINVDMSTSKPAGGNDRAKKFGDVPSEPSDTLFLGNLSFNADKDNIYE 288
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
FS++G++++ R+ ET + +GFG+V S+ + A+ L G+ +D RA+R++ +
Sbjct: 289 TFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKKALEGLQGEYIDNRAVRLDYSTP 348
Query: 333 R 333
R
Sbjct: 349 R 349
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P D LF+GNL ++ D + + F K G + + + ET++ +GFG+V S +E+A+K
Sbjct: 268 PSDT-LFLGNLSFNADKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKK 326
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPE 244
A+E ID R + ++ + PR PE
Sbjct: 327 ALEGLQGEYIDNRAVRLDYSTPRPANPE 354
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 12/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LF+GNL ++VD E L FE+ G ++ +I +R++ RS+GFG+V E+A KA+E
Sbjct: 247 LFIGNLSWNVDEEWLTREFEEFGELKGVRIITDRDSGRSKGFGYVEFENAEDAAKALEAK 306
Query: 222 HRYDIDGRLLTVNKAAPRGTQPER------------APRVFEPGFRIYVGNLPWEVDNAR 269
+ ++D R + ++ + PR + + EP ++VGNL ++
Sbjct: 307 NGAELDNRAIRLDFSVPRQNNAQNPQQRGQERRQQYGDKASEPSQTLFVGNLSFDATEDM 366
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
+ + F EHG + R+ DRE+G +GFG+V M S E A AL G +L GR +R++
Sbjct: 367 VREYFEEHGSINGIRLPTDRESGAPKGFGYVEMGSIDEAKAAYEALQGADLGGRPMRLDY 426
Query: 330 AEDRQRR 336
+ R R
Sbjct: 427 STPRPPR 433
>gi|302850790|ref|XP_002956921.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
gi|300257802|gb|EFJ42046.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
Length = 444
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 93/178 (52%), Gaps = 4/178 (2%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ AK+F+G L ++ EKL FE G+V A V YNR R RGFGFV + E A+K
Sbjct: 5 QSAKVFIGGLSWETTGEKLRAYFENFGSVREAFVSYNRNNGRPRGFGFVVFESPEVADKV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--GFRIYVGNLPWEVDNARLEQVFS 275
V H ID R + KA P+ PE + P +I+VG L VD A+L Q FS
Sbjct: 65 VATKH--TIDRREVEAKKAVPKEETPEEKQQGSAPQRTKKIFVGGLAPSVDEAQLRQHFS 122
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+ G V +A V+YD E R RGFGFVT + E ++ + Q + + I V A R
Sbjct: 123 QFGTVEDAVVMYDHENKRPRGFGFVTFAEEDAVDRVFSHGAVQTIADKPIEVKAAVPR 180
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
E+++ P K+FVG L VD +L F + GTVE A V+Y+ E R RGFGFVT
Sbjct: 90 EKQQGSAPQRTKKIFVGGLAPSVDEAQLRQHFSQFGTVEDAVVMYDHENKRPRGFGFVTF 149
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 243
+ + ++ I + + V A PR P
Sbjct: 150 AEEDAVDRVFSHGAVQTIADKPIEVKAAVPRDQMP 184
>gi|15226983|ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|3608147|gb|AAC36180.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|14596023|gb|AAK68739.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|23198314|gb|AAN15684.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 308
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 100/172 (58%), Gaps = 8/172 (4%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLFV NLP+ + ++ LF + GTV E+I ++ ++RGF FVTM++ EEA+ A++
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKD-GKNRGFAFVTMASGEEAQAAIDK 154
Query: 221 FHRYDIDGRLLTVN------KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
F + + GR+++V+ K P+ +P + ++YV NL W+ + L ++F
Sbjct: 155 FDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPAPGDTRHKLYVSNLAWKARSTHLRELF 214
Query: 275 SEHG-KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
+ V+ARVV+ GRS G+GFV+ ++ E +AI L+G+ + GR I
Sbjct: 215 TAADFNPVSARVVFADPEGRSSGYGFVSFATREEAENAITKLNGKEIMGRPI 266
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++V NLPW + + ++F + G V N ++ ++ G++RGF FVTM+S E AI
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKD-GKNRGFAFVTMASGEEAQAAIDK 154
Query: 315 LDGQNLDGRAIRVNVA 330
D + GR I V+ A
Sbjct: 155 FDTFQVSGRIISVSFA 170
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KL+V NL + S L LF A + A V++ RS G+GFV+ +T EEAE A+
Sbjct: 195 KLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAENAIT 254
Query: 220 MFHRYDIDGRLLTV 233
+ +I GR +T+
Sbjct: 255 KLNGKEIMGRPITL 268
>gi|15223293|ref|NP_171616.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930401|gb|AAL31886.1|AF419554_1 At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|21554268|gb|AAM63343.1| ribonucleoprotein, putative [Arabidopsis thaliana]
gi|22135777|gb|AAM91045.1| At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|332189110|gb|AEE27231.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 293
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRS 200
E ++ V + E V+ P +L+V N+P D +L +F+ GTV EV N +T S
Sbjct: 89 EPNKDSVVSKAEPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGES 148
Query: 201 RGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV----------F 250
RG G+VTM ++ A+ A+ ++ GR + V + R P V +
Sbjct: 149 RGSGYVTMGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGTRRNPEVLNSTPKKILMY 208
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
E ++YVGNLPW L FS+ G +V+ RV++DR+TGR+R F F++ +S E D
Sbjct: 209 ESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTSGEE-RD 267
Query: 311 AIAALDGQNLDGRAIRV 327
A + +G +GR I V
Sbjct: 268 AALSFNGTQYEGRRIIV 284
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 242 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 301
+P + PR E +YV N+P D A+L +F G V++ V + +TG SRG G+VT
Sbjct: 100 EPVKKPRPCE----LYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVT 155
Query: 302 MSSETELNDAIAALDGQNLDGRAIRVNVAED 332
M S AIA+LDG + GR +RV + D
Sbjct: 156 MGSINSAKIAIASLDGTEVGGREMRVRYSVD 186
>gi|401842356|gb|EJT44580.1| NSR1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 393
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 100/186 (53%), Gaps = 7/186 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E E A +FVG L + +D E L FE G V A VI R TDRSRG+G+V A
Sbjct: 136 ESGEPATIFVGRLSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYA 195
Query: 215 EKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERAPRVF-----EPGFRIYVGNLPWEVDN 267
EKA++ +IDGR + + + P G + F EP +++GNL + D
Sbjct: 196 EKAIQEMQGKEIDGRPINCDLSTSKPAGNNTNDRAKKFGDTPSEPSDTLFLGNLSFNADR 255
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+ ++F++HG+VV+ R+ ET + +GFG+V SS + A+ +L G+ +D R +R+
Sbjct: 256 DTIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKALESLQGEYIDNRPVRL 315
Query: 328 NVAEDR 333
+ + R
Sbjct: 316 DYSSPR 321
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 101/179 (56%), Gaps = 9/179 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG L ++VD++ LA F G +E A V +R T +SRGFG+V +TVE A+KA+E+
Sbjct: 329 VFVGQLSWNVDNDWLASEFASCGEIESATVQMDRNTGKSRGFGYVHFTTVEAAQKALELN 388
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRV-------FEPGFRIYVGNLPWEVDNARLEQVF 274
+ +ID R + V+ + PR R R P ++VGNL + + +F
Sbjct: 389 GK-EIDNRPIKVDISTPRNPDAARQKRAQTFGDVTSPPSNTLFVGNLSFNTSEDSVWSLF 447
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+++G V + R+ DRE+GR +GFG+V A A +G +LDGR IR++ ++ R
Sbjct: 448 NDYG-VKSVRLPTDRESGRPKGFGYVEFEDVEGAKKAFEANNGADLDGRPIRLDYSQPR 505
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG L ++VD++ L F + G V A V +R T +SRGFGFVT ++ E +KA+E+
Sbjct: 311 IFVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFASPEAVDKALELN 370
Query: 222 HRYDIDGRLLTVNKAAPRGTQP--ERAPRVF-----EPGFRIYVGNLPWEVDNARLEQVF 274
+ +IDGR + ++K+ + ER + F P ++VGNL ++ +L +VF
Sbjct: 371 GK-EIDGRPINIDKSVEKDQNQVRERRAKAFGDATSAPSSVLFVGNLSFDATEDQLWEVF 429
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
S++G V + R+ DRE+GR +GFG+V A L GQ + GRA+R++ ++ R
Sbjct: 430 SDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESAKKAHEGLAGQEIAGRAVRLDFSQPR 488
>gi|365760560|gb|EHN02272.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 371
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 100/186 (53%), Gaps = 7/186 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E E A +FVG L + +D E L FE G V A VI R TDRSRG+G+V A
Sbjct: 136 ESGEPATIFVGRLSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYA 195
Query: 215 EKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERAPRVF-----EPGFRIYVGNLPWEVDN 267
EKA++ +IDGR + + + P G + F EP +++GNL + D
Sbjct: 196 EKAIQEMQGKEIDGRPINCDLSTSKPAGNNTNDRAKKFGDTPSEPSDTLFLGNLSFNADR 255
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+ ++F++HG+VV+ R+ ET + +GFG+V SS + A+ +L G+ +D R +R+
Sbjct: 256 DTIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKALESLQGEYIDNRPVRL 315
Query: 328 NVAEDR 333
+ + R
Sbjct: 316 DYSSPR 321
>gi|681904|dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+SS E+ AI +
Sbjct: 242 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 301
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSSF 339
L+G +LDGR IRV+ AE R R F
Sbjct: 302 LNGADLDGRQIRVSEAEARPPRGQF 326
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D KLFVGNL ++VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTMST E E A
Sbjct: 90 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAA 149
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPE---RAPR 248
+ F+ Y+ +GR L VN P + E R PR
Sbjct: 150 QQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 182
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
F P +++VGNL + VD+A+L Q+F G V V+YD+ TGRSRGFGFVTMS+ E+
Sbjct: 87 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 146
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRR 336
A +G +GR +RVN +R
Sbjct: 147 AAAQQFNGYEFEGRPLRVNAGPPPPKR 173
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+L+VGNL + VD L LF + G V A VIY+R++ RS+GFGFVT+S+ +E +KA+
Sbjct: 242 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 301
Query: 221 FHRYDIDGRLLTVNKA---APRG 240
+ D+DGR + V++A PRG
Sbjct: 302 LNGADLDGRQIRVSEAEARPPRG 324
>gi|297820076|ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
gi|297323759|gb|EFH54180.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+SS E+ AI +
Sbjct: 255 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 314
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSSF 339
L+G +LDGR IRV+ AE R R F
Sbjct: 315 LNGADLDGRQIRVSEAEARPPRGQF 339
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D KLFVGNL ++VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTMST E E A
Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAA 157
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPE---RAPR 248
+ F+ Y+ +GR L VN P + E R PR
Sbjct: 158 QQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
F P +++VGNL + VD+A+L Q+F G V V+YD+ TGRSRGFGFVTMS+ E+
Sbjct: 95 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 154
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRR 336
A +G +GR +RVN +R
Sbjct: 155 AAAQQFNGYEFEGRPLRVNAGPPPPKR 181
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+L+VGNL + VD L LF + G V A VIY+R++ RS+GFGFVT+S+ +E +KA+
Sbjct: 255 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 314
Query: 221 FHRYDIDGRLLTVNKA---APRG 240
+ D+DGR + V++A PRG
Sbjct: 315 LNGADLDGRQIRVSEAEARPPRG 337
>gi|15231817|ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|18655393|gb|AAL76152.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 342
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+SS E+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSSF 339
L+G +LDGR IRV+ AE R R F
Sbjct: 318 LNGADLDGRQIRVSEAEARPPRGQF 342
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D KLFVGNL ++VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTMST E E A
Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAA 157
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPE---RAPR 248
+ F+ Y+ +GR L VN P + E R PR
Sbjct: 158 QQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
F P +++VGNL + VD+A+L Q+F G V V+YD+ TGRSRGFGFVTMS+ E+
Sbjct: 95 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 154
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRR 336
A +G +GR +RVN +R
Sbjct: 155 AAAQQFNGYEFEGRPLRVNAGPPPPKR 181
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+L+VGNL + VD L LF + G V A VIY+R++ RS+GFGFVT+S+ +E +KA+
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 221 FHRYDIDGRLLTVNKA---APRG 240
+ D+DGR + V++A PRG
Sbjct: 318 LNGADLDGRQIRVSEAEARPPRG 340
>gi|681902|dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+SS E+ AI +
Sbjct: 250 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 309
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSSF 339
L+G +LDGR IRV+ AE R R F
Sbjct: 310 LNGADLDGRQIRVSEAEARPPRGQF 334
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D KLFVGNL ++VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTMST E E A
Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAA 157
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPE---RAPR 248
+ F+ Y+ +GR L VN P + E R PR
Sbjct: 158 QQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
F P +++VGNL + VD+A+L Q+F G V V+YD+ TGRSRGFGFVTMS+ E+
Sbjct: 95 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 154
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRR 336
A +G +GR +RVN +R
Sbjct: 155 AAAQQFNGYEFEGRPLRVNAGPPPPKR 181
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+L+VGNL + VD L LF + G V A VIY+R++ RS+GFGFVT+S+ +E +KA+
Sbjct: 250 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 309
Query: 221 FHRYDIDGRLLTVNKA---APRG 240
+ D+DGR + V++A PRG
Sbjct: 310 LNGADLDGRQIRVSEAEARPPRG 332
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 100/183 (54%), Gaps = 7/183 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A +FVG L + +D E L F+ G V A VIY R TDRSRG+G+V AEKA
Sbjct: 185 EPATIFVGRLSWSIDDEWLKNEFDHIGGVVSARVIYERGTDRSRGYGYVDFEDKSYAEKA 244
Query: 218 VEMFHRYDIDGRLLTVN--KAAPRGTQPERAPRVF-----EPGFRIYVGNLPWEVDNARL 270
V+ H +IDGR + + + P G + + F EP +++GNL + D +
Sbjct: 245 VKEMHGKEIDGRPINCDLSTSKPAGNPRDDRAKKFGDLPSEPSETLFLGNLSFNADRDNI 304
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
++FS+ G++V+ R+ ET + +GFG+V + + A+ AL G+ +D R +R++ +
Sbjct: 305 YEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYGNVDDAKKALDALQGEYIDNRPVRLDYS 364
Query: 331 EDR 333
R
Sbjct: 365 TPR 367
>gi|334185950|ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645571|gb|AEE79092.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 363
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+SS E+ AI +
Sbjct: 279 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 338
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSSF 339
L+G +LDGR IRV+ AE R R F
Sbjct: 339 LNGADLDGRQIRVSEAEARPPRGQF 363
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D KLFVGNL ++VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTMST E E A
Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAA 157
Query: 219 EMFHRY 224
+ F+ Y
Sbjct: 158 QQFNGY 163
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+L+VGNL + VD L LF + G V A VIY+R++ RS+GFGFVT+S+ +E +KA+
Sbjct: 279 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 338
Query: 221 FHRYDIDGRLLTVNKA---APRG 240
+ D+DGR + V++A PRG
Sbjct: 339 LNGADLDGRQIRVSEAEARPPRG 361
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 21/108 (19%)
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS----- 304
F P +++VGNL + VD+A+L Q+F G V V+YD+ TGRSRGFGFVTMS+
Sbjct: 95 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 154
Query: 305 ----------------ETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
L I L G +GR +RVN +R
Sbjct: 155 AAAQQFNGYVSRYLCSLLCLYLLIRVLCGLEFEGRPLRVNAGPPPPKR 202
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 100/175 (57%), Gaps = 7/175 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A ++VG L ++VD+E LA F+ G V A V+++ + +S+GFGFV T EEA KAV
Sbjct: 212 ANVYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDHQNQKSKGFGFVRFKTAEEAAKAVA 271
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQP-ERAPRVFE-----PGFRIYVGNLPWEVDNARLEQV 273
M ++IDGR + + AA + P ER + F P +Y+G L ++++ + +
Sbjct: 272 MTG-HEIDGRAIRCDFAAEKTDNPVERRAQKFNDQRSAPAATLYLGGLSYDLNEDAVYEA 330
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
F + G + + DRETG +GFG+V + + A+ A++G+ L GR IRV+
Sbjct: 331 FGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQATAALEAMNGKELSGRRIRVD 385
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
EP +YVG L W VDN L F G+VV ARV++D + +S+GFGFV + E
Sbjct: 209 EPTANVYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDHQNQKSKGFGFVRFKTAEEAAK 268
Query: 311 AIAALDGQNLDGRAIRVNVAEDR 333
A+ A+ G +DGRAIR + A ++
Sbjct: 269 AV-AMTGHEIDGRAIRCDFAAEK 290
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 107/185 (57%), Gaps = 8/185 (4%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E P ++ +FVGNL ++VD E LA F GTVE A +I ++ET R++GFG+VT + +
Sbjct: 178 EEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESADAL 237
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPR----GTQPER--APRVFEPGFRIYVGNLPWEVDNA 268
A+ + ++DGR + V+ + P+ G + R AP+ P +++GNL + V
Sbjct: 238 TAAMALTG-TELDGREIRVDVSTPKPPRDGNRQGRKEAPQS-APTTTLFLGNLSFNVTED 295
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ + FS++G++V+ R DR+TG +GFG+V A+ L+G + GR++R++
Sbjct: 296 EIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLNGVEIAGRSLRLD 355
Query: 329 VAEDR 333
A R
Sbjct: 356 YAGGR 360
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 242 QPERAPRVFEP-GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 300
+P + P+ EP ++VGNL W VD L F++ G V +AR++ D+ETGR++GFG+V
Sbjct: 170 EPTKKPKTEEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYV 229
Query: 301 TMSSETELNDAIAALDGQNLDGRAIRVNVA 330
T S L A+ AL G LDGR IRV+V+
Sbjct: 230 TFESADALTAAM-ALTGTELDGREIRVDVS 258
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 100/186 (53%), Gaps = 11/186 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LFVGNL ++VD E L FE G + ++ +R++ RSRGFG+V + E+A KA E
Sbjct: 265 ANLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDAAKAFE 324
Query: 220 MFHRYDIDGRLLTVNKAAPR----GTQPERAPRVFEPGFR-------IYVGNLPWEVDNA 268
++DGR L ++ A R G + R G + +++GN+ + D
Sbjct: 325 AKKGAELDGRPLNLDYANARQNAGGAKDRSQARAKSFGDQTSPESDTLFIGNISFGADEN 384
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+++ FS +G + R+ D E+GR +GFG++ SS E A+ L G L GRA+R++
Sbjct: 385 AIQETFSSYGTISGIRLPTDPESGRPKGFGYIQFSSVDEARSALNELQGSELAGRAMRLD 444
Query: 329 VAEDRQ 334
+ RQ
Sbjct: 445 FSTPRQ 450
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 97/179 (54%), Gaps = 8/179 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG L ++VD++ LA F + G V A V +R T +SRGFG+VT +TVE + A+
Sbjct: 46 IFVGKLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFGYVTFATVEAVDAAIAQN 105
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRV-------FEPGFRIYVGNLPWEVDNARLEQVF 274
+ +IDGR + ++K+ + R R EP ++VGNL W+ L + F
Sbjct: 106 GK-EIDGRAVNIDKSIEKDKGAVRQKRAEAYGDKASEPSSVLFVGNLSWDATEDTLWETF 164
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+E+G + + RV DRETG+ +GF +V S A G + GR IRV+ ++ R
Sbjct: 165 NEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASKKAFEGAAGAEVAGRNIRVDFSQPR 223
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P E A +FVG L + +D E L FE G V A VIY R T+RSRG+G+V AE
Sbjct: 207 PTEPATIFVGRLSWSIDDEWLKTEFEHIGGVISARVIYERGTERSRGYGYVDFEDKSYAE 266
Query: 216 KAVEMFHRYDIDGRLLTVNKAA--PRGTQPERAPRVF-----EPGFRIYVGNLPWEVDNA 268
KA++ +IDGR + V+ + P E + F +P +++GNL + D
Sbjct: 267 KAIKEMQGKEIDGRPINVDMSTSKPASNPKEDRAKKFGDVPSQPSDTLFLGNLSFNADRD 326
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ ++F ++G +++ R+ ET + +GFG+V +S E A+ L G+ +D R +R++
Sbjct: 327 NIFELFKDYGSIISVRIPTHPETNQPKGFGYVQYASIEEAQKALDKLQGEYIDNRPVRLD 386
Query: 329 VAEDR 333
+ R
Sbjct: 387 FSSPR 391
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 10/177 (5%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P AKLF+G L +D EKL F K G++ A V+ +R+T R RGFGFVT + A+
Sbjct: 6 PTSAKLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAADA 65
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
VE H IDGR + K+ P+ +P+ +++VG L + + + FS+
Sbjct: 66 VVEDVHV--IDGRQIDAKKSVPQEMKPKAR--------KVFVGGLSPDTTEDQFREYFSQ 115
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G+VV A+++ D +GRSRGFGFVT + + AA +L G+ + V A +
Sbjct: 116 FGEVVEAQIMQDHMSGRSRGFGFVTFAEDASAESVFAAGTMHDLGGKKVEVKPATPK 172
>gi|344231201|gb|EGV63083.1| hypothetical protein CANTEDRAFT_106956 [Candida tenuis ATCC 10573]
Length = 231
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 104/188 (55%), Gaps = 7/188 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A LFVG L +++D + L FE +G V A VI R T +SRG+G+V + +AEKA
Sbjct: 1 EPATLFVGRLSWNIDDDWLKREFEPSGGVISARVIMERATGKSRGYGYVDFESKADAEKA 60
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPR-------VFEPGFRIYVGNLPWEVDNARL 270
++ F +IDGR + ++ + + P + R V P +++GNL + +L
Sbjct: 61 LQDFQGKEIDGRPINLDLSTSKPQTPAKNDRAKKFGDVVSAPSDTLFIGNLSFNATRDKL 120
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ F ++G+V++ R+ +T + +GFG+V S E A+ AL+G+ ++GR R++ +
Sbjct: 121 FEAFGQYGEVISCRIPTHPDTQQPKGFGYVQYGSIEEAKAALEALNGEYIEGRPCRLDYS 180
Query: 331 EDRQRRSS 338
R SS
Sbjct: 181 TPRDPASS 188
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTV 211
+ V P D LF+GNL ++ +KL F + G V + + +T + +GFG+V ++
Sbjct: 97 DVVSAPSDT-LFIGNLSFNATRDKLFEAFGQYGEVISCRIPTHPDTQQPKGFGYVQYGSI 155
Query: 212 EEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 248
EEA+ A+E + I+GR ++ + PR + PR
Sbjct: 156 EEAKAALEALNGEYIEGRPCRLDYSTPRDPASSQKPR 192
>gi|116787064|gb|ABK24360.1| unknown [Picea sitchensis]
Length = 365
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 101/182 (55%), Gaps = 11/182 (6%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P KLFV L ++ S+ L FE+ G +E VI ++ + +SRGFGFVT ++ A+K
Sbjct: 66 PAHRKLFVRGLAWETSSQTLCDAFEQYGEIEEGAVIMDKASGKSRGFGFVTFKHMDSAQK 125
Query: 217 AVEMFHRYDIDGRLLTVNKAAPR---GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
A++ + IDGR+ N A G ++A R ++Y+G L ++ N +L +V
Sbjct: 126 ALKEPSK-TIDGRITVSNLAVASTGPGQSADQAQR------KLYIGGLSYDTANDKLLEV 178
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FS++G++ V YD+ T +SRGF FVT + A+ + + +DGR + V +A D
Sbjct: 179 FSKYGEIEEGSVAYDKNTNKSRGFAFVTFKTVEATKRALKEPN-KTIDGRTVTVKLAADG 237
Query: 334 QR 335
Q+
Sbjct: 238 QK 239
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL++G L YD ++KL +F K G +E V Y++ T++SRGF FVT TVE ++A++
Sbjct: 160 KLYIGGLSYDTANDKLLEVFSKYGEIEEGSVAYDKNTNKSRGFAFVTFKTVEATKRALKE 219
Query: 221 FHRYDIDGRLLTVNKAA-PRGTQPERAPRV 249
++ IDGR +TV AA + +P+ P V
Sbjct: 220 PNK-TIDGRTVTVKLAADGQKEKPQSQPAV 248
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVGNL ++VD E L FE G + ++ RET RSRGFG+V + A+ A E
Sbjct: 227 LFVGNLSWNVDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADASSAKAAYEAK 286
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPR-------------VFEPGFRIYVGNLPWEVDNA 268
++DGR + ++ A PR + APR ++VGNL + VD
Sbjct: 287 KDTELDGRTINLDYAKPRDANSQ-APREKAQTRARSFGDQTSPESNTLFVGNLVFGVDEN 345
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ +VF G++ R+ D ETGR +G+G+V SS E A+ L G ++ GRAIR++
Sbjct: 346 AVREVFEGQGQIQGVRLPTDAETGRPKGYGYVEFSSVDEARQALNELQGTDIGGRAIRLD 405
Query: 329 VAEDR 333
+ R
Sbjct: 406 FSTPR 410
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 102/179 (56%), Gaps = 9/179 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG L + VD+++LA F G +E A V +R T +SRGFG+V +T + EKA++M
Sbjct: 1 VFVGQLSWAVDNDRLAQEFADCGEIESATVQMDRNTGKSRGFGYVHFTTPDAVEKALQM- 59
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPR-------VFEPGFRIYVGNLPWEVDNARLEQVF 274
+ +IDGR + V+++ PR R R V P ++VGNL + V + F
Sbjct: 60 NGQEIDGRAIKVDRSLPRDKSQVREKRAQAFGDEVSAPSSTLFVGNLSFGVTEDTVWSFF 119
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+++G V + R+ DRETGR +GFG+V A A +G ++GR+IR++ ++ R
Sbjct: 120 NDYG-VKSVRLPTDRETGRPKGFGYVEFEDIDGAKKAFEAANGSEIEGRSIRLDYSQPR 177
>gi|344304396|gb|EGW34628.1| hypothetical protein SPAPADRAFT_57674 [Spathaspora passalidarum
NRRL Y-27907]
Length = 414
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 7/186 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E E A LFVG L +++D E L FE G V A VI R T +SRG+G+V + A
Sbjct: 170 ETDEPATLFVGRLSWNIDDEWLKREFEHIGGVIGARVIMERSTGKSRGYGYVDFDNKDSA 229
Query: 215 EKAVEMFHRYDIDGRLLTVNKAA--PRGTQPERAPRVF-----EPGFRIYVGNLPWEVDN 267
EKA+ +IDGR + ++ + P ++ + F P +++GNL +
Sbjct: 230 EKALVEMQGKEIDGRPINLDMSTGKPHASKSNDRAKQFGDTPSAPSDTLFIGNLSFNAQR 289
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L ++F +HG V++ R+ +T + +GFG+V SS E A+ AL+G+ ++GRA R+
Sbjct: 290 DNLFEIFGQHGTVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYIEGRACRL 349
Query: 328 NVAEDR 333
+ + R
Sbjct: 350 DFSAPR 355
>gi|154296105|ref|XP_001548485.1| hypothetical protein BC1G_12782 [Botryotinia fuckeliana B05.10]
Length = 518
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 102/200 (51%), Gaps = 16/200 (8%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
EE E LFVGNL +++D E L FE+ G + A VI ++ T RS+GFG+V
Sbjct: 257 EETAEDNGSKNLFVGNLSWNIDDEWLYREFEEFGEISGARVISDKATGRSKGFGYVEFVK 316
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR-------------VFEPGFRIY 257
+A A+ IDGR V+ + PR T APR P ++
Sbjct: 317 SSDAAAALAAKKGALIDGREANVDFSTPRDTT---APRERANNRAAQFGDAKNPPSDTLF 373
Query: 258 VGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDG 317
+GNL ++ D + + F EHG VVN R+ D+ETG +GFG+VT S + A A+ G
Sbjct: 374 LGNLSFDADENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSVEDATAAYDAMMG 433
Query: 318 QNLDGRAIRVNVAEDRQRRS 337
++ GR +R++ A R RS
Sbjct: 434 ADIAGRPVRLDYATPRPERS 453
>gi|301087136|gb|ADK60785.1| chloroplast ribonucleoprotein [Arachis diogoi]
Length = 146
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 61/76 (80%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D KLFVGNLP+ VDS +LA LFE AGTVE+ EVIY++ + RSRGFGFVTMS++EEAE A
Sbjct: 67 DLKLFVGNLPFSVDSAQLAELFESAGTVEVVEVIYDKMSGRSRGFGFVTMSSIEEAEAAK 126
Query: 219 EMFHRYDIDGRLLTVN 234
+ F Y++DGR L VN
Sbjct: 127 QQFDGYELDGRALRVN 142
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 11/111 (9%)
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V +F ++D D +L+ + R F P +++VGNLP+ VD+A+L ++F
Sbjct: 43 VALFSQFDQDEEILS-----------DGDDRSFSPDLKLFVGNLPFSVDSAQLAELFESA 91
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
G V V+YD+ +GRSRGFGFVTMSS E A DG LDGRA+RVN
Sbjct: 92 GTVEVVEVIYDKMSGRSRGFGFVTMSSIEEAEAAKQQFDGYELDGRALRVN 142
>gi|222837999|gb|EEE76364.1| predicted protein [Populus trichocarpa]
Length = 121
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Query: 180 FEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 239
F + G V A+V+ R+T RS+GFGFV M + EA+ A++ H + GR L VN+A P
Sbjct: 1 FSEFGAVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVNEARP- 59
Query: 240 GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 299
+P F G ++YVGNLP+ V + LEQ FS+ G V +ARV+ +R+TGRS+GFGF
Sbjct: 60 -MEPRAPLEEFLMGNKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGF 118
Query: 300 VTM 302
V M
Sbjct: 119 VEM 121
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FSE G V +A+V+ +R+TGRS+GFGFV M S+ E AI L GQN GR + VN A
Sbjct: 1 FSEFGAVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVNEARPM 60
Query: 334 QRRS 337
+ R+
Sbjct: 61 EPRA 64
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 30/48 (62%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
KL+VGNLPY V L F + G V A V+ R+T RS+GFGFV M
Sbjct: 74 KLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEM 121
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 149 EEEEFVEPP-------EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSR 201
EEEE P E LF+GNL ++VD E L FE+ G + ++ +R++ RSR
Sbjct: 211 EEEEVTAPKKTKVDSNEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSR 270
Query: 202 GFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGTQPERAPRVFEP--- 252
GFG+V + +A KA ++DGR L V+ AAP+ RA +
Sbjct: 271 GFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGRSNAAPKERAQSRAQNFGDQTSP 330
Query: 253 -GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
+++GN+ + + + + F+EHG ++ R+ D E+GR +GFG+V SS E A
Sbjct: 331 ESDTLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSA 390
Query: 312 IAALDGQNLDGRAIRVNVAEDRQ 334
AL+G +L GR++R++ + RQ
Sbjct: 391 FQALNGADLGGRSMRLDFSSPRQ 413
>gi|347441280|emb|CCD34201.1| hypothetical protein [Botryotinia fuckeliana]
Length = 492
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 103/197 (52%), Gaps = 10/197 (5%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
EE E LFVGNL +++D E L FE+ G + A VI ++ T RS+GFG+V
Sbjct: 231 EETAEDNGSKNLFVGNLSWNIDDEWLYREFEEFGEISGARVISDKATGRSKGFGYVEFVK 290
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP------ERAPRVFE----PGFRIYVGN 260
+A A+ IDGR V+ + PR T RA + + P +++GN
Sbjct: 291 SSDAAAALAAKKGALIDGREANVDFSTPRDTTAPRERANNRAAQFGDAKNPPSDTLFLGN 350
Query: 261 LPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL 320
L ++ D + + F EHG VVN R+ D+ETG +GFG+VT S + A A+ G ++
Sbjct: 351 LSFDADENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSVEDATAAYDAMMGADI 410
Query: 321 DGRAIRVNVAEDRQRRS 337
GR +R++ A R RS
Sbjct: 411 AGRPVRLDYATPRPERS 427
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 9/200 (4%)
Query: 140 EESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDR 199
EES E + +E EP A +FVG L + +D E L FE G V A VIY + TDR
Sbjct: 144 EESSESKKQKPDESEEP---ATIFVGRLSWSIDDEWLKTEFEPIGGVLSARVIYEKGTDR 200
Query: 200 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA--PRGTQPERAPRV----FEPG 253
SRG+G+V AEKA++ +IDGR + + + P +RA + EP
Sbjct: 201 SRGYGYVDFKNKTFAEKAIKEMQGKEIDGRPINCDMSTSKPASNGGDRAKKFGDTPSEPS 260
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+++GNL ++ D + +VFS++G++++ R+ ET + +GFG+V A+
Sbjct: 261 ETLFLGNLSFDADRDNIYEVFSKYGEIISVRIPTHPETEQPKGFGYVQYGDVESAKKALD 320
Query: 314 ALDGQNLDGRAIRVNVAEDR 333
AL G+ ++ R +R++ + R
Sbjct: 321 ALQGEYINNRPVRLDFSTPR 340
>gi|388504962|gb|AFK40547.1| unknown [Lotus japonicus]
Length = 285
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 104/179 (58%), Gaps = 5/179 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+V LP+ + + + LF + GTV E+I ++ R +G+ FVTM++ EEA+ AV+
Sbjct: 87 KLYVFTLPWSMSAADIKDLFGQCGTVTDVEIIRGKD-GRGKGYAFVTMASGEEAQAAVDK 145
Query: 221 FHRYDIDGRLLTVNKAA---PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
F ++ GR+L V A +P E IY NL W+V + L + F+E+
Sbjct: 146 FDTLELSGRILRVELAKRFKKPSPPGPPSPPPSEARHVIYASNLAWKVRSTHLREFFTEN 205
Query: 278 GKV-VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
K ++AR+V+D +G + G+GF++ ++ E AI+ALDG+ L GR++ + ++E + +
Sbjct: 206 FKAPLSARIVFDTPSGWATGYGFISYLTKEEAEAAISALDGKELMGRSLFLKISEKKVK 264
>gi|79316226|ref|NP_001030925.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189111|gb|AEE27232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 294
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 12/198 (6%)
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVI-YNRETDR 199
E ++ V + E V+ P +L+V N+P D +L +F+ GTV EV+ N +T
Sbjct: 89 EPNKDSVVSKAEPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVVSRNPQTGE 148
Query: 200 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV---------- 249
SRG G+VTM ++ A+ A+ ++ GR + V + R P V
Sbjct: 149 SRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGTRRNPEVLNSTPKKILM 208
Query: 250 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
+E ++YVGNLPW L FS+ G +V+ RV++DR+TGR+R F F++ +S E
Sbjct: 209 YESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTSGEE-R 267
Query: 310 DAIAALDGQNLDGRAIRV 327
DA + +G +GR I V
Sbjct: 268 DAALSFNGTQYEGRRIIV 285
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 242 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV-YDRETGRSRGFGFV 300
+P + PR E +YV N+P D A+L +F G V++ VV + +TG SRG G+V
Sbjct: 100 EPVKKPRPCE----LYVCNIPRSYDIAQLLDMFQPFGTVISVEVVSRNPQTGESRGSGYV 155
Query: 301 TMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
TM S AIA+LDG + GR +RV + D
Sbjct: 156 TMGSINSAKIAIASLDGTEVGGREMRVRYSVD 187
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
++K+FVG L ++ E L FE G V ++ ++ T RGFGFVT E A++A
Sbjct: 49 NSKIFVGGLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEESADRAA 108
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
R+++DGR + KA P+ R+ +V +P +I+VG LP + F G
Sbjct: 109 TK--RHELDGRQVEAKKAVPKAEYITRS-QVTKPTRKIFVGGLPLSCTEEDFMEYFERLG 165
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
VV A ++YD +TG SRGFGFVT SSE ++ + + + G+ + V AE +
Sbjct: 166 HVVEAHIMYDHQTGISRGFGFVTFSSE-DMVEKVFEQSQHEIKGKIVEVKKAEPKH 220
>gi|400597074|gb|EJP64818.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 769
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 106/182 (58%), Gaps = 12/182 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFV +LP +V +E LA F + V+ A V+ +++T SRGFGFVT++ ++A++A +F
Sbjct: 44 LFVRSLPPNVTNESLAEFFSEYFPVKHATVVIDQQTKESRGFGFVTLADADDAKQAQIVF 103
Query: 222 HRYDIDGRLLTVNKAAPR-------GTQPERAPRV--FEPGFRIYVGNLPWEVDNA-RLE 271
+ + R + V A PR G QP + P FEP ++ V NLPW + N+ +L
Sbjct: 104 DKKRWEDRTIRVEVAEPRQRKEATEGAQPRQKPGKPEFEPTPKLIVRNLPWSIRNSEQLG 163
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+F +GKV A + ++ G+ +GFGFVT+ + A+ ++G+ +DGR + V+ A
Sbjct: 164 HLFRSYGKVKFADLPKNK--GKLKGFGFVTLRGKKNAEKALEGINGKEIDGRTLAVDWAV 221
Query: 332 DR 333
D+
Sbjct: 222 DK 223
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++V +LP V N L + FSE+ V +A VV D++T SRGFGFVT++ + A
Sbjct: 44 LFVRSLPPNVTNESLAEFFSEYFPVKHATVVIDQQTKESRGFGFVTLADADDAKQAQIVF 103
Query: 316 DGQNLDGRAIRVNVAEDRQRRSS 338
D + + R IRV VAE RQR+ +
Sbjct: 104 DKKRWEDRTIRVEVAEPRQRKEA 126
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 161 KLFVGNLPYDV-DSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KL V NLP+ + +SE+L LF G V+ A++ N+ + +GFGFVT+ + AEKA+E
Sbjct: 146 KLIVRNLPWSIRNSEQLGHLFRSYGKVKFADLPKNK--GKLKGFGFVTLRGKKNAEKALE 203
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER 245
+ +IDGR L V+ A + T +R
Sbjct: 204 GINGKEIDGRTLAVDWAVDKDTWEQR 229
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 23/102 (22%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NLP+ + E L F G V A V+ ++ TDR G FV E+A+ ++
Sbjct: 321 IFVRNLPFTTNDEHLKSFFSSFGNVRYARVVMDKATDRPAGTAFVCFYQEEDAKTCIKGA 380
Query: 222 HR-----------------------YDIDGRLLTVNKAAPRG 240
R Y +DGRLL++ +A R
Sbjct: 381 PRRQQPAASGKKSILKDDNLDPTGKYTLDGRLLSIAQAVNRA 422
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
I+V NLP+ ++ L+ FS G V ARVV D+ T R G FV E + I
Sbjct: 321 IFVRNLPFTTNDEHLKSFFSSFGNVRYARVVMDKATDRPAGTAFVCFYQEEDAKTCI 377
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 109/204 (53%), Gaps = 18/204 (8%)
Query: 149 EEEEFVEPPEDAK--------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRS 200
+EEE V P+ K LF+GNL ++VD E L FE+ G + ++ +R++ RS
Sbjct: 240 DEEEEVSAPKKTKVDSNEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRS 299
Query: 201 RGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGTQPERAPRVFEP-- 252
RGFG+V + +A KA ++DGR L V+ AAP+ RA +
Sbjct: 300 RGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGRSNAAPKERAQSRAQNFGDQTS 359
Query: 253 --GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
+++GN+ + + + + F+EHG ++ R+ D E+GR +GFG+V SS E
Sbjct: 360 PESDTLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARS 419
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQ 334
A AL+G +L GR++R++ + RQ
Sbjct: 420 AFQALNGADLGGRSMRLDFSSPRQ 443
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 14/188 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LFVGNL ++VD L FE+ G + ++ R+T RSRGFG+V + +A KA E
Sbjct: 195 ANLFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFE 254
Query: 220 MFHRYDIDGRLLTVNKAAPR-------GTQPERAPRVFEPGFR-------IYVGNLPWEV 265
+IDGR + ++ A R G Q R G + ++VGN+P+
Sbjct: 255 AKRDTEIDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQASPESDTLFVGNIPFSA 314
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
+ L +VF + G ++ R+ D E+GR +GFG+V SS E +A L+G +DGR +
Sbjct: 315 NEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREAFNELNGAEIDGRPV 374
Query: 326 RVNVAEDR 333
R++ + R
Sbjct: 375 RLDFSTPR 382
>gi|116180414|ref|XP_001220056.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
gi|88185132|gb|EAQ92600.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
Length = 475
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 11/185 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VGNL + VD L F+ + A V+ ++ET RSRGFG+V + E A+KA +
Sbjct: 221 ATLWVGNLGWGVDDNALYEEFQSIEGIVSARVVSDKETGRSRGFGYVDFDSAEAAQKAYD 280
Query: 220 MFHRYDIDGRLLTVNKA-------APRGTQPERAPR----VFEPGFRIYVGNLPWEVDNA 268
+ GR L ++ A AP +RA + + P ++VGNLP+ D +
Sbjct: 281 EKSGAFLQGRDLRLDFASKPSADSAPNARAADRAKKHGDVISPPSDTLFVGNLPFSADES 340
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ F+E +V + R+ D+E+GR +GF +VT SS + AL+G +LDGR +R++
Sbjct: 341 SVSNYFNEVAQVQSLRIPTDQESGRPKGFAYVTFSSIDDAKKVFEALNGGDLDGRPVRLD 400
Query: 329 VAEDR 333
A+ R
Sbjct: 401 YAKPR 405
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 14/188 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LFVGNL ++VD L FE+ G + ++ R+T RSRGFG+V + +A KA E
Sbjct: 280 ANLFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFE 339
Query: 220 MFHRYDIDGRLLTVNKAAPR-------GTQPERAPRVFEPGFR-------IYVGNLPWEV 265
+IDGR + ++ A R G Q R G + ++VGN+P+
Sbjct: 340 AKRDTEIDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQASPESDTLFVGNIPFSA 399
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
+ L +VF + G ++ R+ D E+GR +GFG+V SS E +A L+G +DGR +
Sbjct: 400 NEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREAFNELNGAEIDGRPV 459
Query: 326 RVNVAEDR 333
R++ + R
Sbjct: 460 RLDFSTPR 467
>gi|300176323|emb|CBK23634.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 25/191 (13%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+ V N+P+ +SE L F G V A ++YNRE+ RSRGFGFV+ + E +KA++M
Sbjct: 7 KVLVKNIPFTCNSETLIEFFSACGDVIDANILYNRESGRSRGFGFVSFRSEEGLKKALDM 66
Query: 221 FHRYDIDGRLLTV-------------------NKAAPRGTQPERAP-----RVFEPGFRI 256
+ +++GR+L V +K R +RAP R ++ ++
Sbjct: 67 -NGTNMNGRVLRVIKKEDREDRDERRVRDRRTHKDVKRERSRDRAPAPAPARSYDNTNKL 125
Query: 257 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
V LPW+ A L ++F + GK+V +V +RETG SRG G V E A+ +D
Sbjct: 126 IVLQLPWKCTKADLTKLFDKFGKIVYCNIVVNRETGLSRGMGIVKYEEEESYQKALKEMD 185
Query: 317 GQNLDGRAIRV 327
+GR + V
Sbjct: 186 CFEYEGRKLYV 196
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
EP +++ V N+P+ ++ L + FS G V++A ++Y+RE+GRSRGFGFV+ SE L
Sbjct: 3 EPEYKVLVKNIPFTCNSETLIEFFSACGDVIDANILYNRESGRSRGFGFVSFRSEEGLKK 62
Query: 311 AIAALDGQNLDGRAIRV 327
A+ ++G N++GR +RV
Sbjct: 63 AL-DMNGTNMNGRVLRV 78
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A LFVG L + VD E L F G V A VI R TDRSRG+G+V + AEKA
Sbjct: 147 EPATLFVGRLSWSVDDEWLKNEFAPIGGVVSARVIMERGTDRSRGYGYVDFEDISYAEKA 206
Query: 218 VEMFHRYDIDGRLLTVNKAAPR---GTQPERAPRV----FEPGFRIYVGNLPWEVDNARL 270
++ +IDGR + V+ + + G +RA + EP +++GNL ++ D L
Sbjct: 207 LKEMQGKEIDGRPINVDMSTSKPAGGASNDRAKKFGDVPSEPSDTLFLGNLSFDADRDNL 266
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
++F + G++++ R+ ET + +GFG+V ++ + A+ AL G++++ R +R++ +
Sbjct: 267 YEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTNTEDAKKALDALQGESINDRPVRLDFS 326
Query: 331 EDR 333
R
Sbjct: 327 TPR 329
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 103/185 (55%), Gaps = 9/185 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A LFVG L + +D E L FE G V A VI+ R T +SRG+G+V + AEKA
Sbjct: 233 EPATLFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSRGYGYVDFDSKSAAEKA 292
Query: 218 VEMFHRYDIDGRLLTVNKA-----APRGTQPERAPRVFE----PGFRIYVGNLPWEVDNA 268
++ + +IDGR + ++ + A +RA + + P +++GNL + +
Sbjct: 293 LKEYQGREIDGRPINLDMSTGKPHASNNRSNDRASKFGDTPSAPSDTLFLGNLSFNANRD 352
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
L +VFSE+G +V+ R+ +T + +GFG+V S E A+ AL+G+ ++GR +R++
Sbjct: 353 NLSEVFSEYGSIVSVRIPTHPDTEQPKGFGYVQYGSVDEAKAALEALNGEYIEGRPVRLD 412
Query: 329 VAEDR 333
+ R
Sbjct: 413 FSAPR 417
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%)
Query: 243 PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 302
P + +V E ++VG L W +D+ L++ F G V++ARV+++R TG+SRG+G+V
Sbjct: 224 PAKKQKVDEEPATLFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSRGYGYVDF 283
Query: 303 SSETELNDAIAALDGQNLDGRAIRVNVA 330
S++ A+ G+ +DGR I ++++
Sbjct: 284 DSKSAAEKALKEYQGREIDGRPINLDMS 311
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 14/185 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVGNL ++VD E L FE+ G + ++ RE+ RSRGFG+V + A+ A E
Sbjct: 233 LFVGNLSWNVDEEWLRREFEEFGELSGVRIMTERESGRSRGFGYVEYADASSAKAAYEAK 292
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPR-------------VFEPGFRIYVGNLPWEVDNA 268
+IDGR + ++ A PR +APR ++VGNL + VD
Sbjct: 293 KDAEIDGRTINLDYAKPRDAN-NQAPREKAQNRARSFGDQTSPESNTLFVGNLVFGVDEN 351
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ +VF G++ R+ D ETGR +G+G+V SS E A+ L G ++ GRAIR++
Sbjct: 352 AVREVFEGQGQIQGIRLPTDAETGRPKGYGYVEFSSVDEARQALNDLQGTDIGGRAIRLD 411
Query: 329 VAEDR 333
+ R
Sbjct: 412 FSTPR 416
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 104/191 (54%), Gaps = 10/191 (5%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
V+ E LF+GNL ++VD E L FE+ G + ++ +R++ RSRGFG+V + +
Sbjct: 225 VDSNEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAAD 284
Query: 214 AEKAVEMFHRYDIDGRLLTVN------KAAPRGTQPERAPRVFEPGF----RIYVGNLPW 263
A KA ++DGR L V+ AAP+ RA + +++GN+ +
Sbjct: 285 AAKAHAAKKDAELDGRKLNVDFANGRSNAAPKERAQSRAQNFGDQTSPESDTLFIGNIAF 344
Query: 264 EVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGR 323
+ + + F+EHG ++ R+ D E+GR +GFG+V SS E A AL+G +L GR
Sbjct: 345 SANENMISEAFAEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQALNGADLGGR 404
Query: 324 AIRVNVAEDRQ 334
++R++ + RQ
Sbjct: 405 SMRLDFSSPRQ 415
>gi|125563035|gb|EAZ08415.1| hypothetical protein OsI_30679 [Oryza sativa Indica Group]
Length = 226
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 103/180 (57%), Gaps = 17/180 (9%)
Query: 154 VEPPEDA---KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
+E PE+ KL+VGN+P V +++LA +F GTVE AEV++++ T RSR FGFVTMST
Sbjct: 61 LEAPEEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMST 120
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARL 270
EEA A+E + ++ GR + VN +R+ EP F VD+
Sbjct: 121 PEEANAAIESLNETEVGGRKIKVNVTESFLPNIDRSAPEPEPVF----------VDS--- 167
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
Q G+V++A V T +S+G+GFVT SSE E+ A++ + L+G+ IRVN A
Sbjct: 168 -QYRFTLGEVLSATVSRIPGTAKSKGYGFVTFSSEEEVEAAVSTFNNAELEGQPIRVNKA 226
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGN+P V N L +F++HG V A V++D+ TGRSR FGFVTMS+ E N AI +
Sbjct: 71 KLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIES 130
Query: 315 LDGQNLDGRAIRVNVAED 332
L+ + GR I+VNV E
Sbjct: 131 LNETEVGGRKIKVNVTES 148
>gi|225459201|ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|302142004|emb|CBI19207.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
EEEEF +L N+P+ ++ + LFEK GTV E+ + +T R+RG F++M
Sbjct: 82 EEEEF----SRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKT-RNRGLAFISM 136
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--GFRIYVGNLPWEVD 266
+ EEA A+ Y+++GR + VN A P+ +P +P +P + +++ NLP++
Sbjct: 137 GSPEEALAALSNLESYELEGRAIKVNYANPQKKKPS-SPIQHKPVTPYNLFIANLPYQAR 195
Query: 267 NARLEQVFSE-HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
L + FS + VV+A V++ RS G+GFV+ S+ E + A+++ GQ GR +
Sbjct: 196 AKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPL 255
Query: 326 RV 327
RV
Sbjct: 256 RV 257
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+ N+PW + +F ++G V++ + +T R+RG F++M S E A++
Sbjct: 90 RLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKT-RNRGLAFISMGSPEEALAALSN 148
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSS 338
L+ L+GRAI+VN A ++++ S
Sbjct: 149 LESYELEGRAIKVNYANPQKKKPS 172
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGT-VEIAEVIYNRETDRSRGFGFVTMSTVEE 213
+P LF+ NLPY ++ L F V AEVI++ RS G+GFV+ + EE
Sbjct: 178 KPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEE 237
Query: 214 AEKAVEMFHRYDIDGRLLTVNKA 236
A+ A+ F GR L V ++
Sbjct: 238 ADTALSSFQGQMFMGRPLRVARS 260
>gi|147769276|emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
Length = 294
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 102/182 (56%), Gaps = 9/182 (4%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
EEEEF +L N+P+ ++ + LFEK GTV E+ + +T R+RG F++M
Sbjct: 82 EEEEF----SRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKT-RNRGLAFISM 136
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--GFRIYVGNLPWEVD 266
+ EEA A+ Y+++GR + VN A P+ +P +P +P + +++ NLP++
Sbjct: 137 GSPEEALAALSNLESYELEGRAIKVNYANPQKKKPS-SPIQHKPVTPYNLFIANLPYQAR 195
Query: 267 NARLEQVFSE-HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
L + FS + VV+A V++ RS G+GFV+ S+ E + A+++ GQ GR +
Sbjct: 196 AKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPL 255
Query: 326 RV 327
RV
Sbjct: 256 RV 257
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+ N+PW + +F ++G V++ + +T R+RG F++M S E A++
Sbjct: 90 RLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKT-RNRGLAFISMGSPEEALAALSN 148
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSS 338
L+ L+GRAI+VN A ++++ S
Sbjct: 149 LESYELEGRAIKVNYANPQKKKPS 172
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGT-VEIAEVIYNRETDRSRGFGFVTMSTVEE 213
+P LF+ NLPY ++ L F V AEVI++ RS G+GFV+ + EE
Sbjct: 178 KPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEE 237
Query: 214 AEKAVEMFHRYDIDGRLLTVNKA 236
A+ A+ F GR L V ++
Sbjct: 238 ADTALSSFQGQMFMGRPLRVARS 260
>gi|255645618|gb|ACU23303.1| unknown [Glycine max]
Length = 315
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 17/202 (8%)
Query: 140 EESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTV-EIAEVIYNRETD 198
E+ EE + EEEF +L N+P+ E + LFEK G V E+ +Y + +
Sbjct: 72 EQQTEEPLVSEEEF----SRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKK--N 125
Query: 199 RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ---PERAPRVFEPGFR 255
R+RG FV M + EEA +A+ Y+ +GR++ VN A P+ + P P+V F
Sbjct: 126 RNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTAPPPVKPKVV--TFN 183
Query: 256 IYVGNLPWEVDNARLEQVFS-EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++V NL +E + L++ F G+VV+A VVY R G+GFV+ S+ E A+A
Sbjct: 184 LFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRDNPRRPSGYGFVSFKSKKEAEAALAE 243
Query: 315 LDGQNLDGRAIRVNVAEDRQRR 336
G+ GR IRV DR RR
Sbjct: 244 FQGKVFMGRPIRV----DRGRR 261
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARV-VYDRETGRSRGFGFVTMSSETELNDAIA 313
R+ N+PW + +F +HGKV+ + +Y + R+RG FV M S E +A+
Sbjct: 89 RLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKK--NRNRGLAFVEMGSPEEALEALN 146
Query: 314 ALDGQNLDGRAIRVNVAEDRQRRSS 338
L+ +GR I+VN A ++ +++
Sbjct: 147 NLESYEFEGRVIKVNYARPKKEKTA 171
>gi|356515764|ref|XP_003526568.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Glycine
max]
Length = 315
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 17/202 (8%)
Query: 140 EESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTV-EIAEVIYNRETD 198
E+ EE + EEEF +L N+P+ E + LFEK G V E+ +Y + +
Sbjct: 72 EQQTEEPLVSEEEF----SRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKK--N 125
Query: 199 RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ---PERAPRVFEPGFR 255
R+RG FV M + EEA +A+ Y+ +GR++ VN A P+ + P P+V F
Sbjct: 126 RNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTAPPPVKPKVV--TFN 183
Query: 256 IYVGNLPWEVDNARLEQVFS-EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++V NL +E + L++ F G+VV+A VVY R G+GFV+ S+ E A+A
Sbjct: 184 LFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRDNPRRPSGYGFVSFKSKKEAEAALAE 243
Query: 315 LDGQNLDGRAIRVNVAEDRQRR 336
G+ GR IRV DR RR
Sbjct: 244 FQGKVFMGRPIRV----DRGRR 261
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARV-VYDRETGRSRGFGFVTMSSETELNDAIA 313
R+ N+PW + +F +HGKV+ + +Y + R+RG FV M S E +A+
Sbjct: 89 RLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKK--NRNRGLAFVEMGSPEEALEALN 146
Query: 314 ALDGQNLDGRAIRVNVAEDRQRRSS 338
L+ +GR I+VN A ++ +++
Sbjct: 147 NLESYEFEGRVIKVNYARPKKEKTA 171
>gi|300121123|emb|CBK21504.2| unnamed protein product [Blastocystis hominis]
Length = 302
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 12/178 (6%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+ V LP+ D L F++ G + + V+ NRE +SRGFGFVT ++ A+E
Sbjct: 5 KVIVLGLPFSCDDSALYDYFQECGEITDSRVMVNRENKKSRGFGFVTFASEAAFNNALEK 64
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPER-----------APRVFEPGFRIYVGNLPWEVDNAR 269
+ + DGR + V KA R + ++ AP+ F +I + +L W V++
Sbjct: 65 -NGAEFDGRTIKVEKATERPKRDQKENKDRPQHEQAAPKEFIDTNKIIITSLAWSVNDDS 123
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L Q FS++G + V+ DR++G+SRG G V ++E + AI ++G L+GRAI V
Sbjct: 124 LRQAFSKYGNLEECTVLKDRQSGKSRGRGIVRFATEEAMKKAIEEMNGTELEGRAIAV 181
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+ + +L + V+ + L F K G +E V+ +R++ +SRG G V +T E +KA+E
Sbjct: 109 KIIITSLAWSVNDDSLRQAFSKYGNLEECTVLKDRQSGKSRGRGIVRFATEEAMKKAIEE 168
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERA 246
+ +++GR + V + P+ E+A
Sbjct: 169 MNGTELEGRAIAVRQFLPKSQMAEKA 194
>gi|413941709|gb|AFW74358.1| hypothetical protein ZEAMMB73_309849 [Zea mays]
Length = 826
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 123/247 (49%), Gaps = 28/247 (11%)
Query: 103 EEEPNWENQGADETE---GNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPED 159
+ E + ++ DE E GN G GED +AGE + SG + P
Sbjct: 595 DAEAGFSDEAEDEQEWSGGN----GAARGEDLGADAGE--DLSGWARQW--------PRP 640
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+LFV NLP D + L LF GTV E+ + E+ SRG VTM ++ EA A++
Sbjct: 641 RELFVCNLPRRCDVQDLLELFTPHGTVLSVEISRDAESGISRGTASVTMRSLAEARAAID 700
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERA---------PRVFEPGFRIYVGNLPWEVDNARL 270
+D+DGR + V A+ + + +FE ++YVGNL W V L
Sbjct: 701 ALDGFDMDGREVFVKLASDVISNRKNVNLAHITPTKDHIFETPHKVYVGNLAWSVQPQDL 760
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
++F++ G VV+ R++ DR+ GR+R +GF++ SS EL +A+ LD GR I V A
Sbjct: 761 RELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAQELEEAL-KLDRTVFFGRDIVVKEA 819
Query: 331 E-DRQRR 336
+RQ R
Sbjct: 820 HVERQTR 826
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+ V NL ++VD + L FE+ G + V +R++ RSRGFGF+ ST + KA+E
Sbjct: 290 IIVKNLSWNVDDDWLKTEFEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKALETM 349
Query: 222 HRYDIDGRLLTVNK--AAPRGTQPERAPRV----FEPGFRIYVGNLPWEVDNARLEQVFS 275
++DGR + V+K + PR TQ RA + EP I+VGN+ + D L Q F+
Sbjct: 350 QGKEVDGRAIAVDKTESNPRNTQ-ARAAKFGDTPSEPSQTIFVGNVAFSADEDALWQTFA 408
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI-AALDGQNLDGRAIRVNVAEDR 333
++G V + R+ DRETG+ +GF +V + A A +G + GR +R++ ++ R
Sbjct: 409 DYGAVRSVRLPTDRETGQPKGFAYVEFEDQAGATAAFEAGKEGLEIGGRPVRLDYSQPR 467
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
I V NL W VD+ L+ F E G++V+ RV DR++GRSRGFGF+ S+ + A+ +
Sbjct: 290 IIVKNLSWNVDDDWLKTEFEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKALETM 349
Query: 316 DGQNLDGRAIRVNVAEDRQRRS 337
G+ +DGRAI V+ E R +
Sbjct: 350 QGKEVDGRAIAVDKTESNPRNT 371
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 100/182 (54%), Gaps = 6/182 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A +FVG L + +D E L FE G V A VI R TDRSRG+G+V AEKA
Sbjct: 160 EPATIFVGRLSWSIDDEWLKKEFEHIGGVVSARVIMERGTDRSRGYGYVDFEDKSYAEKA 219
Query: 218 VEMFHRYDIDGRLLTVNKAA--PRGTQPERAPRV----FEPGFRIYVGNLPWEVDNARLE 271
++ +IDGR + V+ + P +RA + EP +++GNL + D +
Sbjct: 220 IKEMQGKEIDGREINVDMSTSKPAAGNNDRAKKFGDVPSEPSETLFLGNLSFNADRDAIS 279
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
++FS++G++++ R+ ET + +GFG+V ++ + A+ L G+ +D R +R++ +
Sbjct: 280 ELFSKYGEIISVRIPTHPETEQPKGFGYVQYTNVEDAKKALEGLQGEYIDNRPVRLDYST 339
Query: 332 DR 333
R
Sbjct: 340 PR 341
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 100/182 (54%), Gaps = 13/182 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVG L ++VD E L FE+ G + ++ +RET +S+GFGFV +V+ A KAVE
Sbjct: 3 LFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVEGK 62
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVF-------------EPGFRIYVGNLPWEVDNA 268
+IDGR + ++ R +R P+ EP ++VGN+ ++ +
Sbjct: 63 QGGEIDGRNVRLDFTEGRSQNNQRTPQQRSSDRAGKFGDVPKEPSSTLFVGNVSFDANED 122
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ +VFSE+G + R+ DR+TG +GFG+V M S + A AL G + GR+IR++
Sbjct: 123 MVTEVFSEYGSIKAVRLPTDRDTGALKGFGYVEMFSIDDAKVAFEALQGAEIAGRSIRLD 182
Query: 329 VA 330
+
Sbjct: 183 YS 184
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VG L W VD L + F E G++ + R++ DRETG+S+GFGFV S A+
Sbjct: 3 LFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVEGK 62
Query: 316 DGQNLDGRAIRVNVAEDRQR 335
G +DGR +R++ E R +
Sbjct: 63 QGGEIDGRNVRLDFTEGRSQ 82
>gi|242078001|ref|XP_002443769.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
gi|241940119|gb|EES13264.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
Length = 308
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 116/237 (48%), Gaps = 12/237 (5%)
Query: 111 QGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEP-PEDAKLFVGNLPY 169
+G + E SD E E E R E+ G + + + P +LFV NLP
Sbjct: 73 RGLSDAEAGFSDEAEDEQEWAGGNGAARGEDLGADAGEDLSGWARQWPRPRELFVCNLPR 132
Query: 170 DVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGR 229
D + L LF GTV E+ + ET SRG FVTM ++ EA A+ +++DGR
Sbjct: 133 RCDVQDLLQLFTPHGTVLSVEISRDAETGISRGTAFVTMRSLAEARTAINALDGFELDGR 192
Query: 230 LLTVNKAAPRGTQPERA---------PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ V A+ + + +FE ++YVGNL W V L ++F++ G V
Sbjct: 193 EVFVKLASDVISNRKNVNLAHITPMKDHIFESPHKVYVGNLAWSVQPQDLRELFTQCGTV 252
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA-EDRQRR 336
V+ R++ DR+ GR+R +GF++ SS EL A+ LD GR I V A +RQ R
Sbjct: 253 VSTRLLTDRKGGRNRVYGFLSFSSAEELEAAL-KLDRTVFFGRDIVVKEAIVERQTR 308
>gi|52076130|dbj|BAD46643.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076137|dbj|BAD46650.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|222642112|gb|EEE70244.1| hypothetical protein OsJ_30366 [Oryza sativa Japonica Group]
Length = 611
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 85/147 (57%), Gaps = 14/147 (9%)
Query: 203 FGFVTMSTVEEAEKAVEMF-HRYDIDGR-LLTVNKA------------APRGTQPERAPR 248
FG VTM+TV++ V F R +D LL V A A P
Sbjct: 462 FGVVTMTTVQKPADIVAAFDKRGFLDLHPLLAVEFAEQQPRQEWILTEAALAIAPTTVHS 521
Query: 249 VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
F IYVGNL W+VD RL + F EHG+V+ A+VV DR+TGRSRGFGFV+M++ E
Sbjct: 522 FSPKDFSIYVGNLRWDVDRLRLLKFFGEHGRVLVAQVVCDRQTGRSRGFGFVSMATLREP 581
Query: 309 NDAIAALDGQNLDGRAIRVNVAEDRQR 335
+D IA+L+GQ +DGR +RV+ A+ + R
Sbjct: 582 DDVIASLNGQIMDGRPMRVSFAKWQPR 608
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P+D ++VGNL +DVD +L F + G V +A+V+ +R+T RSRGFGFV+M+T+ E +
Sbjct: 524 PKDFSIYVGNLRWDVDRLRLLKFFGEHGRVLVAQVVCDRQTGRSRGFGFVSMATLREPDD 583
Query: 217 AVEMFHRYDIDGRLLTVN--KAAPR 239
+ + +DGR + V+ K PR
Sbjct: 584 VIASLNGQIMDGRPMRVSFAKWQPR 608
>gi|359806849|ref|NP_001241058.1| uncharacterized protein LOC100776344 [Glycine max]
gi|255634852|gb|ACU17785.1| unknown [Glycine max]
Length = 340
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 98/181 (54%), Gaps = 4/181 (2%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P KLFV L ++ SE L F++ G +E VIY++ T +SRG+GF+T +E ++
Sbjct: 64 PAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIYDKVTGKSRGYGFITFKNMESTQQ 123
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
A+ + IDGRL N A + AP + ++Y+G+L EV + L F+
Sbjct: 124 ALRAPSKL-IDGRLAVCNLACESLSGTSSAPDLSL--RKLYIGSLSPEVTSEILLNYFAR 180
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
HG++ V YDR+T SRGFGFVT + AI L+ + L GR I V A+ ++ +
Sbjct: 181 HGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKKAIDDLE-KTLGGRNIVVKYADSQKGK 239
Query: 337 S 337
+
Sbjct: 240 T 240
>gi|320591904|gb|EFX04343.1| nucleolin protein [Grosmannia clavigera kw1407]
Length = 413
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 98/184 (53%), Gaps = 10/184 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVGNL ++VD L F+ + A VI +RET RSRGFG+V +VE A+ A +
Sbjct: 168 LFVGNLSWNVDDSVLYDEFKGFDGLTGARVITDRETQRSRGFGYVEFDSVEHAQAAFDKM 227
Query: 222 HRYDIDGRLLTV---------NKAAPRGTQPERAPRVFEP-GFRIYVGNLPWEVDNARLE 271
Y +DGR L + N A P ++ ++ V P ++VGNL ++ D +
Sbjct: 228 TGYFLDGRELKIDFSTGRAKSNDANPAASRAKKYGDVTSPESDTLFVGNLSFDADEETVS 287
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
FSE V + R+ D E+GR +GFG+V+ S + A L+GQ+ GR +R++ +
Sbjct: 288 AFFSEVANVKSLRLPTDMESGRPKGFGYVSFYSLEDSKKAFDTLNGQSCAGRNVRLDYST 347
Query: 332 DRQR 335
+ R
Sbjct: 348 PKPR 351
>gi|226533248|ref|NP_001149356.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|195626620|gb|ACG35140.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|414884785|tpg|DAA60799.1| TPA: plastid-specific 30S ribosomal protein 2 [Zea mays]
Length = 251
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 126 PEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGT 185
P V G S V E E V KL+VGN+P V +++L +F GT
Sbjct: 38 PAAAPQVSRRGSALRVSASSAVLEAPEAVA---ARKLYVGNIPRTVTNDELRDMFAAHGT 94
Query: 186 VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA---APR--G 240
VE AEV+Y++ T+RSR FGFVTMST EEA AVE + ++ R + VN P
Sbjct: 95 VERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEALNGTEVGDRKIKVNVTESFLPNIDR 154
Query: 241 TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 300
+ PE + +++YVGNL V L+ FSE G +++A V + T +S+G+GFV
Sbjct: 155 SAPEPEALFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFV 214
Query: 301 TMSSETELNDAIAALD 316
T SSE E+ A+A +
Sbjct: 215 TFSSEEEVEAAVATFN 230
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGN+P V N L +F+ HG V A V+YD+ T RSR FGFVTMS+ E N A+ A
Sbjct: 70 KLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEA 129
Query: 315 LDGQNLDGRAIRVNVAED 332
L+G + R I+VNV E
Sbjct: 130 LNGTEVGDRKIKVNVTES 147
>gi|224035665|gb|ACN36908.1| unknown [Zea mays]
Length = 251
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 126 PEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGT 185
P V G S V E E V KL+VGN+P V +++L +F GT
Sbjct: 38 PAAAPQVSRRGSALRVSASSAVLEAPEAVA---ARKLYVGNIPRTVTNDELRDMFAAHGT 94
Query: 186 VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA---APR--G 240
VE AEV+Y++ T+RSR FGFVTMST EEA AVE + ++ R + VN P
Sbjct: 95 VERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEALNGTEVGDRKIKVNVTESFLPNIDR 154
Query: 241 TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 300
+ PE + +++YVGNL V L+ FSE G +++A V + T +S+G+GFV
Sbjct: 155 SAPEPEALFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFV 214
Query: 301 TMSSETELNDAIAALD 316
T SSE E+ A+A +
Sbjct: 215 TFSSEEEVEAAVATFN 230
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGN+P V N L +F+ HG V A V+YD+ T RSR FGFVTMS+ E N A+ A
Sbjct: 70 KLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEA 129
Query: 315 LDGQNLDGRAIRVNVAED 332
L+G + R I+VNV E
Sbjct: 130 LNGTEVGDRKIKVNVTES 147
>gi|126273923|ref|XP_001387749.1| nuclear localization sequence binding protein [Scheffersomyces
stipitis CBS 6054]
gi|126213619|gb|EAZ63726.1| nuclear localization sequence binding protein, partial
[Scheffersomyces stipitis CBS 6054]
Length = 245
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 20/187 (10%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A LFVG L +++D E L FE G V A VI R T +SRG+G+V + AEKA
Sbjct: 1 EPATLFVGRLSWNIDDEWLRREFEPLGGVISARVIMERATGKSRGYGYVDFDSKSAAEKA 60
Query: 218 VEMFHRYDIDGRLL--------------TVNKAAPRGTQPERAPRVFEPGFRIYVGNLPW 263
+ + ++DGR + T N+A G P P +++GNL +
Sbjct: 61 LNEYQGRELDGRPINLDMSTGKPHVTKSTENRAKQYGDTPS------APSDTLFIGNLSF 114
Query: 264 EVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGR 323
D L +F HG V++ R+ +T + +GFG+V SS E A+ AL+G+ ++GR
Sbjct: 115 NADRDNLFNIFGVHGTVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAAMEALNGEYIEGR 174
Query: 324 AIRVNVA 330
A R++ +
Sbjct: 175 ACRLDFS 181
>gi|356508060|ref|XP_003522779.1| PREDICTED: 30 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 297
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 102/194 (52%), Gaps = 16/194 (8%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEV-IYNRETDRSRGFGF 205
V EEEF +L N+P+ E + LFEK G V E+ +Y + +R+RG F
Sbjct: 62 VVAEEEF----SRTRLLAQNVPWTSTPEDIRSLFEKHGKVLQVELSMYKK--NRNRGLAF 115
Query: 206 VTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG--TQPERAPRVFEPGFRIYVGNLPW 263
V M + EEA +A+ Y+ +GR++ VN A P+ T P P+V F ++V NL +
Sbjct: 116 VEMGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTPPPVKPKVVT--FNLFVANLSY 173
Query: 264 EVDNARLEQVF-SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
E L++ F S GKVV+A VVY R G+GFV+ S+ E A+A G+ G
Sbjct: 174 EASAKDLKEFFDSGTGKVVSAEVVYRDNPRRPSGYGFVSYKSKKEAEAALAEFQGKIFMG 233
Query: 323 RAIRVNVAEDRQRR 336
R IRV DR RR
Sbjct: 234 RPIRV----DRGRR 243
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARV-VYDRETGRSRGFGFVTMSSETELNDAIA 313
R+ N+PW + +F +HGKV+ + +Y + R+RG FV M S E +A+
Sbjct: 72 RLLAQNVPWTSTPEDIRSLFEKHGKVLQVELSMYKK--NRNRGLAFVEMGSPEEALEALN 129
Query: 314 ALDGQNLDGRAIRVNVAEDRQRRS 337
L+ +GR I+VN A ++ ++
Sbjct: 130 NLESYEFEGRVIKVNYARPKKEKT 153
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKA-GTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
LFV NL Y+ ++ L F+ G V AEV+Y R G+GFV+ + +EAE A+
Sbjct: 166 LFVANLSYEASAKDLKEFFDSGTGKVVSAEVVYRDNPRRPSGYGFVSYKSKKEAEAALAE 225
Query: 221 FHRYDIDGRLLTVNKAAPRGTQP 243
F GR + V++ QP
Sbjct: 226 FQGKIFMGRPIRVDRGRRFVQQP 248
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 28/209 (13%)
Query: 150 EEEFVEPPEDAK-------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRG 202
E+E E P+ AK LF G+L + VD L F+ G + A V+ ++ T RSRG
Sbjct: 186 EDEIDEAPKKAKSDDAPMTLFAGSLSWGVDDNALYEAFKSFGNIVSARVVTDKNTGRSRG 245
Query: 203 FGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR------- 255
FG+V E A KA E +IDGR L ++ A + T+ + R + R
Sbjct: 246 FGYVDFGDSESATKAYEAMQGQEIDGRALNLDYANAKPTEGKPQDRAADRAKRHGDTLSA 305
Query: 256 ----IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
++VGNLP++ + + Q FSE +V + R+ D ++G +GFG+VT +S + DA
Sbjct: 306 ESDTLFVGNLPFDTEQDTVRQFFSEVAEVASVRLPTDPDSGNLKGFGYVTFNS---IEDA 362
Query: 312 IAALDGQN-------LDGRAIRVNVAEDR 333
+ALD +N + RA+R++ A R
Sbjct: 363 KSALDAKNGASIGNGRNSRAVRLDFAGSR 391
>gi|255646669|gb|ACU23808.1| unknown [Glycine max]
Length = 125
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 82/128 (64%), Gaps = 5/128 (3%)
Query: 208 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPGFRIYVGNLPWEVD 266
MS +E+ +E + + GR L VN + ++P+ + P E +++VGNL W V
Sbjct: 1 MSCIEDCNAVIENLNGKEFLGRTLRVNFS----SKPKPKEPLYPETEHKLFVGNLSWSVT 56
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
N L Q F E+G VV ARV+YD ETGRSRG+GFV S++ E+ A+AAL+ L+GRA+R
Sbjct: 57 NEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTQAEMEAAVAALNDVELEGRAMR 116
Query: 327 VNVAEDRQ 334
V++A+ ++
Sbjct: 117 VSLAQGKR 124
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P + KLFVGNL + V +E L F++ GTV A V+Y+ ET RSRG+GFV ST E E
Sbjct: 40 PETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTQAEME 99
Query: 216 KAVEMFHRYDIDGRLLTVNKA 236
AV + +++GR + V+ A
Sbjct: 100 AAVAALNDVELEGRAMRVSLA 120
>gi|212722626|ref|NP_001131649.1| uncharacterized protein LOC100193009 [Zea mays]
gi|194692152|gb|ACF80160.1| unknown [Zea mays]
Length = 314
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 119/237 (50%), Gaps = 12/237 (5%)
Query: 111 QGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFV-EPPEDAKLFVGNLPY 169
+G + E SD E E E + R E+ G + + + + P +LFV NLP
Sbjct: 79 RGWSDAEAGFSDEAEDEQEWSGGNGAARGEDLGADAGEDLSGWARQWPRPRELFVCNLPR 138
Query: 170 DVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGR 229
D + L LF GTV E+ + E+ SRG VTM ++ EA A++ +D+DGR
Sbjct: 139 RCDVQDLLELFTPHGTVLSVEISRDAESGISRGTASVTMRSLAEARAAIDALDGFDMDGR 198
Query: 230 LLTVNKAAPRGTQPERA---------PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ V A+ + + +FE ++YVGNL W V L ++F++ G V
Sbjct: 199 EVFVKLASDVISNRKNVNLAHITPTKDHIFETPHKVYVGNLAWSVQPQDLRELFTQCGTV 258
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE-DRQRR 336
V+ R++ DR+ GR+R +GF++ SS EL +A+ LD GR I V A +RQ R
Sbjct: 259 VSTRLLTDRKGGRNRVYGFLSFSSAQELEEAL-KLDRTVFFGRDIVVKEAHVERQTR 314
>gi|428170953|gb|EKX39874.1| hypothetical protein GUITHDRAFT_154318 [Guillardia theta CCMP2712]
Length = 270
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 99/184 (53%), Gaps = 15/184 (8%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
++F+G LP+ + + +FE G +E E+ N ++ R GFGF+T + KAV M
Sbjct: 26 RVFLGGLPFKATEKDIKKMFESCGAIENIELPMNADS-RPAGFGFLTFKDADSVAKAVAM 84
Query: 221 FHRYDIDGRLLTVNKAAPRGTQ---------PERAPRVFEPGFR-IYVGNLPWEVDNARL 270
++ GR + V +A GT+ P R P+ G I++GNL W+VD +
Sbjct: 85 -DGQELMGRWVKVKEA--DGTEGSAGKKPFTPNREPKPKPDGCTTIFMGNLSWDVDEDTI 141
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
F++ G+VVN R DRETG +GFG V +E+ D A G+ + GRAIRV+ A
Sbjct: 142 RSFFADCGEVVNVRFATDRETGDFKGFGHVQF-AESSATDLAVAKGGEFVAGRAIRVDFA 200
Query: 331 EDRQ 334
EDR+
Sbjct: 201 EDRK 204
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 14/195 (7%)
Query: 154 VEPPE--DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTV 211
V+ PE A LFVGNL ++VD E L FE+ G + ++ +RE+ RSRGFG+V V
Sbjct: 230 VDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELAGTRIVTDRESGRSRGFGYVEFVNV 289
Query: 212 EEAEKAVEMFHRYDIDGRLLTVN--------KAAPRGTQPERAP----RVFEPGFRIYVG 259
E+A KA ++DGR + ++ A PR RA + +++G
Sbjct: 290 EDAVKAHTAKKDAELDGRKMNLDYANARTNGNANPRERADNRAKSFGDQTSPESDTLFIG 349
Query: 260 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 319
N+ + D ++++FS++G + R+ D E+GR +GFG+V SS E A+ A G +
Sbjct: 350 NISFSADENMVQELFSKYGAIQGIRLPTDPESGRPKGFGYVQFSSVDEARAALEAEHGAD 409
Query: 320 LDGRAIRVNVAEDRQ 334
L GR+IR++ + RQ
Sbjct: 410 LGGRSIRLDFSTPRQ 424
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 12/185 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL +V + LFE+ G V A VI E +SRGFGFV T EEA+KAVE
Sbjct: 231 IYVKNLDPEVTQDDFVKLFEQFGNVTSA-VIQTDEQGQSRGFGFVNFETHEEAQKAVETL 289
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
H + GR L V++A + + E + +E G +Y+ NL ++D+ RL
Sbjct: 290 HDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKYQGVNLYIKNLEDDIDDERLR 349
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
Q F G + +A+V+ D E G S+GFGFV SS E A+A ++ + + + + V++A+
Sbjct: 350 QEFEPFGSITSAKVMRD-EKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQ 408
Query: 332 DRQRR 336
R+ R
Sbjct: 409 RREVR 413
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG L V L +F G V V + T RS G+ +V + E+A+E
Sbjct: 44 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 103
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHG 278
+ I GR A R +R P + + G I++ NL ++DN L F+ G
Sbjct: 104 QLNYSLIKGR-------ACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFG 156
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN-----VAEDR 333
V++ +V D E GRS+G+GFV + AI A++G L+ + + V A R
Sbjct: 157 NVLSCKVATD-EHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSR 215
Query: 334 QRRSSF 339
+R+S
Sbjct: 216 ERQSKL 221
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG L V A L ++F+ G V + RV D T RS G+ +V + + A
Sbjct: 42 PSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERA 101
Query: 312 IAALDGQNLDGRAIRV 327
+ L+ + GRA R+
Sbjct: 102 LEQLNYSLIKGRACRI 117
>gi|367006051|ref|XP_003687757.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
gi|357526062|emb|CCE65323.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
Length = 416
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 100/185 (54%), Gaps = 8/185 (4%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E E A +FVG L + +D E L F+ G V A V+ R TDRSRG+G+V S
Sbjct: 151 TEEGEPATIFVGRLSWSIDDEWLKNEFDHIGGVIGARVMLERGTDRSRGYGYVDFSDKSY 210
Query: 214 AEKAVEMFHRYDIDGRLLTVN----KAAPRGTQPERAPRV----FEPGFRIYVGNLPWEV 265
AEKA++ H +IDGR + + K A +RA + EP +++GNL +
Sbjct: 211 AEKAIKEMHGKEIDGREINCDMSTSKPAGSNNGADRAKKFGDIPSEPSETLFLGNLSFNA 270
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
D + ++FS+ G++V+ R+ ET + +GFG+V + + A+ AL G+ +D R +
Sbjct: 271 DRDSIWEMFSKFGEIVSVRLPTHPETEQPKGFGYVQYGNIDDAKKALEALQGEYIDNRPV 330
Query: 326 RVNVA 330
R++ +
Sbjct: 331 RLDYS 335
>gi|302835614|ref|XP_002949368.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
gi|300265195|gb|EFJ49387.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
Length = 340
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 90/171 (52%), Gaps = 7/171 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
AKLF+G L +D EKL F K G V V+ +R+T R RGFGF+T + + A
Sbjct: 61 AKLFLGGLSWDTTEEKLKEYFLKYGEVHDVVVMRDRQTRRPRGFGFITFT--DPAAAQAA 118
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
+ IDGR + + P G ++ PR +I+VG L + ++ L+Q F ++G
Sbjct: 119 CAESHTIDGRQIDAKPSVPHGEGGQQ-PR----SKKIFVGGLAPDTEDVHLKQYFEQYGT 173
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
VV A V+ D +GRSRGFGFVT E+ + AA L G+ + V A
Sbjct: 174 VVEALVMVDHNSGRSRGFGFVTFGEESSVEKVFAAGQMHELGGKQVEVKSA 224
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
+ P K+FVG L D + L FE+ GTV A V+ + + RSRGFGFVT
Sbjct: 143 QQPRSKKIFVGGLAPDTEDVHLKQYFEQYGTVVEALVMVDHNSGRSRGFGFVTFGEESSV 202
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGT 241
EK +++ G+ + V A P+G+
Sbjct: 203 EKVFAAGQMHELGGKQVEVKSATPKGS 229
>gi|296089011|emb|CBI38714.3| unnamed protein product [Vitis vinifera]
Length = 166
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 92/165 (55%), Gaps = 12/165 (7%)
Query: 179 LFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN---- 234
+F+ GTV+ EV N ET SRG G+VTMS++ EA+ A+ D+ GR + V
Sbjct: 1 MFKPHGTVQSIEVCRNAETGVSRGSGYVTMSSMREAKAAIAALDGSDVGGREMRVRFSTD 60
Query: 235 ------KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYD 288
+ + P R +FE +++YVGNL W + L FS+ G VV+ARVV+D
Sbjct: 61 MNFRRRNSEALNSAPMR-NLIFESPYKLYVGNLAWAIKPEDLRNHFSQFGTVVSARVVHD 119
Query: 289 RETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
R+ G+ R +GF++ SS E A+ +L+G+ GR++ V+ R
Sbjct: 120 RKAGKHRAYGFLSFSSAAECEAAM-SLNGKEFRGRSLVVSAGMKR 163
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
+F HG V + V + ETG SRG G+VTMSS E AIAALDG ++ GR +RV + D
Sbjct: 1 MFKPHGTVQSIEVCRNAETGVSRGSGYVTMSSMREAKAAIAALDGSDVGGREMRVRFSTD 60
Query: 333 R--QRRSS 338
+RR+S
Sbjct: 61 MNFRRRNS 68
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+VGNL + + E L F + GTV A V+++R+ + R +GF++ S+ E E A+ +
Sbjct: 86 KLYVGNLAWAIKPEDLRNHFSQFGTVVSARVVHDRKAGKHRAYGFLSFSSAAECEAAMSL 145
Query: 221 FHRYDIDGRLLTVNKAAPR 239
+ + GR L V+ R
Sbjct: 146 NGK-EFRGRSLVVSAGMKR 163
>gi|255549774|ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223544843|gb|EEF46358.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 608
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 14/186 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+V NL D+ + +F G + I+ VI +SRGFGFV + E+A+KAV+
Sbjct: 201 LYVKNLSKDMTQDAFHNMFSAFGEI-ISAVIMQDHNGKSRGFGFVDFESPEDAKKAVDAL 259
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF----------RIYVGNLPWEVDNARLE 271
+ Y ++ R L V +A + + + ++ F +YV NL +DN +L+
Sbjct: 260 NGYQLESRTLFVGRAQAKAERKKILQHEYKDIFNTHMEKFKASNLYVKNLALCIDNDKLQ 319
Query: 272 QVFSEHGKVVNARVV-YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
++FS GK+V+A+V+ YD G SRGFGFV SS E A+ AL+G G+++ V +A
Sbjct: 320 ELFSCSGKIVSAKVMRYD--NGASRGFGFVCFSSPEEAKKALNALNGAVFQGKSLYVAMA 377
Query: 331 EDRQRR 336
+ ++ R
Sbjct: 378 QCKRDR 383
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 10/185 (5%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
+P L+VG+L +V L +F G + + T RS +G+V +A
Sbjct: 14 DPRPRLSLYVGDLDPEVTEMNLRTVFSSMGPIRNVHLCRCSLTGRSLCYGYVNFYRPYDA 73
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQV 273
KA+ + + G+L+ R +R P + G +YV NL +D+A L+ +
Sbjct: 74 YKALSNLNHTYLKGKLM-------RIMWCQRNPCARKSGIGNLYVKNLDASIDSAGLQSL 126
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FS+ G +++ +VV E G+S+G+GFV SE A AL L + + V+ +
Sbjct: 127 FSKFGTILSCKVV--EEHGKSKGYGFVQFDSEDSALAARTALHDTMLKEKKLYVSRFVKK 184
Query: 334 QRRSS 338
R++
Sbjct: 185 SERTT 189
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 129 EDTVVEAGERQEESGEEGVFEEE------EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEK 182
E + G Q ++ + + + E +E + + L+V NL +D++KL LF
Sbjct: 265 ESRTLFVGRAQAKAERKKILQHEYKDIFNTHMEKFKASNLYVKNLALCIDNDKLQELFSC 324
Query: 183 AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 236
+G + A+V+ + SRGFGFV S+ EEA+KA+ + G+ L V A
Sbjct: 325 SGKIVSAKVM-RYDNGASRGFGFVCFSSPEEAKKALNALNGAVFQGKSLYVAMA 377
>gi|449547299|gb|EMD38267.1| hypothetical protein CERSUDRAFT_113433 [Ceriporiopsis subvermispora
B]
Length = 679
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 102/185 (55%), Gaps = 12/185 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V N+ +V E+ LFE+ G V A VI E RS+GFGFV EEA+K VE
Sbjct: 231 VYVKNIDAEVTDEEFRQLFEQFGNVTSA-VIQRDEEGRSKGFGFVNFEKHEEAQKGVESL 289
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
H ++++G+ L V +A + + E + +E G +Y+ NL EVD+ RL
Sbjct: 290 HDFELNGKKLFVTRAQKKAEREEELRKSYEQAKNEKLSKYQGVNLYIKNLEDEVDDERLR 349
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
Q F G + +A+V+ D E G S+GFGFV SS E A+A ++ + + + + V++A+
Sbjct: 350 QEFEPFGTITSAKVMRD-EKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQ 408
Query: 332 DRQRR 336
R+ R
Sbjct: 409 RREVR 413
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VG L V L +F G V V + T RS G+ +V + E+A+E
Sbjct: 50 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQL 109
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ I GR A R +R P + + G I++ NL +DN L F+ G V
Sbjct: 110 NYSLIKGR-------ACRIMWSQRDPALRKTGQGNIFIKNLDEGIDNKALHDTFAAFGNV 162
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
++ +V D E GRS+G+GFV + + AI A++G L+ + + V R+ R S
Sbjct: 163 LSCKVATD-EHGRSKGYGFVHYETAEAADTAIKAVNGMLLNDKKVYVGPHISRKERQS 219
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G V +V + E RS+G+GFV T E A+ A++
Sbjct: 138 IFIKNLDEGIDNKALHDTFAAFGNVLSCKVATD-EHGRSKGYGFVHYETAEAADTAIKA- 195
Query: 222 HRYDIDGRLLTVNK--AAPRGTQPERAPRVFEPGFR---IYVGNLPWEVDNARLEQVFSE 276
++G LL K P ++ ER ++ E + +YV N+ EV + Q+F +
Sbjct: 196 ----VNGMLLNDKKVYVGPHISRKERQSKIEEMKAQFTNVYVKNIDAEVTDEEFRQLFEQ 251
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
G V +A + D E GRS+GFGFV E + +L L+G+ + V A+ + R
Sbjct: 252 FGNVTSAVIQRDEE-GRSKGFGFVNFEKHEEAQKGVESLHDFELNGKKLFVTRAQKKAER 310
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ L++ NL +VD E+L FE GT+ A+V+ + E S+GFGFV S+ +EA KA
Sbjct: 330 QGVNLYIKNLEDEVDDERLRQEFEPFGTITSAKVMRD-EKGSSKGFGFVCFSSPDEATKA 388
Query: 218 VEMFHRYDIDGRLLTVNKAAPR 239
V + I + L V+ A R
Sbjct: 389 VAEMNNKMIGTKPLYVSLAQRR 410
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 99/176 (56%), Gaps = 7/176 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LFVG+L ++VD + L F+ G V A VI +RET RS+GFG+V ++ +AEKA
Sbjct: 253 ATLFVGSLSWNVDDDMLKEEFKFCGEVVSARVITDRETGRSKGFGYVDFASPADAEKAHA 312
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-------RIYVGNLPWEVDNARLEQ 272
IDGR + V+ + + + A R + G ++VGNLP++ D + +
Sbjct: 313 EKQGAFIDGRQIKVDFSTGKSNNNDSADRAKKFGDVTSPESDTLFVGNLPFDADEDVVSE 372
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
F ++ + R+ D+E+GR +GFG+V+ +S + A L GQ+++GR R++
Sbjct: 373 FFGSVAEIKSLRLPTDQESGRRKGFGYVSFNSVEDAKSAFTQLSGQSINGRPCRLD 428
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
V PE LFVGNLP+D D + ++ F ++ + ++E+ R +GFG+V+ ++VE+
Sbjct: 348 VTSPESDTLFVGNLPFDADEDVVSEFFGSVAEIKSLRLPTDQESGRRKGFGYVSFNSVED 407
Query: 214 AEKAVEMFHRYDIDGRLLTVNKAAPR 239
A+ A I+GR ++ + P+
Sbjct: 408 AKSAFTQLSGQSINGRPCRLDYSTPK 433
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 148
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 65/82 (79%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R++VG LPW + L+QVFS++G+VV+ARVV DRETGRSRGFGF++ + + +++ IAA
Sbjct: 6 RVFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDECIAA 65
Query: 315 LDGQNLDGRAIRVNVAEDRQRR 336
LDGQ+L GR IRVN A R++R
Sbjct: 66 LDGQDLQGRTIRVNKAMTREQR 87
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
ED ++FVG LP+ + E L +F K G V A V+ +RET RSRGFGF++ + ++
Sbjct: 2 SEDNRVFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDE 61
Query: 217 AVEMFHRYDIDGRLLTVNKAAPR 239
+ D+ GR + VNKA R
Sbjct: 62 CIAALDGQDLQGRTIRVNKAMTR 84
>gi|238879474|gb|EEQ43112.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 399
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A LFVG L +++D L FE G V A VI R T +SRG+G+V + AEKA
Sbjct: 166 EPATLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKA 225
Query: 218 VEMFHRYDIDGRLLTVNKAA--PRGTQP--ERAPRVFE----PGFRIYVGNLPWEVDNAR 269
+E +IDGR + ++ + P ++ +RA + + P +++GNL + +
Sbjct: 226 LEEMQGKEIDGRPINLDMSTGKPHASKSNNDRAKQYGDSQSPPSDTLFIGNLSFNANRDN 285
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L VF E+G V++ RV +T + +GFG+V SS E A+ A++G+ ++GR R++
Sbjct: 286 LFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEAMNGEYIEGRPCRLDF 345
Query: 330 AEDR 333
+ R
Sbjct: 346 STPR 349
>gi|68473894|ref|XP_719050.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|68474099|ref|XP_718946.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440741|gb|EAL00044.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440849|gb|EAL00151.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
Length = 400
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A LFVG L +++D L FE G V A VI R T +SRG+G+V + AEKA
Sbjct: 166 EPATLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKA 225
Query: 218 VEMFHRYDIDGRLLTVNKAA--PRGTQP--ERAPRVFE----PGFRIYVGNLPWEVDNAR 269
+E +IDGR + ++ + P ++ +RA + + P +++GNL + +
Sbjct: 226 LEEMQGKEIDGRPINLDMSTGKPHASKSNNDRAKQYGDSQSPPSDTLFIGNLSFNANRDN 285
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L VF E+G V++ RV +T + +GFG+V SS E A+ A++G+ ++GR R++
Sbjct: 286 LFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEAMNGEYIEGRPCRLDF 345
Query: 330 AEDR 333
+ R
Sbjct: 346 STPR 349
>gi|440802763|gb|ELR23692.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 425
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 94/190 (49%), Gaps = 13/190 (6%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEV--IYNRETDRSRGFGFVTMSTVE 212
E P +A F+GNLP+ + + + FE G + V I +R+T R +GFG++ S +
Sbjct: 175 ETPSNANFFIGNLPWSAEEDTVKQFFESQGVSAVYAVRLITDRDTGRKKGFGYIETSASD 234
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKA------APRGTQPERAPRVFEPGF---RIYVGNLPW 263
AV + D +GR L V+KA A R T+P APR +++GNL +
Sbjct: 235 V--DAVLALNGADFEGRELKVDKANERPANADRDTKPRDAPRQSGEAATDGNVFLGNLSF 292
Query: 264 EVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGR 323
+ + G V R+VYDRET R RGFG+ N AIAA ++DGR
Sbjct: 293 NSTEDSIWAALEQFGTVKAVRIVYDRETQRPRGFGYCEFEDADTANKAIAASGTVDVDGR 352
Query: 324 AIRVNVAEDR 333
IR++ A R
Sbjct: 353 QIRIDTATAR 362
>gi|354544201|emb|CCE40924.1| hypothetical protein CPAR2_109610 [Candida parapsilosis]
Length = 475
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 103/184 (55%), Gaps = 8/184 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A +F G L +++D + L FE V A VI R T +SRG+G+V ++ AEKA
Sbjct: 233 EPATVFAGRLSWNIDDDWLKREFEHLEGVIGARVIMERATGKSRGYGYVDFTSKAAAEKA 292
Query: 218 VEMFHRYDIDGRLLTVNKAA--PRGTQP--ERAPRVFE----PGFRIYVGNLPWEVDNAR 269
+E +IDGR + ++ + P T+P +RA + + P +++GNL + + +
Sbjct: 293 IEEMQGREIDGRPINLDLSTGRPHATKPNNDRAKQFGDQQSPPSDTLFIGNLSFNANRDK 352
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L ++F E+G V++ R+ +T + +GFG+V S E A+ AL+G+ L+GR R++
Sbjct: 353 LFEIFGEYGNVISCRLPTHPDTQQPKGFGYVQFGSVDEAKAALEALNGEYLEGRPCRLDF 412
Query: 330 AEDR 333
+ R
Sbjct: 413 SAPR 416
>gi|195123564|ref|XP_002006275.1| GI18654 [Drosophila mojavensis]
gi|193911343|gb|EDW10210.1| GI18654 [Drosophila mojavensis]
Length = 645
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 105/196 (53%), Gaps = 17/196 (8%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E AKLF V N D D EKL FE G + +V+ ++E +S+GFGFV T E
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAYETTEA 235
Query: 214 AEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLP 262
AE AV+ + D+ DG+ L V +A + + + R FE G +YV NL
Sbjct: 236 AEAAVQALNGKDMGDGKTLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLD 295
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+D+ RL + FS +G + +A+V+ D E GRS+GFGFV S E A+ L+G+ +
Sbjct: 296 DSIDDERLRKEFSLYGTITSAKVMTDEE-GRSKGFGFVCFISPNEATCAVTELNGRVIGS 354
Query: 323 RAIRVNVAEDRQRRSS 338
+ + V +A+ ++ R +
Sbjct: 355 KPLYVALAQRKEERKA 370
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L D++ L F AG V V + T RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ +D+ + R +R P + G +++ NL +DN + FS G
Sbjct: 62 TMN-FDL------IRDKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +V D E G S+G+GFV +E N +I ++G L+G+ + V R+ R
Sbjct: 115 NILSCKVATD-EKGTSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKER 171
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 103/187 (55%), Gaps = 12/187 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LF GNL ++VD E L FE+ G + ++ +RE+ RSRGFG+V + VE+A KA
Sbjct: 238 ANLFAGNLSWNVDEEWLRSEFEEFGELVGTRIVTDRESGRSRGFGYVEFANVEDAVKAHA 297
Query: 220 MFHRYDIDGRLLTVN--------KAAPRGTQPERAP----RVFEPGFRIYVGNLPWEVDN 267
++DGR L ++ A PR RA + +++GN+ + D
Sbjct: 298 AKKDVELDGRKLNLDFANARANGNANPRERADNRAKSFGDQTSPESDTLFIGNISFSADE 357
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+ ++++FS++G + R+ D E+GR +GFG+V SS E A+ A G +L GR+IR+
Sbjct: 358 SMVQELFSKYGSIQGIRLPTDPESGRPKGFGYVQFSSVDEARAAMEAEHGADLGGRSIRL 417
Query: 328 NVAEDRQ 334
+ + +Q
Sbjct: 418 DYSTPKQ 424
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 10/185 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A LFVG L +++D L FE G V A VI R T +SRG+G+V T AEKA
Sbjct: 194 EPATLFVGRLSWNIDDSWLKREFEHIGGVISARVIMERATGKSRGYGYVDFETKSAAEKA 253
Query: 218 VEMFHRYDIDGRLLTVNKA-----APRGTQPERAPRVFEP----GFRIYVGNLPWEVDNA 268
+E +IDGR + ++ + A R T +RA + + ++VGNL + +
Sbjct: 254 LEEMQGKEIDGRPINLDMSTGKPHASRSTN-DRAKQYGDSQSALSDTLFVGNLSFNANRD 312
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
L VF E+G V++ RV +T + +GFG+V SS E A+ AL+G+ ++GR R++
Sbjct: 313 NLFTVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYIEGRPCRLD 372
Query: 329 VAEDR 333
+ R
Sbjct: 373 FSTPR 377
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 60/78 (76%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LEQ FS++G+VV ++++ DRETGRSRGFGFVT S+E +NDAI
Sbjct: 8 YRCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKSMNDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F + G V +++I +RET RSRGFGFVT S + A+E
Sbjct: 9 RCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKSMNDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQNLDGRNITVNEA 84
>gi|294897114|ref|XP_002775830.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239882183|gb|EER07646.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 323
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 101/182 (55%), Gaps = 20/182 (10%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+LFVG +P + + F + G VE A V+ ++ T R RGFGFVT ST +E E +
Sbjct: 79 QLFVGGIPEGITDDGFHQYFSQFGHVERAIVMTDKMTGRCRGFGFVTYSTTDEVEVVIMK 138
Query: 221 FHRYDIDGRLLTVNKA------------APRGTQPERAPRVFEPGFRIYVGNLPWEVDNA 268
+ ++G+ + VN++ + R P R R + +++ G L + +
Sbjct: 139 GGPHQLNGKRVDVNRSQDPKDPHRGGWGSDRSGGPSR--RGGDDPMKVFCGGLQSTLSSE 196
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI-AALDGQNL-DGRAIR 326
RL Q FS++G +V+ + DR+TGRS+G+GFVT SE DA+ AA++G N+ DGR +R
Sbjct: 197 RLRQHFSQYGNIVDCIAMRDRDTGRSKGYGFVTFDSE----DAVAAAINGNNMIDGRWVR 252
Query: 327 VN 328
+
Sbjct: 253 TS 254
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG +P + + Q FS+ G V A V+ D+ TGR RGFGFVT S+ E+ I
Sbjct: 79 QLFVGGIPEGITDDGFHQYFSQFGHVERAIVMTDKMTGRCRGFGFVTYSTTDEVEVVIMK 138
Query: 315 LDGQNLDGRAIRVNVAED 332
L+G+ + VN ++D
Sbjct: 139 GGPHQLNGKRVDVNRSQD 156
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 101/181 (55%), Gaps = 5/181 (2%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E +++VG L ++VD+E L E G V A V +R T +SRGFG+V +T A+KA
Sbjct: 201 ETNQIWVGQLSWNVDNEWLKSEMEAFGEVTSARVQLDRTTGKSRGFGYVDFATAAAAKKA 260
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE-----PGFRIYVGNLPWEVDNARLEQ 272
E ++DGR + ++ + P+G + + F P +++GNL +++ +
Sbjct: 261 FEEGQGKEVDGRAIRIDLSTPKGDVTDNRAKKFNDQRSAPSSTLFIGNLSFDISEDDVWN 320
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
FSEHG+V R+ D ++GR +GFG+V +++ AI A+ GQ L GR +R++ +
Sbjct: 321 AFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAIDAMTGQELAGRPLRLDFSTP 380
Query: 333 R 333
R
Sbjct: 381 R 381
>gi|346322022|gb|EGX91621.1| ribosome biogenesis protein Nop4 [Cordyceps militaris CM01]
Length = 818
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 106/182 (58%), Gaps = 12/182 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFV +LP +V +E LA F + V+ A V+ +++T SRGFGFVT++ ++A++A +
Sbjct: 44 LFVRSLPPNVTNESLAEFFSEYFPVKHATVVVDQQTKESRGFGFVTLADADDAKQAQTVL 103
Query: 222 HRYDIDGRLLTVNKAAPR-------GTQPERAPRV--FEPGFRIYVGNLPWEVDNA-RLE 271
+ +GR + V A PR G + + P FEP ++ V NLPW + N+ +L
Sbjct: 104 DKKQWEGRSIRVEVAEPRQRKELAEGAERRQKPGKPEFEPTPKLIVRNLPWSIRNSEQLG 163
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+F +G++ A + D+ G+ +GFGFVT+ + +A+ ++G+ +DGR + V+ A
