Query 019543
Match_columns 339
No_of_seqs 266 out of 2227
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 02:36:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019543.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019543hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0626 MetC Cystathionine bet 100.0 4.5E-70 9.7E-75 510.6 36.2 332 6-337 5-395 (396)
2 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 1.9E-67 4.1E-72 498.6 33.9 326 10-335 1-386 (386)
3 COG2873 MET17 O-acetylhomoseri 100.0 3.1E-67 6.8E-72 472.4 28.8 333 5-337 4-426 (426)
4 PRK08861 cystathionine gamma-s 100.0 2.4E-64 5.2E-69 479.8 37.3 331 7-337 4-384 (388)
5 PLN02509 cystathionine beta-ly 100.0 1.2E-63 2.5E-68 482.6 38.3 337 3-339 81-464 (464)
6 PRK08574 cystathionine gamma-s 100.0 4E-62 8.6E-67 465.6 38.0 330 8-337 2-385 (385)
7 PRK06702 O-acetylhomoserine am 100.0 1.7E-62 3.6E-67 470.6 35.5 332 5-336 3-424 (432)
8 PRK08114 cystathionine beta-ly 100.0 4.7E-62 1E-66 462.6 34.8 326 7-337 4-394 (395)
9 PRK06176 cystathionine gamma-s 100.0 1.6E-61 3.4E-66 460.7 38.0 330 8-337 2-379 (380)
10 KOG0053 Cystathionine beta-lya 100.0 4E-62 8.7E-67 451.4 32.8 330 8-338 21-408 (409)
11 PRK08045 cystathionine gamma-s 100.0 2.8E-61 6.1E-66 459.6 37.8 330 8-337 4-383 (386)
12 PRK08248 O-acetylhomoserine am 100.0 2.4E-61 5.1E-66 465.4 36.2 337 1-337 1-428 (431)
13 TIGR01329 cysta_beta_ly_E cyst 100.0 5.2E-61 1.1E-65 457.3 37.7 330 9-338 1-377 (378)
14 PRK08249 cystathionine gamma-s 100.0 3.7E-61 8E-66 460.6 36.7 330 7-337 7-394 (398)
15 PRK05967 cystathionine beta-ly 100.0 5.5E-61 1.2E-65 455.7 35.9 326 5-337 9-392 (395)
16 PRK09028 cystathionine beta-ly 100.0 4.7E-61 1E-65 456.9 35.4 324 9-337 5-388 (394)
17 PRK07812 O-acetylhomoserine am 100.0 1E-60 2.2E-65 460.6 36.1 331 7-337 12-432 (436)
18 TIGR02080 O_succ_thio_ly O-suc 100.0 2.4E-60 5.1E-65 453.0 37.9 329 8-336 3-381 (382)
19 PRK05613 O-acetylhomoserine am 100.0 1.6E-60 3.5E-65 459.2 36.0 334 4-337 9-437 (437)
20 TIGR01328 met_gam_lyase methio 100.0 2.2E-60 4.8E-65 454.7 36.4 329 8-337 3-391 (391)
21 PRK07671 cystathionine beta-ly 100.0 6.2E-60 1.3E-64 449.6 38.3 327 9-335 3-377 (377)
22 PRK06434 cystathionine gamma-l 100.0 2.9E-60 6.3E-65 450.5 35.7 322 7-336 7-384 (384)
23 PRK07810 O-succinylhomoserine 100.0 4.6E-60 1E-64 453.7 37.0 329 6-334 13-402 (403)
24 PRK08776 cystathionine gamma-s 100.0 1.8E-59 3.8E-64 449.7 37.6 333 5-337 9-391 (405)
25 PRK08134 O-acetylhomoserine am 100.0 1.6E-59 3.4E-64 452.7 36.8 335 4-338 4-429 (433)
26 PRK06084 O-acetylhomoserine am 100.0 1.2E-59 2.6E-64 453.2 35.8 329 9-337 3-423 (425)
27 PRK07504 O-succinylhomoserine 100.0 3.3E-59 7.2E-64 447.6 36.9 333 5-337 7-396 (398)
28 TIGR01324 cysta_beta_ly_B cyst 100.0 4E-59 8.6E-64 443.3 37.1 321 11-337 1-377 (377)
29 PRK08133 O-succinylhomoserine 100.0 1E-58 2.2E-63 443.4 36.4 331 5-336 3-390 (390)
30 PRK07811 cystathionine gamma-s 100.0 3E-58 6.6E-63 439.8 37.7 329 5-336 9-388 (388)
31 PRK05939 hypothetical protein; 100.0 2.4E-58 5.2E-63 440.7 36.3 314 23-336 7-396 (397)
32 PRK05994 O-acetylhomoserine am 100.0 5.1E-58 1.1E-62 442.6 37.1 331 6-336 5-426 (427)
33 TIGR01325 O_suc_HS_sulf O-succ 100.0 8.3E-58 1.8E-62 436.0 37.3 324 10-334 1-380 (380)
34 PRK07269 cystathionine gamma-s 100.0 9.7E-58 2.1E-62 432.1 36.6 317 1-335 1-363 (364)
35 PRK07503 methionine gamma-lyas 100.0 7.8E-58 1.7E-62 438.8 36.2 329 7-336 8-396 (403)
36 PRK07049 methionine gamma-lyas 100.0 1.1E-57 2.4E-62 440.0 37.2 330 6-336 15-426 (427)
37 PRK06767 methionine gamma-lyas 100.0 1.1E-57 2.4E-62 436.0 36.8 325 6-337 3-386 (386)
38 PRK06460 hypothetical protein; 100.0 1.9E-57 4.2E-62 432.5 37.6 325 8-337 2-375 (376)
39 cd00614 CGS_like CGS_like: Cys 100.0 1.7E-57 3.8E-62 432.6 35.6 312 24-335 1-369 (369)
40 PRK08064 cystathionine beta-ly 100.0 8.7E-57 1.9E-61 430.0 38.4 331 7-337 5-383 (390)
41 PRK06234 methionine gamma-lyas 100.0 5E-57 1.1E-61 433.0 36.6 329 8-337 8-398 (400)
42 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 9.7E-57 2.1E-61 433.4 36.6 327 9-335 2-418 (418)
43 PRK07050 cystathionine beta-ly 100.0 1.3E-56 2.8E-61 428.9 35.5 326 5-336 6-391 (394)
44 PLN02242 methionine gamma-lyas 100.0 2.9E-55 6.3E-60 421.8 33.9 329 7-339 16-418 (418)
45 PRK07582 cystathionine gamma-l 100.0 5.1E-54 1.1E-58 407.9 36.4 318 8-337 3-366 (366)
46 PRK05968 hypothetical protein; 100.0 7E-54 1.5E-58 409.8 35.3 319 12-337 12-387 (389)
47 PRK08247 cystathionine gamma-s 100.0 3.2E-53 7E-58 402.6 35.9 315 7-337 3-365 (366)
48 COG0156 BioF 7-keto-8-aminopel 100.0 2.5E-28 5.5E-33 229.6 22.7 247 47-337 73-387 (388)
49 COG0399 WecE Predicted pyridox 99.9 4.4E-25 9.4E-30 206.3 20.7 264 53-336 32-369 (374)
50 PLN02955 8-amino-7-oxononanoat 99.9 8.2E-25 1.8E-29 210.4 22.4 233 54-336 146-457 (476)
51 PLN03227 serine palmitoyltrans 99.9 1.4E-23 2.9E-28 201.3 24.3 254 49-336 39-378 (392)
52 PF01041 DegT_DnrJ_EryC1: DegT 99.9 1.8E-23 4E-28 198.6 17.6 264 54-335 24-363 (363)
53 PRK13034 serine hydroxymethylt 99.9 9.8E-23 2.1E-27 196.8 21.8 252 45-335 58-387 (416)
54 PLN02483 serine palmitoyltrans 99.9 3.3E-22 7.2E-27 196.5 24.8 240 53-335 144-461 (489)
55 TIGR01822 2am3keto_CoA 2-amino 99.9 4.1E-22 8.8E-27 191.2 24.3 248 46-336 71-385 (393)
56 KOG1359 Glycine C-acetyltransf 99.9 1.3E-22 2.7E-27 178.4 14.8 248 46-336 100-408 (417)
57 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.9E-21 4.1E-26 183.6 22.5 260 53-335 16-352 (352)
58 TIGR02379 ECA_wecE TDP-4-keto- 99.9 3.8E-21 8.3E-26 183.3 24.3 268 53-336 29-373 (376)
59 COG0520 csdA Selenocysteine ly 99.9 5.7E-21 1.2E-25 182.7 22.8 250 55-337 66-402 (405)
60 TIGR03588 PseC UDP-4-keto-6-de 99.9 6.4E-21 1.4E-25 182.3 22.6 264 53-336 27-378 (380)
61 PRK15407 lipopolysaccharide bi 99.9 1.1E-20 2.4E-25 183.2 23.4 216 53-282 61-377 (438)
62 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 2E-20 4.4E-25 178.6 24.4 267 53-336 29-372 (375)
63 TIGR03576 pyridox_MJ0158 pyrid 99.9 2.7E-20 5.8E-25 175.5 23.6 235 53-334 52-345 (346)
64 PLN02822 serine palmitoyltrans 99.9 1.8E-20 4E-25 183.8 23.2 244 53-336 152-473 (481)
65 KOG1360 5-aminolevulinate synt 99.9 4.6E-21 1E-25 174.7 16.4 238 53-335 214-519 (570)
66 PRK07179 hypothetical protein; 99.9 4.6E-20 1E-24 178.0 24.4 238 54-336 98-394 (407)
67 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1E-19 2.2E-24 174.0 25.8 264 53-336 31-375 (379)
68 PRK13393 5-aminolevulinate syn 99.9 4.5E-20 9.7E-25 178.0 22.9 239 54-336 89-392 (406)
69 PRK13392 5-aminolevulinate syn 99.9 4.3E-20 9.3E-25 178.4 22.5 238 55-336 91-393 (410)
70 TIGR01821 5aminolev_synth 5-am 99.9 9.1E-20 2E-24 175.6 23.6 240 53-336 88-392 (402)
71 PRK09064 5-aminolevulinate syn 99.9 1.2E-19 2.7E-24 175.0 22.9 240 53-336 89-393 (407)
72 PRK06939 2-amino-3-ketobutyrat 99.8 2.3E-19 4.9E-24 172.2 23.9 242 53-337 85-394 (397)
73 cd06454 KBL_like KBL_like; thi 99.8 3E-19 6.5E-24 168.3 23.9 243 52-337 43-348 (349)
74 TIGR00858 bioF 8-amino-7-oxono 99.8 5.9E-19 1.3E-23 166.8 24.8 239 53-335 59-360 (360)
75 PRK05958 8-amino-7-oxononanoat 99.8 8.6E-19 1.9E-23 167.4 24.7 241 52-336 81-383 (385)
76 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 6.8E-19 1.5E-23 167.8 23.1 205 54-278 50-333 (370)
77 PRK13580 serine hydroxymethylt 99.8 4.9E-19 1.1E-23 170.8 21.2 245 53-335 89-444 (493)
78 COG0436 Aspartate/tyrosine/aro 99.8 1.3E-18 2.8E-23 166.4 23.9 239 46-322 60-375 (393)
79 TIGR01825 gly_Cac_T_rel pyrido 99.8 1.4E-18 3E-23 166.2 24.3 245 47-335 70-376 (385)
80 PLN02721 threonine aldolase 99.8 1.2E-18 2.5E-23 164.7 22.2 237 53-336 38-348 (353)
81 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 1.9E-18 4.1E-23 165.7 23.7 213 48-278 56-346 (387)
82 PRK00011 glyA serine hydroxyme 99.8 1.2E-18 2.7E-23 168.5 22.1 209 53-282 65-344 (416)
83 TIGR00474 selA seryl-tRNA(sec) 99.8 3.7E-19 8.1E-24 172.3 17.0 167 54-224 121-371 (454)
84 PRK05957 aspartate aminotransf 99.8 5.8E-18 1.3E-22 162.4 24.8 251 47-336 61-385 (389)
85 PRK10874 cysteine sulfinate de 99.8 7.1E-18 1.5E-22 162.4 24.8 245 55-336 63-394 (401)
86 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 5.7E-18 1.2E-22 160.8 23.6 240 52-336 41-358 (361)
87 PRK06207 aspartate aminotransf 99.8 7.7E-18 1.7E-22 162.4 23.9 249 47-335 74-401 (405)
88 PRK07324 transaminase; Validat 99.8 8.1E-18 1.8E-22 160.5 23.3 223 57-321 64-353 (373)
89 cd06453 SufS_like Cysteine des 99.8 8.5E-18 1.8E-22 160.1 22.7 245 55-334 43-373 (373)
90 PRK09295 bifunctional cysteine 99.8 1.2E-17 2.6E-22 161.1 24.0 246 55-336 67-400 (406)
91 TIGR01977 am_tr_V_EF2568 cyste 99.8 9E-18 2E-22 160.1 22.6 252 55-336 44-375 (376)
92 cd00609 AAT_like Aspartate ami 99.8 1.7E-17 3.8E-22 155.6 24.2 242 53-335 34-349 (350)
93 PRK06108 aspartate aminotransf 99.8 1.7E-17 3.7E-22 158.6 23.7 234 47-320 57-364 (382)
94 COG1167 ARO8 Transcriptional r 99.8 1.6E-17 3.4E-22 162.3 23.5 236 55-328 136-444 (459)
95 TIGR03392 FeS_syn_CsdA cystein 99.8 8.6E-18 1.9E-22 161.6 21.3 245 55-336 60-391 (398)
96 cd00378 SHMT Serine-glycine hy 99.8 1.5E-17 3.4E-22 160.0 22.3 208 53-281 59-339 (402)
97 PRK07681 aspartate aminotransf 99.8 2.9E-17 6.3E-22 158.1 23.7 237 57-336 71-384 (399)
98 TIGR01979 sufS cysteine desulf 99.8 2.2E-17 4.7E-22 159.1 21.9 249 55-336 62-397 (403)
99 COG2008 GLY1 Threonine aldolas 99.8 4.7E-17 1E-21 148.4 22.5 240 47-337 29-340 (342)
100 PLN02855 Bifunctional selenocy 99.8 2.7E-17 5.9E-22 159.5 22.2 251 55-336 76-414 (424)
101 PRK05937 8-amino-7-oxononanoat 99.8 4.9E-17 1.1E-21 155.0 22.7 229 53-336 54-346 (370)
102 KOG1368 Threonine aldolase [Am 99.8 8.4E-18 1.8E-22 148.5 15.4 255 31-334 26-362 (384)
103 PRK08960 hypothetical protein; 99.8 1.1E-16 2.4E-21 153.5 24.3 231 56-326 70-374 (387)
104 PRK05764 aspartate aminotransf 99.8 1.3E-16 2.7E-21 153.2 24.0 238 56-335 69-390 (393)
105 TIGR01976 am_tr_V_VC1184 cyste 99.8 3.4E-17 7.4E-22 157.3 19.8 247 55-334 60-397 (397)
106 PRK04311 selenocysteine syntha 99.8 6.2E-18 1.3E-22 164.3 14.7 168 54-225 126-377 (464)
107 PLN03226 serine hydroxymethylt 99.8 3.8E-17 8.3E-22 159.7 20.0 255 46-335 65-418 (475)
108 cd06451 AGAT_like Alanine-glyo 99.8 9.7E-17 2.1E-21 151.9 22.2 241 55-336 32-353 (356)
109 TIGR03540 DapC_direct LL-diami 99.8 2.2E-16 4.7E-21 151.2 24.4 233 58-336 70-379 (383)
110 PLN00175 aminotransferase fami 99.8 2.1E-16 4.6E-21 152.8 24.3 207 57-283 93-376 (413)
111 PRK08361 aspartate aminotransf 99.8 8.8E-17 1.9E-21 154.3 21.4 226 55-320 70-372 (391)
112 TIGR01437 selA_rel uncharacter 99.8 9.4E-17 2E-21 152.6 21.1 244 53-337 43-362 (363)
113 cd06502 TA_like Low-specificit 99.8 7.4E-17 1.6E-21 151.4 20.2 234 53-336 30-337 (338)
114 TIGR03539 DapC_actino succinyl 99.8 2.7E-16 5.9E-21 149.1 24.3 233 55-336 60-355 (357)
115 PRK07682 hypothetical protein; 99.8 1.1E-16 2.4E-21 152.9 21.5 240 55-335 57-375 (378)
116 PRK07550 hypothetical protein; 99.8 2.7E-16 5.8E-21 150.7 24.1 238 57-336 73-383 (386)
117 PRK07865 N-succinyldiaminopime 99.8 2.6E-16 5.7E-21 149.6 23.6 233 55-336 66-361 (364)
118 PRK12414 putative aminotransfe 99.8 2.9E-16 6.4E-21 150.4 24.1 240 53-336 68-380 (384)
119 PRK15481 transcriptional regul 99.8 2.1E-16 4.6E-21 153.6 23.0 234 58-334 124-429 (431)
120 PRK06225 aspartate aminotransf 99.7 3.9E-16 8.4E-21 149.3 23.8 242 56-336 67-376 (380)
121 PLN02187 rooty/superroot1 99.7 6.1E-16 1.3E-20 151.4 25.3 241 55-335 108-437 (462)
122 PRK06348 aspartate aminotransf 99.7 6.3E-16 1.4E-20 148.1 24.9 222 58-320 69-367 (384)
123 TIGR01141 hisC histidinol-phos 99.7 1.5E-16 3.3E-21 150.0 20.0 234 53-335 52-346 (346)
124 TIGR03402 FeS_nifS cysteine de 99.7 4.6E-16 1E-20 148.6 23.4 253 55-336 42-368 (379)
125 TIGR03537 DapC succinyldiamino 99.7 7.4E-16 1.6E-20 145.8 24.5 208 57-284 38-320 (350)
126 PRK08068 transaminase; Reviewe 99.7 5.2E-16 1.1E-20 148.9 23.3 224 56-321 71-372 (389)
127 COG0112 GlyA Glycine/serine hy 99.7 1.2E-16 2.6E-21 146.8 17.5 259 45-336 56-390 (413)
128 PRK08912 hypothetical protein; 99.7 5.4E-16 1.2E-20 148.7 23.0 225 58-321 66-369 (387)
129 PRK06290 aspartate aminotransf 99.7 7.8E-16 1.7E-20 148.6 24.1 237 57-337 83-406 (410)
130 PRK10534 L-threonine aldolase; 99.7 1.5E-16 3.3E-21 149.3 18.5 205 53-281 32-303 (333)
131 PRK09276 LL-diaminopimelate am 99.7 7.4E-16 1.6E-20 147.6 23.5 222 58-320 72-370 (385)
132 PRK06425 histidinol-phosphate 99.7 2.4E-16 5.2E-21 148.1 19.7 238 49-336 34-329 (332)
133 PRK07568 aspartate aminotransf 99.7 1.2E-15 2.7E-20 146.6 24.9 244 56-337 67-393 (397)
134 PRK05664 threonine-phosphate d 99.7 7.5E-16 1.6E-20 144.6 22.6 196 58-280 52-296 (330)
135 PRK07337 aminotransferase; Val 99.7 8.1E-16 1.7E-20 147.5 23.2 225 57-320 69-371 (388)
136 PRK09082 methionine aminotrans 99.7 4.8E-16 1E-20 149.0 21.5 227 55-320 71-371 (386)
137 PLN02651 cysteine desulfurase 99.7 6.4E-16 1.4E-20 147.0 22.0 247 54-327 42-363 (364)
138 PRK14807 histidinol-phosphate 99.7 6.8E-16 1.5E-20 146.1 21.9 235 52-336 56-348 (351)
139 PRK07777 aminotransferase; Val 99.7 1.3E-15 2.8E-20 146.1 23.9 226 57-320 63-368 (387)
140 PLN00145 tyrosine/nicotianamin 99.7 2E-15 4.4E-20 146.6 25.5 225 56-320 95-406 (430)
141 PRK05942 aspartate aminotransf 99.7 1.2E-15 2.6E-20 146.6 23.6 230 58-330 76-383 (394)
142 TIGR01140 L_thr_O3P_dcar L-thr 99.7 7.4E-16 1.6E-20 144.6 21.5 238 48-335 40-330 (330)
143 PRK05387 histidinol-phosphate 99.7 1.1E-15 2.3E-20 144.6 22.6 204 55-280 60-319 (353)
144 PRK02948 cysteine desulfurase; 99.7 1.5E-15 3.3E-20 145.2 23.8 256 55-336 43-370 (381)
145 PRK02731 histidinol-phosphate 99.7 3.2E-16 7E-21 149.0 19.0 207 54-283 66-335 (367)
146 PRK00854 rocD ornithine--oxo-a 99.7 7.2E-16 1.6E-20 148.5 21.4 237 53-336 81-397 (401)
147 TIGR01265 tyr_nico_aTase tyros 99.7 2.9E-15 6.3E-20 144.4 25.6 225 55-321 73-384 (403)
148 TIGR02006 IscS cysteine desulf 99.7 1.2E-15 2.6E-20 147.0 22.8 252 55-336 47-373 (402)
149 PF00155 Aminotran_1_2: Aminot 99.7 1.3E-15 2.9E-20 144.4 22.7 231 56-333 45-362 (363)
150 KOG1357 Serine palmitoyltransf 99.7 7.7E-18 1.7E-22 156.1 7.1 241 53-336 180-498 (519)
151 TIGR02326 transamin_PhnW 2-ami 99.7 1.2E-15 2.5E-20 145.0 22.2 239 55-336 35-358 (363)
152 PRK06107 aspartate aminotransf 99.7 1.9E-15 4.1E-20 145.6 23.9 171 55-227 74-317 (402)
153 PRK07366 succinyldiaminopimela 99.7 1.7E-15 3.7E-20 145.3 23.4 208 57-284 70-357 (388)
154 PRK07683 aminotransferase A; V 99.7 1.8E-15 3.8E-20 145.2 23.4 224 55-320 65-365 (387)
155 PLN02656 tyrosine transaminase 99.7 3.2E-15 7E-20 144.4 25.4 169 56-226 74-324 (409)
156 PF00266 Aminotran_5: Aminotra 99.7 8.3E-16 1.8E-20 146.5 21.0 244 54-330 42-371 (371)
157 cd00613 GDC-P Glycine cleavage 99.7 9.4E-16 2E-20 147.3 21.2 239 53-334 62-398 (398)
158 PTZ00094 serine hydroxymethylt 99.7 9.1E-16 2E-20 150.0 21.4 244 53-335 74-403 (452)
159 PRK14012 cysteine desulfurase; 99.7 2.3E-15 4.9E-20 145.2 23.8 252 55-336 49-375 (404)
160 TIGR03301 PhnW-AepZ 2-aminoeth 99.7 2.5E-15 5.4E-20 141.8 23.6 240 55-336 31-353 (355)
161 PRK09148 aminotransferase; Val 99.7 2.7E-15 5.8E-20 144.7 24.2 226 58-325 71-376 (405)
162 PRK08056 threonine-phosphate d 99.7 1.8E-15 3.9E-20 143.5 22.2 234 56-334 56-353 (356)
163 PRK08175 aminotransferase; Val 99.7 1.9E-15 4.1E-20 145.4 22.4 238 57-335 69-388 (395)
164 PRK00950 histidinol-phosphate 99.7 8.6E-16 1.9E-20 145.7 19.8 232 54-336 68-358 (361)
165 PRK06358 threonine-phosphate d 99.7 3.5E-15 7.6E-20 141.4 23.9 233 55-333 54-352 (354)
166 PLN03026 histidinol-phosphate 99.7 2E-15 4.3E-20 144.4 22.4 236 52-336 83-378 (380)
167 TIGR01264 tyr_amTase_E tyrosin 99.7 2.4E-15 5.2E-20 144.9 23.0 239 56-336 74-399 (401)
168 PTZ00433 tyrosine aminotransfe 99.7 4.9E-15 1.1E-19 143.2 24.8 223 57-321 77-391 (412)
169 PRK09147 succinyldiaminopimela 99.7 3.9E-15 8.4E-20 143.2 23.8 229 55-321 69-379 (396)
170 PRK08363 alanine aminotransfer 99.7 4.5E-15 9.7E-20 142.8 24.1 241 55-335 70-393 (398)
171 PRK08636 aspartate aminotransf 99.7 6.6E-15 1.4E-19 141.9 24.9 224 56-320 76-382 (403)
172 TIGR03403 nifS_epsilon cystein 99.7 2.1E-15 4.6E-20 144.3 20.7 199 112-336 160-371 (382)
173 TIGR03812 tyr_de_CO2_Arch tyro 99.7 4.3E-15 9.3E-20 141.5 22.3 235 54-337 58-373 (373)
174 TIGR00707 argD acetylornithine 99.7 1.2E-15 2.7E-20 145.6 18.6 237 51-336 65-377 (379)
175 PRK07309 aromatic amino acid a 99.7 7.5E-15 1.6E-19 141.0 23.9 239 57-336 69-388 (391)
176 PRK03158 histidinol-phosphate 99.7 2.8E-15 6E-20 142.2 20.4 232 54-336 63-357 (359)
177 cd00610 OAT_like Acetyl ornith 99.7 2.6E-15 5.7E-20 144.9 20.1 238 53-336 77-411 (413)
178 PLN00143 tyrosine/nicotianamin 99.7 1.4E-14 3E-19 140.0 24.5 237 58-334 77-402 (409)
179 PRK04781 histidinol-phosphate 99.7 5.3E-15 1.2E-19 140.7 20.9 238 49-335 53-358 (364)
180 TIGR03538 DapC_gpp succinyldia 99.7 1.3E-14 2.7E-19 139.5 23.2 190 73-285 93-357 (393)
181 PRK06855 aminotransferase; Val 99.7 2.4E-14 5.3E-19 139.2 25.4 172 55-227 77-328 (433)
182 PRK09265 aminotransferase AlaT 99.7 1.9E-14 4.2E-19 138.7 24.4 241 57-336 74-401 (404)
183 PRK08354 putative aminotransfe 99.7 8.5E-15 1.9E-19 136.3 21.1 111 56-168 41-196 (311)
184 PRK08153 histidinol-phosphate 99.7 1.1E-14 2.4E-19 138.8 22.3 203 55-280 67-331 (369)
185 PRK06959 putative threonine-ph 99.7 7.4E-15 1.6E-19 138.4 20.7 232 49-335 48-332 (339)
186 COG1104 NifS Cysteine sulfinat 99.7 4.4E-15 9.6E-20 138.3 18.6 264 47-336 36-373 (386)
187 PRK13479 2-aminoethylphosphona 99.7 1.1E-14 2.4E-19 138.5 21.8 210 55-282 37-329 (368)
188 PF06838 Met_gamma_lyase: Meth 99.7 9.8E-15 2.1E-19 133.4 20.2 210 45-274 47-332 (403)
189 PRK04870 histidinol-phosphate 99.7 7.5E-15 1.6E-19 139.2 20.4 232 55-336 63-354 (356)
190 PTZ00377 alanine aminotransfer 99.7 5.1E-14 1.1E-18 138.8 26.2 170 57-228 117-389 (481)
191 PRK05839 hypothetical protein; 99.7 2.3E-14 5E-19 136.9 22.4 219 55-320 64-356 (374)
192 cd06450 DOPA_deC_like DOPA dec 99.7 4E-15 8.8E-20 140.1 16.8 164 112-337 168-345 (345)
193 PRK13238 tnaA tryptophanase/L- 99.6 2.4E-14 5.3E-19 139.7 22.1 174 48-228 73-338 (460)
194 PRK04635 histidinol-phosphate 99.6 1.5E-14 3.2E-19 137.1 19.9 237 49-336 54-351 (354)
195 PRK07392 threonine-phosphate d 99.6 3.8E-14 8.3E-19 134.6 22.7 232 55-332 57-355 (360)
196 PRK06836 aspartate aminotransf 99.6 5.2E-14 1.1E-18 135.3 23.8 236 55-336 73-391 (394)
197 PRK01688 histidinol-phosphate 99.6 9E-15 2E-19 138.5 18.2 238 49-335 51-351 (351)
198 PLN02450 1-aminocyclopropane-1 99.6 3.2E-14 6.9E-19 139.6 22.6 237 58-337 89-431 (468)
199 PLN02376 1-aminocyclopropane-1 99.6 7.1E-14 1.5E-18 137.8 24.6 222 71-334 120-436 (496)
200 PLN02409 serine--glyoxylate am 99.6 2.9E-14 6.2E-19 137.4 21.3 242 54-335 41-367 (401)
201 PRK05166 histidinol-phosphate 99.6 2.3E-14 5E-19 136.6 20.3 229 56-331 72-366 (371)
202 TIGR03235 DNA_S_dndA cysteine 99.6 2.6E-14 5.6E-19 135.3 20.5 235 55-318 42-353 (353)
203 cd00617 Tnase_like Tryptophana 99.6 4.5E-14 9.9E-19 136.2 22.1 168 53-224 51-310 (431)
204 PRK01278 argD acetylornithine 99.6 2.2E-14 4.7E-19 137.7 19.8 208 52-279 70-354 (389)
205 PRK07590 L,L-diaminopimelate a 99.6 6.5E-14 1.4E-18 135.3 23.0 208 56-283 77-377 (409)
206 PRK14808 histidinol-phosphate 99.6 2.7E-14 5.9E-19 134.3 19.7 224 54-336 55-333 (335)
207 PRK03321 putative aminotransfe 99.6 2.6E-14 5.5E-19 135.3 19.6 230 54-335 56-350 (352)
208 PRK02610 histidinol-phosphate 99.6 2.5E-14 5.5E-19 136.5 19.7 231 55-337 66-372 (374)
209 PRK13520 L-tyrosine decarboxyl 99.6 4.5E-14 9.7E-19 134.3 21.1 232 56-336 60-367 (371)
210 PRK13237 tyrosine phenol-lyase 99.6 7.3E-14 1.6E-18 133.7 22.4 171 47-224 72-335 (460)
211 PRK13355 bifunctional HTH-doma 99.6 1.6E-13 3.5E-18 136.4 25.8 170 57-228 187-437 (517)
212 PRK14809 histidinol-phosphate 99.6 4.6E-14 9.9E-19 133.9 20.8 199 56-283 66-326 (357)
213 TIGR02618 tyr_phenol_ly tyrosi 99.6 1.6E-13 3.5E-18 131.0 24.3 173 48-228 66-331 (450)
214 PLN02271 serine hydroxymethylt 99.6 4.1E-14 8.9E-19 137.6 20.2 259 46-335 179-539 (586)
215 PRK01533 histidinol-phosphate 99.6 1.7E-14 3.6E-19 137.4 17.3 227 54-335 63-354 (366)
216 PRK07908 hypothetical protein; 99.6 1.4E-13 3E-18 130.2 23.4 232 56-336 59-347 (349)
217 PRK09105 putative aminotransfe 99.6 2.9E-14 6.2E-19 136.0 18.6 200 54-279 77-336 (370)
218 PRK03244 argD acetylornithine 99.6 6.3E-14 1.4E-18 134.8 21.1 235 51-334 81-388 (398)
219 PRK03317 histidinol-phosphate 99.6 7.7E-14 1.7E-18 132.9 21.1 228 55-334 65-362 (368)
220 PRK09440 avtA valine--pyruvate 99.6 1.2E-13 2.5E-18 133.8 22.3 249 55-336 78-411 (416)
221 COG1168 MalY Bifunctional PLP- 99.6 7.7E-13 1.7E-17 121.5 25.6 253 44-337 53-387 (388)
222 PRK02936 argD acetylornithine 99.6 4.6E-14 1E-18 134.8 18.5 235 53-336 69-375 (377)
223 TIGR03246 arg_catab_astC succi 99.6 5.8E-14 1.2E-18 135.1 19.0 236 53-335 75-390 (397)
224 PRK04073 rocD ornithine--oxo-a 99.6 1E-13 2.2E-18 133.3 20.5 235 53-336 80-393 (396)
225 PRK07505 hypothetical protein; 99.6 2.3E-13 5E-18 131.1 23.0 236 53-335 89-394 (402)
226 PRK05093 argD bifunctional N-s 99.6 9.8E-14 2.1E-18 133.8 19.7 237 53-335 80-395 (403)
227 PRK12381 bifunctional succinyl 99.6 7.5E-14 1.6E-18 134.7 18.7 237 53-335 79-394 (406)
228 TIGR03542 DAPAT_plant LL-diami 99.6 4.6E-13 1E-17 129.1 24.2 210 55-284 75-371 (402)
229 PLN02607 1-aminocyclopropane-1 99.6 3.8E-13 8.3E-18 131.1 23.7 222 72-335 122-436 (447)
230 TIGR01885 Orn_aminotrans ornit 99.6 2.4E-13 5.2E-18 131.0 21.9 237 53-336 77-398 (401)
231 PRK02627 acetylornithine amino 99.6 5.2E-14 1.1E-18 135.2 17.2 208 52-280 78-361 (396)
232 PRK03967 histidinol-phosphate 99.6 8.5E-14 1.8E-18 131.1 18.3 223 54-335 54-333 (337)
233 cd00615 Orn_deC_like Ornithine 99.6 5.5E-14 1.2E-18 129.9 15.9 167 54-222 58-293 (294)
234 PLN02231 alanine transaminase 99.6 1.2E-12 2.7E-17 130.0 26.4 172 55-228 172-441 (534)
235 TIGR03531 selenium_SpcS O-phos 99.6 2E-13 4.2E-18 131.8 19.2 166 55-224 105-344 (444)
236 TIGR01814 kynureninase kynuren 99.6 2.9E-13 6.2E-18 130.7 20.1 179 112-336 191-403 (406)
237 PF00464 SHMT: Serine hydroxym 99.6 9.8E-14 2.1E-18 131.4 15.7 206 53-280 60-359 (399)
238 COG0079 HisC Histidinol-phosph 99.6 3.7E-13 8E-18 127.0 19.4 242 49-335 51-353 (356)
239 PTZ00376 aspartate aminotransf 99.6 7.7E-13 1.7E-17 127.6 22.0 167 57-224 74-337 (404)
240 PLN02724 Molybdenum cofactor s 99.5 6.5E-13 1.4E-17 138.2 21.4 265 53-336 76-484 (805)
241 PTZ00125 ornithine aminotransf 99.5 1.2E-12 2.7E-17 125.9 20.8 234 54-336 72-395 (400)
242 KOG0257 Kynurenine aminotransf 99.5 4.6E-13 1E-17 124.1 15.7 176 47-224 63-326 (420)
243 PRK04366 glycine dehydrogenase 99.5 1.3E-12 2.8E-17 128.6 18.5 242 55-336 113-444 (481)
244 PLN02397 aspartate transaminas 99.5 5.1E-12 1.1E-16 122.6 21.8 113 112-224 217-355 (423)
245 PLN02624 ornithine-delta-amino 99.5 3.6E-12 7.8E-17 125.2 20.9 236 51-335 113-439 (474)
246 PRK09257 aromatic amino acid a 99.5 7.2E-12 1.6E-16 120.5 22.0 167 57-224 71-332 (396)
247 COG0075 Serine-pyruvate aminot 99.5 1.8E-11 4E-16 114.9 23.8 168 55-225 38-285 (383)
248 PRK08637 hypothetical protein; 99.5 1.1E-11 2.4E-16 118.9 23.0 220 72-337 71-387 (388)
249 PLN02672 methionine S-methyltr 99.5 1.1E-11 2.3E-16 129.9 24.3 169 55-224 734-989 (1082)
250 PLN02368 alanine transaminase 99.5 1.2E-11 2.6E-16 119.2 22.5 172 55-228 111-381 (407)
251 PF01212 Beta_elim_lyase: Beta 99.4 3.1E-13 6.8E-18 124.0 8.3 174 48-227 24-273 (290)
252 TIGR03372 putres_am_tran putre 99.4 2.1E-11 4.7E-16 118.4 21.2 242 53-336 115-440 (442)
253 cd01494 AAT_I Aspartate aminot 99.4 2.3E-12 5E-17 108.0 12.7 110 57-169 2-170 (170)
254 PRK00451 glycine dehydrogenase 99.4 1.1E-11 2.5E-16 121.0 19.3 237 57-337 114-445 (447)
255 PRK03080 phosphoserine aminotr 99.4 2.3E-11 5E-16 116.3 20.4 238 55-336 48-369 (378)
256 PF01276 OKR_DC_1: Orn/Lys/Arg 99.4 8E-12 1.7E-16 119.0 16.4 173 54-228 65-324 (417)
257 PRK09275 aspartate aminotransf 99.4 1.8E-11 3.8E-16 120.7 19.2 99 72-171 163-328 (527)
258 PRK08117 4-aminobutyrate amino 99.4 4.8E-11 1E-15 116.2 21.5 180 112-335 231-424 (433)
259 COG4992 ArgD Ornithine/acetylo 99.4 7.7E-12 1.7E-16 116.7 14.7 240 52-337 81-399 (404)
260 PRK03715 argD acetylornithine 99.4 3.1E-11 6.7E-16 116.0 19.2 176 112-336 203-389 (395)
261 PRK11522 putrescine--2-oxoglut 99.4 5.3E-11 1.2E-15 116.3 20.9 241 53-335 122-446 (459)
262 PRK04260 acetylornithine amino 99.4 4.6E-11 9.9E-16 114.2 20.1 230 55-336 66-373 (375)
263 PLN00144 acetylornithine trans 99.4 3.4E-11 7.4E-16 115.3 18.9 233 53-336 55-380 (382)
264 PRK08088 4-aminobutyrate amino 99.4 7.3E-11 1.6E-15 114.6 21.3 177 112-334 223-417 (425)
265 TIGR03801 asp_4_decarbox aspar 99.4 5.1E-11 1.1E-15 117.3 20.2 99 72-171 157-327 (521)
266 KOG1549 Cysteine desulfurase N 99.4 7.7E-12 1.7E-16 117.3 13.5 119 48-170 78-257 (428)
267 PRK05964 adenosylmethionine--8 99.4 5.3E-11 1.1E-15 115.6 19.5 178 112-336 224-418 (423)
268 COG4100 Cystathionine beta-lya 99.3 1.1E-11 2.4E-16 110.2 12.3 212 45-274 58-343 (416)
269 TIGR01364 serC_1 phosphoserine 99.3 6.3E-11 1.4E-15 112.0 18.4 238 55-336 37-344 (349)
270 PRK04612 argD acetylornithine 99.3 9.4E-11 2E-15 113.1 19.8 209 54-279 81-369 (408)
271 PLN02414 glycine dehydrogenase 99.3 4.4E-11 9.6E-16 124.8 18.6 243 56-336 569-903 (993)
272 KOG0259 Tyrosine aminotransfer 99.3 7.3E-10 1.6E-14 101.7 22.2 176 57-233 105-361 (447)
273 PRK05355 3-phosphoserine/phosp 99.3 1.2E-10 2.5E-15 110.7 17.9 234 55-336 48-354 (360)
274 TIGR00713 hemL glutamate-1-sem 99.3 1.9E-10 4.1E-15 111.7 19.2 164 53-221 86-333 (423)
275 cd00611 PSAT_like Phosphoserin 99.3 5.6E-11 1.2E-15 112.7 14.6 238 55-337 44-353 (355)
276 PRK02769 histidine decarboxyla 99.3 1.4E-09 3E-14 103.9 23.3 174 56-233 66-319 (380)
277 PLN02760 4-aminobutyrate:pyruv 99.3 3.3E-10 7.2E-15 111.8 19.6 148 112-278 284-457 (504)
278 PRK08593 4-aminobutyrate amino 99.3 6.7E-10 1.4E-14 108.4 21.5 174 112-335 231-424 (445)
279 PRK06173 adenosylmethionine--8 99.3 1.9E-10 4.1E-15 111.6 17.5 177 112-336 231-425 (429)
280 PRK07986 adenosylmethionine--8 99.3 2.3E-10 4.9E-15 111.0 17.8 149 112-280 229-391 (428)
281 PF03841 SelA: L-seryl-tRNA se 99.3 1E-11 2.3E-16 114.8 8.1 120 57-180 49-236 (367)
282 KOG1358 Serine palmitoyltransf 99.3 3.2E-11 6.9E-16 110.7 10.9 243 55-336 139-461 (467)
283 TIGR01366 serC_3 phosphoserine 99.3 3E-10 6.5E-15 107.9 18.1 241 55-336 41-356 (361)
284 TIGR00700 GABAtrnsam 4-aminobu 99.3 1.7E-09 3.7E-14 104.9 22.9 146 112-280 221-385 (420)
285 TIGR00508 bioA adenosylmethion 99.2 4.7E-10 1E-14 108.9 18.9 176 112-335 232-421 (427)
286 PRK06149 hypothetical protein; 99.2 8.4E-10 1.8E-14 117.2 22.3 146 112-280 768-935 (972)
287 PRK05367 glycine dehydrogenase 99.2 4.7E-10 1E-14 117.5 19.9 227 56-335 122-437 (954)
288 TIGR01788 Glu-decarb-GAD gluta 99.2 6.9E-10 1.5E-14 107.5 19.3 188 112-337 206-430 (431)
289 PRK00062 glutamate-1-semialdeh 99.2 3.7E-10 8.1E-15 109.7 17.4 204 53-280 88-393 (426)
290 PRK13360 omega amino acid--pyr 99.2 1.1E-09 2.4E-14 106.7 20.6 177 112-335 239-435 (442)
291 KOG0634 Aromatic amino acid am 99.2 1E-09 2.3E-14 102.2 19.1 223 72-328 126-455 (472)
292 PRK07678 aminotransferase; Val 99.2 2.5E-09 5.5E-14 104.5 22.8 180 112-334 237-443 (451)
293 PRK06777 4-aminobutyrate amino 99.2 9.4E-10 2E-14 106.7 19.4 146 112-280 222-386 (421)
294 PRK09264 diaminobutyrate--2-ox 99.2 8.2E-10 1.8E-14 107.2 18.2 180 112-334 222-410 (425)
295 PRK05630 adenosylmethionine--8 99.2 8.4E-10 1.8E-14 106.9 18.2 148 112-279 225-387 (422)
296 PRK08360 4-aminobutyrate amino 99.2 2.6E-09 5.6E-14 104.2 21.6 174 112-335 228-421 (443)
297 PRK05367 glycine dehydrogenase 99.2 5.2E-10 1.1E-14 117.3 17.7 244 56-337 543-872 (954)
298 PRK12403 putative aminotransfe 99.2 1.6E-09 3.4E-14 106.2 20.0 126 112-259 246-388 (460)
299 PRK07495 4-aminobutyrate amino 99.2 1.3E-09 2.8E-14 105.7 19.3 180 112-337 222-422 (425)
300 PRK06541 hypothetical protein; 99.2 1.6E-09 3.5E-14 106.0 19.9 180 112-335 245-450 (460)
301 PRK09792 4-aminobutyrate trans 99.2 1.6E-09 3.5E-14 105.1 19.7 180 112-335 222-416 (421)
302 PRK12566 glycine dehydrogenase 99.2 4E-10 8.6E-15 116.0 15.9 245 55-337 543-873 (954)
303 PRK09221 beta alanine--pyruvat 99.2 2.8E-09 6.1E-14 104.0 21.2 177 112-335 242-438 (445)
304 PRK06058 4-aminobutyrate amino 99.2 3E-09 6.5E-14 103.9 21.4 176 112-335 243-437 (443)
305 PLN02414 glycine dehydrogenase 99.2 2.3E-09 5.1E-14 112.1 21.5 228 56-336 149-465 (993)
306 PRK15029 arginine decarboxylas 99.2 9E-10 1.9E-14 112.3 17.1 169 55-225 205-465 (755)
307 PRK04013 argD acetylornithine/ 99.2 7.9E-10 1.7E-14 104.9 15.7 227 51-336 62-360 (364)
308 PLN02880 tyrosine decarboxylas 99.2 5.4E-09 1.2E-13 103.0 21.8 130 112-260 259-418 (490)
309 PRK06105 aminotransferase; Pro 99.2 3.2E-09 6.9E-14 104.0 20.0 178 112-336 242-449 (460)
310 PRK06918 4-aminobutyrate amino 99.2 3.8E-09 8.2E-14 103.4 20.4 146 112-280 243-408 (451)
311 COG1103 Archaea-specific pyrid 99.2 1.8E-09 3.9E-14 95.0 15.6 174 54-230 60-304 (382)
312 PLN03032 serine decarboxylase; 99.1 9.2E-09 2E-13 97.8 21.5 181 49-233 60-322 (374)
313 TIGR02407 ectoine_ectB diamino 99.1 4.7E-09 1E-13 101.5 19.5 178 112-336 218-408 (412)
314 COG0160 GabT 4-aminobutyrate a 99.1 7.1E-09 1.5E-13 99.5 19.8 180 112-336 246-445 (447)
315 PRK06082 4-aminobutyrate amino 99.1 6.5E-09 1.4E-13 101.8 19.9 193 50-260 108-390 (459)
316 TIGR00709 dat 2,4-diaminobutyr 99.1 1E-08 2.2E-13 100.1 20.8 175 112-335 230-430 (442)
317 PRK05639 4-aminobutyrate amino 99.1 9.2E-09 2E-13 100.6 20.2 175 112-335 246-438 (457)
318 KOG0256 1-aminocyclopropane-1- 99.1 4E-08 8.6E-13 91.2 21.9 163 59-224 125-378 (471)
319 PRK00615 glutamate-1-semialdeh 99.1 8E-09 1.7E-13 100.3 18.0 106 112-223 225-341 (433)
320 PLN02590 probable tyrosine dec 99.1 5.1E-08 1.1E-12 96.7 23.5 130 112-260 307-466 (539)
321 PRK05769 4-aminobutyrate amino 99.1 2E-08 4.4E-13 97.9 20.5 177 112-335 245-434 (441)
322 PRK05965 hypothetical protein; 99.0 1.3E-08 2.8E-13 99.7 18.5 179 112-336 239-447 (459)
323 PRK07046 aminotransferase; Val 99.0 2.7E-08 5.9E-13 97.2 20.2 165 54-223 114-363 (453)
324 PRK06062 hypothetical protein; 99.0 3.8E-08 8.2E-13 96.3 21.1 108 112-223 238-356 (451)
325 TIGR02617 tnaA_trp_ase tryptop 99.0 6.8E-09 1.5E-13 98.9 15.2 173 47-224 68-344 (467)
326 PRK12389 glutamate-1-semialdeh 99.0 3.4E-08 7.4E-13 96.0 19.4 107 112-223 224-340 (428)
327 TIGR03799 NOD_PanD_pyr putativ 99.0 4.7E-08 1E-12 96.9 20.5 120 112-233 285-428 (522)
328 COG0001 HemL Glutamate-1-semia 99.0 8.9E-09 1.9E-13 97.3 14.1 160 60-224 98-342 (432)
329 PRK07482 hypothetical protein; 99.0 7.1E-08 1.5E-12 94.6 21.1 146 112-279 244-419 (461)
330 PRK07481 hypothetical protein; 99.0 5.1E-08 1.1E-12 95.3 19.8 177 112-338 237-447 (449)
331 PRK06943 adenosylmethionine--8 99.0 4.8E-08 1E-12 95.6 19.5 148 112-278 246-412 (453)
332 PRK08297 L-lysine aminotransfe 99.0 1.2E-07 2.6E-12 92.5 22.2 175 112-335 249-436 (443)
333 PLN02482 glutamate-1-semialdeh 99.0 1.1E-08 2.3E-13 100.4 14.5 107 112-224 270-387 (474)
334 TIGR03251 LAT_fam L-lysine 6-t 99.0 1.1E-07 2.3E-12 92.6 21.1 176 112-336 242-430 (431)
335 PRK07036 hypothetical protein; 99.0 8.4E-08 1.8E-12 94.2 20.4 129 112-259 244-388 (466)
336 PRK06917 hypothetical protein; 99.0 1.9E-07 4E-12 91.3 22.7 146 112-279 224-396 (447)
337 PRK13578 ornithine decarboxyla 99.0 1.2E-08 2.7E-13 103.1 14.7 172 55-229 174-444 (720)
338 PRK06916 adenosylmethionine--8 98.9 3E-08 6.6E-13 97.1 16.8 180 112-338 248-457 (460)
339 COG1921 SelA Selenocysteine sy 98.9 7.7E-09 1.7E-13 96.7 11.8 152 48-203 58-269 (395)
340 PRK06148 hypothetical protein; 98.9 9.3E-08 2E-12 101.9 21.5 176 112-335 808-1005(1013)
341 TIGR01365 serC_2 phosphoserine 98.9 7.3E-08 1.6E-12 91.7 18.5 239 55-335 39-368 (374)
342 PRK07480 putative aminotransfe 98.9 5.8E-08 1.2E-12 95.1 18.1 129 112-259 243-384 (456)
343 TIGR00699 GABAtrns_euk 4-amino 98.9 5.3E-08 1.2E-12 95.1 17.1 173 112-336 275-462 (464)
344 PRK06938 diaminobutyrate--2-ox 98.9 1.9E-07 4.1E-12 91.6 19.0 124 112-259 255-390 (464)
345 KOG2467 Glycine/serine hydroxy 98.9 1.7E-07 3.7E-12 85.9 16.8 177 45-225 70-341 (477)
346 COG3977 Alanine-alpha-ketoisov 98.8 2.5E-07 5.4E-12 82.8 17.2 190 112-335 202-410 (417)
347 COG3844 Kynureninase [Amino ac 98.8 2.2E-07 4.8E-12 84.1 17.0 237 56-337 77-403 (407)
348 PRK06931 diaminobutyrate--2-ox 98.8 4E-07 8.7E-12 89.2 20.5 175 112-335 249-449 (459)
349 PRK07030 adenosylmethionine--8 98.8 4.1E-07 8.8E-12 89.3 20.3 129 112-259 239-382 (466)
350 TIGR00461 gcvP glycine dehydro 98.8 2.1E-07 4.6E-12 96.6 18.7 169 56-225 531-786 (939)
351 COG0161 BioA Adenosylmethionin 98.8 1.2E-07 2.7E-12 90.7 15.7 179 112-336 239-443 (449)
352 PLN02452 phosphoserine transam 98.8 3.2E-07 6.8E-12 87.2 17.0 235 55-336 52-359 (365)
353 PRK08742 adenosylmethionine--8 98.8 1.2E-06 2.6E-11 86.1 20.9 175 112-336 261-467 (472)
354 PRK06209 glutamate-1-semialdeh 98.7 3.7E-07 8.1E-12 88.8 16.4 106 112-223 207-328 (431)
355 PF00202 Aminotran_3: Aminotra 98.7 1.5E-07 3.2E-12 88.8 12.8 167 51-222 55-314 (339)
356 PRK15399 lysine decarboxylase 98.7 5.3E-07 1.1E-11 91.4 17.1 166 55-225 195-443 (713)
357 PRK07483 hypothetical protein; 98.7 1.5E-06 3.3E-11 84.9 19.8 183 112-336 224-437 (443)
358 PRK15400 lysine decarboxylase 98.7 1.6E-07 3.5E-12 95.1 13.3 168 55-226 195-444 (714)
359 PLN02263 serine decarboxylase 98.7 8.5E-06 1.8E-10 79.2 23.9 173 57-233 131-389 (470)
360 KOG1404 Alanine-glyoxylate ami 98.7 1.1E-06 2.4E-11 81.4 15.9 153 112-283 236-406 (442)
361 COG1982 LdcC Arginine/lysine/o 98.6 8.3E-07 1.8E-11 86.8 14.8 114 55-170 70-247 (557)
362 KOG2862 Alanine-glyoxylate ami 98.6 9.2E-06 2E-10 73.3 20.2 166 57-225 52-302 (385)
363 COG0076 GadB Glutamate decarbo 98.6 1.7E-06 3.7E-11 84.4 17.1 131 112-261 227-381 (460)
364 KOG1402 Ornithine aminotransfe 98.6 3.4E-06 7.4E-11 76.5 16.4 208 53-277 99-391 (427)
365 TIGR00461 gcvP glycine dehydro 98.5 4.7E-06 1E-10 86.9 17.3 233 56-335 110-426 (939)
366 PF00282 Pyridoxal_deC: Pyrido 98.5 4E-06 8.8E-11 80.0 15.4 120 112-233 214-363 (373)
367 KOG0633 Histidinol phosphate a 98.5 4.4E-06 9.6E-11 73.6 13.3 239 54-332 68-373 (375)
368 PRK12462 phosphoserine aminotr 98.4 3.2E-05 6.9E-10 73.2 19.0 237 55-335 49-357 (364)
369 PF02347 GDC-P: Glycine cleava 98.4 1.9E-05 4.1E-10 75.7 17.6 231 56-334 111-429 (429)
370 COG1448 TyrB Aspartate/tyrosin 98.4 4.3E-05 9.3E-10 71.1 18.1 167 57-224 71-332 (396)
371 PLN02974 adenosylmethionine-8- 98.2 2.5E-05 5.5E-10 81.1 14.5 89 112-204 609-709 (817)
372 PF04864 Alliinase_C: Allinase 98.2 0.00012 2.6E-09 67.4 16.8 233 55-319 43-346 (363)
373 KOG1401 Acetylornithine aminot 98.2 1.3E-05 2.9E-10 74.7 10.3 161 58-223 101-347 (433)
374 PF12897 Aminotran_MocR: Alani 98.0 0.0023 5E-08 60.0 20.7 236 55-328 69-404 (425)
375 TIGR03811 tyr_de_CO2_Ent tyros 98.0 0.0033 7.2E-08 63.5 23.4 110 112-224 298-475 (608)
376 COG0403 GcvP Glycine cleavage 97.9 0.0027 5.9E-08 60.1 19.6 110 58-170 123-291 (450)
377 PRK12566 glycine dehydrogenase 97.8 0.00075 1.6E-08 70.5 16.5 115 56-175 125-292 (954)
378 KOG0628 Aromatic-L-amino-acid/ 97.7 0.001 2.2E-08 63.3 14.5 144 112-275 255-428 (511)
379 KOG1403 Predicted alanine-glyo 97.4 0.003 6.5E-08 57.1 12.2 182 112-335 233-436 (452)
380 COG1003 GcvP Glycine cleavage 97.4 0.014 3.1E-07 55.5 16.8 122 55-177 109-293 (496)
381 COG3033 TnaA Tryptophanase [Am 97.4 0.028 6E-07 52.3 18.0 171 48-224 74-346 (471)
382 KOG1405 4-aminobutyrate aminot 97.4 0.0014 3.1E-08 60.4 9.6 147 112-283 295-451 (484)
383 KOG0258 Alanine aminotransfera 97.1 0.013 2.9E-07 54.9 13.1 181 47-229 109-387 (475)
384 COG1932 SerC Phosphoserine ami 97.1 0.018 3.8E-07 53.7 13.7 149 144-335 191-362 (365)
385 PLN02994 1-aminocyclopropane-1 97.0 0.0015 3.3E-08 54.2 6.0 53 53-105 94-153 (153)
386 PF05889 SLA_LP_auto_ag: Solub 96.7 0.018 3.9E-07 54.5 10.9 65 112-178 175-246 (389)
387 KOG1383 Glutamate decarboxylas 96.2 0.035 7.5E-07 53.3 9.4 182 112-336 238-446 (491)
388 KOG1412 Aspartate aminotransfe 95.8 0.19 4.1E-06 46.1 11.9 67 112-178 201-279 (410)
389 KOG1411 Aspartate aminotransfe 95.4 0.089 1.9E-06 48.8 8.6 107 74-180 124-301 (427)
390 KOG0629 Glutamate decarboxylas 95.0 0.066 1.4E-06 50.9 6.6 116 112-230 273-419 (510)
391 KOG2040 Glycine dehydrogenase 94.3 1 2.2E-05 45.4 13.0 58 112-169 700-762 (1001)
392 KOG2040 Glycine dehydrogenase 93.5 0.81 1.8E-05 46.0 10.9 93 61-153 169-308 (1001)
393 KOG3846 L-kynurenine hydrolase 83.8 2.5 5.5E-05 38.9 5.6 57 112-168 234-291 (465)
394 PF02571 CbiJ: Precorrin-6x re 73.4 8.3 0.00018 34.7 5.7 59 73-132 3-76 (249)
395 TIGR01470 cysG_Nterm siroheme 65.8 45 0.00098 28.9 8.5 31 71-101 10-40 (205)
396 PRK05562 precorrin-2 dehydroge 63.0 69 0.0015 28.3 9.1 60 71-130 26-119 (223)
397 PF01408 GFO_IDH_MocA: Oxidore 59.8 45 0.00097 25.5 6.9 65 60-128 54-119 (120)
398 KOG3843 Predicted serine hydro 59.4 3.4 7.5E-05 37.2 0.3 54 112-168 177-237 (432)
399 COG1648 CysG Siroheme synthase 58.8 89 0.0019 27.3 9.1 57 71-127 13-102 (210)
400 PRK08057 cobalt-precorrin-6x r 55.8 32 0.00069 30.9 5.9 60 73-132 5-75 (248)
401 TIGR00789 flhB_rel flhB C-term 53.8 12 0.00026 27.5 2.3 20 112-131 30-49 (82)
402 COG1737 RpiR Transcriptional r 52.7 60 0.0013 29.6 7.4 35 112-150 194-228 (281)
403 COG1377 FlhB Flagellar biosynt 52.4 8 0.00017 36.6 1.5 71 56-129 223-316 (363)
404 PRK04148 hypothetical protein; 49.7 68 0.0015 25.9 6.3 64 58-131 2-68 (134)
405 KOG2550 IMP dehydrogenase/GMP 47.8 23 0.00049 34.1 3.7 34 112-145 344-378 (503)
406 COG1606 ATP-utilizing enzymes 46.8 65 0.0014 29.0 6.2 22 112-133 103-124 (269)
407 PRK11557 putative DNA-binding 46.8 1E+02 0.0023 27.7 8.0 15 112-126 192-206 (278)
408 cd05013 SIS_RpiR RpiR-like pro 46.7 88 0.0019 24.2 6.7 16 112-127 77-92 (139)
409 PRK09108 type III secretion sy 45.9 11 0.00024 35.7 1.5 18 112-129 294-311 (353)
410 TIGR00715 precor6x_red precorr 45.2 54 0.0012 29.6 5.7 21 112-132 55-75 (256)
411 PRK13109 flhB flagellar biosyn 44.9 12 0.00026 35.6 1.4 18 112-129 301-318 (358)
412 PRK12721 secretion system appa 44.7 12 0.00026 35.5 1.4 18 112-129 292-309 (349)
413 COG0352 ThiE Thiamine monophos 44.5 66 0.0014 28.2 5.9 47 85-131 26-74 (211)
414 PRK06298 type III secretion sy 44.3 12 0.00027 35.4 1.5 18 112-129 293-310 (356)
415 COG2099 CobK Precorrin-6x redu 44.3 71 0.0015 28.7 6.1 58 74-131 5-75 (257)
416 PF13241 NAD_binding_7: Putati 42.4 1.2E+02 0.0026 22.8 6.6 58 70-127 7-90 (103)
417 PF07905 PucR: Purine cataboli 42.1 53 0.0011 25.8 4.6 16 112-127 89-104 (123)
418 PRK12468 flhB flagellar biosyn 42.0 14 0.00031 35.5 1.5 17 112-128 299-315 (386)
419 TIGR00328 flhB flagellar biosy 41.9 14 0.0003 35.0 1.4 19 112-130 292-310 (347)
420 COG2257 Uncharacterized homolo 41.3 18 0.00038 26.9 1.6 19 112-130 35-53 (92)
421 TIGR01404 FlhB_rel_III type II 40.6 14 0.00031 34.8 1.3 18 112-129 291-308 (342)
422 PF03192 DUF257: Pyrococcus pr 40.6 26 0.00056 30.6 2.8 47 88-135 6-52 (210)
423 PRK08156 type III secretion sy 38.8 15 0.00033 34.9 1.1 18 112-129 287-304 (361)
424 cd04795 SIS SIS domain. SIS (S 38.7 1.4E+02 0.003 21.0 7.1 69 55-127 11-79 (87)
425 PRK06718 precorrin-2 dehydroge 37.3 2.6E+02 0.0057 24.0 8.6 32 71-102 11-42 (202)
426 TIGR03855 NAD_NadX aspartate d 36.5 1.7E+02 0.0037 25.9 7.4 57 71-128 38-95 (229)
427 PRK05702 flhB flagellar biosyn 36.5 19 0.00041 34.2 1.4 19 112-130 299-317 (359)
428 PLN02522 ATP citrate (pro-S)-l 36.4 2E+02 0.0042 29.6 8.6 87 43-132 50-140 (608)
429 PF02639 DUF188: Uncharacteriz 36.2 97 0.0021 24.8 5.3 46 72-128 30-76 (130)
430 PRK12772 bifunctional flagella 35.6 20 0.00044 36.7 1.5 19 112-130 555-573 (609)
431 cd05005 SIS_PHI Hexulose-6-pho 34.9 2.6E+02 0.0056 23.2 8.1 27 58-84 21-47 (179)
432 PRK15482 transcriptional regul 33.9 1.8E+02 0.0039 26.3 7.5 26 58-83 123-148 (285)
433 PRK10637 cysG siroheme synthas 33.6 2.4E+02 0.0052 27.8 8.6 61 70-130 12-106 (457)
434 PRK13936 phosphoheptose isomer 33.5 3E+02 0.0066 23.4 8.6 15 112-126 128-142 (197)
435 COG0074 SucD Succinyl-CoA synt 33.5 2.7E+02 0.0059 25.6 8.1 75 53-131 50-125 (293)
436 PRK11337 DNA-binding transcrip 32.9 2.3E+02 0.0049 25.7 8.0 34 112-149 204-237 (292)
437 COG0673 MviM Predicted dehydro 32.8 1.7E+02 0.0036 27.0 7.2 54 76-132 75-128 (342)
438 PF07085 DRTGG: DRTGG domain; 31.9 32 0.00069 26.1 1.8 16 112-127 75-90 (105)
439 COG0603 Predicted PP-loop supe 31.5 1.2E+02 0.0026 26.8 5.4 56 71-126 4-59 (222)
440 PRK12773 flhB flagellar biosyn 31.5 23 0.0005 35.9 1.1 18 112-129 591-608 (646)
441 PRK11579 putative oxidoreducta 31.5 1.4E+02 0.0031 27.9 6.5 70 58-131 54-124 (346)
442 PRK15418 transcriptional regul 31.2 1.4E+02 0.003 27.9 6.2 43 56-98 69-121 (318)
443 PRK10886 DnaA initiator-associ 31.2 3.4E+02 0.0074 23.3 8.6 16 68-83 39-54 (196)
444 PRK06091 membrane protein FdrA 30.9 2.3E+02 0.0049 28.7 7.8 73 55-130 103-175 (555)
445 PRK00124 hypothetical protein; 30.0 1.4E+02 0.0031 24.6 5.3 43 73-126 47-90 (151)
446 PRK06719 precorrin-2 dehydroge 29.3 3.2E+02 0.007 22.4 8.0 31 71-101 14-44 (157)
447 COG2121 Uncharacterized protei 29.2 66 0.0014 28.0 3.4 71 59-130 81-154 (214)
448 cd00449 PLPDE_IV PyridoxaL 5'- 29.1 59 0.0013 28.9 3.3 66 63-130 140-209 (256)
449 PRK10206 putative oxidoreducta 29.0 2.4E+02 0.0052 26.4 7.6 67 58-129 54-122 (344)
450 PRK11106 queuosine biosynthesi 29.0 1.3E+02 0.0028 26.7 5.4 59 72-130 4-64 (231)
451 COG1105 FruK Fructose-1-phosph 28.4 1.4E+02 0.003 27.9 5.5 43 88-131 125-168 (310)
452 TIGR03127 RuMP_HxlB 6-phospho 28.3 2E+02 0.0044 23.8 6.3 67 58-127 18-104 (179)
453 PRK00414 gmhA phosphoheptose i 28.2 2.9E+02 0.0064 23.5 7.4 15 69-83 43-57 (192)
454 TIGR00268 conserved hypothetic 27.7 2.4E+02 0.0053 25.1 7.1 68 58-127 3-70 (252)
455 TIGR01121 D_amino_aminoT D-ami 27.1 71 0.0015 28.9 3.5 70 61-130 154-224 (276)
456 TIGR03586 PseI pseudaminic aci 26.8 1.2E+02 0.0025 28.6 4.9 105 71-181 134-251 (327)
457 PF07021 MetW: Methionine bios 26.6 3E+02 0.0065 23.7 6.9 72 58-129 62-166 (193)
458 PRK02947 hypothetical protein; 26.5 4E+02 0.0087 23.7 8.2 41 112-152 123-170 (246)
459 smart00642 Aamy Alpha-amylase 26.4 65 0.0014 26.9 2.9 20 112-131 73-92 (166)
460 cd05006 SIS_GmhA Phosphoheptos 25.4 3.9E+02 0.0084 22.1 8.4 14 70-83 33-46 (177)
461 COG3414 SgaB Phosphotransferas 25.3 2.5E+02 0.0055 21.0 5.6 51 105-157 13-65 (93)
462 PF00128 Alpha-amylase: Alpha 25.2 67 0.0014 28.9 3.0 30 100-131 45-74 (316)
463 PRK11302 DNA-binding transcrip 24.9 3.5E+02 0.0075 24.3 7.7 26 58-83 116-141 (284)
464 PRK13938 phosphoheptose isomer 24.6 4.5E+02 0.0097 22.5 9.0 18 67-84 42-59 (196)
465 TIGR01123 ilvE_II branched-cha 23.6 80 0.0017 29.2 3.2 73 58-130 159-240 (313)
466 COG2390 DeoR Transcriptional r 23.4 1.9E+02 0.0042 27.1 5.6 45 55-99 65-121 (321)
467 PF06508 QueC: Queuosine biosy 23.3 88 0.0019 27.2 3.2 57 72-128 2-60 (209)
468 PRK12400 D-amino acid aminotra 22.5 70 0.0015 29.2 2.6 68 63-130 163-231 (290)
469 PRK13352 thiamine biosynthesis 22.2 2.8E+02 0.0061 26.9 6.4 25 112-136 209-233 (431)
470 TIGR01761 thiaz-red thiazoliny 20.8 3.1E+02 0.0068 25.9 6.6 39 86-128 83-121 (343)
471 PF01269 Fibrillarin: Fibrilla 20.3 3.1E+02 0.0068 24.3 5.9 75 51-131 49-133 (229)
472 PRK06092 4-amino-4-deoxychoris 20.3 83 0.0018 28.3 2.5 66 63-129 152-220 (268)
473 TIGR03461 pabC_Proteo aminodeo 20.1 80 0.0017 28.2 2.4 70 59-130 146-219 (261)
474 KOG1197 Predicted quinone oxid 20.0 3.2E+02 0.007 25.0 6.0 61 90-151 144-223 (336)
No 1
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-70 Score=510.59 Aligned_cols=332 Identities=51% Similarity=0.837 Sum_probs=311.3
Q ss_pred CCCccceeeccCCCC-CCCCCccccccccceeeCCCCCC--------CCCCcccCCCCchHHHHHHHHHhHhCCCeEEEc
Q 019543 6 EPGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (339)
Q Consensus 6 ~~~~~~~~~~~~~~~-~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~ 76 (339)
.+.++|+++|.+... +.++++.+|||++|||.+++.++ ..+|.|+|.+||+++.||+.+++++|++++++|