Sbjct: 164 HLFRSYGRIKFADLPKDK--GKLKGFGFVTLRGKKNAENALEGVNGKEIDGRTLAVDWAV 221
Query: 332 DR 333
D+
Sbjct: 222 DK 223
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++V +LP V N L + FSE+ V +A VV D++T SRGFGFVT++ + A L
Sbjct: 44 LFVRSLPPNVTNESLAEFFSEYFPVKHATVVVDQQTKESRGFGFVTLADADDAKQAQTVL 103
Query: 316 DGQNLDGRAIRVNVAEDRQRR 336
D + +GR+IRV VAE RQR+
Sbjct: 104 DKKQWEGRSIRVEVAEPRQRK 124
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 124 GEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDV-DSEKLAMLFEK 182
EP + E ER+++ G+ EF P KL V NLP+ + +SE+L LF
Sbjct: 118 AEPRQRKELAEGAERRQKPGKP------EFEPTP---KLIVRNLPWSIRNSEQLGHLFRS 168
Query: 183 AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 241
G ++ A++ ++ + +GFGFVT+ + AE A+E + +IDGR L V+ A + T
Sbjct: 169 YGRIKFADLP--KDKGKLKGFGFVTLRGKKNAENALEGVNGKEIDGRTLAVDWAVDKST 225
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 23/102 (22%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE-- 219
+FV NLP+ + EKL F G + A V+ ++ TDR G FV E+A+ ++
Sbjct: 319 IFVRNLPFTTNDEKLKSFFSSFGNIRYARVVMDKATDRPAGTAFVCFFEGEDAKACIKGA 378
Query: 220 -------------MFH--------RYDIDGRLLTVNKAAPRG 240
+ H +Y +DGRLL++ +A R
Sbjct: 379 PRGQEPATSGKKSILHDDNLDPTGKYTLDGRLLSIAQAVNRA 420
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
I+V NLP+ ++ +L+ FS G + ARVV D+ T R G FV E DA A +
Sbjct: 319 IFVRNLPFTTNDEKLKSFFSSFGNIRYARVVMDKATDRPAGTAFVCF---FEGEDAKACI 375
Query: 316 DG 317
G
Sbjct: 376 KG 377
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 100/180 (55%), Gaps = 7/180 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA L++GNL VD + L LF + G V V ++ T +G+GFV + +A+ A
Sbjct: 27 QDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFTNEVDADYA 86
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ L +NK+A + R F+ G I++GNL +VD + FS
Sbjct: 87 LKLMNMVKLYGKSLRLNKSA-------QDRRNFDVGANIFLGNLDPDVDEKTIYDTFSTF 139
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
G ++ A+++ D ETG SRGFGFV+ + + A+AA++GQ + R I V+ A + R
Sbjct: 140 GNILTAKIMRDPETGISRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRG 199
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A +F+GNL DVD + + F G + A+++ + ET SRGFGFV+ T E ++ A+
Sbjct: 116 ANIFLGNLDPDVDEKTIYDTFSTFGNILTAKIMRDPETGISRGFGFVSFDTFEASDAALA 175
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVD 266
+ I R + V+ A + T+ ER E R+ N P ++
Sbjct: 176 AMNGQFICNRPIHVSYAYKKDTRGERHGSAAE---RLLAANRPQIIN 219
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 7/180 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA L++GNL VD + L LF + G V V ++ T +G+GFV +A+ A
Sbjct: 27 QDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYA 86
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ L +NK+A + R F+ G +++GNL +VD + FS
Sbjct: 87 LKLMNMVKLYGKALRLNKSA-------QDRRNFDVGANVFLGNLDPDVDEKTIYDTFSAF 139
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
G +++A+++ D ETG SRGFGFV+ + + A+AA++GQ + R I V+ A + R
Sbjct: 140 GNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRG 199
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A +F+GNL DVD + + F G + A+++ + ET SRGFGFV+ T E ++ A+
Sbjct: 116 ANVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALA 175
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER 245
+ I R + V+ A + T+ ER
Sbjct: 176 AMNGQFICNRPIHVSYAYKKDTRGER 201
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 62/78 (79%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W DN LE+ FS++G++V+++++ DRETGRSRGFGFVT ++E +NDAI
Sbjct: 6 YRCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDAIE 65
Query: 314 ALDGQNLDGRAIRVNVAE 331
A++GQ+LDGR I VN A+
Sbjct: 66 AMNGQDLDGRNITVNQAQ 83
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D+E L F + G + +++I +RET RSRGFGFVT + + A+E
Sbjct: 7 RCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDAIEA 66
Query: 221 FHRYDIDGRLLTVNKA 236
+ D+DGR +TVN+A
Sbjct: 67 MNGQDLDGRNITVNQA 82
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 7/180 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA L++GNL VD + L LF + G V V ++ T +G+GFV +A+ A
Sbjct: 27 QDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYA 86
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ L +NK+A + R F+ G +++GNL +VD + FS
Sbjct: 87 LKLMNMVKLYGKALRLNKSA-------QDRRNFDVGANVFLGNLDPDVDEKTIYDTFSAF 139
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
G +++A+++ D ETG SRGFGFV+ + + A+AA++GQ + R I V+ A + R
Sbjct: 140 GNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRG 199
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A +F+GNL DVD + + F G + A+++ + ET SRGFGFV+ T E ++ A+
Sbjct: 116 ANVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALA 175
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER 245
+ I R + V+ A + T+ ER
Sbjct: 176 AMNGQFICNRPIHVSYAYKKDTRGER 201
>gi|323348433|gb|EGA82678.1| Nsr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 254
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 154 VEPPEDAKLF-VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVE 212
++ P++ LF + + + +D E L FE G V A VIY R TDRSRG+G+V
Sbjct: 1 MKKPKNQLLFSLVDYTWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKS 60
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKAA--PRGTQPERAPRV----FEPGFRIYVGNLPWEVD 266
AEKA++ +IDGR + + + P G +RA + EP +++GNL + D
Sbjct: 61 YAEKAIQEMQGKEIDGRPINCDMSTSKPAGNN-DRAKKFGDTPSEPSDTLFLGNLSFNAD 119
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
+ ++F++HG+VV+ R+ ET + +GFG+V S+ + A+ AL G+ +D R +R
Sbjct: 120 RDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVR 179
Query: 327 VNVAEDR 333
++ + R
Sbjct: 180 LDFSSPR 186
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 7/180 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA L++GNL VD + L LF + G V V ++ T +G+GFV +A+ A
Sbjct: 27 QDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADYA 86
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ L +NK+A + R F+ G +++GNL +VD + FS
Sbjct: 87 LKLMNMVKLYGKALRLNKSA-------QDRRNFDVGANVFLGNLDPDVDEKTIYDTFSAF 139
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
G +++A+++ D ETG SRGFGFV+ + + A+AA++GQ + R I V+ A + R
Sbjct: 140 GNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRG 199
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A +F+GNL DVD + + F G + A+++ + ET SRGFGFV+ T E ++ A+
Sbjct: 116 ANVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALA 175
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER 245
+ I R + V+ A + T+ ER
Sbjct: 176 AMNGQFICNRPIHVSYAYKKDTRGER 201
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 25/198 (12%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P A LFVGNL ++VD L FE G + ++ R+T RSRGFG+V + +A
Sbjct: 283 PGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAA 342
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR-------------------- 255
KA E +IDGR++ ++ A R ++ + GF+
Sbjct: 343 KAFEAKKGAEIDGRVINLDYATGRPANKDQ-----QGGFKDRANARARSFGDQASPESDT 397
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VGNLP++ + + ++F E G ++ R+ D ++GR +GFG+V SS E A L
Sbjct: 398 LFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNEL 457
Query: 316 DGQNLDGRAIRVNVAEDR 333
G +L GR +R++ + R
Sbjct: 458 QGADLLGRPVRLDFSTPR 475
>gi|495594|gb|AAA70421.1| poly(A)-binding protein [Drosophila melanogaster]
Length = 632
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 17/196 (8%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E AKLF V N D D EKL FE G + +V+ ++E +S+GFGFV T E
Sbjct: 175 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEA 233
Query: 214 AEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLP 262
AE AV+ + D+ +G+ L V +A + + + R FE G +YV NL
Sbjct: 234 AEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLD 293
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+D+ RL FS +G + +A+V+ D E GRS+GFGFV + E+E A+ L+G+ +
Sbjct: 294 DTIDDDRLRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNPESEATCAVTELNGRVVGS 352
Query: 323 RAIRVNVAEDRQRRSS 338
+ + V +A+ ++ R +
Sbjct: 353 KPLYVALAQRKEERKA 368
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 9/169 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+LP DV+ L F AG V V + T RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ +D+ V R +R P + G +++ NL +DN + FS G
Sbjct: 62 TMN-FDL------VRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+++ +V D E G S+G+GFV +E N +I ++G L+G+ + V
Sbjct: 115 NILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 98/178 (55%), Gaps = 9/178 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ + F G + +V + E S+G+GFV T E A +++
Sbjct: 92 VFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKV 150
Query: 222 HRYDIDGRLLTVNKAAPRGTQP--ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
+ ++G+ + V K PR Q E+A ++F +YV N + D+ +L++ F +GK
Sbjct: 151 NGMLLNGKKVYVGKFIPRKEQELGEKA-KLFT---NVYVKNFTEDFDDEKLKEFFEPYGK 206
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL-DGRAIRVNVAEDRQRR 336
+ + +V+ +E G+S+GFGFV + A+ AL+G+++ +G+++ V A+ + R
Sbjct: 207 ITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAER 263
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 25/198 (12%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P A LFVGNL ++VD L FE G + ++ R+T RSRGFG+V + +A
Sbjct: 281 PGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAA 340
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR-------------------- 255
KA E +IDGR++ ++ A R ++ + GF+
Sbjct: 341 KAFEAKKGAEIDGRVINLDYATGRPANKDQ-----QGGFKDRANARARSFGDQASPESDT 395
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VGNLP++ + + ++F E G ++ R+ D ++GR +GFG+V SS E A L
Sbjct: 396 LFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNEL 455
Query: 316 DGQNLDGRAIRVNVAEDR 333
G +L GR +R++ + R
Sbjct: 456 QGADLLGRPVRLDFSTPR 473
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 25/198 (12%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P A LFVGNL ++VD L FE G + ++ R+T RSRGFG+V + +A
Sbjct: 284 PGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAA 343
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR-------------------- 255
KA E +IDGR++ ++ A R ++ + GF+
Sbjct: 344 KAFEAKKGAEIDGRVINLDYATGRPANKDQ-----QGGFKDRANARARSFGDQASPESDT 398
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VGNLP++ + + ++F E G ++ R+ D ++GR +GFG+V SS E A L
Sbjct: 399 LFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNEL 458
Query: 316 DGQNLDGRAIRVNVAEDR 333
G +L GR +R++ + R
Sbjct: 459 QGADLLGRPVRLDFSTPR 476
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 248 RVFEPG----FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 303
+ +P ++VGNL W VD A L+ F G++ R++ +R+TGRSRGFG+V +
Sbjct: 278 KTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYT 337
Query: 304 SETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+ + A A G +DGR I ++ A R
Sbjct: 338 NAVDAAKAFEAKKGAEIDGRVINLDYATGR 367
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 25/198 (12%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P A LFVGNL ++VD L FE G + ++ R+T RSRGFG+V + +A
Sbjct: 291 PGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAA 350
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR-------------------- 255
KA E +IDGR++ ++ A R ++ + GF+
Sbjct: 351 KAFEAKKGAEIDGRVINLDYATGRPANKDQ-----QGGFKDRANARARSFGDQASPESDT 405
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VGNLP++ + + ++F E G ++ R+ D ++GR +GFG+V SS E A L
Sbjct: 406 LFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNEL 465
Query: 316 DGQNLDGRAIRVNVAEDR 333
G +L GR +R++ + R
Sbjct: 466 QGADLLGRPVRLDFSTPR 483
>gi|168054272|ref|XP_001779556.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669037|gb|EDQ55632.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 84
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 61/79 (77%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VGNL W D LE +FS++G+VV AR+ YD+++GRSRGFGFVT+S+ETE+N AI
Sbjct: 2 KLFVGNLSWGCDETALESLFSDYGRVVEARIAYDKDSGRSRGFGFVTLSNETEVNTAIEN 61
Query: 315 LDGQNLDGRAIRVNVAEDR 333
LDG D R +RVN+A D+
Sbjct: 62 LDGAEFDARQLRVNLAGDK 80
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLFVGNL + D L LF G V A + Y++++ RSRGFGFVT+S E A+E
Sbjct: 2 KLFVGNLSWGCDETALESLFSDYGRVVEARIAYDKDSGRSRGFGFVTLSNETEVNTAIEN 61
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPR 248
+ D R L VN A G +P APR
Sbjct: 62 LDGAEFDARQLRVNLA---GDKP--APR 84
>gi|159464421|ref|XP_001690440.1| hypothetical protein CHLREDRAFT_99772 [Chlamydomonas reinhardtii]
gi|158279940|gb|EDP05699.1| predicted protein [Chlamydomonas reinhardtii]
Length = 174
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ AK+FVG L ++ EKL E G+V A V YNR R RGFGFV + E A+K
Sbjct: 5 QSAKVFVGGLSWETTGEKLRAYMENFGSVREAFVSYNRNNGRPRGFGFVVFESPEVADKV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--GFRIYVGNLPWEVDNARLEQVFS 275
V H ID R + +A P+ PE + P +I+VG L VD A+L Q FS
Sbjct: 65 VATKHM--IDRREVEAKRAVPKEDAPEEKQQGSAPQRTKKIFVGGLAPTVDEAQLRQHFS 122
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+ G V +A V+YD E R RGFGFVT + E + + Q + + I V
Sbjct: 123 DFGTVEDAVVMYDHENKRPRGFGFVTFAEEEAVERVFSHGAVQTIADKPIEV 174
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
E+++ P K+FVG L VD +L F GTVE A V+Y+ E R RGFGFVT
Sbjct: 90 EKQQGSAPQRTKKIFVGGLAPTVDEAQLRQHFSDFGTVEDAVVMYDHENKRPRGFGFVTF 149
Query: 209 STVEEAEK 216
+ E E+
Sbjct: 150 AEEEAVER 157
>gi|350296577|gb|EGZ77554.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 356
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 103/182 (56%), Gaps = 10/182 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VGNL + +D L FE + A V+ +RE+ RSRGFG+V +T E+A+KA +
Sbjct: 110 LWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQKAYDAK 169
Query: 222 HRYDIDGRLLTVNKAAP-RGTQPE--RAPRVFEPGFRI-------YVGNLPWEVDNARLE 271
++GR + ++ AA G +P+ A R + G I +VGN+P+ D + +
Sbjct: 170 SGALLEGREMRLDFAAKDAGNKPQDKAANRAAKHGDTISPESDTLFVGNMPFSADESVVS 229
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F+ V + R+ D+E+GR +GF +VT +S + +A L+G +L+GR +R++ A+
Sbjct: 230 DFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQLNGSDLNGRPVRLDYAK 289
Query: 332 DR 333
R
Sbjct: 290 PR 291
>gi|336464486|gb|EGO52726.1| hypothetical protein NEUTE1DRAFT_91358 [Neurospora tetrasperma FGSC
2508]
Length = 356
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 103/182 (56%), Gaps = 10/182 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VGNL + +D L FE + A V+ +RE+ RSRGFG+V +T E+A+KA +
Sbjct: 110 LWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQKAYDAK 169
Query: 222 HRYDIDGRLLTVNKAAP-RGTQPE--RAPRVFEPGFRI-------YVGNLPWEVDNARLE 271
++GR + ++ AA G +P+ A R + G I +VGN+P+ D + +
Sbjct: 170 SGALLEGREMRLDFAAKDAGNKPQDKAANRAAKHGDTISPESDTLFVGNMPFSADESVVS 229
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F+ V + R+ D+E+GR +GF +VT +S + +A L+G +L+GR +R++ A+
Sbjct: 230 DFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQLNGSDLNGRPVRLDYAK 289
Query: 332 DR 333
R
Sbjct: 290 PR 291
>gi|85111281|ref|XP_963862.1| hypothetical protein NCU03092 [Neurospora crassa OR74A]
gi|28925605|gb|EAA34626.1| predicted protein [Neurospora crassa OR74A]
Length = 428
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 103/182 (56%), Gaps = 10/182 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VGNL + +D L FE + A V+ +RE+ RSRGFG+V +T E+A+KA +
Sbjct: 182 LWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVDFATNEQAQKAYDAK 241
Query: 222 HRYDIDGRLLTVNKAAP-RGTQPE--RAPRVFEPGFRI-------YVGNLPWEVDNARLE 271
++GR + ++ AA G +P+ A R + G I +VGN+P+ D + +
Sbjct: 242 SGALLEGREMRLDFAAKDAGNKPQDKAANRAAKHGDTISPESDTLFVGNMPFSADESVVS 301
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F+ V + R+ D+E+GR +GF +VT +S + +A L+G +L+GR +R++ A+
Sbjct: 302 DFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQLNGSDLNGRPVRLDYAK 361
Query: 332 DR 333
R
Sbjct: 362 PR 363
>gi|302406056|ref|XP_003000864.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
gi|261360122|gb|EEY22550.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
Length = 769
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 8/177 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFV +LP D SE LA F + V+ A V+ ++ T SRGFGFVT++ E+A +A
Sbjct: 40 LFVRSLPPDATSESLADYFSQHFPVKHATVVVDQATKESRGFGFVTLTDAEDALEAKAKL 99
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF---RIYVGNLPWEVDN-ARLEQVFSEH 277
+ +GR +TV+ A R ++ E + ++ + NLPW V A+L+ +F +
Sbjct: 100 NNELWEGRRITVDLAEARNR--DQNSSAIEEAWVSPKLIIRNLPWSVKTPAQLQALFQSY 157
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
GK+ A + + GR RGFGFVT+ E +AI A++G+ +DGR I V+ A +++
Sbjct: 158 GKIKFADLPMN--NGRLRGFGFVTIRGEKNAENAIKAMNGKGIDGRTIAVDWAVEKE 212
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%)
Query: 232 TVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 291
T N A QP+ E ++V +LP + + L FS+H V +A VV D+ T
Sbjct: 16 TANHHADGAPQPKSKKAKVEANRSLFVRSLPPDATSESLADYFSQHFPVKHATVVVDQAT 75
Query: 292 GRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
SRGFGFVT++ + +A A L+ + +GR I V++AE R R
Sbjct: 76 KESRGFGFVTLTDAEDALEAKAKLNNELWEGRRITVDLAEARNR 119
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 23/101 (22%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D+ +F+ NLP+ E+L F + G V A V+ +R TDR G GFV +++ V
Sbjct: 338 DSTVFIRNLPFTTTDEQLKSHFARFGPVRYARVVMDRATDRPAGTGFVCFFDEADSKACV 397
Query: 219 EMFHR-----------------------YDIDGRLLTVNKA 236
+ R Y +DGRLL+V +A
Sbjct: 398 KNAPRSQAAPLVGKHSILQDETADPEGKYTLDGRLLSVAQA 438
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 242 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 301
QPE A + +++ NLP+ + +L+ F+ G V ARVV DR T R G GFV
Sbjct: 327 QPEAAKKTTNNDSTVFIRNLPFTTTDEQLKSHFARFGPVRYARVVMDRATDRPAGTGFVC 386
Query: 302 MSSETELNDAI 312
E + +
Sbjct: 387 FFDEADSKACV 397
>gi|195584475|ref|XP_002082032.1| GD11341 [Drosophila simulans]
gi|194194041|gb|EDX07617.1| GD11341 [Drosophila simulans]
Length = 379
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 17/199 (8%)
Query: 155 EPPEDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
E E AKLF V N D D EKL FE G + +V+ ++E +S+GFGFV T
Sbjct: 174 ELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFET 232
Query: 211 VEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVG 259
E AE AV+ + D+ +G+ L V +A + + + R FE G +YV
Sbjct: 233 TEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVK 292
Query: 260 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 319
NL +D+ RL FS +G + +A+V+ D E GRS+GFGFV ++ +E A+ L+G+
Sbjct: 293 NLDDTIDDDRLRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRV 351
Query: 320 LDGRAIRVNVAEDRQRRSS 338
+ + + V +A+ ++ R +
Sbjct: 352 VGSKPLYVALAQRKEERKA 370
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 9/169 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+LP DV+ L F AG V V + T RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ +D+ V R +R P + G +++ NL +DN + FS G
Sbjct: 62 TMN-FDL------VRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+++ +V D E G S+G+GFV +E N +I ++G L+G+ + V
Sbjct: 115 NILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
>gi|449019177|dbj|BAM82579.1| probable heterogeneous nuclear RNP protein A [Cyanidioschyzon
merolae strain 10D]
Length = 273
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 94/193 (48%), Gaps = 17/193 (8%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+FVG L +D + L FE+ G V A V+ NRET + RGFGFVT E +AV
Sbjct: 9 KVFVGGLSWDTNEASLVAYFERFGKVIDAVVMRNRETGQPRGFGFVTFEE-EGVAQAVAS 67
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFE-------------PGFRIYVGNLPWEVDN 267
R+++DGRL+ A P+ + + V + P R+YV LP
Sbjct: 68 LERHELDGRLVETKVAVPKSAEDPESNTVVDTAQRYGPSGLGEKPSRRVYVSGLPQACTE 127
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN--LDGRAI 325
L FS G + RVV D TG S+G+GFV +ET + + +LD +N + G A
Sbjct: 128 DDLRAFFSRFGSLEAVRVVVDHHTGLSKGYGFVVF-AETAASQKVQSLDPENFVIRGSAF 186
Query: 326 RVNVAEDRQRRSS 338
RV V R SS
Sbjct: 187 RVKVRCCRNNESS 199
>gi|194880963|ref|XP_001974622.1| GG21846 [Drosophila erecta]
gi|190657809|gb|EDV55022.1| GG21846 [Drosophila erecta]
Length = 635
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 17/196 (8%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E AKLF V N D D EKL FE G + +V+ ++E +S+GFGFV T E
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEA 235
Query: 214 AEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLP 262
AE AV+ + D+ +G+ L V +A + + + R FE G +YV NL
Sbjct: 236 AEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLD 295
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+D+ RL FS +G + +A+V+ D E GRS+GFGFV ++ +E A+ L+G+ +
Sbjct: 296 DTIDDDRLRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGS 354
Query: 323 RAIRVNVAEDRQRRSS 338
+ + V +A+ ++ R +
Sbjct: 355 KPLYVALAQRKEERKA 370
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+LP DV+ L F AG V V + T RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLPQDVNESGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ +D L NK R +R P + G +++ NL +DN + FS G
Sbjct: 62 TMN-FD-----LLRNKPI-RIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +V D E G S+G+GFV +E N +I ++G L+G+ + V R+ R
Sbjct: 115 NILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKER 171
>gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806518|dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E + FEK G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 66 GKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 125
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H IDGR + V + PR + P+ +I+VG LP + L + FS +G
Sbjct: 126 DEHV--IDGRTVEVKRTVPREEMSSKDGPKTR----KIFVGGLPSSLTEDELREHFSPYG 179
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
K+V +++ D TGRSRGFGFVT SE + I+ ++L G+ + + AE ++
Sbjct: 180 KIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKH 236
>gi|356572088|ref|XP_003554202.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Glycine max]
Length = 336
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 4/181 (2%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P KLFV L ++ SE L F++ G +E VI+++ T +SRG+GF+T +E ++
Sbjct: 63 PAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIFDKVTGKSRGYGFITFKNMESTQQ 122
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
A+ + IDGRL N A + AP + ++Y+G+L EV + L F+
Sbjct: 123 ALRAPSKL-IDGRLAVCNLACESLSGTSSAPDLSL--RKLYIGSLSPEVTSEILLNYFAR 179
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
HG++ V YDR+T SRGFGFVT + AI ++ + L GR I V A+ + +
Sbjct: 180 HGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKKAIDDVE-KMLGGRNIVVKYADSHKGK 238
Query: 337 S 337
+
Sbjct: 239 T 239
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL++G+L +V SE L F + G +E V Y+R+T+ SRGFGFVT T E A+KA++
Sbjct: 158 KLYIGSLSPEVTSEILLNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKKAIDD 217
Query: 221 FHRYDIDGRLLTVNKA-----------APRGTQPERAPRVFEPGF 254
+ + GR + V A P G P AP PG+
Sbjct: 218 VEKM-LGGRNIVVKYADSHKGKTGQPPFPSGVVP-MAPLPMNPGY 260
>gi|448520030|ref|XP_003868205.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis Co 90-125]
gi|380352544|emb|CCG22770.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis]
Length = 498
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 10/192 (5%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
E F E A +F G L +++D + L FE V A VI R T +SRG+G+V S+
Sbjct: 246 ESFTTDEEPATIFAGRLSWNIDDDWLKREFEHLEGVISARVIMERATGKSRGYGYVDFSS 305
Query: 211 VEEAEKAVEMFHRYDIDGRL--LTVNKAAPRGTQP--ERAPRVF-----EPGFRIYVGNL 261
AE A+ +IDGR L ++ P T+ +RA R F P +++GNL
Sbjct: 306 KSAAENAIAEMQGKEIDGRPINLDLSTGKPHATKSNNDRA-RQFGDQQSPPSDTLFIGNL 364
Query: 262 PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLD 321
+ + +L +VF E+G V++ R+ +T + +GFG+V SS E A+ AL+G+ L+
Sbjct: 365 SFNANRDKLFEVFGEYGNVISCRLPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYLE 424
Query: 322 GRAIRVNVAEDR 333
GR R++ + R
Sbjct: 425 GRPCRLDFSAPR 436
>gi|195487595|ref|XP_002091975.1| GE11925 [Drosophila yakuba]
gi|194178076|gb|EDW91687.1| GE11925 [Drosophila yakuba]
Length = 634
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 17/196 (8%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E AKLF V N D D EKL FE G + +V+ ++E +S+GFGFV T E
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEA 235
Query: 214 AEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLP 262
AE AV+ + D+ +G+ L V +A + + + R FE G +YV NL
Sbjct: 236 AEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLD 295
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+D+ RL FS +G + +A+V+ D E GRS+GFGFV ++ +E A+ L+G+ +
Sbjct: 296 DTIDDDRLRVAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAPSEATCAVTELNGRVVGS 354
Query: 323 RAIRVNVAEDRQRRSS 338
+ + V +A+ ++ R +
Sbjct: 355 KPLYVALAQRKEERKA 370
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+LP DV+ L F AG V V + T RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ +D+ V R +R P + G +++ NL +DN + FS G
Sbjct: 62 TMN-FDL------VRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +V D E G S+G+GFV +E N +I ++G L+G+ + V R+ R
Sbjct: 115 NILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKER 171
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 101/180 (56%), Gaps = 5/180 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+++VG L ++VD++ L E G V A V +R + +SRGFG+V +T A+KA +
Sbjct: 214 QIWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTSGKSRGFGYVDFATAAAAKKAFDE 273
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFE-----PGFRIYVGNLPWEVDNARLEQVFS 275
++DGR + ++ + P+G E + F P +++GNL ++V + FS
Sbjct: 274 GQGKEVDGRAIRIDLSTPKGDVTENRAKKFNDQRSAPSSTLFIGNLSFDVSEDDVWNAFS 333
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
EHG+V R+ D ++GR +GFG+V +++ AI A+ GQ L GR +R++ + R R
Sbjct: 334 EHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAIDAMTGQELAGRPLRLDFSTPRDR 393
>gi|17136378|ref|NP_476667.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|24654793|ref|NP_725749.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|24654797|ref|NP_725750.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|195335482|ref|XP_002034394.1| GM21847 [Drosophila sechellia]
gi|76803808|sp|P21187.3|PABP_DROME RecName: Full=Polyadenylate-binding protein; Short=PABP;
Short=Poly(A)-binding protein
gi|7302665|gb|AAF57745.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|7302666|gb|AAF57746.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|21428474|gb|AAM49897.1| LD24412p [Drosophila melanogaster]
gi|21626472|gb|AAM68175.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|194126364|gb|EDW48407.1| GM21847 [Drosophila sechellia]
gi|220946756|gb|ACL85921.1| pAbp-PA [synthetic construct]
Length = 634
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 17/196 (8%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E AKLF V N D D EKL FE G + +V+ ++E +S+GFGFV T E
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEA 235
Query: 214 AEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLP 262
AE AV+ + D+ +G+ L V +A + + + R FE G +YV NL
Sbjct: 236 AEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLD 295
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+D+ RL FS +G + +A+V+ D E GRS+GFGFV ++ +E A+ L+G+ +
Sbjct: 296 DTIDDDRLRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGS 354
Query: 323 RAIRVNVAEDRQRRSS 338
+ + V +A+ ++ R +
Sbjct: 355 KPLYVALAQRKEERKA 370
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+LP DV+ L F AG V V + T RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ +D+ V R +R P + G +++ NL +DN + FS G
Sbjct: 62 TMN-FDL------VRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +V D E G S+G+GFV +E N +I ++G L+G+ + V R+ R
Sbjct: 115 NILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKER 171
>gi|115445085|ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group]
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806519|dbj|BAD17632.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|113535853|dbj|BAF08236.1| Os02g0221500 [Oryza sativa Japonica Group]
Length = 397
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E + FEK G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 66 GKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 125
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H IDGR + V + PR + P+ +I+VG LP + L + FS +G
Sbjct: 126 DEHV--IDGRTVEVKRTVPREEMSSKDGPKTR----KIFVGGLPSSLTEDELREHFSPYG 179
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
K+V +++ D TGRSRGFGFVT SE + I+ ++L G+ + + AE ++
Sbjct: 180 KIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKH 236
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 107/195 (54%), Gaps = 14/195 (7%)
Query: 154 VEPPE--DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTV 211
V+ PE A LFVGNL ++VD E L FE+ G + ++ +RE+ RSRGFG+V V
Sbjct: 230 VDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRESGRSRGFGYVEFVNV 289
Query: 212 EEAEKAVEMFHRYDIDGRLLTVN--------KAAPRGTQPERAP----RVFEPGFRIYVG 259
E+A KA ++DGR + ++ A PR RA + +++G
Sbjct: 290 EDAVKAHGAKKDAELDGRKMNLDYANARANGNANPRERADNRAKSFGDQTSPESDTLFIG 349
Query: 260 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 319
N+ + D ++++FS++G + R+ D ++GR +GFG+V SS E A+ A +G +
Sbjct: 350 NISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAENGAD 409
Query: 320 LDGRAIRVNVAEDRQ 334
L GR+IR++ + +Q
Sbjct: 410 LGGRSIRLDFSTPKQ 424
>gi|168033888|ref|XP_001769446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679366|gb|EDQ65815.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 108
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 63/79 (79%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VGNL W D LE +FS++G+V+ AR+ +R++GRSRGFGFVT+SSETE+N AI +
Sbjct: 25 KLFVGNLSWRCDEEALETLFSDYGRVLEARIATERDSGRSRGFGFVTLSSETEVNAAIES 84
Query: 315 LDGQNLDGRAIRVNVAEDR 333
LDG + DGR +RVN+A D+
Sbjct: 85 LDGADYDGRELRVNLAGDK 103
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 44/77 (57%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLFVGNL + D E L LF G V A + R++ RSRGFGFVT+S+ E A+E
Sbjct: 25 KLFVGNLSWRCDEEALETLFSDYGRVLEARIATERDSGRSRGFGFVTLSSETEVNAAIES 84
Query: 221 FHRYDIDGRLLTVNKAA 237
D DGR L VN A
Sbjct: 85 LDGADYDGRELRVNLAG 101
>gi|255730137|ref|XP_002549993.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131950|gb|EER31508.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 442
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 7/183 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A LFVG L +++D + L FE G V A VI R T +SRG+G+V AEKA
Sbjct: 213 EPATLFVGRLSWNIDDDWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFEGKSFAEKA 272
Query: 218 VEMFHRYDIDGRLLTVNKAA--PRGTQPERAPRVF-----EPGFRIYVGNLPWEVDNARL 270
+ +IDGR + ++ + P ++ + F P +++GNL + + L
Sbjct: 273 LAEMQGKEIDGRPINLDMSTGKPHASKSNDRAKQFGDSQSPPSDTLFIGNLSFNANRDGL 332
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
F E+G V++ R+ +T + +GFG+V SS E A+ AL+GQ ++GR R++ +
Sbjct: 333 FNTFGEYGNVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGQYIEGRPCRLDFS 392
Query: 331 EDR 333
R
Sbjct: 393 APR 395
>gi|385305976|gb|EIF49917.1| poly(a+) rna-binding protein [Dekkera bruxellensis AWRI1499]
Length = 439
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 90/182 (49%), Gaps = 19/182 (10%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVGNLPY + L F G V A+++ T S+G G V ++ E A+KA+ MF
Sbjct: 66 VFVGNLPYRTSWQDLKDCFRDVGEVLHADIMSFHGT--SKGMGTVEFASRELAQKAIRMF 123
Query: 222 HRYDIDGRLLTVNKAAPRGTQP----------------ERAPRVFEPGFRIYVGNLPWEV 265
R D GR + V + P T+ ER P GF +YVGNLP+
Sbjct: 124 DRTDFMGREIFVREDQPPPTERGEGRARGRGGRGFDRFERRPLPAVDGFEVYVGNLPFTT 183
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
+N + +F G V +A V R GRSRGFG + +E + I A DGQ +DGR I
Sbjct: 184 NNEEFQDIFKNXGDVKSAEVRMGR-NGRSRGFGIIIYGNEEDAKKTIEAFDGQVVDGRTI 242
Query: 326 RV 327
+V
Sbjct: 243 QV 244
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 21/193 (10%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+++VGNLP+ ++E+ +F+ G V+ AEV R RSRGFG + E+A+K +E
Sbjct: 173 EVYVGNLPFTTNNEEFQDIFKNXGDVKSAEVRMGR-NGRSRGFGIIIYGNEEDAKKTIEA 231
Query: 221 FHRYDIDGRLLTV-----NKAAP-------RGTQPERAPRVFE-------PGFRIYVGNL 261
F +DGR + V +++AP R +P + PG ++V NL
Sbjct: 232 FDGQVVDGRTIQVRSGRSSRSAPGADAGVRRDAEPSKNTDXVRGVSGDGAPGATLFVSNL 291
Query: 262 PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLD 321
PWE + L +F VV A + YD + R G V + E +A+A LDG
Sbjct: 292 PWETTQSDLYDLFGSIATVVKAEIQYD-DRNRXSGNAVVELGDEEXXANALAQLDGYEYG 350
Query: 322 GRAIRVNVAEDRQ 334
R + ++ A+ Q
Sbjct: 351 NRDLHISYAKRLQ 363
>gi|348511912|ref|XP_003443487.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Oreochromis niloticus]
Length = 301
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLFVG L D D + L FE+ GT+ V+ N++ RSR FGFVT ST EEA+ A+
Sbjct: 6 CKLFVGGLNVDTDDDGLRKHFEQYGTLTDCVVVVNKQLQRSRCFGFVTYSTPEEADAAMA 65
Query: 220 MFHRYDIDGRLLTVNKAAPR--GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+ +DG + V +A R +PE +V +I+VG L +++ L + FS++
Sbjct: 66 A-RPHTVDGNAVEVKRAVAREDANKPEALAKV----KKIFVGGLKDDIEEQHLTEYFSQY 120
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G+V + V+ ++ETG+ RGFGFV + + A+ + + G + V A +Q
Sbjct: 121 GQVEKSEVISEKETGKKRGFGFVYFTDHDAADKAV-VVKFHTVKGHKVEVKKALTKQ 176
>gi|255085602|ref|XP_002505232.1| predicted protein [Micromonas sp. RCC299]
gi|226520501|gb|ACO66490.1| predicted protein [Micromonas sp. RCC299]
Length = 211
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 99/175 (56%), Gaps = 5/175 (2%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRS-RGFGFVTMSTVEEAEKAV 218
AKL+VG+LP +++E++ +F+ G V +VI +RE S +GF FV ST EEA A
Sbjct: 33 AKLYVGHLPSTMNAERMLEMFKPFGRVLQIDVIPDRERQLSCKGFAFVLFSTPEEA-IAA 91
Query: 219 EMFHRYDIDGRLLTVN-KAAPRGT-QPERAPRV-FEPGFRIYVGNLPWEVDNARLEQVFS 275
+ + + ++G+ + V KA PR +P AP ++YV +P L+ +
Sbjct: 92 KALNGHVVEGKSIDVRLKAEPRAPREPVNAPVAPVNDDAKLYVAYMPDHYRAEELKMLLQ 151
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+G + RV+ DRETGRSRGFGF M E + AI L+GQ LDG+ + V +A
Sbjct: 152 PYGLPSDVRVITDRETGRSRGFGFAQMMDEQQAMAAIQGLNGQMLDGKTLVVRIA 206
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DAKL+V +P +E+L ML + G VI +RET RSRGFGF M ++A A
Sbjct: 128 DDAKLYVAYMPDHYRAEELKMLLQPYGLPSDVRVITDRETGRSRGFGFAQMMDEQQAMAA 187
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQP 243
++ + +DG+ L V A G +P
Sbjct: 188 IQGLNGQMLDGKTLVVRIA---GAKP 210
>gi|194753367|ref|XP_001958985.1| GF12652 [Drosophila ananassae]
gi|190620283|gb|EDV35807.1| GF12652 [Drosophila ananassae]
Length = 639
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 17/196 (8%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E AKLF V N D D EKL FE G + +V+ ++E +S+GFGFV T E
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEA 235
Query: 214 AEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLP 262
AE AV+ + D+ +G+ L V +A + + + R FE G +YV NL
Sbjct: 236 AEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHDSAFGVNLYVKNLD 295
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+D+ RL + FS +G + +A+V+ D E GRS+GFGFV S E A+ L+G+ +
Sbjct: 296 DSIDDERLCKEFSPYGTITSAKVMTDEE-GRSKGFGFVCFISANEATCAVTELNGRVVGS 354
Query: 323 RAIRVNVAEDRQRRSS 338
+ + V +A+ ++ R +
Sbjct: 355 KPLYVALAQRKEERKA 370
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L D++ L F AG V V + + RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLHQDINESNLFDKFSSAGPVLSIRVCRDVMSRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ +D L NK R +R P + G +++ NL +DN + FS G
Sbjct: 62 TMN-FD-----LLRNKPI-RIMWSQRDPSLRRSGVGNVFIKNLDKTIDNKAIYDTFSAFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +V D E S+G+GFV +E N +I ++G L+G+ + V R+ R
Sbjct: 115 NILSCKVATD-EKANSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKER 171
>gi|170060137|ref|XP_001865670.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
gi|167878677|gb|EDS42060.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
Length = 402
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 93/180 (51%), Gaps = 13/180 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L F + G V V+ N ET RSRGFGFVT + E E+A
Sbjct: 17 EKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERA 76
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGT-QPERA---PRVFEPGFRIYVGNLPWEVDNARLEQV 273
+E + +DGR + PR +P+R P+VF +G LP + L
Sbjct: 77 LEN-GPHTLDGRTIDPKPCNPRSLHKPKRTGGYPKVF-------LGGLPPNITETDLRSF 128
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FS +G V+ ++YD+E +SRGFGF++ +E + A A N+ G+ + + AE R
Sbjct: 129 FSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEAAVERATAEHF-VNISGKQVEIKKAEPR 187
>gi|148905890|gb|ABR16107.1| unknown [Picea sitchensis]
gi|224285605|gb|ACN40521.1| unknown [Picea sitchensis]
gi|224285970|gb|ACN40697.1| unknown [Picea sitchensis]
Length = 371
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 6/175 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+F+G L + S F K G + + ++ +R T RGFGFVT + +K ++
Sbjct: 51 GKIFIGGLSRETSSATFTKYFSKYGELTDSVIMKDRATGNPRGFGFVTYADPSVVDKVIK 110
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H IDG+++ + + PRG + P+ +I+VG +P + + FS+ GK
Sbjct: 111 DKHF--IDGKMVEIKRTIPRGNAATKGPKTK----KIFVGGIPTSITEDEFKDYFSKFGK 164
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
V+ +++ D TGRSRGFGFVT SE + + ++ L G+ + + AE ++
Sbjct: 165 VLEHQIMQDHGTGRSRGFGFVTFDSEEAVEEILSHGKMCELGGKQVEIKKAEPKK 219
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P+ K+FVG +P + ++ F K G V +++ + T RSRGFGFVT + E E+
Sbjct: 136 PKTKKIFVGGIPTSITEDEFKDYFSKFGKVLEHQIMQDHGTGRSRGFGFVTFDSEEAVEE 195
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV-------FEPGFRIY 257
+ ++ G+ + + KA P+ PE P F PG R Y
Sbjct: 196 ILSHGKMCELGGKQVEIKKAEPKKALPEPEPAYGMDGRPPFIPGARGY 243
>gi|242064522|ref|XP_002453550.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
gi|241933381|gb|EES06526.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
Length = 391
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E + FEK G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 56 GKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 115
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H IDGR + V + PR + P+ +I++G LP + L+ FS +G
Sbjct: 116 DDHV--IDGRTVEVKRTVPREEMTTKDGPKTR----KIFIGGLPPSLTEDELKDHFSSYG 169
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
KVV +++ D TGRSRGFGFVT SE + I+ ++L G+ + + AE ++ S
Sbjct: 170 KVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGS 228
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 106/195 (54%), Gaps = 14/195 (7%)
Query: 154 VEPPE--DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTV 211
V+ PE A LFVGNL ++VD E L FE+ G + ++ +RE+ RSRGFG+V V
Sbjct: 230 VDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRESGRSRGFGYVEFVNV 289
Query: 212 EEAEKAVEMFHRYDIDGRLLTVN--------KAAPRGTQPERAP----RVFEPGFRIYVG 259
E+A KA ++DGR + ++ A PR RA + +++G
Sbjct: 290 EDAVKAHGAKKDAELDGRKMNLDYANARANGNANPRERADNRAKSFGDQTSPESDTLFIG 349
Query: 260 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 319
N+ + D ++++FS++G + R+ D ++GR +GFG+V SS E A+ A G +
Sbjct: 350 NISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAEHGAD 409
Query: 320 LDGRAIRVNVAEDRQ 334
L GR+IR++ + +Q
Sbjct: 410 LGGRSIRLDFSTPKQ 424
>gi|350635107|gb|EHA23469.1| hypothetical protein ASPNIDRAFT_173997 [Aspergillus niger ATCC
1015]
Length = 235
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 25/194 (12%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LFVGNL ++VD L FE G + ++ R+T RSRGFG+V + +A KA E
Sbjct: 1 ANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFE 60
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR--------------------IYVG 259
+IDGR++ ++ A R ++ + GF+ ++VG
Sbjct: 61 AKKGAEIDGRVINLDYATGRPANKDQ-----QGGFKDRANARARSFGDQASPESDTLFVG 115
Query: 260 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 319
NLP++ + + ++F E G ++ R+ D ++GR +GFG+V SS E A L G +
Sbjct: 116 NLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNELQGAD 175
Query: 320 LDGRAIRVNVAEDR 333
L GR +R++ + R
Sbjct: 176 LLGRPVRLDFSTPR 189
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
PE LFVGNLP+D + + + LF + G++ + + ++ R +GFG+V S+V+EA
Sbjct: 107 PESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARA 166
Query: 217 AVEMFHRYDIDGRLLTVNKAAPR 239
A D+ GR + ++ + PR
Sbjct: 167 AFNELQGADLLGRPVRLDFSTPR 189
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
FR +VG L W DN LE+ FS++G+++ ++++ DRETGRSRGFGFVT SE + DAI
Sbjct: 8 FRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D+E L F + G + +++I +RET RSRGFGFVT + + A+E
Sbjct: 9 RCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQNLDGRNITVNEA 84
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
FR +VG L W DN LE+ FS++G+++ ++++ DRETGRSRGFGFVT SE + DAI
Sbjct: 8 FRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D+E L F + G + +++I +RET RSRGFGFVT + + A+E
Sbjct: 9 RCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQNLDGRNITVNEA 84
>gi|50543120|ref|XP_499726.1| YALI0A03509p [Yarrowia lipolytica]
gi|49645591|emb|CAG83649.1| YALI0A03509p [Yarrowia lipolytica CLIB122]
Length = 701
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 100/181 (55%), Gaps = 14/181 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFV ++P +V +E+LA F + V+ A V+ N T S+GFGFV+ +T E+A +A+
Sbjct: 16 LFVRSIPLEVTNEELADFFSQDFPVKHAVVVTNAATKESKGFGFVSFTTEEDAAEALLKC 75
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-----------RIYVGNLPWEVDNAR- 269
+ + G++L + A PR + R R FE R+ V NLPW V +
Sbjct: 76 RKQKLKGKILQIEFAKPR-ERKTREDRPFESSGDNNTSVEKRKPRLIVRNLPWSVREPQD 134
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L +VFS++GKVV+A + G+ GFGFVTMS + + A+A G +DGR + V+
Sbjct: 135 LIKVFSKYGKVVDA-FIPRGAGGKMSGFGFVTMSKKQHADKAVAESKGLEIDGRTVTVDF 193
Query: 330 A 330
A
Sbjct: 194 A 194
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++V ++P EV N L FS+ V +A VV + T S+GFGFV+ ++E + +A+
Sbjct: 16 LFVRSIPLEVTNEELADFFSQDFPVKHAVVVTNAATKESKGFGFVSFTTEEDAAEALLKC 75
Query: 316 DGQNLDGRAIRVNVAEDRQRRS 337
Q L G+ +++ A+ R+R++
Sbjct: 76 RKQKLKGKILQIEFAKPRERKT 97
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV N+PYD +E L FE G V A + ++ T + RG FV + ++ +K VE
Sbjct: 288 VFVRNIPYDATAESLKEHFENFGAVRYALPVIDKTTGQPRGTAFVAFESSDDCDKCVERA 347
Query: 222 ---------------HRYDIDGRLLTVNKAAPRGT 241
RY +GR+L V +A R T
Sbjct: 348 PAAATTSLLVADDTDPRYVFEGRILAVTQAVQRET 382
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 105/188 (55%), Gaps = 13/188 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL +VD ++L LF + G ++ +V+ + +SRGFGFV EEA+KAV+
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ ++ G+LL V +A R + R FE G +YV NL +++ RL+
Sbjct: 252 NGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERLK 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+VFS +G + +A+V+ E+ S+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 EVFSTYGVITSAKVM--TESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 332 DRQRRSSF 339
++ R +
Sbjct: 370 RKEERKAI 377
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+ L+VG+L DV L +F G + V + T RS G+ ++ +AE+A++
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I G+ + + + R P + + G I++ NL +DN L FS G
Sbjct: 71 TMNFEVIKGQPIRIMWS-------HRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++++VVY+ E G SRGFGFV + AI ++G L+ R + V + RQ+R
Sbjct: 124 SILSSKVVYN-EHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKR 179
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 15/86 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ L+V NL ++ E+L +F G + A+V+ E+ S+GFGFV S+ EEA KA
Sbjct: 292 QGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVM--TESSHSKGFGFVCFSSPEEATKA 349
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQP 243
V +++GR++ GT+P
Sbjct: 350 VT-----EMNGRIV--------GTKP 362
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 105/188 (55%), Gaps = 13/188 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL +VD ++L LF + G ++ +V+ + +SRGFGFV EEA+KAV+
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ ++ G+LL V +A R + R FE G +YV NL +++ RL+
Sbjct: 252 NGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERLK 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+VFS +G + +A+V+ E+ S+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 EVFSTYGVITSAKVM--TESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 332 DRQRRSSF 339
++ R +
Sbjct: 370 RKEERKAI 377
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+ L+VG+L DV L +F G + V + T RS G+ ++ +AE+A++
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I G+ + + + R P + + G I++ NL +DN L FS G
Sbjct: 71 TMNFEVIKGQPIRIMWS-------HRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++++VVY+ E G SRGFGFV + AI ++G L+ R + V + RQ+R
Sbjct: 124 SILSSKVVYN-EHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKR 179
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 15/86 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ L+V NL ++ E+L +F G + A+V+ E+ S+GFGFV S+ EEA KA
Sbjct: 292 QGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVM--TESSHSKGFGFVCFSSPEEATKA 349
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQP 243
V +++GR++ GT+P
Sbjct: 350 VT-----EMNGRIV--------GTKP 362
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 101/185 (54%), Gaps = 12/185 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL V E+ LFEK G + A + ++E +SRGFGFV S E+A KAVE
Sbjct: 262 VYVKNLDPAVTQEEFEKLFEKYGKITSAAIATDQE-GKSRGFGFVNFSEHEQAAKAVEEL 320
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARLE 271
+ + G+ L + +A + + E R +E G +Y+ NLP + D+ RL+
Sbjct: 321 NDTEFHGQKLFLGRAQKKSEREEELRRAYEAAKNEKLSKYQGVNLYIKNLPEDFDDERLQ 380
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ F+ G +A+V+ TG SRGFGFV S+ E N A+A ++G+ ++ R + V +A+
Sbjct: 381 EEFAPFGTTTSAKVM-RTPTGASRGFGFVCYSAPEEANKAVAEMNGKMIENRPLYVALAQ 439
Query: 332 DRQRR 336
+ R
Sbjct: 440 RKDVR 444
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 13/182 (7%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
+ L+VG L +V+ L +F G V V + T RS G+ +V E++E+A+
Sbjct: 79 NTSLYVGELEPNVNEAILFEIFNMVGAVSSIRVCRDTVTRRSLGYAYVNFLNAEDSERAL 138
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEH 277
E + I GR + + +R P G I++ NL +DN L F+
Sbjct: 139 EQLNYTPIRGRPCRIMWS-------QRDPGQRRAGQGNIFIKNLDEAIDNKALHDTFAAF 191
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN---VAEDRQ 334
GK+++ +V + E G S G+GFV S AI ++G L+ + + V +DRQ
Sbjct: 192 GKILSCKVASN-EHG-SLGYGFVHYESNDAAEAAIKHVNGMLLNDKKVYVGHHISKKDRQ 249
Query: 335 RR 336
+
Sbjct: 250 AK 251
>gi|346971381|gb|EGY14833.1| nucleolar protein [Verticillium dahliae VdLs.17]
Length = 785
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 104/192 (54%), Gaps = 21/192 (10%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFV +LP D SE LA F + V+ A V+ ++ T SRGFGFVT++ E+A +A
Sbjct: 40 LFVRSLPPDATSESLADYFSQHFPVKHATVVVDQATKESRGFGFVTLTDAEDALEAKAKL 99
Query: 222 HRYDIDGRLLTV----------NKAAPRGTQ-----PERAPRVFEPGF---RIYVGNLPW 263
+ +GR +TV N +APR ++ + E + ++ + NLPW
Sbjct: 100 NNELWEGRRITVDLAEARNRDQNSSAPRTATLAPVGKQKKSQAIEEAWVSPKLIIRNLPW 159
Query: 264 EVDN-ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+ A+L+ +F +GK+ A + + GR RGFGFVT+ E +AI A++G+ +DG
Sbjct: 160 SIKTPAQLQALFQSYGKIKFADLPMN--NGRLRGFGFVTIRGEKNAENAIKAMNGKGIDG 217
Query: 323 RAIRVNVAEDRQ 334
R I V+ A +++
Sbjct: 218 RTIAVDWAVEKE 229
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%)
Query: 232 TVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 291
T N A QP+ E ++V +LP + + L FS+H V +A VV D+ T
Sbjct: 16 TANHHADGAPQPKPKKAKVEANRSLFVRSLPPDATSESLADYFSQHFPVKHATVVVDQAT 75
Query: 292 GRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
SRGFGFVT++ + +A A L+ + +GR I V++AE R R
Sbjct: 76 KESRGFGFVTLTDAEDALEAKAKLNNELWEGRRITVDLAEARNR 119
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 23/101 (22%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
D+ +F+ NLP+ E+L F G V A V+ +R TDR G GFV +++ V
Sbjct: 354 DSTVFIRNLPFTTTDEQLKSHFAVFGPVRYARVVMDRATDRPAGTGFVCFFDEADSKACV 413
Query: 219 EMFHR-----------------------YDIDGRLLTVNKA 236
+ R Y +DGRLL+V +A
Sbjct: 414 KNAPRSQAAPLVGKHSILQDETADPEGKYTLDGRLLSVAQA 454
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 242 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 301
QPE A + +++ NLP+ + +L+ F+ G V ARVV DR T R G GFV
Sbjct: 343 QPETAKKTTNNDSTVFIRNLPFTTTDEQLKSHFAVFGPVRYARVVMDRATDRPAGTGFVC 402
Query: 302 MSSETELNDAI 312
E + +
Sbjct: 403 FFDEADSKACV 413
>gi|222622445|gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japonica Group]
Length = 510
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 7/176 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E + FEK G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 179 GKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 238
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H IDGR + V + PR + P+ +I+VG LP + L + FS +G
Sbjct: 239 DEHV--IDGRTVEVKRTVPREEMSSKDGPKTR----KIFVGGLPSSLTEDELREHFSPYG 292
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
K+V +++ D TGRSRGFGFVT SE + I+ ++L G+ + + AE ++
Sbjct: 293 KIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 348
>gi|351725469|ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 59/78 (75%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE+ FS++G++V +++ DRETGRSRGFGFVT +SE + DAI
Sbjct: 8 YRCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIG 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
A++GQNLDGR I VN A+
Sbjct: 68 AMNGQNLDGRNITVNEAQ 85
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F + G + ++I +RET RSRGFGFVT ++ + + A+
Sbjct: 9 RCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIGA 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQNLDGRNITVNEA 84
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 59/78 (75%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE+ FS +G++V ++V+ DRETGRSRGFGFVT +SE + DAI
Sbjct: 8 YRCFVGGLAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQNLDGR+I VN A+
Sbjct: 68 GMNGQNLDGRSITVNEAQ 85
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + DS+ L F G + ++VI +RET RSRGFGFVT ++ + + A+E
Sbjct: 9 RCFVGGLAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQNLDGRSITVNEA 84
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 105/188 (55%), Gaps = 13/188 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL +VD ++L LF + G ++ +V+ + +SRGFGFV EEA+KAV+
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ ++ G+LL V +A R + R FE G +YV NL +++ RL+
Sbjct: 252 NGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERLK 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+VFS +G + +A+V+ E+ S+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 EVFSTYGVITSAKVM--TESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 332 DRQRRSSF 339
++ R +
Sbjct: 370 RKEERKAI 377
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+ L+VG+L DV L +F G + V + T RS G+ ++ +AE+A++
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I G+ + + R P + + G I++ NL +DN L FS G
Sbjct: 71 TMNFEVIKGQPIRI-------MWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++++VVY+ E G SRGFGFV + AI ++G L+ R + V + RQ+R
Sbjct: 124 SILSSKVVYN-EHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKR 179
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 21/145 (14%)
Query: 99 EENGEEEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPE 158
E++ E + ++ E G L G + + ERQ E ++E +
Sbjct: 239 EKHEEAQKAVDHMNGKEVSGQLLYVGRAQ------KRAERQSELKRRFEQMKQERQNRYQ 292
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
L+V NL ++ E+L +F G + A+V+ E+ S+GFGFV S+ EEA KAV
Sbjct: 293 GVNLYVKNLDDSINDERLKEVFSTYGVITSAKVM--TESSHSKGFGFVCFSSPEEATKAV 350
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQP 243
+++GR++ GT+P
Sbjct: 351 T-----EMNGRIV--------GTKP 362
>gi|384250217|gb|EIE23697.1| hypothetical protein COCSUDRAFT_8654, partial [Coccomyxa
subellipsoidea C-169]
Length = 175
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 93/179 (51%), Gaps = 9/179 (5%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
++ ++AK+FVG L ++ EKL FE GTV A V Y+R T R RGFGFV
Sbjct: 1 MQSKQEAKVFVGGLSWETSDEKLRAFFENFGTVLEAFVSYDRHTGRPRGFGFVVFEDPAV 60
Query: 214 AEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-----FRIYVGNLPWEVDNA 268
A+K V + H ID R + KA P+ P + RV + +I+VG L VD
Sbjct: 61 ADKVVSLQH--TIDRREVEAKKAVPKEEHP--SGRVLDSSNPQRTKKIFVGGLAPSVDEN 116
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L+ F G+V +A V+YD + R RGFGF+T S+E ++ + Q L + I +
Sbjct: 117 VLKGYFERFGEVEDAVVMYDHDNKRPRGFGFITFSTEEAVDGVFSGGTMQTLHDKPIEI 175
>gi|356544204|ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 364
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 99/177 (55%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL + E L LF +AG V V +R T++ +G+GFV + E+A+ A
Sbjct: 23 QDATAYVGNLDPQICEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G +++GNL +VD L FS
Sbjct: 83 IKVLNMIKLYGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G +V N +++ D ETG SRGFGF++ S + AI A++GQ L R I V+ A +
Sbjct: 136 GVIVTNPKIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKK 192
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 257 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
YVGNL ++ L ++F + G VVN V DR T + +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQICEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKVLN 87
Query: 317 GQNLDGRAIRVNVAEDRQR 335
L G+ IRVN A ++
Sbjct: 88 MIKLYGKPIRVNKASQDKK 106
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G + +++ + ET SRGFGF++ + E ++ A+
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDSAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|432876616|ref|XP_004073061.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLFVG L D D + L FE+ GT+ V+ N++ RSR FGFVT ST EEA+ A+
Sbjct: 6 CKLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQLQRSRCFGFVTYSTPEEADAAMA 65
Query: 220 MFHRYDIDGRLLTVNKAAPR--GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+ +DG + V +A R +PE +V +I+VG L +++ L FS++
Sbjct: 66 A-RPHTVDGNAVEVKRAVAREDANRPEALAKV----KKIFVGGLKDDIEEDHLTDYFSQY 120
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G+V + V+ ++ETG+ RGFGFV + + A+ + ++G + V A +Q
Sbjct: 121 GEVEKSEVISEKETGKKRGFGFVYFTDHDSADKAV-VVKFHTVNGHKVEVKKALTKQ 176
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ A LFVGNL + VD L F+ V A V+ ++++ RSRGFG+V T E AEKA
Sbjct: 286 KSATLFVGNLGWGVDDNALYEEFQNNEGVTGARVVTDKDSGRSRGFGYVDFETPEAAEKA 345
Query: 218 VEMFHRYDIDGRLLTVNKAA-------PRGTQPERAPR---VFEP-GFRIYVGNLPWEVD 266
+ + GR + ++ AA P ERA + V P ++VGNL + +
Sbjct: 346 YNDKNGAFLQGREMRLDFAAKPSADSTPNARAAERARKHGDVISPESDTLFVGNLSFSAN 405
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
+ F++ KV + R+ D+E+GR +GF +VT SS + A AL+G +LDGR +R
Sbjct: 406 EESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYVTFSSVDDAKAAFEALNGSDLDGRPVR 465
Query: 327 VNVAEDR 333
++ A+ R
Sbjct: 466 LDFAKPR 472
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
PE LFVGNL + + E ++ F K V+ + ++E+ R +GF +VT S+V++A+
Sbjct: 390 PESDTLFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYVTFSSVDDAKA 449
Query: 217 AVEMFHRYDIDGRLLTVNKAAPR 239
A E + D+DGR + ++ A PR
Sbjct: 450 AFEALNGSDLDGRPVRLDFAKPR 472
>gi|357140379|ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 7/177 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E + F K G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 65 GKIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 124
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H +IDGR + V + PR + P+ +I+VG LP + L FS +G
Sbjct: 125 DEH--NIDGRTVEVKRTVPREEMSSKDGPKTR----KIFVGGLPASLSEDDLRDHFSSYG 178
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
KVV +++ D TGRSRGFGFVT SE + I+ ++L G+ + + AE ++
Sbjct: 179 KVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKH 235
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+I+VG + WE + F ++G + ++ ++ D+ T RGFGFVT S + ++ +
Sbjct: 66 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE- 124
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSS 338
D N+DGR + V R+ SS
Sbjct: 125 -DEHNIDGRTVEVKRTVPREEMSS 147
>gi|255550690|ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
gi|223544492|gb|EEF46011.1| spliceosome associated protein, putative [Ricinus communis]
Length = 376
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 98/177 (55%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GFV + E+A+ A
Sbjct: 23 QDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G +++GNL +VD L FS
Sbjct: 83 IKIMNMIKLFGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPDVDEKLLHDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G +V N +++ D ETG SRGFGF++ S + AI A++GQ L R I V+ A +
Sbjct: 136 GVIVTNPKIMRDPETGNSRGFGFISYDSFDASDAAIEAMNGQYLCNRQITVSYAYKK 192
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 257 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI ++
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKIMN 87
Query: 317 GQNLDGRAIRVNVAEDRQR 335
L G+ IRVN A ++
Sbjct: 88 MIKLFGKPIRVNKASQDKK 106
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G + +++ + ET SRGFGF++ + + ++ A+
Sbjct: 112 ANLFIGNLDPDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFDASDAAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|357124085|ref|XP_003563737.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 1 [Brachypodium distachyon]
Length = 410
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 17/210 (8%)
Query: 128 GEDTVVEAGERQEESGEEGVFEEEEFVEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGT 185
G D VV + E GEEG ++ P D K+FVG + ++ E + F+K G
Sbjct: 57 GGDAVVNS----EAGGEEG----KDVAAEPADGSGKIFVGGVAWETTEETFSKHFQKYGA 108
Query: 186 VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 245
+ + ++ ++ T RGFGFVT S ++ +E H IDGR + V + PR +
Sbjct: 109 ITDSVIMKDKHTKMPRGFGFVTFSDPSVIDRVLEDEHT--IDGRTVEVKRTVPREEMSTK 166
Query: 246 -APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 304
P+ +I+VG +P + +L++ FS +GKV +++ D TGRSRGFGFVT S
Sbjct: 167 DGPKTR----KIFVGGIPTSLTEGKLKEHFSSYGKVEEHQIMVDHSTGRSRGFGFVTFES 222
Query: 305 ETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
E + ++ +L G+ + + AE ++
Sbjct: 223 EDAVERVMSEGRMHDLGGKQVEIKRAEPKK 252
>gi|222629794|gb|EEE61926.1| hypothetical protein OsJ_16667 [Oryza sativa Japonica Group]
Length = 1011
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
++ L+VGNLP V S KL LF G + + V+ + T S+G+GFV S A +A
Sbjct: 294 DNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEA 353
Query: 218 VEMFHRYDIDGRLLTVNKAA-PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + ++GR L V A P + P ++YV NL ++ RL +F
Sbjct: 354 IKRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLP 413
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
G+V NA+V D TG S+G+GFV SS +A+ L+G+ +DGR I V V+
Sbjct: 414 FGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVS 467
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 19/190 (10%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
AKL+V NL +++++L LF G V A+V + T S+G+GFV S+ A +AV
Sbjct: 391 AKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVI 450
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPE---------RAPRVFEPGF----------RIYVGN 260
+ +DGR + V + T P R V P +YV N
Sbjct: 451 HLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCN 510
Query: 261 LPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL 320
+P +D +L ++F GK+ +ARVV D +T ++G+GF+ + AIAA++G +
Sbjct: 511 MPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALV 570
Query: 321 DGRAIRVNVA 330
G I V VA
Sbjct: 571 GGEMIIVRVA 580
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG +P + ++ LF G V A + R + +G V A A++
Sbjct: 689 ANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF------RFQRYGMVRFDNPSCAAAAID 742
Query: 220 MFHRYDIDGRLLTVNKA-------APRGTQPERAPRVFEPG----FRIYVGNLPWEVDNA 268
Y I G +L V A A +G + E G +YV +LP V+N
Sbjct: 743 HLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSN-EQGQIDMTNLYVSHLPSYVNNE 801
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
RL +F G++ A+VV +R TG S+GFGFV + A+ ++G LDG + V
Sbjct: 802 RLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVR 861
Query: 329 VA 330
+A
Sbjct: 862 IA 863
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+ L+V N+P +D++KL LF G + A V+ + +T ++G+GF+ + E A KA+
Sbjct: 504 SNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIA 563
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP-----GFRIYVGNLPWEVDNARLEQVF 274
+ + G ++ V A G P + + R+Y+ NLP + ++ +F
Sbjct: 564 AMNGALVGGEMIIVRVA---GLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLF 620
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ G++ +V+ + E + V + A+ +DG ++G+ + V +E
Sbjct: 621 APFGQIT--KVLMNLE------YSLVWYADAPSATKAVQHMDGYMVEGKRLVVKRSE 669
>gi|225441409|ref|XP_002278602.1| PREDICTED: DAZ-associated protein 1-like [Vitis vinifera]
Length = 355
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 94/185 (50%), Gaps = 14/185 (7%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P KLFV L ++ SE L F G +E VI ++ T +SRG+GF+T +E +
Sbjct: 75 PVHRKLFVRGLAWNTTSETLCAAFRLHGEIEEGAVIVDKTTGKSRGYGFITYKHMESTQS 134
Query: 217 AVEMFHRYDIDGRLLTVNKAA----PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
A++ + IDGR+ N A T P++A R ++Y+G L +V + L
Sbjct: 135 ALQAPSKL-IDGRMAVCNLACEGLSGASTTPDQAQR------KLYIGGLAPDVTSEVLLS 187
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN-LDGRAIRVNVAE 331
F HG++ V YD+ET SRGFGFVT + AI D Q L GR+I V +A+
Sbjct: 188 FFGRHGEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAID--DPQKFLGGRSIIVKLAD 245
Query: 332 DRQRR 336
+ +
Sbjct: 246 SHKGK 250
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 13/188 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NLP VD L LF + G + +V+ + ++ SRGFGFV EEA+KAV
Sbjct: 193 IYVKNLPGHVDERGLQDLFSQFGKMLSVKVMRD-DSGHSRGFGFVNFEKHEEAQKAVMDM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ + GRLL V +A RG + R FE G +YV NL +D+ +L
Sbjct: 252 NGMQVSGRLLYVGRAQKRGERQNELKRRFEHTKQDRLNRCQGVNLYVKNLDDSIDDEKLR 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPLYVALAQ 369
Query: 332 DRQRRSSF 339
++ R +
Sbjct: 370 RKEERKAI 377
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + + +R P + + G +++ NL +DN L FS
Sbjct: 68 ALDTMNFEVIKGQPIRIMWS-------QRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D SRGFGFV + AI+ ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVVCDDHG--SRGFGFVHFETHEAAQQAISTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 136 GERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNR 195
GERQ E +++ + + L+V NL +D EKL F G + A+V+
Sbjct: 270 GERQNELKRRFEHTKQDRLNRCQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVM--T 327
Query: 196 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 231
E S+GFGFV S+ EEA KAV +++GR++
Sbjct: 328 EGGHSKGFGFVCFSSPEEATKAVT-----EMNGRII 358
>gi|297739851|emb|CBI30033.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 94/185 (50%), Gaps = 14/185 (7%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P KLFV L ++ SE L F G +E VI ++ T +SRG+GF+T +E +
Sbjct: 62 PVHRKLFVRGLAWNTTSETLCAAFRLHGEIEEGAVIVDKTTGKSRGYGFITYKHMESTQS 121
Query: 217 AVEMFHRYDIDGRLLTVNKAA----PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
A++ + IDGR+ N A T P++A R ++Y+G L +V + L
Sbjct: 122 ALQAPSKL-IDGRMAVCNLACEGLSGASTTPDQAQR------KLYIGGLAPDVTSEVLLS 174
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN-LDGRAIRVNVAE 331
F HG++ V YD+ET SRGFGFVT + AI D Q L GR+I V +A+
Sbjct: 175 FFGRHGEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAID--DPQKFLGGRSIIVKLAD 232
Query: 332 DRQRR 336
+ +
Sbjct: 233 SHKGK 237
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W DN LE+ FS++G VV ++++ DRETGRSRGFGFVT +SE + DAI
Sbjct: 8 YRCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASEDSMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D+ L F + G V +++I +RET RSRGFGFVT ++ + A+E
Sbjct: 9 RCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASEDSMRDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQNLDGRNITVNEA 84
>gi|218195846|gb|EEC78273.1| hypothetical protein OsI_17967 [Oryza sativa Indica Group]
Length = 1001
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
++ L+VGNLP V S KL LF G + + V+ + T S+G+GFV S A +A
Sbjct: 295 DNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEA 354
Query: 218 VEMFHRYDIDGRLLTVNKAA-PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + ++GR L V A P + P ++YV NL ++ RL +F
Sbjct: 355 IKRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLP 414
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
G+V NA+V D TG S+G+GFV SS +A+ L+G+ +DGR I V V+
Sbjct: 415 FGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVS 468
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 12/181 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
AKL+V NL +++++L LF G V A+V + T S+G+GFV S+ A +AV
Sbjct: 392 AKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVI 451
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF----------RIYVGNLPWEVDNAR 269
+ +DGR + V + T P A V P +YV N+P +D +
Sbjct: 452 HLNGRLVDGRKIEVRVSGIPSTLPNSA--VESPSTTRTVKEIDMSNLYVCNMPSSIDTKK 509
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L ++F GK+ +ARVV D +T ++G+GF+ + AIAA++G + G I V V
Sbjct: 510 LVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIVRV 569
Query: 330 A 330
A
Sbjct: 570 A 570
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG +P + ++ LF G V A + R + +G V A A++
Sbjct: 679 ANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF------RFQRYGMVRFDNPSCAAAAID 732
Query: 220 MFHRYDIDGRLLTVNKA-------APRGTQPERAPRVFEPG----FRIYVGNLPWEVDNA 268
Y I G +L V A A +G + E G +YV +LP V+N
Sbjct: 733 HLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSN-EQGQIDMTNLYVSHLPSYVNNE 791
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
RL +F G++ A+VV +R TG S+GFGFV + A+ ++G LDG + V
Sbjct: 792 RLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVR 851
Query: 329 VA 330
+A
Sbjct: 852 IA 853
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+ L+V N+P +D++KL LF G + A V+ + +T ++G+GF+ + E A KA+
Sbjct: 494 SNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIA 553
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP-----GFRIYVGNLPWEVDNARLEQVF 274
+ + G ++ V A G P + + R+Y+ NLP + ++ +F
Sbjct: 554 AMNGALVGGEMIIVRVA---GLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLF 610
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ G++ +V+ + E + V + A+ +DG ++G+ + V +E
Sbjct: 611 APFGQIT--KVLMNLE------YSLVWYADAPSAIKAVQHMDGYMVEGKRLVVKRSE 659
>gi|357465131|ref|XP_003602847.1| Multiple RNA-binding domain-containing protein [Medicago
truncatula]
gi|355491895|gb|AES73098.1| Multiple RNA-binding domain-containing protein [Medicago
truncatula]
Length = 290
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 12/173 (6%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEV-IYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+L N+P+ +E + LFEK G V E+ +YN+ +R+RG FV M + EEA +A+
Sbjct: 90 RLLAQNVPWSSTTEDVRSLFEKYGKVLHVELSMYNK--NRNRGLAFVEMGSPEEASEALN 147
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQP----ERAPRVFEPGFRIYVGNLPWEVDNARLEQVF- 274
Y+ DGR++ + A P+ + ER P + ++V N P+E + +++ F
Sbjct: 148 SLQSYEFDGRIINIQYAKPKKEKIPPPVERKPITYN----LFVANFPYEARSKDVKEFFD 203
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
S GKVV+A V++ R G+GFV+ S+ E ++A+A G+N GR +RV
Sbjct: 204 SGTGKVVSAEVIFHENPRRPSGYGFVSYKSKKEADEALAEFQGKNFMGRPLRV 256
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARV-VYDRETGRSRGFGFVTMSSETELNDAIA 313
R+ N+PW + +F ++GKV++ + +Y++ R+RG FV M S E ++A+
Sbjct: 90 RLLAQNVPWSSTTEDVRSLFEKYGKVLHVELSMYNK--NRNRGLAFVEMGSPEEASEALN 147
Query: 314 ALDGQNLDGRAIRVNVA 330
+L DGR I + A
Sbjct: 148 SLQSYEFDGRIINIQYA 164
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NL DVD + L LF + G + +V+ + + SRGFGFV T EEA+KA
Sbjct: 189 EFTNIYVKNLQADVDEQGLQELFSQFGKMLSVKVMRD-SSGHSRGFGFVNFETHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL V +A R + R FE G +YV NL +D+
Sbjct: 248 VVHMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRMNRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 EKLRKEFSPYGMITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L DV L F G + V + T RS G+ ++ +AE+A++
Sbjct: 11 ASLYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I G+ + + + +R P + + G I++ NL +DN L FS G
Sbjct: 71 TMNFEMIKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEASIDNKALYDTFSTFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +V D E G SRGFGFV + AI ++G L+ + V + R+ R
Sbjct: 124 NILSCKVACD-EHG-SRGFGFVHFETHEAAQHAINTMNGMLLNDHKVFVGHFKSRRER 179
>gi|348666125|gb|EGZ05953.1| hypothetical protein PHYSODRAFT_348578 [Phytophthora sojae]
Length = 356
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 17/187 (9%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
V+P +++VGNL ++V ++L +KAGTV A+V+ RS+G G V +T EE
Sbjct: 172 VKPKRGFRVYVGNLSWNVKWQELKDHMKKAGTVVHADVL-EEPNGRSKGCGLVEYATQEE 230
Query: 214 AEKAVEMFHRYDIDGRLL-----------TVNKAAPRGTQPERAPRVFEPGFRIYVGNLP 262
A KA+ + +++GRL+ +++K A R APR G ++YVGNLP
Sbjct: 231 AAKAIAELNNTELEGRLIFVREDREPEGGSISKFAKRAA----APRGSGEGRQLYVGNLP 286
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
WE + +L+ +F G V A + + GRSRGFG + ++ + AI L+G ++G
Sbjct: 287 WETNWQQLKDLFRTVGDVERADIA-EYPDGRSRGFGIIRYTNAADAWQAIERLNGLEIEG 345
Query: 323 RAIRVNV 329
R I V +
Sbjct: 346 RLIEVRL 352
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 96/175 (54%), Gaps = 8/175 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+++VGNL + + + L + AG VE+A V+ + RS+G G VT T E A+ A+
Sbjct: 89 CRVYVGNLSWSIKWQDLKDHMQAAGPVELATVLES--NGRSKGCGIVTYETEEAAQNAIA 146
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
+ ++ GR + V + R QP A + + GFR+YVGNL W V L+ + G
Sbjct: 147 TLNDTELGGRKIFVRE--DREAQPVSAVKP-KRGFRVYVGNLSWNVKWQELKDHMKKAGT 203
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
VV+A V+ + GRS+G G V +++ E AIA L+ L+GR I V EDR+
Sbjct: 204 VVHADVL-EEPNGRSKGCGLVEYATQEEAAKAIAELNNTELEGRLIFVR--EDRE 255
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G R+YVGNL W + L+ G V A V+ GRS+G G VT +E +AI
Sbjct: 88 GCRVYVGNLSWSIKWQDLKDHMQAAGPVELATVL--ESNGRSKGCGIVTYETEEAAQNAI 145
Query: 313 AALDGQNLDGRAIRVNVAEDRQ 334
A L+ L GR ++ V EDR+
Sbjct: 146 ATLNDTELGGR--KIFVREDRE 165
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 102/189 (53%), Gaps = 15/189 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LF+GNL ++VD + L FE G + ++ +R++ RSRGFG+V + +A KA +
Sbjct: 260 ANLFIGNLSWNVDEDWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADAAKAYK 319
Query: 220 MFHRYDIDGRLLTVNKAAPR--------GTQPERAPRVFEPGFR-------IYVGNLPWE 264
++DGR + ++ A R G Q R G + ++VGNLP+
Sbjct: 320 AKKDTELDGRKINLDYATGRPANNQQGGGFQDRAQARARSFGDQSSPESDTLFVGNLPFS 379
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
+ ++++F E G +V R+ D ++GR +GFG+V +S E +A +L+G LDGR
Sbjct: 380 ANEDSVQELFGEKGSIVGIRLPTDPDSGRPKGFGYVQFASVDEAREAFNSLNGAELDGRP 439
Query: 325 IRVNVAEDR 333
+R++ + R
Sbjct: 440 VRLDFSTPR 448
>gi|357140381|ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+FVG + ++ E + F K G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 46 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 105
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H +IDGR + V + PR + P+ +I+VG LP + L FS +GK
Sbjct: 106 EH--NIDGRTVEVKRTVPREEMSSKDGPKTR----KIFVGGLPASLSEDDLRDHFSSYGK 159
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
VV +++ D TGRSRGFGFVT SE + I+ ++L G+ + + AE ++
Sbjct: 160 VVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKH 215
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+I+VG + WE + F ++G + ++ ++ D+ T RGFGFVT S + ++ +
Sbjct: 46 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE- 104
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSS 338
D N+DGR + V R+ SS
Sbjct: 105 -DEHNIDGRTVEVKRTVPREEMSS 127
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D E+L LF K G +V+ + T +S+GFGFV+ EEA KAVE
Sbjct: 193 VYIKNFGDDMDDERLKELFGKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEEANKAVEEM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ DI+G++L V +A + + R FE G +Y+ NL +D+ +L
Sbjct: 252 NGKDINGKMLFVGRAQKKAERQAELKRRFEQLKQERLSRYQGVNLYIKNLDDTIDDEKLR 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KEFSPFGSITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 332 DRQRRSS 338
++ R +
Sbjct: 370 RKEERKA 376
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L D+ AML+EK AG V V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHPDITE---AMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + +R P + + G +++ NL +DN L FS
Sbjct: 68 ALDTMNFDVIKGKPIRI-------MWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G S+G+ FV ++ + AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-ENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L ++ A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D G+ IR+
Sbjct: 66 ERALDTMNFDVIKGKPIRI 84
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 98/177 (55%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GFV + E+A+ A
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G +++GNL EVD L FS
Sbjct: 83 IKILNMLKLYGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPEVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G +V N +++ D ETG SRGFGFV+ S + AI A++ Q+L R I V+ A +
Sbjct: 136 GVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 257 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 317 GQNLDGRAIRVNVAEDRQR 335
L G+ IRVN A ++
Sbjct: 88 MLKLYGKPIRVNKASQDKK 106
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL +VD + L F G + +++ + ET SRGFGFV+ + E +++A+
Sbjct: 112 ANLFIGNLDPEVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNNQHLCNRPITVSYAYKKDTKGER 198
>gi|388855334|emb|CCF50998.1| related to NSR1-nuclear localization sequence binding protein
[Ustilago hordei]
Length = 452
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E +++VG L ++VD++ L E G V A V +R T +SRGFG+V +T A+KA
Sbjct: 177 ETNQVWVGQLSWNVDNDWLKSEMEVFGQVTSARVQLDRTTGKSRGFGYVDFATAAAAKKA 236
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE-----PGFRIYVGNLPWEVDNARLEQ 272
E +DGR + ++ + P+G E + F P +++GNL +++ +
Sbjct: 237 FEEGQGKQVDGRAIRIDLSTPKGDVSEDRAKKFNDQRSAPSSTLFIGNLSFDITEDDVWN 296
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
FSEHG+V R+ D ++GR +GFG+V +++ AI A+ GQ L GR +R++ +
Sbjct: 297 AFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAAAAIDAMTGQELAGRPLRLDFSTP 356
Query: 333 RQR 335
R R
Sbjct: 357 RDR 359
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG L W VDN L+ G+V +ARV DR TG+SRGFG+V ++ A
Sbjct: 180 QVWVGQLSWNVDNDWLKSEMEVFGQVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFEE 239
Query: 315 LDGQNLDGRAIRV-------NVAEDRQRR 336
G+ +DGRAIR+ +V+EDR ++
Sbjct: 240 GQGKQVDGRAIRIDLSTPKGDVSEDRAKK 268
>gi|356532261|ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 365
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 99/177 (55%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL + E L LF +AG V V +R T++ +G+GFV + E+A+ A
Sbjct: 23 QDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G +++GNL +VD L FS
Sbjct: 83 IKVLNMIKLYGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G +V N +++ D +TG SRGFGF++ S + AI A++GQ L R I V+ A +
Sbjct: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKK 192
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 257 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
YVGNL ++ L ++F + G VVN V DR T + +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKVLN 87
Query: 317 GQNLDGRAIRVNVAEDRQR 335
L G+ IRVN A ++
Sbjct: 88 MIKLYGKPIRVNKASQDKK 106
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G + +++ + +T SRGFGF++ + E ++ A+
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 6/178 (3%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVG+L ++VD L FE+ G + V+ +RE+ RS+GFG+V +T E A+KA+E
Sbjct: 304 LFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSKGFGYVEYTTNEAAKKALEEM 363
Query: 222 HRYDIDGRLLTVNKAAPRGTQPER-APRVF----EP-GFRIYVGNLPWEVDNARLEQVFS 275
DIDGR + V+ +APR P + R++ P ++V NL +E D ++ F
Sbjct: 364 KGKDIDGRTINVDFSAPRPENPRQDRSRLYGDQKSPESETVFVANLSFEADEQIVQTEFE 423
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G +V R+ D E+G+ +GF ++ A+ ++G + GRAIR + + R
Sbjct: 424 GFGNIVGLRIPTDPESGQPKGFCYIQYDRVDSARKAVEEMNGALVAGRAIRTDFSTPR 481
>gi|149240785|ref|XP_001526223.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450346|gb|EDK44602.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 601
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VGNL E++ +F + + N + + F+ + E+AEKA+
Sbjct: 102 LYVGNLAKSASEEQINEIFSSVSNPIKSIKLLNDKNKLGFNYAFIEFNESEDAEKALNSL 161
Query: 222 HRYDIDGRLLTVN-----KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
+ D++G + VN A G+ PE EP + I+VG+L EV++ L++ F++
Sbjct: 162 NGKDVNGSDIKVNWAYQSAAIAGGSTPE------EPSYNIFVGDLSSEVNDEALKKAFTK 215
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G + A V++D +T RSRG+GFVT + + +A+ +++G+ L GRAIR N A +
Sbjct: 216 FGSLKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQSMNGEWLGGRAIRCNWASHK 272
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVGNL ++VD E L FE+ G + ++ +R T RS+GFG+V TVE A A+
Sbjct: 269 LFVGNLSWNVDEEWLGREFEEFGPKAV-RIVTDRATGRSKGFGYVEFETVEAATAALNAK 327
Query: 222 HRYDIDGRLLTVNKAAPR--GTQPE-----RAPRVFE----PGFRIYVGNLPWEVDNARL 270
D+D R L ++ + PR G P RA + + P ++VGNL ++ +
Sbjct: 328 KGTDLDNRPLNLDFSTPRPEGQNPRDRASSRASQHGDVPSRPSDTLFVGNLSFDATPDSV 387
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
++F E+G + + E G +GFG+V SS E A AL G L+GR++R++ A
Sbjct: 388 TEIFQEYGTITRVSLPTKPEDGMPKGFGYVGFSSVEEAQGAFEALQGAELNGRSMRLDFA 447
Query: 331 EDR 333
R
Sbjct: 448 APR 450
>gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryza sativa Japonica Group]
Length = 391
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 97/174 (55%), Gaps = 8/174 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GFV + E+A+ A
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G +++GNL +VD L FS
Sbjct: 83 IKILNMIKLYGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
G +V N +++ D ETG SRGFGFV+ S + AI A++ Q+L R I V+ A
Sbjct: 136 GVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYA 189
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G + +++ + ET SRGFGFV+ + E +++A+
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNNQHLCNRPITVSYAYKKDTKGER 198
>gi|308081546|ref|NP_001183096.1| uncharacterized protein LOC100501457 [Zea mays]
gi|238009292|gb|ACR35681.1| unknown [Zea mays]
gi|414871228|tpg|DAA49785.1| TPA: hypothetical protein ZEAMMB73_160597 [Zea mays]
Length = 359
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 98/177 (55%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GFV + E+A+ A
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G +++GNL +VD L FS
Sbjct: 83 IKILNMIKLYGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G +V N +++ D ETG SRGFGFV+ S + AI A++ Q+L R I V+ A +
Sbjct: 136 GVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 257 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 317 GQNLDGRAIRVNVAEDRQR 335
L G+ IRVN A ++
Sbjct: 88 MIKLYGKPIRVNKASQDKK 106
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G + +++ + ET SRGFGFV+ + E +++A+
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNNQHLCNRPITVSYAYKKDTKGER 198
>gi|213406493|ref|XP_002174018.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
gi|212002065|gb|EEB07725.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
Length = 690
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 92/179 (51%), Gaps = 13/179 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFV NL + S L F A V+ A V+ ++ET +S+GFGFVT S E+A +A+E
Sbjct: 9 LFVRNLTFSTTSNDLTDFFSNAAPVKHAVVVTDKETGQSKGFGFVTFSLHEDAVRALEEL 68
Query: 222 HRYDIDGRLLTVNKAAPRG---------TQPERAPRVFEPGFRIYVGNLPWEVDNAR-LE 271
+DGR+L + AAPR +PE+ + P R+ V NLPW V + LE
Sbjct: 69 KNKKLDGRILRMEFAAPRKRNGETSDKPKKPEQVRKDTRP--RLIVRNLPWSVKKPKHLE 126
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
F++ GKV +V + GR GF FV M A+ L+ +DGR + V+ A
Sbjct: 127 PYFAKFGKVREIKVP-TKGGGRMCGFAFVWMKDRASAQKAMDTLNATEIDGRVVAVDWA 184
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++V NL + + L FS V +A VV D+ETG+S+GFGFVT S + A+ L
Sbjct: 9 LFVRNLTFSTTSNDLTDFFSNAAPVKHAVVVTDKETGQSKGFGFVTFSLHEDAVRALEEL 68
Query: 316 DGQNLDGRAIRVNVAEDRQR 335
+ LDGR +R+ A R+R
Sbjct: 69 KNKKLDGRILRMEFAAPRKR 88
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 161 KLFVGNLPYDVDSEK-LAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+L V NLP+ V K L F K G V +V + R GF FV M A+KA++
Sbjct: 109 RLIVRNLPWSVKKPKHLEPYFAKFGKVREIKV-PTKGGGRMCGFAFVWMKDRASAQKAMD 167
Query: 220 MFHRYDIDGRLLTVNKAAPR 239
+ +IDGR++ V+ A +
Sbjct: 168 TLNATEIDGRVVAVDWAVSK 187
>gi|90399074|emb|CAJ86296.1| H0124B04.13 [Oryza sativa Indica Group]
Length = 913
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
++ L+VGNLP V S KL LF G + + V+ + T S+G+GFV S A +A
Sbjct: 207 DNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEA 266
Query: 218 VEMFHRYDIDGRLLTVNKAA-PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + ++GR L V A P + P ++YV NL ++ RL +F
Sbjct: 267 IKRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLP 326
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
G+V NA+V D TG S+G+GFV SS +A+ L+G+ +DGR I V V+
Sbjct: 327 FGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVS 380
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 12/181 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
AKL+V NL +++++L LF G V A+V + T S+G+GFV S+ A +AV
Sbjct: 304 AKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVI 363
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF----------RIYVGNLPWEVDNAR 269
+ +DGR + V + T P A V P +YV N+P +D +
Sbjct: 364 HLNGRLVDGRKIEVRVSGIPSTLPNSA--VESPSTTRTVKEIDMSNLYVCNMPSSIDTKK 421
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L ++F GK+ +ARVV D +T ++G+GF+ + AIAA++G + G I V V
Sbjct: 422 LVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIVRV 481
Query: 330 A 330
A
Sbjct: 482 A 482
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG +P + ++ LF G V A + R + +G V A A++
Sbjct: 591 ANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF------RFQRYGMVRFDNPSCAAAAID 644
Query: 220 MFHRYDIDGRLLTVNKA-------APRGTQPERAPRVFEPG----FRIYVGNLPWEVDNA 268
Y I G +L V A A +G + E G +YV +LP V+N
Sbjct: 645 HLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSS-NEQGQIDMTNLYVSHLPSYVNNE 703
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
RL +F G++ A+VV +R TG S+GFGFV + A+ ++G LDG + V
Sbjct: 704 RLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVR 763
Query: 329 VA 330
+A
Sbjct: 764 IA 765
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+ L+V N+P +D++KL LF G + A V+ + +T ++G+GF+ + E A KA+
Sbjct: 406 SNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIA 465
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP-----GFRIYVGNLPWEVDNARLEQVF 274
+ + G ++ V A G P + + R+Y+ NLP + ++ +F
Sbjct: 466 AMNGALVGGEMIIVRVA---GLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLF 522
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ G++ +V+ + E + V + A+ +DG ++G+ + V +E
Sbjct: 523 APFGQIT--KVLMNLE------YSLVWYADAPSAIKAVQHMDGYMVEGKRLVVKRSE 571
>gi|406601704|emb|CCH46665.1| putative RNA-binding protein [Wickerhamomyces ciferrii]
Length = 479
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 23/180 (12%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
AK+F+G L +D E+L F K G V ++ T RSRGFGF+T + ++ V+
Sbjct: 128 AKMFIGGLDWDTSEERLKEYFSKFGEVIDHTIMRESSTGRSRGFGFLTFAEPRSVDEVVK 187
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H +DG+++ +A PR Q + +I+VG + EV E F + G
Sbjct: 188 TEHV--LDGKVIDPKRAIPRDEQDKTG--------KIFVGGIAPEVRPKEFENFFGKFGT 237
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD----GQNLD--GRAIRVNVAEDR 333
+++A+++ D++TGRSRGFGFVT DA A+D G+ LD GR I V AE R
Sbjct: 238 IIDAQLMLDKDTGRSRGFGFVTF-------DAPDAVDRVCQGRYLDFNGRQIEVKRAEPR 290
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + +V ++ F K GT+ A+++ +++T RSRGFGFVT + ++ +
Sbjct: 212 GKIFVGGIAPEVRPKEFENFFGKFGTIIDAQLMLDKDTGRSRGFGFVTFDAPDAVDRVCQ 271
Query: 220 MFHRY-DIDGRLLTVNKAAPRG 240
RY D +GR + V +A PRG
Sbjct: 272 --GRYLDFNGRQIEVKRAEPRG 291
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 18/198 (9%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
EE E +FVG L + + +E L FE G + A V+ +RET +SRGFG+V
Sbjct: 279 EEAAGSTEIKNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVD 338
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVNKAAPR------GTQPERA--PRVFEPGFRIYVGNLP 262
A+ A+EM ++DGR + V+ +APR G P++ + P ++VGNL
Sbjct: 339 AAGAKAALEMAG-TELDGRTINVDLSAPRPPRDGPGATPKKQFNDELSAPSQTVFVGNLS 397
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD------ 316
+E + + FS+ G V + RV D ETGR +GF +V +++ A A+D
Sbjct: 398 FESTQDAVWESFSDFGGVNSVRVPTDMETGRPKGFAYVEFG---DVDSAKKAVDQGRSSE 454
Query: 317 GQNLDGRAIRVNVAEDRQ 334
G +DGR +R++ ++ RQ
Sbjct: 455 GLEIDGRRVRLDFSQPRQ 472
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VG L W + N L++ F G++V+ARVV DRETG+SRGFG+V + A AAL
Sbjct: 290 VFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDF---VDAAGAKAAL 346
Query: 316 D--GQNLDGRAIRVNVAEDRQRR 336
+ G LDGR I V+++ R R
Sbjct: 347 EMAGTELDGRTINVDLSAPRPPR 369
>gi|356538787|ref|XP_003537882.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 170
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
FR +VG L W N LE+ FS +G +V ++V+ DRETGRSRGFGFVT +SE + DAIA
Sbjct: 8 FRCFVGGLAWVTGNDALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQSMKDAIA 67
Query: 314 ALDGQNLDGRAIRVNVAEDRQRR 336
++GQ+LDGR I VN A+ R R
Sbjct: 68 GMNGQDLDGRNITVNEAQTRASR 90
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + ++ L F G + ++VI +RET RSRGFGFVT ++ + + A+
Sbjct: 9 RCFVGGLAWVTGNDALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQSMKDAIAG 68
Query: 221 FHRYDIDGRLLTVNKAAPRGTQ 242
+ D+DGR +TVN+A R ++
Sbjct: 69 MNGQDLDGRNITVNEAQTRASR 90
>gi|449436976|ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449497014|ref|XP_004160289.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 300
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 10/186 (5%)
Query: 150 EEEFVEPPEDA------KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEV-IYNRETDRSRG 202
++E V P D +L N+P+D E + LFEK GTV E+ +YN+ R+RG
Sbjct: 83 QDEAVSSPSDTEEFSQTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNK--IRNRG 140
Query: 203 FGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLP 262
FVTM + EEA A+ Y+ +GR L +N A + +P + F ++V NLP
Sbjct: 141 LAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPVTFNLFVANLP 200
Query: 263 WEVDNARLEQVF-SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLD 321
++ L++ F S G VV+A+++++ RS G+GFV ++ + AI+ G+
Sbjct: 201 FDARAKDLKEFFDSGSGNVVSAQIIFNENPRRSSGYGFVAFKTKKDAEAAISEFQGKTFM 260
Query: 322 GRAIRV 327
GR++RV
Sbjct: 261 GRSLRV 266
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEK-AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
LFV NLP+D ++ L F+ +G V A++I+N RS G+GFV T ++AE A+
Sbjct: 194 LFVANLPFDARAKDLKEFFDSGSGNVVSAQIIFNENPRRSSGYGFVAFKTKKDAEAAISE 253
Query: 221 FHRYDIDGRLLTVNKA 236
F GR L V ++
Sbjct: 254 FQGKTFMGRSLRVARS 269
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARV-VYDRETGRSRGFGFVTMSSETELNDAIA 313
R+ N+PW+ + +F ++G V++ + +Y++ R+RG FVTM S E A+
Sbjct: 100 RLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMGSPEEALAALN 157
Query: 314 ALDGQNLDGRAIRVNVAE 331
L+ +GR +R+N A+
Sbjct: 158 NLESYEFEGRTLRLNYAK 175
>gi|412986331|emb|CCO14757.1| predicted protein [Bathycoccus prasinos]
Length = 290
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Query: 142 SGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSR 201
SG V E E + +VGNL ++ D + L + G + + + RS+
Sbjct: 95 SGGAPVQRPTNLPEAEEGCRCYVGNLAWETDEQALIEHCQTIGHPVLRCEVARQSGGRSK 154
Query: 202 GFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----GFRIY 257
G+ + ++ E A+ V+ H + R + V P G + PR P G +I
Sbjct: 155 GWALIDFASKEAADAGVKALHDTECRARSIIVRAERPGGAAATKPPREIRPENSSGLQIV 214
Query: 258 VGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDG 317
V NLPW + L QVF + G VV+A+ +TGRS+G+G V ++ + AIA +G
Sbjct: 215 VRNLPWSTTSDDLRQVFQQVGTVVDAKSTCHDDTGRSKGWGTVLFETQEQAQAAIAGFNG 274
Query: 318 QNLDGRAIRVNV 329
L+GR +++ +
Sbjct: 275 VELEGRPMQIKI 286
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 28/192 (14%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E P+ +L+VGN+P+ E+L LF A +EI N RSRG+ V+ S A
Sbjct: 4 EQPQSNRLYVGNIPWSTTVEELQGLFTDAENIEIPTGRQN----RSRGYALVSFSDESAA 59
Query: 215 EKAVEMFHRYDIDGRLLTVN---------KAAPRGT------QPERAPRVFEPGFRIYVG 259
+ A++ + + + R ++V K++ RG+ +P P E G R YVG
Sbjct: 60 QSAMQAMNGHALGDRNISVRADNPLPKAPKSSSRGSGGAPVQRPTNLPEA-EEGCRCYVG 118
Query: 260 NLPWEVDNARLEQVFSEHGKVVNARV----VYDRETGRSRGFGFVTMSSETELNDAIAAL 315
NL WE D EQ EH + + V V + GRS+G+ + +S+ + + AL
Sbjct: 119 NLAWETD----EQALIEHCQTIGHPVLRCEVARQSGGRSKGWALIDFASKEAADAGVKAL 174
Query: 316 DGQNLDGRAIRV 327
R+I V
Sbjct: 175 HDTECRARSIIV 186
>gi|302769522|ref|XP_002968180.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
gi|300163824|gb|EFJ30434.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
Length = 296
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 12/183 (6%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P KLFV L ++ S+ L FE+ G +E VI ++ T +SRGFGF+T ++ A++
Sbjct: 30 PAHRKLFVRGLAWETTSQDLREAFEQFGEIEEGAVIIDKATGKSRGFGFITFKHMDSAQR 89
Query: 217 AVEMFHRYDIDGRLLTVNKAA----PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
A++ + IDGR+ N A+ G ++A R ++Y+G L +E N L
Sbjct: 90 ALKEPSK-TIDGRITVCNLASVGTSGSGGTNDQAQR------KLYIGGLSYETSNETLLN 142
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
+FS++G++ V YD+ T +SRGF FVT + +AI + + ++GR + V +A +
Sbjct: 143 IFSKYGEIEEGAVAYDKNTNKSRGFAFVTYKTVEAARNAIDDPN-KTIEGRHVIVKLAAE 201
Query: 333 RQR 335
Q+
Sbjct: 202 GQK 204
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL++G L Y+ +E L +F K G +E V Y++ T++SRGF FVT TVE A A++
Sbjct: 125 KLYIGGLSYETSNETLLNIFSKYGEIEEGAVAYDKNTNKSRGFAFVTYKTVEAARNAIDD 184
Query: 221 FHRYDIDGRLLTVNKA-------APRGTQPERAPRVFEPGFRIYVGNLP 262
++ I+GR + V A AP+ + P + P+ +PG+ + N+P
Sbjct: 185 PNK-TIEGRHVIVKLAAEGQKEKAPQVSAPSQGPQA-QPGYNVVNPNIP 231
>gi|301119623|ref|XP_002907539.1| nucleolin, putative [Phytophthora infestans T30-4]
gi|262106051|gb|EEY64103.1| nucleolin, putative [Phytophthora infestans T30-4]
Length = 496
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 14/203 (6%)
Query: 134 EAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIY 193
+AGE+ ++ ++ + P + ++F+ LP+ +++ F G V A +
Sbjct: 223 DAGEKSNKAHKQENGDAAAVANPQKTLEIFIAGLPWSATEDEVKEHFAGCGEVTGARIPL 282
Query: 194 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT---QPERAPRVF 250
+ RS G FVT +T E AE A+ M + D GR + + A + +PE VF
Sbjct: 283 --QNGRSSGTAFVTFATSEAAEAALAMDGQ-DFGGRWMKIRTAEKKNMFDEKPEGCTSVF 339
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
+GNL W+VD + + F E G++++ R+ DRETG RGFG V +S TE D
Sbjct: 340 -------IGNLSWDVDENTVRETFGECGEILSCRLATDRETGEFRGFGHVDFAS-TEAVD 391
Query: 311 AIAALDGQNLDGRAIRVNVAEDR 333
L G ++GRAIRVN A+ R
Sbjct: 392 EAVKLAGSYVNGRAIRVNYAKSR 414
>gi|357146461|ref|XP_003574000.1| PREDICTED: splicing factor 3B subunit 4-like [Brachypodium
distachyon]
Length = 359
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 98/177 (55%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GFV + E+A+ A
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G +++GNL EVD L FS
Sbjct: 83 IKILNMLKLYGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPEVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G +V N +++ D ETG SRGFGFV+ S + AI A++ Q+L R I V+ A +
Sbjct: 136 GVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 257 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 317 GQNLDGRAIRVNVAEDRQR 335
L G+ IRVN A ++
Sbjct: 88 MLKLYGKPIRVNKASQDKK 106
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL +VD + L F G + +++ + ET SRGFGFV+ + E +++A+
Sbjct: 112 ANLFIGNLDPEVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNNQHLCNRPITVSYAYKKDTKGER 198
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 98/173 (56%), Gaps = 5/173 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+++VG L ++VD++ L E G V A V +R T +SRGFG+V +T A+KA E
Sbjct: 208 QVWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFEE 267
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFE-----PGFRIYVGNLPWEVDNARLEQVFS 275
++DGR + ++ + P+G E + F P +++GNL +++ + FS
Sbjct: 268 GQGKEVDGRAIRLDLSTPKGDVTENRAKKFNDQRSAPSSTLFIGNLSFDISEDDVWNAFS 327
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
EHG+V R+ D ++GR +GFG+V +++ A+ A+ GQ L GR +R++
Sbjct: 328 EHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAALDAMTGQELAGRPLRLD 380
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG L W VDN L+ G+V +ARV DR TG+SRGFG+V ++ A
Sbjct: 208 QVWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFEE 267
Query: 315 LDGQNLDGRAIRVNVA 330
G+ +DGRAIR++++
Sbjct: 268 GQGKEVDGRAIRLDLS 283
>gi|302788860|ref|XP_002976199.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
gi|300156475|gb|EFJ23104.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
Length = 343
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 12/183 (6%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P KLFV L ++ S+ L FE+ G +E VI ++ T +SRGFGF+T ++ A++
Sbjct: 77 PAHRKLFVRGLAWETTSQDLRDAFEQFGEIEEGAVIIDKATGKSRGFGFITFKHMDSAQR 136
Query: 217 AVEMFHRYDIDGRLLTVNKAA----PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
A++ + IDGR+ N A+ G ++A R ++Y+G L +E N L
Sbjct: 137 ALKEPSK-TIDGRITVCNLASVGTSGSGGTNDQAQR------KLYIGGLSYETSNETLLN 189
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
+FS++G++ V YD+ T +SRGF FVT + +AI + + ++GR + V +A +
Sbjct: 190 IFSKYGEIEEGAVAYDKNTNKSRGFAFVTYKTVEAARNAIDDPN-KTIEGRHVIVKLAAE 248
Query: 333 RQR 335
Q+
Sbjct: 249 GQK 251
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL++G L Y+ +E L +F K G +E V Y++ T++SRGF FVT TVE A A++
Sbjct: 172 KLYIGGLSYETSNETLLNIFSKYGEIEEGAVAYDKNTNKSRGFAFVTYKTVEAARNAIDD 231
Query: 221 FHRYDIDGRLLTVNKA-------APRGTQPERAPRVFEPGFRIYVGNLP 262
++ I+GR + V A AP+ + P + P+ +PG+ + N+P
Sbjct: 232 PNK-TIEGRHVIVKLAAEGQKEKAPQVSAPSQGPQA-QPGYNVVNPNIP 278
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 101/180 (56%), Gaps = 8/180 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GFV + E+A+ A
Sbjct: 23 QDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNSHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA +Q +++ V G +++GNL +VD L FS
Sbjct: 83 IKVLNMIKLYGKPIRVNKA----SQDKKSVDV---GANLFIGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
G +V N +++ D ETG SRGFGF++ S + AI A++GQ L R I V+ A + +
Sbjct: 136 GVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G + +++ + ET SRGFGF++ + E ++ A+
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
gi|241920989|gb|EER94133.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
Length = 355
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 98/177 (55%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GFV + E+A+ A
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G +++GNL +VD L FS
Sbjct: 83 IKILNMIKLYGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G +V N +++ D ETG SRGFGFV+ S + AI A++ Q+L R I V+ A +
Sbjct: 136 GVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 257 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 317 GQNLDGRAIRVNVAEDRQR 335
L G+ IRVN A ++
Sbjct: 88 MIKLYGKPIRVNKASQDKK 106
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G + +++ + ET SRGFGFV+ + E +++A+
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNNQHLCNRPITVSYAYKKDTKGER 198
>gi|160333518|ref|NP_001103836.1| poly A binding protein, cytoplasmic 5 [Rattus norvegicus]
gi|149055477|gb|EDM07061.1| rCG38154 [Rattus norvegicus]
Length = 382
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 98/184 (53%), Gaps = 13/184 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV N D+D EKL LF + G E +VI + T +S+GFGFV T E A+KAV
Sbjct: 201 VFVKNFGDDIDDEKLKKLFSEYGPTESVKVIRD-ATGKSKGFGFVRYETHEAAQKAVLEL 259
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
H IDG++L V +A + + R FE PG IY+ NL +++ +L+
Sbjct: 260 HGKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKDKTRPPGVPIYIKNLDETINDEKLK 319
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + A+V+ E G+ +GFG V SS E + A+ ++G+ + + + V + +
Sbjct: 320 EEFSLFGSISRAKVMM--EVGQGKGFGVVCFSSFEEASKAVNEMNGRVVGSKTLHVTLGQ 377
Query: 332 DRQR 335
R R
Sbjct: 378 ARHR 381
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 4/176 (2%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D+ L LF G + +V+ + + S+G+ +V ++ A +A+
Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFDSLAAANRAIWHM 165
Query: 222 HRYDIDGRLLTVNKAA-PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ ++ R + V + P E R ++V N ++D+ +L+++FSE+G
Sbjct: 166 NGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNFGDDIDDEKLKKLFSEYGPT 225
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+ +V+ D TG+S+GFGFV + A+ L G+++DG+ + V A+ + R
Sbjct: 226 ESVKVIRD-ATGKSKGFGFVRYETHEAAQKAVLELHGKSIDGKVLCVGRAQKKIER 280
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 164 VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHR 223
VG+L DV + L F AG + + + T G+G+V +AE A+ +
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 224 YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNA 283
I+G+ + +QP+ R G I++ NL +DN L +FS G +++
Sbjct: 82 DLINGKPFRL-----MWSQPDDHLRKSGVG-NIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 284 RVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+VV D + G S+G+ +V S N AI ++G L+ R + V
Sbjct: 136 KVVCD-DNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV 177
>gi|297834512|ref|XP_002885138.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330978|gb|EFH61397.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 542
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 11/184 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL ++ + L LF + GTV + V+ RSRGFGFV E A+KAV+
Sbjct: 202 VYVKNLIENITEDILHRLFSQYGTVS-SVVVMRDGMGRSRGFGFVNFCHPENAKKAVDSL 260
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF---------RIYVGNLPWEVDNARLEQ 272
H + + L V KA R + E + F +YV NL +++ L +
Sbjct: 261 HGRQVGSKTLFVGKALKRDERREMLKHKYRDNFIAKSNMRWSNLYVKNLSESMNDTTLRE 320
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
+F +G++V+A+V+ E GRS+GFGFV S+ E A L+G ++DG+ + V VAE
Sbjct: 321 IFGRYGQIVSAKVM-RHENGRSKGFGFVCFSNREESKQAKRYLNGFSVDGKLLVVRVAER 379
Query: 333 RQRR 336
++ R
Sbjct: 380 KEDR 383
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 82/176 (46%), Gaps = 7/176 (3%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+V NL + S L +F G + +V+ E +S+GFGFV T + A A
Sbjct: 112 LYVKNLDISITSSGLERMFNPFGVILSCKVV--EENGQSKGFGFVQFETEQSAVTARSAL 169
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKV 280
H +DG+ L V K + ER GF +YV NL + L ++FS++G V
Sbjct: 170 HGSMVDGKKLFVAKFINKN---ERVAMAGNKGFTNVYVKNLIENITEDILHRLFSQYGTV 226
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+ V+ D GRSRGFGFV A+ +L G+ + + + V A R R
Sbjct: 227 SSVVVMRD-GMGRSRGFGFVNFCHPENAKKAVDSLHGRQVGSKTLFVGKALKRDER 281
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L DV + L F V + N T +S + ++ + A A+
Sbjct: 21 ASLYVGDLSPDVTEQDLIHRFSLTVPVLSVHLCRNSVTGKSLCYAYINFDSPFSASNAMA 80
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ D+ G+ + + + R R GF +YV NL + ++ LE++F+ G
Sbjct: 81 RLNHTDLKGKAMRI-MWSQRDLSYRR-----RTGFGNLYVKNLDISITSSGLERMFNPFG 134
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+++ +VV E G+S+GFGFV +E A +AL G +DG+ + V
Sbjct: 135 VILSCKVV--EENGQSKGFGFVQFETEQSAVTARSALHGSMVDGKKLFV 181
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+ L+V NL ++ L +F + G + A+V+ E RS+GFGFV S EE+++A
Sbjct: 302 SNLYVKNLSESMNDTTLREIFGRYGQIVSAKVM-RHENGRSKGFGFVCFSNREESKQAKR 360
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIY 257
+ + +DG+LL V A + + +R + F R Y
Sbjct: 361 YLNGFSVDGKLLVVRVAERKEDRLKRLQQYFHAQPRHY 398
>gi|452821825|gb|EME28851.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 149
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 62/82 (75%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R++VG LPW V L + FS++G+VV+ARVV +RETGRSRGFGFV+ + + + + IAA
Sbjct: 8 RVFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSSVEECIAA 67
Query: 315 LDGQNLDGRAIRVNVAEDRQRR 336
LDGQ++ GR IRVN A R++R
Sbjct: 68 LDGQDMQGRTIRVNKAMSREQR 89
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED ++FVG LP+ V + L F K G V A V+ RET RSRGFGFV+ + E+
Sbjct: 5 EDNRVFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSSVEEC 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPR 239
+ D+ GR + VNKA R
Sbjct: 65 IAALDGQDMQGRTIRVNKAMSR 86
>gi|412985322|emb|CCO20347.1| predicted protein [Bathycoccus prasinos]
Length = 789
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRS-RGFGFVTMSTVEEA 214
P + KL+V NLP V +E+L +FEK G V +V+ +R+ S +GF FVT +T EA
Sbjct: 503 PDDKNKLYVANLPPHVTNEQLRPIFEKFGRVTACDVVPDRDKQLSCKGFAFVTFATEVEA 562
Query: 215 EKAVEMFHRYDIDGRLL-TVNKAAPR-----GTQPERAPRVFEPGFRIYVGNLPWEVDNA 268
A+ + I+GR++ T K P+ + + A ++YV NLP +
Sbjct: 563 RSAIPHTNGMTIEGRVVETRIKNEPKVPIHNASGGDTAQEDVNEEAKLYVANLPSHYEEE 622
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG--RAIR 326
L+ +FS +G V + ++V D TG S+G+GFV M + + A+ A+ G ++G + +
Sbjct: 623 DLKTLFSPYGLVQSVKLVLDHTTGLSKGYGFVQMMDQEQAMSAVVAVHGNMVEGCTKPLV 682
Query: 327 VNVAEDRQR 335
VN+A D++R
Sbjct: 683 VNIANDKKR 691
>gi|322708692|gb|EFZ00269.1| cutinase negative acting protein [Metarhizium anisopliae ARSEF 23]
Length = 509
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 150 EEEFVEPPEDAK------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGF 203
+EE P+ AK LF GNL +++D LA F++ + A V+ +R+ RSRGF
Sbjct: 244 DEEIDATPKKAKTEGAPTLFAGNLSWNIDDNALAEAFKEFEGLVGARVVTDRDGGRSRGF 303
Query: 204 GFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA-------PRGTQPERAPR----VFEP 252
G+V T E A KA E +++DGR L ++ A PR +RA + V
Sbjct: 304 GYVDFETPEAATKAYEAMQGFELDGRPLNLDYANTRPAESNPRDRATDRAKKHGDSVSPE 363
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
+++GNLP++ D + Q F+E +V + R+ D ++G +GFG+V+ +S +
Sbjct: 364 SETLFIGNLPFDTDQETVRQFFAEVAEVTSVRLPTDPDSGNLKGFGYVSFNSVEDAKTVF 423
Query: 313 AALDGQNLD----GRAIRVNVAEDRQRRS 337
L+G +L R++R++ A R ++S
Sbjct: 424 QQLNGASLGNGRMSRSVRLDFASSRPQQS 452
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 135 AGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYN 194
G + G +++ EP KLF+G L Y + L FEK G + V+ +
Sbjct: 2 GGHNDQNGNSNGQHDDDSITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKD 61
Query: 195 RETDRSRGFGFVTM---STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 251
T RSRGFGF+T S V+EA+KA + IDGR++ +A PR Q +P
Sbjct: 62 PRTKRSRGFGFITYSHSSMVDEAQKA----RPHKIDGRVVEPKRAVPR--QEIDSPNAGA 115
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
+++VG L + D L F +G +V+ +V D+ETG+ RGF FV + D
Sbjct: 116 TVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPV-DK 174
Query: 312 IAALDGQNLDGRAIRVNVAEDRQ 334
+ L+G+ + V A +Q
Sbjct: 175 VVLQKQHQLNGKMVDVKKALPKQ 197
>gi|50555934|ref|XP_505375.1| YALI0F13475p [Yarrowia lipolytica]
gi|49651245|emb|CAG78182.1| YALI0F13475p [Yarrowia lipolytica CLIB122]
Length = 422
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 10/176 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG L ++VD + L F AG V A VI + T RS+GFG+V ++ +A+K VE F
Sbjct: 170 VFVGGLSWNVDDDWLTKEFADAGAVS-ARVITEKATGRSKGFGYVDFASGADAQKCVEEF 228
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPR---------VFEPGFRIYVGNLPWEVDNARLEQ 272
+IDGR + ++ + PE+ R + EP ++VGNL ++ + L
Sbjct: 229 QDKEIDGRTVRLDISTNVRQTPEQKQRDRSSQYGDQLSEPADTLFVGNLSFDTNRDDLFG 288
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+F E+G VV+ R+ ET + +GFG+V S E A+ L G GR+ R++
Sbjct: 289 IFGEYGSVVSIRLPTHPETEQPKGFGYVQFGSVDEAKAALEGLSGYEYLGRSFRLD 344
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VG L W VD+ L + F++ G V+ARV+ ++ TGRS+GFG+V +S + +
Sbjct: 170 VFVGGLSWNVDDDWLTKEFADAG-AVSARVITEKATGRSKGFGYVDFASGADAQKCVEEF 228
Query: 316 DGQNLDGRAIRVNVA-------EDRQR-RSS 338
+ +DGR +R++++ E +QR RSS
Sbjct: 229 QDKEIDGRTVRLDISTNVRQTPEQKQRDRSS 259
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVGNL +D + + L +F + G+V + + ET++ +GFG+V +V+EA+ A+E
Sbjct: 272 LFVGNLSFDTNRDDLFGIFGEYGSVVSIRLPTHPETEQPKGFGYVQFGSVDEAKAALEGL 331
Query: 222 HRYDIDGRLLTVNKAAPR 239
Y+ GR ++ +P+
Sbjct: 332 SGYEYLGRSFRLDYTSPK 349
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 14/188 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNR-ETDRSRGFGFVTMSTVEEAEKAVEM 220
++V N+ + D +KL F GT I+ + ++ E+ +SRGFGFV E+A KAVE
Sbjct: 230 VYVKNINLNWDEDKLRETFSPFGT--ISSIFLSKDESGKSRGFGFVNFEKHEDAVKAVEE 287
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARL 270
+ DIDG+ L V +A + + E +E G+ ++V NL +D+A+L
Sbjct: 288 LNNKDIDGQKLYVGRAQKKSERMESLKHQYEAARQEQLNKYQGYNLFVKNLDDSIDDAKL 347
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
E+ F +G + +A+V+ D + G+S+GFGFV SS E AI + + + G+ + V +A
Sbjct: 348 EEEFKPYGTITSAKVMLD-DAGKSKGFGFVCYSSPEEATKAITEMHQRMVAGKPLYVALA 406
Query: 331 EDRQRRSS 338
+ ++ R S
Sbjct: 407 QRKEVRRS 414
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG L V L +F G V V + + +S G+ +V + + EKA+E
Sbjct: 47 ASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSHADGEKALE 106
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I G+ A R +R P + G I++ NL +DN L FS G
Sbjct: 107 ELNYTPIKGK-------ACRIMWSQRDPSLRRNGSGNIFIKNLHPAIDNKTLHDTFSAFG 159
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN---VAEDRQR 335
K+++ ++ D E G S+GFGFV AI ++G L+ + V +DRQ
Sbjct: 160 KILSCKIATD-ENGNSKGFGFVHYEESESAKAAIENVNGMLLNDHEVYVGPHLAKKDRQS 218
Query: 336 R 336
+
Sbjct: 219 K 219
>gi|67537390|ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|40741753|gb|EAA60943.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|259482272|tpe|CBF76595.1| TPA: nucleolin protein Nsr1, putative (AFU_orthologue;
AFUA_3G07710) [Aspergillus nidulans FGSC A4]
Length = 524
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 15/188 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LFVGNL ++V E L FE+ G + A ++ R+T RSRGFG+V + +A KA E
Sbjct: 277 ANLFVGNLSWNVTEEWLHQEFEQFGELS-ARIMTERDTGRSRGFGYVEFTNAADAAKAYE 335
Query: 220 MFHRYDIDGRLLTVNKAAPR------GTQPERA---PRVF----EP-GFRIYVGNLPWEV 265
++IDGR + ++ A R G ERA R F P ++VGNLP+
Sbjct: 336 AMKEHEIDGRKINLDYATGRPANKDQGGFKERAQNRARSFGDQTSPESDTLFVGNLPFSA 395
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
+ + +VF G V+ R+ D E+GR +GFG+V SS E A L G +DGR I
Sbjct: 396 NEDSVHEVFGPQGNVLGIRLPTDMESGRPKGFGYVQYSSVDEARKAYNELQGAEIDGRPI 455
Query: 326 RVNVAEDR 333
R++ + R
Sbjct: 456 RLDFSTPR 463
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G L + D+ L + F ++G+V+ ARV+ DRETGRSRGFGFVT +S E + AI A
Sbjct: 41 KLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQA 100
Query: 315 LDGQNLDGRAIRVNVAEDRQR 335
LDGQ+L GR +RVN A DR R
Sbjct: 101 LDGQDLHGRRVRVNYATDRAR 121
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 48/86 (55%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
+ +KLF+G L Y D L F K G V A VI +RET RSRGFGFVT ++ EE
Sbjct: 34 IRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEE 93
Query: 214 AEKAVEMFHRYDIDGRLLTVNKAAPR 239
A A++ D+ GR + VN A R
Sbjct: 94 ASSAIQALDGQDLHGRRVRVNYATDR 119
>gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|31432465|gb|AAP54095.1| Splicing factor 3B subunit 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113639368|dbj|BAF26673.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|215737182|dbj|BAG96111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184664|gb|EEC67091.1| hypothetical protein OsI_33883 [Oryza sativa Indica Group]
Length = 355
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 98/177 (55%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GFV + E+A+ A
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G +++GNL +VD L FS
Sbjct: 83 IKILNMIKLYGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G +V N +++ D ETG SRGFGFV+ S + AI A++ Q+L R I V+ A +
Sbjct: 136 GVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 257 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 317 GQNLDGRAIRVNVAEDRQR 335
L G+ IRVN A ++
Sbjct: 88 MIKLYGKPIRVNKASQDKK 106
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G + +++ + ET SRGFGFV+ + E +++A+
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNNQHLCNRPITVSYAYKKDTKGER 198
>gi|327305247|ref|XP_003237315.1| nucleic acid-binding protein [Trichophyton rubrum CBS 118892]
gi|326460313|gb|EGD85766.1| nucleic acid-binding protein [Trichophyton rubrum CBS 118892]
Length = 293
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 12/186 (6%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP A ++VGN+ +D+ + L K G V +IY+ SRGFG+V +VEEA
Sbjct: 77 EPQPKATVYVGNILFDITAADLKEYASKYGKVLGTRIIYD-SRGLSRGFGYVKFESVEEA 135
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
+KA++ H + +GR L+VN A R QP+R EP I+VGN+ +V + L
Sbjct: 136 KKAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRK---MEPTRTIFVGNIAHQVTDRDLHA 192
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA---LDGQNLDGRAIRVNV 329
+F + V + RV DR TG RGF T++ AIA L GQ GR +R++
Sbjct: 193 LFDDIPNVFDVRVAVDRRTGMPRGFAHAEF---TDVESAIAGFEMLKGQAPYGRPLRLDY 249
Query: 330 AEDRQR 335
+ +R
Sbjct: 250 SHSARR 255
>gi|354484923|ref|XP_003504635.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 672
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 104/188 (55%), Gaps = 13/188 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL D+D + L LF + G ++ +V+ + +SRGFGFV EEA+KAV+
Sbjct: 256 VYVKNLHMDMDEQGLQDLFSQFGKMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVDHM 314
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ ++ G+LL V +A R + R FE G +YV NL +++ RL+
Sbjct: 315 NGKEVRGQLLYVGRAQKRAERQSELKRRFEQVKQERQNRYQGVNLYVKNLDDSINDERLK 374
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+VFS +G + +A+V+ E+ S+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 375 EVFSAYGVITSAKVM--TESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 432
Query: 332 DRQRRSSF 339
++ R +
Sbjct: 433 RKEERKAI 440
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+ L+VG+L DV L +F GT+ V + T RS G+ ++ +AE+A++
Sbjct: 74 SSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALD 133
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I G+ + + + R P + + G I++ NL +DN L FS G
Sbjct: 134 TMNFEMIKGQPIRIMWS-------HRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFG 186
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++++VVY+ E G SRGFGFV + AI ++G L+ R + V + RQ+R
Sbjct: 187 SILSSKVVYN-EHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKR 242
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 15/86 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ L+V NL ++ E+L +F G + A+V+ E+ S+GFGFV S+ EEA KA
Sbjct: 355 QGVNLYVKNLDDSINDERLKEVFSAYGVITSAKVM--TESSHSKGFGFVCFSSPEEATKA 412
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQP 243
V +++GR++ GT+P
Sbjct: 413 VT-----EMNGRIV--------GTKP 425
>gi|254566735|ref|XP_002490478.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|238030274|emb|CAY68197.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|328350869|emb|CCA37269.1| Nuclear polyadenylated RNA-binding protein 4 [Komagataella pastoris
CBS 7435]
Length = 462
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 95/179 (53%), Gaps = 11/179 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E K+F+G L ++ E L F + G + ++ + T RSRGFGF+T + ++
Sbjct: 151 EQGKMFIGGLNWETTEETLRNYFGQFGDITDLTIMRDNATGRSRGFGFLTFTKTASVDEV 210
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
++ H +DG+L+ +A PR Q + +I+VG + EV FS+
Sbjct: 211 LKKQHV--LDGKLIDPKRAIPREEQDKTG--------KIFVGGIAAEVTEEDFTDYFSQF 260
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
G +++A+++ D++TGRSRGFGFVT S + D + A L GR++ + AE R ++
Sbjct: 261 GTIIDAQLMIDKDTGRSRGFGFVTYDSPDAV-DRVCANKYVPLKGRSMEIKRAEPRNQQ 318
>gi|119188517|ref|XP_001244865.1| hypothetical protein CIMG_04306 [Coccidioides immitis RS]
gi|392867773|gb|EAS33469.2| nucleic acid-binding protein [Coccidioides immitis RS]
Length = 334
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++VGNL +DV + L F K G VE ++Y+ S+GFG+V VE AEKAV +
Sbjct: 143 IYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYDYR-GVSKGFGYVKFHDVETAEKAVALM 201
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
H +GR L VN A +P P +Y+GN+P+E+ + L ++F + ++
Sbjct: 202 HGQLFEGRHLAVNFARVELDKPMNHDPTKPPTRTLYIGNIPFEMTDRDLNELFKDVDNII 261
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ RV DR TGR+RGF + A L + GR +R++ +
Sbjct: 262 DVRVAVDRRTGRARGFVHADFTDIESARKAFTLLSTKTPYGRPLRIDYSH 311
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P IYVGNL ++V L+ FS+ G V R++YD G S+GFG+V A
Sbjct: 139 PKSTIYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYDYR-GVSKGFGYVKFHDVETAEKA 197
Query: 312 IAALDGQNLDGRAIRVNVA 330
+A + GQ +GR + VN A
Sbjct: 198 VALMHGQLFEGRHLAVNFA 216
>gi|238007140|gb|ACR34605.1| unknown [Zea mays]
gi|413926095|gb|AFW66027.1| hypothetical protein ZEAMMB73_185087 [Zea mays]
Length = 366
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E + FEK G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 37 GKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 96
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H IDGR + V + PR + P+ +I++G LP + L+ FS +G
Sbjct: 97 DDHV--IDGRTVEVKRTVPREEMITKDGPKTR----KIFIGGLPPSLTEDELKDHFSSYG 150
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
VV +++ D TGRSRGFGF+T SE + I+ ++L G+ + + AE ++ S
Sbjct: 151 NVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGS 209
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 135 AGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYN 194
G + G +++ EP KLF+G L Y + L FEK G + V+ +
Sbjct: 2 GGHNDQNGNSNGQHDDDSITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKD 61
Query: 195 RETDRSRGFGFVTM---STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 251
T RSRGFGF+T S V+EA+KA + IDGR++ +A PR Q +P
Sbjct: 62 PRTKRSRGFGFITYSHSSMVDEAQKARP----HKIDGRVVEPKRAVPR--QDIDSPNAGA 115
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
+++VG L + D L F +G +V+ +V D+ETG+ RGF FV + D
Sbjct: 116 TVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPV-DK 174
Query: 312 IAALDGQNLDGRAIRVNVAEDRQ 334
+ L+G+ + V A +Q
Sbjct: 175 VVLQKQHQLNGKMVDVKKALPKQ 197
>gi|195429537|ref|XP_002062815.1| GK19652 [Drosophila willistoni]
gi|194158900|gb|EDW73801.1| GK19652 [Drosophila willistoni]
Length = 638
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 17/196 (8%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E AKLF V N + D EKL FE G + +V+ ++E +S+GFGFV T E
Sbjct: 177 EKAKLFTNVYVKNFTEEFDDEKLKDFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEA 235
Query: 214 AEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLP 262
AE AV+ + D+ +G+ L V +A + + + R FE G +YV NL
Sbjct: 236 AEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLD 295
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+D+ RL + FS +G + +A+V+ D E GRS+GFGFV S E A+ L+G+ +
Sbjct: 296 DSIDDERLRKEFSLYGTITSAKVMTDEE-GRSKGFGFVCFISPNEATCAVTELNGRVVGS 354
Query: 323 RAIRVNVAEDRQRRSS 338
+ + V +A+ ++ R +
Sbjct: 355 KPLYVALAQRKEERKA 370
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L D++ L F AG V V + T RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ +D+ + R +R P + G +++ NL ++DN + FS G
Sbjct: 62 TMN-FDL------IRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRQIDNKAIYDTFSAFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +V D E G S+G+GFV +E N +I ++G L+G+ + V R+ R
Sbjct: 115 NILSCKVALD-EKGNSKGYGFVHFETEEAANTSIEKVNGMLLNGKKVYVGKFIPRKER 171
>gi|212274429|ref|NP_001130902.1| uncharacterized protein LOC100192006 [Zea mays]
gi|194690404|gb|ACF79286.1| unknown [Zea mays]
gi|413934109|gb|AFW68660.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 357
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GFV + E+A+ A
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
++ + + G+ + VNKA+ + + + G +++GNL +VD L FS
Sbjct: 83 IKTLNMIKLYGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G +V N +++ D ETG SRGFGFV+ S + AI A++ Q+L R I V+ A +
Sbjct: 136 GVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 257 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKTLN 87
Query: 317 GQNLDGRAIRVNVAEDRQR 335
L G+ IRVN A ++
Sbjct: 88 MIKLYGKPIRVNKASQDKK 106
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G + +++ + ET SRGFGFV+ + E +++A+
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNNQHLCNRPITVSYAYKKDTKGER 198
>gi|413954077|gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 94/175 (53%), Gaps = 6/175 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E F+K G + + ++ ++ T RGFGFVT S ++ +E
Sbjct: 93 GKVFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLE 152
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H IDGR + V + P+ + P+ +I+VG +P + +L++ FS +GK
Sbjct: 153 DEHV--IDGRTVEVKRTVPKELSSKDGPKTK----KIFVGGIPPSLTEDKLKEHFSSYGK 206
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
VV +++ D TGRSRGFGFVT SE + ++ +L G+ + + AE ++
Sbjct: 207 VVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKK 261
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE+ FS +G +V ++++ DRETGRSRGFGFVT +SE + DAI
Sbjct: 8 YRCFVGGLAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASENSMKDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F G + +++I +RET RSRGFGFVT ++ + A+E
Sbjct: 9 RCFVGGLAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASENSMKDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQNLDGRNITVNEA 84
>gi|294933824|ref|XP_002780863.1| single-stranded G-strand telomeric DNA-binding protein, putative
[Perkinsus marinus ATCC 50983]
gi|239890990|gb|EER12658.1| single-stranded G-strand telomeric DNA-binding protein, putative
[Perkinsus marinus ATCC 50983]
Length = 381
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 98/180 (54%), Gaps = 17/180 (9%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+LFVG +P + F + G VE + V+ ++ T R RGFGFVT +T E E +
Sbjct: 74 QLFVGGIPEGFTDDDFHRYFSQFGNVERSIVMTDKMTGRCRGFGFVTYATTGEVENCLAN 133
Query: 221 FHRYDIDGRLLTVNKA-----APRG-------TQPERAPRVFEPGFRIYVGNLPWEVDNA 268
+ ++G+ + VN++ A +G P R + +++ G LP + D
Sbjct: 134 -GPHQLNGKHVDVNRSQDPKDAHKGGWGSDRSGGPSRRGGGGDDPKKVFCGGLPQDCDTE 192
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN-LDGRAIRV 327
RL Q FS++G +V+ + DR+TGRS+G+GFVT SE +N AA++G N +DGR + V
Sbjct: 193 RLRQHFSQYGNIVDCIAMRDRDTGRSKGYGFVTFDSEDAVN---AAINGDNTIDGRWVEV 249
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 235 KAAPRGTQPE-----RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDR 289
KA +G P R F+ +++VG +P + + FS+ G V + V+ D+
Sbjct: 49 KATEQGNTPSFSSGGHGDRGFDDRRQLFVGGIPEGFTDDDFHRYFSQFGNVERSIVMTDK 108
Query: 290 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
TGR RGFGFVT ++ E+ + +A Q L+G+ + VN ++D
Sbjct: 109 MTGRCRGFGFVTYATTGEVENCLANGPHQ-LNGKHVDVNRSQD 150
>gi|196008415|ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
gi|190583092|gb|EDV23163.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
Length = 622
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 12/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+V N D+ ++ LFE+ G + ++ V+ ++ +SRGFGFV+ T E A+KAVE
Sbjct: 202 LYVKNFRDDISDDEFRDLFEQCGKI-VSCVVMRDDSGKSRGFGFVSYETHEAAQKAVETL 260
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ + D R + V +A + + R +E G +YV NL +D+A+L
Sbjct: 261 NEKEFDLRRMYVARAQKKSERSALLRRQYEQKKQEMMKRFQGVNLYVKNLDDVIDDAKLR 320
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
Q F+ G + +A+V+ D E G SRGFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 321 QEFANFGTITSAKVMSD-EKGISRGFGFVCFSSPEEATKAVTEMNGRIIISKPLYVALAQ 379
Query: 332 DRQRRSS 338
++ R +
Sbjct: 380 RKEDRKA 386
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL D+D++ + F G + ++ + E S+G+ FV T E A +A+E
Sbjct: 109 IFIKNLEKDIDNKAIYDTFSAFGNILSCKIALD-ENGNSKGYAFVHFETQEAANRAIEKV 167
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ + G+ + V R + E+ + +YV N ++ + +F + GK+V
Sbjct: 168 NGMLLSGKKVFVGHFMSRKERMEKIGNLAAKYTNLYVKNFRDDISDDEFRDLFEQCGKIV 227
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
+ V+ D ++G+SRGFGFV+ + A+ L+ + D R + V A+ + RS+
Sbjct: 228 SCVVMRD-DSGKSRGFGFVSYETHEAAQKAVETLNEKEFDLRRMYVARAQKKSERSAL 284
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VG+L DV+ +L F G + V + T RS G+ +V +AE+A++
Sbjct: 21 LYVGDLAPDVNEAQLYEKFNSTGPISSIRVCRDAITRRSLGYAYVNFQQPNDAERALDTL 80
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKV 280
+ +D VN R +R P + G I++ NL ++DN + FS G +
Sbjct: 81 N-FD------PVNGKPCRIMWSQRDPSLRRSGVGNIFIKNLEKDIDNKAIYDTFSAFGNI 133
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
++ ++ D E G S+G+ FV ++ N AI ++G L G+ + V R+ R
Sbjct: 134 LSCKIALD-ENGNSKGYAFVHFETQEAANRAIEKVNGMLLSGKKVFVGHFMSRKER 188
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
+++E ++ + L+V NL +D KL F GT+ A+V+ + E SRGFGFV
Sbjct: 292 KKQEMMKRFQGVNLYVKNLDDVIDDAKLRQEFANFGTITSAKVMSD-EKGISRGFGFVCF 350
Query: 209 STVEEAEKAVEMFHRYDIDGRLL 231
S+ EEA KAV +++GR++
Sbjct: 351 SSPEEATKAVT-----EMNGRII 368
>gi|226492336|ref|NP_001150253.1| ribonucleoprotein [Zea mays]
gi|195637832|gb|ACG38384.1| ribonucleoprotein [Zea mays]
Length = 275
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 6/171 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEV-IYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+L N+P+D ++++ LFE G+V E+ +Y+ +++RG FVTM + EEA A+
Sbjct: 72 RLVAQNIPWDCTADEMRALFESHGSVVGVELSMYS--ANKNRGLAFVTMGSEEEALAALT 129
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--GFRIYVGNLPWEVDNARLEQVFSEH 277
+ ++ R + V+ A PR QP++ V + + ++VGNL W V N L ++F+
Sbjct: 130 HLNSTILNDRKIKVDFARPRKKQPKQPAVVSDATEKYVVFVGNLTWRVRNRHLRELFASA 189
Query: 278 GKVVNARVVYDRETG-RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
VV+A V++ T RS G+ FV+ SS+ AI+A +G+ L GR I V
Sbjct: 190 PGVVSAEVIFHTTTPRRSAGYAFVSFSSKESAGAAISAFNGKILMGRPINV 240
>gi|125597614|gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 7/175 (4%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+FVG + ++ E FEK G + + ++ ++ T RGFGFVT S +K ++
Sbjct: 29 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD 88
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H IDGR + V + PR + P+ +I+VG +P + +L++ FS +GK
Sbjct: 89 EH--TIDGRTVEVKRTVPREEMSSKDGPKTR----KIFVGGIPPSLTEDKLKEHFSSYGK 142
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
VV +++ D TGRSRGFGFVT +E + ++ +L G+ + + AE ++
Sbjct: 143 VVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEIKKAEPKK 197
>gi|212546733|ref|XP_002153520.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
gi|210065040|gb|EEA19135.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
Length = 472
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LF+GNL +++D E L FE G + ++ RET RSRGFG+V + A+ A E
Sbjct: 226 LFIGNLSWNIDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADAASAKAAYEAK 285
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPR-------------VFEPGFRIYVGNLPWEVDNA 268
++DGR + ++ A PR + APR +++GNL + VD
Sbjct: 286 KDTELDGRTINLDYAKPRDANAQ-APREKAQTRARSFGDQTSPESNTLFLGNLVFGVDEN 344
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ +VF G + R+ D ETGR +G+G+V SS E A+ L G ++ GRAIR++
Sbjct: 345 AVREVFESQGTIQGIRLPTDPETGRPKGYGYVEFSSVDEARQALNDLQGTDIGGRAIRLD 404
Query: 329 VAEDR 333
+ R
Sbjct: 405 FSTPR 409
>gi|293336544|ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea mays]
gi|223972773|gb|ACN30574.1| unknown [Zea mays]
gi|413936749|gb|AFW71300.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
gi|413936750|gb|AFW71301.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
Length = 384
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E + FEK G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 55 GKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 114
Query: 220 MFHRYDIDGRLLTVNKAAPRG-TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H IDGR + V + PR + P+ +I++G LP + L+ FS +G
Sbjct: 115 DEHV--IDGRTVEVKRTVPREEMNTKDGPKTR----KIFIGGLPASLTEDELKDHFSLYG 168
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
KV+ +++ D TGRSRGFGFVT SE + I+ ++L G+ + + AE ++ S
Sbjct: 169 KVLEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGS 227
>gi|195381687|ref|XP_002049579.1| GJ21671 [Drosophila virilis]
gi|194144376|gb|EDW60772.1| GJ21671 [Drosophila virilis]
Length = 645
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 17/199 (8%)
Query: 155 EPPEDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
E E AKLF V N + D EKL FE G + +V+ ++E +S+GFGFV T
Sbjct: 174 ELGEKAKLFTNVYVKNFTEEFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAYET 232
Query: 211 VEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVG 259
E AE AV+ + D+ +G+ L V +A + + + R FE G +YV
Sbjct: 233 TEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVK 292
Query: 260 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 319
NL +D+ RL + FS +G + +A+V+ D E GRS+GFGFV S E A+ L+G+
Sbjct: 293 NLDDSIDDERLRKEFSLYGTITSAKVMTDDE-GRSKGFGFVCFISPNEATCAVTELNGRV 351
Query: 320 LDGRAIRVNVAEDRQRRSS 338
+ + + V +A+ ++ R +
Sbjct: 352 VGSKPLYVALAQRKEERKA 370
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L D++ L F AG V V + T RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ +D+ + R +R P + G +++ NL +DN + FS G
Sbjct: 62 TMN-FDL------IRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+++ +V D E G S+G+GFV +E N +I ++G L+G+ + V
Sbjct: 115 NILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
>gi|302754726|ref|XP_002960787.1| hypothetical protein SELMODRAFT_163608 [Selaginella moellendorffii]
gi|300171726|gb|EFJ38326.1| hypothetical protein SELMODRAFT_163608 [Selaginella moellendorffii]
Length = 359
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 22/188 (11%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P KLFV L ++ S+ L F+ G +E VI ++ T +SRGFGF+T ++ A++
Sbjct: 68 PAHRKLFVRGLAWETTSQALRDAFQHYGEIEEGAVITDKATGKSRGFGFITFKHMDSAQR 127
Query: 217 AVEMFHRYDIDGRLLTVNKA-------APRGTQPERAPRVFEPGFRIYVGNLPWEVDNAR 269
A++ + IDGR+ N A A Q +R ++Y+G L +E N
Sbjct: 128 ALKEPSK-TIDGRITVCNLASVGSSAGAGSADQAQR---------KLYIGGLSYETSNET 177
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN--LDGRAIRV 327
L +FS++G++ V YD+ T +SRGF F+T S + A A+D N ++GR + V
Sbjct: 178 LLNIFSQYGEIEEGAVAYDKNTNKSRGFAFITYKS---VEAARKAIDDPNKTIEGRHVIV 234
Query: 328 NVAEDRQR 335
+A + Q+
Sbjct: 235 KLAAEGQK 242
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL++G L Y+ +E L +F + G +E V Y++ T++SRGF F+T +VE A KA++
Sbjct: 163 KLYIGGLSYETSNETLLNIFSQYGEIEEGAVAYDKNTNKSRGFAFITYKSVEAARKAIDD 222
Query: 221 FHRYDIDGRLLTVNKAA---------PRGTQPERAPRVFEPGFRIYVGNLP 262
++ I+GR + V AA Q + P+V + G+ + NLP
Sbjct: 223 PNK-TIEGRHVIVKLAAEGQKEKAVSQSSAQNQGGPQV-QAGYSVINPNLP 271
>gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684102|gb|EDQ70507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GF+ + ++A+ A
Sbjct: 23 QDATAYVGNLDSQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEDDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G ++VGNL +VD L FS
Sbjct: 83 IKILNMIKLYGKPIRVNKAS-------QDKKSLDVGANLFVGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
G +V N +++ D ++G SRGFGF++ S + AI A++GQ L RAI V+ A + +
Sbjct: 136 GVIVTNPKIMRDPDSGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRAITVSYAYKKDTK 195
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LFVGNL DVD + L F G + +++ + ++ SRGFGF++ + E ++ A+
Sbjct: 112 ANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDSGNSRGFGFISYDSFEASDSAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNGQYLCNRAITVSYAYKKDTKGER 198
>gi|302506947|ref|XP_003015430.1| nucleic acid-binding protein [Arthroderma benhamiae CBS 112371]
gi|291179002|gb|EFE34790.1| nucleic acid-binding protein [Arthroderma benhamiae CBS 112371]
Length = 293
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 12/186 (6%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP A ++VGN+ +D+ + L K G V +IY+ SRGFG+V +VEEA
Sbjct: 77 EPQPKATVYVGNILFDITAADLKEYASKYGKVLGTRIIYD-SRGLSRGFGYVRFESVEEA 135
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
+KA++ H + +GR L+VN A R QP+R EP I+VGN+ +V + L
Sbjct: 136 KKAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRK---MEPTRTIFVGNIAHQVTDRDLHA 192
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA---LDGQNLDGRAIRVNV 329
+F + V + RV DR TG RGF T++ AIA L GQ GR +R++
Sbjct: 193 LFDDIPNVFDVRVAVDRRTGMPRGFAHAEF---TDVESAIAGFEMLKGQAPYGRPLRLDY 249
Query: 330 AEDRQR 335
+ +R
Sbjct: 250 SHSARR 255
>gi|168000120|ref|XP_001752764.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695927|gb|EDQ82268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+F+G L +D ++ L F+K G + A ++ +R T RGFGFVT + + +K V
Sbjct: 1 GKIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPDVCDKVV- 59
Query: 220 MFHRYDIDGRLLTVNKAAPR-GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
++ IDGR + K+ PR + P+ +I+VG +P + + + F+ G
Sbjct: 60 -LDKHVIDGRTVEAKKSVPRENLATSKGPKTK----KIFVGGIPPSITDEEFKSYFAGFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
V+ +++ D TGRSRGFGFVT SE + D +A L G+ +
Sbjct: 115 SVMEHQIMQDHSTGRSRGFGFVTFDSEQVVEDILAHGKLHELAGKQV 161
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P+ K+FVG +P + E+ F G+V +++ + T RSRGFGFVT + + E
Sbjct: 87 PKTKKIFVGGIPPSITDEEFKSYFAGFGSVMEHQIMQDHSTGRSRGFGFVTFDSEQVVED 146
Query: 217 AVEMFHRYDIDGR 229
+ +++ G+
Sbjct: 147 ILAHGKLHELAGK 159
>gi|326472099|gb|EGD96108.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 293
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 12/186 (6%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP A ++VGN+ +D+ + L K G V +IY+ SRGFG+V +VEEA
Sbjct: 77 EPQPKATVYVGNILFDITAADLKEYASKYGKVLGTRIIYD-SRGLSRGFGYVRFESVEEA 135
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
+KA++ H + +GR L+VN A R QP+R EP I+VGN+ +V + L
Sbjct: 136 KKAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRK---MEPTRTIFVGNIAHQVTDRDLHA 192
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA---LDGQNLDGRAIRVNV 329
+F + V + RV DR TG RGF T++ AIA L GQ GR +R++
Sbjct: 193 LFDDIPNVFDVRVAVDRRTGMPRGFAHAEF---TDVESAIAGFEMLKGQAPYGRPLRLDY 249
Query: 330 AEDRQR 335
+ +R
Sbjct: 250 SHSARR 255
>gi|400601150|gb|EJP68793.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 22/195 (11%)
Query: 149 EEEEFVEPP----------EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETD 198
EE EF PP +D K+F+G L ++ + L F + G V V+ + T
Sbjct: 95 EEPEFTAPPLGTVHKASAKDDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTG 154
Query: 199 RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYV 258
RSRGFGF+T + + M + +DG+++ +A PR Q + + +I+V
Sbjct: 155 RSRGFGFLTFKDAKTVN--IVMVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFV 204
Query: 259 GNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
G + + + F++ G+V++A ++ D++TGR RGFGFVT SE +++ I+
Sbjct: 205 GGVSQDTTDQEFRDFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGVDNCISIP--L 262
Query: 319 NLDGRAIRVNVAEDR 333
+ G+ I V A+ R
Sbjct: 263 EIHGKPIEVKRAQPR 277
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G L WE + L FS+ G+VV V+ D TGRSRGFGF+T +N I
Sbjct: 117 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVN--IVM 174
Query: 315 LDGQNLDGRAI--RVNVAEDRQRRSS 338
+ LDG+ I + + D Q ++S
Sbjct: 175 VKEHYLDGKIIDPKRAIPRDEQEKTS 200
>gi|392346932|ref|XP_230831.6| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Rattus
norvegicus]
Length = 609
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 103/188 (54%), Gaps = 13/188 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL D+D + L LF + G + +V+ + +SRGFGF+ EEA+KAV+
Sbjct: 193 IYVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRD-SNGQSRGFGFINFEKHEEAQKAVDHM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ ++ G+LL V +A R + R FE G +YV NL +++ RL+
Sbjct: 252 NGKEVSGQLLYVGRAQKRAERQNELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDDRLK 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+VFS +G + +A+V+ E+ S+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 EVFSTYGVITSAKVM--TESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 332 DRQRRSSF 339
++ R +
Sbjct: 370 RKEERKAI 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+ L+VG+L DV L +F GT+ V + T RS G+ ++ +AE+A++
Sbjct: 11 SSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I G+ + R R P + G I++ NL +DN L FS G
Sbjct: 71 TMNFEMIKGQPI-------RIMWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFSTFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++++VVY+ E G SRGFGFV + AI ++G L+ R + V + RQ+R
Sbjct: 124 SILSSKVVYN-EHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKR 179
>gi|302659529|ref|XP_003021453.1| nucleic acid-binding protein [Trichophyton verrucosum HKI 0517]
gi|291185354|gb|EFE40835.1| nucleic acid-binding protein [Trichophyton verrucosum HKI 0517]
Length = 293
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 12/186 (6%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP A ++VGN+ +D+ + L K G V +IY+ SRGFG+V +VEEA
Sbjct: 77 EPQPKATVYVGNILFDITAADLKEYASKYGKVLGTRIIYD-SRGLSRGFGYVRFESVEEA 135
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
+KA++ H + +GR L+VN A R QP+R EP I+VGN+ +V + L
Sbjct: 136 KKAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRK---MEPTRTIFVGNIAHQVTDRDLHA 192
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA---LDGQNLDGRAIRVNV 329
+F + V + RV DR TG RGF T++ AIA L GQ GR +R++
Sbjct: 193 LFDDIPNVFDVRVAVDRRTGMPRGFAHAEF---TDVESAIAGFEMLKGQAPYGRPLRLDY 249
Query: 330 AEDRQR 335
+ +R
Sbjct: 250 SHSARR 255
>gi|303323779|ref|XP_003071881.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111583|gb|EER29736.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320031835|gb|EFW13793.1| nucleic acid-binding protein [Coccidioides posadasii str. Silveira]
Length = 334
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++VGNL +DV + L F K G VE ++Y+ S+GFG+V VE AEKAV +
Sbjct: 143 IYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYDYR-GVSKGFGYVKFHDVETAEKAVALM 201
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
H +GR L VN A +P P +Y+GN+P+E+ + L ++F + ++
Sbjct: 202 HGQLFEGRHLAVNFARVELDKPMNHDPTKPPTRTLYIGNIPFEMTDRDLNELFKDVDNII 261
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ RV DR TGR+RGF + A L + GR +R++ +
Sbjct: 262 DVRVAVDRRTGRARGFVHADFTDIESARKAFTLLSTKTPYGRPLRIDYSH 311
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P IYVGNL ++V L+ FS+ G V R++YD G S+GFG+V A
Sbjct: 139 PKSTIYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYDYR-GVSKGFGYVKFHDVETAEKA 197
Query: 312 IAALDGQNLDGRAIRVNVA 330
+A + GQ +GR + VN A
Sbjct: 198 VALMHGQLFEGRHLAVNFA 216
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P L++GN+P+++ L LF+ + V +R T R+RGF + +E A K
Sbjct: 231 PPTRTLYIGNIPFEMTDRDLNELFKDVDNIIDVRVAVDRRTGRARGFVHADFTDIESARK 290
Query: 217 AVEMFHRYDIDGRLLTVNKAAPR-GTQPERAPRVFEPG 253
A + GR L ++ + QP P+ +PG
Sbjct: 291 AFTLLSTKTPYGRPLRIDYSHSNIKIQPAGPPKRDDPG 328
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E + FEK G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 55 GKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 114
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H IDGR + V + PR + P+ +I++G LP + L+ FS +G
Sbjct: 115 DDHV--IDGRTVEVKRTVPREEMITKDGPKTR----KIFIGGLPPSLTEDELKDHFSSYG 168
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
VV +++ D TGRSRGFGFVT SE + I+ ++L G+ + + AE ++ S
Sbjct: 169 NVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGS 227
>gi|357460829|ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355489744|gb|AES70947.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 379
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL + E L LF +AG V V +R T++ +G+GFV + E+A+ A
Sbjct: 23 QDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G +++GNL +VD L FS
Sbjct: 83 IKVLNMIKLYGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
G +V N +++ D +TG SRGFGF++ S + AI A++GQ L R I V+ A + +
Sbjct: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKDTK 195
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G + +++ + +T SRGFGF++ + E ++ A+
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|195150897|ref|XP_002016387.1| GL11548 [Drosophila persimilis]
gi|194110234|gb|EDW32277.1| GL11548 [Drosophila persimilis]
Length = 640
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 17/196 (8%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E AKLF V N D D EKL FE G + +V+ ++E +S+GFGFV T E
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAYETTEA 235
Query: 214 AEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLP 262
AE AV+ + D+ + + L V +A + + + R FE G +YV NL
Sbjct: 236 AEAAVQALNGKDMGESKSLYVARAQKKAERQQELKRKFEELKKKRHDSVFGVNLYVKNLD 295
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+D+ RL + FS +G + +A+V+ D E GRS+GFGFV S E A+ L+G+ +
Sbjct: 296 DTIDDERLRKDFSMYGTITSAKVMTDEE-GRSKGFGFVCFISPNEATCAVTELNGRVIGS 354
Query: 323 RAIRVNVAEDRQRRSS 338
+ + V +A+ ++ R +
Sbjct: 355 KPLYVALAQRKEERKA 370
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L D++ L F AG V V + T RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ +D+ + R +R P + G +++ NL +DN + FS G
Sbjct: 62 TMN-FDL------IRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKGIDNKAIYDTFSAFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +V D E G S+G+GFV +E N +I ++G L+G+ + V R+ R
Sbjct: 115 NILSCKVAID-EKGNSKGYGFVHFETEEAANTSIDRVNGMLLNGKKVYVGKFIPRKER 171
>gi|125808454|ref|XP_001360757.1| GA18673 [Drosophila pseudoobscura pseudoobscura]
gi|54635929|gb|EAL25332.1| GA18673 [Drosophila pseudoobscura pseudoobscura]
Length = 640
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 17/196 (8%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E AKLF V N D D EKL FE G + +V+ ++E +S+GFGFV T E
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAYETTEA 235
Query: 214 AEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLP 262
AE AV+ + D+ + + L V +A + + + R FE G +YV NL
Sbjct: 236 AEAAVQALNGKDMGESKSLYVARAQKKAERQQELKRKFEELKKKRHDSVFGVNLYVKNLD 295
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+D+ RL + FS +G + +A+V+ D E GRS+GFGFV S E A+ L+G+ +
Sbjct: 296 DTIDDERLRKDFSMYGTITSAKVMTDEE-GRSKGFGFVCFISPNEATCAVTELNGRVIGS 354
Query: 323 RAIRVNVAEDRQRRSS 338
+ + V +A+ ++ R +
Sbjct: 355 KPLYVALAQRKEERKA 370
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L D++ L F AG V V + T RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ +D+ + R +R P + G +++ NL +DN + FS G
Sbjct: 62 TMN-FDL------IRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKGIDNKAIYDTFSAFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +V D E G S+G+GFV +E N +I ++G L+G+ + V R+ R
Sbjct: 115 NILSCKVAID-EKGNSKGYGFVHFETEEAANMSIDRVNGMLLNGKKVYVGKFIPRKER 171
>gi|47214179|emb|CAF96980.1| unnamed protein product [Tetraodon nigroviridis]
Length = 487
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLFVG L D D + L FE+ GT+ V+ N++ RSR FGFVT ST EEA+ A+
Sbjct: 5 CKLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQVQRSRCFGFVTYSTPEEADSAMA 64
Query: 220 MFHRYDIDGRLLTVNKAAPR--GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+ +DG + V +A R +PE +V +I+VG L + + L + FS+
Sbjct: 65 A-RPHTVDGNPVEVKRAVAREDAGKPEALAKV----KKIFVGGLKDDTEENHLTEHFSQF 119
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G++ A V+ D+ETG+ RGFGFV + + ++ + ++G + V A +Q
Sbjct: 120 GEIEKAEVISDKETGKKRGFGFVYFVDQDSADKSV-VIKFHTINGHKVEVKKALTKQ 175
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 181 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG 240
+K G + V+ N+E RSR FGF+T ST EEA+ A+ + +DG + + +A R
Sbjct: 279 QKYGQLSDCVVVKNKELGRSRCFGFITYSTPEEADSAMAA-SPHVVDGHNVELKRAVAR- 336
Query: 241 TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 300
Q P V +I+VG + V+ L FS+ G V A ++ D+ TG+ RGFGFV
Sbjct: 337 -QDADNPEVLANVKKIFVGGVQDHVEAEHLTDYFSQFGAVEKAEIISDKLTGKKRGFGFV 395
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+FVG + V++E L F + G VE AE+I ++ T + RGFGFV + A KAV +
Sbjct: 350 KIFVGGVQDHVEAEHLTDYFSQFGAVEKAEIISDKLTGKKRGFGFVFFVDTDSATKAV-L 408
Query: 221 FHRYDIDGRLLTVNKAAPR 239
+ I G + KA +
Sbjct: 409 TRYHTISGNKVEAKKAMTK 427
>gi|388515725|gb|AFK45924.1| unknown [Lotus japonicus]
Length = 290
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 104/212 (49%), Gaps = 22/212 (10%)
Query: 136 GERQEESGEEGVFE-EEEFVEPPE-----DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIA 189
GE+ + + VF+ EEE +PP+ +++V NLP ++ L LF+ GT+
Sbjct: 72 GEKSLNTQNDDVFKNEEEEQQPPQRRPRGPCEIYVCNLPRSCNAAHLLDLFKPYGTIISV 131
Query: 190 EVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--------------K 235
EV N ET SRG G+V M ++ A+ A+ D+ GR L V
Sbjct: 132 EVSRNAETGESRGCGYVIMESINSAKSAIAALDGSDVGGRELRVKFSVEMSLERTDANAN 191
Query: 236 AAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 295
A P+R +E ++YVGNL V +L F G V++ RV++DR+ G++R
Sbjct: 192 AGEMYASPKRT-FYYEAPHKLYVGNLARVVKPEQLRNHFIRFGNVLSVRVLHDRKQGKAR 250
Query: 296 GFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+ F++ SE E DA +L+G GR I V
Sbjct: 251 VYAFLSFESEAE-RDAAMSLNGTEFYGRTIVV 281
>gi|73992493|ref|XP_534430.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Canis lupus
familiaris]
Length = 611
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NL DVD + L LF + G + +V+ + ++ SRGFGFV EEA+KA
Sbjct: 189 EFTNIYVKNLHVDVDEQGLQDLFSRFGKMLSVKVMRD-DSGHSRGFGFVNFQKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL V +A R + R FE G +YV NL +D+
Sbjct: 248 VMDMNGKEVSGRLLYVGRAQKRVERQSELKRRFEQLKQDRLTRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ L + + V
Sbjct: 308 EKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRILGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEVIKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D SRGFGFV + AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVVCDDHG--SRGFGFVHFETHEAAQQAITTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 252 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
PGF +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGFPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 309 NDAIAALDGQNLDGRAIRV 327
A+ ++ + + G+ IR+
Sbjct: 66 ERALDTMNFEVIKGQPIRI 84
>gi|224076982|ref|XP_002305079.1| predicted protein [Populus trichocarpa]
gi|222848043|gb|EEE85590.1| predicted protein [Populus trichocarpa]
Length = 384
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 97/175 (55%), Gaps = 8/175 (4%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLF+ L + S+ L +LF G +E A VI+++ T +S+GFGF+T V+ A ++
Sbjct: 76 KLFIRGLSSETTSDTLRILFSSFGELEEAIVIHDKNTGKSKGFGFITFKHVDSAMLSIRE 135
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ IDGR+ A+ + + + R ++YVGN+P+E+ + RL FS +G++
Sbjct: 136 PSK-KIDGRITVTQLASNNSSTGDVSLR------KVYVGNVPFEITSERLLGFFSMYGEI 188
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
+ +D+ TG+S+GF F+ SE AIA +N+DG + +A D +R
Sbjct: 189 EEGPLGFDKSTGKSKGFAFLIYKSEDGAKAAIAD-PMKNIDGHQVVCKLAVDNKR 242
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G L + D+ L + F ++G+V+ ARV+ DRETGRSRGFGFVT +S E + AI A
Sbjct: 41 KLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQA 100
Query: 315 LDGQNLDGRAIRVNVAEDRQR 335
LDGQ+L GR +RVN A DR R
Sbjct: 101 LDGQDLHGRRVRVNYATDRAR 121
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 48/86 (55%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
+ +KLF+G L Y D L F K G V A VI +RET RSRGFGFVT ++ EE
Sbjct: 34 IRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEE 93
Query: 214 AEKAVEMFHRYDIDGRLLTVNKAAPR 239
A A++ D+ GR + VN A R
Sbjct: 94 ASSAIQALDGQDLHGRRVRVNYATDR 119
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E + F K G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 62 GKIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 121
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H +IDGR + V + PR + P+ +I+VG LP + L FS +G
Sbjct: 122 DEH--NIDGRTVEVKRTVPREEMSSKDGPKTR----KIFVGGLPSTLTEDDLRDHFSSYG 175
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
VV +++ D TGRSRGFGFVT SE + I+ ++L G+ + + AE ++
Sbjct: 176 NVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKH 232
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+I+VG + WE + F ++G + ++ ++ D+ T RGFGFVT S + ++ +
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE- 121
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSS 338
D N+DGR + V R+ SS
Sbjct: 122 -DEHNIDGRTVEVKRTVPREEMSS 144
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E + F K G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 62 GKIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 121
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H +IDGR + V + PR + P+ +I+VG LP + L FS +G
Sbjct: 122 DEH--NIDGRTVEVKRTVPREEMSSKDGPKTR----KIFVGGLPSTLTEDDLRDHFSSYG 175
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
VV +++ D TGRSRGFGFVT SE + I+ ++L G+ + + AE ++
Sbjct: 176 NVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKH 232
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+I+VG + WE + F ++G + ++ ++ D+ T RGFGFVT S + ++ +
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE- 121
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSS 338
D N+DGR + V R+ SS
Sbjct: 122 -DEHNIDGRTVEVKRTVPREEMSS 144
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG L W D L++ FS+HG+V+ ARV+ DR+TGRSRGFGFV+ +S E A+ A
Sbjct: 41 KLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTA 100
Query: 315 LDGQNLDGRAIRVNVAEDRQR 335
LDGQ+L GR IRVN A ++ R
Sbjct: 101 LDGQDLHGRQIRVNYATEKLR 121
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
+ +KLFVG L + D L F + G V A VI +R+T RSRGFGFV+ ++ EE
Sbjct: 34 IRSMSSSKLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEE 93
Query: 214 AEKAVEMFHRYDIDGRLLTVNKAAPR 239
A A+ D+ GR + VN A +
Sbjct: 94 AASALTALDGQDLHGRQIRVNYATEK 119
>gi|225430808|ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
Length = 373
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 99/180 (55%), Gaps = 8/180 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GFV + E+A+ A
Sbjct: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G ++VGNL +VD L FS
Sbjct: 83 IKVLNMIKLYGKPIRVNKAS-------QDKKSLDVGANLFVGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
G +V N +++ D +TG SRGFGFV+ S + AI A++GQ L R I V+ A + +
Sbjct: 136 GVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LFVGNL DVD + L F G + +++ + +T SRGFGFV+ + E ++ A+
Sbjct: 112 ANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|125555768|gb|EAZ01374.1| hypothetical protein OsI_23407 [Oryza sativa Indica Group]
Length = 407
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 7/175 (4%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+FVG + ++ E FEK G + + ++ ++ T RGFGFVT S +K ++
Sbjct: 92 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD 151
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H IDGR + V + PR + P+ +I+VG +P + +L++ FS +GK
Sbjct: 152 EH--TIDGRTVEVKRTVPREEMSSKDGPKTR----KIFVGGIPPSLTEDKLKEHFSSYGK 205
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
VV +++ D TGRSRGFGFVT +E + ++ +L G+ + + AE ++
Sbjct: 206 VVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEIKKAEPKK 260
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE+ FS++G++V +++ DRETGRSRGFGFVT +SE + DAI
Sbjct: 44 YRCFVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIE 103
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQNLDGR I VN A+
Sbjct: 104 GMNGQNLDGRNITVNEAQ 121
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D + L F + G + ++I +RET RSRGFGFVT ++ + + A+E
Sbjct: 45 RCFVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIEG 104
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 105 MNGQNLDGRNITVNEA 120
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 99/180 (55%), Gaps = 8/180 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GFV + E+A+ A
Sbjct: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G ++VGNL +VD L FS
Sbjct: 83 IKVLNMIKLYGKPIRVNKAS-------QDKKSLDVGANLFVGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
G +V N +++ D +TG SRGFGFV+ S + AI A++GQ L R I V+ A + +
Sbjct: 136 GVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LFVGNL DVD + L F G + +++ + +T SRGFGFV+ + E ++ A+
Sbjct: 112 ANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|194696360|gb|ACF82264.1| unknown [Zea mays]
gi|414869196|tpg|DAA47753.1| TPA: ribonucleoprotein [Zea mays]
Length = 275
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 6/171 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEV-IYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+L N+P+D ++++ LFE G+V E+ +Y+ +++RG FVTM + EEA A+
Sbjct: 72 RLVAQNIPWDCTADEMRALFESHGSVVGVELSMYS--ANKNRGLAFVTMGSEEEALAALT 129
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--GFRIYVGNLPWEVDNARLEQVFSEH 277
+ ++ R + V+ A PR QP++ V + + ++VGNL W V N L ++F+
Sbjct: 130 HLNSTILNDRKIKVDFARPRKKQPKQPAVVSDDTEKYVVFVGNLTWRVRNRHLRELFASA 189
Query: 278 GKVVNARVVYDRETG-RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
VV+A V++ T RS G+ FV+ SS+ AI+A +G+ L GR I V
Sbjct: 190 PGVVSAEVIFHTTTPRRSAGYAFVSFSSKESAGAAISAFNGKILMGRPINV 240
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 11/189 (5%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E E +FVG L ++VD E L FE+ GTV A VI + ++ RS+GFG+V + E A
Sbjct: 201 ESGESCTVFVGRLSWNVDDEWLGKEFEEYGTVVNARVIMDGQSGRSKGFGYVDFDSPEAA 260
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPR------GTQPERAPRVFE----PGFRIYVGNLPWE 264
+ AV + + +IDGR++ ++ + PR G +RA + P +++GNL +
Sbjct: 261 KAAVAVNGQKEIDGRMVNLDISTPRPAQNNNGFAQQRASNFGDKQSPPSDTVFIGNLSFN 320
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
+ FS G++ + R+ D +GR +GFG+VT S + ++G + GR
Sbjct: 321 ATEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTFDSIDAAKQCV-EMNGHFIAGRP 379
Query: 325 IRVNVAEDR 333
R++ + R
Sbjct: 380 CRLDFSTPR 388
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G L + D+ L + F ++G+V+ ARV+ DRETGRSRGFGFVT +S E + AI A
Sbjct: 41 KLFIGGLSYSTDDTSLREAFYKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQA 100
Query: 315 LDGQNLDGRAIRVNVAEDRQR 335
LDGQ+L GR +RVN A DR R
Sbjct: 101 LDGQDLHGRRVRVNYATDRAR 121
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 48/86 (55%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
+ +KLF+G L Y D L F K G V A VI +RET RSRGFGFVT ++ EE
Sbjct: 34 IRCMSSSKLFIGGLSYSTDDTSLREAFYKYGEVIEARVIVDRETGRSRGFGFVTFTSSEE 93
Query: 214 AEKAVEMFHRYDIDGRLLTVNKAAPR 239
A A++ D+ GR + VN A R
Sbjct: 94 ASSAIQALDGQDLHGRRVRVNYATDR 119
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 93/180 (51%), Gaps = 13/180 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L F + G V V+ N ET RSRGFGFVT + + ++A
Sbjct: 16 EKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVDRA 75
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGT-QPERA---PRVFEPGFRIYVGNLPWEVDNARLEQV 273
+E + +DGR + PR +P+R P+VF +G LP + L
Sbjct: 76 LEN-GPHTLDGRTIDPKPCNPRSLHKPKRTGGYPKVF-------LGGLPPNITETDLRSF 127
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FS +G V+ ++YD+E +SRGFGF++ +E + A A N+ G+ + + AE R
Sbjct: 128 FSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEPAVERATAEHF-VNISGKQVEIKKAEPR 186
>gi|347966814|ref|XP_321133.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|347966816|ref|XP_003435970.1| AGAP001930-PB [Anopheles gambiae str. PEST]
gi|333469887|gb|EAA00972.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|333469888|gb|EGK97443.1| AGAP001930-PB [Anopheles gambiae str. PEST]
Length = 412
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 13/180 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L F + G V V+ N ET RSRGFGFVT + E E+A
Sbjct: 16 EKGKLFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERA 75
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGT-QPERA---PRVFEPGFRIYVGNLPWEVDNARLEQV 273
+E + +DGR + PR +P+R P+VF +G LP + L
Sbjct: 76 LEN-GPHTLDGRTIDPKPCNPRSQHKPKRTGGYPKVF-------LGGLPPNITETDLRSF 127
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F +G V+ ++YD+E +SRGFGF++ +E+ + A ++ G+ + V AE R
Sbjct: 128 FCRYGTVMEVVIMYDQEKKKSRGFGFLSFENESAVERATTDHF-VHISGKQVEVKKAEPR 186
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 60/81 (74%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG + + D+ L + F+++G+V+ ARV+ DRETGRSRGFGFVT +S E + AI A
Sbjct: 44 KVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 103
Query: 315 LDGQNLDGRAIRVNVAEDRQR 335
LDGQ+L GR +RVN A DR R
Sbjct: 104 LDGQDLHGRRVRVNYANDRAR 124
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
+ E +K+FVG + + D + L F K G V A VI +RET RSRGFGFVT ++ EE
Sbjct: 37 MSSMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEE 96
Query: 214 AEKAVEMFHRYDIDGRLLTVNKAAPR 239
A A++ D+ GR + VN A R
Sbjct: 97 ASSAIQALDGQDLHGRRVRVNYANDR 122
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 60/81 (74%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG + + D+ L + F+++G+V+ ARV+ DRETGRSRGFGFVT +S E + AI A
Sbjct: 44 KVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 103
Query: 315 LDGQNLDGRAIRVNVAEDRQR 335
LDGQ+L GR +RVN A DR R
Sbjct: 104 LDGQDLHGRRVRVNYANDRAR 124
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVE 212
++ E +K+FVG + + D + L F K G V A VI +RET RSRGFGFVT ++ E
Sbjct: 36 WMSSMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSE 95
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKAAPR 239
EA A++ D+ GR + VN A R
Sbjct: 96 EASSAIQALDGQDLHGRRVRVNYANDR 122
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE+ FS+ G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D + L F + G + +++I +RET RSRGFGFVT S+ + A+E
Sbjct: 9 RCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQNLDGRNITVNEA 84
>gi|224114692|ref|XP_002316830.1| predicted protein [Populus trichocarpa]
gi|222859895|gb|EEE97442.1| predicted protein [Populus trichocarpa]
Length = 369
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 97/175 (55%), Gaps = 8/175 (4%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLF+ L + SE L +LF +G +E A VI+++ T +S+GFGF+T V+ A ++
Sbjct: 76 KLFIRGLSSETTSETLRILFSSSGELEEAIVIHDKNTGKSKGFGFITFKHVDAAMLSIRE 135
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ IDGR+ A+ + + + R ++YVGN+P+EV + RL FS +G++
Sbjct: 136 PSK-KIDGRITVTQLASNNSSTTDVSLR------KVYVGNVPFEVSSERLLGFFSMYGEI 188
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
+ +D+ TG+S+GF F+ +E AIA +N+DG + A D ++
Sbjct: 189 EEGPLGFDKSTGKSKGFAFLIYKNEEGAKAAIAD-PMKNIDGHQVVCKFAADNRK 242
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 135 AGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYN 194
G + G +++ EP KLF+G L Y + L FEK G + V+ +
Sbjct: 2 GGHNDQNGNSNGQHDDDSISEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKD 61
Query: 195 RETDRSRGFGFVTM---STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 251
T RSRGFGF+T S V+EA+KA + IDGR++ +A PR Q +P
Sbjct: 62 PRTKRSRGFGFITYSHSSMVDEAQKARP----HKIDGRVVEPKRAVPR--QDIDSPNAGA 115
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
+++VG L + D L F +G +V+ +V D+ETG+ RGF FV + D
Sbjct: 116 TVKKLFVGALKDDHDEQSLRDYFQHYGNIVDINIVMDKETGKKRGFAFVEFDDYDPV-DK 174
Query: 312 IAALDGQNLDGRAIRVNVAEDRQ 334
+ L+G+ + V A +Q
Sbjct: 175 VVLQKQHQLNGKMVDVKKALPKQ 197
>gi|298710527|emb|CBJ25591.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 502
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 6/182 (3%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
+ KLF+G + + E L F K GT+ ++ ++ T RGFGF+ + ++ +
Sbjct: 147 EGKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEIL 206
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG--FRIYVGNLPWEVDNARLEQVFSE 276
H+ IDG+++ V +A P+ P + R P +I+VG L V A + F
Sbjct: 207 SQEHK--IDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFET 264
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
G VV+A V++DR+T RSRGFGFVT + ++D + + ++G+ + V AE ++ R
Sbjct: 265 FGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHDIM--MGTHEINGKMVEVKRAEPKENR 322
Query: 337 SS 338
S
Sbjct: 323 SG 324
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P E K+FVG L V + FE G V A V+++R+T RSRGFGFVT E+A
Sbjct: 238 PAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQ--EDAV 295
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 248
M ++I+G+++ V +A P+ + RAPR
Sbjct: 296 VHDIMMGTHEINGKMVEVKRAEPKENRSGRAPR 328
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE+ FS+ G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D + L F + G + +++I +RET RSRGFGFVT S+ + A+E
Sbjct: 9 RCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQNLDGRNITVNEA 84
>gi|328852276|gb|EGG01423.1| hypothetical protein MELLADRAFT_39080 [Melampsora larici-populina
98AG31]
Length = 701
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L++ NLP +V +E+L +F K G V A V + E+ + RGFGFV E A KAVE
Sbjct: 240 LYIKNLPTEVTTEELNEMFSKYGPVTSAAVQAD-ESGKHRGFGFVNYENHESASKAVEAL 298
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
H D G +L V +A R + R E G +Y+ NL E D+ +L+
Sbjct: 299 HDKDYKGNILYVARAQKRVERDAELRRAHEQQKYETTLKYQGVNLYIKNLDDEYDDEKLQ 358
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F G + + +V+ D + G SRGFGFV S+ E A+A ++G+ L + + V++A+
Sbjct: 359 AEFLPFGTITSCKVMKD-DKGVSRGFGFVCFSAPDEATKAVAEMNGKMLGSKPLYVSLAQ 417
Query: 332 DRQRR 336
+ R
Sbjct: 418 RKDVR 422
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 2/177 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G + +V + T S+G+GFV T E AE A++
Sbjct: 147 IFIKNLDETIDNKALHDTFAAFGDILSCKVAMD-STGASKGYGFVHYVTAESAEAAIKGV 205
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ ++ +++ V PR + + V +Y+ NLP EV L ++FS++G V
Sbjct: 206 NGMQLNDKVVFVGIHVPRRERQAKIDEVRAHFTNLYIKNLPTEVTTEELNEMFSKYGPVT 265
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
+A V D E+G+ RGFGFV + + A+ AL ++ G + V A+ R R +
Sbjct: 266 SAAVQAD-ESGKHRGFGFVNYENHESASKAVEALHDKDYKGNILYVARAQKRVERDA 321
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
+P +YVG L V A L ++FS G V + RV D T RS G+ +V + +
Sbjct: 54 QPNTSLYVGELDPTVTEAMLYEIFSMIGPVSSIRVCRDAVTRRSLGYAYVNYLNAADAER 113
Query: 311 AIAALDGQNLDGRAIRV 327
A+ L+ + +A R+
Sbjct: 114 ALEQLNYSLIKNKACRI 130
>gi|224094731|ref|XP_002310211.1| predicted protein [Populus trichocarpa]
gi|222853114|gb|EEE90661.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 99/180 (55%), Gaps = 8/180 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GFV + E+A+ A
Sbjct: 4 QDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 63
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G +++GNL +VD L FS
Sbjct: 64 IKVLNMIKLYGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPDVDEKLLHDTFSAF 116
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
G +V N +++ D ETG SRGFGF++ S + AI A++GQ L R I V+ A + +
Sbjct: 117 GVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 176
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G + +++ + ET SRGFGF++ + E ++ A+
Sbjct: 93 ANLFIGNLDPDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAI 152
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 153 EAMNGQYLCNRQITVSYAYKKDTKGER 179
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NL DVD ++L LF + G + +V+ + ++ SRGFGFV EEA+KA
Sbjct: 189 EFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRD-DSGHSRGFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL V +A R + R FE G +YV NL +D+
Sbjct: 248 VVNMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 EKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEVIKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G SRGFGFV + +AI+ ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVVCD-EHG-SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 252 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 309 NDAIAALDGQNLDGRAIRV 327
A+ ++ + + G+ IR+
Sbjct: 66 ERALDTMNFEVIKGQPIRI 84
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E + FEK G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 55 GKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 114
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H IDGR + V + PR + P+ +I++G LP + L+ FS +G
Sbjct: 115 DDHV--IDGRTVEVKRTVPREEMITKDGPKTR----KIFIGGLPPSLTEDELKDHFSSYG 168
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
VV +++ D TGRSRGFGF+T SE + I+ ++L G+ + + AE ++ S
Sbjct: 169 NVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGS 227
>gi|426242065|ref|XP_004014898.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 611
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NL DVD ++L LF + G + +V+ + ++ SRGFGFV EEA+KA
Sbjct: 189 EFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRD-DSGHSRGFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL V +A R + R FE G +YV NL +D+
Sbjct: 248 VVNMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 EKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+LP DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLPPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEVIKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G SRGFGFV + +AI+ ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVVCD-EHG-SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 252 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
PG+ +YVG+LP +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLPPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 309 NDAIAALDGQNLDGRAIRV 327
A+ ++ + + G+ IR+
Sbjct: 66 ERALDTMNFEVIKGQPIRI 84
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
FR +VG L W D+ LE+ FS+ G++V ++V+ DRETGRSRGFGFVT ++E + DAI
Sbjct: 8 FRCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D + L F + G + ++VI +RET RSRGFGFVT +T + A+E
Sbjct: 9 RCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQNLDGRNITVNEA 84
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 5/183 (2%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRG--FGFVTMSTVEEA 214
P L+VG L + + L +FE AG V ++I ++ +S+G +GFV A
Sbjct: 84 PNKRALYVGGLDPRITEDVLRQIFETAGHVVSVKIIPDKNKFQSKGLNYGFVEYDDPGTA 143
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
E+A++ + + + VN A QP+ F I+VG+L EV++ L Q F
Sbjct: 144 ERAMQTLNGRRVHQSEIRVNWAYQSNNQPKEDTSNH---FHIFVGDLSNEVNDEVLLQAF 200
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
S G+V ARV++D +TGRSRG+GFV + A++++DG+ L RAIR N A +
Sbjct: 201 SAFGQVSEARVMWDMKTGRSRGYGFVAFRDRGDAEKALSSMDGEWLGSRAIRCNWANQKG 260
Query: 335 RRS 337
+ S
Sbjct: 261 QPS 263
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 42/221 (19%)
Query: 155 EPPEDA----KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
+P ED +FVG+L +V+ E L F G V A V+++ +T RSRG+GFV
Sbjct: 171 QPKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGQVSEARVMWDMKTGRSRGYGFVAFRD 230
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ------------------------PERA 246
+AEKA+ + R + N A +G P
Sbjct: 231 RGDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPYGHHHFPTHG 290
Query: 247 PRVFE------PGFR--IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 298
+ +E P ++ YVGNL + L +F G VV R DR GF
Sbjct: 291 VQSYEMVVNQTPQWQTTCYVGNLTPYTTQSDLVPLFQNFGYVVETRFQSDR------GFA 344
Query: 299 FVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
F+ M + AI L+G N++GR ++ + +DR F
Sbjct: 345 FIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTGQF 385
>gi|410956870|ref|XP_003985059.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Felis catus]
Length = 486
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 104/188 (55%), Gaps = 13/188 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D E+L +F K G +V+ + + +S+GFGFV+ + E A+KAVE
Sbjct: 291 VYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEM 349
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ DI+G+LL V +A + + +VFE G ++Y+ NL +D+ +L
Sbjct: 350 NGKDINGQLLFVGRAQKKSERQAELKQVFEQLKQERFRRCQGMKLYIKNLDDTIDDEKLW 409
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +RV RE GRS+GFG + SS E A+A ++G+ L + + + +A+
Sbjct: 410 REFSSFGSI--SRVKIMREEGRSKGFGLICFSSPEEATKAMAEMNGRILGSKPLYIALAQ 467
Query: 332 DRQRRSSF 339
R+++
Sbjct: 468 KPXERNAY 475
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L DV + L F G V + + T RS G+ +V + +A++A++
Sbjct: 109 ASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQRALD 168
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I G+ + R +R + + G +++ NL +DN L + FS G
Sbjct: 169 TMNFDTIKGKPI-------RLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFG 221
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
K+++++V+ D + SRG+ FV ++ + AI ++G L + V ++R+ R
Sbjct: 222 KILSSKVMSDDQG--SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDR 277
>gi|359482522|ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
Length = 501
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 105/216 (48%), Gaps = 15/216 (6%)
Query: 127 EGEDTVVEAGERQEESGEEGVFEEEE-------FVEPPEDA-KLFVGNLPYDVDSEKLAM 178
+GED E E++E+ G G ++ E E ED KLFVG + ++ E
Sbjct: 160 DGEDD--EVSEKKEKKGTRGKRKQAEGNDDDDWMGESDEDKEKLFVGGISWETSEEIFTN 217
Query: 179 LFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 238
F G + + ++ +R T R RGFGF+T + A+K +E H IDGR + V K P
Sbjct: 218 YFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEEDHV--IDGRAVEVKKTVP 275
Query: 239 RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 298
R R +I+VG +P + L+ FS +G +V +++ D TGRSRGFG
Sbjct: 276 REGMEVRGVSKTR---KIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFG 332
Query: 299 FVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
FVT SE + + L G+ + + AE ++
Sbjct: 333 FVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEPKR 368
>gi|224128049|ref|XP_002320231.1| predicted protein [Populus trichocarpa]
gi|222861004|gb|EEE98546.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 92/177 (51%), Gaps = 10/177 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+L+V NLP D L +F+ G+V EV N ET SRG G++TM +VE A AV
Sbjct: 101 CELYVCNLPRSSDIADLVEMFKPFGSVLSVEVSRNPETGVSRGCGYITMGSVESARNAVS 160
Query: 220 MFHRYDIDGRLLTVNKAAPRGT---QPE---RAPR---VFEPGFRIYVGNLPWEVDNARL 270
D+ GR + V + + PE AP +E ++YVGNLPW L
Sbjct: 161 ALDGSDVGGREMRVRYSVEISSGRRNPEALNSAPTKHLFYESPHKLYVGNLPWSTKPDEL 220
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+F+ G VV+ARV+ DR+ G++R + F++ S+ E DA +++G R + V
Sbjct: 221 RNLFNHFGIVVSARVLSDRKGGKNRTYAFLSFLSDAE-RDAALSMNGTEFYDRMLVV 276
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
FR +VG L W D+ LE FS++G VV+++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 FRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F + G V +++I +RET RSRGFGFVT + + A+E
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ D+DGR +TVN+A
Sbjct: 69 MNGQDLDGRSITVNEA 84
>gi|449459840|ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
gi|449498825|ref|XP_004160645.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
Length = 379
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 99/180 (55%), Gaps = 8/180 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA +VGNL V E L LF +AG V V +R T+ +G+GF+ + E+A+ A
Sbjct: 23 QDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G +++GNL +VD L FS
Sbjct: 83 IKVLNMIKLYGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
G +V N +++ D +TG SRGFGF++ S + AI A++GQ L R I V+ A + +
Sbjct: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G + +++ + +T SRGFGF++ + E ++ A+
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 172 EAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFV NLP D++ L FE+ G V +VI + T S+ GF++ ++AE AVE+
Sbjct: 184 LFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEIM 243
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARLE 271
H +I+G+ L +A + + +E G +YV NL +D+ L
Sbjct: 244 HEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEGLR 303
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ F + G + +A+V+ D GRS+GFGFV SS E A+ ++G+ G+ + V +A+
Sbjct: 304 EAFKQFGNITSAKVITDL-NGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQ 362
Query: 332 DRQRRSS 338
++ R +
Sbjct: 363 RKEDRKA 369
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L D+ L F+ +G V V + T RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHG 278
+ I G+ + + +R P + G +++ NL +DN L FS G
Sbjct: 62 TMNFDVIKGKPIRI-------MWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSSFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI---RVNVAEDRQR 335
+++ +VV D S+GFGFV S+ AI ++G ++ + + R DR R
Sbjct: 115 NILSCKVVCD--INGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMR 172
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 114 DETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFE------EEEFVEPPEDAKLFVGNL 167
D+ E + E E E + G Q+++ + ++E ++ + L+V NL
Sbjct: 234 DQAEAAVEIMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNL 293
Query: 168 PYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDID 227
+D E L F++ G + A+VI + RS+GFGFV S+ EEA KAV +
Sbjct: 294 DDSIDDEGLREAFKQFGNITSAKVITDL-NGRSKGFGFVCFSSPEEATKAVTEMNGRIFG 352
Query: 228 GRLLTVNKA 236
G+ L V A
Sbjct: 353 GKPLYVGLA 361
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
FR +VG L W DN LE+ FS G+++ ++++ DRETGRSRGFGFVT S+E + DAI
Sbjct: 8 FRCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKAMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D++ L F G + +++I +RET RSRGFGFVT S + A+E
Sbjct: 9 RCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKAMRDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQNLDGRNITVNEA 84
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 59/79 (74%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG L + D+ RL + F+++G+VV ARV+ DR+TGRSRGFGFVT + + + AI A
Sbjct: 41 KVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQA 100
Query: 315 LDGQNLDGRAIRVNVAEDR 333
LDGQ+LDGR IR + A DR
Sbjct: 101 LDGQDLDGRRIRCSYATDR 119
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFV 206
VF+ F+ +K+FVG L Y D ++L F K G V A VI +R+T RSRGFGFV
Sbjct: 30 VFQTLRFMSS---SKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFV 86
Query: 207 TMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 241
T E+A A++ D+DGR + + A R +
Sbjct: 87 TFGASEDASSAIQALDGQDLDGRRIRCSYATDRAS 121
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 59/79 (74%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG L + D+ RL + F+++G+VV ARV+ DR+TGRSRGFGFVT + + + AI A
Sbjct: 41 KVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQA 100
Query: 315 LDGQNLDGRAIRVNVAEDR 333
LDGQ+LDGR IR + A DR
Sbjct: 101 LDGQDLDGRRIRCSYATDR 119