T Consensus 5 ~~~~~T~~v~~g~~~~~~~gav~~PI~~tStf~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~lE~~~a~LEg~~~~~af 84 (396)
T COG0626 5 KLSLTTRLVHAGRRPDDLTGAVNPPIYLTSTFVFDSAGEGLDAFAGEEGGYDYSRTGNPTRDALEEALAELEGGEDAFAF 84 (396)
T ss_pred ccccceeeEEcccccccCCCcccCCeeeeeeecccChhhhhhhccccccCcccccCCCccHHHHHHHHHHhhCCCcEEEe
Confidence 467789999999765 56899999999999999987753 467999999999999999999999999999999
Q ss_pred CcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH--------------------------------------------
Q 019543 77 TSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS-------------------------------------------- 111 (339)
Q Consensus 77 ~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------------------------------- 111 (339)
+|||+|+.+ ++.++++||+|++++..|+++++++.
T Consensus 85 sSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~ 164 (396)
T COG0626 85 SSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLLE 164 (396)
T ss_pred cCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCcccc
Confidence 999999985 77799999999999999999987665
Q ss_pred ----HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH-hcCC
Q 019543 112 ----RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEGS 186 (339)
Q Consensus 112 ----~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~-~~~~ 186 (339)
++|+++||++|+.+|||+|+++|++++|+++|+||+++|+||+++||++++||+++++++.+.+.+....+ .+|.
T Consensus 165 v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~ 244 (396)
T COG0626 165 VPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGA 244 (396)
T ss_pred cccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999888887777777755554 6899
Q ss_pred CCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHH
Q 019543 187 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSK 266 (339)
Q Consensus 187 ~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~ 266 (339)
.++|+++|+++++|+++..|++++++|++.+++||+++|.|+.|+||++++||+|++++|+++|.|+++||++.+.+++.
T Consensus 245 ~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~ 324 (396)
T COG0626 245 VLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAK 324 (396)
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999889999999996546789
Q ss_pred HHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 267 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 267 ~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+|++.|+.+.+++|||+.+|++++|+.++|..++++.|++.|+.+++||+|||+||.+|||+||.+||+++
T Consensus 325 ~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 325 KFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGLEDVEDLIADLEQALAKA 395 (396)
T ss_pred HHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999874
No 2
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=1.9e-67 Score=498.55 Aligned_cols=326 Identities=49% Similarity=0.790 Sum_probs=286.6
Q ss_pred cceeeccCCCCC--CCCCccccccccceeeCCCCC-------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHH
Q 019543 10 STLLMNFSNEFD--PYGALSTPLYQTATFKQPSAT-------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGM 80 (339)
Q Consensus 10 ~~~~~~~~~~~~--~~~~~~~pi~~~~~~~~~~~~-------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~ 80 (339)
+|+++|++...+ .++++.||||+||||.|++.+ ...+|.|+|.+||+++.||++|++++|++++++|+|||
T Consensus 1 ~T~~vh~g~~~~~~~~~~v~~pi~~sstf~~~~~~~~~~~~~~~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~SGm 80 (386)
T PF01053_consen 1 ETLLVHAGRDPDEDQTGAVNPPIYQSSTFVFDSAEELDAFAGEEKGYIYSRYGNPTVRALEQRLAALEGGEDALLFSSGM 80 (386)
T ss_dssp HHHHHHTTTTGGTSTTTBSS--B---SBBBBSSHHHHHHHTTSSSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEESSHH
T ss_pred CcceEeCCCCCCCCCCCCeeCCccccccCcccchHHHHhhcCCCCCcceeccccccHHHHHHHHHHhhcccceeeccchH
Confidence 588999998754 689999999999999998543 35679999999999999999999999999999999999
Q ss_pred HHHH-HHHHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------H
Q 019543 81 AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------R 112 (339)
Q Consensus 81 ~A~~-~il~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~ 112 (339)
+|+. ++++++++||+|++++..|+++..+++ +
T Consensus 81 aAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~ 160 (386)
T PF01053_consen 81 AAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRPNTKLVFLESPSNPTLEVPDLE 160 (386)
T ss_dssp HHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCTTEEEEEEESSBTTTTB---HH
T ss_pred HHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhccccceEEEEEcCCCcccccccHH
Confidence 9997 567799999999999999999987765 9
Q ss_pred HHHHHHHHcC-CEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcC-hhHHHHHHHHHHhcCCCCCh
Q 019543 113 KIAEMAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKG-ERLAKELYFLQNAEGSGLAP 190 (339)
Q Consensus 113 ~I~~la~~~g-~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~-~~l~~~l~~~~~~~~~~~~~ 190 (339)
+|+++||++| ++++||+|++++++.+|+.+|+||+++|++|+++||++++||++++++ +++.++++..++.+|..++|
T Consensus 161 ~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p 240 (386)
T PF01053_consen 161 AIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSP 240 (386)
T ss_dssp HHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--H
T ss_pred HHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchH
Confidence 9999999999 999999999999999999999999999999999999999999999987 57888888888889999999
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHH-HHHHHH
Q 019543 191 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA-LSKHVV 269 (339)
Q Consensus 191 ~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~-~~~~~~ 269 (339)
.++++++++|+++..|++++.+|+++++++|+++|.|+.|+||++++||+|++++++++|.|++++|++++.. ++.+|+
T Consensus 241 ~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~ 320 (386)
T PF01053_consen 241 FDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFL 320 (386)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHH
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997774 899999
Q ss_pred ccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 270 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 270 ~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
++|+.+.+++|||+.+|++++|+.++|+.+++++++..|+++++||+|||+||++|||+||.+||+
T Consensus 321 ~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 321 DALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLEDPDDLIADLEQALE 386 (386)
T ss_dssp HH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHHH
T ss_pred hhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEeccCCHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999996
No 3
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-67 Score=472.44 Aligned_cols=333 Identities=41% Similarity=0.670 Sum_probs=304.5
Q ss_pred CCCCccceeeccCCCCCCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEc
Q 019543 5 EEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (339)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~ 76 (339)
..|.|+|+++|+++.+...++...|||++++|.|++.+ +..+|.|+|..||+.+.||+++|.++|+-.++.+
T Consensus 4 ~~~~f~T~~vHag~~d~~t~ara~PIyqtTsy~F~d~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~ 83 (426)
T COG2873 4 ANWGFETLAVHAGQEDPTTGARAVPIYQTTSYVFDDTDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAV 83 (426)
T ss_pred cccCcchhhhcCCCCCCCCCceecceeeeeeeecCCHHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcchhhhhh
Confidence 46889999999998844589999999999999999876 3568999999999999999999999999999999
Q ss_pred CcHHHHHH-HHHHhcCCCCEEEEcCCCccchHHHHH--------------------------------------------
Q 019543 77 TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLS-------------------------------------------- 111 (339)
Q Consensus 77 ~sG~~A~~-~il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------------------------------- 111 (339)
+|||+|+. +++.++++||+|+.++.+|+|+..++.
T Consensus 84 aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~nTkavf~EtigNP~~~v 163 (426)
T COG2873 84 ASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDENTKAVFAETIGNPGLDV 163 (426)
T ss_pred ccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCcccceEEEEeccCCCccc
Confidence 99999997 678899999999999999999998765
Q ss_pred ---HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcCh-h---------------
Q 019543 112 ---RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-R--------------- 172 (339)
Q Consensus 112 ---~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~-~--------------- 172 (339)
++|.++||+||+++|||++.+++++.+|++.|+||+++|+||++||||..+||+|+-... +
T Consensus 164 ~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p 243 (426)
T COG2873 164 LDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDP 243 (426)
T ss_pred cCHHHHHHHHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCc
Confidence 999999999999999999999999999999999999999999999999999999975321 0
Q ss_pred ------HHH---------HHH-HHHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCC
Q 019543 173 ------LAK---------ELY-FLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 236 (339)
Q Consensus 173 ------l~~---------~l~-~~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~ 236 (339)
+.+ ++| ...+.+|.+++|+.+++.+.+|+++..|++|+.+|+.++++||++||.|..|+||+++
T Consensus 244 ~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~ 323 (426)
T COG2873 244 SYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLA 323 (426)
T ss_pred cccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCC
Confidence 011 111 1224579999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHhHhhhc-CCCcceEEEee-CCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeE
Q 019543 237 EHPGHELHYSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 314 (339)
Q Consensus 237 ~~~~~~~~~~~~-~~~~~ivs~~~-~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~l 314 (339)
+||+|++++++. +|.|++++|.+ ++.+...+|+++|+.+....+.|+..|+++||++++|..++++++.++|+.+++|
T Consensus 324 ~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~I 403 (426)
T COG2873 324 SHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLI 403 (426)
T ss_pred CCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcE
Confidence 999999999885 78999999998 4558889999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCCHHHHHHHHHHHHhcC
Q 019543 315 RISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 315 Risvg~e~~~~li~~l~~al~~~ 337 (339)
|+|||+||.+|||+||.|||++.
T Consensus 404 RlSVGIEd~~DiiaDl~qAl~~~ 426 (426)
T COG2873 404 RLSVGIEDIDDIIADLEQALEAA 426 (426)
T ss_pred EEEeccCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999863
No 4
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.4e-64 Score=479.76 Aligned_cols=331 Identities=41% Similarity=0.660 Sum_probs=306.1
Q ss_pred CCccceeeccCCCCC-CCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH
Q 019543 7 PGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA 85 (339)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~ 85 (339)
.+++|+++|.+...+ .++++.+|||+|+||.|++..+..+|.|+|.++|+++.||++||+++|++.+++++||++|+.+
T Consensus 4 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~Y~R~~npt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~ 83 (388)
T PRK08861 4 RKPATIAVRTGIESDSQYHAVVPPIYLSTNYGFPAFGEVPKYDYTRSGNPNRGLLEQTLSELESGKGAVVTNCGTSALNL 83 (388)
T ss_pred CCcccceeECCCCCCCCCCCccCCcccCcceEeCCcCccCCccccCCCCchHHHHHHHHHHHhCCCeEEEECCHHHHHHH
Confidence 367899999986543 4799999999999999988765567999999999999999999999999999999999999986
Q ss_pred H-HHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHHHH
Q 019543 86 V-THLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIAEM 117 (339)
Q Consensus 86 i-l~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~l 117 (339)
+ .+++++||+|+++++.|+++..++. ++|.++
T Consensus 84 ~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~l 163 (388)
T PRK08861 84 WVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQK 163 (388)
T ss_pred HHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHH
Confidence 4 4588999999999999987654321 899999
Q ss_pred HHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHH
Q 019543 118 AHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 197 (339)
Q Consensus 118 a~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~ 197 (339)
|+++|+++|+|++|+.++..+++..|+|++++|++|+++||++.+||+++++++++.++++.++..+|..++|+++|+++
T Consensus 164 a~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~ 243 (388)
T PRK08861 164 AKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTL 243 (388)
T ss_pred HHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHH
Confidence 99999999999999999888888889999999999999999999999998877778888888888889999999999999
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-CHHHHHHHHccCCcce
Q 019543 198 RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFS 276 (339)
Q Consensus 198 ~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-~~~~~~~~~~~L~~~~ 276 (339)
++|+++..|++++.+|+..++++|+++|.|..|+||++++||+|+++++++.|.|++++|.++ +.+.+.+|+++|+.+.
T Consensus 244 rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~l~~ 323 (388)
T PRK08861 244 RGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALALFS 323 (388)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCCcce
Confidence 999999999999999999999999999999999999999999999999999999999999994 5777899999999999
Q ss_pred eecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 277 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 277 i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+++|||+.+|++.+|+.++|+.+++++++..|+++++||+|||+||.||||+||.+||+++
T Consensus 324 ~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE~~~dli~Dl~~al~~~ 384 (388)
T PRK08861 324 LAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLEDAQDLIADLDQAFAKA 384 (388)
T ss_pred EccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999864
No 5
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=1.2e-63 Score=482.62 Aligned_cols=337 Identities=86% Similarity=1.305 Sum_probs=310.7
Q ss_pred CCCCCCccceeeccCCCCCCCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHH
Q 019543 3 VEEEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAA 82 (339)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A 82 (339)
..|+++++|+++|.+...+.++++.+|||+++||.+++..+...|.|+|.++|++++||+++|+++|++.+++|+||++|
T Consensus 81 ~~~~~~~~t~~~~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~Y~r~gnpt~~aLE~~lA~leg~e~ai~~~SG~aA 160 (464)
T PLN02509 81 IKEEASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAA 160 (464)
T ss_pred cccCCCcchHheeCCCCCCCCCCccCCccccceecCccccccCCCccCCCCCHHHHHHHHHHHHHhCCCEEEEeCcHHHH
Confidence 34689999999999865556789999999999999877655567999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHH
Q 019543 83 LAAVTHLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIA 115 (339)
Q Consensus 83 ~~~il~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~ 115 (339)
+.+++.++++||+|+++++.|+++..++. ++|+
T Consensus 161 i~~il~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~ 240 (464)
T PLN02509 161 LSAVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIA 240 (464)
T ss_pred HHHHHHHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHH
Confidence 87777789999999999999998753321 9999
Q ss_pred HHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHH
Q 019543 116 EMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 195 (339)
Q Consensus 116 ~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~ 195 (339)
++|++||++||+|+||+.++.++++..++|++++|++|+++|+++.+||+++++++.+.+.++.++...+..++|.++++
T Consensus 241 ~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l 320 (464)
T PLN02509 241 EMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWL 320 (464)
T ss_pred HHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHH
Confidence 99999999999999999998888888899999999999999999989999998776677777766666788899999999
Q ss_pred HHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcc
Q 019543 196 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF 275 (339)
Q Consensus 196 ~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~ 275 (339)
++++|++++.|++++++|+++++++|+++|.|+.|+||++++||+|++++++++|.|++++|.+++.+.+.+|+++|+.+
T Consensus 321 ~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~ 400 (464)
T PLN02509 321 CLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYF 400 (464)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888889999999999
Q ss_pred eeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcCCC
Q 019543 276 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGPL 339 (339)
Q Consensus 276 ~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~~~ 339 (339)
.+++|||+.+|++++|+.++|+.+++++++..||++++||+|||+||++|||+||.+||++.|+
T Consensus 401 ~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGlE~~~DLi~Dl~~Al~~~~~ 464 (464)
T PLN02509 401 SIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFRTGPL 464 (464)
T ss_pred eEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHcccCC
Confidence 9999999999999999999999999999999999999999999999999999999999998874
No 6
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=4e-62 Score=465.61 Aligned_cols=330 Identities=42% Similarity=0.626 Sum_probs=302.2
Q ss_pred CccceeeccCCCCCCCCCccccccccceeeCCCCC----CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHH
Q 019543 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT----ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAAL 83 (339)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~----~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~ 83 (339)
+.+|+++|.+...+.++++.+|||+|+||.+++.. +..+|.|+|.++|++++||+++|+++|++++++|+||++|+
T Consensus 2 ~~~t~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~y~r~~np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai 81 (385)
T PRK08574 2 RRGTDAVRGYRGSDPYGSLQPPIYLTALFRQEGEAYPSDRGFDLKYSREENPTLRPLEEALAKLEGGVDALAFNSGMAAI 81 (385)
T ss_pred CccceeeecCCCCCCCCCccCCccCCcceecCcchhhcCCcCCceEECCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHH
Confidence 46799999875555689999999999999887642 23468999999999999999999999999999999999999
Q ss_pred HH-HHHhcCCCCEEEEcCCCccchHHHHH----------------------------------------------HHHHH
Q 019543 84 AA-VTHLLGTGEEIVAGDDLYGGTDRLLS----------------------------------------------RKIAE 116 (339)
Q Consensus 84 ~~-il~ll~~GD~Vi~~~~~y~~~~~~~~----------------------------------------------~~I~~ 116 (339)
.. +.++++|||+|+++++.|+++...++ ++|++
T Consensus 82 ~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~ 161 (385)
T PRK08574 82 STLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAK 161 (385)
T ss_pred HHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHH
Confidence 85 45689999999999999987654331 99999
Q ss_pred HHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHH
Q 019543 117 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 196 (339)
Q Consensus 117 la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~ 196 (339)
+|+++|++||+|++|++|...+++..|+|++++|++|+++||++++||+++++++++.++++.+++.+|..++|++++++
T Consensus 162 la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~ 241 (385)
T PRK08574 162 AAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLV 241 (385)
T ss_pred HHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 99999999999999999987788888999999999999999999899987777778888888888888999999999999
Q ss_pred HhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcC--CCcceEEEee-CCHHHHHHHHccCC
Q 019543 197 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK--GAGSVLSFLT-GSLALSKHVVETTK 273 (339)
Q Consensus 197 ~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~--~~~~ivs~~~-~~~~~~~~~~~~L~ 273 (339)
+++|+++..|++++.+|+.+++++|+++|.|+.|+||++++||+|++++++++ |+|++++|++ ++.+.+.+|+++|+
T Consensus 242 l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~l~ 321 (385)
T PRK08574 242 LRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAVLKFLRSLK 321 (385)
T ss_pred HcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999985 6899999999 56788899999999
Q ss_pred cceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 274 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 274 ~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
.+.+++|||+.+|++++|+.++|+.+++++++..|+++++||||||+||++|||+||.+||+++
T Consensus 322 l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~ 385 (385)
T PRK08574 322 LIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGLEDVEDLIEDLDQALGSI 385 (385)
T ss_pred cceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999864
No 7
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.7e-62 Score=470.64 Aligned_cols=332 Identities=33% Similarity=0.536 Sum_probs=298.8
Q ss_pred CCCCccceeeccCCCCCCCCCccccccccceeeCCCCCC--------CCCCcccCCCCchHHHHHHHHHhHhCCCeEEEc
Q 019543 5 EEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (339)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~ 76 (339)
|..+++|+++|.+...+.++++.+|||+||||.|++.++ ..+|.|+|.+||++++||+.+|+++|++++++|
T Consensus 3 ~~~~~~t~~~~~g~~~~~~~~~~~PI~~sst~~f~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~leg~~~av~~ 82 (432)
T PRK06702 3 ESWGKGTICVQGGYTPKNGEPRVLPLYQSTTYKYDTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELEGGVGAVAT 82 (432)
T ss_pred CCCCcchHheeCCCCCCCCCCccCCccCCcceecCCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHhCCCcEEEE
Confidence 456788999999854444789999999999999987642 346889999999999999999999999999999
Q ss_pred CcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH--------------------------------------------
Q 019543 77 TSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS-------------------------------------------- 111 (339)
Q Consensus 77 ~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------------------------------- 111 (339)
+|||+|+.+ ++++++|||+||+++++|+++..++.