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFV 206
VF+ F+ +K+FVG L Y D ++L F K G V A VI +R+T RSRGFGFV
Sbjct: 30 VFQTLRFMSS---SKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFV 86
Query: 207 TMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 241
T E+A A++ D+DGR + + A R +
Sbjct: 87 TFGASEDASSAIQALDGQDLDGRRIRCSYATDRAS 121
>gi|241831489|ref|XP_002414860.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
gi|215509072|gb|EEC18525.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
Length = 686
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 104/187 (55%), Gaps = 12/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N ++D +KL ++FEK G + A+V+ + ++ ++RGFGFV+ + AE+AVE
Sbjct: 194 VYIKNFGDELDDDKLLVIFEKYGKITSAKVMTD-DSGKNRGFGFVSFEEPDSAERAVEEL 252
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ D+ GR L V +A + + R FE G +YV NL +D+ RL
Sbjct: 253 NGKDMGGRPLYVGRAQKKAERQSELKRHFEQLKQERLNRYQGVNLYVKNLDDALDDERLR 312
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ F G + +A+V+ D GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 313 KEFGPFGNITSAKVMTD-ANGRSKGFGFVCFSSPEEATKAVTEMNGRIVVSKPLYVALAQ 371
Query: 332 DRQRRSS 338
++ R +
Sbjct: 372 RKEDRKA 378
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L +V AMLFEK AG V V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHPEVTE---AMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I + + + + +R P + + G +++ NL +DN + FS
Sbjct: 68 ALDTMNFDAIKNKPIRIMWS-------QRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ RV D E S+G+GFV +E N AI+ ++G L+ + + V R+
Sbjct: 121 AFGNILSCRVATDEEAA-SKGYGFVHFETEEAANKAISKVNGMLLNNKKVYVGKFIPRKE 179
Query: 336 R 336
R
Sbjct: 180 R 180
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 104 EEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLF 163
EEP+ + +E G G P + ERQ E ++E + + L+
Sbjct: 240 EEPDSAERAVEELNGK-DMGGRPLYVGRAQKKAERQSELKRHFEQLKQERLNRYQGVNLY 298
Query: 164 VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHR 223
V NL +D E+L F G + A+V+ + RS+GFGFV S+ EEA KAV
Sbjct: 299 VKNLDDALDDERLRKEFGPFGNITSAKVMTD-ANGRSKGFGFVCFSSPEEATKAVT---- 353
Query: 224 YDIDGRLLT 232
+++GR++
Sbjct: 354 -EMNGRIVV 361
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L EV A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPEVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 312 IAALDGQNLDG---RAIRV 327
ALD N D + IR+
Sbjct: 66 ERALDTMNFDAIKNKPIRI 84
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L F + G V V+ N E+ RSRGFGFVT S
Sbjct: 11 EKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLV 70
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
++ + +DGR + PR Q P+R+ GF ++++G LP V L F+
Sbjct: 71 LQN-GPHQLDGRTIDPKPCNPRTQQKPKRSG-----GFPKVFLGGLPSNVTETDLRTFFN 124
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV+ ++YD+E +SRGFGF++ E + D A NL+G+ + + AE R
Sbjct: 125 RYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAV-DRCVAEHFVNLNGKQVEIKRAEPR 181
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE----LND 310
+++VG L WE L++ F +G+V++ V+ + E+GRSRGFGFVT S L +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
LDG+ +D + + +R F
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGF 102
>gi|168041315|ref|XP_001773137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675496|gb|EDQ61990.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 199
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+F+G L +D ++ L F+K G + A ++ +R T RGFGFVT + + V
Sbjct: 1 GKIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVV- 59
Query: 220 MFHRYDIDGRLLTVNKAAPR-GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
++ IDGR + K+ PR + P+ +I+VG +P + + + F+ G
Sbjct: 60 -LDKHVIDGRTVEAKKSVPRENMAASKGPKTK----KIFVGGIPPSITDEEFKSYFASFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
VV +++ D TGRSRGFGFVT SE + D +A L G+ +
Sbjct: 115 SVVEHQIMQDHSTGRSRGFGFVTFDSEQVVEDILAHGKMHELGGKQV 161
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P+ K+FVG +P + E+ F G+V +++ + T RSRGFGFVT + + E
Sbjct: 87 PKTKKIFVGGIPPSITDEEFKSYFASFGSVVEHQIMQDHSTGRSRGFGFVTFDSEQVVED 146
Query: 217 AVEMFHRYDIDGR 229
+ +++ G+
Sbjct: 147 ILAHGKMHELGGK 159
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+F+G L + F K G + + ++ +R T + RGFGFVT + +K +E
Sbjct: 46 GKIFIGGLSRSTTTVVFTKHFSKYGELTDSVIMKDRHTGQPRGFGFVTYADASVVDKVIE 105
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H +DGR + + + PRG + P+ +I+VG +P + + FS+ GK
Sbjct: 106 DKHI--LDGRTVEIKRTIPRGNT-SKGPKTK----KIFVGGIPTTITEDEFKDYFSKFGK 158
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
V +++ DR TGRSRGFGF+T SE + + I+ L G+ + + AE ++
Sbjct: 159 VAEHQIMQDRSTGRSRGFGFITFDSEQVVEEIISQGKMIELGGKQVEIKKAEPKK 213
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P+ K+FVG +P + ++ F K G V +++ +R T RSRGFGF+T + + E+
Sbjct: 130 PKTKKIFVGGIPTTITEDEFKDYFSKFGKVAEHQIMQDRSTGRSRGFGFITFDSEQVVEE 189
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 247
+ ++ G+ + + KA P+ + P
Sbjct: 190 IISQGKMIELGGKQVEIKKAEPKKPSSDAGP 220
>gi|224137878|ref|XP_002322674.1| predicted protein [Populus trichocarpa]
gi|222867304|gb|EEF04435.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 92/186 (49%), Gaps = 14/186 (7%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P KLFV L ++ SE L F+ G +E VIY++ T +SRG+GF+T +E A+
Sbjct: 65 PVHRKLFVRGLAWNTTSETLCAAFQMHGEIEEGAVIYDKATGKSRGYGFITYKHMESAQS 124
Query: 217 AVEMFHRYDIDGRLLTVNKAA----PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
A+ R ID R+ N A T P+ A R ++YVG L E+ + L
Sbjct: 125 ALGAPSRL-IDSRMAVCNLACEGLTGASTTPDLAQR------KLYVGGLSPEISSEMLLN 177
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL-DGRAIRVNVAE 331
F +G + V YD++T SRGFGFVT + AI D L GR I V +A+
Sbjct: 178 FFGRYGDIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAID--DPHKLFGGRTIIVKLAD 235
Query: 332 DRQRRS 337
+ ++
Sbjct: 236 THRSKT 241
>gi|334350324|ref|XP_001371926.2| PREDICTED: ELAV-like protein 2-like [Monodelphis domestica]
Length = 522
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 10/178 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L V LP + E+ LF G ++ +++ +R T +S G+GFV +AE+AV +
Sbjct: 187 LIVNYLPQSMTQEEFYNLFATVGKIQSCKLVRDRSTGQSLGYGFVNYVDPRDAEQAVCLL 246
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+R + + V+ A P + A +YV LP + LEQ+FS G+++
Sbjct: 247 NRLQCPPKTIKVSFARPSSSSIRDA--------NLYVSGLPRNMMQKDLEQLFSPFGRII 298
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR--VNVAEDRQRRS 337
+R++ DR +G SRG GF+ ++E +AI AL+GQ G + V A+ + +R+
Sbjct: 299 TSRILIDRVSGASRGVGFILFDKKSEAEEAIKALNGQKPCGNRVPLIVKFAQHQTQRT 356
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D L Q+F G V +++ D T + + FGFVTM+S E A+
Sbjct: 438 GWCIFVYNLSPDSDENVLWQLFGPFGAVSKVKIIRDFNTNKCKRFGFVTMTSYNEAALAV 497
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L GR ++V+ ++ ++
Sbjct: 498 ASLNGYCLGGRVLQVSFKTNKIHKA 522
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V ++I + T++ + FGFVTM++ EA AV
Sbjct: 441 IFVYNLSPDSDENVLWQLFGPFGAVSKVKIIRDFNTNKCKRFGFVTMTSYNEAALAVASL 500
Query: 222 HRYDIDGRLLTVN 234
+ Y + GR+L V+
Sbjct: 501 NGYCLGGRVLQVS 513
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
+P + V LP + +F+ GK+ + ++V DR TG+S G+GFV +
Sbjct: 182 DPKTNLIVNYLPQSMTQEEFYNLFATVGKIQSCKLVRDRSTGQSLGYGFVNYVDPRDAEQ 241
Query: 311 AIAALDGQNLDGRAIRVNVA 330
A+ L+ + I+V+ A
Sbjct: 242 AVCLLNRLQCPPKTIKVSFA 261
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP ++ + L LF G + + ++ +R + SRG GF+ EAE+A+
Sbjct: 270 DANLYVSGLPRNMMQKDLEQLFSPFGRIITSRILIDRVSGASRGVGFILFDKKSEAEEAI 329
Query: 219 EMFHRYDIDG-RLLTVNKAAPRGTQ 242
+ + G R+ + K A TQ
Sbjct: 330 KALNGQKPCGNRVPLIVKFAQHQTQ 354
>gi|357485175|ref|XP_003612875.1| 31 kDa ribonucleoprotein [Medicago truncatula]
gi|355514210|gb|AES95833.1| 31 kDa ribonucleoprotein [Medicago truncatula]
Length = 324
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 102/179 (56%), Gaps = 4/179 (2%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L V NLP+ + + LF + GTV E+I +++ + +G+ FVTM + E A+ AV+ F
Sbjct: 98 LIVFNLPWSLSKPDIKDLFGQCGTVIDVEIIKSKD-GKGKGYTFVTMDSGEGAQAAVDKF 156
Query: 222 HRYDIDGRLLTVN--KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
+ +I GR+L V K + P AP E + IY NL W+ + L +F+E+ K
Sbjct: 157 NATEISGRILRVEFAKGFKKPRPPPPAPTPKEARYVIYASNLAWKARSTHLRDIFTENFK 216
Query: 280 V-VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
V+ARVV+ G+S G+GFV+ +E E AI+AL G+ L GR + V ++E + + +
Sbjct: 217 TPVSARVVFQVPGGKSAGYGFVSYHTEEEAEAAISALQGKELLGRPLLVKISERKVKEA 275
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 12/185 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V N+ +V E+ LFE G + A V+ + +SRGFGFV T EEA AVE
Sbjct: 190 IYVKNVDPEVTQEEFVQLFEPFGRITSA-VLQVDDEGKSRGFGFVNFDTHEEAHAAVEAL 248
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
H D+ GR L V +A + + E R +E G +Y+ NL ++D+ RL
Sbjct: 249 HDSDVKGRKLFVARAQKKAEREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDIDDERLR 308
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F G + +A+V+ D E G S+GFGFV SS E A+A ++ + + + + V++A+
Sbjct: 309 GEFEPFGNITSAKVMRD-EKGISKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQ 367
Query: 332 DRQRR 336
R+ R
Sbjct: 368 RREVR 372
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 9/180 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG L V L +F G V V + T RS G+ +V + E+A+E
Sbjct: 7 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 66
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHG 278
+ I GR A R +R P + + G I++ NL ++DN L F+ G
Sbjct: 67 QLNYSLIKGR-------ACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFG 119
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
V++ +V D E GRS+G+GFV + AI A++G L+ + + V R+ R S
Sbjct: 120 NVLSCKVATD-EHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKERQS 178
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G V +V + E RS+G+GFV T E AE A++
Sbjct: 97 IFIKNLDEQIDNKALHDTFAAFGNVLSCKVATD-EHGRSKGYGFVHYETAEAAETAIKAV 155
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ ++ + + V R + + + IYV N+ EV Q+F G++
Sbjct: 156 NGMLLNDKKVYVGHHISRKERQSKIEEMKNQFTNIYVKNVDPEVTQEEFVQLFEPFGRIT 215
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+A + D E G+SRGFGFV + E + A+ AL ++ GR + V A+ + R
Sbjct: 216 SAVLQVDDE-GKSRGFGFVNFDTHEEAHAAVEALHDSDVKGRKLFVARAQKKAER 269
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ L++ NL D+D E+L FE G + A+V+ + E S+GFGFV S+ +EA KA
Sbjct: 289 QGVNLYIKNLEDDIDDERLRGEFEPFGNITSAKVMRD-EKGISKGFGFVCFSSPDEATKA 347
Query: 218 VEMFHRYDIDGRLLTVNKAAPR 239
V + I + L V+ A R
Sbjct: 348 VAEMNNKMIGTKPLYVSLAQRR 369
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG L V A L ++F+ G V + RV D T RS G+ +V + + A
Sbjct: 5 PSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERA 64
Query: 312 IAALDGQNLDGRAIRV 327
+ L+ + GRA R+
Sbjct: 65 LEQLNYSLIKGRACRI 80
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE+ FS +G+V+ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 7 YRCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 66
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQ+LDGR I VN A+
Sbjct: 67 GMNGQDLDGRNITVNEAQ 84
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D + L F G V +++I +RET RSRGFGFVT S+ + A+E
Sbjct: 8 RCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 67
Query: 221 FHRYDIDGRLLTVNKA 236
+ D+DGR +TVN+A
Sbjct: 68 MNGQDLDGRNITVNEA 83
>gi|169772913|ref|XP_001820925.1| glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40]
gi|238490830|ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
gi|83768786|dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697065|gb|EED53406.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
Length = 125
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 58/79 (73%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGNL W ++ L Q FSE G V++A V+ DRETGRSRGFGFVT S++TE + AI
Sbjct: 5 KVYVGNLSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADAAIGG 64
Query: 315 LDGQNLDGRAIRVNVAEDR 333
L+ Q LDGR IRVN+A R
Sbjct: 65 LNEQELDGRRIRVNLANAR 83
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
AK++VGNL ++ + E L F + G V A V+ +RET RSRGFGFVT S EA+ A+
Sbjct: 4 AKVYVGNLSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADAAIG 63
Query: 220 MFHRYDIDGRLLTVNKAAPR 239
+ ++DGR + VN A R
Sbjct: 64 GLNEQELDGRRIRVNLANAR 83
>gi|350635265|gb|EHA23627.1| hypothetical protein ASPNIDRAFT_52492 [Aspergillus niger ATCC 1015]
Length = 580
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 14/177 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V+ V+ + T RSRGFGF+T +
Sbjct: 106 EDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTV 165
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
M + +DG+++ +A PR Q + + +I+VG + E + ++ F++
Sbjct: 166 --MVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEHDFKEFFAQF 215
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ-NLDGRAIRVNVAEDR 333
G+V++A ++ D++TGR RGFGFVT SE + AAL G + G+ I V A+ R
Sbjct: 216 GRVIDATLMIDKDTGRPRGFGFVTFDSEAAVE---AALSGPLEICGKPIEVKKAQPR 269
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+K+FVG + + + F + G V A ++ +++T R RGFGFVT + E A+
Sbjct: 192 SKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALS 251
Query: 220 MFHRYDIDGRLLTVNKAAPRG 240
+I G+ + V KA PRG
Sbjct: 252 --GPLEICGKPIEVKKAQPRG 270
>gi|413926094|gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 443
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E + FEK G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 114 GKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 173
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H IDGR + V + PR + P+ +I++G LP + L+ FS +G
Sbjct: 174 DDHV--IDGRTVEVKRTVPREEMITKDGPKTR----KIFIGGLPPSLTEDELKDHFSSYG 227
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
VV +++ D TGRSRGFGF+T SE + I+ ++L G+ + + AE ++ S
Sbjct: 228 NVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGS 286
>gi|403335220|gb|EJY66784.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 307
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 98/176 (55%), Gaps = 7/176 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
++A L+VGNL V+ E + LF + G + + ++ T+ G+GFV T E+A+ A
Sbjct: 18 QEATLYVGNLDTKVNEELVWELFLQCGAIVNVHIPRDKVTNEHSGYGFVEFKTEEDADYA 77
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ H + G+ + VNKA+ + R E G ++VGNL +VD L VFS
Sbjct: 78 IKIMHMVKLFGKPIKVNKAS-------QDKRTQEVGANVFVGNLHEDVDEKMLRDVFSSF 130
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G V++ +++ D ET S+ +GFV+ + + +I A++GQ L G+ I V+ A +
Sbjct: 131 GIVLSTKIMRDPETQVSKRYGFVSYDNFESSDASIQAMNGQYLCGKPIDVSYAYKK 186
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+YVGNL +V+ + ++F + G +VN + D+ T G+GFV +E + + AI +
Sbjct: 22 LYVGNLDTKVNEELVWELFLQCGAIVNVHIPRDKVTNEHSGYGFVEFKTEEDADYAIKIM 81
Query: 316 DGQNLDGRAIRVNVAEDRQR 335
L G+ I+VN A +R
Sbjct: 82 HMVKLFGKPIKVNKASQDKR 101
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A +FVGNL DVD + L +F G V +++ + ET S+ +GFV+ E ++ +++
Sbjct: 107 ANVFVGNLHEDVDEKMLRDVFSSFGIVLSTKIMRDPETQVSKRYGFVSYDNFESSDASIQ 166
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWE--VDNARLEQVFSEH 277
+ + G+ + V+ A + E+ + E NLP + D ++L ++
Sbjct: 167 AMNGQYLCGKPIDVSYAYKKDAIGEKHGTLAERVLAFNKPNLPGQKVADTSKLPPTTNQF 226
Query: 278 GKVVNA 283
G +N
Sbjct: 227 GGGMNG 232
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 103/187 (55%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D EKL LF K G V+ + E+ +S+GFGFV+ E+A+KAV+
Sbjct: 193 VYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-ESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ +++GR + V +A +G + R FE G +YV NL +D+ RL
Sbjct: 252 NGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLR 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 332 DRQRRSS 338
++ R +
Sbjct: 370 RKEERQA 376
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I GR L + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFDVIKGRPLRIMWS-------QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G S+G+GFV + AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L +V A L + FS G +++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D GR +R+
Sbjct: 66 ERALDTMNFDVIKGRPLRI 84
>gi|327285428|ref|XP_003227435.1| PREDICTED: polyadenylate-binding protein 4-like [Anolis
carolinensis]
Length = 616
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D E+L LF K G +V+ + T +S+GFGFV+ EEA KAVE
Sbjct: 180 VYIKNFGDDMDDERLKELFGKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEEANKAVEEM 238
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ DI+G+++ V +A + + R FE G +Y+ NL +D+ +L
Sbjct: 239 NGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 298
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 299 KEFSPFGSITSAKVML--EEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 356
Query: 332 DRQRRSS 338
++ R +
Sbjct: 357 RKEERKA 363
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 99/183 (54%), Gaps = 15/183 (8%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G + +V+ + + S+G+ FV T + A++A+E
Sbjct: 88 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 145
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR------IYVGNLPWEVDNARLEQVFS 275
+ ++ R + V G R R E G + +Y+ N ++D+ RL+++F
Sbjct: 146 NGMLLNDRKVFV------GRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFG 199
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
++GK ++ +V+ D TG+S+GFGFV+ E N A+ ++G++++G+ + V A+ +
Sbjct: 200 KYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEEANKAVEEMNGKDINGKMVFVGRAQKKVE 258
Query: 336 RSS 338
R +
Sbjct: 259 RQA 261
>gi|378733387|gb|EHY59846.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 8/180 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVGNL ++VD L FE+ G + ++ +R+T RS+GFG+V +A KA
Sbjct: 259 LFVGNLSWNVDENWLRSEFEEFGELSGVRLMTDRQTGRSKGFGYVEFVDAADAAKAYAAK 318
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAP--------RVFEPGFRIYVGNLPWEVDNARLEQV 273
++DGR L V+ A R + A ++ EP +++GNL ++ + +
Sbjct: 319 QGAELDGRPLNVDFANARSNDNKPADNRRKSYGDQLGEPTDTLFLGNLSFDCTQEDVSEA 378
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F+ HG V+ R+ DRETG +GFG+VT S E A+ A+ G + R IR++ ++ R
Sbjct: 379 FAPHGTVMGIRLPTDRETGAPKGFGYVTFGSVDEAKAALEAMQGGYIKNRPIRLDYSQPR 438
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G ++VGNL W VD L F E G++ R++ DR+TGRS+GFG+V + A
Sbjct: 256 GPNLFVGNLSWNVDENWLRSEFEEFGELSGVRLMTDRQTGRSKGFGYVEFVDAADAAKAY 315
Query: 313 AALDGQNLDGRAIRVNVAEDR 333
AA G LDGR + V+ A R
Sbjct: 316 AAKQGAELDGRPLNVDFANAR 336
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 61/84 (72%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P ++++G + + D L + FS++G+VV+AR++ DRETGRSRGFGF+T +S E + A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 312 IAALDGQNLDGRAIRVNVAEDRQR 335
I ALDGQ+L GR IRVN A +R R
Sbjct: 100 IQALDGQDLHGRPIRVNYANERPR 123
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLF+G + Y D + L F K G V A +I +RET RSRGFGF+T ++VEEA A++
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQA 102
Query: 221 FHRYDIDGRLLTVNKAAPR 239
D+ GR + VN A R
Sbjct: 103 LDGQDLHGRPIRVNYANER 121
>gi|317027293|ref|XP_001400598.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus niger CBS
513.88]
Length = 561
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 14/177 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V+ V+ + T RSRGFGF+T +
Sbjct: 106 EDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTV 165
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
M + +DG+++ +A PR Q + + +I+VG + E + ++ F++
Sbjct: 166 --MVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEHDFKEFFAQF 215
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ-NLDGRAIRVNVAEDR 333
G+V++A ++ D++TGR RGFGFVT SE + AAL G + G+ I V A+ R
Sbjct: 216 GRVIDATLMIDKDTGRPRGFGFVTFDSEAAVE---AALSGPLEICGKPIEVKKAQPR 269
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+K+FVG + + + F + G V A ++ +++T R RGFGFVT + E A+
Sbjct: 192 SKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALS 251
Query: 220 MFHRYDIDGRLLTVNKAAPRG 240
+I G+ + V KA PRG
Sbjct: 252 --GPLEICGKPIEVKKAQPRG 270
>gi|326477036|gb|EGE01046.1| RNA recognition motif-containing protein [Trichophyton equinum CBS
127.97]
Length = 300
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 97/186 (52%), Gaps = 12/186 (6%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
+P A ++VGN+ +D+ + L K G V +IY+ SRGFG+V +VEEA
Sbjct: 84 KPQPKATVYVGNILFDITAADLKEYASKYGKVLGTRIIYD-SRGLSRGFGYVRFESVEEA 142
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
+KA++ H + +GR L+VN A R QP+R EP I+VGN+ +V + L
Sbjct: 143 KKAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRK---MEPTRTIFVGNIAHQVTDRDLHA 199
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA---LDGQNLDGRAIRVNV 329
+F + V + RV DR TG RGF T++ AIA L GQ GR +R++
Sbjct: 200 LFDDIPNVFDVRVAVDRRTGMPRGFAHAEF---TDVESAIAGFEMLKGQAPYGRPLRLDY 256
Query: 330 AEDRQR 335
+ +R
Sbjct: 257 SHSARR 262
>gi|125538654|gb|EAY85049.1| hypothetical protein OsI_06408 [Oryza sativa Indica Group]
Length = 504
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 93/183 (50%), Gaps = 22/183 (12%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E + FEK G + + ++ ++ T RGFGFVT S +K +E
Sbjct: 175 GKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 234
Query: 220 MFHRYDIDGRLL-------TVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
H IDGR L V K PR PR +I+VG LP + L +
Sbjct: 235 DEHV--IDGRTLKGQSQGSNVIKDGPR-------PR------KIFVGGLPSSLTEDELRE 279
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
FS +GK+V +++ D TGRSRGFGFVT SE + I+ ++L G+ + + AE
Sbjct: 280 HFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEP 339
Query: 333 RQR 335
++
Sbjct: 340 KKH 342
>gi|15228191|ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog [Arabidopsis thaliana]
gi|9279720|dbj|BAB01277.1| poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6 [Arabidopsis thaliana]
Length = 537
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 97/184 (52%), Gaps = 11/184 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL V + L LF + GTV + V+ RSRGFGFV E A+KA+E
Sbjct: 204 VYVKNLIETVTDDCLHTLFSQYGTVS-SVVVMRDGMGRSRGFGFVNFCNPENAKKAMESL 262
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVF------EPGFR---IYVGNLPWEVDNARLEQ 272
+ + L V KA + + E + F +P R +YV NL ++ RL +
Sbjct: 263 CGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPNMRWSNLYVKNLSESMNETRLRE 322
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
+F +G++V+A+V+ E GRS+GFGFV S+ E A L+G +DG+ I V VAE
Sbjct: 323 IFGCYGQIVSAKVMC-HENGRSKGFGFVCFSNCEESKQAKRYLNGFLVDGKPIVVRVAER 381
Query: 333 RQRR 336
++ R
Sbjct: 382 KEDR 385
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 7/167 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VG+L DV + L F V + N T +S + ++ + A A+
Sbjct: 23 LYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASNAMTRL 82
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKV 280
+ D+ G+ + + + R R R GF +YV NL + ++ LE++F G +
Sbjct: 83 NHSDLKGKAMRI-MWSQRDLAYRRRTRT---GFANLYVKNLDSSITSSCLERMFCPFGSI 138
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
++ +VV E G+S+GFGFV +E A +AL G + G+ + V
Sbjct: 139 LSCKVV--EENGQSKGFGFVQFDTEQSAVSARSALHGSMVYGKKLFV 183
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 151 EEFVEPPED--AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
+ F+ P + L+V NL ++ +L +F G + A+V+ + E RS+GFGFV
Sbjct: 293 DNFIAKPNMRWSNLYVKNLSESMNETRLREIFGCYGQIVSAKVMCH-ENGRSKGFGFVCF 351
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIY 257
S EE+++A + + +DG+ + V A + + +R + F+ R Y
Sbjct: 352 SNCEESKQAKRYLNGFLVDGKPIVVRVAERKEDRIKRLQQYFQAQPRQY 400
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+YVG+L +V L FS + VV+ + + TG+S + ++ S ++A+ L
Sbjct: 23 LYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASNAMTRL 82
Query: 316 DGQNLDGRAIRV-----NVAEDRQRRSSF 339
+ +L G+A+R+ ++A R+ R+ F
Sbjct: 83 NHSDLKGKAMRIMWSQRDLAYRRRTRTGF 111
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFV NLP D++ L FE+ G V +VI + T S+ GF++ ++AE AVE+
Sbjct: 184 LFVKNLPDSWDTDALLENFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEIM 243
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARLE 271
H +I+G+ L +A + + +E G +YV NL +D+ L
Sbjct: 244 HEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEGLR 303
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ F + G + +A+V+ D GRS+GFGFV SS E A+ ++G+ G+ + V +A+
Sbjct: 304 EAFKQFGNITSAKVITDL-NGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQ 362
Query: 332 DRQRRSS 338
++ R +
Sbjct: 363 RKEDRKA 369
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L D+ L F+ +G V V + T RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHG 278
+ I G+ + + +R P + G +++ NL +DN L FS G
Sbjct: 62 TMNFDVIKGKPIRI-------MWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSSFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI---RVNVAEDRQR 335
+++ +VV D S+GFGFV S+ AI ++G ++ + + R DR R
Sbjct: 115 NILSCKVVCD--INGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMR 172
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
++E ++ + L+V NL +D E L F++ G + A+VI + RS+GFGFV S
Sbjct: 276 KQERIQRYQGVNLYVKNLDDSIDDEGLREAFKQFGNITSAKVITDL-NGRSKGFGFVCFS 334
Query: 210 TVEEAEKAVEMFHRYDIDGRLLTVNKA 236
+ EEA KAV + G+ L V A
Sbjct: 335 SPEEATKAVTEMNGRIFGGKPLYVGLA 361
>gi|297803432|ref|XP_002869600.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315436|gb|EFH45859.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 148 FEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVT 207
EE++ + KLF+G + +D D E+L F K G + A ++ +R T R+RGFGF+
Sbjct: 3 LEEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIV 62
Query: 208 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP----ERAP-RVFEPGF-------- 254
+ AE+ + ++ IDGR + KA PR Q +P + P
Sbjct: 63 FADPSVAERVI--MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGAR 120
Query: 255 --RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
+I+VG LP + A + F + G + + V+YD T R RGFGF+T SE + D +
Sbjct: 121 TKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESV-DMV 179
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRSS 338
L+G+ + V A ++ S+
Sbjct: 180 LHKTFHELNGKMVEVKRAVPKELSST 205
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 57/81 (70%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
FR +VG L W D+ LE+ FS G++V ++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 FRCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEKAMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAEDRQ 334
++GQNLDGR I VN A+ R+
Sbjct: 68 GMNGQNLDGRNITVNEAQSRR 88
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F G + +++I +RET RSRGFGFVT + A+E
Sbjct: 9 RCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEKAMRDAIEG 68
Query: 221 FHRYDIDGRLLTVNKAAPR 239
+ ++DGR +TVN+A R
Sbjct: 69 MNGQNLDGRNITVNEAQSR 87
>gi|317142960|ref|XP_003189459.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 531
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 14/177 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V+ V+ + T RSRGFGF+T +
Sbjct: 109 EDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTV 168
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
M + +DG+++ +A PR Q + + +I+VG + E + +Q F +
Sbjct: 169 --MVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEQDFKQFFMQF 218
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA-ALDGQNLDGRAIRVNVAEDR 333
G+VV+A ++ D++TGR RGFGFVT SE + A++ L+ + G+ I V A+ R
Sbjct: 219 GRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLE---ILGKPIEVKKAQPR 272
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G L WE + L+ FS+ G+V V+ D TGRSRGFGF+T +N +
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVM-- 169
Query: 315 LDGQNLDGRAI--RVNVAEDRQRRSS 338
+ LDG+ I + + D Q ++S
Sbjct: 170 VKEHYLDGKIIDPKRAIPRDEQEKTS 195
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+K+FVG + + + + F + G V A ++ +++T R RGFGFVT ++E AVE
Sbjct: 195 SKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF----DSEAAVE 250
Query: 220 --MFHRYDIDGRLLTVNKAAPRG 240
+ +I G+ + V KA PRG
Sbjct: 251 AALSRPLEILGKPIEVKKAQPRG 273
>gi|294951822|ref|XP_002787139.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
gi|239901796|gb|EER18935.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 14/185 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+GNLP+ + E L +F G +E + + E+ + +GF F+ + + AEKAV
Sbjct: 514 VFIGNLPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAEKAVGK- 572
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAP------------RVFEPGFRIYVGNLPWEVDNAR 269
+ D +GR L +N + P+ + E ++VGNLPW +
Sbjct: 573 NGEDCEGRDLRINYSFPKNDNAHGGKGKGGKGKGKGHHELGEKSASVFVGNLPWSMTQDW 632
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L +VF + G + + DRETG RGF ++ +E +A L G +L+GR IRVN
Sbjct: 633 LYEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAENAT-KLSGTDLEGRQIRVNY 691
Query: 330 AEDRQ 334
+ R+
Sbjct: 692 NQPRE 696
>gi|380091978|emb|CCC10246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 456
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 99/182 (54%), Gaps = 10/182 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VGNL + +D L FE+ + A V+ +RE+ RSRGFG+V ++A+KA +
Sbjct: 169 LWVGNLGWGIDDAILFAEFEECEGAKSARVVTDRESGRSRGFGYVDFENNDQAQKAYDAK 228
Query: 222 HRYDIDGRLLTVN---KAAPRGTQPERAPRVFEPGFRI-------YVGNLPWEVDNARLE 271
++GR + ++ K A Q + A R + G I +VGN+P+ D + +
Sbjct: 229 SGGLLEGREMRLDFASKDAGNKPQAKAADRAAKHGDTISPESDTLFVGNMPFTADESAVS 288
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F+ V + R+ D+E+GR +GF +VT +S + +A L+G +L GR +R++ A+
Sbjct: 289 DFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNAFDQLNGSDLQGRPVRLDYAK 348
Query: 332 DR 333
R
Sbjct: 349 PR 350
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 99/185 (53%), Gaps = 12/185 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L++ NL +V E+ LF + G+V A V + E RS+GFGFV + EEA+ AV+
Sbjct: 228 LYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDE-GRSKGFGFVNYESHEEAQAAVDNL 286
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
H D+ G+ L V +A + + E R +E G +YV NL +VD+ +L
Sbjct: 287 HDTDLKGKKLYVTRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYVKNLEDDVDDDKLR 346
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F G + + +V+ D E G S+GFGFV SS E AIA ++ + + + + V++A+
Sbjct: 347 AEFEPFGTITSCKVMSD-EKGSSKGFGFVCFSSPDEATKAIAEMNNKMIGSKPLYVSLAQ 405
Query: 332 DRQRR 336
R+ R
Sbjct: 406 RREVR 410
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G V +V + E RS+G+GFV T E AE A++
Sbjct: 135 IFIKNLDEQIDNKALHDTFVAFGNVLSCKVATD-EQGRSKGYGFVHYETAEAAETAIKAV 193
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ ++ + + V PR + + + +Y+ NL EV E++F+ +G V
Sbjct: 194 NGMLLNDKKVYVGPHIPRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFEELFNRYGSVT 253
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+A V D E GRS+GFGFV S E A+ L +L G+ + V A+ + R
Sbjct: 254 SAIVQVDDE-GRSKGFGFVNYESHEEAQAAVDNLHDTDLKGKKLYVTRAQKKAER 307
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 9/180 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG L V + +F G V V + T RS G+ +V + E+A+E
Sbjct: 45 ASLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTADGERALE 104
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHG 278
+ I GR + + +R P + + G I++ NL ++DN L F G
Sbjct: 105 QLNYSLIKGRPCRIMWS-------QRDPALRKTGQGNIFIKNLDEQIDNKALHDTFVAFG 157
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
V++ +V D E GRS+G+GFV + AI A++G L+ + + V R+ R S
Sbjct: 158 NVLSCKVATD-EQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGPHIPRKERQS 216
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ L+V NL DVD +KL FE GT+ +V+ + E S+GFGFV S+ +EA KA
Sbjct: 327 QGVNLYVKNLEDDVDDDKLRAEFEPFGTITSCKVMSD-EKGSSKGFGFVCFSSPDEATKA 385
Query: 218 VEMFHRYDIDGRLLTVNKAAPR 239
+ + I + L V+ A R
Sbjct: 386 IAEMNNKMIGSKPLYVSLAQRR 407
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG L V A + ++F+ G V + RV D T RS G+ +V + + A
Sbjct: 43 PSASLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTADGERA 102
Query: 312 IAALDGQNLDGRAIRV 327
+ L+ + GR R+
Sbjct: 103 LEQLNYSLIKGRPCRI 118
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG + ++ D+ L + F ++G+V+ ARV+ DRETGRSRGF FVT +S E + AI A
Sbjct: 41 KVFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQA 100
Query: 315 LDGQNLDGRAIRVNVAEDRQRRS 337
LDGQ+L GR +RVN A DR R S
Sbjct: 101 LDGQDLHGRRVRVNYANDRPRTS 123
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+K+FVG + Y D L F K G V A VI +RET RSRGF FVT ++ EEA A++
Sbjct: 40 SKVFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQ 99
Query: 220 MFHRYDIDGRLLTVNKAAPR 239
D+ GR + VN A R
Sbjct: 100 ALDGQDLHGRRVRVNYANDR 119
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 61/82 (74%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
PG +++VGNL W DN L FS+ G+VV++ V+ DRETGRSRGFGFVT SS + A
Sbjct: 9 PGTKVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESASAA 68
Query: 312 IAALDGQNLDGRAIRVNVAEDR 333
+ A++GQ+L+GR IRVN+A +R
Sbjct: 69 VDAMNGQDLNGRNIRVNLANER 90
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
E K+FVGNL + D+ LA F + G V + V+ +RET RSRGFGFVT S+ E A
Sbjct: 6 EAAPGTKVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESA 65
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPR 239
AV+ + D++GR + VN A R
Sbjct: 66 SAAVDAMNGQDLNGRNIRVNLANER 90
>gi|336267120|ref|XP_003348326.1| hypothetical protein SMAC_02824 [Sordaria macrospora k-hell]
Length = 377
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 99/182 (54%), Gaps = 10/182 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VGNL + +D L FE+ + A V+ +RE+ RSRGFG+V ++A+KA +
Sbjct: 169 LWVGNLGWGIDDAILFAEFEECEGAKSARVVTDRESGRSRGFGYVDFENNDQAQKAYDAK 228
Query: 222 HRYDIDGRLLTVN---KAAPRGTQPERAPRVFEPGFRI-------YVGNLPWEVDNARLE 271
++GR + ++ K A Q + A R + G I +VGN+P+ D + +
Sbjct: 229 SGGLLEGREMRLDFASKDAGNKPQAKAADRAAKHGDTISPESDTLFVGNMPFTADESAVS 288
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F+ V + R+ D+E+GR +GF +VT +S + +A L+G +L GR +R++ A+
Sbjct: 289 DFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNAFDQLNGSDLQGRPVRLDYAK 348
Query: 332 DR 333
R
Sbjct: 349 PR 350
>gi|50308683|ref|XP_454345.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643480|emb|CAG99432.1| KLLA0E08779p [Kluyveromyces lactis]
Length = 475
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 20/212 (9%)
Query: 136 GERQEESGEEGVFEEEEFVEP---------PEDAKLFVGNLPYDVDSEKLAMLFEKAGTV 186
GE+Q+E G+E E++ P D L+VGNLP +D + L F+ G++
Sbjct: 68 GEKQQEEGDE----EDDSAAPVLATQGGREKSDKILYVGNLPKSIDDDLLKQYFQIGGSI 123
Query: 187 EIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 246
++I ++ + + FV +A A + + +++G++L +N A Q ++
Sbjct: 124 SSVKIIPDKNSQECN-YAFVEYFEPHDANVAYQTLNGKEVEGKVLKINWA----FQSQQV 178
Query: 247 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
+ F ++VG+L +VD+A L F E + A V++D ++GRSRG+GFV+ +
Sbjct: 179 NS--DETFNLFVGDLNVDVDDATLAGTFKEFPSFIQAHVMWDMQSGRSRGYGFVSFGEQD 236
Query: 307 ELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
+ A+ G L+GRA+R+N A R+ + S
Sbjct: 237 QAQVAMETKQGFELNGRALRINWASKREPQQS 268
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 13/187 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NL DVD ++L LF + G + +V+ + + SRGFGFV EEA+KA
Sbjct: 189 EFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRD-VSGHSRGFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL V +A R + R FE G +YV NL +D+
Sbjct: 248 VVNMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 EKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQ 334
+AE R+
Sbjct: 366 ALAEGRK 372
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G + +V+ + SRGFGFV T E A+ A+
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG--SRGFGFVHFETHEAAQNAISTM 158
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR------IYVGNLPWEVDNARLEQVFS 275
+ ++ R + V G R R E G R IYV NL +VD RL+ +FS
Sbjct: 159 NGMLLNDRKVFV------GHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDLFS 212
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
+ GK+++ +V+ D +G SRGFGFV E A+ ++G+ + GR + V A+ R
Sbjct: 213 QFGKMLSVKVMRD-VSGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKRVE 271
Query: 336 R 336
R
Sbjct: 272 R 272
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L DV L F AG + V + T RS G+ ++ +AE+A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I G+ + + + +R P + + G I++ NL +DN L FS G
Sbjct: 71 TMNFEVIKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +VV D E G SRGFGFV + +AI+ ++G L+ R + V + R+ R
Sbjct: 124 NILSCKVVCD-EHG-SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGHFKSRRER 179
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 252 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 309 NDAIAALDGQNLDGRAIRV 327
A+ ++ + + G+ IR+
Sbjct: 66 ERALDTMNFEVIKGQPIRI 84
>gi|391863705|gb|EIT73005.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 545
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 14/177 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V+ V+ + T RSRGFGF+T +
Sbjct: 97 EDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTV 156
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
M + +DG+++ +A PR Q + + +I+VG + E + +Q F +
Sbjct: 157 --MVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEQDFKQFFMQF 206
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA-ALDGQNLDGRAIRVNVAEDR 333
G+VV+A ++ D++TGR RGFGFVT SE + A++ L+ + G+ I V A+ R
Sbjct: 207 GRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLE---ILGKPIEVKKAQPR 260
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+K+FVG + + + + F + G V A ++ +++T R RGFGFVT ++E AVE
Sbjct: 183 SKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF----DSEAAVE 238
Query: 220 --MFHRYDIDGRLLTVNKAAPRG 240
+ +I G+ + V KA PRG
Sbjct: 239 AALSRPLEILGKPIEVKKAQPRG 261
>gi|390432205|gb|AFL91694.1| glycine-rich RNA binding protein [Raphanus sativus var.
raphanistroides]
Length = 153
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 58/78 (74%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE FS++G V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFSQYGDVLDSKIINDRETGRSRGFGFVTFKDEKSMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
A++GQ+LDGR+I VN A+
Sbjct: 68 AMNGQDLDGRSITVNEAQ 85
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F + G V +++I +RET RSRGFGFVT + A+E
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGDVLDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEA 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ D+DGR +TVN+A
Sbjct: 69 MNGQDLDGRSITVNEA 84
>gi|326933139|ref|XP_003212666.1| PREDICTED: polyadenylate-binding protein 4-like [Meleagris
gallopavo]
Length = 636
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 102/187 (54%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D E+L LF K G +V+ + T +S+GFGFV+ E+A KAVE
Sbjct: 199 VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVEEM 257
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ DI+G+++ V +A + + R FE G +Y+ NL +D+ +L
Sbjct: 258 NGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 317
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 318 KEFSPFGSITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 375
Query: 332 DRQRRSS 338
++ R +
Sbjct: 376 RKEERKA 382
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 100/183 (54%), Gaps = 15/183 (8%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G + +V+ + + S+G+ FV T + A++A+E
Sbjct: 107 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 164
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR------IYVGNLPWEVDNARLEQVFS 275
+ ++ R + V G R R E G + +Y+ N ++D+ RL+++FS
Sbjct: 165 NGMLLNDRKVFV------GRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFS 218
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
++GK ++ +V+ D TG+S+GFGFV+ + N A+ ++G++++G+ + V A+ +
Sbjct: 219 KYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVE 277
Query: 336 RSS 338
R +
Sbjct: 278 RQA 280
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
ERQ E ++E + + L++ NL +D EKL F G++ A+V+ E
Sbjct: 277 ERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--E 334
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 231
RS+GFGFV S+ EEA KAV +++GR++
Sbjct: 335 DGRSKGFGFVCFSSPEEATKAVT-----EMNGRIV 364
>gi|242067831|ref|XP_002449192.1| hypothetical protein SORBIDRAFT_05g006270 [Sorghum bicolor]
gi|241935035|gb|EES08180.1| hypothetical protein SORBIDRAFT_05g006270 [Sorghum bicolor]
Length = 499
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 249 VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS--ET 306
+F P FRIYVGNL VDN RL Q FS++GKV ARV+ +T RSRGFGFVT+++ +
Sbjct: 407 LFGPYFRIYVGNLSRNVDNYRLGQFFSKYGKVAEARVMCHIKTKRSRGFGFVTLATVVDH 466
Query: 307 ELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
E AIA LDGQ LD R +RV +AE +Q
Sbjct: 467 EQEHAIAKLDGQILDRRPVRVKLAEQKQ 494
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTV--EEAEKAV 218
+++VGNL +VD+ +L F K G V A V+ + +T RSRGFGFVT++TV E E A+
Sbjct: 413 RIYVGNLSRNVDNYRLGQFFSKYGKVAEARVMCHIKTKRSRGFGFVTLATVVDHEQEHAI 472
Query: 219 EMFHRYDIDGRLL 231
+DG++L
Sbjct: 473 A-----KLDGQIL 480
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NLP DVD + L LF + G + +V+ + + RSR FGFV EEA+KA
Sbjct: 189 EFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRD-SSGRSRCFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL ++A R + R FE G +YV NL +D+
Sbjct: 248 VVHMNGKEVSGRLLYASRAQKRVERQNELKRRFEQMKQDRLSRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 GKLRKEFSPYGVITSAKVM--TEGSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 16/183 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG++ V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G SRGFGFV + AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVVCD-EHG-SRGFGFVHFETYEAAQQAINTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 RSS 338
R++
Sbjct: 179 RAA 181
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 23/213 (10%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
ER+ E G + E +++ N D+D ++L +F + G +V+ +
Sbjct: 178 EREAEVGARAI----------EFTNVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMD-N 226
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----- 251
RS+GFGFV EEA+KAV + +I+GRLL V +A R + R FE
Sbjct: 227 NGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRLLYVGRAQKRLERQSELKRKFEQMKQE 286
Query: 252 -----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
G +YV NL +D+ RL + FS +G + +A+V+ E GRS+GFGFV SS
Sbjct: 287 RVNRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVM--TEGGRSKGFGFVCFSSPE 344
Query: 307 ELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 345 EATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L DV L F AG + V + T RS G+ ++ +AE+A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I GR + + + +R P + + G +++ NL +DN L FS G
Sbjct: 71 TMNFEVIKGRPIRIMWS-------QRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +VV D E G SRG+GFV + AI ++G L+ R + V + R+ R
Sbjct: 124 NILSCKVVCD-ENG-SRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHFKSRKER 179
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 252 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 309 NDAIAALDGQNLDGRAIRV 327
A+ ++ + + GR IR+
Sbjct: 66 ERALDTMNFEVIKGRPIRI 84
>gi|255089439|ref|XP_002506641.1| predicted protein [Micromonas sp. RCC299]
gi|226521914|gb|ACO67899.1| predicted protein [Micromonas sp. RCC299]
Length = 285
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ + +VGNL ++ + E L + GTV AEV + RS+G+G V T + A A
Sbjct: 107 DGCRCYVGNLAWETNEESLIAHCSQVGTVVQAEV-AKQPGGRSKGWGLVDFETPDAANSA 165
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----GFRIYVGNLPWEVDNARLEQV 273
+ H D+ GR + V G P P G +I V NLPW + L QV
Sbjct: 166 INTLHNSDLQGRSIIVRLERAGGANKSGGPNAGRPEASSGLQIVVRNLPWSTTSEDLRQV 225
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
F + G V+ A V +TGRS+G+G V + + AI +G L+ R +++ +
Sbjct: 226 FQQVGTVIKAEAVCHADTGRSKGWGTVLFETREQAQAAIQGFNGVELEHRPMQIKL 281
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+L+VGN+P+ ++L +F GT+ + ++ R+ RSRG+G V S V EA+ A++
Sbjct: 8 RLYVGNIPWSTTVDELRGIFSGCGTITLVDIPTGRQ-GRSRGYGIVEYSNVNEAQVAIQT 66
Query: 221 FHRYDIDGRLLTV------NKAAPRGTQPERAPRVFEP---GFRIYVGNLPWEVDNARLE 271
+ + R +TV K+AP + R+ P G R YVGNL WE + L
Sbjct: 67 LDGHTLGDRNITVREDKAPTKSAPSKSGGNRSTIGDTPAADGCRCYVGNLAWETNEESLI 126
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
S+ G VV A V + GRS+G+G V + N AI L +L GR+I V +
Sbjct: 127 AHCSQVGTVVQAEVA-KQPGGRSKGWGLVDFETPDAANSAINTLHNSDLQGRSIIVRL 183
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P R+YVGN+PW L +FS G + + R+ GRSRG+G V S+ E A
Sbjct: 5 PTNRLYVGNIPWSTTVDELRGIFSGCGTITLVDIPTGRQ-GRSRGYGIVEYSNVNEAQVA 63
Query: 312 IAALDGQNLDGRAIRV 327
I LDG L R I V
Sbjct: 64 IQTLDGHTLGDRNITV 79
>gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni]
gi|194166592|gb|EDW81493.1| GK12096 [Drosophila willistoni]
Length = 385
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 94/189 (49%), Gaps = 10/189 (5%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
+++ EP KLF+G L Y E L FEK G + V+ + T RSRGFGF+T
Sbjct: 19 DDDSITEPEHMRKLFIGGLDYRTSDENLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITY 78
Query: 209 ---STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEV 265
S ++EA+KA + IDGR++ +A PR Q +P +++VG L +
Sbjct: 79 SHSSMIDEAQKA----RPHKIDGRVVEPKRAVPR--QDIDSPNAGATVKKLFVGALKDDH 132
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
D L FS G +V+ +V D+ETG+ RGF FV + D + L+G+ +
Sbjct: 133 DEQSLRDYFSNFGSIVDINIVMDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQLNGKMV 191
Query: 326 RVNVAEDRQ 334
V A +Q
Sbjct: 192 DVKKALPKQ 200
>gi|317142958|ref|XP_001819217.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 557
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 14/177 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V+ V+ + T RSRGFGF+T +
Sbjct: 109 EDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTV 168
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
M + +DG+++ +A PR Q + + +I+VG + E + +Q F +
Sbjct: 169 --MVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEANEQDFKQFFMQF 218
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA-ALDGQNLDGRAIRVNVAEDR 333
G+VV+A ++ D++TGR RGFGFVT SE + A++ L+ + G+ I V A+ R
Sbjct: 219 GRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLE---ILGKPIEVKKAQPR 272
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G L WE + L+ FS+ G+V V+ D TGRSRGFGF+T +N +
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVM-- 169
Query: 315 LDGQNLDGRAI--RVNVAEDRQRRSS 338
+ LDG+ I + + D Q ++S
Sbjct: 170 VKEHYLDGKIIDPKRAIPRDEQEKTS 195
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+K+FVG + + + + F + G V A ++ +++T R RGFGFVT ++E AVE
Sbjct: 195 SKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF----DSEAAVE 250
Query: 220 --MFHRYDIDGRLLTVNKAAPRG 240
+ +I G+ + V KA PRG
Sbjct: 251 AALSRPLEILGKPIEVKKAQPRG 273
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NLP DVD + L LF + G + +V+ + + SR FGFV EEA+KA
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL +A R + R FE G +YV NL +D+
Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 DKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +V D E G SRGFGFV + AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 61/84 (72%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P ++++G + + D L + FS++G+VV+AR++ DRETGRSRGFGF+T +S E + A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 312 IAALDGQNLDGRAIRVNVAEDRQR 335
I ALDGQ+L GR IRVN A +R R
Sbjct: 100 IQALDGQDLHGRPIRVNYANERPR 123
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLF+G + Y D + L F K G V A +I +RET RSRGFGF+T ++VEEA A++
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQA 102
Query: 221 FHRYDIDGRLLTVNKAAPR 239
D+ GR + VN A R
Sbjct: 103 LDGQDLHGRPIRVNYANER 121
>gi|408391758|gb|EKJ71126.1| hypothetical protein FPSE_08632 [Fusarium pseudograminearum CS3096]
Length = 770
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 100/182 (54%), Gaps = 13/182 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFV +LP SE L F + V+ A V+ +++T SRG+GFVT++ E+A +A +
Sbjct: 44 LFVRSLPPGATSESLTDFFSQHYPVKHATVVVDQKTKESRGYGFVTLADAEDAVEAKKAL 103
Query: 222 HRYDIDGRLLTVNKAAPR------GTQPERAPR---VFEPGFRIYVGNLPWEVDNA-RLE 271
+ D +GR + ++ A PR G P R + P ++ + NLPW + A +LE
Sbjct: 104 DKQDWNGRRIRIDVAEPRQRNNTTGELPAHKIRKEEIQRPN-KLIIRNLPWSIKKAEQLE 162
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+F +GKV A + + G+ +GFGFVT+ A+ A++G+ +DGR + V+ A
Sbjct: 163 HLFRSYGKVKFADLPQTK--GKLKGFGFVTLRGRPNAERALEAINGKEIDGRTLAVDWAV 220
Query: 332 DR 333
D+
Sbjct: 221 DK 222
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++V +LP + L FS+H V +A VV D++T SRG+GFVT++ + +A AL
Sbjct: 44 LFVRSLPPGATSESLTDFFSQHYPVKHATVVVDQKTKESRGYGFVTLADAEDAVEAKKAL 103
Query: 316 DGQNLDGRAIRVNVAEDRQRRSS 338
D Q+ +GR IR++VAE RQR ++
Sbjct: 104 DKQDWNGRRIRIDVAEPRQRNNT 126
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 122 DWGEPEGEDTVVEAGERQEESGE--EGVFEEEEFVEPPEDAKLFVGNLPYDVD-SEKLAM 178
DW V E +R +GE +EE P KL + NLP+ + +E+L
Sbjct: 107 DWNGRRIRIDVAEPRQRNNTTGELPAHKIRKEEIQRP---NKLIIRNLPWSIKKAEQLEH 163
Query: 179 LFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 238
LF G V+ A++ + + +GFGFVT+ AE+A+E + +IDGR L V+ A
Sbjct: 164 LFRSYGKVKFADLPQTK--GKLKGFGFVTLRGRPNAERALEAINGKEIDGRTLAVDWAVD 221
Query: 239 RGT-----QPE 244
+ T QPE
Sbjct: 222 KDTWDKQQQPE 232
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 23/98 (23%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NLP+ E+L F G + A V+ ++ T++ G GFV +EA+ ++
Sbjct: 341 VFVRNLPFTTTDEQLKGFFGHFGKIRYARVVMDKVTEKPAGTGFVCFIDADEAKSCIKGA 400
Query: 222 HR-----------------------YDIDGRLLTVNKA 236
R Y +DGRLL+V +A
Sbjct: 401 PRTQAPAATAKTSILQDESADPDGKYTLDGRLLSVTQA 438
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 23/107 (21%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE-------- 307
++V NLP+ + +L+ F GK+ ARVV D+ T + G GFV E
Sbjct: 341 VFVRNLPFTTTDEQLKGFFGHFGKIRYARVVMDKVTEKPAGTGFVCFIDADEAKSCIKGA 400
Query: 308 --------------LNDAIAALDGQ-NLDGRAIRVNVAEDRQRRSSF 339
L D A DG+ LDGR + V A ++Q +S
Sbjct: 401 PRTQAPAATAKTSILQDESADPDGKYTLDGRLLSVTQAVNKQEATSL 447
>gi|409045875|gb|EKM55355.1| hypothetical protein PHACADRAFT_255926 [Phanerochaete carnosa
HHB-10118-sp]
Length = 672
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 99/185 (53%), Gaps = 12/185 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL +V E+ LFE+ G V A VI E S+GFGFV EEA+ AV+
Sbjct: 232 IYVKNLDPEVSLEEFTQLFEQFGNVTSA-VIQTDEEGNSKGFGFVNFEFHEEAQNAVDGL 290
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
H + +GR L V++A + + E + +E G +Y+ NL E+D+ RL
Sbjct: 291 HDTEYNGRKLFVSRAQKKAEREEELRKSYEHAKMEKMSKYQGVNLYIKNLDDEIDDERLR 350
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F G + +A+V+ D E G S+GFGFV SS E A+A ++ + + + + V++A+
Sbjct: 351 AEFEPFGTITSAKVMRD-EKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGAKPLYVSLAQ 409
Query: 332 DRQRR 336
R+ R
Sbjct: 410 RREVR 414
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P A L+VG L V L +F G V V + T RS G+ +V + E
Sbjct: 45 PSPSASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGE 104
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVF 274
+A+E + I GR A R +R P + + G I++ NL +DN L F
Sbjct: 105 RALEQLNYSLIKGR-------ACRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTF 157
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
+ G V++ +V D E GRS+G+GFV + AI A++G L+ + + V ++
Sbjct: 158 AAFGNVLSCKVATD-EQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISKK 216
Query: 335 RRSS 338
R S
Sbjct: 217 ERQS 220
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ L++ NL ++D E+L FE GT+ A+V+ + E S+GFGFV S+ +EA KA
Sbjct: 331 QGVNLYIKNLDDEIDDERLRAEFEPFGTITSAKVMRD-EKGSSKGFGFVCFSSPDEATKA 389
Query: 218 VEMFHRYDIDGRLLTVNKAAPR 239
V + I + L V+ A R
Sbjct: 390 VAEMNNKMIGAKPLYVSLAQRR 411
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 247 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
P++ P +YVG L V A L ++F+ G V + RV D T RS G+ +V +
Sbjct: 42 PQLPSPSASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAA 101
Query: 307 ELNDAIAALDGQNLDGRAIRV 327
+ A+ L+ + GRA R+
Sbjct: 102 DGERALEQLNYSLIKGRACRI 122
>gi|323346676|gb|EGA80960.1| Hrp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 576
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E K+F+G L +D + L F K GTV +++ + T RSRGFGF++ ++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 216
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V+ H +DG+++ +A PR Q + +I+VG + +V E+ FS+
Sbjct: 217 VKTQHI--LDGKVIDPKRAIPRDEQDKTG--------KIFVGGIGPDVRPKEFEEFFSQW 266
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR--QR 335
G +++A+++ D++TG+SRGFGFVT S + D + + R I + AE R Q+
Sbjct: 267 GTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKFIDFKDRKIEIKRAEPRHMQQ 325
Query: 336 RSS 338
+SS
Sbjct: 326 KSS 328
>gi|18416794|ref|NP_567753.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930503|gb|AAL31937.1|AF419605_1 AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|20453245|gb|AAM19861.1| AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|332659832|gb|AEE85232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 455
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 150 EEEFVEPPED-AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
EE+ +E D KLF+G + +D D E+L F K G + A ++ +R T R+RGFGF+
Sbjct: 4 EEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVF 63
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP----ERAP-RVFEPGF--------- 254
+ AE+ + ++ IDGR + KA PR Q +P + P
Sbjct: 64 ADPSVAERVI--MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGART 121
Query: 255 -RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+I+VG LP + A + F + G + + V+YD T R RGFGF+T SE + D +
Sbjct: 122 KKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESV-DMVL 180
Query: 314 ALDGQNLDGRAIRVNVAEDRQRRSS 338
L+G+ + V A ++ S+
Sbjct: 181 HKTFHELNGKMVEVKRAVPKELSST 205
>gi|300121030|emb|CBK21412.2| unnamed protein product [Blastocystis hominis]
Length = 296
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 84/141 (59%), Gaps = 4/141 (2%)
Query: 190 EVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP---RGTQPERA 246
+++Y+R T R RGFGFV+ ST + KA+E + I+GR + V A + ++ R
Sbjct: 33 QIVYDRNTGRPRGFGFVSFSTEDGLNKAMEQ-NGSLINGREIRVEVAKGSLGKNSENVRQ 91
Query: 247 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
R + +++V +L W + L FS+ GK+ + +++ DR+TGRSRG G V S+
Sbjct: 92 NRNYNDENKVFVSSLSWNTTDEMLRDAFSQCGKIEHYKILTDRQTGRSRGMGIVKFSTRE 151
Query: 307 ELNDAIAALDGQNLDGRAIRV 327
E+N+AI+ ++G LDGR I V
Sbjct: 152 EMNNAISTMNGSTLDGRQIAV 172
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+V ++VYDR TGR RGFGFV+ S+E LN A+ +G ++GR IRV VA+
Sbjct: 29 LVTLQIVYDRNTGRPRGFGFVSFSTEDGLNKAMEQ-NGSLINGREIRVEVAK 79
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
++ K+FV +L ++ E L F + G +E +++ +R+T RSRG G V ST EE A
Sbjct: 97 DENKVFVSSLSWNTTDEMLRDAFSQCGKIEHYKILTDRQTGRSRGMGIVKFSTREEMNNA 156
Query: 218 VEMFHRYDIDGRLLTV 233
+ + +DGR + V
Sbjct: 157 ISTMNGSTLDGRQIAV 172
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 60/84 (71%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G L W VD+ +L + FS G+V ARV+ DRETGRSRGFGFV S +AI+A
Sbjct: 38 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 97
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSS 338
+DG+ +DGR +RVN+A +R RS+
Sbjct: 98 MDGKEIDGRQVRVNMANERPLRST 121
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 46/79 (58%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLF+G L + VD KL F G V A VI +RET RSRGFGFV S + A++A+
Sbjct: 38 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 97
Query: 221 FHRYDIDGRLLTVNKAAPR 239
+IDGR + VN A R
Sbjct: 98 MDGKEIDGRQVRVNMANER 116
>gi|119596296|gb|EAW75890.1| hCG2019100, isoform CRA_d [Homo sapiens]
Length = 639
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NLP DVD + L LF + G + +V+ + + SR FGFV EEA+KA
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL +A R + R FE G +YV NL +D+
Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 DKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L DV L F AG + V + T RS G+ ++ +AE+A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ + G+ + + + +R P + + G I++ NL +DN L FS G
Sbjct: 71 TMNFEMLKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +V D E G SRGFGFV + AI ++G L+ R + V + R+ R
Sbjct: 124 NILSCKVACD-EHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRER 179
>gi|229595173|ref|XP_001019281.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila]
gi|1262277|gb|AAA96781.1| nucleolar phosphoprotein [Tetrahymena thermophila]
gi|225566349|gb|EAR99036.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila SB210]
Length = 476
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 162 LFVGNLPYDVDSEKLA-MLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ V L +D D + L E G+V ++ N E RS+G FV+ T E KAVEM
Sbjct: 265 VIVKGLSFDADENDIGNFLDENCGSVARVNLLKN-EQGRSKGIAFVSFETEEGCNKAVEM 323
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ + GR L + K P+ +P P V E I+VGNL + D L++ F+ GKV
Sbjct: 324 SN-SEFMGRYLIIEKTKPKTERPAHLP-VDEDSKTIFVGNLSFRTDKETLKKFFASCGKV 381
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
+AR+ G+SRGFG V + + +A+ + G+ +DGR I+V+VA R +R F
Sbjct: 382 ADARIA--EADGKSRGFGHVEFEERSGVENALKKV-GEQIDGRPIKVDVAASRGKREGF 437
>gi|242093370|ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
gi|241915398|gb|EER88542.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
Length = 414
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 94/176 (53%), Gaps = 7/176 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E F+K G + + ++ ++ T RGFGFVT S ++ +E
Sbjct: 99 GKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLE 158
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H IDGR + V + P+ + P+ +I+VG +P + +L++ FS +G
Sbjct: 159 DAHV--IDGRTVEVKRTVPKEEMSSKDGPKTK----KIFVGGIPSSLTEDKLKEHFSSYG 212
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
KVV +++ D TGRSRGFGFVT SE + ++ +L G+ + + AE ++
Sbjct: 213 KVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKK 268
>gi|46111259|ref|XP_382687.1| hypothetical protein FG02511.1 [Gibberella zeae PH-1]
Length = 767
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 100/182 (54%), Gaps = 13/182 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFV +LP SE L F + V+ A V+ +++T SRG+GFVT++ E+A +A +
Sbjct: 44 LFVRSLPPGATSESLTDFFSQHYPVKHATVVVDQKTKESRGYGFVTLADAEDAVEAKKAL 103
Query: 222 HRYDIDGRLLTVNKAAPR------GTQPERAPR---VFEPGFRIYVGNLPWEVDNA-RLE 271
+ D +GR + ++ A PR G P R + P ++ + NLPW + A +LE
Sbjct: 104 DKQDWNGRRIRIDVAEPRQRNNTTGELPAHKIRKEEIQRPN-KLIIRNLPWSIKKAEQLE 162
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+F +GKV A + + G+ +GFGFVT+ A+ A++G+ +DGR + V+ A
Sbjct: 163 HLFRSYGKVKFADLPQTK--GKLKGFGFVTLRGRPNAERALEAINGKEIDGRTLAVDWAV 220
Query: 332 DR 333
D+
Sbjct: 221 DK 222
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++V +LP + L FS+H V +A VV D++T SRG+GFVT++ + +A AL
Sbjct: 44 LFVRSLPPGATSESLTDFFSQHYPVKHATVVVDQKTKESRGYGFVTLADAEDAVEAKKAL 103
Query: 316 DGQNLDGRAIRVNVAEDRQRRSS 338
D Q+ +GR IR++VAE RQR ++
Sbjct: 104 DKQDWNGRRIRIDVAEPRQRNNT 126
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 122 DWGEPEGEDTVVEAGERQEESGE--EGVFEEEEFVEPPEDAKLFVGNLPYDVD-SEKLAM 178
DW V E +R +GE +EE P KL + NLP+ + +E+L
Sbjct: 107 DWNGRRIRIDVAEPRQRNNTTGELPAHKIRKEEIQRP---NKLIIRNLPWSIKKAEQLEH 163
Query: 179 LFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 238
LF G V+ A++ + + +GFGFVT+ AE+A+E + +IDGR L V+ A
Sbjct: 164 LFRSYGKVKFADLPQTK--GKLKGFGFVTLRGRPNAERALEAINGKEIDGRTLAVDWAVD 221
Query: 239 RGT-----QPE 244
+ T QPE
Sbjct: 222 KDTWDKQQQPE 232
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 23/98 (23%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NLP+ E+L F G + A V+ ++ T++ G GFV +EA+ ++
Sbjct: 344 VFVRNLPFTTTDEQLKGFFGHFGKIRYARVVMDKVTEKPAGTGFVCFIDADEAKSCIKGA 403
Query: 222 HR-----------------------YDIDGRLLTVNKA 236
R Y +DGRLL+V +A
Sbjct: 404 PRTQAPAATAKTSILQDESADPDGKYTLDGRLLSVTQA 441
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 23/107 (21%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE-------- 307
++V NLP+ + +L+ F GK+ ARVV D+ T + G GFV E
Sbjct: 344 VFVRNLPFTTTDEQLKGFFGHFGKIRYARVVMDKVTEKPAGTGFVCFIDADEAKSCIKGA 403
Query: 308 --------------LNDAIAALDGQ-NLDGRAIRVNVAEDRQRRSSF 339
L D A DG+ LDGR + V A ++Q +S
Sbjct: 404 PRTQAPAATAKTSILQDESADPDGKYTLDGRLLSVTQAVNKQEATSL 450
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 102/187 (54%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D E+L LF K G +V+ + T +S+GFGFV+ E+A KAVE
Sbjct: 193 VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVEEM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ DI+G+++ V +A + + R FE G +Y+ NL +D+ +L
Sbjct: 252 NGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKNLDDTIDDEKLR 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KEFSPFGAITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 332 DRQRRSS 338
++ R +
Sbjct: 370 RKEERKA 376
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG V V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + +R P + + G +++ NL +DN L FS
Sbjct: 68 ALDTMNFDVIKGKPIRI-------MWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G S+G+ FV ++ + AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-ENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
ERQ E + ++E + + L++ NL +D EKL F G + A+V+ E
Sbjct: 271 ERQAELKRKFEQLKQERLSRYQGVNLYIKNLDDTIDDEKLRKEFSPFGAITSAKVML--E 328
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 231
RS+GFGFV S+ EEA KAV +++GR++
Sbjct: 329 DGRSKGFGFVCFSSPEEATKAVT-----EMNGRIV 358
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L +V A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D G+ IR+
Sbjct: 66 ERALDTMNFDVIKGKPIRI 84
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L F + G V V+ N E+ RSRGFGFVT S
Sbjct: 11 EKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLV 70
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
++ + +DGR + PR Q P+R+ GF ++++G LP V L F+
Sbjct: 71 LQN-GPHQLDGRTIDPKPCNPRTQQKPKRSG-----GFPKVFLGGLPSNVTETDLRSFFT 124
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
GKV+ ++YD+E +SRGFGF++ E + D A NL+G+ + + AE R
Sbjct: 125 RFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAV-DRCVAEHFVNLNGKQVEIKRAEPR 181
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE----LND 310
+++VG L WE L++ F +G+V++ V+ + E+GRSRGFGFVT S L +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
LDG+ +D + + +R F
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGF 102
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 103/187 (55%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D EKL LF K G V+ + ++ +S+GFGFV+ E+A+KAV+
Sbjct: 180 VYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-DSGKSKGFGFVSFERHEDAQKAVDDM 238
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ +++GR + V +A +G + R FE G +YV NL +D+ RL
Sbjct: 239 NGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLR 298
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 299 KEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 356
Query: 332 DRQRRSS 338
++ R +
Sbjct: 357 RKEERQA 363
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 99/183 (54%), Gaps = 15/183 (8%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G + +V+ + + S+G+GFV T E AE+A+E
Sbjct: 88 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKM 145
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR------IYVGNLPWEVDNARLEQVFS 275
+ ++ R + V G R R E G R +Y+ N ++D+ +L+++FS
Sbjct: 146 NGMLLNDRKVFV------GRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFS 199
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
++G ++ RV+ D ++G+S+GFGFV+ + A+ ++G+ L+GR + V A+ +
Sbjct: 200 KYGPALSIRVMTD-DSGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGE 258
Query: 336 RSS 338
R +
Sbjct: 259 RQN 261
>gi|171687819|ref|XP_001908850.1| hypothetical protein [Podospora anserina S mat+]
gi|170943871|emb|CAP69523.1| unnamed protein product [Podospora anserina S mat+]
Length = 459
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+ GNL + +D L F+ + A V+ ++E+ RSRGFG++ T E AEKA
Sbjct: 214 ATLWCGNLGWGIDDNILYEEFKDFEGLTGARVVSDKESGRSRGFGYIDFDTHENAEKAFN 273
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQ---------PERAPRVFEPGFRIYVGNLPWEVDNARL 270
+ D+ GR + ++ AA + V P ++VGNLP+ D +
Sbjct: 274 AKNGGDLQGREMRLDFAAKPAAAPQDRAAARASKHGDVVSPPSDTLFVGNLPFSADEDGV 333
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
F+E KV + R+ D E+GR +GF +V+ S + +A L+G ++DGR +R++ A
Sbjct: 334 SAFFNEVAKVQSLRIPTDMESGRPKGFAYVSFYSIDDAKNAFEQLNGADIDGRPVRLDFA 393
Query: 331 EDR 333
+ R
Sbjct: 394 KPR 396
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 102/187 (54%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D E+L LF K G +V+ + T +S+GFGFV+ E+A KAVE
Sbjct: 193 VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVEEM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ DI+G+++ V +A + + R FE G +Y+ NL +D+ +L
Sbjct: 252 NGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KEFSPFGSITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369
Query: 332 DRQRRSS 338
++ R +
Sbjct: 370 RKEERKA 376
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG V V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + +R P + + G +++ NL +DN L FS
Sbjct: 68 ALDTMNFDVIKGKPIRI-------MWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G S+G+ FV ++ + AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-ENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
ERQ E ++E + + L++ NL +D EKL F G++ A+V+ E
Sbjct: 271 ERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--E 328
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 231
RS+GFGFV S+ EEA KAV +++GR++
Sbjct: 329 DGRSKGFGFVCFSSPEEATKAVT-----EMNGRIV 358
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L +V A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D G+ IR+
Sbjct: 66 ERALDTMNFDVIKGKPIRI 84
>gi|356547577|ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 352
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 8/179 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+F+G L D E FEK G + + ++ +R T R RGFGF+T + ++ ++
Sbjct: 18 GKIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQ 77
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H ++G+ + + + P+G+ + +I+VG +P V L+ FS++GK
Sbjct: 78 ENHV--VNGKQVEIKRTIPKGSSQANDFKTK----KIFVGGIPTSVSEDELKNFFSKYGK 131
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
VV ++ D T RSRGFGF+ SE +++ +A DG +D +V + + ++SS
Sbjct: 132 VVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILA--DGNMIDMGGTQVEIKKAEPKKSS 188
>gi|323303112|gb|EGA56914.1| Hrp1p [Saccharomyces cerevisiae FostersB]
Length = 550
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E K+F+G L +D + L F K GTV +++ + T RSRGFGF++ ++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 216
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V+ H +DG+++ +A PR Q + +I+VG + +V E+ FS+
Sbjct: 217 VKTQHI--LDGKVIDPKRAIPRDEQDKTG--------KIFVGGIGPDVRPKEFEEFFSQW 266
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR--QR 335
G +++A+++ D++TG+SRGFGFVT S + D + + R I + AE R Q+
Sbjct: 267 GTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKFIDFKDRKIEIKRAEPRHMQQ 325
Query: 336 RSS 338
+SS
Sbjct: 326 KSS 328
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 101/186 (54%), Gaps = 13/186 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V N P D EKL +F + G ++ V N E +S+GFGFV + AE+AV +
Sbjct: 182 IYVKNFPPDTTDEKLRDMFSEFGEIKSCCVEKNPE-GKSKGFGFVCFHDPDHAEQAVRVM 240
Query: 222 HRYDIDGRLLTVNKAA---------PRGTQPERAPRV--FEPGFRIYVGNLPWEVDNARL 270
H +I+GR L ++A + + +RA R+ + PG +YV NL +D+ RL
Sbjct: 241 HGKEINGRALYASRAQRKEERQEELKQRLEKQRAERLSKYVPGVNLYVKNLDDNIDDERL 300
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
++ FS +G + +A+V+ D GRS+GFGFV + + A+ ++ + + + V +A
Sbjct: 301 KEAFSHYGPITSAKVMTD-ANGRSKGFGFVCFTQPEQAARAVTEMNATLVGSKPLYVALA 359
Query: 331 EDRQRR 336
+ ++ R
Sbjct: 360 QRKEDR 365
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D ++L F G + ++ + E S+G+GFV E AE+A+E
Sbjct: 91 IFIKNLDKTIDQKQLYDTFSFIGKILSCKIAMD-EHGNSKGYGFVHFEKEECAERAIEKI 149
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRV-FEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ I+ R++ V K P + + ++ F IYV N P + + +L +FSE G++
Sbjct: 150 NGMMINDRVVYVGKFIPSSDRKSASGKLRFN---NIYVKNFPPDTTDEKLRDMFSEFGEI 206
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+ V + E G+S+GFGFV A+ + G+ ++GRA+ + A+ ++ R
Sbjct: 207 KSCCVEKNPE-GKSKGFGFVCFHDPDHAEQAVRVMHGKEINGRALYASRAQRKEER 261
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VG+L L F + GTV A + + T S G+G+V ++AE+A+E
Sbjct: 3 LYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALENL 62
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ GR + + + +R P + + G I++ NL +D +L FS GK+
Sbjct: 63 NYESFMGRPIRIMWS-------QRDPSLRKSGKGNIFIKNLDKTIDQKQLYDTFSFIGKI 115
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
++ ++ D E G S+G+GFV E AI ++G ++ R + V
Sbjct: 116 LSCKIAMD-EHGNSKGYGFVHFEKEECAERAIEKINGMMINDRVVYV 161
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NLP DVD + L LF + G + +V+ + + SR FGFV EEA+KA
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL +A R + R FE G +YV NL +D+
Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 DKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +V D E G SRGFGFV + AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
>gi|151945512|gb|EDN63753.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407229|gb|EDV10496.1| nuclear polyadenylated RNA-binding protein 4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341455|gb|EDZ69508.1| YOL123Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270127|gb|EEU05357.1| Hrp1p [Saccharomyces cerevisiae JAY291]
Length = 534
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E K+F+G L +D + L F K GTV +++ + T RSRGFGF++ ++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 216
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V+ H +DG+++ +A PR Q + +I+VG + +V E+ FS+
Sbjct: 217 VKTQHI--LDGKVIDPKRAIPRDEQDKTG--------KIFVGGIGPDVRPKEFEEFFSQW 266
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR--QR 335
G +++A+++ D++TG+SRGFGFVT S + D + + R I + AE R Q+
Sbjct: 267 GTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKFIDFKDRKIEIKRAEPRHMQQ 325
Query: 336 RSS 338
+SS
Sbjct: 326 KSS 328
>gi|366988347|ref|XP_003673940.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
gi|342299803|emb|CCC67559.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
Length = 506
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLF+G L ++ +KL F K G V +++ + T RSRGFGF+T ++
Sbjct: 191 ECCKLFIGGLNWETTEDKLKDYFSKYGNVVDLKIMKDNATGRSRGFGFLTFELSSSVDEV 250
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V+ H +DG+++ +A PR Q + +I+VG + +V E+ F++
Sbjct: 251 VKTQHI--LDGKVIDPKRAIPREEQDKTG--------KIFVGGIGPDVRPKEFEEFFAQW 300
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G +++A+++ D++TGRSRGFGF+T S +E D + + G+ I + A R
Sbjct: 301 GTIIDAQLMLDKDTGRSRGFGFITYDS-SEAVDRVCQNKYIDFKGKQIEIKRAAPRH 356
>gi|259149364|emb|CAY86168.1| Hrp1p [Saccharomyces cerevisiae EC1118]
Length = 534
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E K+F+G L +D + L F K GTV +++ + T RSRGFGF++ ++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 216
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V+ H +DG+++ +A PR Q + +I+VG + +V E+ FS+
Sbjct: 217 VKTQHI--LDGKVIDPKRAIPRDEQDKTG--------KIFVGGIGPDVRPKEFEEFFSQW 266
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR--QR 335
G +++A+++ D++TG+SRGFGFVT S + D + + R I + AE R Q+
Sbjct: 267 GTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKFIDFKDRKIEIKRAEPRHMQQ 325
Query: 336 RSS 338
+SS
Sbjct: 326 KSS 328
>gi|259483749|tpe|CBF79395.1| TPA: heterogeneous nuclear ribonucleoprotein HRP1 (AFU_orthologue;
AFUA_2G06090) [Aspergillus nidulans FGSC A4]
Length = 559
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 14/177 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V+ V+ + T RSRGFGF+T +
Sbjct: 108 EDGKMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTV 167
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
M + +DG+++ +A PR Q + + +I+VG + E +Q F +
Sbjct: 168 --MVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATEQDFKQFFMQF 217
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA-ALDGQNLDGRAIRVNVAEDR 333
G+V++A ++ D++TGR RGFGFVT SE + A++ L+ + G+ I V A+ R
Sbjct: 218 GRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLE---ILGKTIEVKKAQPR 271
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G L WE + L++ FS+ G+V V+ D TGRSRGFGF+T +N +
Sbjct: 111 KMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVM-- 168
Query: 315 LDGQNLDGRAI--RVNVAEDRQRRSS 338
+ LDG+ I + + D Q ++S
Sbjct: 169 VKEHYLDGKIIDPKRAIPRDEQEKTS 194
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+K+FVG + + + F + G V A ++ +++T R RGFGFVT ++E AVE
Sbjct: 194 SKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTF----DSEAAVE 249
Query: 220 --MFHRYDIDGRLLTVNKAAPRG 240
+ +I G+ + V KA PRG
Sbjct: 250 AALSRPLEILGKTIEVKKAQPRG 272
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NLP DVD + L LF + G + +V+ + + SR FGFV EEA+KA
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL +A R + R FE G +YV NL +D+
Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 DKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +V D E G SRGFGFV + AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
>gi|115461392|ref|NP_001054296.1| Os04g0682400 [Oryza sativa Japonica Group]
gi|113565867|dbj|BAF16210.1| Os04g0682400 [Oryza sativa Japonica Group]
Length = 1008
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
++ L+VGNLP V S KL LF G + + V+ + T S+G+GFV S A +A
Sbjct: 291 DNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEA 350
Query: 218 VEMFHRYDIDGRLLTVNKAA-PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + ++G L V P + P ++YV NL ++ RL +F
Sbjct: 351 IKRMNGRLVEGTALKVRVTGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLP 410
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
G+V NA+V D TG S+G+GFV SS +A+ L+G+ +DGR I V V+
Sbjct: 411 FGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVS 464
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 19/190 (10%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
AKL+V NL +++++L LF G V A+V + T S+G+GFV S+ A +AV
Sbjct: 388 AKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVI 447
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPE---------RAPRVFEPGF----------RIYVGN 260
+ +DGR + V + T P R V P +YV N
Sbjct: 448 HLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCN 507
Query: 261 LPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL 320
+P +D +L ++F GK+ +ARVV D +T ++G+GF+ + AIAA++G +
Sbjct: 508 MPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALV 567
Query: 321 DGRAIRVNVA 330
G I V VA
Sbjct: 568 GGEMIIVRVA 577
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG +P + ++ LF G V A + R + +G V A A++
Sbjct: 686 ANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF------RFQRYGMVRFDNPSCAAAAID 739
Query: 220 MFHRYDIDGRLLTVNKA-------APRGTQPERAPRVFEPG----FRIYVGNLPWEVDNA 268
Y I G +L V A A +G + E G +YV +LP V+N
Sbjct: 740 HLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSN-EQGQIDMTNLYVSHLPSYVNNE 798
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
RL +F G++ A+VV +R TG S+GFGFV + A+ ++G LDG + V
Sbjct: 799 RLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVR 858
Query: 329 VA 330
+A
Sbjct: 859 IA 860
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+ L+V N+P +D++KL LF G + A V+ + +T ++G+GF+ + E A KA+
Sbjct: 501 SNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIA 560
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP-----GFRIYVGNLPWEVDNARLEQVF 274
+ + G ++ V A G P + + R+Y+ NLP + ++ +F
Sbjct: 561 AMNGALVGGEMIIVRVA---GLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLF 617
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ G++ +V+ + E + V + A+ +DG ++G+ + V +E
Sbjct: 618 APFGQIT--KVLMNLE------YSLVWYADAPSATKAVQHMDGYMVEGKRLVVKRSE 666
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NLP DVD + L LF + G + +V+ + + SR FGFV EEA+KA
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL +A R + R FE G +YV NL +D+
Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 DKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +V D E G SRGFGFV + AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 58/81 (71%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W DN LE FS +G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAEDRQ 334
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P D + FVG L + D+ L F G + +++I +RET RSRGFGFVT S+ +
Sbjct: 4 PDVDYRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMR 63
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPR 239
A+E + ++DGR +TVN+A R
Sbjct: 64 DAIEGMNGKELDGRNITVNEAQSR 87
>gi|6324449|ref|NP_014518.1| Hrp1p [Saccharomyces cerevisiae S288c]
gi|2500574|sp|Q99383.1|HRP1_YEAST RecName: Full=Nuclear polyadenylated RNA-binding protein 4;
AltName: Full=Cleavage factor IB; Short=CFIB
gi|1016290|gb|AAA79097.1| nuclear polyadenylated RNA-binding protein [Saccharomyces
cerevisiae]
gi|1420003|emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae]
gi|1550721|emb|CAA64546.1| RNA binding protein [Saccharomyces cerevisiae]
gi|1657691|gb|AAB18142.1| Hrp1p [Saccharomyces cerevisiae]
gi|285814768|tpg|DAA10661.1| TPA: Hrp1p [Saccharomyces cerevisiae S288c]
gi|349581049|dbj|GAA26207.1| K7_Hrp1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296592|gb|EIW07694.1| Hrp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 534
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E K+F+G L +D + L F K GTV +++ + T RSRGFGF++ ++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 216
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V+ H +DG+++ +A PR Q + +I+VG + +V E+ FS+
Sbjct: 217 VKTQHI--LDGKVIDPKRAIPRDEQDKTG--------KIFVGGIGPDVRPKEFEEFFSQW 266
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR--QR 335
G +++A+++ D++TG+SRGFGFVT S + D + + R I + AE R Q+
Sbjct: 267 GTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKFIDFKDRKIEIKRAEPRHMQQ 325
Query: 336 RSS 338
+SS
Sbjct: 326 KSS 328
>gi|365763141|gb|EHN04671.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 534
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E K+F+G L +D + L F K GTV +++ + T RSRGFGF++ ++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 216
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V+ H +DG+++ +A PR Q + +I+VG + +V E+ FS+
Sbjct: 217 VKTQHI--LDGKVIDPKRAIPRDEQDKTG--------KIFVGGIGPDVRPKEFEEFFSQW 266
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR--QR 335
G +++A+++ D++TG+SRGFGFVT S + D + + R I + AE R Q+
Sbjct: 267 GTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKFIDFKDRKIEIKRAEPRHMQQ 325
Query: 336 RSS 338
+SS
Sbjct: 326 KSS 328
>gi|326496905|dbj|BAJ98479.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 102/175 (58%), Gaps = 5/175 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLFVGN+P+ + + LF + G V+ EVI ++ R RGF FVTM+T EEA VE
Sbjct: 61 KLFVGNMPFTFSAAETEKLFAECGVVKDVEVIKMKDG-RKRGFAFVTMATAEEAAAVVEK 119
Query: 221 FHRYDIDGRLLTVN-KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
F +DI+GR++ V + R P +P +++YV NL W+ +A L++ FS+
Sbjct: 120 FDGHDINGRVIKVEFSKSFRKPAPPSSPDTIVAKYKLYVSNLAWKARSADLKEFFSQFNP 179
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
V+A +V+D +S G+GFV+ ++ E A++ L+G+ L R + + ED++
Sbjct: 180 -VSANIVFDDR--KSAGYGFVSFGTKEEAEAALSELNGKELMERPVILRWREDKE 231
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NLP DVD + L LF + G + +V+ + + SR FGFV EEA+KA
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL +A R + R FE G +YV NL +D+
Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 DKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +V D E G SRGFGFV + AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
>gi|149244172|ref|XP_001526629.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449023|gb|EDK43279.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 510
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 9/185 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E A LFVG L +++D + L FE G V A VI R T +SRG+G+V T AEKA
Sbjct: 258 EGATLFVGRLSWNIDDDWLKKEFEHLGDVIGARVIMERATGKSRGYGYVDFKTKAAAEKA 317
Query: 218 VEMFHRYDIDGRLLTVNKAA--PRGTQPERAPRVFE-------PGFRIYVGNLPWEVDNA 268
+ +IDGR + ++ + P ++ R + P +++GNL + +
Sbjct: 318 LAEMQGKEIDGRPINLDMSTGKPHASKANAGDRARQFGDSQSPPSDTLFIGNLSFNANRD 377
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
L ++F E+G V++ RV +T + +GFG+V SS E A+ AL+G+ ++ R R++
Sbjct: 378 SLFEIFGEYGTVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYIENRPCRLD 437
Query: 329 VAEDR 333
+ R
Sbjct: 438 FSTPR 442
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%)
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
E G ++VG L W +D+ L++ F G V+ ARV+ +R TG+SRG+G+V ++
Sbjct: 257 EEGATLFVGRLSWNIDDDWLKKEFEHLGDVIGARVIMERATGKSRGYGYVDFKTKAAAEK 316
Query: 311 AIAALDGQNLDGRAIRVNVA 330
A+A + G+ +DGR I ++++
Sbjct: 317 ALAEMQGKEIDGRPINLDMS 336
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 93/185 (50%), Gaps = 15/185 (8%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L F + G V V+ N E+ RSRGFGFVT S
Sbjct: 11 EKGKLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLV 70
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
++ + +DGR + PR Q P+R+ GF ++++G LP V L F
Sbjct: 71 LQN-GPHQLDGRTIDPKPCNPRTLQKPKRS-----GGFPKVFLGGLPSNVTETDLRSFFQ 124
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ---NLDGRAIRVNVAED 332
GKV+ ++YD+E +SRGFGF++ E DA+ G+ NL+G+ + + AE
Sbjct: 125 RFGKVMEVVIMYDQEKKKSRGFGFLSFEDE----DAVDRCVGEHFVNLNGKQVEIKRAEP 180
Query: 333 RQRRS 337
R S
Sbjct: 181 RDSSS 185
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE----LND 310
+++VG L WE L++ FS +G+V++ V+ + E+GRSRGFGFVT S + L +
Sbjct: 14 KLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQN 73
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
LDG+ +D + + +R F
Sbjct: 74 GPHQLDGRTIDPKPCNPRTLQKPKRSGGF 102
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 12/186 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LFVGNL ++VD E L FE G + ++ +R++ RSRGFG+V +A KA
Sbjct: 302 ANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADAAKAYN 361
Query: 220 MFHRYDIDGRLLTVNKAAPR-----GTQPERAPRVFEPGFR-------IYVGNLPWEVDN 267
+IDGR + ++ A R Q R G + ++VGN+P+ +
Sbjct: 362 AKKDTEIDGRKINLDYATGRPANNNNNQDRAQARARNFGDQTSPESDTLFVGNIPFSANE 421
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+ ++F + G +V R+ D E+GR +GFG+V SS E A L+G L+GR +R+
Sbjct: 422 DSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDLNGAELNGRPVRL 481
Query: 328 NVAEDR 333
+ + R
Sbjct: 482 DFSTPR 487
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 105/188 (55%), Gaps = 13/188 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETD-RSRGFGFVTMSTVEEAEKAVEM 220
++V N+P+DV E+L+ LF K GT I + R+ D S+GFGFV ++A+ AV+
Sbjct: 211 IYVKNIPFDVTDEELSQLFGKYGT--ITSCVITRDDDGTSKGFGFVNFEKHQDAQNAVDD 268
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARL 270
H+ D G+ L V++A + + E R +E G +YV NL ++D+ RL
Sbjct: 269 LHKKDFRGQDLYVSRAQKKNEREEELRRQYEEAKLEKMSKYQGVNLYVKNLDDDMDDDRL 328
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
FS +G + +A+++ D +T SRGFGFV +S + A+ ++G+ + + I V +A
Sbjct: 329 RDEFSVYGVITSAKIMRDEKTNISRGFGFVCFTSPEDATRAVTEMNGRIIGSKPIYVAIA 388
Query: 331 EDRQRRSS 338
+ ++ R S
Sbjct: 389 QRKEVRRS 396
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P A L+VG L V L +F G V V + T RS G+ +V + +AE
Sbjct: 24 PLASASLYVGELDPSVTEAMLFEMFNIIGPVSSIRVCRDAVTRRSLGYAYVNFHRMADAE 83
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE-PGFRIYVGNLPWEVDNARLEQVF 274
+A+E + I GR + R +R P + + I++ NL +D+ L F
Sbjct: 84 RALETLNYSMIKGR-------SCRIMWSQRDPSLRKGNNGNIFIKNLDPSIDHKALHDTF 136
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
S G +++ ++ +D E G S+G+GFV + AI +++G L+ R + V R+
Sbjct: 137 SAFGNILSCKIAHD-EQGNSKGYGFVHYETLEAAESAIKSVNGMLLNDRKVFVGHHISRK 195
Query: 335 RRSS 338
R S
Sbjct: 196 ERES 199
>gi|367038869|ref|XP_003649815.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
gi|346997076|gb|AEO63479.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
Length = 606
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 12/176 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V V+ + T RSRGFGF+T +
Sbjct: 120 EDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVN-- 177
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+ M + +DG+++ +A PR Q + + +I+VG + E + + F++
Sbjct: 178 IVMVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDHEFREYFAQF 229
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G+VV+A ++ D++TGR RGFGFVT SE + +AA + G+ I V A+ R
Sbjct: 230 GRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLAAK--LEIHGKPIEVKKAQPR 283
>gi|406956570|gb|EKD84644.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 64/81 (79%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VG+LPW VD+A+L ++F++ G VV+A+VV DRETGRSRGFGFV MS++ E +A+ L
Sbjct: 1 MFVGSLPWAVDDAKLGEIFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 316 DGQNLDGRAIRVNVAEDRQRR 336
+G +++GR I VN+A R+ R
Sbjct: 61 NGADVEGRKIVVNIARPREDR 81
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 56/78 (71%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+LP+ VD KL +F +AG V A+V+ +RET RSRGFGFV MST EEA+ AV+
Sbjct: 1 MFVGSLPWAVDDAKLGEIFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 222 HRYDIDGRLLTVNKAAPR 239
+ D++GR + VN A PR
Sbjct: 61 NGADVEGRKIVVNIARPR 78
>gi|323307358|gb|EGA60637.1| Hrp1p [Saccharomyces cerevisiae FostersO]
Length = 534
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E K+F+G L +D + L F K GTV +++ + T RSRGFGF++ ++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 216
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V+ H +DG+++ +A PR Q + +I+VG + +V E+ FS+
Sbjct: 217 VKTQHI--LDGKVIDPKRAIPRDEQDKTG--------KIFVGGIGPDVRPKEFEEFFSQW 266
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR--QR 335
G +++A+++ D++TG+SRGFGFVT S + D + + R I + AE R Q+
Sbjct: 267 GTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKFIDFKDRKIEIKRAEPRHMQQ 325
Query: 336 RSS 338
+SS
Sbjct: 326 KSS 328
>gi|312377573|gb|EFR24379.1| hypothetical protein AND_11086 [Anopheles darlingi]
Length = 405
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L F + G V V+ N ET RSRGFGFVT + E ++A
Sbjct: 10 EKGKLFVGGLSWETTHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVDRA 69
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGT-QPERA---PRVFEPGFRIYVGNLPWEVDNARLEQV 273
+E + +DGR + PR +P+R P+VF +G LP + L
Sbjct: 70 LEN-GPHTLDGRTIDPKPCNPRSQHKPKRTGGYPKVF-------LGGLPPNITETDLRSF 121
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F +G V+ ++YD+E +SRGFGF++ +E + A ++ G+ + V AE R
Sbjct: 122 FCRYGNVMEVVIMYDQEKKKSRGFGFLSFENEVAVERATTDHF-VHISGKQVEVKKAEPR 180
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NLP DVD + L LF + G + +V+ + + SR FGFV EEA+KA
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL +A R + R FE G +YV NL +D+
Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 DKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G SRGFGFV + AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVVCD-EHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
>gi|340723465|ref|XP_003400110.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
terrestris]
Length = 443
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L F + G V V+ N E+ RSRGFGFVT S
Sbjct: 11 EKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLV 70
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
++ + +DGR + PR Q P+R+ GF ++++G LP V L F+
Sbjct: 71 LQN-GPHQLDGRTIDPKPCNPRTQQKPKRSG-----GFPKVFLGGLPSNVTETDLRSFFT 124
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
GKV+ ++YD+E +SRGFGF++ E + D A NL+G+ + + AE R
Sbjct: 125 RFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAV-DRCVAEHFVNLNGKQVEIKRAEPR 181
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE----LND 310
+++VG L WE L++ F +G+V++ V+ + E+GRSRGFGFVT S L +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
LDG+ +D + + +R F
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGF 102
>gi|326503644|dbj|BAJ86328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 285
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 102/175 (58%), Gaps = 5/175 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLFVGN+P+ + + LF + G V+ EVI ++ R RGF FVTM+T EEA VE
Sbjct: 80 KLFVGNMPFTFSAAETEKLFAECGVVKDVEVIKMKDG-RKRGFAFVTMATAEEAAAVVEK 138
Query: 221 FHRYDIDGRLLTVN-KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
F +DI+GR++ V + R P +P +++YV NL W+ +A L++ FS+
Sbjct: 139 FDGHDINGRVIKVEFSKSFRKPAPPSSPDTIVAKYKLYVSNLAWKARSADLKEFFSQFNP 198
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
V+A +V+D +S G+GFV+ ++ E A++ L+G+ L R + + ED++
Sbjct: 199 -VSANIVFDDR--KSAGYGFVSFGTKEEAEAALSELNGKELMERPVILRWREDKE 250
>gi|323331635|gb|EGA73049.1| Hrp1p [Saccharomyces cerevisiae AWRI796]
Length = 521
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E K+F+G L +D + L F K GTV +++ + T RSRGFGF++ ++
Sbjct: 144 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 203
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V+ H +DG+++ +A PR Q + +I+VG + +V E+ FS+
Sbjct: 204 VKTQHI--LDGKVIDPKRAIPRDEQDKTG--------KIFVGGIGPDVRPKEFEEFFSQW 253
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR--QR 335
G +++A+++ D++TG+SRGFGFVT S + D + + R I + AE R Q+
Sbjct: 254 GTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKFIDFKDRKIEIKRAEPRHMQQ 312
Query: 336 RSS 338
+SS
Sbjct: 313 KSS 315
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NLP DVD + L LF + G + +V+ + + SR FGFV EEA+KA
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL +A R + R FE G +YV NL +D+
Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 DKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G SRGFGFV + AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVVCD-EHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVGNLP+ + E L +F G +E + + E+ + +GF F+ + + AEKAV
Sbjct: 296 VFVGNLPFSMTKEWLEQIFSWCGDIERVSLPTDWESGKIKGFAFLDFADEDSAEKAVGK- 354
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAP--------------RVFEPGFRIYVGNLPWEVDN 267
+ D +GR L VN + P+ + E ++VGNLPW +
Sbjct: 355 NGEDCEGRDLRVNYSFPKNDNAHSGKGKGGKGKGKGKGHHELGEKSASVFVGNLPWSMTQ 414
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L +VF + G + + DRETG RGF ++ +E A L G +L+GR IRV
Sbjct: 415 EWLSEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAEKAT-KLSGTDLEGRQIRV 473
Query: 328 NVAEDRQ 334
N + R+
Sbjct: 474 NYNQPRE 480
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NLP DVD + L LF + G + +V+ + + SR FGFV EEA+KA
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL +A R + R FE G +YV NL +D+
Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 DKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G SRGFGFV + AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVVCD-EHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
>gi|56758360|gb|AAW27320.1| SJCHGC06322 protein [Schistosoma japonicum]
Length = 721
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 13/186 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+V N P + D+EKL +F + G ++ A V+ + E +S+GFGFV + AE AV
Sbjct: 194 LYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNE-GKSKGFGFVCYLDPDHAENAVRTM 252
Query: 222 HRYDIDGRLLTVNKAAPR---------GTQPERAPRV--FEPGFRIYVGNLPWEVDNARL 270
H +I+GR+L +A + + +RA R + +YV NL +D+ RL
Sbjct: 253 HGKEIEGRVLYCARAQRKEERQEELKQKIEKQRAERQSNYMLNVNLYVKNLDDNIDDKRL 312
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
E+ FS HG + +A+V+ D RS+GFGFV ++ + A+ ++G + + + V +A
Sbjct: 313 EEAFSVHGSITSAKVMKD-ANNRSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALA 371
Query: 331 EDRQRR 336
+ ++ R
Sbjct: 372 QRKEDR 377
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 6/176 (3%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL ++ ++L F G + +++ + E +S+G+GFV E AE+A+E
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMD-ENGQSKGYGFVHFEKEECAERAIEKI 161
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRV-FEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ I R++ V K P+ + +A +V F +YV N P E DN +L+++FSE G++
Sbjct: 162 NNMIIRDRVVYVGKFIPKTERKSQARKVKFN---NLYVKNFPPETDNEKLKEMFSEFGEI 218
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+A V+ D E G+S+GFGFV +A+ + G+ ++GR + A+ ++ R
Sbjct: 219 KSACVMKDNE-GKSKGFGFVCYLDPDHAENAVRTMHGKEIEGRVLYCARAQRKEER 273
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
++ L+VG+L V L F + G V A V + T +S G+G+V + AE+A+
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAEQAL 71
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEH 277
E+ + + GR + R +R P + + G I++ NL ++ L FS
Sbjct: 72 EVLNYEPLMGRPI-------RIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFF 124
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
G++++ ++V D E G+S+G+GFV E AI ++ + R + V
Sbjct: 125 GRILSCKIVMD-ENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYV 173
>gi|226499642|ref|NP_001147738.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|195613392|gb|ACG28526.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|414585685|tpg|DAA36256.1| TPA: plastid-specific 30S ribosomal protein 2 [Zea mays]
Length = 272
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 7/170 (4%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KL+V NLP+ + ++ LF + GTV+ EVI ++ R+RGF FVTMST EEA A +
Sbjct: 67 KLYVANLPWSFPAPEIEKLFAQHGTVKDVEVIKGKD-GRNRGFAFVTMSTAEEAAAAADK 125
Query: 221 FHRYDIDGRLLTV--NKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
+ +D+ GR + V +K+ R P + E ++YV NLPW+ +++ F+
Sbjct: 126 LNSHDVMGRTIKVEFSKSFRRPAPPPPPGTIIE-RHKLYVSNLPWKARAPNVKEFFANFN 184
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
++A V++D G++ G+GFV+ ++ E A+ LDG+ L GR +R+N
Sbjct: 185 P-LSANVIFD--NGKAAGYGFVSFGTKEEAEAALTELDGKELLGRPVRLN 231
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YV NLPW +E++F++HG V + V+ ++ GR+RGF FVTMS+ E A
Sbjct: 67 KLYVANLPWSFPAPEIEKLFAQHGTVKDVEVIKGKD-GRNRGFAFVTMSTAEEAAAAADK 125
Query: 315 LDGQNLDGRAIRVNVAEDRQR 335
L+ ++ GR I+V ++ +R
Sbjct: 126 LNSHDVMGRTIKVEFSKSFRR 146
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 12/186 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LFVGNL ++VD E L FE G + ++ +R++ RSRGFG+V +A KA
Sbjct: 302 ANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADAAKAYN 361
Query: 220 MFHRYDIDGRLLTVNKAAPR-----GTQPERAPRVFEPGFR-------IYVGNLPWEVDN 267
+IDGR + ++ A R Q R G + ++VGN+P+ +
Sbjct: 362 AKKDTEIDGRKINLDYATGRPANNNNNQDRAQARARNFGDQTSPESDTLFVGNIPFSANE 421
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+ ++F + G +V R+ D E+GR +GFG+V SS E A L+G L+GR +R+
Sbjct: 422 DSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDLNGAELNGRPVRL 481
Query: 328 NVAEDR 333
+ + R
Sbjct: 482 DFSTPR 487
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG L W D++ L+Q F+ G+V A V+ DRETGRSRGFGFV+ S E N+AI
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 315 LDGQNLDGRAIRVNVAEDRQR--RSSF 339
+DG+ L+GR IRVN+A +R RSSF
Sbjct: 96 MDGKELNGRQIRVNLATERSSAPRSSF 122
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+KLFVG L + D L F G V A VI +RET RSRGFGFV+ S + A A++
Sbjct: 35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQP 243
+++GR + VN A R + P
Sbjct: 95 EMDGKELNGRQIRVNLATERSSAP 118
>gi|29336045|ref|NP_444344.1| polyadenylate-binding protein 5 [Mus musculus]
gi|26341316|dbj|BAC34320.1| unnamed protein product [Mus musculus]
gi|76827669|gb|AAI07363.1| Poly(A) binding protein, cytoplasmic 5 [Mus musculus]
gi|76828194|gb|AAI07364.1| Poly(A) binding protein, cytoplasmic 5 [Mus musculus]
gi|148701502|gb|EDL33449.1| poly A binding protein, cytoplasmic 5 [Mus musculus]
Length = 381
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 13/184 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV N D+D EKL LF + G E +VI + T +S+GFGFV T E A+KAV
Sbjct: 200 VFVKNFGDDIDDEKLNKLFSEYGPTESVKVIRD-ATGKSKGFGFVRYETHEAAQKAVLEL 258
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
H IDG++L V +A + + R FE G IY+ NL +++ +L+
Sbjct: 259 HGKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKEKNRPSGVPIYIKNLDETINDEKLK 318
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + A+V+ E G+ +GFG V SS E A+ ++G+ + + + V + +
Sbjct: 319 EEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEACKAVDEMNGRIIGSKTLHVTLGQ 376
Query: 332 DRQR 335
R R
Sbjct: 377 ARHR 380
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D+ L LF G + +V+ + + S+G+ +V ++ A +A+
Sbjct: 107 IFIKNLDKTIDNRALFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFDSLAAANRAIWHM 164
Query: 222 HRYDIDGRLLTVNKAA-PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ ++ R + V + P E R ++V N ++D+ +L ++FSE+G
Sbjct: 165 NGVRLNNRQVYVGRFKFPEERAAEVRTRERATFTNVFVKNFGDDIDDEKLNKLFSEYGPT 224
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+ +V+ D TG+S+GFGFV + A+ L G+++DG+ + V A+ + R
Sbjct: 225 ESVKVIRD-ATGKSKGFGFVRYETHEAAQKAVLELHGKSIDGKVLCVGRAQKKIER 279
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 164 VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHR 223
VG+L DV + L F AG + + + T G+G+V +AE A+ +
Sbjct: 21 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 80
Query: 224 YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNA 283
I+G+ + +QP+ R G I++ NL +DN L +FS G +++
Sbjct: 81 DLINGKPFRL-----MWSQPDDRLRKSGVG-NIFIKNLDKTIDNRALFYLFSAFGNILSC 134
Query: 284 RVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+VV D + G S+G+ +V S N AI ++G L+ R + V
Sbjct: 135 KVVCD-DNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV 176
>gi|356501604|ref|XP_003519614.1| PREDICTED: uncharacterized protein LOC100814628 [Glycine max]
Length = 477
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 90/186 (48%), Gaps = 25/186 (13%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLF+G + +D D E+L F K G V A ++ +R T R+RGFGFV + AE+ +
Sbjct: 6 GKLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVI- 64
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQ---------------PERAPRVFEPGFRIYVGNLPWE 264
++ IDGR + KA PR Q P R ++F VG LP
Sbjct: 65 -MDKHIIDGRTVEAKKAVPRDDQQTINRQTGSIHGSPSPGRTKKIF-------VGGLPST 116
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
+ + ++ F + G + + V+YD T R RGFGF+T SE E D + L+G+
Sbjct: 117 ITESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSE-EAVDRVLYKTFHELNGKM 175
Query: 325 IRVNVA 330
+ V A
Sbjct: 176 VEVKRA 181
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G + W+ D+ RL++ F ++G+V+ A ++ DR TGR+RGFGFV + + I
Sbjct: 7 KLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVI-- 64
Query: 315 LDGQNLDGRAIRVNVAEDR 333
+D +DGR + A R
Sbjct: 65 MDKHIIDGRTVEAKKAVPR 83
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
P K+FVG LP + F++ GT+ V+Y+ T R RGFGF+T + E
Sbjct: 101 SPGRTKKIFVGGLPSTITESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAV 160
Query: 215 EKAV-EMFHRYDIDGRLLTVNKAAPR--GTQPERAPRV 249
++ + + FH +++G+++ V +A P+ P R+P +
Sbjct: 161 DRVLYKTFH--ELNGKMVEVKRAVPKELSPGPTRSPLI 196
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 61/84 (72%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P ++++G + + D L + FS++G+VV+AR++ DRETGRSRGFGF+T +S E + A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 312 IAALDGQNLDGRAIRVNVAEDRQR 335
I ALDGQ+L GR IRVN A +R R
Sbjct: 100 IQALDGQDLHGRPIRVNYANERPR 123
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%)
Query: 148 FEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVT 207
F+ + KLF+G + Y D + L F K G V A +I +RET RSRGFGF+T
Sbjct: 30 FQAIRCMSSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFIT 89
Query: 208 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 239
++VEEA A++ D+ GR + VN A R
Sbjct: 90 YTSVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|224126191|ref|XP_002329613.1| predicted protein [Populus trichocarpa]
gi|222870352|gb|EEF07483.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 6/171 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLFVG + ++ E F K G V + ++ +R + R RGFGFVT + A++ +E
Sbjct: 1 KLFVGGVSWETTEETFTNYFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPVVADRVLEE 60
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
H IDGR + V + PR R R +I+VG +P + L++ FS +G +
Sbjct: 61 DHV--IDGRAVEVKRTVPREDMEVRVTRTK----KIFVGGIPPSLTEDELKEYFSVYGSI 114
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
V+ +++ D +TGRSRGFGFVT SE + + L G+ + + AE
Sbjct: 115 VDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRTHELGGKQVGYSSAE 165
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG L W D++ L+Q F+ G+V A V+ DRETGRSRGFGFV+ S E N+AI
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 315 LDGQNLDGRAIRVNVAEDRQR--RSSF 339
+DG+ L+GR IRVN+A +R RSSF
Sbjct: 96 MDGKELNGRQIRVNLATERSSAPRSSF 122
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+KLFVG L + D L F G V A VI +RET RSRGFGFV+ S + A A++
Sbjct: 35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQP 243
+++GR + VN A R + P
Sbjct: 95 EMDGKELNGRQIRVNLATERSSAP 118
>gi|6715645|gb|AAF26472.1|AC007323_13 T25K16.8 [Arabidopsis thaliana]
Length = 679
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 20/193 (10%)
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVI-YNRETDR 199
E ++ V + E V+ P +L+V N+P D +L +F+ GTV EV+ N +T
Sbjct: 445 EPNKDSVVSKAEPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVVSRNPQTGE 504
Query: 200 SRGFGFVTMSTVEEAEKAVEMF---------HRYDIDGRLLTVNKAAPRGTQPERAPRV- 249
SRG G+VTM ++ A+ A+ + ++ GR + V + R P V
Sbjct: 505 SRGSGYVTMGSINSAKIAIASLDGTVRARETKKQEVGGREMRVRYSVDMNPGTRRNPEVL 564
Query: 250 ---------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 300
+E ++YVGNLPW L FS+ G +V+ RV++DR+TGR+R F F+
Sbjct: 565 NSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFL 624
Query: 301 TMSSETELNDAIA 313
+ +S E + A++
Sbjct: 625 SFTSGEERDAALS 637
>gi|350406107|ref|XP_003487656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
impatiens]
Length = 426
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L F + G V V+ N E+ RSRGFGFVT S
Sbjct: 11 EKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLV 70
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
++ + +DGR + PR Q P+R+ GF ++++G LP V L F+
Sbjct: 71 LQN-GPHQLDGRTIDPKPCNPRTQQKPKRSG-----GFPKVFLGGLPSNVTETDLRSFFT 124
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
GKV+ ++YD+E +SRGFGF++ E + D A NL+G+ + + AE R
Sbjct: 125 RFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAV-DRCVAEHFVNLNGKQVEIKRAEPR 181
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE----LND 310
+++VG L WE L++ F +G+V++ V+ + E+GRSRGFGFVT S L +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
LDG+ +D + + +R F
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGF 102
>gi|242082447|ref|XP_002445992.1| hypothetical protein SORBIDRAFT_07g029220 [Sorghum bicolor]
gi|241942342|gb|EES15487.1| hypothetical protein SORBIDRAFT_07g029220 [Sorghum bicolor]
Length = 266
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 103/181 (56%), Gaps = 6/181 (3%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEV-IYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+L N+P+D ++++ LF+ G+V E+ +Y+ ++RG FVTM + E+A A+
Sbjct: 73 RLVAQNIPWDSTADEMRALFQTHGSVVGVELSMYS--ASKNRGLAFVTMGSEEDALAALT 130
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--GFRIYVGNLPWEVDNARLEQVFSEH 277
+ ++ R + V+ A PR QP++ V P + ++VGNL W V N L ++F+
Sbjct: 131 HLNSTILNDRKIKVDFARPRKKQPKQPVVVSNPMEKYIVFVGNLTWRVRNRHLRELFASA 190
Query: 278 GKVVNARVVYDRETG-RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
V++A V++ T RS G+ FV+ SS+ AI+A +G+ L GR I V + ++ ++
Sbjct: 191 PGVISAEVIFHTTTPRRSAGYAFVSFSSKETAEAAISAFNGKILMGRPINVMLKDENGKK 250
Query: 337 S 337
+
Sbjct: 251 N 251
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETD-RSRGFGFVTMSTVEEA 214
P E +FVGNL + V + L LF A V AEVI++ T RS G+ FV+ S+ E A
Sbjct: 163 PMEKYIVFVGNLTWRVRNRHLRELFASAPGVISAEVIFHTTTPRRSAGYAFVSFSSKETA 222
Query: 215 EKAVEMFHRYDIDGRLLTV 233
E A+ F+ + GR + V
Sbjct: 223 EAAISAFNGKILMGRPINV 241
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARV-VYDRETGRSRGFGFVTMSSETELND 310
P R+ N+PW+ + +F HG VV + +Y ++RG FVTM SE +
Sbjct: 70 PRTRLVAQNIPWDSTADEMRALFQTHGSVVGVELSMYS--ASKNRGLAFVTMGSEEDALA 127
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQRR 336
A+ L+ L+ R I+V+ A R+++
Sbjct: 128 ALTHLNSTILNDRKIKVDFARPRKKQ 153
>gi|406959178|gb|EKD86596.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 64/81 (79%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
++VG+LPW VD+A+L ++F++ G VV+A+VV DRETGRSRGFGFV MS++ E +A+ L
Sbjct: 1 MFVGSLPWAVDDAKLAELFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 316 DGQNLDGRAIRVNVAEDRQRR 336
+G +++GR I VN+A R+ R
Sbjct: 61 NGTDVEGRKIVVNIARPREDR 81
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+LP+ VD KLA LF +AG V A+V+ +RET RSRGFGFV MST EEA+ AV+
Sbjct: 1 MFVGSLPWAVDDAKLAELFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 222 HRYDIDGRLLTVNKAAPR 239
+ D++GR + VN A PR
Sbjct: 61 NGTDVEGRKIVVNIARPR 78
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NLP DVD + L LF + G + +V+ + + RSR FGFV EEA+KA
Sbjct: 189 EFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRD-NSGRSRCFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL ++A R + R FE G +YV NL +D+
Sbjct: 248 VVHMNGKEVSGRLLYASRAQKRVERQNELKRKFEQMKQDRLSRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 DKLRKEFSPYGVITSAKVM--TEGSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG++ V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +V D+ SRGFGFV + AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVACDKHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 RSS 338
R++
Sbjct: 179 RAA 181
>gi|148909135|gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+F+G L S F K G + + ++ +R T + RGFGFVT + +K ++
Sbjct: 42 GKIFIGGLSRSTTSSAFTKHFSKYGELTDSVIMKDRLTGQPRGFGFVTYADPSVIDKVIQ 101
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H +DG+ + + + PRG +AP+ +++VG +P + + FS+ GK
Sbjct: 102 DKHI--LDGKTVEIKRTIPRGNS-SKAPKT----KKVFVGGIPTSITEDEFKDYFSKFGK 154
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
VV +++ DR TGRSRGFGF+T +E + + I+ L G+ + + AE ++
Sbjct: 155 VVEHQIMQDRNTGRSRGFGFITFETEQAVEEIISQGRMLELGGKQVEIKKAEPKK 209
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P+ K+FVG +P + ++ F K G V +++ +R T RSRGFGF+T T + E+
Sbjct: 126 PKTKKVFVGGIPTSITEDEFKDYFSKFGKVVEHQIMQDRNTGRSRGFGFITFETEQAVEE 185
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 247
+ ++ G+ + + KA P+ P+ P
Sbjct: 186 IISQGRMLELGGKQVEIKKAEPKKPLPDAGP 216
>gi|224286903|gb|ACN41154.1| unknown [Picea sitchensis]
Length = 446
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 96/168 (57%), Gaps = 7/168 (4%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P KLFV L +D ++E L LF + G +E VI ++ T +S+G+GFVT ++ A
Sbjct: 61 PAQRKLFVRGLGWDTNTESLKALFSQFGELEEGVVIMDKNTGKSKGYGFVTFKHMDGALN 120
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
A++ + IDGR +TV++ A G+QP + P +IYVGN+P ++ RL +FS+
Sbjct: 121 ALKEPSK-KIDGR-MTVSQLASAGSQPAQ-PAADVSARKIYVGNVPMDMAADRLLSLFSQ 177
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSS----ETELNDAIAALDGQNL 320
+G++ + +D+++G+SRGF S + L + + +DG +
Sbjct: 178 YGEIEEGPLGFDKQSGKSRGFALFIFKSVDATKRALEEPMKTIDGHQM 225
>gi|67471742|ref|XP_651783.1| enhancer binding protein-1 [Entamoeba histolytica HM-1:IMSS]
gi|56468563|gb|EAL46397.1| enhancer binding protein-1 [Entamoeba histolytica HM-1:IMSS]
gi|449709038|gb|EMD48384.1| enhancer binding protein, putative [Entamoeba histolytica KU27]
Length = 306
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 101/186 (54%), Gaps = 12/186 (6%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE---TDRSRGFGFVTMSTVEEAE 215
D LF+ NLP+ + EKL +F K G VEI + +R+ ++ G F+T+ T EE +
Sbjct: 112 DNMLFIKNLPFAITEEKLKEMFSKFGVVEITLIKTHRKKGNVTKNNGIAFITVKTAEEQK 171
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG----FRIYVGNLPWEVDNARLE 271
KA+ + ++++GR +TV A + + + EP ++V NLP+ + + +
Sbjct: 172 KAIAEMNNFEVEGRKITVAAAYKKVENKQTTKKTNEPKSLSETNVFVKNLPFTLTDEGFK 231
Query: 272 QVFSEHGKVVNARVV--YDRETG--RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
++F ++ VV A +V ++++ RS+G+GFVT + + AIA +D ++GR I V
Sbjct: 232 KLFEKYD-VVEATIVKRHNKKLNVDRSKGYGFVTFKTAEQQKKAIAEMDNFEVEGRKITV 290
Query: 328 NVAEDR 333
A R
Sbjct: 291 TSAYQR 296
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 30/194 (15%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+V +L Y + E + F+ E+ I + SRGF F+ +T +EAEKA+EM
Sbjct: 4 LYVSHLDYSLKVEDVQNAFKTYNPKEVK--IISTPIGYSRGFAFIEFATPQEAEKALEM- 60
Query: 222 HRYDIDGRLLTVNKAAPR-GTQPERAPRVFEPGFR---------------------IYVG 259
R+ I + V KA P+ T ER ++ GF+ +++
Sbjct: 61 DRHTIGKMEIKVQKALPKEETTTER--KMNRRGFKGKRNTRKRHLVKRTNEVTDNMLFIK 118
Query: 260 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETG---RSRGFGFVTMSSETELNDAIAALD 316
NLP+ + +L+++FS+ G V + R+ G ++ G F+T+ + E AIA ++
Sbjct: 119 NLPFAITEEKLKEMFSKFGVVEITLIKTHRKKGNVTKNNGIAFITVKTAEEQKKAIAEMN 178
Query: 317 GQNLDGRAIRVNVA 330
++GR I V A
Sbjct: 179 NFEVEGRKITVAAA 192
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVI--YNRE--TDRSRGFGFVTMSTVEEAEKA 217
+FV NLP+ + E LFEK VE A ++ +N++ DRS+G+GFVT T E+ +KA
Sbjct: 216 VFVKNLPFTLTDEGFKKLFEKYDVVE-ATIVKRHNKKLNVDRSKGYGFVTFKTAEQQKKA 274
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPE 244
+ ++++GR +TV A R + E
Sbjct: 275 IAEMDNFEVEGRKITVTSAYQRAEKKE 301
>gi|195024447|ref|XP_001985876.1| GH21052 [Drosophila grimshawi]
gi|193901876|gb|EDW00743.1| GH21052 [Drosophila grimshawi]
Length = 645
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 105/196 (53%), Gaps = 17/196 (8%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E AKLF + N + D EKL FE G + +V+ +++ +S+GFGFV T E
Sbjct: 177 EKAKLFTNVYIKNFTDEFDDEKLKENFEPYGKITSYKVM-SKDDGKSKGFGFVAYETTEA 235
Query: 214 AEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLP 262
AE AV+ + D+ +G+ L V +A + + + R FE G +YV NL
Sbjct: 236 AEAAVQALNGKDMGEGKTLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLD 295
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+D+ RL + FS +G + +A+V+ D E GRS+GFGFV S E A+ L+G+ +
Sbjct: 296 DSIDDERLRKEFSLYGTITSAKVMTDEE-GRSKGFGFVCFISPNEATCAVTELNGRVVGS 354
Query: 323 RAIRVNVAEDRQRRSS 338
+ + V +A+ ++ R +
Sbjct: 355 KPLYVALAQRKEERKA 370
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L D++ L F AG V V + T RS G+ +V +AE+A++
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD 61
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ +D+ V R +R P + G +++ NL +DN + FS G
Sbjct: 62 TMN-FDL------VRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +V D E G S+G+GFV +E N +I ++G L+G+ + V R+ R
Sbjct: 115 NILSCKVATD-EKGHSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKER 171
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 5/181 (2%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRS-RGFGFVTMSTVE 212
E P A L+VGNL V L +F AG V+ ++I +R +GFV +
Sbjct: 7 AEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMR 66
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
AE A++ + I + VN A T E F ++VG+L EV++A L +
Sbjct: 67 AAETALQTLNGRKIFDTEIRVNWAYQGSTAKEDT----SGHFHVFVGDLSPEVNDAVLAK 122
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
FS G + +ARV++D +G+SRG+GF+ +T+ AIA ++G+ L RAIRVN A
Sbjct: 123 AFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 182
Query: 333 R 333
+
Sbjct: 183 K 183
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +V+ LA F GT+ A V+++ + +SRG+GF+ +AE+A+
Sbjct: 106 VFVGDLSPEVNDAVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 165
Query: 222 HRYDIDGRLLTVNKA--------APRGTQPERAPRVFE---------------PGFR--I 256
+ + R + VN A APR T AP P + +
Sbjct: 166 NGEWLGSRAIRVNWANQKTQGAPAPRPTGAGGAPAPINFQGGPLSYETVVQQTPAYNTTV 225
Query: 257 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 316
YVGNL A L +F G + R+ DR GF FV + + AI L
Sbjct: 226 YVGNLVPYCTQADLIPLFQSIGYLSEIRMQADR------GFAFVKLDTHENAAMAIVQLQ 279
Query: 317 GQNLDGRAIRVNVAEDR 333
GQ + GR I+ + +DR
Sbjct: 280 GQMVHGRPIKCSWGKDR 296
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 5/169 (2%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VGNL V + +A LF + G+V +VI++ D + FV S +A +A++
Sbjct: 44 LYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHDGANDP---YAFVEFSDHGQASQALQTM 100
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
++ + R + VN A G QP + F ++VG+L EVDN +L + F G V
Sbjct: 101 NKRLLHDREMKVNWAVEPGQQPSKIDTTRH--FHVFVGDLSSEVDNQKLREAFIPFGDVS 158
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+A+V+ D T +S+G+GFV+ E AI ++GQ L R IR N A
Sbjct: 159 DAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWA 207
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +VD++KL F G V A+VI + T +S+G+GFV+ EEAE+A+E
Sbjct: 133 VFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 192
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF------------RIYVGNLPWEVDNAR 269
+ + R + N A + E+ E + +YVGN+ +
Sbjct: 193 NGQWLGRRTIRTNWATRKPGDQEKPSNYNEKSYDEVYNQTSGDNTSVYVGNIA-NLTEDE 251
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+ Q F+ +G++ R+ + +G+ FV ++ AI ++ Q++ G+ +R
Sbjct: 252 IRQAFASYGRISEVRIF------KMQGYAFVKFENKNAAAKAITEMNNQDVGGQMVRC 303
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 93/185 (50%), Gaps = 15/185 (8%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L F + G V V+ N E+ RSRGFGFVT S
Sbjct: 11 EKGKLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLV 70
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
++ + +DGR + PR Q P+R+ GF ++++G LP V L F
Sbjct: 71 LQN-GPHQLDGRTIDPKPCNPRTLQKPKRS-----GGFPKVFLGGLPSNVTETDLRSFFQ 124
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ---NLDGRAIRVNVAED 332
GKV+ ++YD+E +SRGFGF++ E DA+ G+ NL+G+ + + AE
Sbjct: 125 RFGKVMEVVIMYDQEKKKSRGFGFLSFEDE----DAVDRCVGEHFVNLNGKQVEIKRAEP 180
Query: 333 RQRRS 337
R S
Sbjct: 181 RDSSS 185
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE----LND 310
+++VG L WE L++ FS +G+V++ V+ + E+GRSRGFGFVT S + L +
Sbjct: 14 KLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQN 73
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
LDG+ +D + + +R F
Sbjct: 74 GPHQLDGRTIDPKPCNPRTLQKPKRSGGF 102
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VGNL V E L LF + GTV+ ++I RET F F+ + + A+ A+
Sbjct: 10 LYVGNLDTSVTEELLCTLFSQMGTVKSCKII--RETSIDP-FAFIEYANHQSAQTALAAM 66
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
++ + + VN A G QP+ I+VG+L E+D L + F+ G++
Sbjct: 67 NKRMFLKKEIRVNWATSAGNQPKTDTSQHH---HIFVGDLSPEIDTETLREAFAPFGEIS 123
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
N R+V D +T +SRG+ FV+ + E +AIA ++GQ L R+IR N
Sbjct: 124 NCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTN 170
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L ++D+E L F G + ++ + +T +SRG+ FV+ EAE A+ M
Sbjct: 98 IFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMM 157
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----PGFR------------IYVGNLPWE- 264
+ + R + N + + P + + PGF +Y G P
Sbjct: 158 NGQWLGSRSIRTNWSTRKPPAPRENSKGIKSGKTPGFEEIYNNTSPTNTTVYCGGFPPNA 217
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
+ + +++ F++ G + + RV D +G+ F+ +S+ AI + G
Sbjct: 218 ITDELIQKHFAQFGHINDTRVFKD------KGYAFIRFASKESAARAIEGTHNSEVQGHP 271
Query: 325 IRV 327
++
Sbjct: 272 VKC 274
>gi|388582290|gb|EIM22595.1| polyadenylate binding protein [Wallemia sebi CBS 633.66]
Length = 637
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL VD EK + E G + ++ V+ E SRGFGFV EEA KAVE
Sbjct: 221 VFIKNLDVSVDDEKFKQILEPYGEI-LSAVVQKDEQGNSRGFGFVNYKNHEEAAKAVESL 279
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ ++DG+ + +A + + E R +E G +YV NL + D+ RL
Sbjct: 280 NEVEVDGKKIFAARAQKKNEREEELRRNYEQAKLEKLAKYAGVNLYVKNLDDDFDDERLV 339
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F G + +A+++ D E G S+GFGFV SS E A++ L G+ + + + V++A+
Sbjct: 340 GEFEPFGTITSAKIMRD-EKGTSKGFGFVCFSSPDEATKAVSELSGKMIGSKPLYVSLAQ 398
Query: 332 DRQRR 336
R R
Sbjct: 399 RRDVR 403
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 9/183 (4%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P+ A L+VG L V L +F G V V + T RS G+ +V +++ E+
Sbjct: 35 PQSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNLQDGER 94
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFS 275
A+E + I R A R +R P + + G I++ NL +DN L F+
Sbjct: 95 ALEQLNYSLIKNR-------ACRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFA 147
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G V++ +V D E G SRG+GFV + + AI ++G L+ + + V ++
Sbjct: 148 AFGNVLSCKVATD-ENGNSRGYGFVHYENGESASAAIQHVNGMLLNDKKVYVGHHVSKKE 206
Query: 336 RSS 338
R +
Sbjct: 207 RQA 209
>gi|301763992|ref|XP_002917400.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 611
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NL DVD + L LF + G + +V+ + + SRGFGFV EEA+KA
Sbjct: 189 EFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRD-DIGHSRGFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL V +A R + R FE G +YV NL +D+
Sbjct: 248 VMDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 EKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEVIKGQPVRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D SRGFGFV + + AIA ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVVCDDHG--SRGFGFVHFETHEAAHQAIATMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 252 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 309 NDAIAALDGQNLDGRAIRV 327
A+ ++ + + G+ +R+
Sbjct: 66 ERALDTMNFEVIKGQPVRI 84
>gi|388503916|gb|AFK40024.1| unknown [Medicago truncatula]
Length = 324
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 101/179 (56%), Gaps = 4/179 (2%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L V NLP+ + + LF + GTV E+I +++ + +G+ FVTM + E A+ AV+ F
Sbjct: 98 LIVFNLPWSLSKPDIKDLFGQCGTVIDVEIIKSKD-GKGKGYTFVTMDSGEGAQAAVDKF 156
Query: 222 HRYDIDGRLLTVN--KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
+ +I GR+L V K + P AP E + IY NL W+ + L +F+E+ K
Sbjct: 157 NATEISGRILRVEFAKGFKKPRPPPPAPTPKEARYVIYASNLAWKARSTHLRDIFTENFK 216
Query: 280 V-VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
V+ARVV+ G+S G+GFV+ +E E AI AL G+ L GR + V ++E + + +
Sbjct: 217 TPVSARVVFQVPGGKSAGYGFVSYHTEEEAEAAIFALQGKELLGRPLLVKISERKVKEA 275
>gi|395526571|ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 20/211 (9%)
Query: 138 RQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRET 197
R+E E G + +EF +++ N D+D E+L LF K G +V+ + +
Sbjct: 176 RKEREAELGA-KAKEFTN------VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-SS 227
Query: 198 DRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE------ 251
+S+GFGFV+ E+A KAVE + DI+G+++ V +A + + R FE
Sbjct: 228 GKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQER 287
Query: 252 ----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 307
G +Y+ NL +D+ +L + FS G + +A+V+ E GRS+GFGFV SS E
Sbjct: 288 ISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSSPDE 345
Query: 308 LNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
A+ ++G+ + + + V +A+ ++ R +
Sbjct: 346 ATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG V V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHSDVTE---AMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + + +R P + + G +++ NL +DN L FS
Sbjct: 68 ALDTMNFDVIKGKPIRIMWS-------QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G S+G+ FV ++ + AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-ENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
ERQ E + ++E + + L++ NL +D EKL F G++ A+V+ E
Sbjct: 271 ERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--E 328
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 231
RS+GFGFV S+ +EA KAV +++GR++
Sbjct: 329 DGRSKGFGFVCFSSPDEATKAVT-----EMNGRIV 358
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L +V A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D G+ IR+
Sbjct: 66 ERALDTMNFDVIKGKPIRI 84
>gi|380017405|ref|XP_003692647.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
florea]
Length = 439
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L F + G V V+ N E+ RSRGFGFVT S
Sbjct: 11 EKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLV 70
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
++ + +DGR + PR Q P+R+ GF ++++G LP V L F+
Sbjct: 71 LQN-GPHQLDGRTIDPKPCNPRTQQKPKRSG-----GFPKVFLGGLPSNVTETDLRSFFT 124
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
GKV+ ++YD+E +SRGFGF++ E + D A NL+G+ + + AE R
Sbjct: 125 RFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAV-DRCVAEHFVNLNGKQVEIKRAEPR 181
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE----LND 310
+++VG L WE L++ F +G+V++ V+ + E+GRSRGFGFVT S L +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
LDG+ +D + + +R F
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGF 102
>gi|449437591|ref|XP_004136575.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Cucumis sativus]
gi|449501907|ref|XP_004161491.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Cucumis sativus]
Length = 335
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P + KLFV L ++ SE L F G +E VIY++ T +SRG+GF+T +E +
Sbjct: 62 PVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKA 121
Query: 217 AVEMFHRYDIDGRLLTVNKAA----PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
A++ + I+GR+ N A T P+ A R ++Y+G L ++ + L
Sbjct: 122 ALKAPSKI-IEGRMAVCNLACEGLSGSSTTPDLAQR------KLYIGGLSPDITSEVLLN 174
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
F +G + V YD++T SRGFGFVT ++ AI D + GR I V +A+
Sbjct: 175 FFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPD-KTFGGRNIIVKLADS 233
Query: 333 RQRR 336
+ +
Sbjct: 234 HRNK 237
>gi|365758528|gb|EHN00365.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 539
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E K+F+G L +D + L F K GTV +++ + T RSRGFGF++ ++
Sbjct: 160 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 219
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V+ H +DG+++ +A PR Q + +I+VG + +V E+ FS+
Sbjct: 220 VKTQHI--LDGKVIDPKRAIPRDEQDKTG--------KIFVGGIGPDVRPKEFEEFFSQW 269
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR--QR 335
G +++A+++ D++TG+SRGFGFVT S + D + + R I + AE R Q+
Sbjct: 270 GTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKFIDFKDRKIEIKRAEPRHMQQ 328
Query: 336 RSS 338
+SS
Sbjct: 329 KSS 331
>gi|363748813|ref|XP_003644624.1| hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888257|gb|AET37807.1| Hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
Length = 541
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+F+G L ++ + L F K GTV +++ + T RSRGFGF++ + ++ V+
Sbjct: 172 KMFIGGLNWETTEDNLREYFSKYGTVTEVKIMRDGTTGRSRGFGFLSFADASSVDEVVKT 231
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
H +DG+++ +A PR Q + +I+VG + +V E+ FSE G +
Sbjct: 232 QHI--LDGKVIDPKRAIPREEQDKTG--------KIFVGGIGPDVRPKEFEEFFSEWGSI 281
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
++A+++ D++TGRSRGFGF+T S + D + G+ I + AE RQ
Sbjct: 282 IDAQLMLDKDTGRSRGFGFITYDSPDAV-DRVCQNKFIEFKGKRIEIKRAEPRQ 334
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + DV ++ F + G++ A+++ +++T RSRGFGF+T + + ++ +
Sbjct: 255 GKIFVGGIGPDVRPKEFEEFFSEWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAVDRVCQ 314
Query: 220 MFHRY-DIDGRLLTVNKAAPRGTQPER 245
+++ + G+ + + +A PR Q +R
Sbjct: 315 --NKFIEFKGKRIEIKRAEPRQVQKQR 339
>gi|38345560|emb|CAE03434.2| OSJNBa0032F06.17 [Oryza sativa Japonica Group]
Length = 924
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
++ L+VGNLP V S KL LF G + + V+ + T S+G+GFV S A +A
Sbjct: 207 DNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEA 266
Query: 218 VEMFHRYDIDGRLLTVNKAA-PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + ++G L V P + P ++YV NL ++ RL +F
Sbjct: 267 IKRMNGRLVEGTALKVRVTGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLP 326
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
G+V NA+V D TG S+G+GFV SS +A+ L+G+ +DGR I V V+
Sbjct: 327 FGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVS 380
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 19/190 (10%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
AKL+V NL +++++L LF G V A+V + T S+G+GFV S+ A +AV
Sbjct: 304 AKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVI 363
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPE---------RAPRVFEPGF----------RIYVGN 260
+ +DGR + V + T P R V P +YV N
Sbjct: 364 HLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCN 423
Query: 261 LPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL 320
+P +D +L ++F GK+ +ARVV D +T ++G+GF+ + AIAA++G +
Sbjct: 424 MPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALV 483
Query: 321 DGRAIRVNVA 330
G I V VA
Sbjct: 484 GGEMIIVRVA 493
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG +P + ++ LF G V A + R + +G V A A++
Sbjct: 602 ANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF------RFQRYGMVRFDNPSCAAAAID 655
Query: 220 MFHRYDIDGRLLTVNKA-------APRGTQPERAPRVFEPG----FRIYVGNLPWEVDNA 268
Y I G +L V A A +G + E G +YV +LP V+N
Sbjct: 656 HLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSS-NEQGQIDMTNLYVSHLPSYVNNE 714
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
RL +F G++ A+VV +R TG S+GFGFV + A+ ++G LDG + V
Sbjct: 715 RLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVR 774
Query: 329 VA 330
+A
Sbjct: 775 IA 776
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+ L+V N+P +D++KL LF G + A V+ + +T ++G+GF+ + E A KA+
Sbjct: 417 SNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIA 476
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP-----GFRIYVGNLPWEVDNARLEQVF 274
+ + G ++ V A G P + + R+Y+ NLP + ++ +F
Sbjct: 477 AMNGALVGGEMIIVRVA---GLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLF 533
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ G++ +V+ + E + V + A+ +DG ++G+ + V +E
Sbjct: 534 APFGQIT--KVLMNLE------YSLVWYADAPSATKAVQHMDGYMVEGKRLVVKRSE 582
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 231 LTVNKAAPRGTQPERAPRVFEPG----FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV 286
L + A G +P VF +++VG L W VD+ +L + FS G V ARV+
Sbjct: 10 LLRHSALASGVAASSSPAVFNAARLMSTKLFVGGLSWGVDDMKLREAFSGFGDVTEARVI 69
Query: 287 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
DR+TG+SRGFGFV +S N AI+ +DG+ +DGR +RVN+A DR
Sbjct: 70 TDRDTGKSRGFGFVNYTSSDAANAAISGMDGKEIDGRPVRVNIANDR 116
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 45/79 (56%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLFVG L + VD KL F G V A VI +R+T +SRGFGFV ++ + A A+
Sbjct: 38 KLFVGGLSWGVDDMKLREAFSGFGDVTEARVITDRDTGKSRGFGFVNYTSSDAANAAISG 97
Query: 221 FHRYDIDGRLLTVNKAAPR 239
+IDGR + VN A R
Sbjct: 98 MDGKEIDGRPVRVNIANDR 116
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE FS +G++++++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAEDRQ 334
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P + + FVG L + D L F G + +++I +RET RSRGFGFVT S+ +
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMR 63
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPR 239
A+E + ++DGR +TVN+A R
Sbjct: 64 DAIEGMNGKELDGRNITVNEAQSR 87
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 57/81 (70%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W DN LE FS +G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAEDRQ 334
+ G+ LDGR I VN A+ R+
Sbjct: 68 GMSGKELDGRNITVNEAQSRR 88
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P D + FVG L + D+ L F G + +++I +RET RSRGFGFVT S+ +
Sbjct: 4 PDVDYRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMR 63
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPR 239
A+E ++DGR +TVN+A R
Sbjct: 64 DAIEGMSGKELDGRNITVNEAQSR 87
>gi|413943841|gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]
Length = 413
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 94/176 (53%), Gaps = 7/176 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E F+K G + + ++ ++ T RGFGFVT S ++ +E
Sbjct: 100 GKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLE 159
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H IDGR + V + P+ + P+ +I+VG +P + +L++ FS +G
Sbjct: 160 DEHV--IDGRTVEVKRTVPKEEMSSKDGPKTK----KIFVGGIPPSLTEDKLKEHFSSYG 213
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
KVV +++ D TGRSRGFGFVT SE + ++ +L G+ + + AE ++
Sbjct: 214 KVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKK 269
>gi|226503497|ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea mays]
gi|219884331|gb|ACL52540.1| unknown [Zea mays]
Length = 413
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 94/176 (53%), Gaps = 7/176 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E F+K G + + ++ ++ T RGFGFVT S ++ +E
Sbjct: 100 GKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLE 159
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
H IDGR + V + P+ + P+ +I+VG +P + +L++ FS +G
Sbjct: 160 DEHV--IDGRTVEVKRTVPKEEMSSKDGPKTK----KIFVGGIPPSLTEDKLKEHFSSYG 213
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
KVV +++ D TGRSRGFGFVT SE + ++ +L G+ + + AE ++
Sbjct: 214 KVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKK 269
>gi|289739881|gb|ADD18688.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 422
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT + +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVQHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F
Sbjct: 65 LQS-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFGR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|410953832|ref|XP_003983574.1| PREDICTED: polyadenylate-binding protein 1-like [Felis catus]
Length = 616
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NL DVD + L LF + G + +V+ + ++ SRGFGFV EEA+KA
Sbjct: 189 EFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRD-DSGHSRGFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL V +A R + R FE G +YV NL +D+
Sbjct: 248 VTDMNGKEVRGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 EKLRREFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEVIRGQPIRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D SRGFGFV + AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVVCDNHG--SRGFGFVHFETHEAAQQAIVTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 252 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 309 NDAIAALDGQNLDGRAIRV 327
A+ ++ + + G+ IR+
Sbjct: 66 ERALDTMNFEVIRGQPIRI 84
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 56/78 (71%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE FS++G VV+++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQ LDGR+I VN A+
Sbjct: 68 GMNGQELDGRSITVNEAQ 85
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F + G V +++I +RET RSRGFGFVT + + A+E
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQELDGRSITVNEA 84
>gi|1346180|sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP1A
gi|496233|gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 166
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 58/78 (74%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE FS++G+V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P + + FVG L + D L F + G V +++I +RET RSRGFGFVT + +
Sbjct: 4 PDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMK 63
Query: 216 KAVEMFHRYDIDGRLLTVNKA 236
A+E + D+DGR +TVN+A
Sbjct: 64 DAIEGMNGQDLDGRSITVNEA 84
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
++ K+F+G L ++ E L F K G V +++ + T RSRGFGF+T ++
Sbjct: 92 DNCKMFIGGLNWETTEETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTFEHPSSVDEV 151
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V+ H +DG+++ ++ PR Q + +I+VG + +V E+ FS++
Sbjct: 152 VKTQHI--LDGKVIDPKRSIPREEQDKTG--------KIFVGGIGADVRPKEFEEFFSQY 201
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G +++A+++ D++TGRSRGFGFVT S + D + G+ I + A+ R
Sbjct: 202 GNIIDAQLMLDKDTGRSRGFGFVTYDSPDAV-DRVCQSKYIEFKGKQIEIKRAQPRH 257
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + DV ++ F + G + A+++ +++T RSRGFGFVT + + ++ +
Sbjct: 178 GKIFVGGIGADVRPKEFEEFFSQYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQ 237
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQ 242
+ + G+ + + +A PR Q
Sbjct: 238 SKY-IEFKGKQIEIKRAQPRHLQ 259
>gi|168003443|ref|XP_001754422.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168003449|ref|XP_001754425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694524|gb|EDQ80872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694527|gb|EDQ80875.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 177
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+F+G L +D ++ L F+K G + A ++ +R T RGFGFVT + + V
Sbjct: 1 GKIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVV- 59
Query: 220 MFHRYDIDGRLLTVNKAAPR-GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
++ IDGR + K+ PR + P+ +I+VG +P + + + F G
Sbjct: 60 -LDKHVIDGRTVEAKKSVPRENMAASKGPKTK----KIFVGGIPPSITDEEFKSYFGGFG 114
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
VV +++ D TGRSRGFGFVT +E + D +A L G+ +
Sbjct: 115 SVVEHQIMQDHSTGRSRGFGFVTFDNEQVVEDILAHGKMHELGGKQV 161
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P+ K+FVG +P + E+ F G+V +++ + T RSRGFGFVT + E
Sbjct: 87 PKTKKIFVGGIPPSITDEEFKSYFGGFGSVVEHQIMQDHSTGRSRGFGFVTFDNEQVVED 146
Query: 217 AVEMFHRYDIDGRLLT 232
+ +++ G+ ++
Sbjct: 147 ILAHGKMHELGGKQVS 162
>gi|281345572|gb|EFB21156.1| hypothetical protein PANDA_005635 [Ailuropoda melanoleuca]
Length = 605
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 100/188 (53%), Gaps = 13/188 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL DVD + L LF + G + +V+ + + SRGFGFV EEA+KAV
Sbjct: 193 IYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRD-DIGHSRGFGFVNFEKHEEAQKAVMDM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ ++ GRLL V +A R + R FE G +YV NL +D+ +L
Sbjct: 252 NGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKNLDDSIDDEKLR 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 332 DRQRRSSF 339
++ R +
Sbjct: 370 RKEERKAI 377
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEVIKGQPVRIMWS-------QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D SRGFGFV + + AIA ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVVCDDHG--SRGFGFVHFETHEAAHQAIATMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 252 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 309 NDAIAALDGQNLDGRAIRV 327
A+ ++ + + G+ +R+
Sbjct: 66 ERALDTMNFEVIKGQPVRI 84
>gi|390597906|gb|EIN07305.1| polyadenylate binding protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 668
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 12/185 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V N+ + + ++ LF G V A V+ E RSRGFGFV T EEA+KAV+
Sbjct: 235 VYVKNIDPEANDDEFRELFTPFGNVTSA-VLQRDEEGRSRGFGFVNFETHEEAQKAVDTL 293
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
H D GR L V++A + + E R +E G +Y+ NL +VD+ +L
Sbjct: 294 HDSDFKGRKLFVSRAQKKSEREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDVDDEKLR 353
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F G + +A+V+ E G S+GFGFV SS E A+A ++ + + + + V++A+
Sbjct: 354 DAFEPFGAITSAKVM-RTEGGTSKGFGFVCFSSPDEATKAVAEMNNKMMGSKPLYVSLAQ 412
Query: 332 DRQRR 336
R+ R
Sbjct: 413 RREVR 417
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 12/185 (6%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P A L+VG L V L +F G V V + T RS G+ +V + E
Sbjct: 48 PAPSASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYFNAADGE 107
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVF 274
+A+E + I GR A R +R P + + G I++ NL +DN L F
Sbjct: 108 RALEQLNYSLIKGR-------ACRIMWSQRDPALRKTGQGNIFIKNLDDAIDNKALHDTF 160
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN---VAE 331
+ G V++ +V D E GRS+G+GFV + AI A++G L+ + + V +
Sbjct: 161 AAFGNVLSCKVATD-EMGRSKGYGFVHYETNEAAESAIKAVNGMLLNDKKVYVGHHVSKK 219
Query: 332 DRQRR 336
DRQ +
Sbjct: 220 DRQAK 224
>gi|121701611|ref|XP_001269070.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
gi|119397213|gb|EAW07644.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
Length = 480
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 94/183 (51%), Gaps = 5/183 (2%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGF--GFVTMSTVEEA 214
P L+VG L V + L +FE G V+ +VI ++ S+G+ GFV A
Sbjct: 89 PNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKVIPDKNKFNSKGYNYGFVEFDDPGAA 148
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
E+A++ + I + VN A T + F I+VG+L EV++ L Q F
Sbjct: 149 ERAMQTLNGRRIHQSEIRVNWAYQSNTTSKEDTSGH---FHIFVGDLSNEVNDEILMQAF 205
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
S G V ARV++D +TGRSRG+GFV + + A+ ++DG+ L RAIR N A +
Sbjct: 206 SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRGDADKALNSMDGEWLGSRAIRCNWANQKG 265
Query: 335 RRS 337
+ S
Sbjct: 266 QPS 268
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +V+ E L F G+V A V+++ +T RSRG+GFV +A+KA+
Sbjct: 187 IFVGDLSNEVNDEILMQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRGDADKALNSM 246
Query: 222 HRYDIDGRLLTVNKAAPRGTQ------------------------PERAPRVFE------ 251
+ R + N A +G P + ++
Sbjct: 247 DGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQT 306
Query: 252 PGFR--IYVGNL-PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
P ++ YVGNL P+ N L +F G V+ R+ DR GF F+ M +
Sbjct: 307 PQWQTTCYVGNLTPYTAQN-DLVPLFQNFGYVLETRLQADR------GFAFIKMDTHENA 359
Query: 309 NDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
AI L+G N++GR ++ + +DR F
Sbjct: 360 AMAICQLNGYNVNGRPLKCSWGKDRPPTGQF 390
>gi|11042|emb|CAA44505.1| hrp48.1 [Drosophila melanogaster]
Length = 385
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F+
Sbjct: 65 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFNR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|156388911|ref|XP_001634736.1| predicted protein [Nematostella vectensis]
gi|156221822|gb|EDO42673.1| predicted protein [Nematostella vectensis]
Length = 313
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 10/173 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L V +P D+ + M+FE ++ +++ ++ + S GFGFV +T E+A+KA++
Sbjct: 7 LIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKL 66
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ + I ++L V + P G + G +YV N+P ++ A + F +G +V
Sbjct: 67 NGFTIGNKVLKVAFSRPGGDNTK--------GANLYVCNIPKQLPEAEFRKAFEAYGNIV 118
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG--RAIRVNVAED 332
N R++ D+ TG +G GFV + E AI++L G G +++ A+D
Sbjct: 119 NCRLLRDKSTGLPKGCGFVLYDKKAEAQAAISSLSGTFFPGSTMGLQIRYADD 171
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
+ P L+V N+ YD + E + LF + G V +++++ + + +GF FVTM+T EEA
Sbjct: 228 QAPPGCTLYVYNIGYDANQEGITALFAQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEA 287
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPR 239
+ A++ + + + L V+ + R
Sbjct: 288 QNAIQTLNGFMYTNKPLQVSLYSKR 312
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 88/224 (39%), Gaps = 48/224 (21%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ A L+V N+P + + FE G + ++ ++ T +G GFV EA+ A
Sbjct: 89 KGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAA 148
Query: 218 VEMFHRYDIDGRLLTV-------NKAAPR-------------GTQPERAP-RVFE----- 251
+ G + + N A R G P R P F+
Sbjct: 149 ISSLSGTFFPGSTMGLQIRYADDNSAKVRPPNNVPNFGQQMGGPGPIRPPANRFQARFNP 208
Query: 252 ----------------------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDR 289
PG +YV N+ ++ + + +F++ G V +++D
Sbjct: 209 MGGGPLPQQKMTHMNGNKSQAPPGCTLYVYNIGYDANQEGITALFAQCGIVNKVDIMWDW 268
Query: 290 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+ + +GF FVTM+++ E +AI L+G + ++V++ R
Sbjct: 269 QRQQCKGFCFVTMATQEEAQNAIQTLNGFMYTNKPLQVSLYSKR 312
>gi|429892776|gb|AGA18933.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F+
Sbjct: 65 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFNR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|353227476|emb|CCA77984.1| related to mRNA polyadenylate-binding protein PAB1 [Piriformospora
indica DSM 11827]
Length = 693
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 102/186 (54%), Gaps = 14/186 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETD-RSRGFGFVTMSTVEEAEKAVEM 220
++V NL ++D ++ LFE GT I + N + D +S+GFGFV T E A+KAV+
Sbjct: 296 IYVKNLDTEIDEDEFRKLFEPYGT--ITSAVLNLDADGKSKGFGFVNYETHEMAQKAVDA 353
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARL 270
+ DI+G+ L V +A R + E R F+ G +Y+ N+ ++D+ +L
Sbjct: 354 LNEKDINGKKLFVGRAQKRNERDEELRRTFDAAKMERLAKLQGVNLYIKNIDDDMDDEKL 413
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
F +G + +++++ D + G S+GFGFV S+ E AIA ++ + + + + V++A
Sbjct: 414 RAEFEPYGTITSSKIMRD-DKGVSKGFGFVCFSTPDEATRAIAEMNNKMIGSKPLYVSLA 472
Query: 331 EDRQRR 336
+ R R
Sbjct: 473 QRRDVR 478
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 6/183 (3%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P A L+VG L V L +F G V V + T RS G+ +V + E+
Sbjct: 107 PSSASLYVGELDPSVTEAILFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNSSDGER 166
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFS 275
A+E + I G+ V+ R +R P + + G I++ NL +DN L F
Sbjct: 167 ALEQLNYSLIKGKPWHVS----RIMWSQRDPALRKTGQGNIFIKNLDEGIDNKALHDTFV 222
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G V++ +V D E G S+G+GFV + + AI A+DG L+ + + V R+
Sbjct: 223 AFGNVLSCKVAVD-EQGNSKGYGFVHYETAEAADAAIKAVDGMLLNDKKVYVGRHIPRKE 281
Query: 336 RSS 338
R S
Sbjct: 282 RQS 284
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 2/175 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G V +V + E S+G+GFV T E A+ A++
Sbjct: 203 IFIKNLDEGIDNKALHDTFVAFGNVLSCKVAVD-EQGNSKGYGFVHYETAEAADAAIKAV 261
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
++ + + V + PR + + + IYV NL E+D ++F +G +
Sbjct: 262 DGMLLNDKKVYVGRHIPRKERQSKLDEIRAQFTNIYVKNLDTEIDEDEFRKLFEPYGTIT 321
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+A + D + G+S+GFGFV + A+ AL+ ++++G+ + V A+ R R
Sbjct: 322 SAVLNLDAD-GKSKGFGFVNYETHEMAQKAVDALNEKDINGKKLFVGRAQKRNER 375
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ L++ N+ D+D EKL FE GT+ ++++ + + S+GFGFV ST +EA +A
Sbjct: 395 QGVNLYIKNIDDDMDDEKLRAEFEPYGTITSSKIMRD-DKGVSKGFGFVCFSTPDEATRA 453
Query: 218 VEMFHRYDIDGRLLTVNKAAPR 239
+ + I + L V+ A R
Sbjct: 454 IAEMNNKMIGSKPLYVSLAQRR 475
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 59/78 (75%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE+ FS++G++++++++ DRETGRSRGFGFVT + E + DAI
Sbjct: 8 YRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQ++DGR I VN A+
Sbjct: 68 GMNGQDMDGRNITVNEAQ 85
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + DSE L F + G + +++I +RET RSRGFGFVT + + A+E
Sbjct: 9 RCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMRDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ D+DGR +TVN+A
Sbjct: 69 MNGQDMDGRNITVNEA 84
>gi|213408421|ref|XP_002174981.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
gi|212003028|gb|EEB08688.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
Length = 453
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 10/177 (5%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
ERQ + EE++ ED K+F+G L ++ E L FE+ G V V+ +
Sbjct: 97 ERQHTEQKPAAQEEQQSPFNREDGKMFIGGLNWETTDESLRDYFEQFGEVLDCTVMRDST 156
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRI 256
T RSRGFGF+T + + V M + +DG+++ +A PR Q + A ++
Sbjct: 157 TGRSRGFGFLTFKDPKCVQ--VVMSKEHHLDGKIIDPKRAIPREEQEKTA--------KM 206
Query: 257 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+VG +P + F++ G+V++A ++ D++TGR RGFGFVT +E + + ++
Sbjct: 207 FVGGVPADCTEEEFRDFFNQFGRVLDATLMMDKDTGRPRGFGFVTFENEAAVENTMS 263
>gi|429892784|gb|AGA18937.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 4 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 63
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F+
Sbjct: 64 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFNR 117
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 118 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 173
>gi|410914419|ref|XP_003970685.1| PREDICTED: RNA-binding protein 34-like [Takifugu rubripes]
Length = 358
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLFVG L D D + L FE+ GT+ V+ N++ RSR FGFVT S+ EEA+ A+
Sbjct: 59 CKLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQVQRSRCFGFVTYSSPEEADSAMA 118
Query: 220 MFHRYDIDGRLLTVNKAAPR--GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+ +DG + V +A R +PE +V +I+VG L + ++ L + FS+
Sbjct: 119 A-RPHTVDGNPVEVKRAVAREDAGKPEALAKV----KKIFVGGLKDDTEDNHLLEHFSQF 173
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G++ A V+ D+++G+ RGFGFV + + ++ + ++G + V A +Q
Sbjct: 174 GEIEKAEVISDKDSGKKRGFGFVYFVDQDSADKSV-VIKFHTINGHKVEVKKALTKQ 229
>gi|195156455|ref|XP_002019115.1| GL26194 [Drosophila persimilis]
gi|194115268|gb|EDW37311.1| GL26194 [Drosophila persimilis]
Length = 223
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 8/181 (4%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
+E E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 1 MEEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTN 60
Query: 214 AEKAVEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
++ + +DGR + PR Q P++ G+++++G LP V L
Sbjct: 61 VNHVLQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRT 114
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
F +GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE
Sbjct: 115 FFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEP 173
Query: 333 R 333
R
Sbjct: 174 R 174
>gi|429892772|gb|AGA18931.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 4 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 63
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F+
Sbjct: 64 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFNR 117
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 118 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 173
>gi|156360993|ref|XP_001625306.1| predicted protein [Nematostella vectensis]
gi|156212133|gb|EDO33206.1| predicted protein [Nematostella vectensis]
Length = 584
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 14/200 (7%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
E+ +P + ++V N D+D E++ + +AG + +V+ + E +S+GFGFV+
Sbjct: 184 EKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFE 242
Query: 210 TVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG---------TQPERAPRV--FEPGFRIYV 258
T EEAE+AV + + +I GR L +A R + +R R+ F+ G +Y+
Sbjct: 243 TPEEAEEAVNVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQ-GVNLYI 301
Query: 259 GNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
NL +D+ RL + FS +G + +A+V+ D + G S+GFGFV SS E A+ ++G+
Sbjct: 302 KNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAVTEMNGR 360
Query: 319 NLDGRAIRVNVAEDRQRRSS 338
L + + V +A+ R+ R +
Sbjct: 361 ILISKPLYVALAQRREERKA 380
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG+V V + T RS G+ +V AEK
Sbjct: 13 ASLYVGDLAPDVTE---AMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEK 69
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I GR + +R P + + G I++ NL +DN L FS
Sbjct: 70 ALDTMNFDPIKGRPCRI-------MWQQRDPSLRKSGVGNIFIKNLDKSIDNKSLYDTFS 122
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
G +++ ++ D E G +G+GFV +E +AIA +DG L+ + + V
Sbjct: 123 AFGNILSCKIAQD-ELGNPKGYGFVHFETEDAALEAIARVDGMLLNDKKVFV 173
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E +++ N D+D ++L +F G +V+ + +T RSRGFGFV EEA+KA
Sbjct: 189 EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + +++GR++ V +A R + R FE G +YV NL +D+
Sbjct: 248 VSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
RL + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 DRLRKEFSPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I GR + + + +R P + + G +++ NL +DN L FS
Sbjct: 68 ALDTMNFEVIKGRPIRIMWS-------QRDPGLRKSGVGNVFIKNLDESIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G SRG+GFV ++ N AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-EHG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 132 VVEAGERQEESGE-EGVFEE--EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEI 188
V A +R E GE + FE+ +E + + L+V NL +D ++L F GT+
Sbjct: 263 VGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITS 322
Query: 189 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 232
A+V+ E S+GFGFV S+ EEA KAV +++GR+++
Sbjct: 323 AKVM--TEGGHSKGFGFVCFSSPEEATKAVT-----EMNGRIVS 359
>gi|222423819|dbj|BAH19875.1| AT4G26650 [Arabidopsis thaliana]
Length = 452
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 151 EEFVEPPED-AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
E+ +E D KLF+G + +D D E+L F K G + A ++ +R T R+RGFGF+ +
Sbjct: 2 EQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFA 61
Query: 210 TVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP----ERAP-RVFEPGF---------- 254
AE+ + ++ IDGR + KA PR Q +P + P
Sbjct: 62 DPSVAERVI--MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTK 119
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+I+VG LP + A + F + G + + V+YD T R RGFGF+T SE + D +
Sbjct: 120 KIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESV-DMVLH 178
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSS 338
L+G+ I V A ++ S+
Sbjct: 179 KTFHELNGKMIEVKRAVPKELSST 202
>gi|17136728|ref|NP_476869.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|24582366|ref|NP_723228.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|24582368|ref|NP_723229.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|281364530|ref|NP_001162897.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|281364532|ref|NP_001162898.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|386769237|ref|NP_001245917.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|386769239|ref|NP_001245918.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|386769241|ref|NP_001245919.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
gi|76803817|sp|P48809.2|RB27C_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein 27C;
Short=Hrb27-C; AltName: Full=HRP48.1; AltName:
Full=hnRNP 48
gi|7297190|gb|AAF52456.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|7297191|gb|AAF52457.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|17862734|gb|AAL39844.1| LD46853p [Drosophila melanogaster]
gi|21711665|gb|AAM75023.1| GH26816p [Drosophila melanogaster]
gi|22945819|gb|AAN10605.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|66804007|gb|AAY56657.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
gi|272406922|gb|ACZ94188.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|272406923|gb|ACZ94189.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|383291369|gb|AFH03591.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|383291370|gb|AFH03592.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|383291371|gb|AFH03593.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
Length = 421
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F+
Sbjct: 65 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFNR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE FS +G++++++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAEDRQ 334
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P + + FVG L + D L F G + +++I +RET RSRGFGFVT S+ +
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMR 63
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPR 239
A+E + ++DGR +TVN+A R
Sbjct: 64 DAIEGMNGKELDGRNITVNEAQSR 87
>gi|119596295|gb|EAW75889.1| hCG2019100, isoform CRA_c [Homo sapiens]
Length = 433
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NLP DVD + L LF + G + +V+ + + SR FGFV EEA+KA
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL +A R + R FE G +YV NL +D+
Sbjct: 248 VVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 DKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEMLKGQPIRI-------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +V D E G SRGFGFV + AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 103/185 (55%), Gaps = 12/185 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+V NL +V ++ LF+K G V A VI E +S+GFGFV T +EA+KAV+
Sbjct: 232 LYVKNLDPEVTQDEFIELFKKYGNVTSA-VISVDEEGKSKGFGFVNFETHDEAQKAVDEL 290
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ +++ G+ L V++A + + E R +E G +Y+ NL +VD+ +L
Sbjct: 291 NDFELKGKKLFVSRAQKKAEREEELRRSYEQAKLEKLSKYQGVNLYIKNLEDDVDDDKLR 350
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F G + + +V+ D E G+S+GFGFV SS E A+A ++ + + + + V++A+
Sbjct: 351 AEFEPFGTITSCKVMRD-EKGQSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQ 409
Query: 332 DRQRR 336
R+ R
Sbjct: 410 RREVR 414
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 2/175 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F GTV +V + ET RS+G+GFV T E AE A++
Sbjct: 139 IFIKNLDEAIDNKALHDTFAAFGTVLSCKVATD-ETGRSKGYGFVHYETAEAAENAIKAV 197
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ ++ + + V R + + + +YV NL EV ++F ++G V
Sbjct: 198 NGMLLNDKKVYVGHHISRKERQSKLEEMRAQFTNLYVKNLDPEVTQDEFIELFKKYGNVT 257
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+A + D E G+S+GFGFV + E A+ L+ L G+ + V+ A+ + R
Sbjct: 258 SAVISVDEE-GKSKGFGFVNFETHDEAQKAVDELNDFELKGKKLFVSRAQKKAER 311
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 9/180 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG L V L +F G V V + T RS G+ +V + E+A+E
Sbjct: 49 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 108
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHG 278
+ I R + + +R P + + G I++ NL +DN L F+ G
Sbjct: 109 QLNYSLIKNRPCRIMWS-------QRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFG 161
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
V++ +V D ETGRS+G+GFV + +AI A++G L+ + + V R+ R S
Sbjct: 162 TVLSCKVATD-ETGRSKGYGFVHYETAEAAENAIKAVNGMLLNDKKVYVGHHISRKERQS 220
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ L++ NL DVD +KL FE GT+ +V+ + E +S+GFGFV S+ +EA KA
Sbjct: 331 QGVNLYIKNLEDDVDDDKLRAEFEPFGTITSCKVMRD-EKGQSKGFGFVCFSSPDEATKA 389
Query: 218 VEMFHRYDIDGRLLTVNKAAPR 239
V + I + L V+ A R
Sbjct: 390 VAEMNNKMIGTKPLYVSLAQRR 411
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG L V A L ++F+ G V + RV D T RS G+ +V + + A
Sbjct: 47 PSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERA 106
Query: 312 IAALDGQNLDGRAIRV 327
+ L+ + R R+
Sbjct: 107 LEQLNYSLIKNRPCRI 122
>gi|213403408|ref|XP_002172476.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212000523|gb|EEB06183.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 662
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 12/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N+ +V E+ + LFEK G + ++ + E+ + RGFGFV + E A+KAV+
Sbjct: 262 VYIKNIDPEVTDEEFSGLFEKFGAITSFSLVKD-ESGKPRGFGFVNFESHEAAQKAVDEM 320
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARLE 271
+ Y+ G+ L V +A R + + +E G +++ NL EVD+ L+
Sbjct: 321 NDYEFHGKKLYVGRAQKRHEREAELRKRYEQMKLEKMSKYQGVNLFIKNLSDEVDDNLLK 380
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
FS G + +A+V+ D E G+S+GFGFV SS E AIA ++ + L G+ + V +A+
Sbjct: 381 TEFSAFGTITSAKVMTD-ENGKSKGFGFVCYSSPEEATKAIAEMNQRMLAGKPLYVALAQ 439
Query: 332 DRQRRSS 338
+ R S
Sbjct: 440 RKDVRRS 446
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 9/183 (4%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P++ L+VG L V L +F G V V + T +S G+ +V ++ EK
Sbjct: 76 PKNTSLYVGELDPSVTEAMLFEIFSTVGPVASIRVCRDAVTRQSLGYAYVNYHNADDGEK 135
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A+E + I GR A R +R P + + G I++ NL +DN L FS
Sbjct: 136 ALEELNYSLIKGR-------ACRIMWSQRDPSLRKTGTGNIFIKNLDPAIDNKALHDTFS 188
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +V D E G S+G+GFV +S N AI ++G L+ + + V R+
Sbjct: 189 AFGTILSCKVALD-EYGNSKGYGFVHFASIDSANAAIEHVNGMLLNDKKVYVGHHVSRRD 247
Query: 336 RSS 338
R S
Sbjct: 248 RQS 250
>gi|367007988|ref|XP_003688723.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
gi|357527033|emb|CCE66289.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
Length = 518
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ K+F+G L ++ + L F K G+V +++ + T RSRGFGF+T ++
Sbjct: 162 DSCKMFIGGLNWETTEDTLRDYFNKYGSVVELKIMKDNNTGRSRGFGFLTFENASSVDEV 221
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V+ H +DG+++ +A PR Q + +I+VG + +V E+ F+++
Sbjct: 222 VKTQHI--LDGKVIDPKRAIPREEQDKTG--------KIFVGGIGADVRPKEFEEFFAQY 271
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
G +++A+++ D++TGRSRGFGFVT S + D + G+ I + AE R +
Sbjct: 272 GTIIDAQLMLDKDTGRSRGFGFVTYDSPDAV-DRVCQSKYIEFKGKQIEIKRAEPRNNQK 330
Query: 338 S 338
+
Sbjct: 331 A 331
>gi|429892780|gb|AGA18935.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F+
Sbjct: 65 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFNR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|24650831|ref|NP_733249.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
gi|157652|gb|AAA28622.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172509|gb|AAF56800.2| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
Length = 364
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 95/194 (48%), Gaps = 10/194 (5%)
Query: 144 EEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGF 203
E+ F ++ EP KLF+G L Y E L FEK G + V+ + T RSRGF
Sbjct: 14 EQDDFPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGF 73
Query: 204 GFVTM---STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGN 260
GF+T S ++EA+K+ + IDGR++ +A PR Q +P +++VG
Sbjct: 74 GFITYSHSSMIDEAQKS----RPHKIDGRVVEPKRAVPR--QDIDSPNAGATVKKLFVGA 127
Query: 261 LPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL 320
L + D + F G +V+ +V D+ETG+ RGF FV + D + L
Sbjct: 128 LKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQL 186
Query: 321 DGRAIRVNVAEDRQ 334
+G+ + V A +Q
Sbjct: 187 NGKMVDVKKALPKQ 200
>gi|224114443|ref|XP_002316761.1| predicted protein [Populus trichocarpa]
gi|222859826|gb|EEE97373.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 93/179 (51%), Gaps = 11/179 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLF+G + +D D E+L F K G V A ++ +R T R+RGFGFV + + AE+ +
Sbjct: 6 GKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRATGRARGFGFVVFADLTVAERVI- 64
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRV----FEPG----FRIYVGNLPWEVDNARLE 271
++ IDGR + KA PR Q + + PG +I+VG L V +
Sbjct: 65 -MEKHVIDGRTVEAKKAVPRDDQHILSRSISNIHGSPGPGRTKKIFVGGLASTVTENEFK 123
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ F ++G +++ V+YD T R RGFGF+T SE E D + L+G+ + V A
Sbjct: 124 KYFEQYGIIIDVVVMYDHNTQRPRGFGFITYDSE-EAVDRVLHKTFHELNGKMVEVKRA 181
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G + W+ D RL++ FS++G+VV A ++ DR TGR+RGFGFV + T I
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRATGRARGFGFVVFADLTVAERVI-- 64
Query: 315 LDGQNLDGRAIRVNVAEDR 333
++ +DGR + A R
Sbjct: 65 MEKHVIDGRTVEAKKAVPR 83
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P K+FVG L V + FE+ G + V+Y+ T R RGFGF+T + E +
Sbjct: 102 PGRTKKIFVGGLASTVTENEFKKYFEQYGIIIDVVVMYDHNTQRPRGFGFITYDSEEAVD 161
Query: 216 KAV-EMFHRYDIDGRLLTVNKAAPR--GTQPERAP 247
+ + + FH +++G+++ V +A P+ P R+P
Sbjct: 162 RVLHKTFH--ELNGKMVEVKRAVPKELSPGPSRSP 194
>gi|91094515|ref|XP_971941.1| PREDICTED: similar to poly A binding protein [Tribolium castaneum]
gi|270000753|gb|EEZ97200.1| hypothetical protein TcasGA2_TC004389 [Tribolium castaneum]
Length = 565
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 24/240 (10%)
Query: 110 NQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPY 169
N+ ++ G L + G+ + ER++E GE+ + ++V N
Sbjct: 154 NKAIEKVNGMLLN-GKKVYVGKFIPRAEREKEIGEKS----------KKYTNVYVKNFGR 202
Query: 170 DVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGR 229
++ E+L LF+ GT+ V+ N + S+GFGF+ E AEKAV + Y+++G
Sbjct: 203 NLTQEQLYDLFKNYGTITSCVVMANPDGT-SKGFGFIAFEEPESAEKAVTEMNNYELNGT 261
Query: 230 LLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGK 279
L V +A + + + + +E G +Y+ NL DN RL + FS+ G
Sbjct: 262 NLYVGRAQKKSERIKELKKCYEQMKLERYNRIQGANVYIKNLDDTFDNDRLRKEFSQFGA 321
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
+ +A+V+ E GRS+GFGFV S+ E + AI +DG+ + + I V +A+ + R ++
Sbjct: 322 ITSAKVM--TEGGRSKGFGFVCFSTPEEASKAITEMDGRMIGSKPIYVALAQRYEDRRAY 379
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VG+L DV L F AG + V + T +S G+ +V S EAE+ ++
Sbjct: 14 LYVGDLHPDVTEALLYEKFSPAGQILSLRVCRDSRTKQSLGYAYVNFSQTIEAERVLDTM 73
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKV 280
+ + G+ + R +R P + + G +++ NL +DN + FS G +
Sbjct: 74 NFDLLKGKPI-------RIMWSQRDPSLRKSGIGNVFIKNLDKSIDNKAMYDTFSAFGNI 126
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
++ +V D + G S+G+GFV S N AI ++G L+G+ + V
Sbjct: 127 LSCKVAID-DDGVSKGYGFVHFESIEAANKAIEKVNGMLLNGKKVYV 172
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ + F G + +V + + S+G+GFV ++E A KA+E
Sbjct: 102 VFIKNLDKSIDNKAMYDTFSAFGNILSCKVAID-DDGVSKGYGFVHFESIEAANKAIEKV 160
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ ++G+ + V K PR + + + +YV N + +L +F +G +
Sbjct: 161 NGMLLNGKKVYVGKFIPRAEREKEIGEKSKKYTNVYVKNFGRNLTQEQLYDLFKNYGTIT 220
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+ VV G S+GFGF+ A+ ++ L+G + V A+ + R
Sbjct: 221 SC-VVMANPDGTSKGFGFIAFEEPESAEKAVTEMNNYELNGTNLYVGRAQKKSER 274
>gi|219362753|ref|NP_001137092.1| uncharacterized protein LOC100217268 [Zea mays]
gi|194698334|gb|ACF83251.1| unknown [Zea mays]
gi|323388723|gb|ADX60166.1| SNF2 transcription factor [Zea mays]
gi|413925208|gb|AFW65140.1| hypothetical protein ZEAMMB73_790427 [Zea mays]
Length = 383
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 97/175 (55%), Gaps = 4/175 (2%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG LP D F + G + + ++ +R T + RGFGF+T S +K +E
Sbjct: 25 GKIFVGGLPRDTTDATFVRHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSDPAVVDKVIE 84
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H I+G+ + + + P+G+ + + + F+ +I+VG LP + + F+ +G
Sbjct: 85 DNHV--INGKQVEIKRTIPKGSV-QSSSKDFKTK-KIFVGGLPSTLTEDEFKSFFARYGT 140
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
VV+ ++++D ET RSRGFGF+ +SE ++D +A + +L G + + AE ++
Sbjct: 141 VVDHQIMFDHETKRSRGFGFIVFASEQVVDDLLANGNMVDLAGSKVEIKKAEPKK 195
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 60/81 (74%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ L+ FS++G V++++++ DRETGRSRGFGFVT +S+ + AI
Sbjct: 6 YRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 65
Query: 314 ALDGQNLDGRAIRVNVAEDRQ 334
A++GQ+LDGR I VN A+ R+
Sbjct: 66 AMNGQDLDGRNITVNEAQSRR 86
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D + L F K G V +++I +RET RSRGFGFVT ++ E +A+E
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 221 FHRYDIDGRLLTVNKAAPR 239
+ D+DGR +TVN+A R
Sbjct: 67 MNGQDLDGRNITVNEAQSR 85
>gi|429892774|gb|AGA18932.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 417
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 1 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 60
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F+
Sbjct: 61 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFNR 114
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 115 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 170
>gi|194760296|ref|XP_001962377.1| GF15435 [Drosophila ananassae]
gi|190616074|gb|EDV31598.1| GF15435 [Drosophila ananassae]
Length = 421
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F
Sbjct: 65 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFGR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|356552729|ref|XP_003544715.1| PREDICTED: uncharacterized protein LOC100788515 [Glycine max]
Length = 478
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 90/186 (48%), Gaps = 25/186 (13%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLF+G + +D D E+L F K G V A ++ +R T R+RGFGFV + AE+ +
Sbjct: 6 GKLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVI- 64
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQ---------------PERAPRVFEPGFRIYVGNLPWE 264
++ IDGR + KA PR Q P R ++F VG LP
Sbjct: 65 -MDKHIIDGRTVEAKKAVPRDDQQTINRQSGSIHGSPSPGRTKKIF-------VGGLPST 116
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
+ + ++ F + G + + V+YD T R RGFGF+T SE E D + L+G+
Sbjct: 117 ITESDFKKYFDQFGTIADVVVMYDHNTQRPRGFGFITYDSE-EAVDRVLYKTFHELNGKM 175
Query: 325 IRVNVA 330
+ V A
Sbjct: 176 VEVKRA 181
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G + W+ D+ RL++ F ++G+V+ A ++ DR TGR+RGFGFV + + I
Sbjct: 7 KLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVI-- 64
Query: 315 LDGQNLDGRAIRVNVAEDR 333
+D +DGR + A R
Sbjct: 65 MDKHIIDGRTVEAKKAVPR 83
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
P K+FVG LP + F++ GT+ V+Y+ T R RGFGF+T + E
Sbjct: 101 SPGRTKKIFVGGLPSTITESDFKKYFDQFGTIADVVVMYDHNTQRPRGFGFITYDSEEAV 160
Query: 215 EKAV-EMFHRYDIDGRLLTVNKAAPR--GTQPERAPRV 249
++ + + FH +++G+++ V +A P+ P R+P +
Sbjct: 161 DRVLYKTFH--ELNGKMVEVKRAVPKELSPGPTRSPLI 196
>gi|195387610|ref|XP_002052487.1| GJ21323 [Drosophila virilis]
gi|194148944|gb|EDW64642.1| GJ21323 [Drosophila virilis]
Length = 421
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F
Sbjct: 65 LQS-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFGR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|443895242|dbj|GAC72588.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 394
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 95/187 (50%), Gaps = 10/187 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+ V NLP L +F G ++ +V+ +R + +GFV V AE+AV
Sbjct: 29 VHVANLPSTTTERALRDMFASLGPIQSVKVVASRNSA-GLAYGFVEFVDVSSAERAVRTL 87
Query: 222 HRYDIDGRLLTVNKA-------APRGTQPER-APRVFEPG-FRIYVGNLPWEVDNARLEQ 272
+ G + V A A T+P+R AP G ++VG+L +VD++ L
Sbjct: 88 DGWLCFGIPIKVCWAKQSMHPEAMTVTEPDRSAPTHSNAGNAHLFVGDLSPDVDDSMLYS 147
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
FS +V+ RV+YD ETG+SRGFGFV+ S+ + IAA+ GQ L GR IRVN A
Sbjct: 148 SFSRLPSLVDVRVMYDAETGKSRGFGFVSFRSKRDAETCIAAMQGQWLGGRQIRVNWANQ 207
Query: 333 RQRRSSF 339
+ + S
Sbjct: 208 KNSQLSI 214
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
+A LFVG+L DVD L F + ++ V+Y+ ET +SRGFGFV+ + +AE +
Sbjct: 128 NAHLFVGDLSPDVDDSMLYSSFSRLPSLVDVRVMYDAETGKSRGFGFVSFRSKRDAETCI 187
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQ 242
+ GR + VN A + +Q
Sbjct: 188 AAMQGQWLGGRQIRVNWANQKNSQ 211
>gi|414591910|tpg|DAA42481.1| TPA: hypothetical protein ZEAMMB73_522608 [Zea mays]
Length = 449
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
+E + KLFVG + ++ ++L F + G V A ++ +R T R+RGFGFV +
Sbjct: 1 MEAADHGKLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAV 60
Query: 214 AEKAVEMFHRYDIDGRLLTVNKAAPRGTQP----ERAPRVFEPG----FRIYVGNLPWEV 265
AE+ H IDGR++ KA PR A + PG +I+VG LP V
Sbjct: 61 AERVTTEKHM--IDGRMVEAKKAVPRDDHSIVTKSNASSIGSPGPGRTRKIFVGGLPSNV 118
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
A + F + G + + V+YD T R RGFGF+T SE ++ A+
Sbjct: 119 TEADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 165
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 62/83 (74%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG + ++ D+ L++ F ++G VV AR++ DRETGRSRGFGFVT +S E + AI A
Sbjct: 41 KLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQA 100
Query: 315 LDGQNLDGRAIRVNVAEDRQRRS 337
LDGQ+L GR +RVN A +R +R+
Sbjct: 101 LDGQDLHGRRVRVNYATERPQRT 123
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+KLFVG + + D L F+K G V A +I +RET RSRGFGFVT ++ EEA A++
Sbjct: 40 SKLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQ 99
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER 245
D+ GR + VN A R P+R
Sbjct: 100 ALDGQDLHGRRVRVNYATER---PQR 122
>gi|187956922|gb|AAI58075.1| EG627828 protein [Mus musculus]
gi|187956950|gb|AAI57905.1| EG627828 protein [Mus musculus]
gi|219521461|gb|AAI72011.1| EG627828 protein [Mus musculus]
Length = 351
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R Y +DGR++ +A R + P +I+VG + + + L
Sbjct: 68 DAA--MCARPYKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 123
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 124 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 182
Query: 334 QRRSS 338
Q S
Sbjct: 183 QEMRS 187
>gi|348504313|ref|XP_003439706.1| PREDICTED: ELAV-like protein 4-like [Oreochromis niloticus]
Length = 476
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 152 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 211
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 212 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 263
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G A I V A +
Sbjct: 264 QYGRIITSRILVDQVTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNP 323
Query: 334 QRRSS 338
+++S
Sbjct: 324 SQKTS 328
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 392 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 451
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 452 ASLNGYRLGDRVLQVSFKTNKTHKS 476
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 395 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 454
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 455 NGYRLGDRVLQV 466
>gi|322695076|gb|EFY86891.1| cutinase negative acting protein [Metarhizium acridum CQMa 102]
Length = 516
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 23/207 (11%)
Query: 150 EEEFVEPPEDAK--------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSR 201
EEE P+ AK LF GNL +++D L+ F+ + A V+ +R+ RSR
Sbjct: 249 EEEIDATPKKAKTDEQAASTLFAGNLSWNIDDNTLSEAFKGFEGLVGARVVTDRDGGRSR 308
Query: 202 GFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA-------PRGTQPERAPR----VF 250
GFG+V T E A KA E ++D R L ++ A PR +RA + V
Sbjct: 309 GFGYVDFETAEAATKAYEAMQGSELDSRPLNLDYANSRPADSNPRDRATDRAKKHGDSVS 368
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
+++GNLP++ D + Q F+E +V + R+ D ++G +GFG+VT +S + +
Sbjct: 369 PESETLFIGNLPFDTDQETVRQFFAEVAEVASVRLPTDPDSGNLKGFGYVTFTSVEDAKN 428
Query: 311 AIAALDGQNL----DGRAIRVNVAEDR 333
L+G L R++R++ A R
Sbjct: 429 VFQQLNGAPLGNGRTSRSVRLDFASSR 455
>gi|452981460|gb|EME81220.1| hypothetical protein MYCFIDRAFT_211785, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 353
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ E L F + G V V+ + T RSRGFGF+T +
Sbjct: 101 EDGKMFIGGLNWETTDESLKQYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKNVNTV 160