T Consensus 83 ~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~ 162 (432)
T PRK06702 83 ASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALANDKTKLVYAESLGNPAMN 162 (432)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCcCCeEEEEEcCCCcccc
Confidence 999999985 55689999999999999998876532
Q ss_pred ----HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcCh---------hHH----
Q 019543 112 ----RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE---------RLA---- 174 (339)
Q Consensus 112 ----~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~---------~l~---- 174 (339)
++|+++|++||+++|+|++++++.+.+|++.|+||+++|+|||++||++.+||+++.... .+.
T Consensus 163 v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~ 242 (432)
T PRK06702 163 VLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDP 242 (432)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999874321 111
Q ss_pred -----------------HHHH-HHHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCC
Q 019543 175 -----------------KELY-FLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 236 (339)
Q Consensus 175 -----------------~~l~-~~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~ 236 (339)
.+.+ ...+.+|..++|+++++++++|++++.|++++++|+.+++++|+++|.|+.|+||+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~ 322 (432)
T PRK06702 243 SYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLD 322 (432)
T ss_pred cccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC
Confidence 1112 2344678999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHhHhhhc-CCCcceEEEee-CCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeE
Q 019543 237 EHPGHELHYSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 314 (339)
Q Consensus 237 ~~~~~~~~~~~~-~~~~~ivs~~~-~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~l 314 (339)
++|+|+++++++ .|.|++++|.+ ++.+.+.+|+++|+.+.+++|||+.+|++.||+.++|+.+++++++..|+++++|
T Consensus 323 ~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~li 402 (432)
T PRK06702 323 SNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLI 402 (432)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeE
Confidence 999999999999 78999999998 5677789999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCCHHHHHHHHHHHHhc
Q 019543 315 RISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 315 Risvg~e~~~~li~~l~~al~~ 336 (339)
|||||+||+||||+||.+||+-
T Consensus 403 RlSvGlEd~eDLi~Dl~~Al~~ 424 (432)
T PRK06702 403 RLSVGIEDVSDIIADLEAALVG 424 (432)
T ss_pred EEEeccCCHHHHHHHHHHHHhc
Confidence 9999999999999999999974
No 8
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.7e-62 Score=462.56 Aligned_cols=326 Identities=26% Similarity=0.435 Sum_probs=290.4
Q ss_pred CCccceeeccCCCCCC-CCCccccccccceeeCCCCC--------C-CCCCcccCCCCchHHHHHHHHHhHhCCCeEEEc
Q 019543 7 PGVSTLLMNFSNEFDP-YGALSTPLYQTATFKQPSAT--------E-NGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (339)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~~~~~~pi~~~~~~~~~~~~--------~-~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~ 76 (339)
.+++|+++|.+...+. ++++.||||+|+||.|++.+ . ..+|.|+|.+||+++.||+++|+++|++.+++|
T Consensus 4 ~~~~t~~~~~~~~~~~~~~~v~~pi~~sstf~f~~~~~~~~~~~~~~~~~~~YsR~~nPt~~~le~~la~LEg~~~a~~~ 83 (395)
T PRK08114 4 KKLDTQLVNAGRSKKYTQGSVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQEAMCELEGGAGCALY 83 (395)
T ss_pred CCcchheEeCCCCCCCCCCCccCCeeCCCceecCCHHHHHHhhccCcCCCccccCCCChhHHHHHHHHHHHhCCCeEEEE
Confidence 4577999999854443 48999999999999998754 1 135999999999999999999999999999999
Q ss_pred CcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH--------------------------------------------
Q 019543 77 TSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS-------------------------------------------- 111 (339)
Q Consensus 77 ~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------------------------------- 111 (339)
+|||+|+.+ +++++++||+|++++..|+++..+++
T Consensus 84 ~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l~~~l~~~TrlV~~EtpsNp~~~v 163 (395)
T PRK08114 84 PCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADIAKLIQPNTKVVFLESPGSITMEV 163 (395)
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCEe
Confidence 999999985 56689999999999999998886653
Q ss_pred ---HHHHHHHHHcC--CEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCC
Q 019543 112 ---RKIAEMAHAHG--ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 186 (339)
Q Consensus 112 ---~~I~~la~~~g--~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~ 186 (339)
++|+++||++| ++++||+++++|+..+++++|+||+++|.+||++||+++++|+++.++ +..+.++..+...|.
T Consensus 164 ~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~-~~~~~l~~~~~~~G~ 242 (395)
T PRK08114 164 HDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANA-RCWEQLRENSYLMGQ 242 (395)
T ss_pred ecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCH-HHHHHHHHHHHhccC
Confidence 99999999985 999999999999999999999999999999999999999999887664 566777777778899
Q ss_pred CCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC---HH
Q 019543 187 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LA 263 (339)
Q Consensus 187 ~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~---~~ 263 (339)
.++|+++|+++++|+++..|++++.+|+..+++||+++|.|+.|+||++++||+|+++++++.+.|++++|.+++ .+
T Consensus 243 ~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~ 322 (395)
T PRK08114 243 MVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDE 322 (395)
T ss_pred CCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999853 67
Q ss_pred HHHHHHccCCcceeecccCCccccee--ccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 264 LSKHVVETTKYFSITVSFGSVKSLIS--MPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 264 ~~~~~~~~L~~~~i~v~~G~~~s~~~--~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
++.+|+++|+.+.+++|||+.+|++. +|..+.|.. +.+ ..|+.+++||+|||+||++|||+||.+||+++
T Consensus 323 ~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~-~~~---~~~~~~~liRlSvGlEd~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 323 QLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIR-PAG---EVDFTGTLIRLHIGLEDVDDLIADLAAGFARI 394 (395)
T ss_pred HHHHHHHhCCcceeecccCCccceeccCCchhhhccC-Chh---HhcCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 78999999999999999999999998 454555554 332 44566799999999999999999999999864
No 9
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=1.6e-61 Score=460.72 Aligned_cols=330 Identities=46% Similarity=0.749 Sum_probs=305.4
Q ss_pred CccceeeccCCCCC-CCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH
Q 019543 8 GVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAV 86 (339)
Q Consensus 8 ~~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i 86 (339)
+++|.++|.+...+ .++++.+|||+|+||.+++..+..+|.|+|.++|++++||+++++++|++.+++++|||+|+.++
T Consensus 2 ~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~ 81 (380)
T PRK06176 2 RMQTKLIHGGISEDTTTGAVSVPIYQTSTYRQDAIGRPKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHAV 81 (380)
T ss_pred CccceeeECCCCCCCCCCCccCCcccCCceecCCCCCcCCCcccCCCChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHH
Confidence 35788999985433 47899999999999999876555679999999999999999999999999999999999999877
Q ss_pred HHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHHHHHH
Q 019543 87 THLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIAEMAH 119 (339)
Q Consensus 87 l~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~la~ 119 (339)
+.+++|||+|+++++.|+++..++. ++|.++|+
T Consensus 82 l~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~ 161 (380)
T PRK06176 82 FSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAK 161 (380)
T ss_pred HHHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHH
Confidence 7788999999999999987764332 99999999
Q ss_pred HcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhc
Q 019543 120 AHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 199 (339)
Q Consensus 120 ~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~ 199 (339)
+||+++|+|++++.++..+++.+++|++++|++|+++|+++.+||+++++++++.++++.+++..|..++|.+++++.++
T Consensus 162 ~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~g 241 (380)
T PRK06176 162 DHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRG 241 (380)
T ss_pred HcCCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhc
Confidence 99999999999998887788888999999999999999999999999987777888888888778889999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeec
Q 019543 200 VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITV 279 (339)
Q Consensus 200 l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v 279 (339)
++++..|++++++|+.+++++|+.+|.|..|+||+++++|+|++++++++++|++++|++++.+.+.+|+++|+.+.+++
T Consensus 242 l~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~~~~~~~ 321 (380)
T PRK06176 242 IKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFILGE 321 (380)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEcc
Confidence 99999999999999999999999999999999999999999999999999999999999977788899999999999999
Q ss_pred ccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 280 SFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 280 ~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
|||+.+|++.+|+.++|+.++++++++.|+++++||+|||+||++|||+||.+||+++
T Consensus 322 s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 322 SLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKI 379 (380)
T ss_pred CCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999875
No 10
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-62 Score=451.36 Aligned_cols=330 Identities=46% Similarity=0.705 Sum_probs=302.8
Q ss_pred CccceeeccCCCCCC--CCCccccccccceeeCCCC---C-CCC---CCcccCCCCchHHHHHHHHHhHhCCCeEEEcCc
Q 019543 8 GVSTLLMNFSNEFDP--YGALSTPLYQTATFKQPSA---T-ENG---PYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (339)
Q Consensus 8 ~~~~~~~~~~~~~~~--~~~~~~pi~~~~~~~~~~~---~-~~~---~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~s 78 (339)
.++|.+.|.++..+. .++|.+||+.++++.|... . +.. +|.|+|.+||++..||..++++.|++++++|+|
T Consensus 21 ~~~t~~~~~g~~~~~~~~~~v~~pI~~~~s~tfk~~~~~~~~~~~~~~~~Ysr~~nPt~~~le~~iaal~ga~~~l~fsS 100 (409)
T KOG0053|consen 21 HLDTNLLHAGQDPEKAIHNAVAPPIYATLSTTFKQDLNEGEHGGNLDGYDYSRSGNPTRDVLESGIAALEGAAHALLFSS 100 (409)
T ss_pred ccchhhhhcccccchhccccccCceecccceeecccCccccccccccccccccCCCCchHHHHHHHHHHhCCceEEEecc
Confidence 478999999987665 8999999995444444332 2 223 499999999999999999999999999999999
Q ss_pred HHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH----------------------------------------------
Q 019543 79 GMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS---------------------------------------------- 111 (339)
Q Consensus 79 G~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~---------------------------------------------- 111 (339)
||+|+.. ++.|+++||+|++.+..|+++.++++
T Consensus 101 GmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~~~i~~~t~~V~~ESPsNPll~v~D 180 (409)
T KOG0053|consen 101 GMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKILKAIKENTKAVFLESPSNPLLKVPD 180 (409)
T ss_pred cHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHHHhhccCceEEEEECCCCCcccccc
Confidence 9999875 56689999999999999999987765
Q ss_pred -HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCCh
Q 019543 112 -RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 190 (339)
Q Consensus 112 -~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~ 190 (339)
++|.++||++|++|+||+|.+++++.+++++|+||+++|++|+++||++++||.++.+.+++..+++..++..|+.++|
T Consensus 181 I~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p 260 (409)
T KOG0053|consen 181 IEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDP 260 (409)
T ss_pred HHHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCH
Confidence 9999999999999999999999999999999999999999999999999999999998778999999999999999999
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCc-ceEEEeeCCHHHHHHHH
Q 019543 191 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG-SVLSFLTGSLALSKHVV 269 (339)
Q Consensus 191 ~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~-~ivs~~~~~~~~~~~~~ 269 (339)
+++++..++++++..|++++.+|+..++++|+++|.+++|+||++++||+|++++++.+|.+ +++++..++.+.+.+|+
T Consensus 261 ~~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~ 340 (409)
T KOG0053|consen 261 FDLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFY 340 (409)
T ss_pred HHHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999876544 45555678888899999
Q ss_pred ccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcCC
Q 019543 270 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 338 (339)
Q Consensus 270 ~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~~ 338 (339)
++|+.+.+++|+|+++||+++|+.|+|++ +.++|+..|+.+++||+|||+|+.+|||++|.+||+++.
T Consensus 341 ~~LK~~~~a~SlG~~eSL~~~p~~mth~~-~~e~~~~~Gi~~~LVRvSVGiEd~~dL~~d~~~Al~~~~ 408 (409)
T KOG0053|consen 341 DALKLFTKAPSLGGNESLAEPPAIMTHAS-ELEEREKFGIDPNLVRVSVGIEDIEDLIKDFQQALEKAK 408 (409)
T ss_pred HhhhhhhcccCcCccchhhcchhhhccCC-CHHHHHhcCCCCCcEEEEeccCCHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999 999999999999999999999999999999999999864
No 11
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.8e-61 Score=459.63 Aligned_cols=330 Identities=40% Similarity=0.635 Sum_probs=303.2
Q ss_pred CccceeeccCCC-CCCCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH
Q 019543 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAV 86 (339)
Q Consensus 8 ~~~~~~~~~~~~-~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i 86 (339)
+++|+++|.+.. .+.++++.||||+||||.|++.++..+|.|+|..+|++++||++||+++|.+.+++++||++|+..+
T Consensus 4 ~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~ 83 (386)
T PRK08045 4 KQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLV 83 (386)
T ss_pred CcccceeEcCCCCCCCCCCccCCccCCcceecCCccccCCceeeCCCCccHHHHHHHHHHHhCCCeEEEECCHHHHHHHH
Confidence 467999999854 3447999999999999999887655679999999999999999999999999999999999999864
Q ss_pred -HHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHHHHH
Q 019543 87 -THLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIAEMA 118 (339)
Q Consensus 87 -l~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~la 118 (339)
..+++|||+|+++++.|+++..++. ++|.++|
T Consensus 84 l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia 163 (386)
T PRK08045 84 TTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLA 163 (386)
T ss_pred HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHH
Confidence 4589999999999999987553221 9999999
Q ss_pred HHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHh
Q 019543 119 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 198 (339)
Q Consensus 119 ~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~ 198 (339)
+++|+++|+|++|+.+...+++..++|++++|++|+++|+++.++|+++++++++.++++..++.+|..++|++++++++
T Consensus 164 ~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~r 243 (386)
T PRK08045 164 REAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLR 243 (386)
T ss_pred HHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 99999999999999988778888899999999999999999999999988766788888877778899999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee-CCHHHHHHHHccCCccee
Q 019543 199 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYFSI 277 (339)
Q Consensus 199 ~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~-~~~~~~~~~~~~L~~~~i 277 (339)
+|+++..|++++.+|+.+++++|+.+|.|+.|+||++++||+|++++++++|.|++++|.+ ++.+.+.+|+++|+.+.+
T Consensus 244 gl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~ 323 (386)
T PRK08045 244 GLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTL 323 (386)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhccceeE
Confidence 9999999999999999999999999999999999999999999999999999999999999 456778899999999999
Q ss_pred ecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 278 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 278 ~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
++|||+.+|++.+|+.++|+.++++++++.|+++++||+|||+||++|||+||.+||+++
T Consensus 324 ~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 383 (386)
T PRK08045 324 AESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_pred eccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999864
No 12
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.4e-61 Score=465.42 Aligned_cols=337 Identities=39% Similarity=0.618 Sum_probs=302.0
Q ss_pred CCCCCCCCccceeeccCCCC-CCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCC
Q 019543 1 MSVEEEPGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKAD 71 (339)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~ 71 (339)
||-|.+.+++|+++|.+... +.++++.+|||+|+||.|++.+ ...+|.|+|.++|+++.||+.||+++|++
T Consensus 1 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~leg~~ 80 (431)
T PRK08248 1 MSEERTFRLETLAIHAGQEIDPTTGSRAVPIYQTTSYGFRDSEHAANLFSLKEFGNIYTRIMNPTTDVFEKRIAALEGGI 80 (431)
T ss_pred CcccccCCcchhheeCCcCCCCCCCCccCCeeCCCccccCCHHHHHhhhccccCCceeECCCCchHHHHHHHHHHHhCCC
Confidence 77888899999999998543 3479999999999999998764 23468899999999999999999999999
Q ss_pred eEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH---------------------------------------
Q 019543 72 RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------- 111 (339)
Q Consensus 72 ~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------- 111 (339)
++++++||++|+.. +..++++||+|+++++.|+++...+.
T Consensus 81 ~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai~~~tklV~l~sp~N 160 (431)
T PRK08248 81 GALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAITDKTKALFAETIGN 160 (431)
T ss_pred cEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhcCCCCeEEEEECCCC
Confidence 99999999999985 55689999999999999988664332
Q ss_pred --------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhH----------
Q 019543 112 --------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL---------- 173 (339)
Q Consensus 112 --------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l---------- 173 (339)
++|+++|+++|+++|+|++++++....++.+++|++++|++|+++|+|+.+||+++.+.+..
T Consensus 161 PtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~ 240 (431)
T PRK08248 161 PKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGL 240 (431)
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccc
Confidence 99999999999999999999988777778889999999999999999999999988654211
Q ss_pred ----------------------HHHHHHHHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEe
Q 019543 174 ----------------------AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVN 231 (339)
Q Consensus 174 ----------------------~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~ 231 (339)
...........|..++|+++|+++++|++++.|++++++|+.+++++|+++|.|+.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~ 320 (431)
T PRK08248 241 TEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVS 320 (431)
T ss_pred cCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEE
Confidence 1112234456799999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCchHhHhhhc-CCCcceEEEee-CCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCC
Q 019543 232 YAGLPEHPGHELHYSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 309 (339)
Q Consensus 232 ~p~~~~~~~~~~~~~~~-~~~~~ivs~~~-~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~ 309 (339)
||++++||+|+++++++ +|.|++++|++ ++.+.+.+|+++|+.+.+++|||+.+|++++|+.++|+.+++++++++|+
T Consensus 321 yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi 400 (431)
T PRK08248 321 YPGLPSHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGV 400 (431)
T ss_pred CCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCC
Confidence 99999999999999998 67899999998 56677899999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 310 TEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 310 ~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
++++||||||+||++|||+||.+||++.
T Consensus 401 ~~~liRlsvGlEd~~dL~~Dl~~Al~~~ 428 (431)
T PRK08248 401 TPGLVRLSVGTEAIDDILDDLRQAIRQS 428 (431)
T ss_pred CCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999864
No 13
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=5.2e-61 Score=457.34 Aligned_cols=330 Identities=77% Similarity=1.172 Sum_probs=304.2
Q ss_pred ccceeeccCCCCCCCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH
Q 019543 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (339)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ 88 (339)
++|+++|.+...+.++++.+|||+|+||.+++..+..+|.|+|.++|++++||+++++++|++++++|+||++|+.+++.
T Consensus 1 ~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~ 80 (378)
T TIGR01329 1 LSTLLVNTDNKNDPYDASSMPIYQTATFKQPLAIENGPYDYTRSGNPTRTALESLLAKLDKADRAFAFSSGMAALDVITR 80 (378)
T ss_pred CCceeEeCCCCCCCCCCcCCCeecCcceecCCccccCCCccCCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH
Confidence 46889999854445789999999999999987655567999999999999999999999999999999999999987667
Q ss_pred hcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHHHHHHHc
Q 019543 89 LLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIAEMAHAH 121 (339)
Q Consensus 89 ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~la~~~ 121 (339)
++++||+|+++++.|+++..++. ++|+++|++|
T Consensus 81 ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~ 160 (378)
T TIGR01329 81 LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQ 160 (378)
T ss_pred HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHc
Confidence 88999999999999988754321 9999999999
Q ss_pred CCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh
Q 019543 122 GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 201 (339)
Q Consensus 122 g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~ 201 (339)
|+++|+|++++++...+++..++|++++|++|+++|+++.++|+++++++.+.++++..+...|..++|.++++++++++
T Consensus 161 g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~ 240 (378)
T TIGR01329 161 NALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIK 240 (378)
T ss_pred CCEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCC
Confidence 99999999999888778888899999999999999998888999998777777888877777799999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeeccc
Q 019543 202 TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSF 281 (339)
Q Consensus 202 ~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~ 281 (339)
+++.|++++.+|+..++++|+++|.++.|.||+++++|+|+++++++.+.+++++|.+++.+.+.+|++.|+.+++++|+
T Consensus 241 tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~ 320 (378)
T TIGR01329 241 TLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSF 320 (378)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCC
Confidence 99999999999999999999999999999999999999999999998889999999998777789999999999999999
Q ss_pred CCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcCC
Q 019543 282 GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 338 (339)
Q Consensus 282 G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~~ 338 (339)
|+.+|++++|+.++|+.+++++++..|+++++||||||+||++|||+||.+||+++|
T Consensus 321 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~~ 377 (378)
T TIGR01329 321 GSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFVTAP 377 (378)
T ss_pred CCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999887
No 14
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=3.7e-61 Score=460.59 Aligned_cols=330 Identities=36% Similarity=0.639 Sum_probs=301.5
Q ss_pred CCccceeeccCCCC-CCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcC
Q 019543 7 PGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (339)
Q Consensus 7 ~~~~~~~~~~~~~~-~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~ 77 (339)
..++|+++|.+... +.++++.+|||+++||.|++.+ +..+|.|+|.++|++++||+++|+++|++++++|+
T Consensus 7 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~s 86 (398)
T PRK08249 7 AGVGTKAVWAGEKEYLPYGATQVPVVLSVAYGYDDIDEWYDVALGKKPGHIYSRNTNPTVQAFEEKVRILEGAEAATAFS 86 (398)
T ss_pred CCcccceeeCCCCCCCCCCCccCCccCCcceecCCHHHHHHhhcCCcCCccccCCCChHHHHHHHHHHHHhCCCeEEEeC
Confidence 36789999998543 4579999999999999998764 23468999999999999999999999999999999
Q ss_pred cHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH---------------------------------------------
Q 019543 78 SGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------------- 111 (339)
Q Consensus 78 sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------------- 111 (339)
||++|+..+ ..+++|||+|+++++.|+++..++.
T Consensus 87 sG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i~~~tklV~ie~p~NPtg~v~ 166 (398)
T PRK08249 87 TGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEIAKGCDLLYLETPTNPTLKIV 166 (398)
T ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhcCCCCeEEEEECCCCCCCccC
Confidence 999999864 4689999999999999987654321
Q ss_pred --HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCC
Q 019543 112 --RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 189 (339)
Q Consensus 112 --~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~ 189 (339)
++|.++|++||+++|+|++|+.+...+++..++|++++|+||+++|+++.+||+++++ ++++++++..+...|..++
T Consensus 167 dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~-~~l~~~l~~~~~~~g~~~s 245 (398)
T PRK08249 167 DIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGS-KELMEQVYHYREINGATMD 245 (398)
T ss_pred CHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECC-HHHHHHHHHHHHhcCCCCC
Confidence 8999999999999999999998877777778899999999999999998889998875 5788888888888899999
Q ss_pred hHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee-CCHHHHHHH
Q 019543 190 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHV 268 (339)
Q Consensus 190 ~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~-~~~~~~~~~ 268 (339)
|..+++++++++++..|++++++|+++++++|+++|.|+.|+||+++++|+|+++++++.|.|++++|++ ++.+.+.+|
T Consensus 246 ~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f 325 (398)
T PRK08249 246 PMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRL 325 (398)
T ss_pred HHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 566778899
Q ss_pred HccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 269 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 269 ~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+++|+.+.+++|||+.+|++.+|+.++|+.+++++++..|+++++||||||+||++|||+||.+||+++
T Consensus 326 ~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 394 (398)
T PRK08249 326 LPKLRYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGIEDTEDLIADLEQAFAHL 394 (398)
T ss_pred HHhCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999863
No 15
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=5.5e-61 Score=455.71 Aligned_cols=326 Identities=30% Similarity=0.506 Sum_probs=292.5
Q ss_pred CCCCccceeeccCCC-CCCCCCccccccccceeeCCCCCC----CCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcH
Q 019543 5 EEPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATE----NGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (339)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~~~~~~~~pi~~~~~~~~~~~~~----~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG 79 (339)
+.++++|+++|.+.. .+.++++.+|||+||||.|++.++ ..+|.|+|.+||+++.||+.++.+++++.+++|+||
T Consensus 9 ~~~~~~t~~~~~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~y~YsR~gnPt~~~Le~~la~le~~~~~v~~sSG 88 (395)
T PRK05967 9 EKAGINTRLAHDGNDPGDYHGFVNPPVVHASTVLFPDAETMATRGQKYTYGTRGTPTTDALCKAIDALEGSAGTILVPSG 88 (395)
T ss_pred ccCCcccceeeCCCCCCCCCCCccCCccCCcceecCChHHhhcccCCCccCCCCChHHHHHHHHHHHHhCCCCEEEECcH
Confidence 345678999999854 345799999999999999987652 356999999999999999999999999999999999
Q ss_pred HHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------
Q 019543 80 MAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS----------------------------------------------- 111 (339)
Q Consensus 80 ~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~----------------------------------------------- 111 (339)
|+|+.+ ++++++|||+|+++++.|+++..++.
T Consensus 89 ~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al~~~TklV~lesPsNP~l~v~dl 168 (395)
T PRK05967 89 LAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLMRPNTKVVHTEAPGSNTFEMQDI 168 (395)
T ss_pred HHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHH
Confidence 999985 55799999999999999999875442
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChH
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 191 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~ 191 (339)
++|+++|+++|+++++|++++++++.+|+.+|+|++++|++|+++||+++++|+++.++ +..++++.....+|..++|.
T Consensus 169 ~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~-~~~~~l~~~~~~~G~~~~p~ 247 (395)
T PRK05967 169 PAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANE-KCWPQLLEAHGTLGLCAGPD 247 (395)
T ss_pred HHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcCH-HHHHHHHHHHHHcCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999887664 56777776777789999999
Q ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-C----HHHHH
Q 019543 192 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-S----LALSK 266 (339)
Q Consensus 192 ~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-~----~~~~~ 266 (339)
++|+++++|+++..|++++.+|+..+++||+++|.|+.|+||++++||+|++++++++|+|++++|++. + .+.+.
T Consensus 248 da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~ 327 (395)
T PRK05967 248 DTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAH 327 (395)
T ss_pred HHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999985 3 67789
Q ss_pred HHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 267 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 267 ~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+|+++|+.+.+++|||+.+|+++|+ .+ +.+.+.+.|+.+++||||||+||++|||+||.+||+++
T Consensus 328 ~f~~~l~l~~~~~slG~~~sLi~~~-~~-----~~~~~~~~~~~~~liRlSvGlEd~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 328 AFLDALEIFGLGYSWGGYESLALHV-KL-----GDRTVAKAPYAGPVIRLQIGLEDVPDLKADLERGFAAA 392 (395)
T ss_pred HHHHhCCcceEccCCCCcceeeeeC-CC-----ChhHhhhccCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999873 33 33444446888899999999999999999999999864
No 16
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.7e-61 Score=456.89 Aligned_cols=324 Identities=29% Similarity=0.500 Sum_probs=291.1
Q ss_pred ccceeeccCCCCCC-CCCccccccccceeeCCCCCC---------CCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCc
Q 019543 9 VSTLLMNFSNEFDP-YGALSTPLYQTATFKQPSATE---------NGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (339)
Q Consensus 9 ~~~~~~~~~~~~~~-~~~~~~pi~~~~~~~~~~~~~---------~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~s 78 (339)
++|+++|.+...++ ++++.+|||+|+||.|++.++ ..+|.|+|.++|++++||+++|++++++++++|+|
T Consensus 5 ~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~~~s 84 (394)
T PRK09028 5 KATKIVSAGRDKKWTKGVINPPVFRASTVVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGGAGTALYPS 84 (394)
T ss_pred ccceeEEcCCCCCCCCCCccCCeeCCCCcccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCCCcEEEECC
Confidence 57999999854443 599999999999999887531 13488999999999999999999999999999999
Q ss_pred HHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH----------------------------------------------
Q 019543 79 GMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS---------------------------------------------- 111 (339)
Q Consensus 79 G~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~---------------------------------------------- 111 (339)
||+|+.+ ++++++|||+|+++++.|+++..++.
T Consensus 85 G~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l~~~TklV~lespsNPtg~v~d 164 (394)
T PRK09028 85 GAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELIRPNTKVLFLESPGSITMEVQD 164 (394)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCcHHH
Confidence 9999985 55689999999999999988765332
Q ss_pred -HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCCh
Q 019543 112 -RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 190 (339)
Q Consensus 112 -~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~ 190 (339)
++|+++||+||+++++|++|+++...+|+.+|+|++++|++||++||+++++|+++.+ +++.++++..+...|..++|
T Consensus 165 l~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~-~~~~~~l~~~~~~~G~~~~p 243 (394)
T PRK09028 165 VPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATAN-EKHWDQLREHSYLMGQCTSP 243 (394)
T ss_pred HHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECC-HHHHHHHHHHHHhcCCCCCH
Confidence 9999999999999999999999988899999999999999999999999999988655 46777787777778999999
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC--CHHHHHHH
Q 019543 191 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--SLALSKHV 268 (339)
Q Consensus 191 ~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~--~~~~~~~~ 268 (339)
.++|+++++|+++..|++++.+|+.++++||+++|.|+.|+||++++||+|++++++++|.|++++|.++ +.+.+.+|
T Consensus 244 ~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f 323 (394)
T PRK09028 244 DDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTAL 323 (394)
T ss_pred HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999995 56778999
Q ss_pred HccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 269 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 269 ~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+++|+.+.+++|||+.+|++.+|+.++|... ++..|+.+++||||||+||.+|||+||.+||++.