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
M + +DG+L+ +A PR Q A +I+VG + E A + F +
Sbjct: 161 --MVKEHSLDGKLIDPKRAIPRDEQERTA--------KIFVGGVSQEATEADFKDFFMKF 210
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETE----LNDAIAALDGQNLDGRAIRVNVAEDR 333
G+V++A ++ D++TGR RGFGFVT SE L +A L G+ I V A+ R
Sbjct: 211 GRVLDATLMMDKDTGRPRGFGFVTFDSELAVERTLEGPLAIL------GKPIEVKRAQPR 264
Query: 334 QR 335
+
Sbjct: 265 GK 266
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G L WE + L+Q FS+ G+VV V+ D TGRSRGFGF+T +N +
Sbjct: 104 KMFIGGLNWETTDESLKQYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKNVNTVM-- 161
Query: 315 LDGQNLDGRAI--RVNVAEDRQRRSS 338
+ +LDG+ I + + D Q R++
Sbjct: 162 VKEHSLDGKLIDPKRAIPRDEQERTA 187
>gi|401623736|gb|EJS41824.1| hrp1p [Saccharomyces arboricola H-6]
Length = 540
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E K+F+G L +D + L F K GTV +++ + T RSRGFGF++ ++
Sbjct: 159 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 218
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
V+ H +DG+++ +A PR Q + +I+VG + +V E+ FS+
Sbjct: 219 VKTQHI--LDGKVIDPKRAIPRDEQDKTG--------KIFVGGIGPDVRPKEFEEFFSQW 268
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G +++A+++ D++TG+SRGFGFVT S + D + + R I + AE R
Sbjct: 269 GTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQNKFIDFKDRKIEIKRAEPRH 324
>gi|328715672|ref|XP_001946271.2| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 964
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 104/188 (55%), Gaps = 14/188 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N+ +V+ ++L +F+K GT+ +V++ ++ SRGFGFV +EAEKAV
Sbjct: 499 VYIKNIDENVNEKELFEMFKKYGTITSCKVMF-KDDGSSRGFGFVAFEDPKEAEKAVTEL 557
Query: 222 H-RYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARL 270
H + +G+ VN+A + + + R FE G +YV NL +D+ RL
Sbjct: 558 HGKKSPEGKTYYVNRAQKKTERQQELKRKFEQYKIERINRYQGVNLYVKNLDDTIDDERL 617
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ FS G + +A+V+ D GRS+GFGFV SS E A+ ++G+ + + + V +A
Sbjct: 618 RREFSAFGTIKSAKVMMD--DGRSKGFGFVYFSSPEEATKAVTDMNGRIVGTKPLYVTLA 675
Query: 331 EDRQRRSS 338
+ ++ R +
Sbjct: 676 QRKKDRKA 683
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 175 KLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 234
K + + + + + ET S+G+GFV T + A +++E + ++G+ + V
Sbjct: 418 KYIHCYAHCLNLALVDSVAQDETGNSKGYGFVHFETKQSATQSIEKVNGMLLNGKKVFVG 477
Query: 235 KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 294
+ R + + + + +Y+ N+ V+ L ++F ++G + + +V++ ++ G S
Sbjct: 478 RFVGRNDREKELGQQAKLYTNVYIKNIDENVNEKELFEMFKKYGTITSCKVMF-KDDGSS 536
Query: 295 RGFGFVTMSSETELNDAIAALDGQNL-DGRAIRVNVAEDRQRR 336
RGFGFV E A+ L G+ +G+ VN A+ + R
Sbjct: 537 RGFGFVAFEDPKEAEKAVTELHGKKSPEGKTYYVNRAQKKTER 579
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 23/144 (15%)
Query: 104 EEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEF----VEPPED 159
E+P + E G S PEG+ V +++ E +E + E++ + +
Sbjct: 545 EDPKEAEKAVTELHGKKS----PEGKTYYVNRAQKKTERQQELKRKFEQYKIERINRYQG 600
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
L+V NL +D E+L F GT++ A+V+ + RS+GFGFV S+ EEA KAV
Sbjct: 601 VNLYVKNLDDTIDDERLRREFSAFGTIKSAKVMM--DDGRSKGFGFVYFSSPEEATKAVT 658
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQP 243
D++GR++ GT+P
Sbjct: 659 -----DMNGRIV--------GTKP 669
>gi|318086954|gb|ADV40069.1| putative heterogeneous nuclear ribonucleoprotein isoform A
[Latrodectus hesperus]
Length = 293
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMST 210
EE + E K+FVG L ++ EKL F + G V V+ N ET+RSRGFGFVT
Sbjct: 7 EEVGQGEEAGKIFVGGLSWETTQEKLQEYFSRYGEVVDCVVMKNSETNRSRGFGFVTFKD 66
Query: 211 VEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARL 270
V K + +++DGR + + R +Q + + ++++G LP L
Sbjct: 67 VACVAKVLSS-GPHEVDGRTIDPKVCSSRDSQQNKKAGQYP---KVFLGGLPPNCTETDL 122
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
FS +G VV ++YD+E +SRGFGF++ +E + + A ++G+ I A
Sbjct: 123 RSFFSRYGTVVEVVLMYDQEKKKSRGFGFLSFETEDSVKQ-VCAEHFVKINGKKIECKHA 181
Query: 331 EDRQRR 336
E R ++
Sbjct: 182 EPRDKK 187
>gi|125984017|ref|XP_001355773.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
gi|54644090|gb|EAL32832.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
Length = 421
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F
Sbjct: 65 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFGR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|429892778|gb|AGA18934.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F+
Sbjct: 65 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFNR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|164661105|ref|XP_001731675.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
gi|159105576|gb|EDP44461.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
Length = 367
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 11/172 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG L +D D E L F + G V V+ + + RSRGF FVT S + M
Sbjct: 1 MFVGGLNWDTDEESLRRYFGQFGPVTSCTVMRDGASGRSRGFAFVTFSDPKSVNAV--MV 58
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ +DG+++ +A PR PE++ + +VG LP V +Q+F + G V+
Sbjct: 59 REHFLDGKIIDPKRAIPR---PEQSKTQ-----KCFVGGLPQTVTQDSFKQLFQQFGHVL 110
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
++ V+ D++TGR RGFGFVT ++ + + +A LDG+ I V A+ R
Sbjct: 111 DSTVMMDKDTGRPRGFGFVTFENDDGVENTLAHQP-LLLDGKQIEVKRAQSR 161
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 147 VFEEEEFVEPPEDAK---LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGF 203
+ + + + PE +K FVG LP V + LF++ G V + V+ +++T R RGF
Sbjct: 67 IIDPKRAIPRPEQSKTQKCFVGGLPQTVTQDSFKQLFQQFGHVLDSTVMMDKDTGRPRGF 126
Query: 204 GFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT-QPERAPRVF 250
GFVT + E + +DG+ + V +A RG QP AP F
Sbjct: 127 GFVTFENDDGVENTLA-HQPLLLDGKQIEVKRAQSRGQPQPNAAPNRF 173
>gi|194862724|ref|XP_001970091.1| GG10443 [Drosophila erecta]
gi|195471631|ref|XP_002088106.1| GE14209 [Drosophila yakuba]
gi|190661958|gb|EDV59150.1| GG10443 [Drosophila erecta]
gi|194174207|gb|EDW87818.1| GE14209 [Drosophila yakuba]
Length = 421
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F
Sbjct: 65 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFGR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|256075085|ref|XP_002573851.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044948|emb|CCD82496.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 726
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 13/186 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L++ N P + D+EKL +F + G ++ A V+ + E +S+GFGFV + AE AV+
Sbjct: 194 LYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSE-GKSKGFGFVCFLDPDHAENAVKTM 252
Query: 222 HRYDIDGRLLTVNKAAPRGTQPE---------RAPR--VFEPGFRIYVGNLPWEVDNARL 270
H +I+GR L +A + + E RA R + +YV NL +D+ RL
Sbjct: 253 HGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRL 312
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
E+ FS HG + +A+V+ D RS+GFGFV ++ + A+ ++G + + + V +A
Sbjct: 313 EEAFSVHGSITSAKVMKD-ANNRSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALA 371
Query: 331 EDRQRR 336
+ ++ R
Sbjct: 372 QRKEDR 377
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 99/176 (56%), Gaps = 6/176 (3%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL ++ ++L F G + +++ + E +S+G+GFV E AE+A+E
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMD-ENGQSKGYGFVHFEKEECAERAIEKI 161
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRV-FEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ I R++ V K P+ + +A +V F +Y+ N P E DN +L+++F+E G++
Sbjct: 162 NNMIIRDRVVYVGKFIPKTERKSQARKVKFN---NLYIKNFPPETDNEKLKEMFNEFGEI 218
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+A V+ D E G+S+GFGFV +A+ + G+ ++GRA+ A+ ++ R
Sbjct: 219 KSACVMKDSE-GKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEER 273
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
++ L+VG+L V L F + G V A V + T S G+G+V + AE+A+
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQAL 71
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEH 277
E+ + + GR + + +R P + + G I++ NL ++ L FS
Sbjct: 72 EVLNYESLMGRPIRI-------MWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFF 124
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
G++++ ++V D E G+S+G+GFV E AI ++ + R + V
Sbjct: 125 GRILSCKIVMD-ENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYV 173
>gi|49119672|gb|AAH72716.1| Zgc:91918 [Danio rerio]
Length = 360
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
+ G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 147 QFGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVKFANNP 206
Query: 334 QRRSS 338
++SS
Sbjct: 207 SQKSS 211
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 221 FHRYDIDG--RLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
F IDG L +N A GT G+ I+V NL + D L Q+F G
Sbjct: 253 FSPMTIDGVTSLAGINLPAHAGT-----------GWCIFVYNLAPDADENVLWQMFGPFG 301
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 302 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASLNGYRLGDRVLQVSFKTNKTHKA 360
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 279 IFVYNLAPDADENVLWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASL 338
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 339 NGYRLGDRVLQV 350
>gi|342887592|gb|EGU87074.1| hypothetical protein FOXB_02468 [Fusarium oxysporum Fo5176]
Length = 541
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 12/176 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V V+ + T RSRGFGF+T +
Sbjct: 117 EDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVN-- 174
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+ M + +DG+++ +A PR Q + + +I+VG + E + ++ F++
Sbjct: 175 IVMVKEHFLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDQEFKEYFAQF 226
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G+VV+A ++ D++TGR RGFGFVT +E ++ I + G+ I V A+ R
Sbjct: 227 GRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACINVP--LEIHGKPIEVKKAQPR 280
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G L WE + L FS+ G+VV V+ D TGRSRGFGF+T +N I
Sbjct: 120 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVN--IVM 177
Query: 315 LDGQNLDGRAI--RVNVAEDRQRRSS 338
+ LDG+ I + + D Q ++S
Sbjct: 178 VKEHFLDGKIIDPKRAIPRDEQEKTS 203
>gi|195338791|ref|XP_002036007.1| GM16252 [Drosophila sechellia]
gi|195577167|ref|XP_002078444.1| Hrb27C [Drosophila simulans]
gi|194129887|gb|EDW51930.1| GM16252 [Drosophila sechellia]
gi|194190453|gb|EDX04029.1| Hrb27C [Drosophila simulans]
Length = 421
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F
Sbjct: 65 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFGR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|15220810|ref|NP_173208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191496|gb|AEE29617.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 369
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 96/182 (52%), Gaps = 5/182 (2%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLFVG + ++ +E A F K G V + ++ +R T RGFGFVT + AEK +E
Sbjct: 66 GKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLE 125
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H ID R + + + PRG + V + +I+VG LP ++ L+ F +G
Sbjct: 126 EDHV--IDDRKVDLKRTLPRGDKDTDIKAVSKT-RKIFVGGLPPLLEEDELKNYFCVYGD 182
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ--RRS 337
++ +++YD TGRSRGFGFVT +E ++ + L + + + AE ++ R +
Sbjct: 183 IIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGRDN 242
Query: 338 SF 339
SF
Sbjct: 243 SF 244
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+FVG LP ++ ++L F G + +++Y+ T RSRGFGFVT T + ++
Sbjct: 158 KIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSD 217
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVF 250
+++ + + + +A P+ T + + R +
Sbjct: 218 GKVHELGDKQVEIKRAEPKRTGRDNSFRSY 247
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 98/180 (54%), Gaps = 13/180 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D E+L +F + G + +V+ + + +S+GFGFV+ T E A++AVE
Sbjct: 192 VYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTD-SSGKSKGFGFVSFDTHEAAQRAVEYM 250
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARLE 271
+ DI G+++ V +A + + ++FE G ++Y+ NL +D +L
Sbjct: 251 NGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRERFGRCRGVKLYIKNLDETIDEEQLR 310
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +V+ E GRS+GFG + S E A+A ++GQ L +AI + +A+
Sbjct: 311 RAFSSFGSMSRVKVM--EEEGRSKGFGLICFSCPEEATKAMAEMNGQVLGSKAINIALAQ 368
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
+ + ++ +F+ NL +D++ L F G + ++V+ + + SRG+ FV
Sbjct: 87 QRDAYLRKSGIGNVFIKNLDRSIDNKMLYEHFSAFGKILSSKVMSDDKG--SRGYAFVHF 144
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNK--AAPRGTQPERAPRVFEPG---FRIYVGNLPW 263
+ A++A+E +++G LL + P + ER + +Y+ N
Sbjct: 145 QSQSAADRAIE-----EMNGALLKNCRLFVGPFKNRKEREAELQNKANEFTNVYIKNFGD 199
Query: 264 EVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGR 323
++D+ RL++VFS++GK+V+ +V+ D +G+S+GFGFV+ + A+ ++G+++ G+
Sbjct: 200 DMDDERLKEVFSQYGKIVSVKVMTD-SSGKSKGFGFVSFDTHEAAQRAVEYMNGKDICGQ 258
Query: 324 AIRVNVAEDRQRRSS 338
+ V A+ + R +
Sbjct: 259 MVFVGRAQKKAERQA 273
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+LP DV + L F G V + + T RS G+ +V + +A+K ++
Sbjct: 10 ASLYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQKVLD 69
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I G+ + R +R + + G +++ NL +DN L + FS G
Sbjct: 70 TMNFDMIQGK-------SIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKMLYEHFSAFG 122
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
K+++++V+ D + SRG+ FV S++ + AI ++G L + V ++R+ R
Sbjct: 123 KILSSKVMSDDKG--SRGYAFVHFQSQSAADRAIEEMNGALLKNCRLFVGPFKNRKER 178
>gi|66804019|gb|AAY56658.1| heterogeneous nuclear ribonucleoprotein [Drosophila simulans]
Length = 421
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F
Sbjct: 65 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFGR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|195052284|ref|XP_001993272.1| GH13720 [Drosophila grimshawi]
gi|193900331|gb|EDV99197.1| GH13720 [Drosophila grimshawi]
Length = 421
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F
Sbjct: 65 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFGR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LFVGNL ++VD E L FE G + ++ +R++ RSRGFG+V + +A KA
Sbjct: 286 ANLFVGNLSWNVDEEWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADAAKAYN 345
Query: 220 MFHRYDIDGRLLTVNKAAPR--------GTQPERAPRVFEPGFR-------IYVGNLPWE 264
+IDGR + ++ A R Q R G + ++VGN+P+
Sbjct: 346 AKKDTEIDGRKINLDYATGRPANNNNNNNNQDRAQARARNFGDQASPESDTLFVGNIPFS 405
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
+ + ++F + G +V R+ D E+GR +GFG+V SS E A L+G L+GR
Sbjct: 406 ANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDLNGAELNGRP 465
Query: 325 IRVNVAEDR 333
+R++ + R
Sbjct: 466 VRLDFSTPR 474
>gi|256075087|ref|XP_002573852.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044949|emb|CCD82497.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 724
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 13/186 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L++ N P + D+EKL +F + G ++ A V+ + E +S+GFGFV + AE AV+
Sbjct: 194 LYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSE-GKSKGFGFVCFLDPDHAENAVKTM 252
Query: 222 HRYDIDGRLLTVNKAAPRGTQPE---------RAPR--VFEPGFRIYVGNLPWEVDNARL 270
H +I+GR L +A + + E RA R + +YV NL +D+ RL
Sbjct: 253 HGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRL 312
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
E+ FS HG + +A+V+ D RS+GFGFV ++ + A+ ++G + + + V +A
Sbjct: 313 EEAFSVHGSITSAKVMKD-ANNRSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALA 371
Query: 331 EDRQRR 336
+ ++ R
Sbjct: 372 QRKEDR 377
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 99/176 (56%), Gaps = 6/176 (3%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL ++ ++L F G + +++ + E +S+G+GFV E AE+A+E
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMD-ENGQSKGYGFVHFEKEECAERAIEKI 161
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRV-FEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ I R++ V K P+ + +A +V F +Y+ N P E DN +L+++F+E G++
Sbjct: 162 NNMIIRDRVVYVGKFIPKTERKSQARKVKFN---NLYIKNFPPETDNEKLKEMFNEFGEI 218
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+A V+ D E G+S+GFGFV +A+ + G+ ++GRA+ A+ ++ R
Sbjct: 219 KSACVMKDSE-GKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEER 273
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
++ L+VG+L V L F + G V A V + T S G+G+V + AE+A+
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQAL 71
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEH 277
E+ + + GR + + +R P + + G I++ NL ++ L FS
Sbjct: 72 EVLNYESLMGRPIRI-------MWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFF 124
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
G++++ ++V D E G+S+G+GFV E AI ++ + R + V
Sbjct: 125 GRILSCKIVMD-ENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYV 173
>gi|297743097|emb|CBI35964.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLFVG + ++ E F G + + ++ +R T R RGFGF+T + A+K +E
Sbjct: 51 GKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLE 110
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H IDGR + V K PR R +I+VG +P + L+ FS +G
Sbjct: 111 EDHV--IDGRAVEVKKTVPREGMEVRGVSKTR---KIFVGGIPSSLTEDELKDYFSSYGA 165
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
+V +++ D TGRSRGFGFVT SE + + L G+ + + AE ++
Sbjct: 166 IVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEPKR 220
>gi|4938503|emb|CAB43861.1| hnRNP-like protein [Arabidopsis thaliana]
gi|7269517|emb|CAB79520.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 524
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 18/186 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLF+G + +D D E+L F K G + A ++ +R T R+RGFGF+ + AE+ +
Sbjct: 8 GKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI- 66
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQP----ERAP-RVFEPGF----------RIYVGNLPWE 264
++ IDGR + KA PR Q +P + P +I+VG LP
Sbjct: 67 -MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSS 125
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
+ A + F + G + + V+YD T R RGFGF+T SE + D + L+G+
Sbjct: 126 ITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESV-DMVLHKTFHELNGKM 184
Query: 325 IRVNVA 330
+ V A
Sbjct: 185 VEVKRA 190
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G + W+ D RL++ F ++G +V A ++ DR TGR+RGFGF+ + + I
Sbjct: 9 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI-- 66
Query: 315 LDGQNLDGRAIRVNVAEDR 333
+D +DGR + A R
Sbjct: 67 MDKHIIDGRTVEAKKAVPR 85
>gi|159129147|gb|EDP54261.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
A1163]
Length = 608
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 12/176 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V+ V+ + T RSRGFGF+T +
Sbjct: 103 EDGKMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTV 162
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
M + +DG+++ +A PR Q + + +I+VG + E ++ F++
Sbjct: 163 --MVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATEQEFKEFFTQF 212
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G+V++A ++ D++TGR RGFGFVT SE + A++ + G+ I V A+ R
Sbjct: 213 GRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLA--ICGKPIEVKKAQPR 266
>gi|432856226|ref|XP_004068415.1| PREDICTED: ELAV-like protein 4-like [Oryzias latipes]
Length = 439
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 114 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 173
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 174 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 225
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G A I V A +
Sbjct: 226 QYGRIITSRILVDQVTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNP 285
Query: 334 QRRSS 338
+++S
Sbjct: 286 SQKTS 290
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 355 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 414
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 415 ASLNGYRLGDRVLQVSFKTNKTHKS 439
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 358 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 417
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 418 NGYRLGDRVLQV 429
>gi|413954078|gb|AFW86727.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 278
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + ++ E F+K G + + ++ ++ T RGFGFVT S ++ +E
Sbjct: 93 GKVFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLE 152
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H IDGR + V + P+ + P+ +I+VG +P + +L++ FS +GK
Sbjct: 153 DEHV--IDGRTVEVKRTVPKELSSKDGPKTK----KIFVGGIPPSLTEDKLKEHFSSYGK 206
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
VV +++ D TGRSRGFGFVT SE + ++ +L G+ +
Sbjct: 207 VVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQV 252
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
+ P+ K+FVG +P + +KL F G V +++ + T RSRGFGFVT + +
Sbjct: 176 DGPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAV 235
Query: 215 EKAVEMFHRYDIDGRLLT 232
E+ + +D+ G+ +T
Sbjct: 236 ERVMSEGRMHDLGGKQVT 253
>gi|70983602|ref|XP_747328.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|66844954|gb|EAL85290.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|159123666|gb|EDP48785.1| nucleic acid-binding protein [Aspergillus fumigatus A1163]
Length = 324
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++VGNL YDV +E L ++ G VE ++I + SRGF +V ++E A+ VE
Sbjct: 146 VYVGNLFYDVTAEDLKNHMQQFGVVERVDLITDNR-GLSRGFAYVHFDSIEAAKSCVEAM 204
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR-IYVGNLPWEVDNARLEQVFSEHGKV 280
H +GR +T A+ GT+P R P R +Y+GNL +E+ + L ++F + V
Sbjct: 205 HLQIFEGRRITAQYASSGGTRPLR------PASRTLYLGNLSFEMTDRDLNELFRDINNV 258
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
++ RV DR TG+ RGF A L G+ GR IRV+ + +R
Sbjct: 259 IDVRVSVDRRTGQPRGFAHAEFLDVESAQKAFEILSGKAPYGRRIRVDYSSTNRR 313
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 20/211 (9%)
Query: 138 RQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRET 197
R+E E G + +EF +++ N D+D E+L LF+K G +V+ + T
Sbjct: 176 RKEREAELGA-KAKEFTN------VYIKNFGDDMDDERLKELFDKYGKTLSVKVMMD-PT 227
Query: 198 DRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE------ 251
+SRGFGFV+ E+A KAVE + +++G+ + V +A + + R FE
Sbjct: 228 GKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQER 287
Query: 252 ----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 307
G +Y+ NL +D+ +L + FS G + +A+V+ E GRS+GFGFV SS E
Sbjct: 288 ISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EEGRSKGFGFVCFSSPEE 345
Query: 308 LNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
A+ ++G+ + + + V +A+ ++ R +
Sbjct: 346 ATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 95/177 (53%), Gaps = 3/177 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G + +V+ + + S+G+ FV T + A++A+E
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ ++ R + V + R + + +Y+ N ++D+ RL+++F ++GK +
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTL 218
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
+ +V+ D TG+SRGFGFV+ + N A+ ++G L+G+ + V A+ + R +
Sbjct: 219 SVKVMMD-PTGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQA 274
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L D+ AML+EK AG V V + T RS G+ +V S +AE+
Sbjct: 11 ASLYVGDLHPDITE---AMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + +R P + + G +++ NL +DN L FS
Sbjct: 68 ALDTMNFDVVKGKPIRI-------MWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G S+G+ FV ++ + AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-ENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
ERQ E + ++E + + L++ NL +D EKL F G++ A+V+ E
Sbjct: 271 ERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--E 328
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 231
RS+GFGFV S+ EEA KAV +++GR++
Sbjct: 329 EGRSKGFGFVCFSSPEEATKAVT-----EMNGRIV 358
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L ++ A L + FS G V++ RV D T RS G+ +V S DA
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D G+ IR+
Sbjct: 66 ERALDTMNFDVVKGKPIRI 84
>gi|70989777|ref|XP_749738.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
gi|66847369|gb|EAL87700.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
Length = 608
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 12/176 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V+ V+ + T RSRGFGF+T +
Sbjct: 103 EDGKMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTV 162
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
M + +DG+++ +A PR Q + + +I+VG + E ++ F++
Sbjct: 163 --MVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATEQEFKEFFTQF 212
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G+V++A ++ D++TGR RGFGFVT SE + A++ + G+ I V A+ R
Sbjct: 213 GRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLA--ICGKPIEVKKAQPR 266
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 93/184 (50%), Gaps = 6/184 (3%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE---TDRSRGFGFVTMSTVEE 213
P L+VG L V + L +FE G V ++I ++ T + +GFV
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPGA 147
Query: 214 AEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
AE+A++ + I + VN A + + F I+VG+L EV++ L Q
Sbjct: 148 AERAMQTLNGRRIHQSEIRVNWAYQSNSTSKEDTSNH---FHIFVGDLSNEVNDEVLTQA 204
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FS G V ARV++D +TGRSRG+GFV TE + A+ ++DG+ L RAIR N A +
Sbjct: 205 FSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEWLGSRAIRCNWANQK 264
Query: 334 QRRS 337
+ S
Sbjct: 265 GQPS 268
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +V+ E L F G+V A V+++ +T RSRG+GFV EA+KA+
Sbjct: 187 IFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSM 246
Query: 222 HRYDIDGRLLTVNKAAPRGTQ------------------------PERAPRVFE------ 251
+ R + N A +G P + ++
Sbjct: 247 DGEWLGSRAIRCNWANQKGQPSISQQQALVAMGMTPTTAFGHHHFPTHGIQSYDMVAQQT 306
Query: 252 PGFR--IYVGNL-PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
P ++ YVGNL P+ N L +F G V+ R+ DR GF FV M S
Sbjct: 307 PQWQTTCYVGNLTPYTTQN-DLVPLFQNFGYVLETRLQADR------GFAFVKMDSHENA 359
Query: 309 NDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
AI L+G N++GR ++ + +DR F
Sbjct: 360 ASAICQLNGYNVNGRPLKCSWGKDRPPTGQF 390
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 60/84 (71%)
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
E +R +VG L W D+ L+Q FS++G++++A+++ DRETGRSRGFGFVT SE +
Sbjct: 3 ETEYRCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQ 62
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQ 334
AI ++G+ LDGR I VN A+ R+
Sbjct: 63 AIEEMNGKELDGRNITVNEAQSRR 86
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F + G + A++I +RET RSRGFGFVT + E +A+E
Sbjct: 7 RCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 221 FHRYDIDGRLLTVNKAAPR 239
+ ++DGR +TVN+A R
Sbjct: 67 MNGKELDGRNITVNEAQSR 85
>gi|195438186|ref|XP_002067018.1| GK24781 [Drosophila willistoni]
gi|194163103|gb|EDW78004.1| GK24781 [Drosophila willistoni]
Length = 422
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F
Sbjct: 65 LQN-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFGR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E+ + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|291391798|ref|XP_002712349.1| PREDICTED: mCG1035404-like [Oryctolagus cuniculus]
Length = 378
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G + V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHSCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|388580169|gb|EIM20486.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 335
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 99/180 (55%), Gaps = 14/180 (7%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+F+G L +D D + L F K G V ++ + T+RSRGFGF+T ++ + M
Sbjct: 45 KIFIGGLNWDTDEDSLRNYFSKFGNVVQLNIMRDPNTNRSRGFGFLTFDNLQSVQDV--M 102
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF-SEHGK 279
+ +DG+L+ + R + +I+VG +P + ++ + F S G+
Sbjct: 103 IRDHWLDGKLIDPKRNMYRHENFKHK--------KIFVGGIPLTMPVEQVVENFESVFGQ 154
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ-NLDGRAIRVNVAEDRQRRSS 338
V +A ++YD+ETGRSRGFGF+T +E + DA+ +G+ +L+G+++ V + R RS
Sbjct: 155 VTDANLMYDKETGRSRGFGFLTFETEQQAEDAVK--EGRFDLEGKSVEVKRVQTRNERSG 212
>gi|302693014|ref|XP_003036186.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
gi|300109882|gb|EFJ01284.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
Length = 632
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 99/185 (53%), Gaps = 12/185 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L++ N+ +V E+ LF + G V + VI E RSRGFGFV T EEA+KAV+
Sbjct: 229 LYIKNIDPEVTDEEFEALFREQGNV-TSSVIQRDEEGRSRGFGFVNYETHEEAQKAVDNL 287
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ D GR L V++A + + E + E G +YV NL +VD+ +L
Sbjct: 288 NDKDFHGRKLFVSRAQKKAEREEELRKAHEQARLEKLSKYQGLNLYVKNLDDDVDDEKLR 347
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F G + +A+V+ D + G S+GFGFV SS E + A+A ++ + + + + V+ A+
Sbjct: 348 AEFEPFGTITSAKVMRD-DKGVSKGFGFVCYSSPEEASKAVAEMNNKMIGSKPLYVSHAQ 406
Query: 332 DRQRR 336
R+ R
Sbjct: 407 RREVR 411
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 9/183 (4%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P A L+VG L V L +F G V V + T RS G+ +V + E+
Sbjct: 43 PPSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGER 102
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFS 275
A+E + I R R +R P + + G I++ NL ++DN L F+
Sbjct: 103 ALEQLNYSLIKNR-------PCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFA 155
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G V++ +V D E G S+G+GFV + +AI ++G L+ + + V R+
Sbjct: 156 AFGNVLSCKVATD-EHGNSKGYGFVHYETAEAAENAIKNVNGMLLNDKKVYVGHHISRKE 214
Query: 336 RSS 338
R S
Sbjct: 215 RQS 217
>gi|392863540|gb|EJB10655.1| musashi 1, variant [Coccidioides immitis RS]
Length = 608
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 16/178 (8%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V+ V+ + T RSRGFGF+T +
Sbjct: 110 EDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTV 169
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
M + +DG+++ +A PR Q ER ++F VG + + + ++ F +
Sbjct: 170 --MVKEHYLDGKIIDPKRAIPRDEQ-ERTSKIF-------VGGVSQDANEQDFKKFFMQF 219
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLD--GRAIRVNVAEDR 333
G+VV+A ++ D++TGR RGFGFVT SE A+ A Q L+ G+ I V A+ R
Sbjct: 220 GRVVDATLMIDKDTGRPRGFGFVTFDSEA----AVEACLSQPLEILGKPIEVKKAQPR 273
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G L WE + L+ FS+ G+V V+ D TGRSRGFGF+T +N +
Sbjct: 113 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 172
Query: 315 ---LDGQNLDGRAIRVNVAEDRQRRSS 338
LDG+ +D + + D Q R+S
Sbjct: 173 EHYLDGKIID---PKRAIPRDEQERTS 196
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+K+FVG + D + + F + G V A ++ +++T R RGFGFVT ++E AVE
Sbjct: 196 SKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTF----DSEAAVE 251
Query: 220 --MFHRYDIDGRLLTVNKAAPRG 240
+ +I G+ + V KA PRG
Sbjct: 252 ACLSQPLEILGKPIEVKKAQPRG 274
>gi|79325275|ref|NP_001031725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332659833|gb|AEE85233.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 452
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 151 EEFVEPPED-AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
E+ +E D KLF+G + +D D E+L F K G + A ++ +R T R+RGFGF+ +
Sbjct: 2 EQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFA 61
Query: 210 TVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP----ERAP-RVFEPGF---------- 254
AE+ + ++ IDGR + KA PR Q +P + P
Sbjct: 62 DPSVAERVI--MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTK 119
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+I+VG LP + A + F + G + + V+YD T R RGFGF+T SE + D +
Sbjct: 120 KIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESV-DMVLH 178
Query: 315 LDGQNLDGRAIRVNVAEDRQRRSS 338
L+G+ + V A ++ S+
Sbjct: 179 KTFHELNGKMVEVKRAVPKELSST 202
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 20/211 (9%)
Query: 138 RQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRET 197
R+E E G + +EF +++ N D+D E+L LF+K G +V+ + T
Sbjct: 176 RKEREAELGA-KAKEFTN------VYIKNFGDDMDDERLKELFDKYGKTLSVKVMMD-PT 227
Query: 198 DRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE------ 251
+SRGFGFV+ E+A KAVE + +++G+ + V +A + + R FE
Sbjct: 228 GKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQER 287
Query: 252 ----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 307
G +Y+ NL +D+ +L + FS G + +A+V+ E GRS+GFGFV SS E
Sbjct: 288 ISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EEGRSKGFGFVCFSSPEE 345
Query: 308 LNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
A+ ++G+ + + + V +A+ ++ R +
Sbjct: 346 ATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 95/177 (53%), Gaps = 3/177 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G + +V+ + + S+G+ FV T + A++A+E
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVC--DENGSKGYAFVHFETQDAADRAIEKM 158
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ ++ R + V + R + + +Y+ N ++D+ RL+++F ++GK +
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTL 218
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
+ +V+ D TG+SRGFGFV+ + N A+ ++G L+G+ + V A+ + R +
Sbjct: 219 SVKVMMD-PTGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQA 274
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L D+ AML+EK AG V V + T RS G+ +V S +AE+
Sbjct: 11 ASLYVGDLHPDITE---AMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + R +R P + + G +++ NL +DN L FS
Sbjct: 68 ALDTMNFDVVKGKPI-------RIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G S+G+ FV ++ + AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-ENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
ERQ E + ++E + + L++ NL +D EKL F G++ A+V+ E
Sbjct: 271 ERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--E 328
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 231
RS+GFGFV S+ EEA KAV +++GR++
Sbjct: 329 EGRSKGFGFVCFSSPEEATKAVT-----EMNGRIV 358
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L ++ A L + FS G V++ RV D T RS G+ +V S DA
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D G+ IR+
Sbjct: 66 ERALDTMNFDVVKGKPIRI 84
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N ++D EKL LF K G V+ + E +SRGFGFV+ E+A+KAV+
Sbjct: 193 VYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTD-ENGKSRGFGFVSFERHEDAQKAVDEM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ +++G+L+ V +A + + R FE G +YV NL +D+ RL
Sbjct: 252 NGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLR 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 332 DRQRRSS 338
++ R +
Sbjct: 370 RKEERQA 376
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHQDVTE---AMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFDVIKGQPVRIMWS-------QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G S+G+GFV ++ AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L +V A L + FS G +++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D G+ +R+
Sbjct: 66 ERALDTMNFDVIKGQPVRI 84
>gi|118350408|ref|XP_001008485.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila]
gi|89290252|gb|EAR88240.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila SB210]
Length = 325
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 7/172 (4%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+VG L V E L LF + G V + ++ T +G+GFV T E+A+ A+
Sbjct: 11 DATLYVGGLDQKVTQEVLWELFSQCGIVINVHLPRDKITGEHQGYGFVEYKTEEDADYAI 70
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
++ H + G+ + VNKA+ + R E G I++GNL V +L++ FS G
Sbjct: 71 KILHLIKLYGKPIKVNKAS-------QDKRTQEVGANIFIGNLDPSVTEMQLQETFSTFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
++ R+V D + +S+G+ F++ + ++AI+A++GQ + I V A
Sbjct: 124 LIIGRRIVRDSDNNQSKGYAFISYDNFESSDNAISAMNGQYYGSQKISVQYA 175
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+YVG L +V L ++FS+ G V+N + D+ TG +G+GFV +E + + AI L
Sbjct: 14 LYVGGLDQKVTQEVLWELFSQCGIVINVHLPRDKITGEHQGYGFVEYKTEEDADYAIKIL 73
Query: 316 DGQNLDGRAIRVNVAEDRQR 335
L G+ I+VN A +R
Sbjct: 74 HLIKLYGKPIKVNKASQDKR 93
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N ++D EKL LF K G V+ + E +SRGFGFV+ E+A+KAV+
Sbjct: 193 VYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTD-ENGKSRGFGFVSFERHEDAQKAVDEM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ +++G+L+ V +A + + R FE G +YV NL +D+ RL
Sbjct: 252 NGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLR 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 332 DRQRRSS 338
++ R +
Sbjct: 370 RKEERQA 376
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHQDVTE---AMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFDVIKGQPVRIMWS-------QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G S+G+GFV ++ AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L +V A L + FS G +++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D G+ +R+
Sbjct: 66 ERALDTMNFDVIKGQPVRI 84
>gi|365812510|ref|NP_001002172.2| ELAV-like protein 2 [Danio rerio]
Length = 389
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 64 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPKDAE 123
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 124 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 175
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
+ G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 176 QFGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVKFANNP 235
Query: 334 QRRSS 338
++SS
Sbjct: 236 SQKSS 240
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 221 FHRYDIDG--RLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 278
F IDG L +N A GT G+ I+V NL + D L Q+F G
Sbjct: 282 FSPMTIDGVTSLAGINLPAHAGT-----------GWCIFVYNLAPDADENVLWQMFGPFG 330
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 331 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASLNGYRLGDRVLQVSFKTNKTHKA 389
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 308 IFVYNLAPDADENVLWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASL 367
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 368 NGYRLGDRVLQV 379
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 7/184 (3%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGF--GFVTMSTVEEA 214
P L+VG L V + L +FE G V ++I ++ S+G+ GFV A
Sbjct: 87 PNKRALYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAA 146
Query: 215 EKAVEMFHRYDIDGRLLTVNKA-APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
E+A++ + I + VN A T E F I+VG+L EV++ L+Q
Sbjct: 147 ERAMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFH----IFVGDLSNEVNDEILQQA 202
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FS G V ARV++D +TGRSRG+GFV + + A+ ++DG+ L RAIR N A +
Sbjct: 203 FSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSMDGEWLGSRAIRCNWANQK 262
Query: 334 QRRS 337
+ S
Sbjct: 263 GQPS 266
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 89/211 (42%), Gaps = 40/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +V+ E L F G+V A V+++ +T RSRG+GFV +A+KA+
Sbjct: 185 IFVGDLSNEVNDEILQQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSM 244
Query: 222 HRYDIDGRLLTVNKAAPRGT-----QPERAPRVFEP------------GFR--------- 255
+ R + N A +G Q A P G +
Sbjct: 245 DGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQT 304
Query: 256 ------IYVGNL-PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
YVGNL P+ N L +F G V+ R+ DR GF F+ M S
Sbjct: 305 PQWQTTCYVGNLTPYTTQN-DLVPLFQNFGYVLETRLQADR------GFAFIKMDSHENA 357
Query: 309 NDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
AI L+G N++GR ++ + +DR F
Sbjct: 358 AMAICQLNGYNVNGRPLKCSWGKDRPPTGQF 388
>gi|407039916|gb|EKE39893.1| enhancer binding protein-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 12/186 (6%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE---TDRSRGFGFVTMSTVEEAE 215
D LF+ NLP+ + EKL +F K VEI + +R+ ++ G F+T+ T EE +
Sbjct: 112 DNMLFIKNLPFAITEEKLKEMFSKFEVVEITLIKTHRKKGNVTKNNGIAFITVKTAEEQK 171
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG----FRIYVGNLPWEVDNARLE 271
KA+ + ++++GR +TV A + + + EP ++V NLP+ +++ +
Sbjct: 172 KAIAEMNNFEVEGRKITVAAAYKKAENKQTTKKTNEPKSLSETNVFVKNLPFTLNDEGFK 231
Query: 272 QVFSEHGKVVNARVV--YDRETG--RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
++F ++ VV A +V ++++ RS+G+GFVT + + AIA +D ++GR I V
Sbjct: 232 KLFEKYD-VVEATIVKRHNKKLNVDRSKGYGFVTFKTAEQQKKAIAEMDNFEVEGRKITV 290
Query: 328 NVAEDR 333
A R
Sbjct: 291 TSAYQR 296
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 30/194 (15%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+V +L Y + E + F+ E+ I + SRGF F+ +T +EAEKA+EM
Sbjct: 4 LYVSHLDYSLKVEDIQNAFKTYNPKEVK--IISTPIGYSRGFAFIEFATPQEAEKALEM- 60
Query: 222 HRYDIDGRLLTVNKAAPR-GTQPERAPRVFEPGFR---------------------IYVG 259
R I + V KA PR T ER ++ GF+ +++
Sbjct: 61 DRRTIGKMEIKVQKALPREETTTER--KMNRRGFKGKRNTRKRHLVKRTNEVTDNMLFIK 118
Query: 260 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETG---RSRGFGFVTMSSETELNDAIAALD 316
NLP+ + +L+++FS+ V + R+ G ++ G F+T+ + E AIA ++
Sbjct: 119 NLPFAITEEKLKEMFSKFEVVEITLIKTHRKKGNVTKNNGIAFITVKTAEEQKKAIAEMN 178
Query: 317 GQNLDGRAIRVNVA 330
++GR I V A
Sbjct: 179 NFEVEGRKITVAAA 192
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVI--YNRE--TDRSRGFGFVTMSTVEEAEKA 217
+FV NLP+ ++ E LFEK VE A ++ +N++ DRS+G+GFVT T E+ +KA
Sbjct: 216 VFVKNLPFTLNDEGFKKLFEKYDVVE-ATIVKRHNKKLNVDRSKGYGFVTFKTAEQQKKA 274
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPE 244
+ ++++GR +TV A R + E
Sbjct: 275 IAEMDNFEVEGRKITVTSAYQRAEKKE 301
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 5/169 (2%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VGNL V + +A LF + G+V +VI++ D + FV S +A +A++
Sbjct: 44 LYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFDGANDP---YAFVEFSDHAQASQALQTM 100
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
++ + R + VN A G QP + F ++VG+L EVDN +L + F G V
Sbjct: 101 NKRLLLDREMKVNWAVEPGQQPSKIDTTRH--FHVFVGDLSSEVDNQKLREAFQPFGDVS 158
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+A+V+ D T +S+G+GFV+ E AI ++GQ L R IR N A
Sbjct: 159 DAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWA 207
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +VD++KL F+ G V A+VI + T +S+G+GFV+ EEAE+A+E
Sbjct: 133 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 192
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF------------RIYVGNLPWEVDNAR 269
+ + R + N A + E+ E + +YVGN+ +
Sbjct: 193 NGQWLGRRTIRTNWATRKPGDQEKPVHYNEKSYDEIYNQTSGDNTSVYVGNIA-NLSEED 251
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+ Q F+ +G++ R+ + +G+ FV ++ AI ++ Q + G+ +R
Sbjct: 252 IRQAFASYGRISEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRC 303
>gi|194745154|ref|XP_001955057.1| GF18582 [Drosophila ananassae]
gi|190628094|gb|EDV43618.1| GF18582 [Drosophila ananassae]
Length = 357
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 92/189 (48%), Gaps = 10/189 (5%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
++E EP KLF+G L Y E L FEK G + V+ + T RSRGFGF+T
Sbjct: 15 HDDEITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITY 74
Query: 209 ---STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEV 265
S ++EA+K+ + IDGR++ +A PR Q +P +++VG L +
Sbjct: 75 SHSSMIDEAQKS----RPHKIDGRVVEPKRAVPR--QDIDSPNAGATVKKLFVGALKDDH 128
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
D L F G +V+ +V D+ETG+ RGF FV + D + L G+ +
Sbjct: 129 DEQSLRDYFQNFGNIVDINIVMDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQLKGKMV 187
Query: 326 RVNVAEDRQ 334
V A +Q
Sbjct: 188 DVKKALPKQ 196
>gi|390608551|dbj|BAM21252.1| RRM-containing protein [Ephydatia fluviatilis]
Length = 431
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 13/183 (7%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+FVG L + SEKLA F + G V ++ + T RSRGFGF+T K +E
Sbjct: 51 KIFVGGLSWQTSSEKLAEYFARFGEVLECNIMRDPSTRRSRGFGFITFKDPASVSKVLET 110
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAP--RVFEPGF-------RIYVGNLPWEVDNARLE 271
+ I +L P+ P + P +V P + RI+VG L + L+
Sbjct: 111 HAQEPI---VLDDKNIDPKIAVPPKRPGNKVMSPPWTAPSQTKRIFVGGLSSDSTEMDLQ 167
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ F E G + + +++YDR T R RGFGFVT SE + + + ++ ++ G+ + V VA+
Sbjct: 168 EYFQEFGTIQDVQLMYDRNTSRHRGFGFVTFDSE-KPAEKVCSIQYHDIRGKKVEVKVAQ 226
Query: 332 DRQ 334
++
Sbjct: 227 SKE 229
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVE 212
+ P + ++FVG L D L F++ GT++ +++Y+R T R RGFGFVT + +
Sbjct: 143 WTAPSQTKRIFVGGLSSDSTEMDLQEYFQEFGTIQDVQLMYDRNTSRHRGFGFVTFDSEK 202
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKA 236
AEK + +DI G+ + V A
Sbjct: 203 PAEKVCSI-QYHDIRGKKVEVKVA 225
>gi|328724866|ref|XP_003248272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Acyrthosiphon pisum]
Length = 432
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 90/180 (50%), Gaps = 13/180 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L F + G V V+ N E+ RSRGFGFVT +
Sbjct: 11 EQGKLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVV 70
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERA---PRVFEPGFRIYVGNLPWEVDNARLEQV 273
++ + +DGR + PR Q P+R+ P+VF +G LP V L
Sbjct: 71 LQN-GPHVLDGRTIDPKPCNPRTLQKPKRSSSYPKVF-------LGGLPSNVTETDLRTF 122
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FS +GKV+ ++YD+E +SRGFGF++ + + D A NL G+ + + AE R
Sbjct: 123 FSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAV-DRCVAEHFVNLSGKQVEIKKAEPR 181
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN----D 310
+++VG L WE L++ F+ +G+V++ V+ + E+GRSRGFGFVT + +N +
Sbjct: 14 KLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQN 73
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
LDG+ +D + + +R SS+
Sbjct: 74 GPHVLDGRTIDPKPCNPRTLQKPKRSSSY 102
>gi|50305631|ref|XP_452776.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641909|emb|CAH01627.1| KLLA0C12925p [Kluyveromyces lactis]
Length = 570
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 11/174 (6%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+F+G L ++ E L F K G V +++ + T RSRGFGF+T ++ V+
Sbjct: 187 KMFIGGLNWETTEEGLRDYFSKYGAVAEVKIMKDTATGRSRGFGFLTFENASSVDEVVKT 246
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
H +DG+++ +A PR Q + +I+VG + +V E+ FS+ G +
Sbjct: 247 QHI--LDGKVIDPKRAIPREEQDKTG--------KIFVGGIGPDVRPKEFEEFFSQWGSI 296
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
++A+++ D++TGRSRGFGF+T + + D + G+ I + AE RQ
Sbjct: 297 IDAQLMLDKDTGRSRGFGFITYDTPDAV-DRVCQNKFIEFKGKQIEIKRAEPRQ 349
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+FVG + DV ++ F + G++ A+++ +++T RSRGFGF+T T + ++ +
Sbjct: 270 GKIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDTPDAVDRVCQ 329
Query: 220 MFHRY-DIDGRLLTVNKAAPRGTQPERAPRVFEP 252
+++ + G+ + + +A PR Q ++ P++ +P
Sbjct: 330 --NKFIEFKGKQIEIKRAEPRQLQKQKQPQMTQP 361
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 60/81 (74%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ L+ FS++G V++++++ DRETGRSRGFGFVT +S+ + AI
Sbjct: 6 YRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 65
Query: 314 ALDGQNLDGRAIRVNVAEDRQ 334
A++GQ+LDGR I VN A+ R+
Sbjct: 66 AMNGQDLDGRNITVNEAQSRR 86
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D + L F K G V +++I +RET RSRGFGFVT ++ E +A+E
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 221 FHRYDIDGRLLTVNKAAPR 239
+ D+DGR +TVN+A R
Sbjct: 67 MNGQDLDGRNITVNEAQSR 85
>gi|8163877|gb|AAF73892.1|AF224345_1 enhancer binding protein-1 [Entamoeba histolytica]
Length = 247
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 12/186 (6%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE---TDRSRGFGFVTMSTVEEAE 215
D LF+ NLP+ + EKL +F K G VEI + +R+ ++ G F+T+ T EE +
Sbjct: 53 DNMLFIKNLPFAITEEKLKEMFSKFGVVEITLIKTHRKKGNVTKNNGIAFITVKTAEEQK 112
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG----FRIYVGNLPWEVDNARLE 271
KA+ ++++GR +TV A + + + EP ++V NLP+ + + +
Sbjct: 113 KAIAEMDNFEVEGRKITVAAAYKKVENKQTTKKTNEPKSLSETNVFVKNLPFTLTDEGFK 172
Query: 272 QVFSEHGKVVNARVV--YDRETG--RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
++F ++ VV A +V ++++ RS+G+GFVT + + AIA +D ++GR I V
Sbjct: 173 KLFEKYD-VVEATIVKRHNKKLNVDRSKGYGFVTFKTAEQQKKAIAEMDNFEVEGRKITV 231
Query: 328 NVAEDR 333
A R
Sbjct: 232 TSAYQR 237
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVI--YNRE--TDRSRGFGFVTMSTVEEAEKA 217
+FV NLP+ + E LFEK VE A ++ +N++ DRS+G+GFVT T E+ +KA
Sbjct: 157 VFVKNLPFTLTDEGFKKLFEKYDVVE-ATIVKRHNKKLNVDRSKGYGFVTFKTAEQQKKA 215
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPE 244
+ ++++GR +TV A R + E
Sbjct: 216 IAEMDNFEVEGRKITVTSAYQRAEKKE 242
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 93.2 bits (230), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/77 (54%), Positives = 60/77 (77%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R +VG L W DN LE+ FS++G++V+++++ DRETGRSRGFGFVT ++E +ND I A
Sbjct: 7 RCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDVIEA 66
Query: 315 LDGQNLDGRAIRVNVAE 331
++GQ+LDGR I VN A+
Sbjct: 67 MNGQDLDGRNITVNQAQ 83
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D++ L F + G + +++I +RET RSRGFGFVT + + +E
Sbjct: 7 RCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDVIEA 66
Query: 221 FHRYDIDGRLLTVNKA 236
+ D+DGR +TVN+A
Sbjct: 67 MNGQDLDGRNITVNQA 82
>gi|440640661|gb|ELR10580.1| hypothetical protein GMDG_04852 [Geomyces destructans 20631-21]
Length = 447
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 138 RQEESGEE---GVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYN 194
++ ++ +E + + VE LFVGNL +++D E L FE+ G + A VI +
Sbjct: 167 KKRKADDEEETAAKKSKTEVEDTGSKNLFVGNLSWNIDDEWLYREFEEFGEITGARVISD 226
Query: 195 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV------NKAAPRGTQPERAPR 248
RE+ RS+GFG+V + +A A++ IDGR V + AAP+ RA
Sbjct: 227 RESGRSKGFGYVEFANSADAAAALKAKKGALIDGREANVDFSTPRDNAAPKDRANARAQT 286
Query: 249 VFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 304
+ ++VGN+ +E + L + F HG VVN R+ D ++G +GFG++T SS
Sbjct: 287 YGDAKNPESDTLFVGNISFEANEDMLGEAFGAHGTVVNVRLPTDMDSGNPKGFGYITFSS 346
Query: 305 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
+ +A+ + G ++ GR +R++ A R R +
Sbjct: 347 VEDAKNAMENMMGADVGGRPVRLDYATPRPERDA 380
>gi|389623913|ref|XP_003709610.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
gi|351649139|gb|EHA56998.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
Length = 568
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 12/176 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ E L F + G V V+ + T RSRGFGF+T +
Sbjct: 117 EDGKMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVN-- 174
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+ M + +DG+++ +A PR Q + + +I+VG + E + + F++
Sbjct: 175 IVMVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDQEFKDFFAQF 226
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G+VV+A ++ D++TGR RGFGFVT SE + +A A D + + G+ I V A+ R
Sbjct: 227 GRVVDATLMMDKDTGRPRGFGFVTFESEAGV-EACLARDLE-IHGKLIEVKKAQPR 280
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+K+FVG + + ++ F + G V A ++ +++T R RGFGFVT E+E VE
Sbjct: 203 SKIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTF----ESEAGVE 258
Query: 220 MFHRYD--IDGRLLTVNKAAPRGT 241
D I G+L+ V KA PRG
Sbjct: 259 ACLARDLEIHGKLIEVKKAQPRGN 282
>gi|317183317|gb|ADV15462.1| LD46071p [Drosophila melanogaster]
Length = 396
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 95/194 (48%), Gaps = 10/194 (5%)
Query: 144 EEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGF 203
E+ F ++ EP KLF+G L Y E L FEK G + V+ + T RSRGF
Sbjct: 46 EQDDFPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGF 105
Query: 204 GFVTM---STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGN 260
GF+T S ++EA+K+ + IDGR++ +A PR Q +P +++VG
Sbjct: 106 GFITYSHSSMIDEAQKS----RPHKIDGRVVEPKRAVPR--QDIDSPNAGATVKKLFVGA 159
Query: 261 LPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL 320
L + D + F G +V+ +V D+ETG+ RGF FV + D + L
Sbjct: 160 LKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQL 218
Query: 321 DGRAIRVNVAEDRQ 334
+G+ + V A +Q
Sbjct: 219 NGKMVDVKKALPKQ 232
>gi|224082053|ref|XP_002306558.1| predicted protein [Populus trichocarpa]
gi|222856007|gb|EEE93554.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 129 EDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEI 188
+D V E + EE +EEEF +LF N+P++ +E + LF+K GTV
Sbjct: 84 DDVVTEYQSKAEE-------KEEEF----SKTRLFASNVPWNCTAEDIRALFQKFGTVVD 132
Query: 189 AEV-IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 247
E+ +Y++ R+RG FVTM + EEA A+ Y+ +GR L +N A + +P P
Sbjct: 133 VELSMYSK--IRNRGLAFVTMGSPEEAVAALNNLESYEFEGRTLKMNYAKAKKKKPSPPP 190
Query: 248 RVFEPG-FRIYVGNLPWEVDNARLEQVF-SEHGKVVNARVVYDRETGRSRGFGFVTMSSE 305
F ++V NLP+E + L++ F +E VV+A +++ R G+GFV ++
Sbjct: 191 PPKPGPTFNLFVANLPFEAKSKDLKEFFIAEGANVVSAEIIFHDNPRRPSGYGFVAFKTK 250
Query: 306 TELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
E + AI+ + GR +R VA RQ
Sbjct: 251 KEADYAISTFSDKEFMGRQLR--VARSRQ 277
>gi|358372661|dbj|GAA89263.1| C6 transcription factor [Aspergillus kawachii IFO 4308]
Length = 1068
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 7/183 (3%)
Query: 155 EPPEDAK-LFVGNLPYDVDSEKLAMLFEKAGTVE-IAEVIYNRETDRSRGFGFVTMSTVE 212
EPP + +F+GN+ YDV E L EK G VE + V+ NR S+G+G+V +++
Sbjct: 877 EPPTPKETVFIGNIFYDVTREDLKKAMEKYGVVEKVVLVLDNRGI--SKGYGYVQFDSID 934
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
A++AV+ + +GR +TV + A R ++ P +Y+GNLP+E+ + L +
Sbjct: 935 AAQRAVDALNLRLFEGRRVTV-QFAQNNVYHRR--QLNAPTRTLYIGNLPFEMTDRDLNE 991
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
+F + VV+ RV DR TG++RGF S + A+A L+ + GR +R++ ++
Sbjct: 992 LFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAMAVLENKLPYGRRLRLDYSKA 1051
Query: 333 RQR 335
R
Sbjct: 1052 TSR 1054
>gi|159476562|ref|XP_001696380.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158282605|gb|EDP08357.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 396
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 8/174 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
++A ++VGNL E + LF +AG V + +R T+ +G+GFV E+A+ A
Sbjct: 29 QEATVYVGNLDVQTTEELVWELFTQAGPVVNVYMPKDRVTNAHQGYGFVEFKGEEDADYA 88
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA +Q +R V G +++GNL +VD L FS
Sbjct: 89 IKVLNMVKVYGKAIRVNKA----SQDKRQADV---GANLFIGNLDPDVDEKLLYDTFSAF 141
Query: 278 GKVVNA-RVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
G +VN +++ D +TG SRGFGFV+ + AI A++GQ L RAI V+ A
Sbjct: 142 GVIVNTPKIMRDPDTGNSRGFGFVSYDCFEASDAAIEAMNGQYLCNRAITVSYA 195
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+YVGNL + + ++F++ G VVN + DR T +G+GFV E + + AI L
Sbjct: 33 VYVGNLDVQTTEELVWELFTQAGPVVNVYMPKDRVTNAHQGYGFVEFKGEEDADYAIKVL 92
Query: 316 DGQNLDGRAIRVNVAEDRQRRS 337
+ + G+AIRVN A +R++
Sbjct: 93 NMVKVYGKAIRVNKASQDKRQA 114
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGT-VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G V +++ + +T SRGFGFV+ E ++ A+
Sbjct: 118 ANLFIGNLDPDVDEKLLYDTFSAFGVIVNTPKIMRDPDTGNSRGFGFVSYDCFEASDAAI 177
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + + R +TV+ A + T+ ER
Sbjct: 178 EAMNGQYLCNRAITVSYAFKKDTKGER 204
>gi|30681492|ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 159
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F + G V +++I +RET RSRGFGFVT + + A+E
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ D+DGR +TVN+A
Sbjct: 69 MNGQDLDGRSITVNEA 84
>gi|21553354|gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F + G V +++I +RET RSRGFGFVT + + A+E
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ D+DGR +TVN+A
Sbjct: 69 MNGQDLDGRSITVNEA 84
>gi|227204227|dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F + G V +++I +RET RSRGFGFVT + + A+E
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ D+DGR +TVN+A
Sbjct: 69 MNGQDLDGRSITVNEA 84
>gi|15226605|ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|GRP7_ARATH RecName: Full=Glycine-rich RNA-binding protein 7
gi|16226372|gb|AAL16149.1|AF428381_1 At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|330252115|gb|AEC07209.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F + G V +++I +RET RSRGFGFVT + + A+E
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ D+DGR +TVN+A
Sbjct: 69 MNGQDLDGRSITVNEA 84
>gi|444726222|gb|ELW66761.1| Polyadenylate-binding protein 1-like protein [Tupaia chinensis]
Length = 568
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NL DVD L LF + G + +V+ + + SRGFGFV EEA+KA
Sbjct: 164 EFTNIYVKNLQVDVDERGLQDLFSQFGKMLSVKVMRD-SSGHSRGFGFVNFEKHEEAQKA 222
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL V +A R + R FE G +YV NL +++
Sbjct: 223 VVHMNGKEVSGRLLYVGRAQKRLERQNELKRRFEQMKQDRLNRYQGVNLYVKNLDDSIND 282
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 283 EKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 340
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 341 ALAQRKEERKAI 352
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 178 MLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 234
ML+EK AG + V + T RS + ++ +AE+A++ + I G+ + +
Sbjct: 1 MLYEKFSPAGPILSIRVCRDVATRRSLCYAYINFQQPADAERALDTMNFEVIKGQPIRI- 59
Query: 235 KAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 293
+R P + + G I++ NL +DN L FS G +++ +VV D E G
Sbjct: 60 ------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD-EHG- 111
Query: 294 SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
SRGFGFV + AI+ ++G L+ R + V + R+ R
Sbjct: 112 SRGFGFVHFETHDAAQRAISTMNGMLLNDRKVFVGHFKSRRER 154
>gi|395514484|ref|XP_003761447.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Sarcophilus
harrisii]
Length = 347
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 147 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 189
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 47/225 (20%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 183
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPERAPRVFEP 252
+ + +TV A P Q +R R F P
Sbjct: 184 KGLNGQKPPSATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFSR-FSP 242
Query: 253 --------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
G+ I+V NL + D + L Q+F G V N +V+ D T
Sbjct: 243 MTIDGMTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTN 302
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+ +GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 303 KCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA 347
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|384496545|gb|EIE87036.1| hypothetical protein RO3G_11747 [Rhizopus delemar RA 99-880]
Length = 616
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 101/187 (54%), Gaps = 12/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL ++ E+ +F K G + A ++ E +S+GFGF+ E+A KAV+
Sbjct: 222 VYVKNLDESINDEQFKEMFSKFGPITSA-LVQTDEEGKSKGFGFINFENYEDAHKAVDTL 280
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARLE 271
+ + +G+ L V +A + + E + +E G +Y+ NL ++D+ +L
Sbjct: 281 NETEHNGKTLYVARAQKKTEREEELRKQYEQAKLEKLAKYQGVNLYIKNLDDDIDDEKLR 340
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
Q FS +G + +A+V+ D E G S+GFGFV SS E A+ ++G+ + + I V +A+
Sbjct: 341 QEFSVYGVITSAKVMCD-EKGTSKGFGFVCFSSPDEATKAVTEMNGRMIGSKPIYVALAQ 399
Query: 332 DRQRRSS 338
++ R S
Sbjct: 400 RKEVRRS 406
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P A L+VG L V L +F G V V + T RS G+ +V + + E
Sbjct: 35 PSPSASLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNIVDGE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVF 274
+A+E + I G+ + +R P + + G +++ NL +DN L F
Sbjct: 95 RALESLNYTLIKGKPCRI-------MWSQRDPSLRKTGSGNVFIKNLDTSIDNKALHDTF 147
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
S G +++ ++ D E+G S+G+GFV +E ++AI +DG L+ + + V R+
Sbjct: 148 SAFGNILSCKIALD-ESGNSKGYGFVHYETEEAADNAIKHVDGMLLNDKKVYVGRHIPRK 206
Query: 335 RRSS 338
R +
Sbjct: 207 ERQA 210
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G + ++ + E+ S+G+GFV T E A+ A++
Sbjct: 129 VFIKNLDTSIDNKALHDTFSAFGNILSCKIALD-ESGNSKGYGFVHYETEEAADNAIKHV 187
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
++ + + V + PR + + ++ +YV NL +++ + +++FS+ G +
Sbjct: 188 DGMLLNDKKVYVGRHIPRKERQAKIEQIRAKFTNVYVKNLDESINDEQFKEMFSKFGPIT 247
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+A V D E G+S+GFGF+ + + + A+ L+ +G+ + V A+ + R
Sbjct: 248 SALVQTDEE-GKSKGFGFINFENYEDAHKAVDTLNETEHNGKTLYVARAQKKTER 301
>gi|89257506|gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 587
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLF+G + ++ ++L F+ G V A ++ +R T R+RGFGF+ S AE+
Sbjct: 4 ESCKLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFSDPIVAERV 63
Query: 218 VEMFHRYDIDGRLLTVNKAAPR----------GTQPERAPRVFEPGFRIYVGNLPWEVDN 267
V F R+ IDG+L+ KA PR T + +P +I+VG L V
Sbjct: 64 V--FLRHVIDGKLVEAKKAVPRDDHVVLNKSYNTSLQGSPGPANSK-KIFVGGLASSVTE 120
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
A ++ F++ G + + V+YD T R RGFGF++ SE + D + L+G+ + V
Sbjct: 121 AEFKKYFAQFGVITDVVVMYDHRTQRPRGFGFISFESEDAV-DKVLQRTFHELNGKMVEV 179
Query: 328 NVA 330
+A
Sbjct: 180 KLA 182
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P K+FVG L V + F + G + V+Y+ T R RGFGF++ + + +
Sbjct: 103 PANSKKIFVGGLASSVTEAEFKKYFAQFGVITDVVVMYDHRTQRPRGFGFISFESEDAVD 162
Query: 216 KAVE-MFHRYDIDGRLLTVNKAAPR 239
K ++ FH +++G+++ V A P+
Sbjct: 163 KVLQRTFH--ELNGKMVEVKLAVPK 185
>gi|317453642|gb|ADV19029.1| AT02853p [Drosophila melanogaster]
Length = 372
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 148 FEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVT 207
F ++ EP KLF+G L Y E L FEK G + V+ + T RSRGFGF+T
Sbjct: 26 FPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 85
Query: 208 M---STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWE 264
S ++EA+K+ + IDGR++ +A PR Q +P +++VG L +
Sbjct: 86 YSHSSMIDEAQKS----RPHKIDGRVVEPKRAVPR--QDIDSPNAGATVKKLFVGALKDD 139
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
D + F G +V+ +V D+ETG+ RGF FV + D + L+G+
Sbjct: 140 HDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQLNGKM 198
Query: 325 IRVNVAEDRQ 334
+ V A +Q
Sbjct: 199 VDVKKALPKQ 208
>gi|297275666|ref|XP_001094635.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Macaca mulatta]
Length = 407
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L + E L F + G V ++ ++ T++SRGFGFV
Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD-PNCVGT 66
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAP--RVFEPGFR--------IYVGNLPWEVDN 267
V + +DGR + PRG QPER P ++ G R I+VG +P
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTPPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L + F + G V ++YD E R RGFGF+T E ++ A+ + ++ G+ + V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVEV 185
Query: 328 NVAEDRQRRS 337
AE R +S
Sbjct: 186 KRAEPRDSKS 195
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W +N LEQ F+ G+V++++V+ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++G+ LDGR I VN A+
Sbjct: 68 NMNGKELDGRNITVNQAQ 85
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + ++E L F G V ++VI +RET RSRGFGFVT S+ + A+E
Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGKELDGRNITVNQA 84
>gi|117557982|gb|AAI27339.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus (Silurana) tropicalis]
Length = 346
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 34 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 93
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 94 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 145
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 146 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 192
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 47/225 (20%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 123 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 182
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPERAPRVFEP 252
+ + G +TV A P Q +R R F P
Sbjct: 183 KGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFSR-FSP 241
Query: 253 --------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
G+ I+V NL + D + L Q+F G V N +V+ D T
Sbjct: 242 MTIDGMTSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTN 301
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+ +GFGFVTM++ E AIA+L+G L R ++V+ + ++
Sbjct: 302 KCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSKTHKA 346
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 40 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 99
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 100 NGLRLQTKTIKVSYA 114
>gi|17738267|ref|NP_524543.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|24650836|ref|NP_733251.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
gi|133253|sp|P07909.1|ROA1_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=PEN repeat clone P9;
AltName: Full=hnRNP core protein A1-A
gi|157654|gb|AAA28624.1| nulcear ribonucleoprotein [Drosophila melanogaster]
gi|908757|gb|AAA70426.1| unknown protein [Drosophila melanogaster]
gi|7301687|gb|AAF56801.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|23172511|gb|AAN14142.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
Length = 365
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 148 FEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVT 207
F ++ EP KLF+G L Y E L FEK G + V+ + T RSRGFGF+T
Sbjct: 19 FPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 78
Query: 208 M---STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWE 264
S ++EA+K+ + IDGR++ +A PR Q +P +++VG L +
Sbjct: 79 YSHSSMIDEAQKS----RPHKIDGRVVEPKRAVPR--QDIDSPNAGATVKKLFVGALKDD 132
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
D + F G +V+ +V D+ETG+ RGF FV + D + L+G+
Sbjct: 133 HDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQLNGKM 191
Query: 325 IRVNVAEDRQ 334
+ V A +Q
Sbjct: 192 VDVKKALPKQ 201
>gi|315046346|ref|XP_003172548.1| hypothetical protein MGYG_05139 [Arthroderma gypseum CBS 118893]
gi|311342934|gb|EFR02137.1| hypothetical protein MGYG_05139 [Arthroderma gypseum CBS 118893]
Length = 304
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 12/186 (6%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
+P A ++VGN+ +D+ + L K G V +IY+ SRGFG+V +VEEA
Sbjct: 89 DPEPKATIYVGNILFDITAADLKEFASKYGKVLGTRIIYDTR-GLSRGFGYVRFQSVEEA 147
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
+KA++ H + +GR L+VN A R QP++ EP I+VGN+ ++ L
Sbjct: 148 KKAIDEMHLSEYEGRKLSVNFAQIELREEQPQKQ---MEPTRTIFVGNIAHQITERDLHA 204
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA---LDGQNLDGRAIRVNV 329
+F + V + RV DR TG RGF + T++ AIA L GQ GR +R++
Sbjct: 205 IFDDIPNVFDVRVAVDRRTGMPRGF---VHAEFTDVESAIAGFEILKGQAPYGRPLRLDY 261
Query: 330 AEDRQR 335
+ +R
Sbjct: 262 SHSARR 267
>gi|256075089|ref|XP_002573853.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044950|emb|CCD82498.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 688
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 101/186 (54%), Gaps = 13/186 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L++ N P + D+EKL +F + G ++ A V+ + E +S+GFGFV + AE AV+
Sbjct: 194 LYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSE-GKSKGFGFVCFLDPDHAENAVKTM 252
Query: 222 HRYDIDGRLLTVNKAAPR---------GTQPERAPR--VFEPGFRIYVGNLPWEVDNARL 270
H +I+GR L +A + + +RA R + +YV NL +D+ RL
Sbjct: 253 HGKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRL 312
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
E+ FS HG + +A+V+ D RS+GFGFV ++ + A+ ++G + + + V +A
Sbjct: 313 EEAFSVHGSITSAKVMKD-ANNRSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALA 371
Query: 331 EDRQRR 336
+ ++ R
Sbjct: 372 QRKEDR 377
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 99/176 (56%), Gaps = 6/176 (3%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL ++ ++L F G + +++ + E +S+G+GFV E AE+A+E
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMD-ENGQSKGYGFVHFEKEECAERAIEKI 161
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRV-FEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ I R++ V K P+ + +A +V F +Y+ N P E DN +L+++F+E G++
Sbjct: 162 NNMIIRDRVVYVGKFIPKTERKSQARKVKFN---NLYIKNFPPETDNEKLKEMFNEFGEI 218
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+A V+ D E G+S+GFGFV +A+ + G+ ++GRA+ A+ ++ R
Sbjct: 219 KSACVMKDSE-GKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEER 273
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
++ L+VG+L V L F + G V A V + T S G+G+V + AE+A+
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQAL 71
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEH 277
E+ + + GR + R +R P + + G I++ NL ++ L FS
Sbjct: 72 EVLNYESLMGRPI-------RIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFF 124
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
G++++ ++V D E G+S+G+GFV E AI ++ + R + V
Sbjct: 125 GRILSCKIVMD-ENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYV 173
>gi|41054151|ref|NP_956133.1| polyadenylate-binding protein 1-like [Danio rerio]
gi|27881953|gb|AAH44513.1| Zgc:55855 [Danio rerio]
gi|182890236|gb|AAI65470.1| Zgc:55855 protein [Danio rerio]
Length = 620
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
ER+ E G + V E +++ N D+DSEKL +F + G ++ + E
Sbjct: 178 EREAEMGAKAV----------EFTNVYIKNFGEDIDSEKLKNIFTEFGKT-LSVCVMTDE 226
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----- 251
RSRGFGFV +A +AV + +++GR+L V +A R + R FE
Sbjct: 227 RGRSRGFGFVNFVNHGDARRAVTEMNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQE 286
Query: 252 -----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
G +YV NL +D+ +L + F+ +G + +A+V+ D G SRGFGFV SS
Sbjct: 287 RIQRYQGVNLYVKNLDDSIDDEKLRKEFAPYGTITSAKVMTD--GGHSRGFGFVCFSSPE 344
Query: 307 ELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 345 EATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 15/181 (8%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ N+ +D++ L F G + +V+ + + S+G+GFV T E A +A+E
Sbjct: 101 IFIKNMDESIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAANRAIETM 158
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR------IYVGNLPWEVDNARLEQVFS 275
+ ++ R + V G R R E G + +Y+ N ++D+ +L+ +F+
Sbjct: 159 NGMLLNDRKVFV------GHFKSRKEREAEMGAKAVEFTNVYIKNFGEDIDSEKLKNIFT 212
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
E GK ++ V+ D E GRSRGFGFV + + A+ ++G+ L+GR + V A+ R
Sbjct: 213 EFGKTLSVCVMTD-ERGRSRGFGFVNFVNHGDARRAVTEMNGKELNGRVLYVGRAQKRLE 271
Query: 336 R 336
R
Sbjct: 272 R 272
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L DV L F AG + V + T RS G+ ++ +AE A++
Sbjct: 11 ASLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQPADAECALD 70
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I GR + R +R P + + G I++ N+ +DN L FS G
Sbjct: 71 TMNYEVIKGRPI-------RIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +VV D E G S+G+GFV ++ N AI ++G L+ R + V + R+ R
Sbjct: 124 NILSCKVVCD-ENG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKER 179
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 58/81 (71%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE FS +G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAEDRQ 334
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P + + FVG L + D L F G + +++I +RET RSRGFGFVT S+ +
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMR 63
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPR 239
A+E + ++DGR +TVN+A R
Sbjct: 64 DAIEGMNGKELDGRNITVNEAQSR 87
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D EKL LF G V+ + +T +S+GFGFV+ E+A+KAV+
Sbjct: 193 VYIKNFGEDMDDEKLKELFGNYGPALSVRVMTD-DTGKSKGFGFVSFERHEDAQKAVDDM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ +++GR + V +A +G + R FE G +YV NL +D+ RL
Sbjct: 252 NGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLR 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 332 DRQRRSS 338
++ R +
Sbjct: 370 RKEERQA 376
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I GR L + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFDVIKGRPLRIMWS-------QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G S+G+GFV + AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L +V A L + FS G +++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D GR +R+
Sbjct: 66 ERALDTMNFDVIKGRPLRI 84
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 58/81 (71%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE FS +G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAEDRQ 334
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P + + FVG L + D L F G + +++I +RET RSRGFGFVT S+ +
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMR 63
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPR 239
A+E + ++DGR +TVN+A R
Sbjct: 64 DAIEGMNGKELDGRNITVNEAQSR 87
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 58/81 (71%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE FS +G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAEDRQ 334
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P + + FVG L + D L F G + +++I +RET RSRGFGFVT S+ +
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMR 63
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPR 239
A+E + ++DGR +TVN+A R
Sbjct: 64 DAIEGMNGKELDGRNITVNEAQSR 87
>gi|449266230|gb|EMC77309.1| Heterogeneous nuclear ribonucleoprotein A3 like protein 2, partial
[Columba livia]
Length = 356
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 6 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 65
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
+ A+ + +DGR++ +A R + P +I+VG + + + L + F
Sbjct: 66 DAAMSA-RPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYF 122
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
++GK+ V+ DR++G+ RGF FVT + D I ++G V A +Q
Sbjct: 123 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSKQ 181
>gi|344248615|gb|EGW04719.1| ELAV-like protein 2 [Cricetulus griseus]
Length = 347
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 47/225 (20%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPERAPRVFEP 252
+ + G +TV A P Q +R R F P
Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFSR-FSP 242
Query: 253 --------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
G+ I+V NL + D + L Q+F G V N +V+ D T
Sbjct: 243 MTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTN 302
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+ +GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 303 KCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA 347
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|301764847|ref|XP_002917846.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ailuropoda melanoleuca]
Length = 492
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 13/188 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V N D+D E+L +F K G +V+ + +S+GFGFV+ + E A+KAVE
Sbjct: 291 VYVKNFGDDMDDERLKEVFSKYGKTLSVKVMTD-SGGKSKGFGFVSFDSHEAAKKAVEEM 349
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ D++G+LL V +A + + ++FE G ++Y+ NL +D+ +L
Sbjct: 350 NGKDVNGQLLFVGRAQKKSERQAELKQMFEQLKQERFRRCQGMKLYIKNLDDTIDDEKLW 409
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +RV RE GRS+GFG + SS E A+A ++G+ L + + + +A+
Sbjct: 410 REFSSFGSI--SRVKIMREEGRSKGFGLICFSSPEEATKAMAEMNGRILGSKPLYIALAQ 467
Query: 332 DRQRRSSF 339
R +F
Sbjct: 468 RPXERKNF 475
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L DV + L F G V + + T RS G+ +V + +A+KA++
Sbjct: 109 ASLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALD 168
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I G+ + R +R + + G +++ NL +DN L + FS G
Sbjct: 169 TMNFDMIKGKPI-------RLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFG 221
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
K+++++V+ D + SRG+ FV ++ + AI ++G L + V ++R+ R
Sbjct: 222 KILSSKVMSDDQG--SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRKDR 277
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 102/187 (54%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D +KL +F K G V+ + E +SRGFGFV+ E+A++AV+
Sbjct: 193 VYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTD-ENGKSRGFGFVSFERHEDAQRAVDEM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ +++G+L+ V +A + + R FE G +YV NL +D+ RL
Sbjct: 252 NGKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLR 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ D GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KEFSPFGTITSAKVMMD--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 332 DRQRRSS 338
++ R +
Sbjct: 370 RKEERQA 376
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHQDVTE---AMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I GR + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFDVIKGRPVRIMWS-------QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G S+G+GFV ++ AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L +V A L + FS G +++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D GR +R+
Sbjct: 66 ERALDTMNFDVIKGRPVRI 84
>gi|47225636|emb|CAG07979.1| unnamed protein product [Tetraodon nigroviridis]
Length = 382
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 41 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 100
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 101 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 152
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G A I V A +
Sbjct: 153 QYGRIITSRILVDQVTGGSRGVGFIRFDKRVEAEEAIKGLNGQKPSGAAEPITVKFANNP 212
Query: 334 QRRSS 338
+++S
Sbjct: 213 SQKTS 217
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 298 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 357
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 358 ASLNGYRLGDRVLQVSFKTNKTHKS 382
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 301 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 360
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 361 NGYRLGDRVLQV 372
>gi|326428383|gb|EGD73953.1| hypothetical protein PTSG_05647 [Salpingoeca sp. ATCC 50818]
Length = 372
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 87/168 (51%), Gaps = 10/168 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++VG LPY + + L L KAG VE EV+Y+ S+G G V +T E+A+ A+ MF
Sbjct: 169 VYVGGLPYSMTWQHLKDLMRKAGPVEHVEVMYD-GNGMSKGCGLVRFATAEDAQNAIRMF 227
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ +DGR L V A + G ++VGNLPWEV L+ + G+V+
Sbjct: 228 NEQPLDGRNLLVRVDAEADK--------YRRGVSVHVGNLPWEVTWRELKDLMRPAGEVI 279
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
+A V++D G SRG+G V S N AI + GR+I V +
Sbjct: 280 HAEVMHD-NNGLSRGWGIVRFVSADGANAAIEQFNEFEWLGRSITVRL 326
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 20/194 (10%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++VGNL + +L + G V A+V+ + RS+G G V VE A +A+
Sbjct: 60 VYVGNLSWSTTWPRLKEFMSEIGHVAFADVLRD-MNGRSKGCGIVVFGDVETANRAIAEM 118
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR----------------IYVGNLPWEV 265
++DGR + V + P R+ R P R +YVG LP+ +
Sbjct: 119 SGRELDGRQIMVREDREAHRFPRRSARPPAPMHRPSTNYTATFSGEMGSTVYVGGLPYSM 178
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGR-- 323
L+ + + G V + V+YD G S+G G V ++ + +AI + Q LDGR
Sbjct: 179 TWQHLKDLMRKAGPVEHVEVMYD-GNGMSKGCGLVRFATAEDAQNAIRMFNEQPLDGRNL 237
Query: 324 AIRVNVAEDRQRRS 337
+RV+ D+ RR
Sbjct: 238 LVRVDAEADKYRRG 251
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 238 PRGTQP-----ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
P G P R R +PG +YVGNL W RL++ SE G V A V+ D G
Sbjct: 37 PHGGYPMPHGGPRPVRQNQPGTSVYVGNLSWSTTWPRLKEFMSEIGHVAFADVLRD-MNG 95
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
RS+G G V N AIA + G+ LDGR I V EDR+
Sbjct: 96 RSKGCGIVVFGDVETANRAIAEMSGRELDGRQIMVR--EDRE 135
>gi|324509105|gb|ADY43836.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 661
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 14/189 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ N ++D EKL LF K G + V+ + + +S+GFGFV E+AEKAV
Sbjct: 202 VFIKNFADELDKEKLEKLFAKFGKITSCAVMSDAD-GKSKGFGFVAFENPEDAEKAVNEM 260
Query: 222 HRYDI--DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNAR 269
H Y + R L V +A + + R +E G +YV NL VD+
Sbjct: 261 HEYQLPDSERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVDDEV 320
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L Q F +GK+ +A+V+ D + GRS+GFGFV E A+ ++G+ + + + V +
Sbjct: 321 LRQNFESYGKITSAKVMCD-DNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVAL 379
Query: 330 AEDRQRRSS 338
A+ ++ R +
Sbjct: 380 AQRKEDRKA 388
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ + F G + +V N E S+G+GFV T E A+KA+E
Sbjct: 109 IFIKNLDKSIDNKAIYDTFSMFGNILSCKVA-NDEESNSKGYGFVHFETEESAQKAIEKV 167
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ ++G+ + V K PR + +++ N E+D +LE++F++ GK+
Sbjct: 168 NGMLLEGKKVYVGKFQPRAARMREMGETARRFTNVFIKNFADELDKEKLEKLFAKFGKIT 227
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL--DGRAIRVNVAEDRQRRSS 338
+ V+ D + G+S+GFGFV + + A+ + L R + V A+ + RS+
Sbjct: 228 SCAVMSDAD-GKSKGFGFVAFENPEDAEKAVNEMHEYQLPDSERKLYVCRAQKKNERSA 285
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AMLFEK AG V V + T RS G+ +V +AE+
Sbjct: 19 ASLYVGDLHPDVTE---AMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAER 75
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + +R P + G I++ NL +DN + FS
Sbjct: 76 ALDTMNFDVMYGKPIRI-------MWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFS 128
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +V D E+ S+G+GFV +E AI ++G L+G+ + V + R
Sbjct: 129 MFGNILSCKVANDEESN-SKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRAA 187
Query: 336 R 336
R
Sbjct: 188 R 188
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L +V A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 17 PMASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPA---DA 73
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D G+ IR+
Sbjct: 74 ERALDTMNFDVMYGKPIRI 92
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 11/125 (8%)
Query: 113 ADETEGNLSDWGEPEGEDT--VVEAGERQEESGEEGVFEEEEFVEPPE---DAKLFVGNL 167
A++ + ++ P+ E V A ++ E S E E++ VE + L+V NL
Sbjct: 253 AEKAVNEMHEYQLPDSERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNL 312
Query: 168 PYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDID 227
VD E L FE G + A+V+ + + RS+GFGFV +EA KAV +++
Sbjct: 313 DDTVDDEVLRQNFESYGKITSAKVMCD-DNGRSKGFGFVCFEKPDEATKAVT-----EMN 366
Query: 228 GRLLT 232
G+++
Sbjct: 367 GKMMC 371
>gi|440635298|gb|ELR05217.1| hypothetical protein GMDG_01655 [Geomyces destructans 20631-21]
Length = 503
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 13/206 (6%)
Query: 142 SGEEGVF----EEEEFVE--PPEDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIY 193
SGE GV + FV PE K L+VG L V + L +FE G V+ ++I
Sbjct: 63 SGENGVIMSPDSQGRFVRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIP 122
Query: 194 NRETDRSRGF--GFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 251
++ S+GF GFV AE+A++ + + + VN A T +
Sbjct: 123 DKNVGASKGFNYGFVEYDDPGAAERAMQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNH- 181
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
F I+VG+L EV++ L Q F G V ARV++D +TGRSRG+GFV + A
Sbjct: 182 --FHIFVGDLSNEVNDEVLLQAFCAFGSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKA 239
Query: 312 IAALDGQNLDGRAIRVNVAEDRQRRS 337
++++DG+ L RAIR N A + + S
Sbjct: 240 LSSMDGEWLGSRAIRCNWANQKGQPS 265
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 40/205 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +V+ E L F G+V A V+++ +T RSRG+GFV ++AEKA+
Sbjct: 184 IFVGDLSNEVNDEVLLQAFCAFGSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSM 243
Query: 222 HRYDIDGRLLTVNKAAPRGTQ------------------------PERAPRVFE------ 251
+ R + N A +G P + ++
Sbjct: 244 DGEWLGSRAIRCNWANQKGQPSISQQQSMVSTGLTPTTPFGHHHFPTHGVQSYDMIVQQT 303
Query: 252 PGFR--IYVGNL-PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
P ++ +YVGNL P+ N L +F G VV R DR GF FV M +
Sbjct: 304 PQWQTTVYVGNLTPYTTQN-DLVPLFQNFGYVVETRFQSDR------GFAFVKMDTHENA 356
Query: 309 NDAIAALDGQNLDGRAIRVNVAEDR 333
AI L G N++GR ++ + +D+
Sbjct: 357 AMAICQLSGYNVNGRPLKCSWGKDK 381
>gi|402081154|gb|EJT76299.1| hypothetical protein GGTG_06219 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 618
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V V+ + T RSRGFGF+T +
Sbjct: 114 EDGKMFIGGLNWETTDQSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKDPKTVN-- 171
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+ M + +DG+++ +A PR Q + + +I+VG + + + + F++
Sbjct: 172 IVMVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQDTTDQEFKDFFAQF 223
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLD--GRAIRVNVAEDR 333
G+VV+A ++ D++TGR RGFGFVT SE ++ +A Q L+ G+ I V A+ R
Sbjct: 224 GRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLA----QELEIHGKPIEVKKAQPR 277
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 245 RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 304
R P E G ++++G L WE + L + FS+ G+V+ V+ D TGRSRGFGF+T
Sbjct: 108 RGPNSKEDG-KMFIGGLNWETTDQSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKD 166
Query: 305 ETELNDAIAALDGQNLDGRAI--RVNVAEDRQRRSS 338
+N I + LDG+ I + + D Q ++S