T Consensus 324 ~~~l~l~~~~~slG~~~sLv~~p~~~~~~~~----~~~~~~~~~liR~svGlEd~~dLi~Dl~~Al~~~ 388 (394)
T PRK09028 324 VEGMQHFKMGFSWGGFESLILGVFGINKLRT----ATNWDFSKPLIRLHIGLEDVDDLIADLEAGFERY 388 (394)
T ss_pred HHhCCcceEecccCCCcceeECCCCcCccCc----hhhhcCCCCeEEEEeCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988776643 3447788899999999999999999999999853
No 17
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1e-60 Score=460.57 Aligned_cols=331 Identities=38% Similarity=0.584 Sum_probs=295.8
Q ss_pred CCccceeeccCCCC-CCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcC
Q 019543 7 PGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (339)
Q Consensus 7 ~~~~~~~~~~~~~~-~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~ 77 (339)
.+++|+++|.+... ..++++.+|||+|+||.|++.+ ...+|.|+|.++|++++||+++++++|++.+++|+
T Consensus 12 ~~~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Ysr~~~p~~~~Le~~lA~l~g~~~av~~s 91 (436)
T PRK07812 12 WSFETKQIHAGQTPDPATNARALPIYQTTSYTFDDTDHAAALFGLAEPGNIYTRIMNPTQDVVEQRIAALEGGVAALLLA 91 (436)
T ss_pred CCcchhheeCCCCCCCCCCCccCCCcCCCCcccCCHHHHHHhhcCCcCCccccCCCCchHHHHHHHHHHHhCCCeEEEEc
Confidence 56789999998543 3478999999999999998753 23468899999999999999999999999999999
Q ss_pred cHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH---------------------------------------------
Q 019543 78 SGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------------- 111 (339)
Q Consensus 78 sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------------- 111 (339)
|||+|+.+ +.+++++||+|++++..|+++..++.
T Consensus 92 SG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~l~~ai~~~tklV~ie~~sNp~G~v 171 (436)
T PRK07812 92 SGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDAWRAAVRPNTKAFFAETISNPQIDV 171 (436)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHHHHHhCCCCCeEEEEECCCCCCCee
Confidence 99999974 66689999999999999988764322
Q ss_pred ---HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcCh-----------------
Q 019543 112 ---RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE----------------- 171 (339)
Q Consensus 112 ---~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~----------------- 171 (339)
++|.++||+||+++|||++++++...+++.+|+|++++|++|+++|+|+.+||+++.+..
T Consensus 172 ~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~ 251 (436)
T PRK07812 172 LDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPS 251 (436)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcc
Confidence 999999999999999999999998888888899999999999999999999999885321
Q ss_pred ------------hHHHHHH-HHHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCC
Q 019543 172 ------------RLAKELY-FLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 238 (339)
Q Consensus 172 ------------~l~~~l~-~~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~ 238 (339)
.+..+++ ...+..|..++|.++|+++++|++++.|++++++|+.+++++|+++|+|+.|+||++++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~ 331 (436)
T PRK07812 252 YHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSS 331 (436)
T ss_pred cccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCC
Confidence 0111122 234467999999999999999999999999999999999999999999999999999999
Q ss_pred CchHhHhhhc-CCCcceEEEee-CCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEE
Q 019543 239 PGHELHYSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 316 (339)
Q Consensus 239 ~~~~~~~~~~-~~~~~ivs~~~-~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRi 316 (339)
|+|+++++++ +|.|++++|++ ++.+.+.+|+++|+.+.+++|||+.+|++++|+.++|+.+++++++++|+++++|||
T Consensus 332 p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRl 411 (436)
T PRK07812 332 PWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRL 411 (436)
T ss_pred ccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEE
Confidence 9999999988 78999999998 566778999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCHHHHHHHHHHHHhcC
Q 019543 317 SVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 317 svg~e~~~~li~~l~~al~~~ 337 (339)
|||+||++|||+||.+||+++
T Consensus 412 SvGlEd~~dli~dl~~Al~~~ 432 (436)
T PRK07812 412 AVGIEGIDDILADLEAGFAAA 432 (436)
T ss_pred EeccCCHHHHHHHHHHHHHhh
Confidence 999999999999999999864
No 18
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=2.4e-60 Score=452.96 Aligned_cols=329 Identities=43% Similarity=0.718 Sum_probs=301.3
Q ss_pred CccceeeccCCCCC-CCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH
Q 019543 8 GVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAV 86 (339)
Q Consensus 8 ~~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i 86 (339)
.++|+++|.+...+ .++++.+|||++++|.+.+..+..+|.|+|+++|++++||+.+|+++|++++++++||++|+.++
T Consensus 3 ~~~t~~~~~~~~~~~~~~~~~~pi~~ss~~~~~~~~~~~~~~Y~R~~~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~ 82 (382)
T TIGR02080 3 KQATIAVRSGLNSDTQYGCVVPPIYLSTTYNFTGFNEPRAYDYSRSGNPTRDLLQQALAELEGGAGAVVTNTGMSAIHLV 82 (382)
T ss_pred CcccceeecCCCCCCCCCCccCCeeCCceeEeCCcCccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHH
Confidence 46799999985433 37999999999999998765444568999999999999999999999999999999999999864
Q ss_pred H-HhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHHHHH
Q 019543 87 T-HLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIAEMA 118 (339)
Q Consensus 87 l-~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~la 118 (339)
+ ++++|||+|+++++.|+++..++. ++|+++|
T Consensus 83 l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la 162 (382)
T TIGR02080 83 TTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLA 162 (382)
T ss_pred HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHH
Confidence 4 589999999999999987654322 8999999
Q ss_pred HHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHh
Q 019543 119 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 198 (339)
Q Consensus 119 ~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~ 198 (339)
+++|++||+|++|+.+....++..++|++++|+||+++|+++.++|+++++++++.++++.++..+|..++|++++++++
T Consensus 163 ~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr 242 (382)
T TIGR02080 163 KAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLR 242 (382)
T ss_pred HHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHc
Confidence 99999999999999887777777789999999999999998889999988777888888888888899999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-CHHHHHHHHccCCccee
Q 019543 199 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFSI 277 (339)
Q Consensus 199 ~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-~~~~~~~~~~~L~~~~i 277 (339)
+++++..|++++.+|+..+++||+.+|.|+.|+||++++||+|+++++++.|.|++++|++. +.+.+.+|+++|+.+.+
T Consensus 243 ~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~ 322 (382)
T TIGR02080 243 GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGLSLFTL 322 (382)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcCCcceE
Confidence 99999999999999999999999999999999999999999999999999999999999994 56667899999999999
Q ss_pred ecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 278 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 278 ~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
++|||+.+|++++|+.++|+.+++++++..|+++++||||||+||++|||+||.+||++
T Consensus 323 ~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 323 AESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGLEDADDLIADLEQGLRA 381 (382)
T ss_pred eccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999985
No 19
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.6e-60 Score=459.24 Aligned_cols=334 Identities=37% Similarity=0.555 Sum_probs=296.9
Q ss_pred CCCCCccceeeccCCCC-CCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEE
Q 019543 4 EEEPGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAL 74 (339)
Q Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l 74 (339)
..+++++|+++|.+... +.++++.+|||+|+||.|++.. +..+|.|+|.++|++++||+.+++++|+++++
T Consensus 9 ~~~~~~~t~~~~~~~~~~~~~~~~~~Pi~~sstf~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~le~~la~l~g~~~~v 88 (437)
T PRK05613 9 ADQWGFETRSIHAGQSVDSDTSARNLPIYQTTSYVFDSAEHAKQRFALEDLGPIYSRLTNPTVEALENRIASLEGGVHAV 88 (437)
T ss_pred cccCCcchHheeCCCCCCCCCCCccCCEeCCCCcccCCHHHHHHhhccccCCceeeCccChHHHHHHHHHHHHhCCCeEE
Confidence 45677889999998543 3579999999999999998753 23468999999999999999999999999999
Q ss_pred EcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH------------------------------------------
Q 019543 75 CFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS------------------------------------------ 111 (339)
Q Consensus 75 ~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~------------------------------------------ 111 (339)
+|+||++|+.+ ++.++++||+||+++..|+++..++.
T Consensus 89 ~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~~tk~V~~e~~~Np~ 168 (437)
T PRK05613 89 AFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQPNTKAFFGETFANPQ 168 (437)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCccCeEEEEECCCCCC
Confidence 99999999975 55688999999999999998753221
Q ss_pred ------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcCh-h------------
Q 019543 112 ------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-R------------ 172 (339)
Q Consensus 112 ------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~-~------------ 172 (339)
++|+++|+++|+++++|++++.|...+++..|+|++++|++|+++|+++.+||+++.+++ .
T Consensus 169 ~~v~di~~I~~la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~ 248 (437)
T PRK05613 169 ADVLDIPAVAEVAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFP 248 (437)
T ss_pred CcccCHHHHHHHHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCC
Confidence 999999999999999999999998888888899999999999999999999999986432 0
Q ss_pred ---------------------HHH-HHHHHHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEE
Q 019543 173 ---------------------LAK-ELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKV 230 (339)
Q Consensus 173 ---------------------l~~-~l~~~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v 230 (339)
+.. ......+.+|..++|+++|+++++|+++..|++++++|+.+++++|+++|.|+.|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V 328 (437)
T PRK05613 249 YFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKV 328 (437)
T ss_pred CCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 000 1123345679999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCchHhHhhhc-CCCcceEEEee-CCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCC
Q 019543 231 NYAGLPEHPGHELHYSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 308 (339)
Q Consensus 231 ~~p~~~~~~~~~~~~~~~-~~~~~ivs~~~-~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g 308 (339)
+||++++||+|+++++++ .+.|++++|++ ++.+.+.+|+++|+.+.+++|||+.+|+++||+.++|+.+++++++++|
T Consensus 329 ~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~G 408 (437)
T PRK05613 329 NFAGLKDSPWYATKEKLGLKYTGSVLSFDIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAG 408 (437)
T ss_pred ECCCCCCCccHHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcC
Confidence 999999999999999986 67899999999 4667889999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 309 LTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 309 ~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+++++||||||+||++|||+||.+||+++
T Consensus 409 i~~~liRlsvGlE~~~dLi~Dl~~Al~~~ 437 (437)
T PRK05613 409 ITQATVRLSVGIEDIDDIIADLEGGFAAI 437 (437)
T ss_pred CCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999863
No 20
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=2.2e-60 Score=454.73 Aligned_cols=329 Identities=39% Similarity=0.708 Sum_probs=297.1
Q ss_pred CccceeeccCCC-CCCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCc
Q 019543 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (339)
Q Consensus 8 ~~~~~~~~~~~~-~~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~s 78 (339)
+++|+++|.+.. .+.++++.||||++|||.|++.+ ...+|.|+|.++|++++||+++|+++|++++++++|
T Consensus 3 ~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~av~~~s 82 (391)
T TIGR01328 3 TFATRAIHAGYPPKDQFGALTPPIYQTSTFVFDSCEQGGNRFAGQESGYIYSRLGNPTVSNLEGRIAFLEGTEAAVATSS 82 (391)
T ss_pred CcccceeeCCccCCCCCCCccCCcccCcceecCChHHHHHhhcCCcCCCceeCCCCchHHHHHHHHHHHhCCCcEEEECC
Confidence 467999999854 34579999999999999998763 234699999999999999999999999999999999
Q ss_pred HHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH----------------------------------------------
Q 019543 79 GMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS---------------------------------------------- 111 (339)
Q Consensus 79 G~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~---------------------------------------------- 111 (339)
|++|+.+ +.++++|||+|+++++.|+++...+.
T Consensus 83 G~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~~~i~~~tklV~le~p~Np~G~v~d 162 (391)
T TIGR01328 83 GMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVKAHIKDNTKIVYFETPANPTMKLID 162 (391)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhhccCCeEEEEECCCCCCCcccC
Confidence 9999985 44688999999999998876543321
Q ss_pred -HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH--HhcCCCC
Q 019543 112 -RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAEGSGL 188 (339)
Q Consensus 112 -~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~--~~~~~~~ 188 (339)
++|.++|+++|+++|+|++|+.+...+++..++|++++|++|+++|+++.+||++++++ +++++++... ...|..+
T Consensus 163 l~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~-~li~~l~~~~~~~~~g~~l 241 (391)
T TIGR01328 163 MERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGKA-ELLQQIRMVGIKDMTGSVI 241 (391)
T ss_pred HHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcCH-HHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999998887788889999999999999999988899998764 7777777543 2457789
Q ss_pred ChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-CHHHHHH
Q 019543 189 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKH 267 (339)
Q Consensus 189 ~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-~~~~~~~ 267 (339)
+|..+++++++|+++..|++++++|+++++++|+++|+|+.|.||++++||+|+++++++++.|++++|.++ +.+.+.+
T Consensus 242 ~~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~ 321 (391)
T TIGR01328 242 SPFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKK 321 (391)
T ss_pred CcHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999994 6677899
Q ss_pred HHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 268 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 268 ~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
|+++|+.+.+++|||+.+|++++|+.++|+.+++++++..|+++++||||||+||.+|||+||.+||+++
T Consensus 322 f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 391 (391)
T TIGR01328 322 LLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGLEDADDLIADLKQALDAL 391 (391)
T ss_pred HHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999864
No 21
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=6.2e-60 Score=449.59 Aligned_cols=327 Identities=48% Similarity=0.807 Sum_probs=302.6
Q ss_pred ccceeeccCCCCC-CCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH
Q 019543 9 VSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT 87 (339)
Q Consensus 9 ~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il 87 (339)
++|+++|++...+ .++++.||||+|+||.+++..+..+|.|+|.++|+.++||+.+|+++|++.+++++||++|+.+++
T Consensus 3 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~ 82 (377)
T PRK07671 3 AKTKLIHGGIIGDPSTGAVSVPIYQVSTYKQEAVGKHQGYEYSRTGNPTRAALEELIAVLEGGHAGFAFGSGMAAITAVM 82 (377)
T ss_pred cccceeeCCCCCCCCCCCccCCccCCcceecCCCCCcCCCCcCCCCChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHH
Confidence 5799999985443 479999999999999998765556799999999999999999999999999999999999988777
Q ss_pred HhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHHHHHHH
Q 019543 88 HLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIAEMAHA 120 (339)
Q Consensus 88 ~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~la~~ 120 (339)
.+++|||+|+++++.|++++..+. ++|.++|++
T Consensus 83 ~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~ 162 (377)
T PRK07671 83 MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKE 162 (377)
T ss_pred HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHH
Confidence 788999999999999987653221 999999999
Q ss_pred cCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch
Q 019543 121 HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 200 (339)
Q Consensus 121 ~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l 200 (339)
+|+++++|++++.+...++...++|++++|+||+++|+++.++|+++++++++.++++..+...|..++|..++++++++
T Consensus 163 ~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l 242 (377)
T PRK07671 163 KGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGL 242 (377)
T ss_pred cCCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCc
Confidence 99999999999988777778889999999999999999888999998887778888988888889999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecc
Q 019543 201 KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVS 280 (339)
Q Consensus 201 ~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~ 280 (339)
+++..|++++++|+++++++|+++|+|..|+||+++++|+|+++++++.|.|++++|.+++.+.+.+|+++|+.+.+++|
T Consensus 243 ~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~l~~~~~s 322 (377)
T PRK07671 243 KTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETANKVLERLQYFTLAES 322 (377)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCCHHHHHHHHHhCCcceEccC
Confidence 99999999999999999999999999999999999999999999999999999999999887889999999999999999
Q ss_pred cCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 281 FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 281 ~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
||+.+|++++|+.++|+.+++++++.+|+++++||||||+||++|||+||.+||+
T Consensus 323 ~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 377 (377)
T PRK07671 323 LGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGIEDGEDLIEDLAQALA 377 (377)
T ss_pred CCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999985
No 22
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=2.9e-60 Score=450.46 Aligned_cols=322 Identities=36% Similarity=0.620 Sum_probs=294.8
Q ss_pred CCccceeeccCCCC-CCCCCccccccccceeeCCCCCC--------CCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcC
Q 019543 7 PGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (339)
Q Consensus 7 ~~~~~~~~~~~~~~-~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~ 77 (339)
++++|.++|.+... +.++++.+|||+++||.+++.++ ..+|.|+|.++|++++||+++++++|++++++|+
T Consensus 7 ~~~~t~~~~~~~~~~~~~~~~~~pI~~ss~~~~~~~~~~~~~~~~~~~~~~Y~r~~~P~~~~lE~~la~leg~~~av~~s 86 (384)
T PRK06434 7 NGFNTRAVQSGELRDPRFGNVTTPIFETSTFVYPNSEKEAYMDSTRGMPYIYTRWGNPTVQAFEEKYAVLENAEHALSFS 86 (384)
T ss_pred CCcccceeECCCCCCCCCCCccCCeeCCcceecCChHHhhhccccccCCcceeCCCChhHHHHHHHHHHHhCCCcEEEeC
Confidence 56789999998543 34799999999999999987631 2459999999999999999999999999999999
Q ss_pred cHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH---------------------------------------------
Q 019543 78 SGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------------- 111 (339)
Q Consensus 78 sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------------- 111 (339)
|||+|+.+ +.++++|||+|++++..|+++..++.
T Consensus 87 SG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~l~~~~tklv~~e~~snpt~~v~D 166 (384)
T PRK06434 87 SGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLDFDPSNYDLIYAESITNPTLKVPD 166 (384)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhheeecCCCeeEEEEEcCCCCCceeec
Confidence 99999985 55689999999999888888775442
Q ss_pred -HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCCh
Q 019543 112 -RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 190 (339)
Q Consensus 112 -~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~ 190 (339)
++|+++||++| +++|+++++++.++++..++|++++|.+|+++||++.+||+|+++++++.++++.++..+|..++|
T Consensus 167 i~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~ 244 (384)
T PRK06434 167 IKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDP 244 (384)
T ss_pred HHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCH
Confidence 99999999998 567999999998899999999999999999999999999999988778888888777778999999
Q ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHc
Q 019543 191 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVE 270 (339)
Q Consensus 191 ~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~ 270 (339)
++|++++++|++++.|++++++|+++++++|+.+|.|+.|+||+++ ++++++.|.|++++|.+++.+.+.+|++
T Consensus 245 ~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~g~g~~~sf~l~~~~~~~~f~~ 318 (384)
T PRK06434 245 IQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLRGFGGMLSFELRSMEDVHKFIR 318 (384)
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcCCCCceEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999984 7888888999999999977778899999
Q ss_pred cCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 271 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 271 ~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+|+.+.+++|||+.+|++++|+.++|+.+++++++..|+++++||||||+||++|||+||.+||++
T Consensus 319 ~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGlEd~~dLi~dl~~Al~~ 384 (384)
T PRK06434 319 NLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGIEDIDDLIKDIENALSK 384 (384)
T ss_pred hCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999975
No 23
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=4.6e-60 Score=453.67 Aligned_cols=329 Identities=35% Similarity=0.556 Sum_probs=298.1
Q ss_pred CCCccceeeccCCCCCCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcC
Q 019543 6 EPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (339)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~ 77 (339)
..+++|+++|.+...+.++++.+|||+++||.|++.+ ...+|.|+|.++|++++||++||+++|++++++++
T Consensus 13 ~~~~~t~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~al~~~ 92 (403)
T PRK07810 13 GVSQATIGVRGGLLRSGFEETAEALYLTSGYVYESAAAAEAAFTGELDRFVYSRYGNPTVSMFEERLRLIEGAEACFATA 92 (403)
T ss_pred cCCcchhheeCCCCCCCCCCccCCccCCCccccCCHHHHHHHhccCcCCcceeCCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 4567899999985445578999999999999998754 23468899999999999999999999999999999
Q ss_pred cHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH---------------------------------------------
Q 019543 78 SGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------------- 111 (339)
Q Consensus 78 sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------------- 111 (339)
||++|+.. +.++++|||+|++++..|++++..+.
T Consensus 93 sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~tklV~~esp~Nptg~v~ 172 (403)
T PRK07810 93 SGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWEEALSVPTQAVFFETPSNPMQSLV 172 (403)
T ss_pred ChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCeec
Confidence 99999975 44688999999999888877653321
Q ss_pred --HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCC
Q 019543 112 --RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 189 (339)
Q Consensus 112 --~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~ 189 (339)
++|+++|+++|+++|+|++|+.+...+++..++|++++|++|+++|+|+++||+++++++.+.+.++.+.+..|..++
T Consensus 173 dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s 252 (403)
T PRK07810 173 DIAAVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALS 252 (403)
T ss_pred CHHHHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999998888888899999999999999999999999998875444456666667889999
Q ss_pred hHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-----CHHH
Q 019543 190 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-----SLAL 264 (339)
Q Consensus 190 ~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-----~~~~ 264 (339)
|+++++++++|++++.|++++.+|+.+++++|+++|.|+.|+||++++||+|+++++++.+.|++++|+++ +.+.
T Consensus 253 ~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~ 332 (403)
T PRK07810 253 AFNAWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKR 332 (403)
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999985 3567
Q ss_pred HHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 265 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 265 ~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
+.+|+++|+.+.+++|||+.+|++.+|+.++|+.++.+++++.|+++++||||+|+|+.+|||+||.+||
T Consensus 333 ~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGlE~~~dli~dl~~Al 402 (403)
T PRK07810 333 AFEVLDKLRVIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGLEDTDDLIADLDRAL 402 (403)
T ss_pred HHHHHHhCCceEEeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHhh
Confidence 8899999999999999999999999999999999999999999999999999999999999999999997
No 24
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.8e-59 Score=449.68 Aligned_cols=333 Identities=41% Similarity=0.678 Sum_probs=302.9
Q ss_pred CCCCccceeeccCCCC-CCCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHH
Q 019543 5 EEPGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAAL 83 (339)
Q Consensus 5 ~~~~~~~~~~~~~~~~-~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~ 83 (339)
.|..++|+++|.+... +.++++.|||+++++|.+++.....+|.|+|+.+|++++||+++|+++|++++++++||++|+
T Consensus 9 ~~~~~~t~~~~~~~~~~~~~~~~~~pi~~ss~~~~~~~~~~~~~~y~R~~~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai 88 (405)
T PRK08776 9 APCSAATAAVRAGIDRDTAYGAVTPPIVLSSNFSFDGFGNKRQYDYTRSGNPTRDLLGEALAELEGGAGGVITATGMGAI 88 (405)
T ss_pred CCcCccchheeCCCCCCCCCCCccCCEeccceEEeCCCCcccCCcccCCCChHHHHHHHHHHHHhCCCceEEEcCHHHHH
Confidence 3566789999998543 447999999999999998776555579999999999999999999999999999999999999
Q ss_pred HHH-HHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHH
Q 019543 84 AAV-THLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIA 115 (339)
Q Consensus 84 ~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~ 115 (339)
.++ ..+++|||+|+++.+.|+++..++. ++|+
T Consensus 89 ~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~ 168 (405)
T PRK08776 89 NLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVI 168 (405)
T ss_pred HHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHH
Confidence 854 4589999999999999987543321 9999
Q ss_pred HHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHH
Q 019543 116 EMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 195 (339)
Q Consensus 116 ~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~ 195 (339)
++|+++|+++|+|++|+.+...+++.+++|++++|++|+++|+++++||+++++++++.++++..+...|..++|+.+++
T Consensus 169 ~la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l 248 (405)
T PRK08776 169 EAAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFL 248 (405)
T ss_pred HHHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 99999999999999999887777788899999999999999998888999988777788888877777788899999999
Q ss_pred HHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee-CCHHHHHHHHccCCc
Q 019543 196 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKY 274 (339)
Q Consensus 196 ~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~-~~~~~~~~~~~~L~~ 274 (339)
+++++++++.|++++.+|+..++++|+++|.|+.|.||++++||+|+++++++.|.|++++|++ ++.+.+.+|+++|+.
T Consensus 249 ~~~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l 328 (405)
T PRK08776 249 TLRGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRY 328 (405)
T ss_pred HHhhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 566778899999999
Q ss_pred ceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 275 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 275 ~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+.+++|||+.+|+++||+.++|+.++++.++..|+++++||||||+||++|||+||.+||+++
T Consensus 329 ~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~ 391 (405)
T PRK08776 329 FTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLARA 391 (405)
T ss_pred ceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999863
No 25
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.6e-59 Score=452.67 Aligned_cols=335 Identities=37% Similarity=0.586 Sum_probs=296.6
Q ss_pred CCCCCccceeeccCCC-CCCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEE
Q 019543 4 EEEPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAL 74 (339)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l 74 (339)
-.+++++|+++|.+.. .+.++++.+|||+|+||.|++.+ ...+|.|+|.++|++++||+++|+++|+++++
T Consensus 4 ~~~~~~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~y~R~~~p~~~~le~~lA~l~g~~~av 83 (433)
T PRK08134 4 MSPPGFDTLALHAGAAPDPATGARAVPIHLTTSFVFRDSDHAAALFNLERAGHVYSRISNPTVAVLEERVAALEGGVGAI 83 (433)
T ss_pred CCCCCcchhheeCCCCCCCCCCCccCCccCCCccccCCHHHHHHhhcccccCceeecCcChHHHHHHHHHHHHhCCCcEE
Confidence 3466788999999854 34478999999999999998764 23569999999999999999999999999999
Q ss_pred EcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH------------------------------------------
Q 019543 75 CFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS------------------------------------------ 111 (339)
Q Consensus 75 ~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~------------------------------------------ 111 (339)
+|+|||+|+.+ +..++++||+||+++..|+++..++.
T Consensus 84 ~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~~~i~~~TklV~~e~~~np~g 163 (433)
T PRK08134 84 ATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWRAAIRPNTRLLFGETLGNPGL 163 (433)
T ss_pred EeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCcccC
Confidence 99999999985 55589999999999999988755431
Q ss_pred -----HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcCh-h-------------
Q 019543 112 -----RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-R------------- 172 (339)
Q Consensus 112 -----~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~-~------------- 172 (339)
++|+++|++||+++++|+++++|....++.+|+|++++|.+|+++|+++++||+++.+.. .
T Consensus 164 ~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~ 243 (433)
T PRK08134 164 EVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEP 243 (433)
T ss_pred cccCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCC
Confidence 899999999999999999999998888888899999999999999999999998874311 0
Q ss_pred -----------------HHHHHH-HHHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCC
Q 019543 173 -----------------LAKELY-FLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 234 (339)
Q Consensus 173 -----------------l~~~l~-~~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~ 234 (339)
+..+.+ ...+.+|..++|.++++++++|++++.|++++++|+.+++++|+++|.|+.|+||+
T Consensus 244 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~ 323 (433)
T PRK08134 244 YAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPE 323 (433)
T ss_pred cccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 000011 11235688999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchHhHhhhc-CCCcceEEEee-CCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCC
Q 019543 235 LPEHPGHELHYSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTED 312 (339)
Q Consensus 235 ~~~~~~~~~~~~~~-~~~~~ivs~~~-~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~ 312 (339)
+++||+|+++++++ +|.|++++|++ ++.+.+.+|+++|+.+.+++|||+.+|++++|+.++|+.++++++++.|++++
T Consensus 324 l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~ 403 (433)
T PRK08134 324 LESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEG 403 (433)
T ss_pred CCCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCC
Confidence 99999999999998 78999999998 45677899999999999999999999999999999999999999999999999
Q ss_pred eEEEEeccCCHHHHHHHHHHHHhcCC
Q 019543 313 LVRISVGIEDVNDLISDLDKALRTGP 338 (339)
Q Consensus 313 ~lRisvg~e~~~~li~~l~~al~~~~ 338 (339)
+||||||+||+||||+||.+||++++
T Consensus 404 liRlsvGlE~~~dli~dl~~Al~~~~ 429 (433)
T PRK08134 404 TIRLSIGLEDADDLIDDLKRALKAAE 429 (433)
T ss_pred eEEEEeccCCHHHHHHHHHHHHHhhh
Confidence 99999999999999999999998753
No 26
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.2e-59 Score=453.20 Aligned_cols=329 Identities=38% Similarity=0.620 Sum_probs=292.9
Q ss_pred ccceeeccCCC-CCCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcH
Q 019543 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (339)
Q Consensus 9 ~~~~~~~~~~~-~~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG 79 (339)
++|+++|.+.. .+.++++.+|||+|+||.|++.+ +..+|.|+|..+|++++||++||+++|++.+++++||
T Consensus 3 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~g~~~~l~~ssG 82 (425)
T PRK06084 3 LETLAIHAGYSPDPTTKAVAVPIYQTTSYAFDDTQHGADLFDLKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAVASG 82 (425)
T ss_pred cchhheeCCcCCCCCCCCccCCEeCCCCcccCCHHHHHHhhccccCCccccCCCCchHHHHHHHHHHHhCCCceeEehhH
Confidence 56899999854 34478999999999999998763 2346999999999999999999999999999999999
Q ss_pred HHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------
Q 019543 80 MAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS----------------------------------------------- 111 (339)
Q Consensus 80 ~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~----------------------------------------------- 111 (339)
++|+.+ +.++++|||+|+++.+.|+++...+.
T Consensus 83 ~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~~tklV~lesp~NPtG~v~dl 162 (425)
T PRK06084 83 MAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDERTKAVFCESIGNPAGNIIDI 162 (425)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhccCCcEEEEeCCCCCCCeecCH
Confidence 999985 45688999999999999987764432
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChh-HH----------------
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LA---------------- 174 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~-l~---------------- 174 (339)
++|.++|++||++||+|++|+++...+++..++|++++|++|+++|+++++||+++.++.. +.
T Consensus 163 ~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (425)
T PRK06084 163 QALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSY 242 (425)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCccc
Confidence 9999999999999999999999988888888999999999999999999999999864320 00
Q ss_pred ------------HHH----HHHHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCC
Q 019543 175 ------------KEL----YFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 238 (339)
Q Consensus 175 ------------~~l----~~~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~ 238 (339)
... ......+|..++|+++++++++|++++.|++++++|+.+++++|+++|.|+.|+||++++|
T Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~ 322 (425)
T PRK06084 243 HGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDH 322 (425)
T ss_pred ccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCc
Confidence 001 1123357899999999999999999999999999999999999999999999999999999
Q ss_pred CchHhHhhhcCC-CcceEEEee-CCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEE
Q 019543 239 PGHELHYSQAKG-AGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 316 (339)
Q Consensus 239 ~~~~~~~~~~~~-~~~ivs~~~-~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRi 316 (339)
|+|+++++++.+ +|++++|++ ++.+.+.+|+++|+.+.+++|||+.+|++++|+.++|+.++++++++.|+++++|||
T Consensus 323 p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~ 402 (425)
T PRK06084 323 PEHELARRYMGGKPASILSFGIKGGQAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRL 402 (425)
T ss_pred ccHHHHHHhCCCCcceEEEEEecCCHHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEE
Confidence 999999999877 899999998 566678899999999999999999999999999999999999999999999999999
Q ss_pred EeccCCHHHHHHHHHHHHhcC
Q 019543 317 SVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 317 svg~e~~~~li~~l~~al~~~ 337 (339)
|||+||++|||+||.+||++.
T Consensus 403 svGlEd~~dLi~dl~~Al~~~ 423 (425)
T PRK06084 403 SIGIEHIDDIIADLAQALDAS 423 (425)
T ss_pred EeccCCHHHHHHHHHHHHHhh
Confidence 999999999999999999864
No 27
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=3.3e-59 Score=447.61 Aligned_cols=333 Identities=33% Similarity=0.554 Sum_probs=300.7
Q ss_pred CCCCccceeeccCCCCCCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEc
Q 019543 5 EEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (339)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~ 76 (339)
+.++++|+++|.+...+.++++.+|||++++|.+++.+ +..+|.|+|+.+|++++||+++|+++|++.++++
T Consensus 7 ~~~~~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~~~~ 86 (398)
T PRK07504 7 RKWRPATRLVHSGTLRSQFGETSEALFLTQGFVYDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDARAT 86 (398)
T ss_pred ccCCcccceeeCCCCCCCCCCCcCCeECCCCccCCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCeeeEe
Confidence 55677899999986445578899999999999987653 2356899999999999999999999999999999
Q ss_pred CcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH--------------------------------------------
Q 019543 77 TSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS-------------------------------------------- 111 (339)
Q Consensus 77 ~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------------------------------- 111 (339)
+||++|+.. ++.+++|||+|+++++.|+++...+.
T Consensus 87 ~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~ai~~~tklV~lesp~NptG~v 166 (398)
T PRK07504 87 ASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWEKAVRPNTKVFFLESPTNPTLEV 166 (398)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCcEe
Confidence 999999974 55688999999999999987643321
Q ss_pred ---HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCC
Q 019543 112 ---RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 188 (339)
Q Consensus 112 ---~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~ 188 (339)
++|.++|+++|+++|+|++|+.+....+...++|++++|+||+++|+|+.+||+++++++.+.+.++...+..|..+
T Consensus 167 ~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~ 246 (398)
T PRK07504 167 IDIAAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSL 246 (398)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999988877777889999999999999999999999999876444445666566778999
Q ss_pred ChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee-CCHHHHHH
Q 019543 189 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKH 267 (339)
Q Consensus 189 ~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~-~~~~~~~~ 267 (339)
+|..+++++++|+++..|++++++|+++++++|+++|+|..|+||+++++|+|++++++++|+|++++|.+ ++.+.+.+
T Consensus 247 s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~ 326 (398)
T PRK07504 247 SPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFR 326 (398)
T ss_pred CHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 56777899
Q ss_pred HHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 268 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 268 ~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
|+++|+.+.+++|||+.+|++++|+.++|+.+++++++..|+++++||||||+||++|||+||.+||++.
T Consensus 327 ~~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 396 (398)
T PRK07504 327 FLNALKIVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGLEDTDDLIEDLAAALKKV 396 (398)
T ss_pred HHHhCCcceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999864
No 28
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=4e-59 Score=443.30 Aligned_cols=321 Identities=27% Similarity=0.459 Sum_probs=286.1
Q ss_pred ceeeccCCCC-CCCCCccccccccceeeCCCCC----CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH
Q 019543 11 TLLMNFSNEF-DPYGALSTPLYQTATFKQPSAT----ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA 85 (339)
Q Consensus 11 ~~~~~~~~~~-~~~~~~~~pi~~~~~~~~~~~~----~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~ 85 (339)
|+++|.+... +.++++.||||+||||.|++.. +..+|.|+|.+||+++.||++||+++|++++++|+|||+|+.+
T Consensus 1 t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~ 80 (377)
T TIGR01324 1 TRLIHSGRQPRFSQGSVNPPLQRASTVLFDSHAAQRRAKGELTYGRRGTLTHFALQDAMCELEGGAGCYLYPSGLAAVTN 80 (377)
T ss_pred CeeEECCCCCCCCCCCccCCeeCCCceeeCChhhhcCCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEECcHHHHHHH
Confidence 5678887543 4479999999999999998753 2356999999999999999999999999999999999999985
Q ss_pred -HHHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHHHH
Q 019543 86 -VTHLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIAEM 117 (339)
Q Consensus 86 -il~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~l 117 (339)
+.++++|||+|+++++.|+++..++. ++|+++
T Consensus 81 al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~l 160 (377)
T TIGR01324 81 SILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKA 160 (377)
T ss_pred HHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHH
Confidence 55689999999999999987653321 899999
Q ss_pred HHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHH
Q 019543 118 AHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 197 (339)
Q Consensus 118 a~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~ 197 (339)
|+++|+++|+|++|+.|...+++.+|+|++++|++|+++|+++++||++++++ +..++++.....+|..++|.++++.+
T Consensus 161 a~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~-~~~~~l~~~~~~~G~~l~p~~a~~~~ 239 (377)
T TIGR01324 161 ARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANA-RTWDQLREHSYLMGQMVDADDAYTTL 239 (377)
T ss_pred HHHcCCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeCH-HHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 99999999999999999988899999999999999999999999999998875 56777776667789999999999999
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC--CHHHHHHHHccCCcc
Q 019543 198 RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--SLALSKHVVETTKYF 275 (339)
Q Consensus 198 ~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~--~~~~~~~~~~~L~~~ 275 (339)
++++++..|++++++|+.+++++|+++|.|..|+||+++++|+|+++++++++.|++++|.+. +.+++.+|+++|+.+
T Consensus 240 rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~ 319 (377)
T TIGR01324 240 RGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLF 319 (377)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999984 467789999999999
Q ss_pred eeecccCCcccceeccc-cccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 276 SITVSFGSVKSLISMPC-FMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 276 ~i~v~~G~~~s~~~~p~-~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
++++|||+.+|++.+|. .++|.. +...|+.+++||||||+||++|||+||.+||+++
T Consensus 320 ~~~~slG~~~sl~~~~~~~~~~~~-----~~~~~~~~~liR~svGlE~~~dl~~dl~~al~~~ 377 (377)
T TIGR01324 320 GLGYSWGGYESLALCNQPELGHRP-----NIKRNLEGPLIRVHIGLENVDDLKADLKAGFEAI 377 (377)
T ss_pred eEeccCCCccceeecCCCCCCHHH-----HHhccCCCCEEEEEeCCCCHHHHHHHHHHHHhcC
Confidence 99999999999997322 456643 3467788899999999999999999999999864
No 29
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=1e-58 Score=443.36 Aligned_cols=331 Identities=39% Similarity=0.672 Sum_probs=300.1
Q ss_pred CCCCccceeeccCCCCCCCCCccccccccceeeCCCCCC--------CCCCcccCCCCchHHHHHHHHHhHhCCCeEEEc
Q 019543 5 EEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (339)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~ 76 (339)
.+.+++|+++|.+...+.++++.+|||++++|.+++..+ ..+|.|+|..+|++++||+++++++|+++++++
T Consensus 3 ~~~~~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~v~~ 82 (390)
T PRK08133 3 DSLGFDTLAVRAGQLRSPFGEHSEALFLTSSFVFESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALEGAEACVAT 82 (390)
T ss_pred ccCCcchhheeCCCCCCCCCCccCCccCCCCcccCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 345678999999865556789999999999999876531 245889999999999999999999999999999
Q ss_pred CcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH--------------------------------------------
Q 019543 77 TSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS-------------------------------------------- 111 (339)
Q Consensus 77 ~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------------------------------- 111 (339)
+||++|+.+ +.++++|||+|+++++.|+++..++.
T Consensus 83 ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~ie~p~NptG~v 162 (390)
T PRK08133 83 ASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRPNTKLFFLETPSNPLTEL 162 (390)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCCc
Confidence 999999985 55688999999999999887664332
Q ss_pred ---HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCC
Q 019543 112 ---RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 188 (339)
Q Consensus 112 ---~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~ 188 (339)
++|.++|++||+++|+|++++.+....++..++|++++|+||+++|+++++||++++++ +.++++....+..|..+
T Consensus 163 ~dl~~I~~la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~-~~~~~~~~~~~~~g~~~ 241 (390)
T PRK08133 163 ADIAALAEIAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSK-ELMEEVFGFLRTAGPTL 241 (390)
T ss_pred CCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCH-HHHHHHHHHHHHhCCCC
Confidence 99999999999999999999988877777788999999999999999998999999875 56677776666778899
Q ss_pred ChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee-CCHHHHHH
Q 019543 189 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKH 267 (339)
Q Consensus 189 ~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~-~~~~~~~~ 267 (339)
++..+++++++++++..|++++.+|+.+++++|+++|+|+.|+||+++++|+|+++++++.|+|++++|++ ++.+.+.+
T Consensus 242 ~~~~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~ 321 (390)
T PRK08133 242 SPFNAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWR 321 (390)
T ss_pred CHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 46777899
Q ss_pred HHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 268 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 268 ~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
|+++|+.+.+++|||+.+|++.+|+.++|+.+++++++..|+++++||||||+||.||||+||.+||++
T Consensus 322 f~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 390 (390)
T PRK08133 322 VIDATRLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGLEDVADIKADLARGLAA 390 (390)
T ss_pred HHHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999974
No 30
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=3e-58 Score=439.78 Aligned_cols=329 Identities=44% Similarity=0.734 Sum_probs=297.2
Q ss_pred CCCCccceeeccCCCC-CCCCCccccccccceeeCCCCCC-CCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHH
Q 019543 5 EEPGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSATE-NGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAA 82 (339)
Q Consensus 5 ~~~~~~~~~~~~~~~~-~~~~~~~~pi~~~~~~~~~~~~~-~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A 82 (339)
.+.+++|+++|.+... ..++++.+|||+|+||.+++.+. ..+|.|+|..+|.+++||+++|+++|.+.+++++||++|
T Consensus 9 ~~~~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~lA~~~g~~~~i~~~sG~~A 88 (388)
T PRK07811 9 ANQGFATRAIHAGYEPDPATGAVNPPIYASSTFAQDGVGGLRGGYEYARTGNPTRTALEEQLAALEGGAYGRAFSSGMAA 88 (388)
T ss_pred CCCCcccceeeCCCCCCCCCCCccCCccCCcceecCCcccccCCCcccCCCCccHHHHHHHHHHHhCCCceEEeCCHHHH
Confidence 3456789999998543 34799999999999999887553 356899999999999999999999999999999999999
Q ss_pred HHHH-HHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHH
Q 019543 83 LAAV-THLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKI 114 (339)
Q Consensus 83 ~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I 114 (339)
+.++ ..+++|||+|+++++.|+++...+. ++|
T Consensus 89 i~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I 168 (388)
T PRK07811 89 TDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAITPRTKLIWVETPTNPLLSITDIAAL 168 (388)
T ss_pred HHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHH
Confidence 9864 4589999999999999987654322 999
Q ss_pred HHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHH
Q 019543 115 AEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW 194 (339)
Q Consensus 115 ~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~ 194 (339)
+++|++||++||+|++++.+....++..++|++++|++|+++|+++++||+++++++++.++++..+...|..++|.+++
T Consensus 169 ~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~ 248 (388)
T PRK07811 169 AELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAY 248 (388)
T ss_pred HHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 99999999999999999998877788889999999999999999888899999887778788877776778889999999
Q ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee-CCHHHHHHHHccCC
Q 019543 195 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTK 273 (339)
Q Consensus 195 ~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~-~~~~~~~~~~~~L~ 273 (339)
+++++|++++.|++++++|++.++++|+++|+|+.|+||++++||+|+++++++.|.|++++|++ ++.+.+.+|+++|+
T Consensus 249 l~~~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~ 328 (388)
T PRK07811 249 LTLRGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTK 328 (388)
T ss_pred HHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 56777899999999
Q ss_pred cceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 274 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 274 ~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.+.+++|||+.+|++.+|+.++|+.++++ ..|+++++||||||+||++|||+||.+||++
T Consensus 329 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 388 (388)
T PRK07811 329 VFTLAESLGGVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLADLEQALGQ 388 (388)
T ss_pred cceeeccCCCCcceEeCCcccCcccCCHh---hcCCCCCEEEEEeCCCCHHHHHHHHHHHhhC
Confidence 99999999999999999999999998854 4699999999999999999999999999974
No 31
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-58 Score=440.72 Aligned_cols=314 Identities=32% Similarity=0.523 Sum_probs=281.2
Q ss_pred CCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCC
Q 019543 23 YGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTG 93 (339)
Q Consensus 23 ~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~G 93 (339)
++++.||||+|+||.+++.+ ...+|.|+|.+||++++||+++++++|++++++|+|||+|+.+ +.++++||
T Consensus 7 ~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~G 86 (397)
T PRK05939 7 HGAVHKPIHTSVTYGYEDARDLIDVFQGKKPGFTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRAG 86 (397)
T ss_pred CCCccCCccCCCCeecCCHHHHHHhhcCCcCCCCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCCC
Confidence 58999999999999998753 1246899999999999999999999999999999999999986 44689999
Q ss_pred CEEEEcCCCccchHHHHH----------------------------------------------HHHHHHHHHcCCEEEE
Q 019543 94 EEIVAGDDLYGGTDRLLS----------------------------------------------RKIAEMAHAHGALLLV 127 (339)
Q Consensus 94 D~Vi~~~~~y~~~~~~~~----------------------------------------------~~I~~la~~~g~~liv 127 (339)
|+|+++++.|+++..++. ++|+++|++||+++++
T Consensus 87 d~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~liv 166 (397)
T PRK05939 87 DHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDATDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVV 166 (397)
T ss_pred CEEEECCCccccHHHHHHHHHhcCCEEEEECCCCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEE
Confidence 999999999887653222 8999999999999999
Q ss_pred eCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcCh-h------H-------------HHHHH-HHHHhcCC
Q 019543 128 DNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-R------L-------------AKELY-FLQNAEGS 186 (339)
Q Consensus 128 D~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~-~------l-------------~~~l~-~~~~~~~~ 186 (339)
|++++++...++...|+|++++|+||+++|+|+++||+++.+.. . + ...++ ...+.+|.
T Consensus 167 D~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 246 (397)
T PRK05939 167 DNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGA 246 (397)
T ss_pred ECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCC
Confidence 99999887777888899999999999999999999998874321 0 0 11122 12346799
Q ss_pred CCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHH
Q 019543 187 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSK 266 (339)
Q Consensus 187 ~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~ 266 (339)
.++|.++++++++|+++..|++++.+|+.++++||+++|.|+.|+||+++++|+|+++++++.+.|++++|++.+...+.
T Consensus 247 ~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~~~~~ 326 (397)
T PRK05939 247 TLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADGIDCF 326 (397)
T ss_pred CCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997666788
Q ss_pred HHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 267 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 267 ~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+|+++|+.+.+++|||+.+|++++|+.++|+.+++++++..|+++++||||||+||++|||+||.+||++
T Consensus 327 ~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGlEd~~dLi~dl~~Al~~ 396 (397)
T PRK05939 327 DFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGIEDEADLIADFEQALDA 396 (397)
T ss_pred HHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999975
No 32
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=5.1e-58 Score=442.63 Aligned_cols=331 Identities=40% Similarity=0.638 Sum_probs=293.2
Q ss_pred CCCccceeeccCCCCC-CCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEc
Q 019543 6 EPGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (339)
Q Consensus 6 ~~~~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~ 76 (339)
+.+++|+++|.+...+ .++++.+|||+++||.|++.+ +..++.|+|.++|++++||+++++++|.+.++++
T Consensus 5 ~~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~al~~ 84 (427)
T PRK05994 5 SPGFATLAVHAGAQPDPTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRITNPTNAVLEERVAALEGGTAALAV 84 (427)
T ss_pred CCCcchhheECCcCCCCCCCCccCCCcCCCCcccCCHHHHHHhhccccCCcceECCCCccHHHHHHHHHHHhCCCcEEEE
Confidence 4467899999985433 368999999999999998753 1235889999999999999999999999999999
Q ss_pred CcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH--------------------------------------------
Q 019543 77 TSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS-------------------------------------------- 111 (339)
Q Consensus 77 ~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~-------------------------------------------- 111 (339)
+||++|+.++ .++++|||+|+++++.|+++...+.
T Consensus 85 ~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~tklV~vesp~NptG~v 164 (427)
T PRK05994 85 ASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAITPRTKAIFIESIANPGGTV 164 (427)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCee
Confidence 9999999864 4589999999999999987654321
Q ss_pred ---HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcCh-----------------
Q 019543 112 ---RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE----------------- 171 (339)
Q Consensus 112 ---~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~----------------- 171 (339)
++|.++|++||+++|+|++|+++...+++..++|++++|++|+++|+++.+||+++....
T Consensus 165 ~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~ 244 (427)
T PRK05994 165 TDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRP 244 (427)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcc
Confidence 999999999999999999999998888888999999999999999999999999885321
Q ss_pred h-----HHHH----------HHHHHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCC
Q 019543 172 R-----LAKE----------LYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 236 (339)
Q Consensus 172 ~-----l~~~----------l~~~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~ 236 (339)
. +.+. .....+..|..++|++|++++++|++++.|++++++|+.+++++|+++|+|+.|+||+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~ 324 (427)
T PRK05994 245 EYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLP 324 (427)
T ss_pred hhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCC
Confidence 0 1111 111234578999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHhHhhhc-CCCcceEEEee-CCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeE
Q 019543 237 EHPGHELHYSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 314 (339)
Q Consensus 237 ~~~~~~~~~~~~-~~~~~ivs~~~-~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~l 314 (339)
+||+|+++++++ .|+|++++|++ ++.+.+.+|+++|+.+.+++|||+.+|++++|+.++|+.+++++++..|+++++|
T Consensus 325 ~~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~li 404 (427)
T PRK05994 325 DDPYHALAQKYSPKGAGAVFTFGLKGGYEAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVV 404 (427)
T ss_pred CCccHHHHHHhcCCCceEEEEEEecCCHHHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcE
Confidence 999999999985 78999999998 5667789999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCCHHHHHHHHHHHHhc
Q 019543 315 RISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 315 Risvg~e~~~~li~~l~~al~~ 336 (339)
|+|||+||++|||+||.+||++
T Consensus 405 RlsvGlE~~~dli~dl~~Al~~ 426 (427)
T PRK05994 405 RLSIGIEDVDDIIADLEQALAK 426 (427)
T ss_pred EEEeccCCHHHHHHHHHHHHhh
Confidence 9999999999999999999986
No 33
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=8.3e-58 Score=436.02 Aligned_cols=324 Identities=41% Similarity=0.666 Sum_probs=295.1
Q ss_pred cceeeccCCCCCCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHH
Q 019543 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMA 81 (339)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~ 81 (339)
+|+++|.+...+.++++.+|||++++|.+++.. ...+|.|+|+.+|.+++||+.+++++|++++++++||++
T Consensus 1 ~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~~~~~sG~~ 80 (380)
T TIGR01325 1 ATLAIRGGKERTEFREHAEALFLTSSFVYDSAAHAADRFAGEIPGFVYSRYANPTVAAFEERIAALEGAERAVATATGMS 80 (380)
T ss_pred CceeEECCCCCCCCCCccCCeeCCcceecCCHHHHHHhhccccCCcceecCCCchHHHHHHHHHHHhCCCcEEEECCHHH
Confidence 477899986445678999999999999987753 234689999999999999999999999999999999999
Q ss_pred HHHH-HHHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HH
Q 019543 82 ALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RK 113 (339)
Q Consensus 82 A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~ 113 (339)
|+.+ +.+++++||+|+++++.|+++...+. ++
T Consensus 81 Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~ 160 (380)
T TIGR01325 81 AIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKPNTKLVFVETPSNPLGELVDIAA 160 (380)
T ss_pred HHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCeeeCHHH
Confidence 9985 44588999999999888877643221 99
Q ss_pred HHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHH
Q 019543 114 IAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 193 (339)
Q Consensus 114 I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a 193 (339)
|.++|+++|+++|+|++++.+...+++..++|++++|++|+++|+++.+||++++++ ++++.++...+..|..++|.++
T Consensus 161 I~~la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~-~~~~~l~~~~~~~g~~~~p~~a 239 (380)
T TIGR01325 161 LAELAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSE-ELMAEVAVYLRHTGPAMSPFNA 239 (380)
T ss_pred HHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCH-HHHHHHHHHHHhhCCCCCHHHH
Confidence 999999999999999999988777788889999999999999999988999999875 6778888776678889999999
Q ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC
Q 019543 194 WICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK 273 (339)
Q Consensus 194 ~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~ 273 (339)
++++++++++..|++++.+++++++++|+++|+|+.|.||+++++|+|+++++++.|+|++++|++++.+.+.+|+++|+
T Consensus 240 ~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~f~~~l~ 319 (380)
T TIGR01325 240 WVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRAAAWKVLDAVE 319 (380)
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987778899999999
Q ss_pred cceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 274 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 274 ~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
.+.+++|||+.+|++.||+.++|..++++++++.|+.+++||||||+||++|||+||.+||
T Consensus 320 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al 380 (380)
T TIGR01325 320 LVSITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVGLEDVDDLIADLKRAL 380 (380)
T ss_pred cceEcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999996
No 34
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=9.7e-58 Score=432.13 Aligned_cols=317 Identities=44% Similarity=0.736 Sum_probs=289.2
Q ss_pred CCCCCCCCccceeeccCCCCC-CCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcH
Q 019543 1 MSVEEEPGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (339)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG 79 (339)
||-+. +++|.++|.+...+ .++++.||||+|+||.+++..+..+|.|+|.++|++++||+++|+++|++++++++||
T Consensus 1 ~~~~~--~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~Y~R~~~p~~~~le~~lA~leg~~~~v~~~sG 78 (364)
T PRK07269 1 MSKDL--HINTILAQAGIKSDEATGALVTPLHFSTTYQHPEFGQSTGFDYTRTKNPTRAKLEETLAAIESADYALATSSG 78 (364)
T ss_pred CCccC--CcccceeeCCCCCCCCCCCccCCccCCcceecCCCCCcCCcceeCCCCccHHHHHHHHHHHhCCCeEEEeCCH
Confidence 44443 57799999985433 4789999999999999987655567999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCccchHHHHH---------------------------------------------HHH
Q 019543 80 MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS---------------------------------------------RKI 114 (339)
Q Consensus 80 ~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~---------------------------------------------~~I 114 (339)
++|+.+++.+++|||+|+++.+.|++...++. ++|
T Consensus 79 ~aAi~~~l~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I 158 (364)
T PRK07269 79 MSAIVLAFSVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKV 158 (364)
T ss_pred HHHHHHHHHHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHH
Confidence 99998766778999999999999987764321 999
Q ss_pred HHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHH
Q 019543 115 AEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW 194 (339)
Q Consensus 115 ~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~ 194 (339)
+++|+++|+++|+|+|++++...++++.++|++++|++|+++||++++||+|+++++++.++++..+...|..++|++++
T Consensus 159 ~~la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~ 238 (364)
T PRK07269 159 AKLAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSY 238 (364)
T ss_pred HHHHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 99999999999999999988888888899999999999999999999999999887788888887776778999999999
Q ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCc
Q 019543 195 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY 274 (339)
Q Consensus 195 ~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~ 274 (339)
+++++|++++.|++++++|+++++++|+++|.|..|.||+ .|++++|.+.+.+.+.+|++.|+.
T Consensus 239 l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg----------------~gg~~sf~~~~~~~~~~f~~~l~~ 302 (364)
T PRK07269 239 LLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG----------------KGGMISFKVADETRIPHILNSLKV 302 (364)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC----------------cCcEEEEEECCHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999999996 479999999777778999999999
Q ss_pred ceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 275 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 275 ~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+.+++|+|+.+|++.+|+.++|+.+++++|..+|+.+++||+|||+||++|||+||.+||+
T Consensus 303 ~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE~~~dli~dl~~al~ 363 (364)
T PRK07269 303 FTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIEDARDLIADLKQALE 363 (364)
T ss_pred ceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999986
No 35
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=7.8e-58 Score=438.79 Aligned_cols=329 Identities=40% Similarity=0.666 Sum_probs=296.7
Q ss_pred CCccceeeccCCC-CCCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcC
Q 019543 7 PGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (339)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~ 77 (339)
-.++|+++|.+.. .+.++++.+|||+||||.|++.+ +..+|.|+|..+|.+++||+.+++++|++++++++
T Consensus 8 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~~ 87 (403)
T PRK07503 8 TGFSTRAIHHGYDPLDHGGALVPPVYLTATFAFPTAEYGAECFAGEEEGHFYSRISNPTLALLEQRMASLEGGEAAVALA 87 (403)
T ss_pred CCccchheeCCCCCCCCCCCccCCcccCcceecCChHHHHHhhccccCCceeeCCCCchHHHHHHHHHHHhCCCcEEEEc
Confidence 3578999999854 34479999999999999998763 23468999999999999999999999999999999
Q ss_pred cHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------------------------------------
Q 019543 78 SGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------------- 111 (339)
Q Consensus 78 sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------------- 111 (339)
||++|+.+++ .+++|||+|+++.+.|+++..++.
T Consensus 88 sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~le~p~NPtG~~~ 167 (403)
T PRK07503 88 SGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALKAAISDKTRMVYFETPANPNMRLV 167 (403)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHHHhcCccCcEEEEeCCCCCCCeee
Confidence 9999997544 588999999999998876543321
Q ss_pred --HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH--HHhcCCC
Q 019543 112 --RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSG 187 (339)
Q Consensus 112 --~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~--~~~~~~~ 187 (339)
++|+++|++||++||+|++|+.+...+++..++|++++|+||+++|+++.+||+++.+ +++.++++.. +...|..
T Consensus 168 di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~-~~l~~~l~~~~~~~~~g~~ 246 (403)
T PRK07503 168 DIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGG-KALADRIRLEGLKDMTGAV 246 (403)
T ss_pred CHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcC-HHHHHHHHhhhHHhCcCCC
Confidence 9999999999999999999998877777778899999999999999988899999855 5688888743 4556899
Q ss_pred CChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee-CCHHHHH
Q 019543 188 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSK 266 (339)
Q Consensus 188 ~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~-~~~~~~~ 266 (339)
++|+++++++++|++++.|++++.+|+++++++|+++|.|+.|+||+++++|+|+++++++.+.|++++|.+ ++.+.+.