Sbjct: 167 PKTVN--IVMVKEHYLDGKIIDPKRAIPRDEQEKTS 200
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+K+FVG + D ++ F + G V A ++ +++T R RGFGFVT + EA
Sbjct: 200 SKIFVGGVSQDTTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFES--EAGVDAC 257
Query: 220 MFHRYDIDGRLLTVNKAAPRGT 241
+ +I G+ + V KA PRG
Sbjct: 258 LAQELEIHGKPIEVKKAQPRGN 279
>gi|397521309|ref|XP_003830739.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan paniscus]
gi|397521311|ref|XP_003830740.1| PREDICTED: ELAV-like protein 2 isoform 3 [Pan paniscus]
gi|397521313|ref|XP_003830741.1| PREDICTED: ELAV-like protein 2 isoform 4 [Pan paniscus]
Length = 346
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 44/223 (19%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPER---APRV 249
+ + G +TV A P Q +R +P
Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPMT 243
Query: 250 FE---------------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 294
+ G+ I+V NL + D + L Q+F G V N +V+ D T +
Sbjct: 244 IDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKC 303
Query: 295 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 304 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA 346
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|194044632|ref|XP_001927442.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Sus scrofa]
Length = 610
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V NL DVD L LF + G + +V+ + ++ SRGFGFV E+A+KA
Sbjct: 189 EFTNIYVKNLHVDVDERCLQDLFSQFGKILSVKVMRD-DSGHSRGFGFVNFEKHEDAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GRLL V +A R + R FE G +YV NL +D+
Sbjct: 248 VTDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + F+ +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 EKLRKEFAPYGMITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + + +R P + + G +++ NL +DN L FS
Sbjct: 68 ALDTMNFEVIKGQPIRIMWS-------QRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D SRGFGFV + +AI ++G L+ R + V + R+
Sbjct: 121 TFGNILSCKVVCDDHG--SRGFGFVHFETHEAAQNAIRTMNGMLLNDRKVFVGHFKSRRE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 252 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 309 NDAIAALDGQNLDGRAIRV 327
A+ ++ + + G+ IR+
Sbjct: 66 ERALDTMNFEVIKGQPIRI 84
>gi|432102762|gb|ELK30241.1| Polyadenylate-binding protein 1-like protein [Myotis davidii]
Length = 603
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 138 RQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRET 197
RQE E GV E ++V NL D+D + L LF + G +V+ + ++
Sbjct: 176 RQEREAELGV-------RAMEFTNVYVKNLQMDIDEQGLEELFSQFGKTLSVKVMRD-DS 227
Query: 198 DRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE------ 251
SRGFGFV EEA+KAV + ++ G+LL V +A + R F+
Sbjct: 228 GHSRGFGFVNFEKHEEAQKAVMDMNGKEVRGQLLYVGRAQKWAERQNELKRKFQQMKQMK 287
Query: 252 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 304
G +YV NL +DN RL + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 288 QDRLNHYQGVNLYVKNLDDSIDNERLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSS 345
Query: 305 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
E A+ ++G L + + V +A+ + R +
Sbjct: 346 PEEATKAVTEMNGCILGTKPLYVALAQRKDERKAI 380
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 16/183 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ ++ +AE
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSLAGPILSIRVCRDVATRRSLGYAYINFQQPADAEL 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + R +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFEVIKGQPI-------RIMWSQRDPGLRKSGVGNIFIKNLEESIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D SRGFGFV + AI+ ++G L+ R + V+ + RQ
Sbjct: 121 TFGNILSCKVVCDDHG--SRGFGFVHFETREAAQQAISTMNGMLLNNRKVFVSHFKSRQE 178
Query: 336 RSS 338
R +
Sbjct: 179 REA 181
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 252 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
PGF +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGFPLASLYVGDLHPDVTEAMLYEKFSLAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 309 NDAIAALDGQNLDGRAIRV 327
A+ ++ + + G+ IR+
Sbjct: 66 ELALDTMNFEVIKGQPIRI 84
>gi|302914266|ref|XP_003051103.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
gi|256732041|gb|EEU45390.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
Length = 546
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 97/178 (54%), Gaps = 7/178 (3%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V V+ + T RSRGFGF+T +
Sbjct: 113 EDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVN-- 170
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERA-PR-VFEPGFRIYVGNLPWEVDNARLEQVFS 275
+ M + +DG++++ + P+ P+RA PR E +I+VG + E + ++ F+
Sbjct: 171 IVMVKEHFLDGKIVSY-RLIPQQIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFA 229
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+ G+VV+A ++ D++TGR RGFGFVT SE ++ I + G+ I V A+ R
Sbjct: 230 QFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACINVP--LEIHGKPIEVKKAQPR 285
>gi|242765445|ref|XP_002340976.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
gi|218724172|gb|EED23589.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
Length = 544
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 16/178 (8%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V V+ + T RSRGFGF+T +
Sbjct: 110 EDGKMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTV 169
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
M + +DG+++ +A PR Q + + +I+VG + E +Q F +
Sbjct: 170 --MVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATEQDFKQFFMQF 219
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLD--GRAIRVNVAEDR 333
G+VV+A ++ D++TGR RGFGFVT SE A+ A + L+ G++I V A+ R
Sbjct: 220 GRVVDATLMIDKDTGRPRGFGFVTFDSEA----AVEATLSRPLEILGKSIEVKKAQPR 273
>gi|37681851|gb|AAQ97803.1| poly(A)-binding protein, cytoplasmic 1 [Danio rerio]
Length = 620
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
ER+ E G + V E +++ N D+DSEKL +F + G ++ + E
Sbjct: 178 EREAEMGAKAV----------EFTNVYIKNFGEDIDSEKLKNIFTEFGKT-LSVCVMTDE 226
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----- 251
RSRGFGFV +A +AV + +++GR+L V +A R + R FE
Sbjct: 227 RGRSRGFGFVNFVNHGDARRAVTEMNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQE 286
Query: 252 -----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
G +YV NL +D+ +L + F+ +G + +A+V+ D G SRGFGFV SS
Sbjct: 287 RIQRYQGVNLYVKNLDDSIDDEKLRKEFAPYGTITSAKVMTD--GGHSRGFGFVCFSSPE 344
Query: 307 ELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 345 EATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 15/181 (8%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ N+ +D++ L F G + +V+ + + S+G+GFV T E A +A+E
Sbjct: 101 IFIKNMDESIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAANRAIETM 158
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR------IYVGNLPWEVDNARLEQVFS 275
+ ++ R + V G R R E G + +Y+ N ++D+ +L+ +F+
Sbjct: 159 NGMLLNDRKVFV------GHFKSRKEREAEMGAKAVEFTNVYIKNFGEDIDSEKLKNIFT 212
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
E GK ++ V+ D E GRSRGFGFV + + A+ ++G+ L+GR + V A+ R
Sbjct: 213 EFGKTLSVCVMTD-ERGRSRGFGFVNFVNHGDARRAVTEMNGKELNGRVLYVGRAQKRLE 271
Query: 336 R 336
R
Sbjct: 272 R 272
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L DV L F AG + V + T RS G+ ++ +AE A++
Sbjct: 11 ASLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQPADAECALD 70
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I GR + R +R P + + G I++ N+ +DN L FS G
Sbjct: 71 TMNYEVIKGRPI-------RIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +VV D E G S+G+GFV ++ N AI ++G L+ R + V + R+ R
Sbjct: 124 NILSCKVVCD-ENG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKER 179
>gi|71051886|gb|AAH99348.1| ElrD protein, partial [Xenopus laevis]
Length = 360
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 36 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 95
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 96 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 147
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G A I V A +
Sbjct: 148 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNP 207
Query: 334 QRRSS 338
+++S
Sbjct: 208 SQKTS 212
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L+ +N GT G+ I+V NL + D + L Q+F
Sbjct: 249 GVKRFSPITIDGMTSLVGMNIPGHTGT-----------GWCIFVYNLSPDSDESVLWQLF 297
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 298 GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKT 357
Query: 335 RRS 337
+S
Sbjct: 358 HKS 360
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 279 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 339 NGYRLGDRVLQV 350
>gi|359067954|ref|XP_002707879.2| PREDICTED: LOW QUALITY PROTEIN: eLAV (embryonic lethal, abnormal
vision, Drosophila)-like 2 (Hu antigen B)-like [Bos
taurus]
Length = 346
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 44/223 (19%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPER---APRV 249
+ + G +TV A P Q +R +P
Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPMT 243
Query: 250 FE---------------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 294
+ G+ I+V NL + D + L Q+F G V N +V+ D T +
Sbjct: 244 IDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKC 303
Query: 295 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+GFGFVTM++ E AIA+L+G L R ++ + ++ ++
Sbjct: 304 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQXSFKTNKTHKA 346
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|126334002|ref|XP_001364932.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Monodelphis
domestica]
Length = 347
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 147 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 189
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 47/225 (20%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 183
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPERAPRVFEP 252
+ + G +TV A P Q +R R F P
Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFSR-FSP 242
Query: 253 --------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
G+ I+V NL + D + L Q+F G V N +V+ D T
Sbjct: 243 MTIDGMTSLAGINIPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTN 302
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+ +GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 303 KCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA 347
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|46592826|ref|NP_997569.1| ELAV-like protein 2 isoform 3 [Mus musculus]
gi|49114392|gb|AAH46598.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 347
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 47/225 (20%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPERAPRVFEP 252
+ + G +TV A P Q +R R F P
Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFSR-FSP 242
Query: 253 --------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
G+ I+V NL + D + L Q+F G V N +V+ D T
Sbjct: 243 MTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTN 302
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+ +GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 303 KCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA 347
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|291401097|ref|XP_002716928.1| PREDICTED: mCG1035404-like isoform 2 [Oryctolagus cuniculus]
Length = 355
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR + +A R + P +I+VG + + + L
Sbjct: 68 DAA--MCARPHKVDGRAVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 123
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G + V A +
Sbjct: 124 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHSCEVKKALSK 182
Query: 334 QRRSS 338
Q S
Sbjct: 183 QEMQS 187
>gi|349732184|ref|NP_001025498.3| ELAV-like protein 2 [Xenopus (Silurana) tropicalis]
gi|288561906|sp|Q28GD4.2|ELAV2_XENTR RecName: Full=ELAV-like protein 2; AltName: Full=Protein ElrB
Length = 375
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 63 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 122
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 123 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 174
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 175 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 221
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 47/225 (20%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 152 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 211
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPERAPRVFEP 252
+ + G +TV A P Q +R R F P
Sbjct: 212 KGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFSR-FSP 270
Query: 253 --------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
G+ I+V NL + D + L Q+F G V N +V+ D T
Sbjct: 271 MTIDGMTSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTN 330
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+ +GFGFVTM++ E AIA+L+G L R ++V+ + ++
Sbjct: 331 KCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSKTHKA 375
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 69 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 128
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 129 NGLRLQTKTIKVSYA 143
>gi|195158385|ref|XP_002020072.1| GL13791 [Drosophila persimilis]
gi|194116841|gb|EDW38884.1| GL13791 [Drosophila persimilis]
Length = 431
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 10/189 (5%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
+++ EP KLF+G L Y + L FEK G + V+ + T RSRGFGF+T
Sbjct: 15 HDDDITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITY 74
Query: 209 S---TVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEV 265
S ++EA+KA + IDGR++ +A PR Q +P +++VG L +
Sbjct: 75 SHSTMIDEAQKA----RPHKIDGRVVEPKRAVPR--QDIDSPNAGATVKKLFVGALKDDH 128
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
D L F G +V+ +V D+ETG+ RGF FV + D + L+G+ +
Sbjct: 129 DEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQLNGKMV 187
Query: 326 RVNVAEDRQ 334
V A +Q
Sbjct: 188 DVKKALPKQ 196
>gi|15020254|gb|AAK74152.1| ELAV-like neuronal protein-3 [Mus musculus]
Length = 348
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 46/225 (20%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183
Query: 219 EMFHRYDIDGRL--LTV----------NKA--------------APRGTQPERAPRVFEP 252
+ + G +TV N+A P Q +R F P
Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRSRFSP 243
Query: 253 --------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
G+ I+V NL + D + L Q+F G V N +V+ D T
Sbjct: 244 MTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTN 303
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+ +GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 304 KCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA 348
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D EKL +F K G V+ + E+ RGFGFV+ E+A+KAV+
Sbjct: 193 VYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTD-ESGGGRGFGFVSFENHEDAQKAVDEM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ +++GR++ V +A + + R FE G +YV NL +D+ RL
Sbjct: 252 NGKELNGRIMFVGRAQKKMERQMELKRRFEQMKQDRTTRYQGVNLYVKNLDDGIDDERLR 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KEFSPFGSITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 332 DRQRRSS 338
++ R +
Sbjct: 370 RKEERQA 376
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHQDVTE---AMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ + + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFDVIKGQPVRIMWS-------QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G SRG+GFV + AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-ENG-SRGYGFVHFETHDAAERAIEKMNGMLLNDRKVFVGRFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
>gi|89266927|emb|CAJ82281.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Xenopus (Silurana) tropicalis]
Length = 374
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 63 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 122
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 123 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 174
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 175 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPG 221
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 44/223 (19%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 152 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 211
Query: 219 EMFH-------------------RYDIDGRLLTVNKAAPR----GTQPERAPRV-FEP-- 252
+ + ++ +L+ +P G ++A R F P
Sbjct: 212 KGLNGQKPPGATEPITVKFANNPSQKVNHTILSQLYQSPNRRYPGPLAQQAQRFRFSPMT 271
Query: 253 ------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 294
G+ I+V NL + D + L Q+F G V N +V+ D T +
Sbjct: 272 IDGMTSLAGINFPGHAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKC 331
Query: 295 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+GFGFVTM++ E AIA+L+G L R ++V+ + ++
Sbjct: 332 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSKTHKA 374
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 69 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 128
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 129 NGLRLQTKTIKVSYA 143
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 58/79 (73%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG L W D+A L F+ G+VV+A+V+ DRETGRSRGFGFV S ET + AI+
Sbjct: 37 KLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAISE 96
Query: 315 LDGQNLDGRAIRVNVAEDR 333
+DG++L+GR IRVN A DR
Sbjct: 97 MDGKDLNGRNIRVNPANDR 115
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 44/84 (52%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLFVG L + D L F G V A+VI +RET RSRGFGFV S A A+
Sbjct: 37 KLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAISE 96
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPE 244
D++GR + VN A R + P
Sbjct: 97 MDGKDLNGRNIRVNPANDRPSAPR 120
>gi|221480563|gb|EEE19030.1| hypothetical protein TGGT1_105690 [Toxoplasma gondii GT1]
gi|221505534|gb|EEE31179.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 430
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLFVG L ++ L F++ G V +EV++++ T RSRGFGF+T +T + + +M
Sbjct: 124 KLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPDPVARVADM 183
Query: 221 FHRYDIDGRLLTVNKAAPR-GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
R+ +DG + V +A PR + P R++VG + +V++ L F +G+
Sbjct: 184 --RHTVDGTQVEVRRAIPREEARDHGGPGADRDAGRLFVGGISDDVNDESLRAYFRHYGE 241
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+ +A V+ DR+ R RGFGFV + + AI +
Sbjct: 242 IQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAIGS 276
>gi|237838585|ref|XP_002368590.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
gi|211966254|gb|EEB01450.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
Length = 430
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLFVG L ++ L F++ G V +EV++++ T RSRGFGF+T +T + + +M
Sbjct: 124 KLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPDPVARVADM 183
Query: 221 FHRYDIDGRLLTVNKAAPR-GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
R+ +DG + V +A PR + P R++VG + +V++ L F +G+
Sbjct: 184 --RHTVDGTQVEVRRAIPREEARDHGGPGADRDAGRLFVGGISDDVNDESLRAYFRHYGE 241
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+ +A V+ DR+ R RGFGFV + + AI +
Sbjct: 242 IQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAIGS 276
>gi|283945529|ref|NP_001164666.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|283945537|ref|NP_001164668.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|386781798|ref|NP_001247929.1| ELAV-like protein 2 [Macaca mulatta]
gi|73971067|ref|XP_865045.1| PREDICTED: ELAV-like protein 2 isoform 2 [Canis lupus familiaris]
gi|296190040|ref|XP_002743027.1| PREDICTED: ELAV-like protein 2 isoform 3 [Callithrix jacchus]
gi|296190042|ref|XP_002743028.1| PREDICTED: ELAV-like protein 2 isoform 4 [Callithrix jacchus]
gi|311245697|ref|XP_003121925.1| PREDICTED: ELAV-like protein 2 isoform 2 [Sus scrofa]
gi|332229735|ref|XP_003264043.1| PREDICTED: ELAV-like protein 2 isoform 1 [Nomascus leucogenys]
gi|332229739|ref|XP_003264045.1| PREDICTED: ELAV-like protein 2 isoform 3 [Nomascus leucogenys]
gi|332831658|ref|XP_003312071.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan troglodytes]
gi|332831662|ref|XP_003312072.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan troglodytes]
gi|338719470|ref|XP_003364010.1| PREDICTED: ELAV-like protein 2 isoform 2 [Equus caballus]
gi|344271095|ref|XP_003407377.1| PREDICTED: ELAV-like protein 2-like [Loxodonta africana]
gi|402897263|ref|XP_003911688.1| PREDICTED: ELAV-like protein 2 isoform 2 [Papio anubis]
gi|402897265|ref|XP_003911689.1| PREDICTED: ELAV-like protein 2 isoform 3 [Papio anubis]
gi|402897267|ref|XP_003911690.1| PREDICTED: ELAV-like protein 2 isoform 4 [Papio anubis]
gi|403272640|ref|XP_003928160.1| PREDICTED: ELAV-like protein 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403272642|ref|XP_003928161.1| PREDICTED: ELAV-like protein 2 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410042502|ref|XP_003951453.1| PREDICTED: ELAV-like protein 2 [Pan troglodytes]
gi|410978370|ref|XP_003995566.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Felis catus]
gi|426220515|ref|XP_004004460.1| PREDICTED: ELAV-like protein 2 isoform 2 [Ovis aries]
gi|426220517|ref|XP_004004461.1| PREDICTED: ELAV-like protein 2 isoform 3 [Ovis aries]
gi|426361463|ref|XP_004047930.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gorilla gorilla gorilla]
gi|426361465|ref|XP_004047931.1| PREDICTED: ELAV-like protein 2 isoform 3 [Gorilla gorilla gorilla]
gi|426361467|ref|XP_004047932.1| PREDICTED: ELAV-like protein 2 isoform 4 [Gorilla gorilla gorilla]
gi|441622584|ref|XP_004088846.1| PREDICTED: ELAV-like protein 2 [Nomascus leucogenys]
gi|21265137|gb|AAH30692.1| ELAVL2 protein [Homo sapiens]
gi|119578985|gb|EAW58581.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|119578986|gb|EAW58582.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|123981428|gb|ABM82543.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|123996267|gb|ABM85735.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|157928304|gb|ABW03448.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|384945702|gb|AFI36456.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|384945704|gb|AFI36457.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|387541444|gb|AFJ71349.1| ELAV-like protein 2 isoform b [Macaca mulatta]
Length = 346
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 44/223 (19%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPER---APRV 249
+ + G +TV A P Q +R +P
Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPMT 243
Query: 250 FE---------------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 294
+ G+ I+V NL + D + L Q+F G V N +V+ D T +
Sbjct: 244 IDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKC 303
Query: 295 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 304 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA 346
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|905387|gb|AAA70417.1| Hel-N2 [Homo sapiens]
Length = 346
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 44/223 (19%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPER---APRV 249
+ + G +TV A P Q +R +P
Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPMT 243
Query: 250 FE---------------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 294
+ G+ I+V NL + D + L Q+F G V N +V+ D T +
Sbjct: 244 IDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKC 303
Query: 295 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+GFGFVTM++ E AI +L+G L R ++V+ ++ ++
Sbjct: 304 KGFGFVTMTNYDEAAMAIRSLNGYRLGDRVLQVSFKTNKTHKA 346
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|402590718|gb|EJW84648.1| polyadenylate-binding protein 4, partial [Wuchereria bancrofti]
Length = 519
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N ++D E L LF K G + A V+ + + +S+GFGFV E+AEKAV
Sbjct: 65 VYIKNFADELDKEALEKLFSKFGKITSAAVMVDAD-GKSKGFGFVAFENPEDAEKAVTEM 123
Query: 222 HRYDIDG--RLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNAR 269
H Y++ G R L V +A + + R +E G +YV NL V++
Sbjct: 124 HEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDDI 183
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L+Q F +GK+ +A+V+ D + GRS+GFGFV E A+ ++G+ + + + V +
Sbjct: 184 LKQNFEAYGKITSAKVMCD-DNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVAL 242
Query: 330 AEDRQRRSS 338
A+ ++ R +
Sbjct: 243 AQRKEDRKA 251
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Query: 192 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 251
+ N E S+G+GFV T E A+KA+E + ++G+ + V K PR +
Sbjct: 1 VANDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRTARLREMGETAR 60
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
+Y+ N E+D LE++FS+ GK+ +A V+ D + G+S+GFGFV + + A
Sbjct: 61 RFTNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDAD-GKSKGFGFVAFENPEDAEKA 119
Query: 312 IAALDGQNLDG--RAIRVNVAEDRQRRSS 338
+ + L G R + V A+ + RS+
Sbjct: 120 VTEMHEYELPGTERKLYVCRAQKKNERSA 148
>gi|348587078|ref|XP_003479295.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cavia porcellus]
Length = 347
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 47/225 (20%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPERAPRVFEP 252
+ + G +TV A P Q +R R F P
Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFSR-FSP 242
Query: 253 --------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
G+ I+V NL + D + L Q+F G V N +V+ D T
Sbjct: 243 MTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTN 302
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+ +GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 303 KCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA 347
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|432103090|gb|ELK30412.1| ELAV-like protein 2 [Myotis davidii]
Length = 416
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 92 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 151
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 152 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 203
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 204 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 250
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 332 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 391
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 392 ASLNGYRLGDRVLQVSFKTNKTHKA 416
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 335 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 394
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 395 NGYRLGDRVLQV 406
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 98 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 157
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 158 NGLRLQTKTIKVSYA 172
>gi|354491615|ref|XP_003507950.1| PREDICTED: ELAV-like protein 2 isoform 3 [Cricetulus griseus]
Length = 356
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 45 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 104
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 105 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 156
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 157 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 203
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 44/223 (19%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 134 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 193
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPER---APRV 249
+ + G +TV A P Q +R +P
Sbjct: 194 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPMT 253
Query: 250 FE---------------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 294
+ G+ I+V NL + D + L Q+F G V N +V+ D T +
Sbjct: 254 IDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKC 313
Query: 295 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 314 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA 356
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 51 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 110
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 111 NGLRLQTKTIKVSYA 125
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 99/183 (54%), Gaps = 11/183 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VGNL + VD L F+ G V A V+ ++++ RSRGFG+V + AEKA
Sbjct: 298 LWVGNLGWGVDDNALYEEFQHVGGVVGARVVTDKDSGRSRGFGYVDFENPDAAEKAYNEK 357
Query: 222 HRYDIDGRLLTVN-------KAAPRGTQPERAPR---VFEP-GFRIYVGNLPWEVDNARL 270
+ + GR + ++ A P ERA + V P ++VGNLP+ D +
Sbjct: 358 NGAFLQGREMRLDFASKPNADAPPSARAAERARKHGDVISPESDTLFVGNLPFSADEDSV 417
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ F++ KV + R+ D+E+GR +GF +VT SS + A L+G +LDGR +R++ A
Sbjct: 418 SKFFNKAAKVQSLRIPTDQESGRPKGFAYVTFSSVEDAKKAFETLNGSDLDGRPVRLDYA 477
Query: 331 EDR 333
+ R
Sbjct: 478 KPR 480
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 53/83 (63%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
PE LFVGNLP+ D + ++ F KA V+ + ++E+ R +GF +VT S+VE+A+K
Sbjct: 398 PESDTLFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRPKGFAYVTFSSVEDAKK 457
Query: 217 AVEMFHRYDIDGRLLTVNKAAPR 239
A E + D+DGR + ++ A PR
Sbjct: 458 AFETLNGSDLDGRPVRLDYAKPR 480
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 105/188 (55%), Gaps = 13/188 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D E+L LF K G +V+ + E+ +S+GFGFV+ E+A+KAV+
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG----------FRIYVGNLPWEVDNARLE 271
+ +++G+ + V +A + + R FE +YV NL ++D+ RL+
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLQ 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KAFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 332 DRQRRSSF 339
++ R ++
Sbjct: 370 RKEERQAY 377
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 15/183 (8%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL ++++ L G + V+ + + S+G+GFV T E AE+A+E
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIEKM 158
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR------IYVGNLPWEVDNARLEQVFS 275
+ ++GR + V G R R E G R +Y+ N ++D+ RL+ +F
Sbjct: 159 NGMLLNGRKVFV------GQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFG 212
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
+ G ++ +V+ D E+G+S+GFGFV+ + A+ ++G+ L+G+ I V A+ +
Sbjct: 213 KFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 336 RSS 338
R +
Sbjct: 272 RQT 274
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T S + +V ++AE
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEH 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ L + + +R P + + G I+V NL ++N L S
Sbjct: 68 ALDTMNFDVIKGKPLRIMWS-------QRDPSLRKSGMGNIFVKNLDKSINNKALYDTVS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ VV D E G S+G+GFV + AI ++G L+GR + V + R+
Sbjct: 121 AFGNILSCNVVCD-ENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
>gi|15020256|gb|AAK74153.1| ELAV-like neuronal protein-2 [Mus musculus]
Length = 347
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 193
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 47/225 (20%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPERAPRVFEP 252
+ + G +TV A P Q +R R F P
Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRR-FSP 242
Query: 253 --------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
G+ I+V NL + D + L Q+F G V N +V+ D T
Sbjct: 243 MTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTN 302
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+ +GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 303 KCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA 347
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|348587076|ref|XP_003479294.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cavia porcellus]
Length = 360
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 276 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 335
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 336 ASLNGYRLGDRVLQVSFKTNKTHKA 360
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 339 NGYRLGDRVLQV 350
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L V LP + E L LF + G V ++I ++ + S G+GFV + EEAE A++
Sbjct: 26 LIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLGYGFVNYGSAEEAEHAIQKM 85
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ ++ + L V+ A P + A +YV NLP ++ L+ +F +G ++
Sbjct: 86 NGTTLESKTLKVSYARPSSVAIKNA--------NVYVANLPPQLSLTELDALFQPYGTII 137
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++V+ D +TG RG GFV T+ AIAAL+G+ L G
Sbjct: 138 TSKVLTDEDTGAGRGVGFVRFDKYTQAEVAIAALNGKQLVG 178
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%)
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
+P + ++V NLP + L Q+FS G + + V+ D ++G + +GFV M S +
Sbjct: 309 DPSYCVFVYNLPETCQDFLLYQLFSPFGAITSVNVIRDLKSGLCKRYGFVNMKSYEDACS 368
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQ 334
AI L+G DG+ ++V+ ++
Sbjct: 369 AIMTLNGYVHDGKTLQVSFKNQKK 392
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+Q+FS+ G V++ +++ D+ +G S G+GFV S E AI +
Sbjct: 26 LIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLGYGFVNYGSAEEAEHAIQKM 85
Query: 316 DGQNLDGRAIRVNVA 330
+G L+ + ++V+ A
Sbjct: 86 NGTTLESKTLKVSYA 100
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NLP L LF G + VI + ++ + +GFV M + E+A A+
Sbjct: 314 VFVYNLPETCQDFLLYQLFSPFGAITSVNVIRDLKSGLCKRYGFVNMKSYEDACSAIMTL 373
Query: 222 HRYDIDGRLLTV 233
+ Y DG+ L V
Sbjct: 374 NGYVHDGKTLQV 385
>gi|326922673|ref|XP_003207572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Meleagris gallopavo]
Length = 378
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 28 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 87
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
+ A+ + +DGR++ +A R + P +I+VG + + + L + F
Sbjct: 88 DAAMSA-RPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYF 144
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
++GK+ V+ DR++G+ RGF FVT + D I ++G V A +Q
Sbjct: 145 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSKQ 203
>gi|297836592|ref|XP_002886178.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
gi|297332018|gb|EFH62437.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 96/177 (54%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+DA ++VGNL + E L LF +AG V V +R T+ + +GF+ + E+A+ A
Sbjct: 23 QDATVYVGNLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYA 82
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+++ + + G+ + VNKA+ + + + G +++GNL +VD L FS
Sbjct: 83 IKVLNMIKVHGKPIRVNKAS-------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
Query: 278 GKVV-NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G + N +++ D +TG SRGFGF++ S + AI A+ GQ L R I V+ A +
Sbjct: 136 GVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMTGQYLSNRQITVSYAYKK 192
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+YVGNL ++ L ++F + G VVN V DR T + +GF+ SE + + AI L
Sbjct: 27 VYVGNLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKVL 86
Query: 316 DGQNLDGRAIRVNVAEDRQR 335
+ + G+ IRVN A ++
Sbjct: 87 NMIKVHGKPIRVNKASQDKK 106
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEI-AEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
A LF+GNL DVD + L F G + +++ + +T SRGFGF++ + E ++ A+
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
Query: 219 EMFHRYDIDGRLLTVNKAAPRGTQPER 245
E + R +TV+ A + T+ ER
Sbjct: 172 EAMTGQYLSNRQITVSYAYKKDTKGER 198
>gi|195353064|ref|XP_002043030.1| GM16385 [Drosophila sechellia]
gi|194127095|gb|EDW49138.1| GM16385 [Drosophila sechellia]
Length = 363
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 148 FEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVT 207
F ++ EP KLF+G L Y E L FEK G + V+ + T RSRGFGF+T
Sbjct: 17 FAQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 76
Query: 208 M---STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWE 264
S ++EA+K+ + IDGR++ +A PR Q +P +++VG L +
Sbjct: 77 YSHSSMIDEAQKS----RPHKIDGRVVEPKRAVPR--QDIDSPNAGATVKKLFVGALKDD 130
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
D + F G +V+ +V D+ETG+ RGF FV + D + L+G+
Sbjct: 131 HDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQLNGKM 189
Query: 325 IRVNVAEDRQ 334
+ V A +Q
Sbjct: 190 VDVKKALPKQ 199
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D EKL LF K G V+ + + +S+GFGFV+ E+A+KAV+
Sbjct: 193 VYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-DGGKSKGFGFVSFERHEDAQKAVDDM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ +++GR + V +A +G + R FE G +YV NL +D+ RL
Sbjct: 252 NGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLR 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 332 DRQRRSS 338
++ R +
Sbjct: 370 RKEERQA 376
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I GR L + + +R P + + G I++ NL +DN L FS
Sbjct: 68 ALDTMNFDVIKGRPLRIMWS-------QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +VV D E G S+G+GFV + AI ++G L+ R + V + R+
Sbjct: 121 AFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L +V A L + FS G +++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D GR +R+
Sbjct: 66 ERALDTMNFDVIKGRPLRI 84
>gi|328724864|ref|XP_001951157.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Acyrthosiphon pisum]
Length = 442
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 90/180 (50%), Gaps = 13/180 (7%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L F + G V V+ N E+ RSRGFGFVT +
Sbjct: 11 EQGKLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVV 70
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERA---PRVFEPGFRIYVGNLPWEVDNARLEQV 273
++ + +DGR + PR Q P+R+ P+VF +G LP V L
Sbjct: 71 LQN-GPHVLDGRTIDPKPCNPRTLQKPKRSSSYPKVF-------LGGLPSNVTETDLRTF 122
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FS +GKV+ ++YD+E +SRGFGF++ + + D A NL G+ + + AE R
Sbjct: 123 FSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAV-DRCVAEHFVNLSGKQVEIKKAEPR 181
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN----D 310
+++VG L WE L++ F+ +G+V++ V+ + E+GRSRGFGFVT + +N +
Sbjct: 14 KLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQN 73
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
LDG+ +D + + +R SS+
Sbjct: 74 GPHVLDGRTIDPKPCNPRTLQKPKRSSSY 102
>gi|432118841|gb|ELK38215.1| Polyadenylate-binding protein 5 [Myotis davidii]
Length = 382
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 13/184 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV N +VD EKL +F + G E +VI + + +S+GFGFV T E A+KAV
Sbjct: 201 VFVKNFGDEVDDEKLKEIFSEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
H IDG+ L V +A + + R FE PG +Y+ NL +D+ +L
Sbjct: 260 HGKSIDGKALYVGRAQKKIERLAELRRRFERLKVKEKSRPPGVPVYIKNLDETIDDEKLR 319
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + A+V+ E G+ +GFG V SS E A+ ++G+ + + + V + +
Sbjct: 320 EEFSSFGSISRAKVMV--EVGQGKGFGVVCFSSFEEATKAVGEMNGRMVGSKPLHVTLGQ 377
Query: 332 DRQR 335
R+R
Sbjct: 378 ARRR 381
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D+ L LF G + +V+ + + S+G+ +V ++ A +A+
Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFDSLAAANRAIWHM 165
Query: 222 HRYDIDGRLLTVNKAA-PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
+ ++ R + V + P E R ++V N EVD+ +L+++FSE+G
Sbjct: 166 NGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNFGDEVDDEKLKEIFSEYGPT 225
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+ +V+ D +G+S+GFGFV + A+ L G+++DG+A+ V A+ + R
Sbjct: 226 ESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKALYVGRAQKKIER 280
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 8/164 (4%)
Query: 164 VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHR 223
VG+L DV + L F AG + + + ET G+G+V +AE A+ +
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPETRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 224 YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNA 283
I+G+ + +QP+ R G I++ NL +DN L +FS G +++
Sbjct: 82 DLINGKPFRL-----MWSQPDDRLRKSGVG-NIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 284 RVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+VV D + G S+G+ +V S N AI ++G L+ R + V
Sbjct: 136 KVVCD-DNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV 177
>gi|50286689|ref|XP_445774.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525080|emb|CAG58693.1| unnamed protein product [Candida glabrata]
Length = 452
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 11/175 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+F+G L ++ + L F K G VE +++ + T RSRGFGF+T + ++ V+
Sbjct: 122 CKMFIGGLNWETTEDGLRDYFSKYGKVEELKIMKDPATGRSRGFGFLTFESASSVDEVVK 181
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H +DG+++ +A PR Q + +I+VG + +V E+ F++ G
Sbjct: 182 TQHI--LDGKVIDPKRAIPREEQDKTG--------KIFVGGIGPDVRPKEFEEFFAQWGT 231
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
+++A+++ D++TGRSRGFGF+T + + D + + GR I + A R
Sbjct: 232 IIDAQLMLDKDTGRSRGFGFITYDTPDAV-DKVCQNKFIDFKGRKIEIKRAAPRH 285
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 58/78 (74%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
FR +VG L W D+ L++ FS +G+VV ++++ DRETGRSRGFGFVT + E + DAI
Sbjct: 8 FRCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAID 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
A++G+ LDGR+I VN A+
Sbjct: 68 AMNGKMLDGRSITVNPAQ 85
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F G V +++I +RET RSRGFGFVT + + A++
Sbjct: 9 RCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAIDA 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ +DGR +TVN A
Sbjct: 69 MNGKMLDGRSITVNPA 84
>gi|255582445|ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 484
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 18/185 (9%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
++ KLF+G + +D + E+L F G V A ++ +R T R+RGFGFV + AE+
Sbjct: 4 DNGKLFIGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVAERV 63
Query: 218 VEMFHRYDIDGRLLTVNKAAPR----------GTQPERAPRVFEPG--FRIYVGNLPWEV 265
+ +++IDGR++ KA PR G+ +P PG +I+VG L V
Sbjct: 64 I--MEKHNIDGRMVEAKKAVPRDDQNILNRSTGSSIHGSP---GPGRTRKIFVGGLASTV 118
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
+ F ++G + + V+YD T R RGFGF+T SE E D + L+G+ +
Sbjct: 119 TETDFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSE-EAVDKVLMKTFHELNGKMV 177
Query: 326 RVNVA 330
V A
Sbjct: 178 EVKRA 182
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P K+FVG L V FE+ GT+ V+Y+ T R RGFGF+T + E +
Sbjct: 103 PGRTRKIFVGGLASTVTETDFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVD 162
Query: 216 KAV-EMFHRYDIDGRLLTVNKAAPR--GTQPERAP 247
K + + FH +++G+++ V +A P+ P R+P
Sbjct: 163 KVLMKTFH--ELNGKMVEVKRAVPKELSPGPSRSP 195
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G + W+ + RL++ F G+VV A ++ DR TGR+RGFGFV + I
Sbjct: 7 KLFIGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVAERVI-- 64
Query: 315 LDGQNLDGRAIRVNVAEDR 333
++ N+DGR + A R
Sbjct: 65 MEKHNIDGRMVEAKKAVPR 83
>gi|119578988|gb|EAW58584.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_c [Homo sapiens]
Length = 360
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 49 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 108
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 109 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 160
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 161 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 207
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 44/223 (19%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 138 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 197
Query: 219 EMFHRYDIDGRL--LTV----------NKA--------------APRGTQPER---APRV 249
+ + G +TV N+A P Q +R +P
Sbjct: 198 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPMT 257
Query: 250 FE---------------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 294
+ G+ I+V NL + D + L Q+F G V N +V+ D T +
Sbjct: 258 IDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKC 317
Query: 295 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 318 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA 360
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 55 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 114
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 115 NGLRLQTKTIKVSYA 129
>gi|354491613|ref|XP_003507949.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cricetulus griseus]
Length = 360
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 276 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 335
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 336 ASLNGYRLGDRVLQVSFKTNKTHKA 360
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 339 NGYRLGDRVLQV 350
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|351709863|gb|EHB12782.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 392
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 94 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 153
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 154 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 209
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 210 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 268
Query: 334 QRRSS 338
Q S
Sbjct: 269 QEMQS 273
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 31/180 (17%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGF FVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFDFVTYSCVEEG 89
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
E PE+ ++F +G L +E + L + F
Sbjct: 90 HDPKE-----------------------PEQLRKLF-------IGGLSFETTDDSLREHF 119
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
+ G + + V+ D +T RSRGFGFVT S E++ A+ A +DGR + A R+
Sbjct: 120 EKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARP-HKVDGRVVEPKRAVSRE 178
>gi|608543|gb|AAA96945.1| ribonucleoprotein [Xenopus laevis]
Length = 366
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G A I V A +
Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNP 213
Query: 334 QRRSS 338
+++S
Sbjct: 214 SQKTS 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L+ +N GT G+ I+V NL + D + L Q+F
Sbjct: 255 GVKRFSPITIDGMTSLVGMNIPGHTGT-----------GWCIFVYNLSPDSDESVLWQLF 303
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 304 GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKT 363
Query: 335 RRS 337
+S
Sbjct: 364 HKS 366
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 345 NGYRLGDRVLQV 356
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 105/188 (55%), Gaps = 13/188 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D E+L LF K G +V+ + E+ +S+GFGFV+ E+A+KAV+
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG----------FRIYVGNLPWEVDNARLE 271
+ +++G+ + V +A + + R FE +YV NL ++D+ RL+
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLQ 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 312 KAFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 332 DRQRRSSF 339
++ R ++
Sbjct: 370 RKEERQAY 377
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 15/183 (8%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL ++++ L G + V+ + + S+G+GFV T E AE+A+E
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIEKM 158
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR------IYVGNLPWEVDNARLEQVFS 275
+ ++GR + V G R R E G R +Y+ N ++D+ RL+ +F
Sbjct: 159 NGMLLNGRKVFV------GQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFG 212
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
+ G ++ +V+ D E+G+S+GFGFV+ + A+ ++G+ L+G+ I V A+ +
Sbjct: 213 KFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 336 RSS 338
R +
Sbjct: 272 RQT 274
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AML+EK AG + V + T S + +V ++AE
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEH 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I G+ L + + +R P + + G I+V NL ++N L S
Sbjct: 68 ALDTMNFDVIKGKPLRIMWS-------QRDPSLRKSGMGNIFVKNLDKSINNKALYDTVS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ VV D E G S+G+GFV + AI ++G L+GR + V + R+
Sbjct: 121 AFGNILSCNVVCD-ENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKE 178
Query: 336 R 336
R
Sbjct: 179 R 179
>gi|296484904|tpg|DAA27019.1| TPA: ELAV-like 2-like [Bos taurus]
Length = 620
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 309 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 368
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 369 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 420
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 421 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 467
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 46/225 (20%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A
Sbjct: 397 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEA 456
Query: 218 VEMFHRYDIDGRL--LTV----------------------NKAAPRGTQPERAPRV-FEP 252
++ + G +TV N+ P G ++A R F P
Sbjct: 457 IKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYP-GPLAQQAQRFRFSP 515
Query: 253 --------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
G+ I+V NL + D + L Q+F G V N +V+ D T
Sbjct: 516 MTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTN 575
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+ +GFGFVTM++ E AIA+L+G L R ++ + ++ ++
Sbjct: 576 KCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQXSFKTNKTHKA 620
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 315 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 374
Query: 316 DGQNLDGRAIRVNVAE 331
+G L + I+V+ A
Sbjct: 375 NGLRLQTKTIKVSYAR 390
>gi|395837290|ref|XP_003791571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Otolemur
garnettii]
Length = 347
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 68 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 123
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 124 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 182
Query: 334 QRRSS 338
Q S
Sbjct: 183 QEMQS 187
>gi|126334000|ref|XP_001364864.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Monodelphis
domestica]
Length = 360
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 147 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 189
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 276 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 335
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 336 ASLNGYRLGDRVLQVSFKTNKTHKA 360
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 339 NGYRLGDRVLQV 350
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 5/169 (2%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VGNL V + +A LF + G+V +VI++ D + FV +A +A++
Sbjct: 46 LYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFDGANDP---YAFVEFLDHSQASQALQTM 102
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
++ + R + VN A G QP + F ++VG+L EVDN +L + F G V
Sbjct: 103 NKRLLLDREMKVNWAVEPGQQPSKVDTTRH--FHVFVGDLSSEVDNQKLREAFQPFGDVS 160
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+A+V+ D T +S+G+GFV+ E AI ++GQ L R IR N A
Sbjct: 161 DAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWA 209
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +VD++KL F+ G V A+VI + T +S+G+GFV+ EEAE+A+E
Sbjct: 135 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 194
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF------------RIYVGNLPWEVDNAR 269
+ + R + N A + E+ E F +YVGN+ +
Sbjct: 195 NGQWLGRRTIRTNWATRKPGDQEKPTHYNEKSFDEIYNQTSGDNTSVYVGNIA-NLSEDE 253
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+ Q F+ +G++ R+ + +G+ FV ++ AI ++ Q + G+ +R
Sbjct: 254 IRQAFASYGRISEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRC 305
>gi|218200393|gb|EEC82820.1| hypothetical protein OsI_27609 [Oryza sativa Indica Group]
Length = 164
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 196 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP-----RGTQPERAP--- 247
ET SRG GFVTM ++ EA A+ +D+DGR + V ++ R P
Sbjct: 15 ETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSDVVSKRRNINMTHTPPVK 74
Query: 248 -RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 306
+FE +IYVGN+ W V+ L + FS+ G VV+ R++ DR+ GR R +GF++ +S
Sbjct: 75 DHIFESPHKIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFASAE 134
Query: 307 ELNDAIAALDGQNLDGRAIRVNVA-EDRQRR 336
EL A+ LD + GR I V A E+RQ R
Sbjct: 135 ELEAAL-KLDNTHFHGRNILVRQAHEERQAR 164
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%)
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
N ++ D ETG SRG GFVTM S E A+ ALDG +LDGR + V ++ D
Sbjct: 7 NPQISRDPETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSD 57
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMS 209
++ E P K++VGN+ + V+ ++L F + GTV ++ +R+ R R +GF++ +
Sbjct: 74 KDHIFESPH--KIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFLSFA 131
Query: 210 TVEEAEKAVEM----FHRYDIDGRLLTVNKA 236
+ EE E A+++ FH GR + V +A
Sbjct: 132 SAEELEAALKLDNTHFH-----GRNILVRQA 157
>gi|363744747|ref|XP_001233484.2| PREDICTED: ELAV-like protein 2 isoform 1 [Gallus gallus]
Length = 345
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP + E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 34 EDSKTNLIVNYLPQSMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAE 93
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 94 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 145
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 146 QYGRIITSRILVDQVTGMSRGVGFIRFDKRIEAEEAIKGLNGQ 188
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 66/234 (28%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 123 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGMSRGVGFIRFDKRIEAEEAI 182
Query: 219 ---------------------------------EMFH----RY----------------D 225
+++H RY
Sbjct: 183 KGLNGQKPPAATEPITVKFANNPSQKTNQAILSQLYHSPNRRYPAPLAQQAQRFRFPPMT 242
Query: 226 IDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNA 283
IDG L +N GT G+ I+V NL + D + L Q+F G V N
Sbjct: 243 IDGMTSLAGINIPGHAGT-----------GWCIFVYNLAPDADESILWQMFGPFGAVTNV 291
Query: 284 RVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 292 KVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA 345
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 40 LIVNYLPQSMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTL 99
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 100 NGLRLQTKTIKVSYA 114
>gi|291383147|ref|XP_002708097.1| PREDICTED: ELAV-like 2-like isoform 2 [Oryctolagus cuniculus]
Length = 376
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 64 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 123
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 124 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 175
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 176 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 222
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 47/225 (20%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 153 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 212
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPERAPRVFEP 252
+ + G +TV A P Q +R R F P
Sbjct: 213 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFSR-FSP 271
Query: 253 --------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
G+ I+V NL + D + L Q+F G V N +V+ D T
Sbjct: 272 MTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTN 331
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+ +GFGFVTM++ E AIA+L+G L R ++V+ ++ ++
Sbjct: 332 KCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA 376
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 70 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 129
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 130 NGLRLQTKTIKVSYA 144
>gi|62739311|gb|AAH94189.1| Elavl2-a protein [Xenopus laevis]
Length = 359
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 33 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 92
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 93 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 144
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 145 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 187
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 275 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 334
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ + ++
Sbjct: 335 ASLNGYRLGDRVLQVSFKTSKTHKA 359
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 338 NGYRLGDRVLQV 349
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 39 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 98
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 99 NGLRLQTKTIKVSYA 113
>gi|295424162|ref|NP_001171354.1| ELAV-like protein 2 isoform 4 [Mus musculus]
gi|74206254|dbj|BAE24886.1| unnamed protein product [Mus musculus]
gi|149044490|gb|EDL97749.1| rCG53485, isoform CRA_a [Rattus norvegicus]
Length = 359
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 275 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 334
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 335 ASLNGYRLGDRVLQVSFKTNKTHKA 359
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 338 NGYRLGDRVLQV 349
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|410978372|ref|XP_003995567.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Felis catus]
Length = 360
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 276 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 335
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 336 ASLNGYRLGDRVLQVSFKTNKTHKA 360
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 339 NGYRLGDRVLQV 350
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|397521307|ref|XP_003830738.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan paniscus]
Length = 359
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 275 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 334
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 335 ASLNGYRLGDRVLQVSFKTNKTHKA 359
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 338 NGYRLGDRVLQV 349
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E ++V N D+D E L LF + G +V+ + E +SRGFGFV EEA+KA
Sbjct: 189 EFTNIYVKNFEGDMDDECLQELFSQFGKTLSVKVMVD-ENGQSRGFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + ++ GR+L V +A R + R FE G +YV NL +D+
Sbjct: 248 VSNMNGKELGGRVLYVGRAQKRSERQSELKRRFEQMKQERVNRYQGVNLYVKNLDDIIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
+L + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 EKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L DV L F AG + V + T RS G+ ++ +AE+A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I GR + R +R P + + G I++ NL +DN L FS G
Sbjct: 71 TMNFEVIKGRPI-------RIMWSQRDPGLRKSGIGNIFIKNLDDSIDNKALYDTFSTFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +VV D E G SRGFGFV + N AI ++G L+ R + V + RQ R
Sbjct: 124 NILSCKVVCD-ENG-SRGFGFVHFETHEAANQAINTMNGMLLNDRKVFVGHFKSRQER 179
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 19/152 (12%)
Query: 91 TITLEQEQEENGEEE----PNWENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEG 146
T++++ +ENG+ N+E +E + +S+ E V+ G Q+ S +
Sbjct: 217 TLSVKVMVDENGQSRGFGFVNFEKH--EEAQKAVSNMNGKELGGRVLYVGRAQKRSERQS 274
Query: 147 VFE------EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRS 200
+ ++E V + L+V NL +D EKL F G + A+V+ E S
Sbjct: 275 ELKRRFEQMKQERVNRYQGVNLYVKNLDDIIDDEKLRKEFSPYGVITSAKVM--TEGGHS 332
Query: 201 RGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 232
+GFGFV S+ EEA KAV +++GR+++
Sbjct: 333 KGFGFVCFSSPEEATKAVT-----EMNGRIVS 359
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 252 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 309 NDAIAALDGQNLDGRAIRV 327
A+ ++ + + GR IR+
Sbjct: 66 ERALDTMNFEVIKGRPIRI 84
>gi|354491611|ref|XP_003507948.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cricetulus griseus]
Length = 359
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 275 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 334
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 335 ASLNGYRLGDRVLQVSFKTNKTHKA 359
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 338 NGYRLGDRVLQV 349
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|408396972|gb|EKJ76123.1| hypothetical protein FPSE_03598 [Fusarium pseudograminearum CS3096]
Length = 546
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 12/176 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ + L F + G V V+ + T RSRGFGF+T +
Sbjct: 118 EDGKMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVN-- 175
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+ M + +DG+++ +A PR Q + + +I+VG + E + ++ F++
Sbjct: 176 IVMVKEHFLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDQEFKEYFAQF 227
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G+VV+A ++ D++TGR RGFGFVT +E ++ I + G+ I V A+ R
Sbjct: 228 GRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACINVP--LEIHGKPIEVKKAQPR 281
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G L WE + L F++ G+VV V+ D TGRSRGFGF+T +N I
Sbjct: 121 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVN--IVM 178
Query: 315 LDGQNLDGRAI--RVNVAEDRQRRSS 338
+ LDG+ I + + D Q ++S
Sbjct: 179 VKEHFLDGKIIDPKRAIPRDEQEKTS 204
>gi|389748929|gb|EIM90106.1| polyadenylate binding protein [Stereum hirsutum FP-91666 SS1]
Length = 682
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 12/185 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+V NL +V ++ LF + G V A VI E +S+GFGFV E+A KAV+
Sbjct: 237 LYVKNLDLEVTQDQFVELFSQFGAVTSA-VIQTDEEGKSKGFGFVNFENHEQAAKAVDTL 295
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARLE 271
H D +G+ L V++A + + E + +E G +Y+ NL +VD+ +L
Sbjct: 296 HDTDFNGKKLFVSRAQKKAEREEELRKSYESAKMEKLSKYQGVNLYIKNLEDDVDDEKLR 355
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
F G + + +V+ D + G S+GFGFV SS E A+A ++ + + + + V++A+
Sbjct: 356 AEFEPFGTITSCKVMRD-DKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQ 414
Query: 332 DRQRR 336
R+ R
Sbjct: 415 RREVR 419
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 19/188 (10%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VG L V L +F G V V + T RS G+ +V V + E+A+E
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNVTDGERALEQL 105
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNA----------RL 270
+ I GR A R +R P + + G I++ NL +DN L
Sbjct: 106 NYSLIKGR-------ACRIMWSQRDPALRKTGQGNIFIKNLDELIDNKVRTAQKTPPHAL 158
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
F+ G V++ +V D E GRSRG+G+V + AI A++G L+ + + V
Sbjct: 159 HDTFAAFGNVLSCKVATD-EQGRSRGYGYVHYETAEAAESAIKAVNGMLLNDKKVYVGYH 217
Query: 331 EDRQRRSS 338
R+ R S
Sbjct: 218 ISRKERQS 225
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ L++ NL DVD EKL FE GT+ +V+ + + S+GFGFV S+ +EA KA
Sbjct: 336 QGVNLYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRD-DKGTSKGFGFVCFSSPDEATKA 394
Query: 218 VEMFHRYDIDGRLLTVNKAAPR 239
V + I + L V+ A R
Sbjct: 395 VAEMNNKMIGSKPLYVSLAQRR 416
>gi|195117176|ref|XP_002003125.1| GI24040 [Drosophila mojavensis]
gi|193913700|gb|EDW12567.1| GI24040 [Drosophila mojavensis]
Length = 423
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 8/177 (4%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L ++ E L+ F + G + V+ N E+ RSRGFGFVT +
Sbjct: 5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPGNVNHV 64
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ-PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
++ + +DGR + PR Q P++ G+++++G LP V L F
Sbjct: 65 LQS-GPHTLDGRTIDPKPCNPRTLQKPKKGG-----GYKVFLGGLPSNVTETDLRTFFGR 118
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+GKV ++YD+E +SRGFGF++ E + + + NL+G+ + + AE R
Sbjct: 119 YGKVTEVVIMYDQEKKKSRGFGFLSFEEEASV-EHVTNERYINLNGKQVEIKKAEPR 174
>gi|449266192|gb|EMC77278.1| ELAV-like protein 2 [Columba livia]
Length = 388
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 63 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAE 122
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 123 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 174
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 175 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 217
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 304 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 363
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 364 ASLNGYRLGDRVLQVSFKTNKTHKA 388
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 307 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 366
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 367 NGYRLGDRVLQV 378
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 69 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTL 128
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 129 NGLRLQTKTIKVSYA 143
>gi|74004700|ref|XP_862045.1| PREDICTED: uncharacterized protein LOC608074 isoform 11 [Canis
lupus familiaris]
gi|410968906|ref|XP_003990940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Felis catus]
Length = 356
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 68 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 123
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 124 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 182
Query: 334 QRRSS 338
Q S
Sbjct: 183 QEMQS 187
>gi|157277969|ref|NP_444493.1| heterogeneous nuclear ribonucleoprotein A3 isoform c [Mus musculus]
gi|162329579|ref|NP_001104765.1| heterogeneous nuclear ribonucleoprotein A3 isoform b [Rattus
norvegicus]
gi|335303045|ref|XP_003359613.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Sus scrofa]
gi|25991929|gb|AAN76992.1|AF463524_1 ribonucleoprotein heterogeneous nuclear ribonucleoprotein A3 [Mus
musculus]
gi|23274114|gb|AAH23828.1| Hnrpa3 protein [Mus musculus]
gi|34327779|gb|AAQ63631.1| heterogeneous nuclear ribonucleoprotein A3 variant b [Rattus
norvegicus]
gi|111599310|gb|AAI16251.1| Hnrpa3 protein [Mus musculus]
gi|111599547|gb|AAI16252.1| Hnrpa3 protein [Mus musculus]
gi|148695243|gb|EDL27190.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148695244|gb|EDL27191.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148703315|gb|EDL35262.1| mCG48756 [Mus musculus]
gi|149022302|gb|EDL79196.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022303|gb|EDL79197.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022304|gb|EDL79198.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022305|gb|EDL79199.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|187957410|gb|AAI58039.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|187957412|gb|AAI57920.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
Length = 357
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 68 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 123
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 124 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 182
Query: 334 QRRSS 338
Q S
Sbjct: 183 QEMQS 187
>gi|406868018|gb|EKD21055.1| RNA binding domain containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 426
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 8/189 (4%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTV 211
E V P ++VGNL +D+ E + FE G ++ + I + S+GFG+V ++
Sbjct: 223 ERVLPAPSNSIYVGNLLFDITQEDIQREFESFGPIK-SVTIASDNRGLSKGFGYVEFESI 281
Query: 212 EEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLE 271
E+A A+E ++ ++GR L VN P A V EP +++GNL +E+ +A L
Sbjct: 282 EQATAAIEGKNQAVLEGRRLVVNYMNKSQRSPAGAEPVNEPSKTLFIGNLAFEMSDADLN 341
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFG---FVTMSSETELNDAIAALDGQNLDGRAIRVN 328
++F + V++ RV DR TG+ RGF FV + S + D AL G+ + GR +R++
Sbjct: 342 KLFRDIRNVIDVRVAIDRRTGQPRGFAHADFVDVESAIKGKD---ALLGKEVYGRTLRID 398
Query: 329 V-AEDRQRR 336
A R RR
Sbjct: 399 FSAGIRDRR 407
>gi|355750652|gb|EHH54979.1| hypothetical protein EGM_04098, partial [Macaca fascicularis]
Length = 326
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 68 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 123
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 124 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 182
Query: 334 QRRSS 338
Q S
Sbjct: 183 QEMQS 187
>gi|148695240|gb|EDL27187.1| mCG1305, isoform CRA_a [Mus musculus]
Length = 351
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 68 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 123
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 124 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 182
Query: 334 QRRSS 338
Q S
Sbjct: 183 QEMQS 187
>gi|397489099|ref|XP_003815574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Pan paniscus]
gi|426337838|ref|XP_004032902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Gorilla gorilla gorilla]
gi|119631468|gb|EAX11063.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|119631470|gb|EAX11065.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|194375464|dbj|BAG56677.1| unnamed protein product [Homo sapiens]
gi|221046256|dbj|BAH14805.1| unnamed protein product [Homo sapiens]
Length = 356
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 68 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 123
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 124 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 182
Query: 334 QRRSS 338
Q S
Sbjct: 183 QEMQS 187
>gi|197098694|ref|NP_001125266.1| heterogeneous nuclear ribonucleoprotein A3 [Pongo abelii]
gi|55727504|emb|CAH90507.1| hypothetical protein [Pongo abelii]
Length = 355
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 68 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 123
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 124 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 182
Query: 334 QRRSS 338
Q S
Sbjct: 183 QEMQS 187
>gi|6754264|ref|NP_034616.1| ELAV-like protein 2 isoform 2 [Mus musculus]
gi|13124206|sp|Q60899.1|ELAV2_MOUSE RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Mel-N1
gi|1144004|gb|AAC52644.1| nervous system-specific RNA binding protein Mel-N1 [Mus musculus]
gi|15020258|gb|AAK74154.1| ELAV-like neuronal protein-1 [Mus musculus]
gi|148699000|gb|EDL30947.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 360
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 276 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 335
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 336 ASLNGYRLGDRVLQVSFKTNKTHKA 360
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 339 NGYRLGDRVLQV 350
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 60/84 (71%)
Query: 251 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 310
E +R +VG L W D+ L+ FS++G++++A+++ DRETGRSRGFGFVT SE +
Sbjct: 3 ETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQ 62
Query: 311 AIAALDGQNLDGRAIRVNVAEDRQ 334
AI ++G+ LDGR+I VN A+ R+
Sbjct: 63 AIEEMNGKELDGRSITVNEAQSRR 86
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + D L F + G + A++I +RET RSRGFGFVT + E +A+E
Sbjct: 7 RCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 221 FHRYDIDGRLLTVNKAAPR 239
+ ++DGR +TVN+A R
Sbjct: 67 MNGKELDGRSITVNEAQSR 85
>gi|312378306|gb|EFR24923.1| hypothetical protein AND_10202 [Anopheles darlingi]
Length = 645
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 19/196 (9%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E AKLF V N D+ E L +FEK G++ V+ + +SRGFGFV +
Sbjct: 186 EKAKLFTNVYVKNFGEDLTEEALHEMFEKYGSITSHRVMM--KDGKSRGFGFVAFENPDA 243
Query: 214 AEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLP 262
AE+AV+ + ++ DG++L V +A + + R FE G +YV NL
Sbjct: 244 AERAVQELNAKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYHGVNLYVKNLD 303
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+D+ RL + F+ +G + +A+V+ D GRS+GFGFV S+ E A+ ++G+ +
Sbjct: 304 DTIDDERLRKEFAPYGTITSAKVMLDE--GRSKGFGFVCFSAPDEATKAVTEMNGRIVGS 361
Query: 323 RAIRVNVAEDRQRRSS 338
+ + V +A+ ++ R S
Sbjct: 362 KPLYVALAQRKEERKS 377
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L D+ L F AG V V + T RS G+ +V +AE+A++
Sbjct: 11 ASLYVGDLHADITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALD 70
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I GR + + +R P + + G +++ NL ++DN + FS G
Sbjct: 71 TMNFDTIKGRPIRI-------MWSQRDPSLRKSGVGNVFIKNLDKKIDNKAMYDTFSAFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +V D E G+S+G+GFV +E N +I ++G L+ + + V R+ R
Sbjct: 124 NILSCKVAQD-EKGQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVFVGRFISRKER 180
>gi|34785465|gb|AAH57655.1| Hnrpa3 protein, partial [Mus musculus]
Length = 303
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 68 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 123
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 124 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 182
Query: 334 QRRSS 338
Q S
Sbjct: 183 QEMQS 187
>gi|395819370|ref|XP_003783066.1| PREDICTED: ELAV-like protein 2 [Otolemur garnettii]
Length = 388
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 64 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 123
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 124 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 175
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G
Sbjct: 176 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPG 222
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 70 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 129
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 130 NGLRLQTKTIKVSYA 144
>gi|170579093|ref|XP_001894673.1| polyadenylate-binding protein 1 [Brugia malayi]
gi|158598601|gb|EDP36463.1| polyadenylate-binding protein 1, putative [Brugia malayi]
Length = 655
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N ++D E L LF K G + A V+ + + +S+GFGFV E+AEKAV
Sbjct: 201 VYIKNFADELDKEALEKLFSKFGKITSAAVMVDAD-GKSKGFGFVAFENPEDAEKAVTEM 259
Query: 222 HRYDIDG--RLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNAR 269
H Y++ G R L V +A + + R +E G +YV NL V++
Sbjct: 260 HEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDDI 319
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L+Q F +GK+ +A+V+ D + GRS+GFGFV E A+ ++G+ + + + V +
Sbjct: 320 LKQNFEAYGKITSAKVMCD-DNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVAL 378
Query: 330 AEDRQRRSS 338
A+ ++ R +
Sbjct: 379 AQRKEDRKA 387
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ + F G + +V N E S+G+GFV T E A+KA+E
Sbjct: 108 IFIKNLDKSIDNKAIYDTFSMFGNILSCKVA-NDEESNSKGYGFVHFETEESAQKAIEKV 166
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ ++G+ + V K PR + +Y+ N E+D LE++FS+ GK+
Sbjct: 167 NGMLLEGKKVYVGKFQPRTARLREMGETARRFTNVYIKNFADELDKEALEKLFSKFGKIT 226
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG--RAIRVNVAEDRQRRSS 338
+A V+ D + G+S+GFGFV + + A+ + L G R + V A+ + RS+
Sbjct: 227 SAAVMVDAD-GKSKGFGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQKKNERSA 284
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AMLFEK AG V V + T RS G+ +V +AE+
Sbjct: 18 ASLYVGDLHPDVTE---AMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAER 74
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + +R P + G I++ NL +DN + FS
Sbjct: 75 ALDTMNFDMMYGKPIRI-------MWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFS 127
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +V D E+ S+G+GFV +E AI ++G L+G+ + V + R
Sbjct: 128 MFGNILSCKVANDEES-NSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRTA 186
Query: 336 R 336
R
Sbjct: 187 R 187
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L +V A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 16 PMASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPA---DA 72
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D G+ IR+
Sbjct: 73 ERALDTMNFDMMYGKPIRI 91
>gi|355557990|gb|EHH14770.1| hypothetical protein EGK_00744 [Macaca mulatta]
Length = 385
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 47 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 106
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 107 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 158
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 159 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 218
Query: 334 QRRSS 338
++SS
Sbjct: 219 SQKSS 223
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 301 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 360
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 361 ASLNGYRLGDRVLQVSFKTNKAHKS 385
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 364 NGYRLGDRVLQV 375
>gi|115511032|ref|NP_004423.2| ELAV-like protein 2 isoform a [Homo sapiens]
gi|197097794|ref|NP_001127414.1| ELAV-like protein 2 [Pongo abelii]
gi|149736900|ref|XP_001498035.1| PREDICTED: ELAV-like protein 2 isoform 1 [Equus caballus]
gi|291383145|ref|XP_002708096.1| PREDICTED: ELAV-like 2-like isoform 1 [Oryctolagus cuniculus]
gi|296190038|ref|XP_002743026.1| PREDICTED: ELAV-like protein 2 isoform 2 [Callithrix jacchus]
gi|311245695|ref|XP_001924617.2| PREDICTED: ELAV-like protein 2 isoform 1 [Sus scrofa]
gi|332229737|ref|XP_003264044.1| PREDICTED: ELAV-like protein 2 isoform 2 [Nomascus leucogenys]
gi|332831660|ref|XP_520515.3| PREDICTED: ELAV-like protein 2 isoform 3 [Pan troglodytes]
gi|345777488|ref|XP_865062.2| PREDICTED: ELAV-like protein 2 isoform 3 [Canis lupus familiaris]
gi|402897261|ref|XP_003911687.1| PREDICTED: ELAV-like protein 2 isoform 1 [Papio anubis]
gi|403272638|ref|XP_003928159.1| PREDICTED: ELAV-like protein 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426220513|ref|XP_004004459.1| PREDICTED: ELAV-like protein 2 isoform 1 [Ovis aries]
gi|426361461|ref|XP_004047929.1| PREDICTED: ELAV-like protein 2 isoform 1 [Gorilla gorilla gorilla]
gi|75070704|sp|Q5R9Z6.1|ELAV2_PONAB RecName: Full=ELAV-like protein 2
gi|93141258|sp|Q12926.2|ELAV2_HUMAN RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Hel-N1
gi|55729364|emb|CAH91414.1| hypothetical protein [Pongo abelii]
gi|119578989|gb|EAW58585.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_d [Homo sapiens]
gi|261860488|dbj|BAI46766.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 2
[synthetic construct]
gi|380784355|gb|AFE64053.1| ELAV-like protein 2 isoform a [Macaca mulatta]
Length = 359
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 275 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 334
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 335 ASLNGYRLGDRVLQVSFKTNKTHKA 359
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 338 NGYRLGDRVLQV 349
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|84662766|ref|NP_034618.2| ELAV-like protein 4 isoform a [Mus musculus]
gi|354468156|ref|XP_003496533.1| PREDICTED: ELAV-like protein 4 isoform 3 [Cricetulus griseus]
gi|2500580|sp|Q61701.1|ELAV4_MOUSE RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|603495|dbj|BAA06723.1| HuD [Mus musculus]
gi|440906869|gb|ELR57085.1| ELAV-like protein 4 [Bos grunniens mutus]
Length = 385
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 47 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 106
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 107 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 158
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 159 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 218
Query: 334 QRRSS 338
++SS
Sbjct: 219 SQKSS 223
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 301 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 360
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 361 ASLNGYRLGDRVLQVSFKTNKAHKS 385
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 364 NGYRLGDRVLQV 375
>gi|119578990|gb|EAW58586.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_e [Homo sapiens]
Length = 374
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 49 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 108
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 109 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 160
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 161 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 203
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 290 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 349
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 350 ASLNGYRLGDRVLQVSFKTNKTHKA 374
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 293 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 352
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 353 NGYRLGDRVLQV 364
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 55 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 114
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 115 NGLRLQTKTIKVSYA 129
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 58/80 (72%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G LPW D+ L+ FS G+V ARV+ DRETGRSRGFGFV S ++A++A
Sbjct: 37 KLFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSA 96
Query: 315 LDGQNLDGRAIRVNVAEDRQ 334
+DGQNL GR +RV+ AE+R+
Sbjct: 97 MDGQNLGGRTVRVSFAEERR 116
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
+ +KLF+G LP+ D + L F G V A VI +RET RSRGFGFV +VE
Sbjct: 30 IRCMSSSKLFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVEN 89
Query: 214 AEKAVEMFHRYDIDGRLLTVNKAAPR 239
A +A+ ++ GR + V+ A R
Sbjct: 90 ASEALSAMDGQNLGGRTVRVSFAEER 115
>gi|195503537|ref|XP_002098694.1| GE23791 [Drosophila yakuba]
gi|194184795|gb|EDW98406.1| GE23791 [Drosophila yakuba]
Length = 356
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 10/189 (5%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
E++ EP KLF+G L Y E L FEK G + V+ + T RSRGFGF+T
Sbjct: 15 EDDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITY 74
Query: 209 ---STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEV 265
S ++EA+K+ + IDGR++ +A PR Q +P +++VG L +
Sbjct: 75 SHSSMIDEAQKS----RPHKIDGRVVEPKRAVPR--QDIDSPNAGATVKKLFVGALKDDH 128
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
D + F G +V+ +V D+ETG+ RGF FV + D + L+G+ +
Sbjct: 129 DEQCIRDYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQLNGKMV 187
Query: 326 RVNVAEDRQ 334
V A +Q
Sbjct: 188 DVKKALPKQ 196
>gi|62088168|dbj|BAD92531.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) variant [Homo sapiens]
Length = 367
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 43 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 102
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 103 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 154
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 155 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 197
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 283 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 342
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 343 ASLNGYRLGDRVLQVSFKTNKTHKA 367
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 286 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 345
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 346 NGYRLGDRVLQV 357
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 49 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 108
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 109 NGLRLQTKTIKVSYA 123
>gi|351713507|gb|EHB16426.1| ELAV-like protein 4 [Heterocephalus glaber]
Length = 385
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 47 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 106
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 107 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 158
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 159 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 218
Query: 334 QRRSS 338
++SS
Sbjct: 219 SQKSS 223
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 301 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 360
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 361 ASLNGYRLGDRVLQVSFKTNKAHKS 385
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 364 NGYRLGDRVLQV 375
>gi|348554579|ref|XP_003463103.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cavia porcellus]
Length = 347
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 147 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 206
Query: 334 QRRSS 338
++SS
Sbjct: 207 SQKSS 211
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 47/225 (20%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 183
Query: 219 EMFHRYDIDGRL--LTVNKA------------------------APRGTQPERAPRVFEP 252
+ + G +TV A P Q +R R F P
Sbjct: 184 KGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFSR-FSP 242
Query: 253 --------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 292
G+ I+V NL + D + L Q+F G V N +V+ D T
Sbjct: 243 ITIDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTN 302
Query: 293 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+ +GFGFVTM++ E AIA+L+G L R ++V+ ++ +S
Sbjct: 303 KCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 347
>gi|117647212|ref|NP_001071119.1| ELAV-like protein 4 [Rattus norvegicus]
gi|2500581|sp|O09032.1|ELAV4_RAT RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|1911579|gb|AAB50733.1| HuD [Rattus sp.]