T Consensus 247 ~s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~ 326 (403)
T PRK07503 247 MSPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGR 326 (403)
T ss_pred CCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999988999999998 5667788
Q ss_pred HHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 267 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 267 ~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+|.+.|+.+.+++|||+.+|++.+|..++|..++++++++.|+++++||||||+||++|||+||.+||++
T Consensus 327 ~~~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~Al~~ 396 (403)
T PRK07503 327 RFMNALQLFARAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGLEDVADILADLAQALDA 396 (403)
T ss_pred HHHHhCCcceeecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999975
No 36
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=1.1e-57 Score=440.04 Aligned_cols=330 Identities=35% Similarity=0.623 Sum_probs=297.1
Q ss_pred CCCccceeeccCCCCCC-CCCccccccccceeeCCCCCC------------------CCCCcccCCCCchHHHHHHHHHh
Q 019543 6 EPGVSTLLMNFSNEFDP-YGALSTPLYQTATFKQPSATE------------------NGPYDYTRSGNPTRDALESLLAK 66 (339)
Q Consensus 6 ~~~~~~~~~~~~~~~~~-~~~~~~pi~~~~~~~~~~~~~------------------~~~~~y~r~~~~~~~~le~~la~ 66 (339)
+.+++|+++|.+...+. ++++.+|||+||||.+++.++ ..+|.|+|+.+|+++.||+.||+
T Consensus 15 ~~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~Pt~~~Le~~lA~ 94 (427)
T PRK07049 15 ELHPETQMLNYGYDPELSEGAVKPPVFLTSTFVFRSAEDGRDFFDYVSGRKEPPAGEGAGLVYSRFNHPNSEIVEDRLAV 94 (427)
T ss_pred cCCcccceeeCCCCCCCCCCCccCCccCccceecCChHHHHhhhhccccccccccccccCccccCCCCcCHHHHHHHHHH
Confidence 45668999998854433 799999999999999877531 23488999999999999999999
Q ss_pred HhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH----------------------------------
Q 019543 67 LDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS---------------------------------- 111 (339)
Q Consensus 67 ~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~---------------------------------- 111 (339)
++|.+++++++||++|+.+ +.++++|||+|+++++.|+++..++.
T Consensus 95 leg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~ 174 (427)
T PRK07049 95 YEGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGR 174 (427)
T ss_pred HhCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCC
Confidence 9999999999999999985 45689999999999999987743321
Q ss_pred -------------------HHHHHHHHH------cCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEE
Q 019543 112 -------------------RKIAEMAHA------HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVL 166 (339)
Q Consensus 112 -------------------~~I~~la~~------~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v 166 (339)
++|.+++++ +++++|+||++..+...+++..++||+++|+||+++|+++.++|++
T Consensus 175 tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~G~v 254 (427)
T PRK07049 175 VSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAV 254 (427)
T ss_pred ceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEEEEE
Confidence 788888887 8999999999987776677777899999999999999888999999
Q ss_pred EEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCC--CCCCchHhH
Q 019543 167 AVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL--PEHPGHELH 244 (339)
Q Consensus 167 ~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~--~~~~~~~~~ 244 (339)
++++ ++++.++..+..+|..++|..+++++++|+++..|++++.+|++.++++|+++|+|+.|+||++ ++||+|+++
T Consensus 255 v~~~-~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~ 333 (427)
T PRK07049 255 LGRK-ALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVY 333 (427)
T ss_pred ECCH-HHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHH
Confidence 8764 6888888888788999999999999999999999999999999999999999999999999985 999999999
Q ss_pred hhhcCCCcceEEEee-CCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCH
Q 019543 245 YSQAKGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDV 323 (339)
Q Consensus 245 ~~~~~~~~~ivs~~~-~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~ 323 (339)
++++.|.|++++|++ ++.+.+.+|+++|+.+.+++|||+.+|++++|+.++|+.+++++++..|+++++||||||+||+
T Consensus 334 ~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~ 413 (427)
T PRK07049 334 KRQCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGIEHP 413 (427)
T ss_pred HhhCCCCccEEEEEEcCCHHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCcCCH
Confidence 999999999999998 5667789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc
Q 019543 324 NDLISDLDKALRT 336 (339)
Q Consensus 324 ~~li~~l~~al~~ 336 (339)
||||+||.+||++
T Consensus 414 ~dl~~dl~~al~~ 426 (427)
T PRK07049 414 DDLIADLAQALDA 426 (427)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999985
No 37
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.1e-57 Score=435.98 Aligned_cols=325 Identities=40% Similarity=0.668 Sum_probs=291.0
Q ss_pred CCCccceeeccCCCC-CCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEc
Q 019543 6 EPGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (339)
Q Consensus 6 ~~~~~~~~~~~~~~~-~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~ 76 (339)
.++++|+++|.+... +.++++.+|||+|+||.+++.+ ...+|.|+|+++|++++||+.+|+++|.++++++
T Consensus 3 ~~~~~t~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al~~ 82 (386)
T PRK06767 3 KKHMETALIHHGYTSEEHKGSLTPPLFQTSTFTFETAQQGEASFAGVDPSYIYSRLGNPTVKLFEERMAVLEGGEEALAF 82 (386)
T ss_pred CCCcccceeeCCCCCCCCCCCccCCccCccceecCCHHHHHHhhccCcCCccccCCCCcchHHHHHHHHHHhCCCcEEEE
Confidence 456889999998543 4478999999999999998754 2346899999999999999999999999999999
Q ss_pred CcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH--------------------------------------------
Q 019543 77 TSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS-------------------------------------------- 111 (339)
Q Consensus 77 ~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------------------------------- 111 (339)
+||++|+.+ +..+++|||+|+++++.|+++...+.
T Consensus 83 ~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~~~i~~~tklV~lesp~NptG~v 162 (386)
T PRK06767 83 GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIENKIRPNTKLIFVETPINPTMKL 162 (386)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhhCcCceEEEEeCCCCCCcee
Confidence 999999975 44689999999999998877654332
Q ss_pred ---HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHH-HHHHHhcCCC
Q 019543 112 ---RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL-YFLQNAEGSG 187 (339)
Q Consensus 112 ---~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l-~~~~~~~~~~ 187 (339)
++|.++|+++|+++++|++|+++....++..++|++++|+||+++|+++++||++++++ +.++.+ +..+...|..
T Consensus 163 ~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~-~~i~~~~~~~~~~~g~~ 241 (386)
T PRK06767 163 IDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKT-RALAEKIRPMRKDIGGI 241 (386)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeCh-HHHHHHHHHHHHHhCCC
Confidence 99999999999999999999988877788889999999999999999998899999886 455554 4555667888
Q ss_pred CChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-CHHHHH
Q 019543 188 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSK 266 (339)
Q Consensus 188 ~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-~~~~~~ 266 (339)
++|+.+++++++|+++..|++++++++++++++|+++|+|+.|.|| +|+++++++.+.|++++|.+. +.+.+.
T Consensus 242 ~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~~~gg~vsf~l~~~~~~~~ 315 (386)
T PRK06767 242 MAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMKRGGGVISFSIKGGKEETQ 315 (386)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCCCCCceEEEEEcCCHHHHH
Confidence 9999999999999999999999999999999999999999999998 688999999999999999984 566788
Q ss_pred HHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 267 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 267 ~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+|+++|+.+++++|||+.+|++++|+.++|+.++++++++.|+++++||||||+||++|||+||.+||+++
T Consensus 316 ~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 386 (386)
T PRK06767 316 AFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQALKKI 386 (386)
T ss_pred HHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999864
No 38
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-57 Score=432.53 Aligned_cols=325 Identities=39% Similarity=0.657 Sum_probs=294.2
Q ss_pred CccceeeccCCCCCCCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-H
Q 019543 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA-V 86 (339)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-i 86 (339)
.++|.++|.+. .+.++++.+|||+||||.+++. .+|.|+|.++|.+++||+++|+++|++.+++++||++|+.. +
T Consensus 2 ~~~t~~~~~~~-~~~~~~~~~pi~~~~~~~~~~~---~~~~y~r~~~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l 77 (376)
T PRK06460 2 KDATRTVREDI-DEATGAITTPIYQTTAYHYPEG---EKYRYSREANPTVLELTKKIVELENAEMGVAFSSGMGAISTTA 77 (376)
T ss_pred CcceeeeecCC-CCCCCCccCCccCCcceeeCCC---CCcceeCCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHH
Confidence 46799999985 3457899999999999999864 36899999999999999999999999999999999999985 4
Q ss_pred HHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHHHHHH
Q 019543 87 THLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIAEMAH 119 (339)
Q Consensus 87 l~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~la~ 119 (339)
..+++|||+|+++.+.|++++..+. ++|+++|+
T Consensus 78 ~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~ 157 (376)
T PRK06460 78 LALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCK 157 (376)
T ss_pred HHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHH
Confidence 5589999999999887766543221 89999999
Q ss_pred HcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhc
Q 019543 120 AHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 199 (339)
Q Consensus 120 ~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~ 199 (339)
+||+++|+|++|+.+....++..++|+++.|+||+++|+++.++|++++++ ++++.++..+..++..++|..+++++++
T Consensus 158 ~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~-~l~~~l~~~~~~~g~~~~~~~a~~~l~~ 236 (376)
T PRK06460 158 ENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGYG-KLLNVIDQMRRTLGTSLDPHAAYLTLRG 236 (376)
T ss_pred HcCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecCH-HHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 999999999999887665666667899999999999998888899998764 7888888877778888999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee-CCHHHHHHHHccCCcceee
Q 019543 200 VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYFSIT 278 (339)
Q Consensus 200 l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~-~~~~~~~~~~~~L~~~~i~ 278 (339)
+++++.|++++.+|+++++++|+++|.|+.|+||++++||+|+++++++++.|++++|++ ++.+.+.+|+++|+.+.++
T Consensus 237 ~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~~~~~~ 316 (376)
T PRK06460 237 IKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLKLIIPA 316 (376)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCCcceec
Confidence 999999999999999999999999999999999999999999999999999999999999 4567789999999999999
Q ss_pred cccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 279 VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 279 v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+|||+.+|++.+|+.++|+.+++++++..|+++++||+|||+||+||||+||.+||+++
T Consensus 317 ~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 317 QTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGIEDVNDLIEDLDRALSTL 375 (376)
T ss_pred cCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999864
No 39
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=1.7e-57 Score=432.59 Aligned_cols=312 Identities=54% Similarity=0.889 Sum_probs=288.7
Q ss_pred CCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCC
Q 019543 24 GALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGE 94 (339)
Q Consensus 24 ~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD 94 (339)
+++.+|||+|+||.+++.+ ...++.|+|.++|++++||+++++++|++++++|+||++|+.. +.+++++||
T Consensus 1 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd 80 (369)
T cd00614 1 GAVAPPIYQTSTFVFPSPAEAADLFALREGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGD 80 (369)
T ss_pred CCcCCCccCCCceecCCHHHHHHhhcCCcCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCC
Confidence 4789999999999998764 2346899999999999999999999999999999999999986 445889999
Q ss_pred EEEEcCCCccchHHHHH-----------------------------------------------HHHHHHHHHcCCEEEE
Q 019543 95 EIVAGDDLYGGTDRLLS-----------------------------------------------RKIAEMAHAHGALLLV 127 (339)
Q Consensus 95 ~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~la~~~g~~liv 127 (339)
+|+++++.|+++...+. ++|+++|++||+++++
T Consensus 81 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~liv 160 (369)
T cd00614 81 HVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVV 160 (369)
T ss_pred EEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEE
Confidence 99999999988764321 9999999999999999
Q ss_pred eCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHHHHH
Q 019543 128 DNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRV 207 (339)
Q Consensus 128 D~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~~r~ 207 (339)
|++|+.++..+++..++|++++|++|+++|+++.+||++++++++++++++..++.+|+.++|..+++++++|++++.|+
T Consensus 161 D~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~r~ 240 (369)
T cd00614 161 DNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPLRM 240 (369)
T ss_pred ECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHHHH
Confidence 99999998877888899999999999999998889999999875788889888778899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-CHHHHHHHHccCCcceeecccCCccc
Q 019543 208 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKS 286 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-~~~~~~~~~~~L~~~~i~v~~G~~~s 286 (339)
+++.+|+++++++|+++|+|..|+||+++++|+|+++++++.+.|++++|.++ +.+.+.+|+++|+.+.+++|||+++|
T Consensus 241 ~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~s 320 (369)
T cd00614 241 ERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVES 320 (369)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCce
Confidence 99999999999999999999999999999999999999999999999999995 77889999999999999999999999
Q ss_pred ceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 287 LISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 287 ~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
++++|+.++|..+++++++..|+++++||+|||+||.+|||+||.+||+
T Consensus 321 l~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGlE~~~dl~~dl~~al~ 369 (369)
T cd00614 321 LVEHPASMTHSQLPPEERAAAGITPGLVRLSVGIEDVEDLIADLEQALK 369 (369)
T ss_pred eeeCCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999985
No 40
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=8.7e-57 Score=430.02 Aligned_cols=331 Identities=46% Similarity=0.795 Sum_probs=303.7
Q ss_pred CCccceeeccCCCCC-CCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH
Q 019543 7 PGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA 85 (339)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~ 85 (339)
.+++|+++|.+...+ .++++++|||++++|.+++.++..+|.|+|.++|.+++||+++|+++|++++++++||++|+.+
T Consensus 5 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~ 84 (390)
T PRK08064 5 YSIDTLLLHNQYKHDKQTGAVNVPIYHASTFHQFDFDTFGKYDYSRSGNPTREALEDIIAELEGGTKGFAFASGMAAIST 84 (390)
T ss_pred CCcccceeeCCCCCCCCCCCccCCcccCcceecCcccccCCCcccCCCChhHHHHHHHHHHHhCCCCeEEECCHHHHHHH
Confidence 357799999985433 4799999999999999988776677999999999999999999999999999999999999986
Q ss_pred HHHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHHHHH
Q 019543 86 VTHLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIAEMA 118 (339)
Q Consensus 86 il~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~la 118 (339)
++.++++||+|+++++.|++++..+. ++|.++|
T Consensus 85 ~l~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la 164 (390)
T PRK08064 85 AFLLLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLA 164 (390)
T ss_pred HHHHhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHH
Confidence 55678999999999999987653221 9999999
Q ss_pred HHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHh
Q 019543 119 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 198 (339)
Q Consensus 119 ~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~ 198 (339)
+++|+++|+|++++.+....++.+++|++++|+||+++|+++.++|+++++++++.++++..+..+|..++|.+++++++
T Consensus 165 ~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~~ 244 (390)
T PRK08064 165 KAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVLR 244 (390)
T ss_pred HHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence 99999999999999887767777899999999999999998888999988877788888888877899999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceee
Q 019543 199 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSIT 278 (339)
Q Consensus 199 ~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~ 278 (339)
+++++..|++++.+|+..++++|+++|.|..|+||+++++|+|+++++++.+.|++++|.+++.+++.+|+++|+.+.++
T Consensus 245 gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~~ 324 (390)
T PRK08064 245 GLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPVFA 324 (390)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcceEc
Confidence 99999999999999999999999999999999999999999999999999999999999998877889999999999999
Q ss_pred cccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 279 VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 279 v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+|+|+.+|++++|+.++|+.++.+++...|+++++||+|||+||++|+|+||.+||+++
T Consensus 325 ~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 325 VSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred ccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999863
No 41
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=5e-57 Score=433.04 Aligned_cols=329 Identities=39% Similarity=0.648 Sum_probs=297.5
Q ss_pred CccceeeccCCC-CCCCCCccccccccceeeCCCCCC--------CCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCc
Q 019543 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (339)
Q Consensus 8 ~~~~~~~~~~~~-~~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~s 78 (339)
.++|.++|.+.. .+.++++.+|+|.+++|.++...+ ..+|.|+|+.+|.+.+||+++|+++|.+++++++|
T Consensus 8 ~~~t~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~iA~~~g~~~~l~~~s 87 (400)
T PRK06234 8 GFATKAIHGGHIGDKQFGSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGEAAVVAAS 87 (400)
T ss_pred CccchheECCCCCCCCCCCccCCcccccceecCChHHHHHhhccCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEEcC
Confidence 457999999854 445799999999999999987642 35688999999999999999999999999999999
Q ss_pred HHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH----------------------------------------------
Q 019543 79 GMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS---------------------------------------------- 111 (339)
Q Consensus 79 G~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~---------------------------------------------- 111 (339)
|++|+.+ +.++++|||+|+++++.|+.+...+.
T Consensus 88 G~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~~i~~~tklI~iesP~NPtG~v~d 167 (400)
T PRK06234 88 GMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVRNALKANTKVVYLETPANPTLKVTD 167 (400)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHHHHhccCCeEEEEECCCCCCCCcCC
Confidence 9999975 55689999999999998877654321
Q ss_pred -HHHHHHHHHc--CCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH--HHhcCC
Q 019543 112 -RKIAEMAHAH--GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGS 186 (339)
Q Consensus 112 -~~I~~la~~~--g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~--~~~~~~ 186 (339)
++|.++|+++ |+++|+|++|+.+....++..++||+++|+||+++|+++++||++++++ +++++++.. +..+|.
T Consensus 168 l~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~-~~~~~l~~~~~~~~~g~ 246 (400)
T PRK06234 168 IKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKE-EFINQVKLFGIKDMTGS 246 (400)
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecH-HHHHHHHHHHHHHhcCC
Confidence 9999999997 9999999999998877777788999999999999999988899999875 677777653 345789
Q ss_pred CCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-CHHHH
Q 019543 187 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALS 265 (339)
Q Consensus 187 ~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-~~~~~ 265 (339)
.++|..+++++++|++++.|++++++|+++++++|+++|.|..|+||+++++|+|+++++++.+.|++++|.+. +.+.+
T Consensus 247 ~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~ 326 (400)
T PRK06234 247 VIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEG 326 (400)
T ss_pred CCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999994 56778
Q ss_pred HHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 266 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 266 ~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
.+|+++|+.+++++|||+.+|++++|+.++|..+++++++..|+++++||+|||+||++|||+||.+||+++
T Consensus 327 ~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 327 KVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALDLI 398 (400)
T ss_pred HHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999999999999999864
No 42
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=9.7e-57 Score=433.36 Aligned_cols=327 Identities=40% Similarity=0.638 Sum_probs=288.6
Q ss_pred ccceeeccCCCC-CCCCCccccccccceeeCCCCCC--------CCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcH
Q 019543 9 VSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (339)
Q Consensus 9 ~~~~~~~~~~~~-~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG 79 (339)
++|+++|++... ..++++.+|||+++||.+++.++ ..+|.|+|..+|++++||+++|+++|.+.+++++||
T Consensus 2 ~~t~~~~~~~~~~~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~ysr~~~p~~~~le~~lA~l~g~~~~v~~~sG 81 (418)
T TIGR01326 2 FETLQLHAGQEPDPTTGSRAVPIYQTTSYVFDSTEHAAALFGLQEAGNIYSRLMNPTTDVLEQRIAALEGGVAALAVASG 81 (418)
T ss_pred ccceeEECCCCCCCCCCCccCCccCCCCeecCCHHHHHHhhccCcCCceeECCCChhHHHHHHHHHHHhCCCeEEEEccH
Confidence 579999998543 34689999999999999987541 335889999999999999999999999999999999
Q ss_pred HHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------
Q 019543 80 MAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS----------------------------------------------- 111 (339)
Q Consensus 80 ~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~----------------------------------------------- 111 (339)
++|+.. +..++++||+|+++++.|+++...+.
T Consensus 82 ~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl 161 (418)
T TIGR01326 82 QAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFEKAIDENTKAVFAETIGNPAINVPDI 161 (418)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCH
Confidence 999985 45688999999999999987654321
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChh-------------------
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER------------------- 172 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~------------------- 172 (339)
++|+++|++||+++|+|++++.+....++..++|++++|+||+++|+|+++||+++.++.-
T Consensus 162 ~~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a 241 (418)
T TIGR01326 162 EAIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHG 241 (418)
T ss_pred HHHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCcccc
Confidence 9999999999999999999998877777777899999999999999999999888754210
Q ss_pred -----------HHHHHH-HHHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCc
Q 019543 173 -----------LAKELY-FLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 240 (339)
Q Consensus 173 -----------l~~~l~-~~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~ 240 (339)
.+.+.+ ...+..|..++|..++++.++++++..|++++.+|+..++++|.++|+|..|+||++++||+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~~~~ 321 (418)
T TIGR01326 242 LVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLASHPH 321 (418)
T ss_pred chhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCcc
Confidence 001111 22335688889999999999999999999999999999999999999999999999999999
Q ss_pred hHhHhhhc-CCCcceEEEee-CCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe
Q 019543 241 HELHYSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 318 (339)
Q Consensus 241 ~~~~~~~~-~~~~~ivs~~~-~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv 318 (339)
|+++++++ .|.|++++|++ ++.+.+.+|+++|+.+..++|||+.+|++++|+.++|+.++++++++.|+++++|||||
T Consensus 322 ~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~sv 401 (418)
T TIGR01326 322 HALAKKYLPKGFGAVLSFEIKGGREAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIRLSV 401 (418)
T ss_pred HHHHHHhccCCCcceEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEe
Confidence 99999998 68999999998 56677899999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHh
Q 019543 319 GIEDVNDLISDLDKALR 335 (339)
Q Consensus 319 g~e~~~~li~~l~~al~ 335 (339)
|+||++|||+||.+||+
T Consensus 402 GlE~~~dl~~dl~~Al~ 418 (418)
T TIGR01326 402 GIENIDDIIADLEQALE 418 (418)
T ss_pred cCCCHHHHHHHHHHhhC
Confidence 99999999999999985
No 43
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.3e-56 Score=428.91 Aligned_cols=326 Identities=28% Similarity=0.442 Sum_probs=293.0
Q ss_pred CCCCccceeeccCCC-CCCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEE
Q 019543 5 EEPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALC 75 (339)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~ 75 (339)
+.++++|+++|.+.. .+.++++.+|||+|+||.|++.+ +..+|.|+|.++|++++||+++++++|++++++
T Consensus 6 ~~~~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~ 85 (394)
T PRK07050 6 PKRALQTRIVQPDDQIPPGFRSFVTPVARASTVVFPDLATMRALDWRQDVQWRYGLHATPTSLALAQRLAEIEGGRHALL 85 (394)
T ss_pred CCCCccchheECCCCCCCCCCCccCCeeCCcceecCCHHHHHhhcccccCCcccCCCCCHHHHHHHHHHHHHhCCCeEEE
Confidence 457888999999854 34579999999999999998764 234689999999999999999999999999999
Q ss_pred cCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH-------------------------------------------
Q 019543 76 FTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS------------------------------------------- 111 (339)
Q Consensus 76 ~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~------------------------------------------- 111 (339)
++||++|+.+ +.++++|||+|+++++.|+++..++.
T Consensus 86 ~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~~~i~~~tklV~le~p~Np~~~ 165 (394)
T PRK07050 86 QPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIADLIQPNTRLIWLEAPGSVTME 165 (394)
T ss_pred eccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCcc
Confidence 9999999985 44689999999999999987654221
Q ss_pred ----HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCC
Q 019543 112 ----RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 187 (339)
Q Consensus 112 ----~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~ 187 (339)
++|+++|+++|+++++|++|++|...+++..|+|++++|++|+++|+++++||+++++++++.++++.++...|..
T Consensus 166 ~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~ 245 (394)
T PRK07050 166 VPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIG 245 (394)
T ss_pred HhhHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 8999999999999999999999988888888999999999999999998889999988778889998888888999
Q ss_pred CChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC---CHHH
Q 019543 188 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG---SLAL 264 (339)
Q Consensus 188 ~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~---~~~~ 264 (339)
++|.++++++++|+++..|++++++|+.+++++|+++|.|..|+||+++++|+|+++++++.+.|++++|++. +.++
T Consensus 246 ~~~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~ 325 (394)
T PRK07050 246 VSADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQ 325 (394)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998889999999984 3577
Q ss_pred HHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 265 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 265 ~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+.+|+++|+.+++++|||+.+|++. |+.++|...+ ..++.+++||||||+||++|||+||.+||++
T Consensus 326 ~~~~~~~l~~~~~~~s~G~~~sl~~-~~~~~~~~~~-----~~~~~~~~iR~svGlE~~~dl~~dl~~al~~ 391 (394)
T PRK07050 326 VDAFVEALELFAIGWSWGGACSLAM-PYDVASMRTA-----KWPHRGTLVRLYIGLEDEADLIADLEQALEA 391 (394)
T ss_pred HHHHHHcCCCCeeccccCCccceEe-eCcccccchh-----hcCCCCCEEEEEeCcCCHHHHHHHHHHHHHH
Confidence 8999999999999999999999997 8777777653 2336679999999999999999999999986
No 44
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=2.9e-55 Score=421.84 Aligned_cols=329 Identities=29% Similarity=0.448 Sum_probs=290.7
Q ss_pred CCccceeeccCCCCCCCCCccccccccceeeCCCCC--------CC----CCCcccCCCCchHHHHHHHHHhHhCCCeEE
Q 019543 7 PGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------EN----GPYDYTRSGNPTRDALESLLAKLDKADRAL 74 (339)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~--------~~----~~~~y~r~~~~~~~~le~~la~~~g~~~~l 74 (339)
-+++++++|.+...++++++.||||+|+||.+++.+ +. .+|.|+|.++|++++||+++|+++|++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~lA~l~g~~~~l 95 (418)
T PLN02242 16 EDPAAALASARHEFGEHGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQMAALEGTEAAY 95 (418)
T ss_pred CChHHHHhcCCCCCCCCCCccCCcccCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHHHHHHhCCCeEE
Confidence 345688999988776668889999999999998753 11 348999999999999999999999999999
Q ss_pred EcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH------------------------------------------
Q 019543 75 CFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS------------------------------------------ 111 (339)
Q Consensus 75 ~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~------------------------------------------ 111 (339)
+++||++|+.+ +.++++|||+|+++++.|+++...+.
T Consensus 96 ~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~NP 175 (418)
T PLN02242 96 CTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESISNP 175 (418)
T ss_pred EEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCCCC
Confidence 99999999985 55689999999999998877654321
Q ss_pred -------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH--
Q 019543 112 -------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-- 182 (339)
Q Consensus 112 -------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~-- 182 (339)
++|+++|++||++||+|++|+.. ..++...++||+++|+||+++|+++++||++++++ ++++.++..+.