gi|165970854|gb|AAI58559.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Rattus norvegicus]
Length = 373
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 147 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 206
Query: 334 QRRSS 338
++SS
Sbjct: 207 SQKSS 211
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 289 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 348
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 349 ASLNGYRLGDRVLQVSFKTNKAHKS 373
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 352 NGYRLGDRVLQV 363
>gi|521144|gb|AAA69698.1| ELAV-like neuronal protein 1 [Homo sapiens]
Length = 359
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 147 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 275 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 334
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
+L+G L R ++V+ ++ ++
Sbjct: 335 RSLNGYRLGDRVLQVSFKTNKTHKA 359
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIRSL 337
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 338 NGYRLGDRVLQV 349
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 101 NGLRLQTKTIKVSYA 115
>gi|395514482|ref|XP_003761446.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Sarcophilus
harrisii]
Length = 389
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 64 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 123
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 124 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 175
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 176 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 218
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 305 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 364
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 365 ASLNGYRLGDRVLQVSFKTNKTHKA 389
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 308 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 367
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 368 NGYRLGDRVLQV 379
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 70 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 129
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 130 NGLRLQTKTIKVSYA 144
>gi|355565001|gb|EHH21490.1| hypothetical protein EGK_04572, partial [Macaca mulatta]
Length = 357
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 68 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 123
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 124 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKAISK 182
Query: 334 QRRSS 338
Q S
Sbjct: 183 QEMQS 187
>gi|118487563|gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 58/80 (72%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G LPW D+ L+ FS G+V ARV+ DRETGRSRGFGFV S ++A++A
Sbjct: 37 KLFIGGLPWSTDDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSA 96
Query: 315 LDGQNLDGRAIRVNVAEDRQ 334
+DGQNL GR +RV+ AE+R+
Sbjct: 97 MDGQNLGGRTVRVSFAEERR 116
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
+ +KLF+G LP+ D + L F G V A VI +RET RSRGFGFV +VE
Sbjct: 30 IRCMSSSKLFIGGLPWSTDDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVEN 89
Query: 214 AEKAVEMFHRYDIDGRLLTVNKAAPR 239
A +A+ ++ GR + V+ A R
Sbjct: 90 ASEALSAMDGQNLGGRTVRVSFAEER 115
>gi|297264391|ref|XP_001096533.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
3 [Macaca mulatta]
Length = 336
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|224129106|ref|XP_002320502.1| predicted protein [Populus trichocarpa]
gi|222861275|gb|EEE98817.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 18/185 (9%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+ KLF+G + +D D E+L F G V A ++ +R T R+RGFGFV + AE+
Sbjct: 4 DSGKLFIGGISWDTDEERLKGYFRSFGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERV 63
Query: 218 VEMFHRYDIDGRLLTVNKAAPR----------GTQPERAPRVFEPGF--RIYVGNLPWEV 265
++ ++ IDGR++ KA PR G +P PG +I+VG L V
Sbjct: 64 IK--EKHSIDGRMVEAKKAVPRDDQNILNRNSGGSIHSSP---GPGRTKKIFVGGLASTV 118
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
+ F + G +++ V+YD T R RGFGF+T SE E D + L+G+ +
Sbjct: 119 TENDFKNYFDQFGTIIDVVVMYDHNTQRPRGFGFITFDSE-EAVDKVLMRTFHELNGKMV 177
Query: 326 RVNVA 330
V A
Sbjct: 178 EVKRA 182
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P K+FVG L V F++ GT+ V+Y+ T R RGFGF+T + EEA
Sbjct: 103 PGRTKKIFVGGLASTVTENDFKNYFDQFGTIIDVVVMYDHNTQRPRGFGFITFDS-EEAV 161
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPR--GTQPERAP 247
V M ++++G+++ V +A P+ P R+P
Sbjct: 162 DKVLMRTFHELNGKMVEVKRAVPKELSPGPSRSP 195
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G + W+ D RL+ F G+VV A ++ DR TGR+RGFGFV + I
Sbjct: 7 KLFIGGISWDTDEERLKGYFRSFGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIK- 65
Query: 315 LDGQNLDGRAIRVNVAEDR 333
+ ++DGR + A R
Sbjct: 66 -EKHSIDGRMVEAKKAVPR 83
>gi|2801552|gb|AAC40080.1| RNA binding protein Elavl4 [Mus musculus]
Length = 346
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 35 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 95 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 146
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 147 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 206
Query: 334 QRRSS 338
++SS
Sbjct: 207 SQKSS 211
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 44/223 (19%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 183
Query: 219 EMFHRYDIDGRL--LTV---NKAAPRGTQ---------PER---------APRV-FEP-- 252
+ + G +TV N + + +Q P R A R F P
Sbjct: 184 KGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRFSPIT 243
Query: 253 ------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 294
G+ I+V NL + D + L Q+F G V N +V+ D T +
Sbjct: 244 IDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKC 303
Query: 295 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+GFGFVTM++ E AIA+L+G L R ++V+ ++ +S
Sbjct: 304 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 346
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 14/186 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETD-RSRGFGFVTMSTVEEAEKAVEM 220
++ N+ DV E+ LF K G +I + R+ D +S+GFGFV +EA+ AV+
Sbjct: 228 VYCKNVDADVTDEEFEKLFTKYG--KITSCVLQRDEDGKSKGFGFVNFENHDEAQTAVDE 285
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARL 270
H D G+ L V +A + + E R +E G +Y+ N+P D+ RL
Sbjct: 286 LHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERL 345
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
F+ G + + +++ +G SRGFGFV S+ E N A++ ++G+ LD R + V +A
Sbjct: 346 RDEFAPFGAITSCKIM-RAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALA 404
Query: 331 EDRQRR 336
+ + R
Sbjct: 405 QRKDVR 410
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G + +V + S G+GFV T E A+ A++
Sbjct: 136 IFIKNLDAGIDNKALHDTFAAFGNILSCKVATSESG--SLGYGFVHYETAEAADAAIKHV 193
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---IYVGNLPWEVDNARLEQVFSEHG 278
+ ++ + + V PR ER ++ E R +Y N+ +V + E++F+++G
Sbjct: 194 NGMLLNDKKVYVGHHIPR---KERQAKIEESRARFTNVYCKNVDADVTDEEFEKLFTKYG 250
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
K+ + + D E G+S+GFGFV + E A+ L + G+ + V A+ + R
Sbjct: 251 KITSCVLQRD-EDGKSKGFGFVNFENHDEAQTAVDELHDSDFKGQKLFVARAQKKSER 307
>gi|388510586|gb|AFK43359.1| unknown [Lotus japonicus]
Length = 305
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 103/192 (53%), Gaps = 11/192 (5%)
Query: 139 QEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTV-EIAEVIYNRET 197
Q++ EE EEF +L N+P+ E + LFE+ GTV E+ +YN+
Sbjct: 87 QQQQTEEAT--TEEF----STTRLVAQNVPWTSTPEDVRSLFERYGTVLEVELSMYNK-- 138
Query: 198 DRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP-GFRI 256
RSRG FV MS+ EEA +A+ Y+ +GR+L +N A P+ + +P F +
Sbjct: 139 TRSRGLAFVEMSSPEEALEALNKLESYEFEGRVLKLNYARPKKKKAPPPVVQRKPVTFNL 198
Query: 257 YVGNLPWEVDNARLEQVF-SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+V NL +E + L + F S +VV+A VV+ + +S G+GFV+ S+ E N A++
Sbjct: 199 FVANLSYEATSKDLREFFDSGSSQVVSAEVVFHEDPRKSTGYGFVSFKSKKEANAALSEF 258
Query: 316 DGQNLDGRAIRV 327
+ GR++RV
Sbjct: 259 QEKTFMGRSLRV 270
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
R+ N+PW + +F +G V+ + +T RSRG FV MSS E +A+
Sbjct: 103 RLVAQNVPWTSTPEDVRSLFERYGTVLEVELSMYNKT-RSRGLAFVEMSSPEEALEALNK 161
Query: 315 LDGQNLDGRAIRVNVA 330
L+ +GR +++N A
Sbjct: 162 LESYEFEGRVLKLNYA 177
>gi|91095037|ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
castaneum]
gi|270014772|gb|EFA11220.1| hypothetical protein TcasGA2_TC005185 [Tribolium castaneum]
Length = 607
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 105/196 (53%), Gaps = 18/196 (9%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E AKLF V N D+ E+L +FEK G + +++ +++ +S+GFGFV + E
Sbjct: 186 EKAKLFTNVYVKNFGEDLTEEQLRTMFEKYGKITSYKIM-SKDDGKSKGFGFVAFESPEA 244
Query: 214 AEKAVEMFH-RYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLP 262
AE AVE + + IDG+ L V +A + + + R FE G +YV NL
Sbjct: 245 AETAVEALNGKEIIDGKPLYVGRAQKKAERQQELKRRFEALKMERLNRYQGVNLYVKNLD 304
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+D+ RL + FS G + +A+V+ E RS+GFGFV SS E A+ ++G+ +
Sbjct: 305 DTIDDERLRKEFSPFGTITSAKVMM--EDNRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 362
Query: 323 RAIRVNVAEDRQRRSS 338
+ + V +A+ ++ R +
Sbjct: 363 KPLYVALAQRKEDRKA 378
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L D+ AMLFEK AG V V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHTDITE---AMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I GR + + +R P + + G +++ NL +DN + FS
Sbjct: 68 ALDTMNFDLIKGRPIRI-------MWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +V D E G S+G+GFV +E N +I ++G L+G+ + V R+
Sbjct: 121 AFGNILSCKVAQD-ENGTSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKE 179
Query: 336 R 336
R
Sbjct: 180 R 180
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L ++ A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHTDITEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D GR IR+
Sbjct: 66 ERALDTMNFDLIKGRPIRI 84
>gi|46592818|ref|NP_997568.1| ELAV-like protein 2 isoform 1 [Mus musculus]
gi|29294744|gb|AAH49125.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
gi|34849537|gb|AAH58393.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 373
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 49 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 108
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 109 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 160
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 161 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 203
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 289 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 348
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 349 ASLNGYRLGDRVLQVSFKTNKTHKA 373
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 292 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 352 NGYRLGDRVLQV 363
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 55 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 114
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 115 NGLRLQTKTIKVSYA 129
>gi|119578987|gb|EAW58583.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_b [Homo sapiens]
Length = 373
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 49 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 108
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 109 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 160
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 161 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 203
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 289 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 348
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 349 ASLNGYRLGDRVLQVSFKTNKTHKA 373
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 292 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 352 NGYRLGDRVLQV 363
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 55 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 114
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 115 NGLRLQTKTIKVSYA 129
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 57/80 (71%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W N LE F+ +G++++++V+ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAEDR 333
++G+ LDGR I VN A+ R
Sbjct: 68 NMNGKELDGRNITVNQAQSR 87
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + +E L F G + ++VI +RET RSRGFGFVT S+ A+E
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 221 FHRYDIDGRLLTVNKAAPR 239
+ ++DGR +TVN+A R
Sbjct: 69 MNGKELDGRNITVNQAQSR 87
>gi|390602556|gb|EIN11949.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 161
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 59/79 (74%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGNL W + L FS +G+++++ V+ DR+TGRSRGFGFVT SS E ++AIA+
Sbjct: 4 KVYVGNLSWNTTDESLRAAFSHYGQILDSIVMRDRDTGRSRGFGFVTFSSSAEADNAIAS 63
Query: 315 LDGQNLDGRAIRVNVAEDR 333
L+ Q+LDGR IRVN+A R
Sbjct: 64 LNEQDLDGRRIRVNLANAR 82
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
AK++VGNL ++ E L F G + + V+ +R+T RSRGFGFVT S+ EA+ A+
Sbjct: 3 AKVYVGNLSWNTTDESLRAAFSHYGQILDSIVMRDRDTGRSRGFGFVTFSSSAEADNAIA 62
Query: 220 MFHRYDIDGRLLTVNKAAPR 239
+ D+DGR + VN A R
Sbjct: 63 SLNEQDLDGRRIRVNLANAR 82
>gi|327263683|ref|XP_003216647.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Anolis carolinensis]
Length = 397
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 73 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 132
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 133 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 184
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 185 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 227
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L +N GT G+ I+V NL + D + L Q+F
Sbjct: 286 GVKRFSPMTIDGMTSLAGINIPGHAGT-----------GWCIFVYNLAPDADESILWQMF 334
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 335 GPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKT 394
Query: 335 RRS 337
++
Sbjct: 395 HKA 397
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 316 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 375
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 376 NGYRLGDRVLQV 387
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 79 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 138
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 139 NGLRLQTKTIKVSYA 153
>gi|317036295|ref|XP_001398046.2| C6 transcription factor [Aspergillus niger CBS 513.88]
Length = 1095
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 7/183 (3%)
Query: 155 EPPEDAK-LFVGNLPYDVDSEKLAMLFEKAGTVE-IAEVIYNRETDRSRGFGFVTMSTVE 212
EPP + +F+GN+ YDV E L EK G VE + V+ NR S+G+G+V +++
Sbjct: 904 EPPTPKETVFIGNVFYDVTREDLKKAMEKYGVVEKVVLVLDNRGI--SKGYGYVQFDSID 961
Query: 213 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 272
A++AV+ + +GR +TV + A R ++ P +Y+GNLP+E+ + L +
Sbjct: 962 AAQRAVDALNMRLFEGRRVTV-QFAQNNVYHRR--QLNAPTRTLYIGNLPFEMTDRDLNE 1018
Query: 273 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 332
+F + VV+ RV DR TG++RGF S + A+A L+ + GR +R++ ++
Sbjct: 1019 LFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAMAILENKLPYGRRLRLDYSKA 1078
Query: 333 RQR 335
R
Sbjct: 1079 TSR 1081
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 10/189 (5%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
+++ EP KLF+G L Y + L FEK G + V+ + T RSRGFGF+T
Sbjct: 15 HDDDITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITY 74
Query: 209 S---TVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEV 265
S ++EA+KA + IDGR++ +A PR Q +P +++VG L +
Sbjct: 75 SHSTMIDEAQKARP----HKIDGRVVEPKRAVPR--QDIDSPNAGATVKKLFVGALKDDH 128
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
D L F G +V+ +V D+ETG+ RGF FV + D + L+G+ +
Sbjct: 129 DEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQLNGKMV 187
Query: 326 RVNVAEDRQ 334
V A +Q
Sbjct: 188 DVKKALPKQ 196
>gi|8778468|gb|AAF79476.1|AC022492_20 F1L3.34 [Arabidopsis thaliana]
Length = 392
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 96/181 (53%), Gaps = 5/181 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLFVG + ++ +E A F K G V + ++ +R T RGFGFVT + AEK +E
Sbjct: 90 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 149
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 280
H ID R + + + PRG + V + +I+VG LP ++ L+ F +G +
Sbjct: 150 DHV--IDDRKVDLKRTLPRGDKDTDIKAVSKTR-KIFVGGLPPLLEEDELKNYFCVYGDI 206
Query: 281 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ--RRSS 338
+ +++YD TGRSRGFGFVT +E ++ + L + + + AE ++ R +S
Sbjct: 207 IEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGRDNS 266
Query: 339 F 339
F
Sbjct: 267 F 267
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K+FVG LP ++ ++L F G + +++Y+ T RSRGFGFVT T + ++
Sbjct: 181 KIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSD 240
Query: 221 FHRYDIDGRLLTVNKAAPRGTQPERAPRVF 250
+++ + + + +A P+ T + + R +
Sbjct: 241 GKVHELGDKQVEIKRAEPKRTGRDNSFRSY 270
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 246 APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 303
P VF +++VG + WE F + G+VV++ ++ DR TG RGFGFVT +
Sbjct: 81 VPFVFVYVRKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFA 138
>gi|363744745|ref|XP_003643117.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gallus gallus]
Length = 366
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP + E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 EDSKTNLIVNYLPQSMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 154 QYGRIITSRILVDQVTGMSRGVGFIRFDKRIEAEEAIKGLNGQ 196
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 282 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 341
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 342 ASLNGYRLGDRVLQVSFKTNKTHKA 366
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 285 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 345 NGYRLGDRVLQV 356
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 48 LIVNYLPQSMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTL 107
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 108 NGLRLQTKTIKVSYA 122
>gi|356566592|ref|XP_003551514.1| PREDICTED: uncharacterized protein LOC100794390 [Glycine max]
Length = 479
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLF+G + +D D E+L F K G V A ++ +R T R+RGFGFV + AE+ +
Sbjct: 6 GKLFIGGISWDTDEERLKDYFGKYGEVIEAVIMRDRVTGRARGFGFVVFADPSVAERVI- 64
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQP----ERAPRVFEPG----FRIYVGNLPWEVDNARLE 271
++ IDGR + KA PR Q + PG +I+VG LP + + +
Sbjct: 65 -MDKHIIDGRTVEAKKAVPRDDQQNINRQSGSAHASPGPGRTKKIFVGGLPSTITESDFK 123
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
F + G + + V+YD T R RGFGF+T SE E D + L+G+ + V A
Sbjct: 124 MYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSE-EAVDRVLYKTFHELNGKMVEVKRA 181
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P K+FVG LP + M F++ GT+ V+Y+ T R RGFGF+T + E +
Sbjct: 102 PGRTKKIFVGGLPSTITESDFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVD 161
Query: 216 KAV-EMFHRYDIDGRLLTVNKAAPR--GTQPERAPRV 249
+ + + FH +++G+++ V +A P+ P R+P +
Sbjct: 162 RVLYKTFH--ELNGKMVEVKRAVPKELSPGPSRSPLI 196
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G + W+ D RL+ F ++G+V+ A ++ DR TGR+RGFGFV + + I
Sbjct: 7 KLFIGGISWDTDEERLKDYFGKYGEVIEAVIMRDRVTGRARGFGFVVFADPSVAERVI-- 64
Query: 315 LDGQNLDGRAIRVNVAEDR 333
+D +DGR + A R
Sbjct: 65 MDKHIIDGRTVEAKKAVPR 83
>gi|281347138|gb|EFB22722.1| hypothetical protein PANDA_010481 [Ailuropoda melanoleuca]
Length = 377
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 39 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 98
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 99 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 150
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 151 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 210
Query: 334 QRRSS 338
++SS
Sbjct: 211 SQKSS 215
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 293 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 352
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 353 ASLNGYRLGDRVLQVSFKTNKAHKS 377
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 296 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 355
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 356 NGYRLGDRVLQV 367
>gi|126347016|ref|XP_001368514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like, partial
[Monodelphis domestica]
Length = 356
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 6 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 65
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 66 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 121
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 122 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 180
Query: 334 QRRSS 338
Q S
Sbjct: 181 QEMQS 185
>gi|344241813|gb|EGV97916.1| ELAV-like protein 4 [Cricetulus griseus]
gi|431896875|gb|ELK06139.1| ELAV-like protein 4, partial [Pteropus alecto]
Length = 350
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 39 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 98
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 99 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 150
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 151 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 210
Query: 334 QRRSS 338
++SS
Sbjct: 211 SQKSS 215
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 44/223 (19%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 128 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 187
Query: 219 EMFHRYDIDGRL--LTV---NKAAPRGTQ---------PER---------APRV-FEP-- 252
+ + G +TV N + + +Q P R A R F P
Sbjct: 188 KGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRFSPIT 247
Query: 253 ------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 294
G+ I+V NL + D + L Q+F G V N +V+ D T +
Sbjct: 248 IDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKC 307
Query: 295 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+GFGFVTM++ E AIA+L+G L R ++V+ ++ +S
Sbjct: 308 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 350
>gi|334326768|ref|XP_001373196.2| PREDICTED: DAZ-associated protein 1-like [Monodelphis domestica]
Length = 452
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
PP KLFVG L + E L F + G V ++ ++ T++SRGFGFV
Sbjct: 52 PPGSRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD-PNCV 110
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERA-PR-VFEPGFR--------IYVGNLPWEV 265
V + +DGR + PRG QPER P+ ++ G R I+VG +P
Sbjct: 111 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNC 170
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
L + F + G V ++YD E R RGFGF+T E ++ A+ + ++ G+ +
Sbjct: 171 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKV 229
Query: 326 RVNVAEDRQRRS 337
V AE R +S
Sbjct: 230 EVKRAEPRDSKS 241
>gi|326934489|ref|XP_003213321.1| PREDICTED: DAZ-associated protein 1-like [Meleagris gallopavo]
Length = 397
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E AKLFVG L + E L F + G V ++ ++ T++SRGFGFV
Sbjct: 28 EPAKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD-PNCVGT 86
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERA-PR-VFEPGFR--------IYVGNLPWEVDN 267
V + +DGR + PRG QPER P+ ++ G R I+VG +P
Sbjct: 87 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGE 146
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L + F + G V ++YD E R RGFGF+T E ++ A+ + ++ G+ + V
Sbjct: 147 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVEV 205
Query: 328 NVAEDRQRRS 337
AE R +S
Sbjct: 206 KRAEPRDSKS 215
>gi|297664977|ref|XP_002810889.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pongo abelii]
Length = 380
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 213
Query: 334 QRRSS 338
++SS
Sbjct: 214 SQKSS 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 296 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 355
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 356 ASLNGYRLGDRVLQVSFKTNKAHKS 380
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 359 NGYRLGDRVLQV 370
>gi|195624752|gb|ACG34206.1| RNA-binding protein [Zea mays]
Length = 469
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLFVG + ++ D ++L F + G V A ++ +R T R+RGFGFV + AE+
Sbjct: 8 GKLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVT- 66
Query: 220 MFHRYDIDGRLLTVNKAAPRG----TQPERAPRVFEPG----FRIYVGNLPWEVDNARLE 271
++ IDGR++ KA PR + PG +I+VG LP V A
Sbjct: 67 -IEKHMIDGRMVEAKKAVPRDDHSIVSKSNTSSIGSPGPGRTRKIFVGGLPSNVTEADFR 125
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
F + G + + V+YD T R RGFGF+T SE ++ A+
Sbjct: 126 GYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 166
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P K+FVG LP +V FE+ G + V+Y+ T R RGFGF+T + + +
Sbjct: 104 PGRTRKIFVGGLPSNVTEADFRGYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVD 163
Query: 216 KAV-EMFHRYDIDGRLLTVNKAAPRGTQPERAPR 248
KA+ + FH +++G+++ V KA P+ P R
Sbjct: 164 KALHKSFH--ELNGKMVEVKKAVPKEQSPGPVAR 195
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG + WE D RL + F G+V A ++ DR TGR+RGFGFV + T
Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAER--VT 66
Query: 315 LDGQNLDGRAIRVNVAEDRQRRS 337
++ +DGR + A R S
Sbjct: 67 IEKHMIDGRMVEAKKAVPRDDHS 89
>gi|149693657|ref|XP_001492578.1| PREDICTED: ELAV-like protein 4 isoform 4 [Equus caballus]
Length = 380
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 213
Query: 334 QRRSS 338
++SS
Sbjct: 214 SQKSS 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 296 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 355
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 356 ASLNGYRLGDRVLQVSFKTNKAHKS 380
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 359 NGYRLGDRVLQV 370
>gi|363735855|ref|XP_003641619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Gallus gallus]
Length = 386
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 36 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 95
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
+ A+ + +DGR++ +A R + P +I+VG + + + L + F
Sbjct: 96 DAAMSA-RPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYF 152
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
++GK+ V+ DR++G+ RGF FVT + D I ++G V A +Q
Sbjct: 153 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSKQ 211
>gi|440901911|gb|ELR52772.1| Heterogeneous nuclear ribonucleoprotein A3, partial [Bos grunniens
mutus]
Length = 182
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 1 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 60
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 61 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 116
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 117 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 175
Query: 334 QRRSS 338
Q S
Sbjct: 176 QEMQS 180
>gi|73977005|ref|XP_860272.1| PREDICTED: ELAV-like protein 4 isoform 15 [Canis lupus familiaris]
Length = 380
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 213
Query: 334 QRRSS 338
++SS
Sbjct: 214 SQKSS 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 296 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 355
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 356 ASLNGYRLGDRVLQVSFKTNKAHKS 380
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 359 NGYRLGDRVLQV 370
>gi|410954614|ref|XP_003983958.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Felis catus]
Length = 301
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFV 206
+F+ E EP + KLF+G L ++ +E L FE+ GT+ V+ + T RSRGFGFV
Sbjct: 1 MFKSESPKEPEQLRKLFIGGLSFETTNESLRSHFEQWGTITDCVVMRDPNTKRSRGFGFV 60
Query: 207 TMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVD 266
T +TVEE + A+ + +DGR++ +A R + + P +I+VG + + +
Sbjct: 61 TYATVEEVDAAMNA-RAHKVDGRVVEPKRAVLR--EDSQRPGAHLTVTKIFVGGIKEDTE 117
Query: 267 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 326
L F ++GK+ ++ D+ +G+ RGF FVT + D IA ++G
Sbjct: 118 EHHLRDYFEQYGKIEVIEIMTDQGSGKKRGFPFVTFDDHDSV-DKIAIQKYHTVNGHNCE 176
Query: 327 VNVAEDRQRRSS 338
V A +Q +S
Sbjct: 177 VRKALSKQEMAS 188
>gi|213625406|gb|AAI70539.1| Xel-1 protein [Xenopus laevis]
Length = 388
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 62 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 121
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 122 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 173
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 174 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 216
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 304 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 363
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ + ++
Sbjct: 364 ASLNGYRLGDRVLQVSFKTSKTHKA 388
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 307 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 366
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 367 NGYRLGDRVLQV 378
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 68 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 127
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 128 NGLRLQTKTIKVSYA 142
>gi|179537|gb|AAA58396.1| brain protein [Homo sapiens]
gi|14280329|gb|AAK57541.1| HUDPRO1 [Homo sapiens]
gi|119627247|gb|EAX06842.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_b [Homo sapiens]
Length = 380
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 213
Query: 334 QRRSS 338
++SS
Sbjct: 214 SQKSS 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 296 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 355
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 356 ASLNGYRLGDRVLQVSFKTNKAHKS 380
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 359 NGYRLGDRVLQV 370
>gi|449506755|ref|XP_002199353.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Taeniopygia guttata]
Length = 385
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 35 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 94
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
+ A+ + +DGR++ +A R + P +I+VG + + + L + F
Sbjct: 95 DAAMSA-RPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYF 151
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
++GK+ V+ DR++G+ RGF FVT + D I ++G V A +Q
Sbjct: 152 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSKQ 210
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 58/79 (73%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++YVGNL W + L + FSE+G+VV++ V+ DRETGRSRGFGFVT SSE E AI +
Sbjct: 4 KVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAINS 63
Query: 315 LDGQNLDGRAIRVNVAEDR 333
L Q+LDGR I+VN+A R
Sbjct: 64 LHEQDLDGRRIKVNLANAR 82
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
K++VGNL + + L F + G V + V+ +RET RSRGFGFVT S+ +EAE A+
Sbjct: 4 KVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAINS 63
Query: 221 FHRYDIDGRLLTVNKAAPR 239
H D+DGR + VN A R
Sbjct: 64 LHEQDLDGRRIKVNLANAR 82
>gi|207080284|ref|NP_001128867.1| DKFZP459N111 protein [Pongo abelii]
gi|390458025|ref|XP_003732040.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897269|ref|XP_003911691.1| PREDICTED: ELAV-like protein 2 isoform 5 [Papio anubis]
gi|403272644|ref|XP_003928162.1| PREDICTED: ELAV-like protein 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426361469|ref|XP_004047933.1| PREDICTED: ELAV-like protein 2 isoform 5 [Gorilla gorilla gorilla]
gi|55731642|emb|CAH92527.1| hypothetical protein [Pongo abelii]
Length = 389
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 64 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 123
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 124 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 175
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 176 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 305 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 364
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 365 ASLNGYRLGDRVLQVSFKTNKTHKA 389
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 308 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 367
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 368 NGYRLGDRVLQV 379
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 70 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 129
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 130 NGLRLQTKTIKVSYA 144
>gi|403258685|ref|XP_003921883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|296220327|ref|XP_002756261.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Callithrix jacchus]
Length = 304
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|291401095|ref|XP_002716927.1| PREDICTED: mCG1035404-like isoform 1 [Oryctolagus cuniculus]
Length = 377
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR + +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRAVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G + V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHSCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|148673673|gb|EDL05620.1| mCG50656 [Mus musculus]
Length = 271
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|38328278|gb|AAH62198.1| Hnrpa3 protein [Mus musculus]
Length = 318
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|221316765|ref|NP_068771.2| ELAV-like protein 4 isoform 1 [Homo sapiens]
gi|114556466|ref|XP_001134946.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 2 [Pan troglodytes]
gi|332219811|ref|XP_003259051.1| PREDICTED: ELAV-like protein 4 isoform 6 [Nomascus leucogenys]
gi|395855045|ref|XP_003799982.1| PREDICTED: ELAV-like protein 4 isoform 5 [Otolemur garnettii]
gi|397518912|ref|XP_003829619.1| PREDICTED: ELAV-like protein 4 isoform 6 [Pan paniscus]
gi|402854513|ref|XP_003891912.1| PREDICTED: ELAV-like protein 4 isoform 6 [Papio anubis]
gi|426329583|ref|XP_004025818.1| PREDICTED: ELAV-like protein 4 isoform 6 [Gorilla gorilla gorilla]
gi|223590202|sp|P26378.2|ELAV4_HUMAN RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|380810344|gb|AFE77047.1| ELAV-like protein 4 isoform 1 [Macaca mulatta]
Length = 380
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 213
Query: 334 QRRSS 338
++SS
Sbjct: 214 SQKSS 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 296 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 355
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 356 ASLNGYRLGDRVLQVSFKTNKAHKS 380
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 359 NGYRLGDRVLQV 370
>gi|255945691|ref|XP_002563613.1| Pc20g11240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588348|emb|CAP86453.1| Pc20g11240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 356
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P + L+VGNL +DV +E L FEK G VE A ++++ S+GFG+VT STVEEA
Sbjct: 117 PVPKSTLYVGNLFFDVTAEDLRKHFEKYGAVENALIVHD-ARGLSKGFGYVTFSTVEEAT 175
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
+A+ H ++GR + V + RA +P +Y+GNLP+E+ + L+ + +
Sbjct: 176 QAITQQHGGILEGREVVVQFS----NTTYRAMAENKPSKTLYIGNLPYELTDQDLQDLIA 231
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ V + R+ DR TG RGF + ++ L + GR + VN A
Sbjct: 232 DLHGVTDVRIPVDRRTGLPRGFAHIDFLEQSNATHGKELLSRKEPYGRKLFVNFA 286
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L++GNLPY++ + L L V + +R T RGF + A E+
Sbjct: 212 LYIGNLPYELTDQDLQDLIADLHGVTDVRIPVDRRTGLPRGFAHIDFLEQSNATHGKELL 271
Query: 222 HRYDIDGRLLTVNKAAPRGTQPE 244
R + GR L VN A + PE
Sbjct: 272 SRKEPYGRKLFVNFARRKVLSPE 294
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 100/182 (54%), Gaps = 12/182 (6%)
Query: 154 VEPP-----EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
V PP ++A +++GNL V + + LF + G V + ++ + +G+GFV
Sbjct: 8 VVPPLYERNQEATIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEF 67
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNA 268
+ E+A+ A+++ H + G+ + VNKA+ + R E G +++GNL E+D
Sbjct: 68 KSEEDADYAIKIMHMIKLYGKPIKVNKAS-------QDKRTQEVGANLFIGNLDTEIDEK 120
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
L + FS G +++ +++ + ETG S+G+GFV+ + + A+ A++GQ L + IRV
Sbjct: 121 TLYETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALTAMNGQFLGTKIIRVE 180
Query: 329 VA 330
A
Sbjct: 181 YA 182
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
IY+GNL +V + + ++F + G VVN + D+ +G +G+GFV SE + + AI +
Sbjct: 21 IYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDADYAIKIM 80
Query: 316 DGQNLDGRAIRVNVAEDRQR 335
L G+ I+VN A +R
Sbjct: 81 HMIKLYGKPIKVNKASQDKR 100
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A LF+GNL ++D + L F G + +++ N ET S+G+GFV+ E ++ A+
Sbjct: 106 ANLFIGNLDTEIDEKTLYETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALT 165
Query: 220 MFHRYDIDGRLLTVNKAAPR-------GTQPERAPRVFEP----GFRIYVGNLPWEV 265
+ + +++ V A + G+Q ER P +VG +P E+
Sbjct: 166 AMNGQFLGTKIIRVEYAFKKDAKGERHGSQAERLLAANRPLAQKALLGFVGYMPTEL 222
>gi|84662764|ref|NP_001033787.1| ELAV-like protein 4 isoform b [Mus musculus]
gi|291398924|ref|XP_002715150.1| PREDICTED: ELAV-like 4-like isoform 1 [Oryctolagus cuniculus]
gi|426215488|ref|XP_004002004.1| PREDICTED: ELAV-like protein 4 isoform 4 [Ovis aries]
gi|26347767|dbj|BAC37532.1| unnamed protein product [Mus musculus]
gi|112180554|gb|AAH52451.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Mus musculus]
Length = 380
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 213
Query: 334 QRRSS 338
++SS
Sbjct: 214 SQKSS 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 296 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 355
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 356 ASLNGYRLGDRVLQVSFKTNKAHKS 380
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 359 NGYRLGDRVLQV 370
>gi|395327650|gb|EJF60048.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 333
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 13/178 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+G L +D E L F + G VE ++ + RSR F F+T + A M
Sbjct: 1 MFIGGLNWDTTDEALKKYFSQFGKVEACTIMRD-AAGRSRCFAFLTFE--DPASVNAVMV 57
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ +DG+++ +A PR + +RA ++F +G LP V + + + F++ GKVV
Sbjct: 58 REHFLDGKIIDPKRAIPR-QEHQRATKLF-------IGGLPGSVTSESMREYFTQFGKVV 109
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
+A V+ DRETGRS+GFGFV+ E + + +DG+ I V +A+ R +R ++
Sbjct: 110 DATVMLDRETGRSKGFGFVSF--ENVNVEPMLGFGNLQIDGKLIDVKLAQPRSQREAY 165
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLF+G LP V SE + F + G V A V+ +RET RS+GFGFV+ V + +
Sbjct: 83 KLFIGGLPGSVTSESMREYFTQFGKVVDATVMLDRETGRSKGFGFVSFENVN--VEPMLG 140
Query: 221 FHRYDIDGRLLTVNKAAPR 239
F IDG+L+ V A PR
Sbjct: 141 FGNLQIDGKLIDVKLAQPR 159
>gi|301763026|ref|XP_002916933.1| PREDICTED: ELAV-like protein 2-like [Ailuropoda melanoleuca]
Length = 427
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 103 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 162
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 163 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 214
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 215 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 257
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 343 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 402
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 403 ASLNGYRLGDRVLQVSFKTNKTHKA 427
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
P +FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA
Sbjct: 339 HPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEA 398
Query: 215 EKAVEMFHRYDIDGRLLTV 233
A+ + Y + R+L V
Sbjct: 399 AMAIASLNGYRLGDRVLQV 417
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 109 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 168
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 169 NGLRLQTKTIKVSYA 183
>gi|242053621|ref|XP_002455956.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
gi|241927931|gb|EES01076.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
Length = 349
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
AK+F+G L D F K G + A ++ +R T + RGFGF+T + ++ +E
Sbjct: 14 AKIFIGGLSKDTSMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPAVVDRVIE 73
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H I+G+L+ + + P+G P + + +I+VG LP + ++ FS+ GK
Sbjct: 74 DEHV--INGKLVEIKRTIPKGAAPLKDFKTK----KIFVGGLPSALKEDEFKEFFSKFGK 127
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ-NLDGRAIRVNVAEDRQ 334
VV ++ D T RSRGFGF+ +E ++D +A +L+G + + AE ++
Sbjct: 128 VVEHEIIRDHTTNRSRGFGFIVFDAEKTVDDLLAKKGNMIDLNGSQVEIKKAEPKK 183
>gi|219363315|ref|NP_001136724.1| uncharacterized protein LOC100216861 [Zea mays]
gi|194696774|gb|ACF82471.1| unknown [Zea mays]
gi|414883906|tpg|DAA59920.1| TPA: RNA-binding protein [Zea mays]
Length = 469
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLFVG + ++ D ++L F + G V A ++ +R T R+RGFGFV + AE+
Sbjct: 8 GKLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVT- 66
Query: 220 MFHRYDIDGRLLTVNKAAPRG----TQPERAPRVFEPG----FRIYVGNLPWEVDNARLE 271
++ IDGR++ KA PR + PG +I+VG LP V A
Sbjct: 67 -IEKHMIDGRMVEAKKAVPRDDHSIVSKSNTSSIGSPGPGRTRKIFVGGLPSNVTEADFR 125
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
F + G + + V+YD T R RGFGF+T SE ++ A+
Sbjct: 126 GYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKAL 166
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P K+FVG LP +V FE+ G + V+Y+ T R RGFGF+T + + +
Sbjct: 104 PGRTRKIFVGGLPSNVTEADFRGYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVD 163
Query: 216 KAV-EMFHRYDIDGRLLTVNKAAPRGTQPERAPR 248
KA+ + FH +++G+++ V KA P+ P R
Sbjct: 164 KALHKSFH--ELNGKMVEVKKAVPKEQSPGPVAR 195
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG + WE D RL + F G+V A ++ DR TGR+RGFGFV + T
Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAER--VT 66
Query: 315 LDGQNLDGRAIRVNVAEDRQRRS 337
++ +DGR + A R S
Sbjct: 67 IEKHMIDGRMVEAKKAVPRDDHS 89
>gi|119627248|gb|EAX06843.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_c [Homo sapiens]
Length = 356
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 45 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 104
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 105 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 156
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 157 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 216
Query: 334 QRRSS 338
++SS
Sbjct: 217 SQKSS 221
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 44/223 (19%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 134 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 193
Query: 219 EMFHRYDIDGRL--LTV---NKAAPRGTQ---------PER---------APRV-FEP-- 252
+ + G +TV N + + +Q P R A R F P
Sbjct: 194 KGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRFSPIT 253
Query: 253 ------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 294
G+ I+V NL + D + L Q+F G V N +V+ D T +
Sbjct: 254 IDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKC 313
Query: 295 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+GFGFVTM++ E AIA+L+G L R ++V+ ++ +S
Sbjct: 314 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 356
>gi|440909067|gb|ELR59018.1| ELAV-like protein 2 [Bos grunniens mutus]
Length = 388
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 63 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 122
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 123 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 174
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 175 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 217
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 304 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 363
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 364 ASLNGYRLGDRVLQVSFKTNKTHKA 388
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 307 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 366
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 367 NGYRLGDRVLQV 378
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 69 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 128
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 129 NGLRLQTKTIKVSYA 143
>gi|390465926|ref|XP_003733492.1| PREDICTED: ELAV-like protein 4 isoform 5 [Callithrix jacchus]
gi|403258123|ref|XP_003921628.1| PREDICTED: ELAV-like protein 4 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 213
Query: 334 QRRSS 338
++SS
Sbjct: 214 SQKSS 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 296 GWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 355
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ +S
Sbjct: 356 ASLNGYRLGDRVLQVSFKTNKAHKS 380
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 359 NGYRLGDRVLQV 370
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W + LE+ FS +G+V+ ++++ DRETGRSRGFGFVT ++E + DAI
Sbjct: 8 YRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + + L F G V +++I +RET RSRGFGFVT + + A+E
Sbjct: 9 RCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQNLDGRNITVNEA 84
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W + LE+ FS +G+V+ ++++ DRETGRSRGFGFVT ++E + DAI
Sbjct: 8 YRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + + L F G V +++I +RET RSRGFGFVT + + A+E
Sbjct: 9 RCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEG 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ ++DGR +TVN+A
Sbjct: 69 MNGQNLDGRNITVNEA 84
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 169
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D LE FS+ G++V+++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P + + FVG L + D L F + G + +++I +RET RSRGFGFVT + +
Sbjct: 4 PDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMK 63
Query: 216 KAVEMFHRYDIDGRLLTVNKA 236
A+E + D+DGR +TVN+A
Sbjct: 64 DAIEGMNGQDLDGRSITVNEA 84
>gi|387539574|gb|AFJ70414.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 378
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|254281259|ref|NP_001156869.1| ELAV-like protein 4 isoform c [Mus musculus]
Length = 356
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 45 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 104
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 105 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 156
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 157 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 216
Query: 334 QRRSS 338
++SS
Sbjct: 217 SQKSS 221
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 44/223 (19%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 218
DA L+V LP + ++L LF + G + + ++ ++ T SRG GF+ EAE+A+
Sbjct: 134 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 193
Query: 219 EMFHRYDIDGRL--LTV---NKAAPRGTQ---------PER---------APRV-FEP-- 252
+ + G +TV N + + +Q P R A R F P
Sbjct: 194 KGLNGQKPSGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRFSPIT 253
Query: 253 ------------------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 294
G+ I+V NL + D + L Q+F G V N +V+ D T +
Sbjct: 254 IDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKC 313
Query: 295 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
+GFGFVTM++ E AIA+L+G L R ++V+ ++ +S
Sbjct: 314 KGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 356
>gi|118100597|ref|XP_417367.2| PREDICTED: embryonic polyadenylate-binding protein-like [Gallus
gallus]
Length = 632
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 13/192 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E +++ N D+D +L +F + G +V+ + T RS+GFGFV EEA+KA
Sbjct: 189 EFTNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMD-HTGRSKGFGFVNFEKHEEAQKA 247
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDN 267
V + +I+GR++ V +A R + R FE G +YV NL +D+
Sbjct: 248 VADMNGKEINGRMVYVGRAQKRLERQSELKRKFEQMKQERVSRYQGVNLYVKNLDDGIDD 307
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
RL + FS +G + +A+V+ E G S+GFGFV SS E A+ ++G+ + + + V
Sbjct: 308 ERLRKEFSPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
Query: 328 NVAEDRQRRSSF 339
+A+ ++ R +
Sbjct: 366 ALAQRKEERKAI 377
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 15/183 (8%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ L F G + +V+ + + SRG GFV T E A +A++
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDE--NGSRGHGFVHFETQEAATRAIQTM 158
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR------IYVGNLPWEVDNARLEQVFS 275
+ ++ R + V G R R E G R +Y+ N ++D+ RL ++FS
Sbjct: 159 NGMLLNDRKVFV------GHFKSRKEREAEFGARAMEFTNVYIKNFGDDMDDNRLREIFS 212
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
GK ++ +V+ D TGRS+GFGFV E A+A ++G+ ++GR + V A+ R
Sbjct: 213 RFGKTLSVKVMMD-HTGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQKRLE 271
Query: 336 RSS 338
R S
Sbjct: 272 RQS 274
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L DV L F AG + V + + RS G+ ++ +AE+A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALD 70
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ I GR + + + +R P + + G +++ NL +DN L FS G
Sbjct: 71 TMNFEVIKGRPVRIMWS-------QRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFG 123
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
+++ +VV D E G SRG GFV ++ AI ++G L+ R + V + R+ R
Sbjct: 124 NILSCKVVCD-ENG-SRGHGFVHFETQEAATRAIQTMNGMLLNDRKVFVGHFKSRKER 179
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
ERQ E + ++E V + L+V NL +D E+L F GT+ A+V+ E
Sbjct: 271 ERQSELKRKFEQMKQERVSRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVM--TE 328
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 232
S+GFGFV S+ EEA KAV +++GR+++
Sbjct: 329 GGHSKGFGFVCFSSPEEATKAVT-----EMNGRIVS 359
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 252 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
PG+ +YVG+L +V A L + FS G +++ RV D + RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADA 65
Query: 309 NDAIAALDGQNLDGRAIRV 327
A+ ++ + + GR +R+
Sbjct: 66 ERALDTMNFEVIKGRPVRI 84
>gi|348580545|ref|XP_003476039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 355
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 68 DAA--MCARPHKVDGRVVEPKRAISR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 123
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 124 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 182
Query: 334 QRRSS 338
Q S
Sbjct: 183 QEMQS 187
>gi|296416057|ref|XP_002837697.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633580|emb|CAZ81888.1| unnamed protein product [Tuber melanosporum]
Length = 691
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 11/176 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
ED K+F+G L ++ E L F + G V V+ + T RSRGFGF+T +
Sbjct: 166 EDGKMFIGGLNWETTDESLKEYFSQYGEVVECTVMRDGPTGRSRGFGFLTFKDPKTVN-- 223
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+ M + +DG+++ +A PR Q + + +I+VG + E + F++
Sbjct: 224 IVMVKEHYLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQEATETDFREYFTQF 275
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G+V++A ++ D++TGR RGFGFVT SE + +A+ LD + I V A+ R
Sbjct: 276 GRVLDATLMMDKDTGRPRGFGFVTFDSEGAVENALNCPTLAILD-KPIEVKKAQPR 330
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 246 APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 305
+P + E G ++++G L WE + L++ FS++G+VV V+ D TGRSRGFGF+T
Sbjct: 161 SPAIKEDG-KMFIGGLNWETTDESLKEYFSQYGEVVECTVMRDGPTGRSRGFGFLTFKDP 219
Query: 306 TELNDAIAALDGQNLDGRAI--RVNVAEDRQRRSS 338
+N I + LDG+ I + + D Q ++S
Sbjct: 220 KTVN--IVMVKEHYLDGKIIDPKRAIPRDEQEKTS 252
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+K+FVG + + F + G V A ++ +++T R RGFGFVT + E A+
Sbjct: 252 SKIFVGGVSQEATETDFREYFTQFGRVLDATLMMDKDTGRPRGFGFVTFDSEGAVENALN 311
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER 245
+D + + V KA PRG ER
Sbjct: 312 CPTLAILD-KPIEVKKAQPRGNIRER 336
>gi|296805985|ref|XP_002843812.1| nucleic acid-binding protein [Arthroderma otae CBS 113480]
gi|238845114|gb|EEQ34776.1| nucleic acid-binding protein [Arthroderma otae CBS 113480]
Length = 318
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 8/183 (4%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P + ++VGN+ +D+ + L K G V + +IY+ SRGFG+V +EEA+
Sbjct: 86 PEPKSTVYVGNILFDITAADLKEYASKYGKVVGSRIIYDSR-GLSRGFGYVKFENIEEAK 144
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KAV H + +GR L+VN A + E R EP ++VGN+ ++ + L ++F
Sbjct: 145 KAVNDMHLSEFEGRKLSVNYAQ-MDLKEETPQRTIEPTRTVFVGNIAHQITDRDLHELFD 203
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA---ALDGQNLDGRAIRVNVAED 332
V + RV DR TG RGF T++ AIA AL G+ GR +R++ +
Sbjct: 204 SIPNVFDVRVAVDRRTGMPRGFAHAEF---TDVESAIAGFEALKGKAPYGRPLRLDYSHS 260
Query: 333 RQR 335
+R
Sbjct: 261 TRR 263
>gi|356520229|ref|XP_003528766.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 277
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 139 QEESGEEGVFEEEEFVEPPED----------------AKLFVGNLPYDVDSEKLAMLFEK 182
+EE EE ++ EE +V P D +++V NLP D+ L +F
Sbjct: 57 KEEVVEERLYREE-YVHPRNDDVLEDEEERDKRLGKACEVYVCNLPRRCDATYLLDMFRP 115
Query: 183 AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-------- 234
GT+ EV + ET+ S+G G+VT+ ++ A AV D+ GR L V
Sbjct: 116 YGTILSVEVCRDAETNESKGCGYVTLGSIYSARNAVAALDGSDVGGRELRVRFSIEMNSK 175
Query: 235 -KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 293
++ + + +E ++YVGNL V +L +FS G VV+ARV++D + G
Sbjct: 176 RRSFNKMNSSTKRISYYESPHKLYVGNLAKTVRPEQLRDLFSRFGNVVSARVLHDFKQGN 235
Query: 294 SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
SR + F++ SE E DA +L+G GR + V
Sbjct: 236 SRVYAFLSFQSEAE-RDAAMSLNGTEYYGRTLIV 268
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+YV NLP D L +F +G +++ V D ET S+G G+VT+ S +A+AAL
Sbjct: 95 VYVCNLPRRCDATYLLDMFRPYGTILSVEVCRDAETNESKGCGYVTLGSIYSARNAVAAL 154
Query: 316 DGQNLDGRAIRVNVA-EDRQRRSSF 339
DG ++ GR +RV + E +R SF
Sbjct: 155 DGSDVGGRELRVRFSIEMNSKRRSF 179
>gi|310790913|gb|EFQ26446.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 474
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 16/191 (8%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
LFVG+L + VD L F++ + A V+ ++ T RSRGFG+V +T E A A+E
Sbjct: 229 LFVGSLAWAVDDNSLYEAFQEFADLTGARVVTDKATGRSRGFGYVDFATPEAAAAALEGS 288
Query: 222 HRYDIDGRLLTVN----KAAPRGTQPERAP-RVFEPGFRI-------YVGNLPWEVDNAR 269
++ GR + ++ K A G RA R G + +VGNLP++VD
Sbjct: 289 QGRELAGRAMNIDFSGQKPAGDGNHQARASDRAQRHGDTVSPESDTLFVGNLPFDVDQDT 348
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL----DGRAI 325
+ FS +V + R+ D ETG +GFG+V+ +S + A A L+GQ + GRA+
Sbjct: 349 VNAFFSTAAEVTSVRLPTDPETGNLKGFGYVSFNSIDDAKTAFAQLNGQYVGEGRSGRAV 408
Query: 326 RVNVAEDRQRR 336
R++ A + +R
Sbjct: 409 RLDFAGQKPQR 419
>gi|148697232|gb|EDL29179.1| mCG1035404 [Mus musculus]
Length = 239
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 68 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 123
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 124 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 182
Query: 334 QRRSS 338
Q S
Sbjct: 183 QEMQS 187
>gi|338722679|ref|XP_001915947.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 4-like [Equus caballus]
Length = 397
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 101/184 (54%), Gaps = 13/184 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N D+D ++L +F K G +V+ + T +S+GFGFV+ + E A+KAVE
Sbjct: 192 IYIKNFGDDMDDKRLEEVFSKYGKTVSVKVMTD-STGKSKGFGFVSFYSHEAAQKAVEEM 250
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ DI+G+LL V +A + + ++FE G ++Y+ NL +D+ +L
Sbjct: 251 NGKDINGQLLFVGRAQKKAERQAELKQMFEQQKQERFRRCQGVKLYIKNLDDTIDDEKLR 310
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS G + +V+ +E GRS+GFG + SS E A+ ++G+ L + + + +A+
Sbjct: 311 REFSSFGSISRVKVM--KEEGRSKGFGLICFSSPEEATRAMTEMNGRILGSKPLNIALAQ 368
Query: 332 DRQR 335
Q+
Sbjct: 369 SLQQ 372
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 97/190 (51%), Gaps = 3/190 (1%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTM 208
+ + ++ +F+ NL +D++ L F G + ++V+ + + SRG+ FV
Sbjct: 87 QRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SRGYAFVHF 144
Query: 209 STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNA 268
A++A+E + + L V + R + IY+ N ++D+
Sbjct: 145 QNQMAADRAIEEMNGALLKDCRLFVGRFKNRQDREAELQNKANEFTNIYIKNFGDDMDDK 204
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
RLE+VFS++GK V+ +V+ D TG+S+GFGFV+ S A+ ++G++++G+ + V
Sbjct: 205 RLEEVFSKYGKTVSVKVMTD-STGKSKGFGFVSFYSHEAAQKAVEEMNGKDINGQLLFVG 263
Query: 329 VAEDRQRRSS 338
A+ + R +
Sbjct: 264 RAQKKAERQA 273
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 10/178 (5%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
A L+VG+L DV + L F G V + + T RS G+ +V + +A+KA++
Sbjct: 10 ASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALD 69
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHG 278
+ +D T+ + R +R + + G +++ NL +DN L + FS G
Sbjct: 70 TMN-FD------TIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFG 122
Query: 279 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
K+++++V+ D + SRG+ FV ++ + AI ++G L + V ++RQ R
Sbjct: 123 KILSSKVMSDDQG--SRGYAFVHFQNQMAADRAIEEMNGALLKDCRLFVGRFKNRQDR 178
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 134 EAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIY 193
+ ERQ E + +++E + KL++ NL +D EKL F G++ +V+
Sbjct: 267 KKAERQAELKQMFEQQKQERFRRCQGVKLYIKNLDDTIDDEKLRREFSSFGSISRVKVM- 325
Query: 194 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 231
+E RS+GFG + S+ EEA +A+ +++GR+L
Sbjct: 326 -KEEGRSKGFGLICFSSPEEATRAMT-----EMNGRIL 357
>gi|348041233|ref|NP_775431.2| ELAV-like protein 2 [Rattus norvegicus]
gi|149044491|gb|EDL97750.1| rCG53485, isoform CRA_b [Rattus norvegicus]
Length = 388
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 64 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 123
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 124 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 175
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 176 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 304 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 363
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 364 ASLNGYRLGDRVLQVSFKTNKTHKA 388
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 307 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 366
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 367 NGYRLGDRVLQV 378
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 70 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 129
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 130 NGLRLQTKTIKVSYA 144
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 7/184 (3%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGF--GFVTMSTVEEA 214
P L+VG L V + L +FE G V ++I ++ S+G+ GFV A
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAA 147
Query: 215 EKAVEMFHRYDIDGRLLTVNKA-APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
E+A++ + I + VN A T E F I+VG+L EV++ L Q
Sbjct: 148 ERAMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFH----IFVGDLSNEVNDEVLLQA 203
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FS G V ARV++D +TGRSRG+GFV ++ + A++++DG+ L RAIR N A +
Sbjct: 204 FSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQK 263
Query: 334 QRRS 337
+ S
Sbjct: 264 GQPS 267
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 38/210 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +V+ E L F G+V A V+++ +T RSRG+GFV +A+KA+
Sbjct: 186 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSM 245
Query: 222 HRYDIDGRLLTVNKAAPRGT-----QPERAPRVFEP------------GFR--------- 255
+ R + N A +G Q A P G +
Sbjct: 246 DGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQT 305
Query: 256 ------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
YVGNL L +F G V+ R+ DR GF F+ M +
Sbjct: 306 PQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADR------GFAFIKMDTHENAA 359
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
AI L+G N++GR ++ + +DR F
Sbjct: 360 MAICQLNGYNVNGRPLKCSWGKDRPPTGQF 389
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 62/83 (74%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+I++G + ++ D+ L++ F ++G VV AR++ DR+TGRSRGFGFVT +S E + AI A
Sbjct: 41 KIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQA 100
Query: 315 LDGQNLDGRAIRVNVAEDRQRRS 337
+DGQ+L GR +RVN A +R +R+
Sbjct: 101 MDGQDLHGRRVRVNYATERPQRT 123
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
+K+F+G + + D L F+K G V A +I +R+T RSRGFGFVT ++ EEA A++
Sbjct: 40 SKIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQ 99
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPER 245
D+ GR + VN A R P+R
Sbjct: 100 AMDGQDLHGRRVRVNYATER---PQR 122
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 4/181 (2%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
P L++G L V E L +FE G V+ ++I ++ R +GFV AE+
Sbjct: 79 PNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNA-RGYNYGFVEYDDPGAAER 137
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
A++ + + + VN A T + F I+VG+L EV++ L Q FS
Sbjct: 138 AMQTLNGRRVHQSEIRVNWAYQSNTTNKEDTSNH---FHIFVGDLSNEVNDEVLTQAFSA 194
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 336
G V ARV++D +TGRSRG+GFV E A++++DG+ L RAIR N A + +
Sbjct: 195 FGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQP 254
Query: 337 S 337
S
Sbjct: 255 S 255
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 40/205 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +V+ E L F G+V A V+++ +T RSRG+GFV EAEKA+
Sbjct: 174 IFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSM 233
Query: 222 HRYDIDGRLLTVNKAAPRGTQ------------------------PERAPRVFE------ 251
+ R + N A +G P +E
Sbjct: 234 DGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASYEVILTQT 293
Query: 252 PGFR--IYVGNL-PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
P ++ +YVGNL P+ N + +F G VV +R DR GF F+ M S
Sbjct: 294 PSWQTTVYVGNLTPYTTPN-DVVPLFQNFGFVVESRFQADR------GFAFIKMDSHENA 346
Query: 309 NDAIAALDGQNLDGRAIRVNVAEDR 333
AI ++G N++GR ++ + +D+
Sbjct: 347 AMAICQMNGYNVNGRPLKCSWGKDK 371
>gi|296490667|tpg|DAA32780.1| TPA: mCG1035404-like [Bos taurus]
Length = 380
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|281349018|gb|EFB24602.1| hypothetical protein PANDA_005072 [Ailuropoda melanoleuca]
gi|351703220|gb|EHB06139.1| ELAV-like protein 2 [Heterocephalus glaber]
gi|355567720|gb|EHH24061.1| Hu-antigen B [Macaca mulatta]
gi|355753294|gb|EHH57340.1| Hu-antigen B [Macaca fascicularis]
gi|431914785|gb|ELK15810.1| ELAV-like protein 2 [Pteropus alecto]
Length = 387
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
ED+K L V LP ++ E+L LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 63 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 122
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 123 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 174
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 318
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ
Sbjct: 175 QYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 217
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 253 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
G+ I+V NL + D + L Q+F G V N +V+ D T + +GFGFVTM++ E AI
Sbjct: 303 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 362
Query: 313 AALDGQNLDGRAIRVNVAEDRQRRS 337
A+L+G L R ++V+ ++ ++
Sbjct: 363 ASLNGYRLGDRVLQVSFKTNKTHKA 387
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L +F G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 306 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 365
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 366 NGYRLGDRVLQV 377
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 256 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 315
+ V LP + L+ +F G++ + ++V D+ TG+S G+GFV + AI L
Sbjct: 69 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 128
Query: 316 DGQNLDGRAIRVNVA 330
+G L + I+V+ A
Sbjct: 129 NGLRLQTKTIKVSYA 143
>gi|410967448|ref|XP_003990231.1| PREDICTED: ELAV-like protein 4 [Felis catus]
Length = 494
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 59 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 118
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 119 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 170
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 171 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 230
Query: 334 QRRSS 338
++SS
Sbjct: 231 SQKSS 235
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L+ +N GT G+ I+V NL + D + L Q+F
Sbjct: 272 GVKRFSPITIDGMTSLVGMNIPGHTGT-----------GWCIFVYNLSPDSDESVLWQLF 320
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 321 GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 379
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
Query: 222 HRYDIDGRLLTVN 234
+ Y + R+L V+
Sbjct: 362 NGYRLGDRVLQVS 374
>gi|312067233|ref|XP_003136646.1| hypothetical protein LOAG_01058 [Loa loa]
gi|307768188|gb|EFO27422.1| hypothetical protein LOAG_01058 [Loa loa]
Length = 655
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N ++D E L LF K G + A V+ + + +S+GFGFV E+AEKAV
Sbjct: 201 VYIKNFADELDKEALEKLFSKFGKITSAAVMVDAD-GKSKGFGFVAFENPEDAEKAVTEM 259
Query: 222 HRYDIDG--RLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNAR 269
H Y++ G R L V +A + + R +E G +YV NL V++
Sbjct: 260 HEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDDI 319
Query: 270 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 329
L+Q F +GK+ +A+V+ D + GRS+GFGFV E A+ ++G+ + + + V +
Sbjct: 320 LKQNFEAYGKITSAKVMCD-DNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVAL 378
Query: 330 AEDRQRRSS 338
A+ ++ R +
Sbjct: 379 AQRKEDRKA 387
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ + F G + +V N E S+G+GFV T E A+KA+E
Sbjct: 108 IFIKNLDKSIDNKAIYDTFSMFGNILSCKVA-NDEESNSKGYGFVHFETEESAQKAIEKV 166
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ ++G+ + V K PR + +Y+ N E+D LE++FS+ GK+
Sbjct: 167 NGMLLEGKKVYVGKFQPRTARLREMGETARRFTNVYIKNFADELDKEALEKLFSKFGKIT 226
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG--RAIRVNVAEDRQRRSS 338
+A V+ D + G+S+GFGFV + + A+ + L G R + V A+ + RS+
Sbjct: 227 SAAVMVDAD-GKSKGFGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQKKNERSA 284
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AMLFEK AG V V + T RS G+ +V +AE+
Sbjct: 18 ASLYVGDLHPDVTE---AMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAER 74
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + + G+ + + +R P + G I++ NL +DN + FS
Sbjct: 75 ALDTMNFDMMYGKPIRI-------MWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFS 127
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +V D E+ S+G+GFV +E AI ++G L+G+ + V + R
Sbjct: 128 MFGNILSCKVANDEES-NSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRTA 186
Query: 336 R 336
R
Sbjct: 187 R 187
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L +V A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 16 PMASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPA---DA 72
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D G+ IR+
Sbjct: 73 ERALDTMNFDMMYGKPIRI 91
>gi|307165845|gb|EFN60208.1| Polyadenylate-binding protein 1 [Camponotus floridanus]
Length = 635
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 105/196 (53%), Gaps = 18/196 (9%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEE 213
E AKLF V N D+ +KL +FEK GT+ +V+ +++ +SRGFGFV +
Sbjct: 186 EKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVM-SKDDGKSRGFGFVAFEDPDA 244
Query: 214 AEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLP 262
AE+AV + DI +G+ + V +A + + + R FE G +YV NL
Sbjct: 245 AEQAVLELNGKDISEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLD 304
Query: 263 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 322
+D+ RL + F+ G + +A+V+ E GRS+GFGFV S E A+ ++G+ +
Sbjct: 305 DTIDDERLRKEFTPFGTITSAKVMM--EEGRSKGFGFVCFSQPEEATKAVTEMNGRIVGS 362
Query: 323 RAIRVNVAEDRQRRSS 338
+ + V +A+ ++ R +
Sbjct: 363 KPLYVALAQRKEDRKA 378
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L D+ AMLFEK AG V V + T RS G+ +V +AE+
Sbjct: 11 ASLYVGDLHTDITE---AMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAER 67
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I GR + + +R P + + G +++ NL +DN + FS
Sbjct: 68 ALDTMNFDMIKGRPIRI-------MWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFS 120
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ +V D E+G S+G+GFV +E N +I ++G L+G+ + V R+
Sbjct: 121 AFGNILSCKVAQD-ESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKE 179
Query: 336 R 336
R
Sbjct: 180 R 180
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L ++ A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D GR IR+
Sbjct: 66 ERALDTMNFDMIKGRPIRI 84
>gi|74004684|ref|XP_543761.2| PREDICTED: uncharacterized protein LOC608074 isoform 2 [Canis lupus
familiaris]
gi|410968904|ref|XP_003990939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Felis catus]
Length = 378
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|74228812|dbj|BAE21894.1| unnamed protein product [Mus musculus]
Length = 379
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|34740329|ref|NP_919223.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|397489097|ref|XP_003815573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Pan paniscus]
gi|426337836|ref|XP_004032901.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Gorilla gorilla gorilla]
gi|51338779|sp|P51991.2|ROA3_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|34327775|gb|AAQ63629.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|62822160|gb|AAY14709.1| unknown [Homo sapiens]
gi|85567495|gb|AAI12028.1| Heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|109730489|gb|AAI13471.1| HNRPA3 protein [Homo sapiens]
gi|119631469|gb|EAX11064.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|119631471|gb|EAX11066.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|410261478|gb|JAA18705.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261480|gb|JAA18706.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261482|gb|JAA18707.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261484|gb|JAA18708.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261486|gb|JAA18709.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261488|gb|JAA18710.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261490|gb|JAA18711.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261492|gb|JAA18712.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261494|gb|JAA18713.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351651|gb|JAA42429.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351653|gb|JAA42430.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
Length = 378
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|402888739|ref|XP_003907708.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Papio
anubis]
Length = 378
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|332209432|ref|XP_003253815.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 378
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|329664164|ref|NP_001192358.1| heterogeneous nuclear ribonucleoprotein A3 [Bos taurus]
gi|426220819|ref|XP_004004609.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Ovis aries]
Length = 380
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 7/184 (3%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGF--GFVTMSTVEEA 214
P L+VG L V + L +FE G V ++I ++ S+G+ GFV A
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAA 147
Query: 215 EKAVEMFHRYDIDGRLLTVNKA-APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
E+A++ + I + VN A T E F I+VG+L EV++ L Q
Sbjct: 148 ERAMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFH----IFVGDLSNEVNDEVLLQA 203
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FS G V ARV++D +TGRSRG+GFV ++ + A++++DG+ L RAIR N A +
Sbjct: 204 FSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQK 263
Query: 334 QRRS 337
+ S
Sbjct: 264 GQPS 267
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 38/210 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +V+ E L F G+V A V+++ +T RSRG+GFV +A+KA+
Sbjct: 186 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSM 245
Query: 222 HRYDIDGRLLTVNKAAPRGT-----QPERAPRVFEP------------GFR--------- 255
+ R + N A +G Q A P G +
Sbjct: 246 DGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQT 305
Query: 256 ------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
YVGNL L +F G V+ R+ DR GF F+ M +
Sbjct: 306 PQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADR------GFAFIKMDTHENAA 359
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
AI L+G N++GR ++ + +DR F
Sbjct: 360 MAICQLNGYNVNGRPLKCSWGKDRPPTGQF 389
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
Length = 117
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE FS G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAEDRQ 334
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P + + FVG L + D L F G + +++I +RET RSRGFGFVT S+ +
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMR 63
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPR 239
A+E + ++DGR +TVN+A R
Sbjct: 64 DAIEGMNGKELDGRNITVNEAQSR 87
>gi|31559916|ref|NP_666242.2| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37674277|ref|NP_932758.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37693507|ref|NP_937765.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|162329577|ref|NP_001104764.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|311272700|ref|XP_003133549.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Sus scrofa]
gi|30316201|sp|Q8BG05.1|ROA3_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|51316556|sp|Q6URK4.1|ROA3_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|23274033|gb|AAH23908.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|23468331|gb|AAH38364.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|34327777|gb|AAQ63630.1| heterogeneous nuclear ribonucleoprotein A3 variant a [Rattus
norvegicus]
gi|40787633|gb|AAH64824.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|51980308|gb|AAH81878.1| Heterogeneous nuclear ribonucleoprotein A3 [Rattus norvegicus]
gi|58801248|dbj|BAD89508.1| heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|74143970|dbj|BAE41285.1| unnamed protein product [Mus musculus]
gi|148695241|gb|EDL27188.1| mCG1305, isoform CRA_b [Mus musculus]
gi|149022310|gb|EDL79204.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022311|gb|EDL79205.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022312|gb|EDL79206.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022313|gb|EDL79207.1| rCG27231, isoform CRA_c [Rattus norvegicus]
Length = 379
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|395730528|ref|XP_003775743.1| PREDICTED: ELAV-like protein 4 [Pongo abelii]
Length = 366
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 213
Query: 334 QRRSS 338
++SS
Sbjct: 214 SQKSS 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L+ +N GT G+ I+V NL + D + L Q+F
Sbjct: 255 GVKRFSPITIDGMTSLVGMNIPGHTGT-----------GWCIFVYNLSPDSDESVLWQLF 303
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 304 GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKA 363
Query: 335 RRS 337
+S
Sbjct: 364 HKS 366
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 345 NGYRLGDRVLQV 356
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 148 FEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVT 207
F ++ EP KLF+G L Y E L FEK G + V+ + T RSRGFGF+T
Sbjct: 2605 FAQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 2664
Query: 208 M---STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWE 264
S ++EA+K+ + IDGR++ +A PR Q +P +++VG L +
Sbjct: 2665 YSHSSMIDEAQKS----RPHKIDGRVVEPKRAVPR--QDIDSPNAGATVKKLFVGALKDD 2718
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA 324
D + F G +V+ +V D+ETG+ RGF FV + D + L+G+
Sbjct: 2719 HDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQLNGKM 2777
Query: 325 IRVNVAEDRQ 334
+ V A +Q
Sbjct: 2778 VDVKKALPKQ 2787
>gi|322694374|gb|EFY86205.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium acridum
CQMa 102]
Length = 516
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 12/176 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
+D K+F+G L ++ + L FE+ G V V+ + T RSRGFGF+T +
Sbjct: 106 DDGKMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVN-- 163
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
+ M + +DG+++ +A PR Q + + +I+VG + E + F++
Sbjct: 164 IVMVKEHFLDGKIIDPKRAIPRDEQEKTS--------KIFVGGVSQETTDQEFRDYFAQF 215
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
G+VV+A ++ D++TGR RGFGFVT SE + I + G+ + V A+ R
Sbjct: 216 GRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACINVP--LEIHGKPVEVKRAQPR 269
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G L WE + L + F + G+VV V+ D TGRSRGFGF+T +N I
Sbjct: 109 KMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVN--IVM 166
Query: 315 LDGQNLDGRAI--RVNVAEDRQRRSS 338
+ LDG+ I + + D Q ++S
Sbjct: 167 VKEHFLDGKIIDPKRAIPRDEQEKTS 192
>gi|302121706|gb|ADK92872.1| hnRNP [Hypericum perforatum]
Length = 477
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 97/182 (53%), Gaps = 12/182 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
++ KLFVG + +D + E+L F G V A ++ +R T R+RGFGF+ + A++
Sbjct: 4 DNGKLFVGGISWDTNEERLKEYFGSFGDVVEAVIMKDRTTGRARGFGFIVFADPSVADRV 63
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQ--PER---APRVFEPG----FRIYVGNLPWEVDNA 268
++ +++IDGR++ +A PR Q P R + PG +I+VG L V +
Sbjct: 64 IK--EKHNIDGRMVEAKRAIPRDDQNIPSRNSVSSMHGSPGPDHTRKIFVGGLASTVTES 121
Query: 269 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 328
+ F + G +++A V+YD T R RGFGF+T S+ E D + L+G+ + V
Sbjct: 122 DFKNYFDQFGIIIDAVVMYDHNTQRPRGFGFITYDSD-EAVDKVLTKTFHELNGKMVEVK 180
Query: 329 VA 330
A
Sbjct: 181 RA 182
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
+++VG + W+ + RL++ F G VV A ++ DR TGR+RGFGF+ + + + I
Sbjct: 7 KLFVGGISWDTNEERLKEYFGSFGDVVEAVIMKDRTTGRARGFGFIVFADPSVADRVIK- 65
Query: 315 LDGQNLDGRAIRVNVAEDR 333
+ N+DGR + A R
Sbjct: 66 -EKHNIDGRMVEAKRAIPR 83
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P K+FVG L V F++ G + A V+Y+ T R RGFGF+T + E +
Sbjct: 103 PDHTRKIFVGGLASTVTESDFKNYFDQFGIIIDAVVMYDHNTQRPRGFGFITYDSDEAVD 162
Query: 216 KAV-EMFHRYDIDGRLLTVNKAAPR--GTQPERAP 247
K + + FH +++G+++ V +A P+ P R+P
Sbjct: 163 KVLTKTFH--ELNGKMVEVKRAVPKELSPGPTRSP 195
>gi|221316771|ref|NP_001138248.1| ELAV-like protein 4 isoform 4 [Homo sapiens]
gi|114556460|ref|XP_001135439.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 8 [Pan troglodytes]
gi|332219809|ref|XP_003259050.1| PREDICTED: ELAV-like protein 4 isoform 5 [Nomascus leucogenys]
gi|395855043|ref|XP_003799981.1| PREDICTED: ELAV-like protein 4 isoform 4 [Otolemur garnettii]
gi|397518910|ref|XP_003829618.1| PREDICTED: ELAV-like protein 4 isoform 5 [Pan paniscus]
gi|402854511|ref|XP_003891911.1| PREDICTED: ELAV-like protein 4 isoform 5 [Papio anubis]
gi|426329581|ref|XP_004025817.1| PREDICTED: ELAV-like protein 4 isoform 5 [Gorilla gorilla gorilla]
gi|14280323|gb|AAK57538.1| HUD3 [Homo sapiens]
Length = 366
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 213
Query: 334 QRRSS 338
++SS
Sbjct: 214 SQKSS 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L+ +N GT G+ I+V NL + D + L Q+F
Sbjct: 255 GVKRFSPITIDGMTSLVGMNIPGHTGT-----------GWCIFVYNLSPDSDESVLWQLF 303
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 304 GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKA 363
Query: 335 RRS 337
+S
Sbjct: 364 HKS 366
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 345 NGYRLGDRVLQV 356
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 60/83 (72%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LE F G++++A+V+ DRETGRSRGFGFVT ++E + +AI
Sbjct: 4 YRCFVGGLAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQNAIN 63
Query: 314 ALDGQNLDGRAIRVNVAEDRQRR 336
A++G+++DGR I VN+A+ R R
Sbjct: 64 AMNGKDIDGRTISVNMAQARNNR 86
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E+ + FVG L + D + L F G + A+VI +RET RSRGFGFVT +T + + A
Sbjct: 2 EEYRCFVGGLAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQNA 61
Query: 218 VEMFHRYDIDGRLLTVNKAAPR 239
+ + DIDGR ++VN A R
Sbjct: 62 INAMNGKDIDGRTISVNMAQAR 83
>gi|392332853|ref|XP_003752716.1| PREDICTED: regulator of G-protein signaling protein-like [Rattus
norvegicus]
Length = 1173
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 143 GEEGV-FEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSR 201
GE G+ E + EP + KLF+G L ++ + L FEK GT+ V+ + +T RSR
Sbjct: 711 GESGLKMEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSR 770
Query: 202 GFGFVTMSTVEEAEKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGN 260
GFGFVT S VEE + A M R + +DGR++ +A R + P +I+VG
Sbjct: 771 GFGFVTYSCVEEVDAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGG 826
Query: 261 LPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL 320
+ + + L F ++GK+ V+ DR++G+ RGF FVT + D I +
Sbjct: 827 IKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTI 885
Query: 321 DGRAIRVNVAEDRQRRSS 338
+G V A +Q S
Sbjct: 886 NGHNCEVKKALSKQEMQS 903
>gi|357156001|ref|XP_003577309.1| PREDICTED: uncharacterized protein LOC100846541 [Brachypodium
distachyon]
Length = 463
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 24/168 (14%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLF+G + +D + ++L FEK G V A ++ +R T R+RGFGF+ + AE+ +
Sbjct: 6 GKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI- 64
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQ---------------PERAPRVFEPGFRIYVGNLPWE 264
++ IDGR++ KA PR Q P R ++F VG L
Sbjct: 65 -MEKHMIDGRMVEAKKAVPRDDQQALSKSGGSTHGSPGPSRTKKIF-------VGGLAST 116
Query: 265 VDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 312
V+ A F + G + + V+YD T R RGFGF+T SE ++ A+
Sbjct: 117 VNEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKAL 164
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
P K+FVG L V+ FE+ GT+ V+Y+ T R RGFGF+T + E +
Sbjct: 102 PSRTKKIFVGGLASTVNEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVD 161
Query: 216 KAV-EMFHRYDIDGRLLTVNKAAPRGTQPERAPR 248
KA+ + FH +++G+++ V +A P+ P + R
Sbjct: 162 KALFKTFH--ELNGKMVEVKRAVPKELSPGPSMR 193
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 255 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 314
++++G + W+ + RL + F ++G+VV A ++ DR TGR+RGFGF+ + I
Sbjct: 7 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVI-- 64
Query: 315 LDGQNLDGRAIRVNVAEDR 333
++ +DGR + A R
Sbjct: 65 MEKHMIDGRMVEAKKAVPR 83
>gi|355745275|gb|EHH49900.1| hypothetical protein EGM_00635 [Macaca fascicularis]
Length = 289
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 59 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 118
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 119 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 170
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 171 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 230
Query: 334 QRRSS 338
++SS
Sbjct: 231 SQKSS 235
>gi|149693653|ref|XP_001492549.1| PREDICTED: ELAV-like protein 4 isoform 3 [Equus caballus]
Length = 366
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 213
Query: 334 QRRSS 338
++SS
Sbjct: 214 SQKSS 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L+ +N GT G+ I+V NL + D + L Q+F
Sbjct: 255 GVKRFSPITIDGMTSLVGMNIPGHTGT-----------GWCIFVYNLSPDSDESVLWQLF 303
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 304 GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKA 363
Query: 335 RRS 337
+S
Sbjct: 364 HKS 366
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 345 NGYRLGDRVLQV 356
>gi|338721769|ref|XP_003364429.1| PREDICTED: ELAV-like protein 4 [Equus caballus]
Length = 371
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 47 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 106
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 107 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 158
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 159 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 218
Query: 334 QRRSS 338
++SS
Sbjct: 219 SQKSS 223
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L+ +N GT G+ I+V NL + D + L Q+F
Sbjct: 260 GVKRFSPITIDGMTSLVGMNIPGHTGT-----------GWCIFVYNLSPDSDESVLWQLF 308
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 309 GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKA 368
Query: 335 RRS 337
+S
Sbjct: 369 HKS 371
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 350 NGYRLGDRVLQV 361
>gi|443722844|gb|ELU11546.1| hypothetical protein CAPTEDRAFT_164502 [Capitella teleta]
Length = 629
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 13/187 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL +D +KL +FE G + I+ + N E + RGFGFV+ E A KAVE
Sbjct: 194 VYVKNLNETMDDKKLREMFEVFGKI-ISAKMMNTEEGQKRGFGFVSFDDHEAAAKAVEEL 252
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ +++G+ + V +A + + FE G +YV NL ++D+ RL
Sbjct: 253 NNKEVEGKEIYVGRAQKKAERQAELKEKFERMKMERINRYQGVNLYVKNLDEQIDDERLR 312
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ FS+ G + +ARV+ E GR++GFGFV SS E A+ ++G+ + + + V +A+
Sbjct: 313 KEFSQFGTITSARVMT--EGGRTKGFGFVCFSSPEEATKAVTEMNGRIVVAKPLYVALAQ 370
Query: 332 DRQRRSS 338
++ R +
Sbjct: 371 RKEDRKA 377
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 16/181 (8%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AMLFEK AG V V + T RS G+ +V +AE+
Sbjct: 12 ASLYVGDLHPDVTE---AMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAER 68
Query: 217 AVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFS 275
A++ + I GR + + +R P + + G I++ NL +DN L FS
Sbjct: 69 ALDTMNFDAIKGRPIRI-------MWSQRDPSLRKSGVGNIFIKNLDKNIDNKALYDTFS 121
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G +++ ++ D+ S G+GFV +E ++I ++G L+G+ + V R+
Sbjct: 122 AFGNILSCKIAMDQNG--SLGYGFVHFETEEAARNSIEKVNGMLLNGKKVFVGRFMSRKE 179
Query: 336 R 336
R
Sbjct: 180 R 180
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 92/177 (51%), Gaps = 3/177 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL ++D++ L F G + ++ ++ + S G+GFV T E A ++E
Sbjct: 102 IFIKNLDKNIDNKALYDTFSAFGNILSCKIAMDQ--NGSLGYGFVHFETEEAARNSIEKV 159
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ ++G+ + V + R + E + +YV NL +D+ +L ++F GK++
Sbjct: 160 NGMLLNGKKVFVGRFMSRKERLEMLGDKAKKFTNVYVKNLNETMDDKKLREMFEVFGKII 219
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 338
+A+++ + E G+ RGFGFV+ A+ L+ + ++G+ I V A+ + R +
Sbjct: 220 SAKMM-NTEEGQKRGFGFVSFDDHEAAAKAVEELNNKEVEGKEIYVGRAQKKAERQA 275
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Query: 125 EPEGEDTVV----EAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLF 180
E EG++ V + ERQ E E+ + E + + L+V NL +D E+L F
Sbjct: 256 EVEGKEIYVGRAQKKAERQAELKEKFERMKMERINRYQGVNLYVKNLDEQIDDERLRKEF 315
Query: 181 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 232
+ GT+ A V+ E R++GFGFV S+ EEA KAV +++GR++
Sbjct: 316 SQFGTITSARVMT--EGGRTKGFGFVCFSSPEEATKAVT-----EMNGRIVV 360
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 252 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 311
P +YVG+L +V A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 10 PMASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPA---DA 66
Query: 312 IAALDGQNLD---GRAIRV 327
ALD N D GR IR+
Sbjct: 67 ERALDTMNFDAIKGRPIRI 85
>gi|432101161|gb|ELK29445.1| DAZ-associated protein 1 [Myotis davidii]
Length = 435
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 151 EEFVEPPEDA---KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVT 207
E F PP A KLFVG L + E L F + G V ++ ++ T++SRGFGFV
Sbjct: 27 EGFAAPPVRAQTWKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVK 86
Query: 208 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA-PR-VFEPGFR--------IY 257
V + +DGR + PRG QPER P+ ++ G R I+
Sbjct: 87 FKD-PNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRNDNSKSNKIF 145
Query: 258 VGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDG 317
VG +P L + F + G V ++YD E R RGFGF+T E ++ A+ +
Sbjct: 146 VGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHF 204
Query: 318 QNLDGRAIRVNVAEDRQRRS 337
++ G+ + V AE R +S
Sbjct: 205 HDIMGKKVEVKRAEPRDSKS 224
>gi|73977009|ref|XP_532585.2| PREDICTED: ELAV-like protein 4 isoform 1 [Canis lupus familiaris]
gi|291398932|ref|XP_002715154.1| PREDICTED: ELAV-like 4-like isoform 5 [Oryctolagus cuniculus]
gi|426215486|ref|XP_004002003.1| PREDICTED: ELAV-like protein 4 isoform 3 [Ovis aries]
Length = 366
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 213
Query: 334 QRRSS 338
++SS
Sbjct: 214 SQKSS 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L+ +N GT G+ I+V NL + D + L Q+F
Sbjct: 255 GVKRFSPITIDGMTSLVGMNIPGHTGT-----------GWCIFVYNLSPDSDESVLWQLF 303
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 304 GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKA 363
Query: 335 RRS 337
+S
Sbjct: 364 HKS 366
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 345 NGYRLGDRVLQV 356
>gi|405973173|gb|EKC37903.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 465
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 12/188 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
++V NL + D EKL +FE G + A+V+ + + +S+ FGFV+ E A+KAVE
Sbjct: 192 VYVKNLSEETDDEKLREIFELYGKIISAKVMIDDSSRKSKQFGFVSFENPEAAKKAVEAL 251
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLE 271
+ D G++L V +A + + FE G ++V NL +D+ RL
Sbjct: 252 NGNDNAGKILYVGRAQTKIERQAELKEKFERIRKERINRYQGVNLFVKNLDDNIDDKRLR 311
Query: 272 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 331
+ F++ G + +A+V+ E GRS+GFGFV SS E AI ++ + ++ R + V +A+
Sbjct: 312 KEFAQFGTITSAKVM--TENGRSKGFGFVYFSSPEEATKAIVEMNEKIIEARPLYVALAQ 369
Query: 332 DRQRRSSF 339
++ R ++
Sbjct: 370 RKEDRKAY 377
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ L +D++ L F G + +++ + SRG+GFV T E A A+E
Sbjct: 100 VFIKKLDKSIDNKALYDTFSAFGNISSCKIVCDEHG--SRGYGFVHFETDEAARIAIEKV 157
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR----IYVGNLPWEVDNARLEQVFSEH 277
+ ++G+ + V + R + E V + G R +YV NL E D+ +L ++F +
Sbjct: 158 NGMLLNGKKVFVGRFMSRRERLE----VLDLGMRKFNNVYVKNLSEETDDEKLREIFELY 213
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 337
GK+++A+V+ D + +S+ FGFV+ + A+ AL+G + G+ + V A+ + R
Sbjct: 214 GKIISAKVMIDDSSRKSKQFGFVSFENPEAAKKAVEALNGNDNAGKILYVGRAQTKIERQ 273
Query: 338 S 338
+
Sbjct: 274 A 274
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE 196
ERQ E E+ +E + + LFV NL ++D ++L F + GT+ A+V+ E
Sbjct: 271 ERQAELKEKFERIRKERINRYQGVNLFVKNLDDNIDDKRLRKEFAQFGTITSAKVM--TE 328
Query: 197 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 236
RS+GFGFV S+ EEA KA+ + I+ R L V A
Sbjct: 329 NGRSKGFGFVYFSSPEEATKAIVEMNEKIIEARPLYVALA 368
>gi|298707500|emb|CBJ30102.1| Uncharacterized protein [Ectocarpus siliculosus]
Length = 470
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 150/351 (42%), Gaps = 50/351 (14%)
Query: 11 PLSSMADSTSLLSPPSIFARNPYFSIHPRPRPIKLHLSD--SSLSSK-GFSFKLKKTTHF 67
PL +S L RNP S R HLSD L+++ SF L
Sbjct: 25 PLCHPRQRSSKLVSLLYIQRNPQLSTTSR------HLSDLPCCLTARVPVSFCL--IPFL 76
Query: 68 SSFTTFVAQT-SDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEP 126
S V T S A+Q DK ++ +E+G EN E L W +P
Sbjct: 77 KSPVLLVQHTPSHMAEQTFDK-------KRRLDEDGNASAFAENTAESRKE-KLETWLKP 128
Query: 127 EGEDTVVEAGERQEESGEEGVFEE--EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAG 184
+ +V+ S G F+E + P + K+FV LP++ + + L +FE+ G
Sbjct: 129 LDNEQLVKL-LLDIGSVNPGAFDEIHRACDDIPVNKKIFVRGLPWETNDQSLRAVFEQYG 187
Query: 185 TVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 244
+ A V+ ++ T +S+G+GFVT +++ A A+E + IDGR+ N AA R +QP
Sbjct: 188 EIAEATVVMDKMTQKSKGYGFVTFKSMDGAHAALENPEKM-IDGRVSLCNLAALRSSQPL 246
Query: 245 RAPRVFE-------------------------PGFRIYVGNLPWEVDNARLEQVFSEHGK 279
A +I+V L W+ L +FS+ G+
Sbjct: 247 PARAGGGMQGGAMQGGAGGMMGGAVGGSGEDVSARKIFVRGLSWDTTTESLRTMFSQFGE 306
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ + V DR +G+S+G+GFVT A+A + Q LDGR N+A
Sbjct: 307 LEDCVVTTDRASGKSKGYGFVTFRFAANAAAAVAEPEKQ-LDGRLTHCNIA 356
>gi|114556468|ref|XP_001135779.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 12 [Pan troglodytes]
gi|332219801|ref|XP_003259046.1| PREDICTED: ELAV-like protein 4 isoform 1 [Nomascus leucogenys]
gi|395855041|ref|XP_003799980.1| PREDICTED: ELAV-like protein 4 isoform 3 [Otolemur garnettii]
gi|397518902|ref|XP_003829614.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pan paniscus]
gi|402854503|ref|XP_003891907.1| PREDICTED: ELAV-like protein 4 isoform 1 [Papio anubis]
gi|426329573|ref|XP_004025813.1| PREDICTED: ELAV-like protein 4 isoform 1 [Gorilla gorilla gorilla]
gi|221042444|dbj|BAH12899.1| unnamed protein product [Homo sapiens]
gi|261860582|dbj|BAI46813.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 4
[synthetic construct]
Length = 371
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 47 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 106
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 107 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 158
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 159 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 218
Query: 334 QRRSS 338
++SS
Sbjct: 219 SQKSS 223
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L+ +N GT G+ I+V NL + D + L Q+F
Sbjct: 260 GVKRFSPITIDGMTSLVGMNIPGHTGT-----------GWCIFVYNLSPDSDESVLWQLF 308
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 309 GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKA 368
Query: 335 RRS 337
+S
Sbjct: 369 HKS 371
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 350 NGYRLGDRVLQV 361
>gi|383416553|gb|AFH31490.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 272
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEA 214
EP + KLF+G L ++ + L FEK GT+ V+ + +T RSRGFGFVT S VEE
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 215 EKAVEMFHR-YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
+ A M R + +DGR++ +A R + P +I+VG + + + L
Sbjct: 90 DAA--MCARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDY 145
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
F ++GK+ V+ DR++G+ RGF FVT + D I ++G V A +
Sbjct: 146 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV-DKIVVQKYHTINGHNCEVKKALSK 204
Query: 334 QRRSS 338
Q S
Sbjct: 205 QEMQS 209
>gi|325185730|emb|CCA20211.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 465
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
KLF+G + ++ E L F K G + A ++ ++ + + RGFGFVT + V ++ +E
Sbjct: 102 GKLFIGGVSWETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADVAVLDRVLE 161
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF--------------RIYVGNLPWEV 265
H IDGR + V +A PR V G +++VG LP V
Sbjct: 162 ESH--TIDGRTVEVKRAIPRDKTASGPSDVRSSGAHGRGNSGGVITESKKVFVGGLPPSV 219
Query: 266 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 325
+ F E G++ +A V++DRET RSRGFGFVT E + + I+ L G+ +
Sbjct: 220 TEQDFRRYFEEFGRITDAVVMFDRETQRSRGFGFVTFEEEGAVAEVISKT--HELHGKVV 277
Query: 326 RVNVAEDRQRR 336
+ AE ++ R
Sbjct: 278 EIKRAEPKEAR 288
>gi|345780791|ref|XP_859879.2| PREDICTED: ELAV-like protein 4 isoform 4 [Canis lupus familiaris]
Length = 364
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 40 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 99
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 100 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 151
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 152 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 211
Query: 334 QRRSS 338
++SS
Sbjct: 212 SQKSS 216
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L+ +N GT G+ I+V NL + D + L Q+F
Sbjct: 253 GVKRFSPITIDGMTSLVGMNIPGHTGT-----------GWCIFVYNLSPDSDESVLWQLF 301
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 302 GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKA 361
Query: 335 RRS 337
+S
Sbjct: 362 HKS 364
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 283 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 342
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 343 NGYRLGDRVLQV 354
>gi|344278909|ref|XP_003411234.1| PREDICTED: ELAV-like protein 4-like [Loxodonta africana]
Length = 419
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 95 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 154
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 155 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 206
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 207 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 266
Query: 334 QRRSS 338
++SS
Sbjct: 267 SQKSS 271
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L+ +N GT G+ I+V NL + D + L Q+F
Sbjct: 308 GVKRFSPITIDGMTSLVGMNIPGHTGT-----------GWCIFVYNLSPDSDESVLWQLF 356
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 357 GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKA 416
Query: 335 RRS 337
+S
Sbjct: 417 HKS 419
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 338 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 397
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 398 NGYRLGDRVLQV 409
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 7/184 (3%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGF--GFVTMSTVEEA 214
P L+VG L V + L +FE G V ++I ++ S+G+ GFV A
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAA 147
Query: 215 EKAVEMFHRYDIDGRLLTVNKA-APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 273
E+A++ + I + VN A T E F I+VG+L EV++ L Q
Sbjct: 148 ERAMQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFH----IFVGDLSNEVNDEVLLQA 203
Query: 274 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
FS G V ARV++D +TGRSRG+GFV ++ + A++++DG+ L RAIR N A +
Sbjct: 204 FSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQK 263
Query: 334 QRRS 337
+ S
Sbjct: 264 GQPS 267
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 38/210 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +V+ E L F G+V A V+++ +T RSRG+GFV +A+KA+
Sbjct: 186 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSM 245
Query: 222 HRYDIDGRLLTVNKAAPRGT-----QPERAPRVFEP------------GFR--------- 255
+ R + N A +G Q A P G +
Sbjct: 246 DGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMVVQQT 305
Query: 256 ------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 309
YVGNL L +F G V+ R+ DR GF F+ M +
Sbjct: 306 PQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADR------GFAFIKMDTHENAA 359
Query: 310 DAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
AI L+G N++GR ++ + +DR F
Sbjct: 360 MAICQLNGYNVNGRPLKCSWGKDRPPTGQF 389
>gi|297664979|ref|XP_002810890.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pongo abelii]
Length = 371
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 47 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 106
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 107 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 158
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 159 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 218
Query: 334 QRRSS 338
++SS
Sbjct: 219 SQKSS 223
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L+ +N GT G+ I+V NL + D + L Q+F
Sbjct: 260 GVKRFSPITIDGMTSLVGMNIPGHTGT-----------GWCIFVYNLSPDSDESVLWQLF 308
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 309 GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKA 368
Query: 335 RRS 337
+S
Sbjct: 369 HKS 371
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 350 NGYRLGDRVLQV 361
>gi|390465924|ref|XP_002750851.2| PREDICTED: ELAV-like protein 4 isoform 1 [Callithrix jacchus]
Length = 366
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 158 EDAK--LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAE 215
+D+K L V LP ++ E+ LF G +E +++ ++ T +S G+GFV ++AE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 101
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
KA+ + + + + V+ A P A +YV LP + LEQ+FS
Sbjct: 102 KAINTLNGLRLQTKTIKVSYARPSSASIRDA--------NLYVSGLPKTMTQKELEQLFS 153
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRA--IRVNVAEDR 333
++G+++ +R++ D+ TG SRG GF+ E +AI L+GQ G I V A +
Sbjct: 154 QYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNP 213
Query: 334 QRRSS 338
++SS
Sbjct: 214 SQKSS 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 217 AVEMFHRYDIDGR--LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
V+ F IDG L+ +N GT G+ I+V NL + D + L Q+F
Sbjct: 255 GVKRFSPITIDGMTSLVGMNIPGHTGT-----------GWCIFVYNLSPDSDESVLWQLF 303
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G V N +V+ D T + +GFGFVTM++ E AIA+L+G L R ++V+ ++
Sbjct: 304 GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKA 363
Query: 335 RRS 337
+S
Sbjct: 364 HKS 366
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FV NL D D L LF G V +VI + T++ +GFGFVTM+ +EA A+
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 222 HRYDIDGRLLTV 233
+ Y + R+L V
Sbjct: 345 NGYRLGDRVLQV 356
>gi|344301362|gb|EGW31674.1| hypothetical protein SPAPADRAFT_62285 [Spathaspora passalidarum
NRRL Y-27907]
Length = 478
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
L+VGNL + E L F AG ++ +++ N + + F+ + A+ A+
Sbjct: 73 LYVGNLSKSISEEFLKDTFASAGAIQSVKIL-NDKNKPGFNYAFIEYENNQAADMALNTM 131
Query: 222 HRYDIDGRLLTVNKAAPRGT-----QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSE 276
+ + + +N A T PE +P F I+VG+L E+++ +L+Q FS+
Sbjct: 132 NGKILQNFEIKINWAFQSATITTANTPE------DPSFNIFVGDLSPEINDEKLKQAFSK 185
Query: 277 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
+ A V++D +T RSRG+GFVT S++++ A+ ++G+ L+GRAIR N A +Q
Sbjct: 186 FKSLKQAHVMWDMQTSRSRGYGFVTFSNQSDAELALQTMNGEWLNGRAIRCNWASHKQ 243
>gi|193650237|ref|XP_001943392.1| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 650
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 104/188 (55%), Gaps = 14/188 (7%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+++ N+ +V+ ++L +F+K GT+ +V++ ++ SRGFGFV +EAEKAV
Sbjct: 185 VYIKNIDENVNEKELFEMFKKYGTITSCKVMF-KDDGSSRGFGFVAFEDPKEAEKAVTEL 243
Query: 222 H-RYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARL 270
H + +G+ VN+A + + + R FE G +YV NL +D+ RL
Sbjct: 244 HGKKSPEGKTYYVNRAQKKTERQQELKRKFEQYKIERINRYQGVNLYVKNLDDTIDDERL 303
Query: 271 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 330
+ FS G + +A+V+ D GRS+GFGFV SS E A+ ++G+ + + + V +A
Sbjct: 304 RREFSAFGTIKSAKVMMD--DGRSKGFGFVYFSSPEEATKAVTDMNGRIVGTKPLYVTLA 361
Query: 331 EDRQRRSS 338
+ ++ R +
Sbjct: 362 QRKKDRKA 369
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 216
A L+VG+L DV AMLFEK G + V + T S G+ +V + +AE+
Sbjct: 2 ASLYVGDLHSDVTE---AMLFEKFSTVGAILSIRVCRHVITRSSLGYAYVNFQNIADAER 58
Query: 217 AVEMFHRYDIDGRLLTVNKAAP-RGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVF 274
A++ + +DI K P R +R P + + G +++ NL +DN + F
Sbjct: 59 ALDTMN-FDIL-------KGHPMRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTF 110
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
S G +++ +V D ETG S+G+GFV ++ +I ++G L+G+ + V
Sbjct: 111 SAFGNILSCKVAQD-ETGNSKGYGFVHFETKQSATQSIEKVNGMLLNGKKVFV 162
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+F+ NL +D++ + F G + +V + ET S+G+GFV T + A +++E
Sbjct: 92 VFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQD-ETGNSKGYGFVHFETKQSATQSIEKV 150
Query: 222 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 281
+ ++G+ + V + R + + + + +Y+ N+ V+ L ++F ++G +
Sbjct: 151 NGMLLNGKKVFVGRFVGRNDREKELGQRAKLYTNVYIKNIDENVNEKELFEMFKKYGTIT 210
Query: 282 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL-DGRAIRVNVAEDRQRR 336
+ +V++ ++ G SRGFGFV E A+ L G+ +G+ VN A+ + R
Sbjct: 211 SCKVMF-KDDGSSRGFGFVAFEDPKEAEKAVTELHGKKSPEGKTYYVNRAQKKTER 265
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 23/144 (15%)
Query: 104 EEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEF----VEPPED 159
E+P + E G S PEG+ V +++ E +E + E++ + +
Sbjct: 231 EDPKEAEKAVTELHGKKS----PEGKTYYVNRAQKKTERQQELKRKFEQYKIERINRYQG 286
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
L+V NL +D E+L F GT++ A+V+ + RS+GFGFV S+ EEA KAV
Sbjct: 287 VNLYVKNLDDTIDDERLRREFSAFGTIKSAKVMM--DDGRSKGFGFVYFSSPEEATKAVT 344
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQP 243
D++GR++ GT+P
Sbjct: 345 -----DMNGRIV--------GTKP 355
>gi|357473263|ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 190
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 254 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 313
+R +VG L W D+ LEQ FS+ G++ +++V+ DRETGRSRGFGFVT + E + DAI
Sbjct: 8 YRCFVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAIE 67
Query: 314 ALDGQNLDGRAIRVNVAE 331
++GQ++DGR I VN A+
Sbjct: 68 EMNGQDIDGRNITVNEAQ 85
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
+ FVG L + DS+ L F K G + ++VI +RET RSRGFGFVT + + A+E
Sbjct: 9 RCFVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAIEE 68
Query: 221 FHRYDIDGRLLTVNKA 236
+ DIDGR +TVN+A
Sbjct: 69 MNGQDIDGRNITVNEA 84
>gi|156837267|ref|XP_001642663.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113219|gb|EDO14805.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 526
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 11/174 (6%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 219
K+F+G L ++ E L F K G V +++ + T RSRGFGF+T ++ V+
Sbjct: 156 CKMFIGGLNWETTEETLRDYFNKYGKVVELKIMKDNNTGRSRGFGFLTFEDATSVDEVVK 215
Query: 220 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 279
H +DG+++ +A PR Q + +I+VG + +V E F+++G
Sbjct: 216 TQHI--LDGKVIDPKRAIPREEQDKTG--------KIFVGGIGADVRPKEFEDFFAQYGT 265
Query: 280 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
+++A+++ D++TGRSRGFGFVT S + D + G+ I + AE R
Sbjct: 266 IIDAQLMLDKDTGRSRGFGFVTYDSPDAV-DRVCQNKFIEFKGKQIEIKRAEPR 318
>gi|8671754|gb|AAF78364.1|AF181719_1 DAZ associated protein 1 [Homo sapiens]
Length = 407
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
E KLFVG L + E L F + G V ++ ++ T++SRGFGFV
Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD-PNCVGT 66
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPER---------APRV-FEPGFRIYVGNLPWEVDN 267
V + +DGR + PRG QPER PR + +I+VG +P
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDYSKSNKIFVGGIPHNCGE 126
Query: 268 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 327
L + F + G V ++YD E R RGFGF+T E ++ A+ + ++ G+ + V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVEV 185
Query: 328 NVAEDRQRRS 337
AE R +S
Sbjct: 186 KRAEPRDSKS 195
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 231 LTVNKAAPRGTQPERAPRVFEPG----FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV 286
L + A G +P VF ++++G L W VD+ +L + FS G+V ARV+
Sbjct: 10 LLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVI 69
Query: 287 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 333
DRETGRSRGFGFV S +AI+A+DG+ +DGR +RVN+A +R
Sbjct: 70 TDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 116
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 46/79 (58%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 220
KLF+G L + VD KL F G V A VI +RET RSRGFGFV S + A++A+
Sbjct: 38 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 97
Query: 221 FHRYDIDGRLLTVNKAAPR 239
+IDGR + VN A R
Sbjct: 98 MDGKEIDGRQVRVNMANER 116
>gi|390598799|gb|EIN08196.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 485
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 17/181 (9%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 217
++ K+F+G L +D E L FE+ G V+ A I RSR F F+T + A
Sbjct: 130 DEGKMFIGGLHWDTTDEALKSYFEQFGKVD-ACTIMRDANGRSRCFAFLTFE--DPASVN 186
Query: 218 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 277
M + +DG+++ +A PR T+ +RA ++F +G L V + + + FS+
Sbjct: 187 AVMVREHILDGKIIDPKRAIPR-TEHQRATKLF-------IGGLAGSVTSESMREFFSQF 238
Query: 278 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL--DGRAIRVNVAEDRQR 335
GKV ++ V+ DRETGRS+GFGF+++ E D L NL DG+ I V +A+ R +
Sbjct: 239 GKVTDSTVMLDRETGRSKGFGFISL----EDVDVTPILGFGNLEIDGKLIDVKLAQPRFQ 294
Query: 336 R 336
R
Sbjct: 295 R 295
>gi|366990603|ref|XP_003675069.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
gi|342300933|emb|CCC68698.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 111/219 (50%), Gaps = 19/219 (8%)
Query: 125 EPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPE---------DAKLFVGNLPYDVDSEK 175
EPE D V EA E+S E +E V P D L+VGNL ++ +
Sbjct: 43 EPESADPVSEAPAAGEQSAEN----QESSVVPASATQGGRETSDRVLYVGNLDKSINEDL 98
Query: 176 LAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK 235
L F+ G + +++ +++ + + + F+ +A A++ + I+G+ + +N
Sbjct: 99 LKQYFQVGGQITDVKIMVDKK-NNNVNYAFIEYLKSHDANVALQTLNGIQIEGKTVRINW 157
Query: 236 AAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 295
A + Q + + F ++VG+L +VD+ L F + V A V++D +TGRSR
Sbjct: 158 AF-QSQQTTNS----DDTFNLFVGDLNVDVDDETLSHAFDQFPSYVQAHVMWDMQTGRSR 212
Query: 296 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
G+GFV+ + + + +A+ + G ++GRA+R+N A R+
Sbjct: 213 GYGFVSFADQEQAQEAMNVMQGMPINGRAVRINWATKRE 251
>gi|398407815|ref|XP_003855373.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
gi|339475257|gb|EGP90349.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
Length = 401
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 6/183 (3%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGF--GFVTMSTVEEA 214
P L+VG L V + L +FE G V+ ++I ++ +S+GF GFV A
Sbjct: 66 PNKRALYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPDKNF-QSKGFNYGFVEYDDPGAA 124
Query: 215 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 274
E+A++ + + + + VN A T + F I+VG+L EV++ L Q F
Sbjct: 125 ERAMQTLNGRRVHQQEIRVNWAYQSNTTSKEDTSNH---FHIFVGDLSNEVNDEVLLQAF 181
Query: 275 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 334
S G V ARV++D +TGRSRG+GFV + A++++DG+ L RAIR N A +
Sbjct: 182 SAFGTVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKG 241
Query: 335 RRS 337
+ S
Sbjct: 242 QPS 244
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 41/212 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +V+ E L F GTV A V+++ +T RSRG+GFV +AEKA+
Sbjct: 163 IFVGDLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSM 222
Query: 222 HRYDIDGRLLTVNKAAPRGTQ-------------------------PERAPRVFE----- 251
+ R + N A +G P + + +E
Sbjct: 223 DGEWLGSRAIRCNWANQKGQPSFSQQQAMVQMGMTPTTPYGGHHSFPTQGAQSYEMIVQQ 282
Query: 252 -PGFR--IYVGNL-PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 307
P ++ YVGNL P+ N L +F G V R DR GF F+ M +
Sbjct: 283 TPQWQTTCYVGNLTPYTTQN-DLVPLFQNFGYVTETRFQSDR------GFAFIKMDTHEN 335
Query: 308 LNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
+AI L G ++GR ++ + +DR F
Sbjct: 336 AANAICQLSGYQVNGRPLKCSWGKDRPPTGQF 367
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 92/182 (50%), Gaps = 4/182 (2%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRE-TDRSRGFGFVTMSTVEEAE 215
P L+VG L V + L +FE G V ++I ++ T + +GFV AE
Sbjct: 88 PNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAAE 147
Query: 216 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 275
+A++ + I + VN A + + F I+VG+L EV++ L Q FS
Sbjct: 148 RAMQTLNGRRIHQSEIRVNWAYQSNSTSKEDTSNH---FHIFVGDLSNEVNDEVLTQAFS 204
Query: 276 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 335
G V ARV++D +TGRSRG+GFV E + A+ ++DG+ L RAIR N A + +
Sbjct: 205 AFGSVSEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEWLGSRAIRCNWANQKGQ 264
Query: 336 RS 337
S
Sbjct: 265 PS 266
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 221
+FVG+L +V+ E L F G+V A V+++ +T RSRG+GFV EA+KA+
Sbjct: 185 IFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSM 244
Query: 222 HRYDIDGRLLTVNKAAPRGTQ------------------------PERAPRVFE------ 251
+ R + N A +G P + ++
Sbjct: 245 DGEWLGSRAIRCNWANQKGQPSISQQQALVAMGMTPTTPFGHHHFPTHGIQSYDMVAQQT 304
Query: 252 PGFR--IYVGNL-PWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 308
P ++ YVGNL P+ N L +F G V+ R+ DR GF FV M S
Sbjct: 305 PQWQTTCYVGNLTPYTTQN-DLVPLFQNFGYVLETRLQADR------GFAFVKMDSHENA 357
Query: 309 NDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 339
AI L+G N++GR ++ + +DR F
Sbjct: 358 ASAICQLNGYNVNGRPLKCSWGKDRPPTGQF 388
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.130 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,368,997,873
Number of Sequences: 23463169
Number of extensions: 244258970
Number of successful extensions: 1230335
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 19089
Number of HSP's successfully gapped in prelim test: 11234
Number of HSP's that attempted gapping in prelim test: 1033145
Number of HSP's gapped (non-prelim): 122590
length of query: 339
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 196
effective length of database: 9,003,962,200
effective search space: 1764776591200
effective search space used: 1764776591200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 77 (34.3 bits)