T Consensus 176 tG~v~dl~~I~~la~~~gi~livDea~~~~-~~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~-~li~~l~~~~~~~ 253 (418)
T PLN02242 176 TLTVADIPELARIAHEKGVTVVVDNTFAPM-VLSPARLGADVVVHSISKFISGGADIIAGAVCGPA-ELVNSMMDLHHGA 253 (418)
T ss_pred CCcccCHHHHHHHHHHhCCEEEEECCCCcc-CCCHHHcCCcEEEEeCccccCCCCCceEEEEEcCH-HHHHHHHHHhhhh
Confidence 99999999999999999999643 34566678999999999999999988899998764 67787776633
Q ss_pred --hcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhc---CCCcceEEE
Q 019543 183 --AEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA---KGAGSVLSF 257 (339)
Q Consensus 183 --~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~---~~~~~ivs~ 257 (339)
..|..+++..++++.++++++..|++++++|+++++++|++++ + .|.||++++||+|+++++++ .|.|++++|
T Consensus 254 ~~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~-~-~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf 331 (418)
T PLN02242 254 LMLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG-L-KVIYPGLEDHPQHALLKSMANKGYGFGGLLCL 331 (418)
T ss_pred hhccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC-C-EEECCCCCCCccHHHHHHhcccCCCceeEEEE
Confidence 4577889999999999999999999999999999999999995 3 78999999999999999998 589999999
Q ss_pred eeCCHHHHHHHHccCCcc----eeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCC-HHHHHHHHHH
Q 019543 258 LTGSLALSKHVVETTKYF----SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED-VNDLISDLDK 332 (339)
Q Consensus 258 ~~~~~~~~~~~~~~L~~~----~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~-~~~li~~l~~ 332 (339)
++++.+.+.+|+++|+.+ .+++|||+.+|++++|+.++|..++.++++..|+++++||||+|+|+ .+|||+||.+
T Consensus 332 ~l~~~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~~dli~dl~~ 411 (418)
T PLN02242 332 DMDTEERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYTGTLEQRWSQFEK 411 (418)
T ss_pred EECCHHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCCCCHHHHHHHHHH
Confidence 998888899999999976 88999999999999999999999999999999999999999999995 9999999999
Q ss_pred HHhcCCC
Q 019543 333 ALRTGPL 339 (339)
Q Consensus 333 al~~~~~ 339 (339)
||+++.+
T Consensus 412 al~~~~~ 418 (418)
T PLN02242 412 ALSAMKL 418 (418)
T ss_pred HHHHhhC
Confidence 9998643
No 45
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=5.1e-54 Score=407.86 Aligned_cols=318 Identities=36% Similarity=0.539 Sum_probs=281.7
Q ss_pred CccceeeccCCC-CCCCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-
Q 019543 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA- 85 (339)
Q Consensus 8 ~~~~~~~~~~~~-~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~- 85 (339)
.++|+++|.+.. .+.++++.+|||+|+||.|++..+..+|.|+|+.+|..++||+++|+++ .+++++++||++|+.+
T Consensus 3 ~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~ry~~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~ 81 (366)
T PRK07582 3 GDGTRSVHAGGPEAVPGEPVLPGPVFAAPYHLSPGEPTGPDTYGRASNPTWRALEAALGELE-GAEALVFPSGMAAITAV 81 (366)
T ss_pred CcccceeeCCCCCCCCCCCccCCccccceEEccCccccCCceeECCCCccHHHHHHHHHHHc-CCCEEEECCHHHHHHHH
Confidence 467999999854 4447999999999999999865445678899999999999999999999 6889999999999985
Q ss_pred HHHhcCCCCEEEEcCCCccchHHHHH--------------------------------------------HHHHHHHHHc
Q 019543 86 VTHLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------------RKIAEMAHAH 121 (339)
Q Consensus 86 il~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------------~~I~~la~~~ 121 (339)
+.++++|||+|+++++.|+++..++. ++|+++|+++
T Consensus 82 l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~ 161 (366)
T PRK07582 82 LRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAEAALAGADLVLAETPSNPGLDVCDLAALAAAAHAA 161 (366)
T ss_pred HHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHHHhccCceEEEEECCCCCCCCccCHHHHHHHHHHc
Confidence 44689999999999999977654321 9999999999
Q ss_pred CCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh
Q 019543 122 GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 201 (339)
Q Consensus 122 g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~ 201 (339)
|+++++|++|+.+....++.+++|++++|+||+++|+++.++|+++++++++.++++.++...|..++|+.+++++++|+
T Consensus 162 g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~ 241 (366)
T PRK07582 162 GALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLG 241 (366)
T ss_pred CCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccc
Confidence 99999999998765556777889999999999999998888999998766788888888888889999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeeccc
Q 019543 202 TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSF 281 (339)
Q Consensus 202 ~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~ 281 (339)
+++.|++++++|++.++++|+++|.|..|+||++++||+|+++++++.+.|++++|.+++.+++.+|+++++.+.+++||
T Consensus 242 tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l~~~~~~~s~ 321 (366)
T PRK07582 242 TLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAASRLVVAATSF 321 (366)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhCCcceecccC
Confidence 99999999999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred CCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 282 GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 282 G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
|+.+|++.++... ..++++++||+|||+||++|||+||.+||+++
T Consensus 322 G~~~sl~~~~~~~-----------~~~~~~~liR~svGlE~~~dli~dl~~al~~~ 366 (366)
T PRK07582 322 GGVHTSADRRARW-----------GDAVPEGFVRLSCGIEDTDDLVADLERALDAL 366 (366)
T ss_pred CCccchhhhHHHc-----------CCCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 9999987443211 12267899999999999999999999999864
No 46
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=7e-54 Score=409.84 Aligned_cols=319 Identities=34% Similarity=0.549 Sum_probs=282.9
Q ss_pred eeeccCCCCCCCCCccccccccceeeCCCCCC--------CCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHH
Q 019543 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAAL 83 (339)
Q Consensus 12 ~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~ 83 (339)
.++|++...+.++++.+|||+|+||.|++.++ ..+|.|+|..+|++++||+++|+++|++++++|+||++|+
T Consensus 12 ~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai 91 (389)
T PRK05968 12 ALITAHDEGNAFDAVVPPIFQTSLFTFDSYDEMEDVYAGEKVRPIYSRGDNPTVRAFEEMLAKLEGAEDARGFASGMAAI 91 (389)
T ss_pred heeecCCCccCCCCccCCccCCcceecCCHHHHHHhhcCCCCCccccCCCChhHHHHHHHHHHHhCCCcEEEECCHHHHH
Confidence 36788777778999999999999999987542 3458999999999999999999999999999999999999
Q ss_pred HH-HHHhcCCCCEEEEcCCCccchHHHHH----------------------------------------------HHHHH
Q 019543 84 AA-VTHLLGTGEEIVAGDDLYGGTDRLLS----------------------------------------------RKIAE 116 (339)
Q Consensus 84 ~~-il~ll~~GD~Vi~~~~~y~~~~~~~~----------------------------------------------~~I~~ 116 (339)
.+ +..+++|||+|+++.+.|+++...+. ++|++
T Consensus 92 ~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~tklV~ie~pt~~~~~~~dl~~i~~ 171 (389)
T PRK05968 92 SSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKALPGAKLLYLESPTSWVFELQDVAALAA 171 (389)
T ss_pred HHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhcccCCEEEEECCCCCCCcHHHHHHHHH
Confidence 75 55688999999999999987653221 89999
Q ss_pred HHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH-hcCCCCChHHHHH
Q 019543 117 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEGSGLAPFDCWI 195 (339)
Q Consensus 117 la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~-~~~~~~~~~~a~~ 195 (339)
+|++||+++++|++|+.+...+++..++|++++|++|+++|+++.+||+++.++ +++++++..+. ..|..+++..+++
T Consensus 172 la~~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~-~~~~~l~~~~~~~~g~~~~~~~A~~ 250 (389)
T PRK05968 172 LAKRHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSK-EHIARINAEAYPYLGAKLSPFEAWL 250 (389)
T ss_pred HHHHcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECH-HHHHHHHHHHHHhCCCCCChHHHHH
Confidence 999999999999999998877788889999999999999999888899988764 67777776543 5688899999999
Q ss_pred HHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcc
Q 019543 196 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF 275 (339)
Q Consensus 196 ~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~ 275 (339)
++++|+++..|++++++++++++++|+++|+|+.|.||++++||. +++.+++++++|.+++...+.+|+++|+.+
T Consensus 251 ~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~-----~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~ 325 (389)
T PRK05968 251 LLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPP-----AGLSGTSGLFSFIFREGIDVRAFADALKLF 325 (389)
T ss_pred HHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChH-----HhCCCCceEEEEEECCHHHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999999998883 345678999999997555788999999999
Q ss_pred eeecccCCcccceeccccccCCC-CCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 276 SITVSFGSVKSLISMPCFMSHAS-IPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 276 ~i~v~~G~~~s~~~~p~~~~h~~-~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
++++|+|+.+|+++ |+.++|.. .+.++++..|+++++||+|||+||++|||+||.+||++.
T Consensus 326 ~~~~s~G~~~slv~-p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 326 RLGVSWGGHESLVV-PAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAAA 387 (389)
T ss_pred EEecCCCCCCceee-eCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHh
Confidence 99999999999998 99899888 457889999999999999999999999999999999864
No 47
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=3.2e-53 Score=402.63 Aligned_cols=315 Identities=43% Similarity=0.754 Sum_probs=284.7
Q ss_pred CCccceeeccCCCC-CCCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH
Q 019543 7 PGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA 85 (339)
Q Consensus 7 ~~~~~~~~~~~~~~-~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~ 85 (339)
++++|+++|.+... +.++++.||||+||||.+++..+..+|.|+|.++|++++||+++|+++|++.+++++||++|+.+
T Consensus 3 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~ 82 (366)
T PRK08247 3 STIETKLAQIGNRSDERTGTVNPPVYFSTAYRHEGIGESTGFDYSRTGNPTRGVLEQAIADLEGGDQGFACSSGMAAIQL 82 (366)
T ss_pred CCcchhheeCCCCCCCCCCCccCCcccCcccccCCCCCcCCccccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHH
Confidence 46789999998543 34799999999999999877555567999999999999999999999999999999999999987
Q ss_pred HHHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHHHHH
Q 019543 86 VTHLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIAEMA 118 (339)
Q Consensus 86 il~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~la 118 (339)
++.+++|||+|+++++.|+++..++. ++|+++|
T Consensus 83 ~~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la 162 (366)
T PRK08247 83 VMSLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIA 162 (366)
T ss_pred HHHHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHH
Confidence 77788999999999999998644322 9999999
Q ss_pred HHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHh
Q 019543 119 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 198 (339)
Q Consensus 119 ~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~ 198 (339)
++||+++|+|++++.+....++..++||+++|+||+++|+++.++|+++++++.+.+.++..+...+..++|..++++.+
T Consensus 163 ~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~ 242 (366)
T PRK08247 163 KKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIR 242 (366)
T ss_pred HHcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHh
Confidence 99999999999999888777777789999999999999998889999998766788888877777788899999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceee
Q 019543 199 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSIT 278 (339)
Q Consensus 199 ~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~ 278 (339)
+|+++..|++++++|++.++++|+++|+|..|.||+ .|++++|.+.+.+.+.+|.+.|+.+.++
T Consensus 243 ~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~----------------~gg~~sf~~~~~~~~~~~~~~l~~~~~~ 306 (366)
T PRK08247 243 GMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPG----------------RGGMLSFRLQDEEWVNPFLKSLKLITFA 306 (366)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCC----------------cCcEEEEEECCHHHHHHHHHcCCcceEc
Confidence 999999999999999999999999999999999885 4789999987777778999999999999
Q ss_pred cccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 279 VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 279 v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+|+|+..+++.+|+.++|+.++++.|...|++++++|||+|+||.+|||+||.+||+++
T Consensus 307 ~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGlE~~~dl~~dl~~al~~~ 365 (366)
T PRK08247 307 ESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGIENVEDLIADLKQAFKQV 365 (366)
T ss_pred cCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999864
No 48
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.96 E-value=2.5e-28 Score=229.60 Aligned_cols=247 Identities=24% Similarity=0.224 Sum_probs=190.1
Q ss_pred CcccCC---CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCcc----chH-----------
Q 019543 47 YDYTRS---GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYG----GTD----------- 107 (339)
Q Consensus 47 ~~y~r~---~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~----~~~----------- 107 (339)
...+|. ..+.+.+||++||+|+|.|++++|+||+.||..++ +++++||.|+.+...+- |..
T Consensus 73 ~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H 152 (388)
T COG0156 73 AGGSRLISGTSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH 152 (388)
T ss_pred CCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC
Confidence 345663 55889999999999999999999999999998655 58999998887654321 111
Q ss_pred -------HHHH---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---cc------c-CC
Q 019543 108 -------RLLS---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---PL------E-LG 143 (339)
Q Consensus 108 -------~~~~---------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~~------~-~~ 143 (339)
..++ ++|+++|++||++|+|||+|+.|++++ .+ . ..
T Consensus 153 nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~ 232 (388)
T COG0156 153 NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEE 232 (388)
T ss_pred CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCcc
Confidence 1110 999999999999999999999998753 21 1 23
Q ss_pred CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHH
Q 019543 144 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIA 218 (339)
Q Consensus 144 ~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~ 218 (339)
.||+++||+|+|| ..||+++++ ..+++.+++..+ +|++.++|..++.+...++ ..++++++++++..++.
T Consensus 233 vdi~~gTlsKAlG----s~Gg~v~g~-~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~ 307 (388)
T COG0156 233 VDIIVGTLGKALG----SSGGYIAGS-AALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFR 307 (388)
T ss_pred ceEEEEEchhhhc----ccCceeeCc-HHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 4899999999999 458899886 478999988644 6799999998776655554 45688888899998888
Q ss_pred HHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCC
Q 019543 219 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHAS 298 (339)
Q Consensus 219 ~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~ 298 (339)
..++... ++. ..+.++|+++.++++..+.++.+.|...|+.++. +.+|.+
T Consensus 308 ~~~~~~~------~~~-------------~~s~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~------i~~PTV----- 357 (388)
T COG0156 308 SLLKALG------LVL-------------LPSESPIIPVILGDEERALEASRALLEEGIYVSA------IRPPTV----- 357 (388)
T ss_pred HHHHhcC------Ccc-------------CCCCCCeeeeEeCCHHHHHHHHHHHHHCCeeEee------ecCCCC-----
Confidence 6665432 111 1236899999999999999999998776776652 445644
Q ss_pred CCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 299 IPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 299 ~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
| ....+||+++...|+++.|+.+.++|.+.
T Consensus 358 -p--------~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 358 -P--------KGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred -C--------CCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 1 14578999999999999999999999764
No 49
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=4.4e-25 Score=206.29 Aligned_cols=264 Identities=20% Similarity=0.226 Sum_probs=190.5
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH--hcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH--LLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~--ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.+|.+++||+.++++.|+++++.++||++|+.+.+. -++|||+||+++.+|.++.+.+-
T Consensus 32 ~G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid 111 (374)
T COG0399 32 GGPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNID 111 (374)
T ss_pred cChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCC
Confidence 378999999999999999999999999999986443 47999999999999988765432
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc--CcccCCCeEEEecc--ccccccCCC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLS--RPLELGADIVMHSA--TKFIAGHSD 160 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~--~~~~~~~Di~~~S~--sK~l~g~~~ 160 (339)
++|.++|++||++||+|.+|+.|... +..+.-.|+.++|| +|.++.
T Consensus 112 ~~~ie~aIt~~tKAIipVhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~itt--- 188 (374)
T COG0399 112 PDLIEAAITPRTKAIIPVHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTT--- 188 (374)
T ss_pred HHHHHHHcccCCeEEEEehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCCCccc---
Confidence 99999999999999999999998654 33443459999998 799983
Q ss_pred ceEEEEEEcChhHHHHHHHHHHh----------------cCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC
Q 019543 161 VMAGVLAVKGERLAKELYFLQNA----------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~----------------~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
..||++++++++++++++.++.. +...|+.+.|++++.+|+.+++..++++++++.+.+.|+++
T Consensus 189 gEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~ 268 (374)
T COG0399 189 GEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGL 268 (374)
T ss_pred cCceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 37999999999999999877641 23567888999999999999999999999999999999998
Q ss_pred CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCCcceeecccCCcccceeccccccC-----CC
Q 019543 225 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH-----AS 298 (339)
Q Consensus 225 ~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h-----~~ 298 (339)
+++. .|..+... .+...++++.+.+. ....++.+.|++.|++ ....+..+..+|+...- ..
T Consensus 269 ~~~~---~p~~~~~~---------~~~~~~~~i~~~~~~~~R~~l~~~L~~~gi~-~~~~~~P~~~~~~~~~~~~~~~~~ 335 (374)
T COG0399 269 PGIT---LPPEPDGA---------VHAWHLYTILVDEEGISRDALMESLKEAGVG-AVVYFRPLHLQPAYRQLGYFPEGD 335 (374)
T ss_pred CCcc---ccCCCCCc---------eeeeeeeEEEecCCCCCHHHHHHHHHhCCCC-ceEEeeccccchhhhcccccccCC
Confidence 7643 23211111 12345777777543 4456788888887776 22333223222221111 12
Q ss_pred CCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 299 IPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 299 ~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+|. ...+..+.+++=+...=.++.++++.++|++
T Consensus 336 lp~----ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~ 369 (374)
T COG0399 336 LPN----AEDLSERILSLPLHPNLSEEDVDRVIEALKE 369 (374)
T ss_pred Cch----HHHHhhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 221 1112345677766655455555566655543
No 50
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.93 E-value=8.2e-25 Score=210.40 Aligned_cols=233 Identities=17% Similarity=0.162 Sum_probs=175.0
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-h--------------cCCCCEEEEcCCCcc----chH-------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-L--------------LGTGEEIVAGDDLYG----GTD------- 107 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-l--------------l~~GD~Vi~~~~~y~----~~~------- 107 (339)
.+.+++||++||+++|.|++++|+||+.||.+++. + .+.+|.|+++...+. |..
T Consensus 146 ~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~ 225 (476)
T PLN02955 146 TTYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGN 225 (476)
T ss_pred hHHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCC
Confidence 36789999999999999999999999999986554 3 246777887664332 221
Q ss_pred ---------------HHHH------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c------
Q 019543 108 ---------------RLLS------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P------ 139 (339)
Q Consensus 108 ---------------~~~~------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~------ 139 (339)
..++ ++|.++|++||+.||+||+|+.|+.+. +
T Consensus 226 a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g 305 (476)
T PLN02955 226 VEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFN 305 (476)
T ss_pred ceEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhC
Confidence 1111 999999999999999999999887643 1
Q ss_pred ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhhH---HHHHHHHHHHH
Q 019543 140 LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNA 214 (339)
Q Consensus 140 ~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a 214 (339)
+....||+++||+|++| ..||++++++ ++++.+++..+ ++++.++|..++.++.+++.+ +.+++++++|.
T Consensus 306 ~~~di~ii~~TLsKA~G----~~GGfi~gs~-~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~ 380 (476)
T PLN02955 306 CEADVDLCVGTLSKAAG----CHGGFIACSK-KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERV 380 (476)
T ss_pred CCCCCcEEEEeCccchh----ccCceeecHH-HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 12246899999999998 4579998875 67788876544 467888887766665555443 56777888888
Q ss_pred HHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccc
Q 019543 215 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 215 ~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~ 294 (339)
+++.+.+ ++ + -.++|+++.++++..+.++.+.|...|+.++. +.+|.+.
T Consensus 381 ~~fr~~~----G~-----~----------------~~sPI~pI~ig~~~~a~~~~~~L~~~Gi~v~~------i~yPtVP 429 (476)
T PLN02955 381 KEFKALS----GV-----D----------------ISSPIISLVVGNQEKALKASRYLLKSGFHVMA------IRPPTVP 429 (476)
T ss_pred HHHHHhc----CC-----C----------------CCCCEEEEEeCCHHHHHHHHHHHHHCCCEEEE------ECCCCCC
Confidence 8877631 11 1 03689999999999999999999888877663 4566541
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
....+|||++...|+++.|+.+.++|++
T Consensus 430 --------------~g~~rLRi~lsA~Ht~edId~lv~~L~~ 457 (476)
T PLN02955 430 --------------PNSCRLRVTLSAAHTTEDVKKLITALSS 457 (476)
T ss_pred --------------CCCceEEEeeCCCCCHHHHHHHHHHHHH
Confidence 1346899999999999999999998864
No 51
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.92 E-value=1.4e-23 Score=201.29 Aligned_cols=254 Identities=13% Similarity=0.152 Sum_probs=175.0
Q ss_pred ccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHH------------------
Q 019543 49 YTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRL------------------ 109 (339)
Q Consensus 49 y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~------------------ 109 (339)
|+|. +.+++||+++|+++|.+++++|+||++|+.. +.++++|||+|+++++.|.++...
T Consensus 39 yg~~--~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~~~ 116 (392)
T PLN03227 39 YGTI--DAHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDMKD 116 (392)
T ss_pred cCCh--HHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCHHH
Confidence 5543 4899999999999999999999999999875 556899999999998866543210
Q ss_pred -------H-------------H-------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc---------c-
Q 019543 110 -------L-------------S-------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP---------L- 140 (339)
Q Consensus 110 -------~-------------~-------------------~~I~~la~~~g~~livD~a~a~g~~~~~---------~- 140 (339)
+ + ++|.++|++||+++|+||+|++|..++. +
T Consensus 117 l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~ 196 (392)
T PLN03227 117 LRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLK 196 (392)
T ss_pred HHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCC
Confidence 0 1 8999999999999999999987755321 1
Q ss_pred -cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH--HhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHH
Q 019543 141 -ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNA 214 (339)
Q Consensus 141 -~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~--~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a 214 (339)
..++|++++|+||+++ ..||++++++ ++++.++... ..++..++|..++.+...+.. .+.++++.+++.
T Consensus 197 p~~~~Div~~slsk~~g----~~gg~v~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~ 271 (392)
T PLN03227 197 PMVHAEIVTFSLENAFG----SVGGMTVGSE-EVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSI 271 (392)
T ss_pred CCCCceEEEeechhhhh----ccCcEEecCH-HHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 2367999999999987 4578887764 6666665432 235666778766655544433 356788888999
Q ss_pred HHHHHHHhC--CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHH---------HHHHccCCcceeeccc-C
Q 019543 215 QKIAEFLAS--HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS---------KHVVETTKYFSITVSF-G 282 (339)
Q Consensus 215 ~~l~~~L~~--~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~---------~~~~~~L~~~~i~v~~-G 282 (339)
+++.+.|+. ++.+..+.. ++... ....++|++|.+++...+ .++.+.+.+.|+.+.. |
T Consensus 272 ~~l~~~L~~~~~~~~~~~rg-~~~~~---------~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~ 341 (392)
T PLN03227 272 ANLYSTLTNSSHPYALKLRN-RLVIT---------SDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTG 341 (392)
T ss_pred HHHHHHHHhcCCcccccccc-ccccC---------CCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecc
Confidence 999999974 222222211 11000 123578999999764332 3777777777776642 2
Q ss_pred CcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 283 SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 283 ~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.. .....|. +++..||+++...++++.|+.+.++|++
T Consensus 342 ~~-~~~~~~~----------------~P~~~iR~~~~~~~t~eei~~~~~~l~~ 378 (392)
T PLN03227 342 GH-VKKFLQL----------------VPPPCLRVVANASHTREDIDKLLTVLGE 378 (392)
T ss_pred cc-cCCcCCC----------------CCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 11 1111121 2457899999999998888888777764
No 52
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.91 E-value=1.8e-23 Score=198.62 Aligned_cols=264 Identities=22% Similarity=0.250 Sum_probs=191.8
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH--hcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTH--LLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~--ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
++.+++||+++++++|.++++.++||++|+.+.+. -+++||+|+++..++.++...+.
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~ 103 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDP 103 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-H
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCH
Confidence 78999999999999999999999999999986554 36799999999999988765443
Q ss_pred --------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc--CcccCCCeEEEecc--ccccccCCCc
Q 019543 112 --------------------------RKIAEMAHAHGALLLVDNSIMSPVLS--RPLELGADIVMHSA--TKFIAGHSDV 161 (339)
Q Consensus 112 --------------------------~~I~~la~~~g~~livD~a~a~g~~~--~~~~~~~Di~~~S~--sK~l~g~~~~ 161 (339)
++|.++|++||++||+|.+|+.|... +..+...|+.++|| +|.++. .
T Consensus 104 ~~~~~~i~~~t~ai~~~h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~K~i~~---g 180 (363)
T PF01041_consen 104 EALEKAITPKTKAILVVHLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHPTKIITT---G 180 (363)
T ss_dssp HHHHHHHHTTEEEEEEE-GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESSTTSSS-S---S
T ss_pred HHHHHHhccCccEEEEecCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCCCCCCcC---C
Confidence 99999999999999999999998643 34444459999998 699963 3
Q ss_pred eEEEEEEcChhHHHHHHHHHHh-----------------cCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC
Q 019543 162 MAGVLAVKGERLAKELYFLQNA-----------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~~~~~-----------------~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
.||+|+++++++.++++.+++. +...|+++.|++++.+|+.++.+.++++++++++.+.|++.
T Consensus 181 eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~ 260 (363)
T PF01041_consen 181 EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAGI 260 (363)
T ss_dssp S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTG
T ss_pred CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 5899999998999998876531 12568899999999999999999999999999999999999
Q ss_pred CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccCCcceeecccCCcccceeccccccC-----C
Q 019543 225 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH-----A 297 (339)
Q Consensus 225 ~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h-----~ 297 (339)
+++.....|.... ......+++.+.+. ....++.+.|+..||.++......+..+|....+ .
T Consensus 261 ~~~~~~~~~~~~~-----------~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~ 329 (363)
T PF01041_consen 261 PGIKPPPIPDGAE-----------RSSYYRFPIRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPG 329 (363)
T ss_dssp TTEEEEGCGTTTE-----------EBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETS
T ss_pred CCccccccccccc-----------ccccccccccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccC
Confidence 9876544332111 01345677777543 2356788888888988886553333333432111 1
Q ss_pred CCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 298 SIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 298 ~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.+|. ..-+.+..|.+-+...-.++.++.+.++++
T Consensus 330 ~~P~----ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 330 DLPN----AERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp SSHH----HHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred CCHH----HHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 1221 111234567787777667777888888764
No 53
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.91 E-value=9.8e-23 Score=196.75 Aligned_cols=252 Identities=21% Similarity=0.156 Sum_probs=168.2
Q ss_pred CCCcccCC--CCchHHHHHH----HHHhHhCCCeEEE-cCcHHHHHHH-HHHhcCCCCEEEEcCCCccchH---------
Q 019543 45 GPYDYTRS--GNPTRDALES----LLAKLDKADRALC-FTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTD--------- 107 (339)
Q Consensus 45 ~~~~y~r~--~~~~~~~le~----~la~~~g~~~~l~-~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~--------- 107 (339)
.++.++|. ++|.+++||+ ++++++|.+++++ ++||++|+.+ +.++++|||+|++++..|.+..
T Consensus 58 ~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~ 137 (416)
T PRK13034 58 EGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLS 137 (416)
T ss_pred CCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceec
Confidence 45677786 6799999999 9999999999976 5899999985 5568999999999876554410
Q ss_pred ------------------------HHHH--------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcc---
Q 019543 108 ------------------------RLLS--------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPL--- 140 (339)
Q Consensus 108 ------------------------~~~~--------------------~~I~~la~~~g~~livD~a~a~g~~~~~~--- 140 (339)
..+. ++|.++|++||++|++|+||+.|....+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~ 217 (416)
T PRK13034 138 GKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPN 217 (416)
T ss_pred cceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCC
Confidence 0110 89999999999999999999988764322
Q ss_pred c-CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC---CCCChHHHHHHHhchhh----HHHHHHHHHH
Q 019543 141 E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG---SGLAPFDCWICLRGVKT----MALRVEKQQD 212 (339)
Q Consensus 141 ~-~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~---~~~~~~~a~~~~~~l~~----~~~r~~~~~~ 212 (339)
. .++|++++|++|+++|+. ||+++++++.+.++++... +.+ ...++..++++...++. ..++.++.++
T Consensus 218 ~~~~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~ 293 (416)
T PRK13034 218 PFPHAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKINSAV-FPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIA 293 (416)
T ss_pred CCCCceEEEEeCcccCCCCC---CeEEEECcHHHHHHHHhhc-CCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence 1 257999999999997653 7888887755555554432 222 23344444433333332 2345788889
Q ss_pred HHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHH-HHHHHHccCCcceeeccc-CCcccceec
Q 019543 213 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA-LSKHVVETTKYFSITVSF-GSVKSLISM 290 (339)
Q Consensus 213 ~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~-~~~~~~~~L~~~~i~v~~-G~~~s~~~~ 290 (339)
|++++++.|++. ++..+. + .+.++++++.+++.. ....+.+.|+..|+.++. +... -+..
T Consensus 294 ~a~~l~~~L~~~-G~~~~~-~---------------~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~-~~~~ 355 (416)
T PRK13034 294 NAQALAEVLKER-GYDLVS-G---------------GTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPG-DTES 355 (416)
T ss_pred HHHHHHHHHHHc-CCEecc-C---------------CCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCC-CCcC
Confidence 999999999876 543221 1 124678888886543 334455677777776652 1000 0111
Q ss_pred cccccCCCCCHHHHHhCCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Q 019543 291 PCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 335 (339)
Q Consensus 291 p~~~~h~~~~~~~~~~~g~~~~~lRisvg~----e~~~~li~~l~~al~ 335 (339)
|. .+..||+|+.. .+.++.++.+.++|+
T Consensus 356 p~-----------------~~~~lR~~~~~~t~~~~~~~di~~l~~~l~ 387 (416)
T PRK13034 356 PF-----------------VTSGIRIGTPAGTTRGFGEAEFREIANWIL 387 (416)
T ss_pred CC-----------------CCCeeEeCcHHHHhCCCCHHHHHHHHHHHH
Confidence 21 24679999887 444555556655554
No 54
>PLN02483 serine palmitoyltransferase
Probab=99.90 E-value=3.3e-22 Score=196.48 Aligned_cols=240 Identities=16% Similarity=0.153 Sum_probs=168.9
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
..+.+++||+++|+++|.+++++|++|++++.+ +.++++|||+|+++++.|......++
T Consensus 144 ~~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~d~~~le~~ 223 (489)
T PLN02483 144 TTKLHRELEELVARFVGKPAAIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEV 223 (489)
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCCCHHHHHHH
Confidence 357899999999999999999999999999875 44589999999999886654321110
Q ss_pred ------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---------cc-cCCCe
Q 019543 112 ------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---------PL-ELGAD 145 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---------~~-~~~~D 145 (339)
++|+++|++||++||+||+|+.|..+. .. ..+.|
T Consensus 224 l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~d 303 (489)
T PLN02483 224 LREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVD 303 (489)
T ss_pred HHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCc
Confidence 789999999999999999998665321 11 23568
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhh---------HHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKT---------MALRVEKQQDNA 214 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~---------~~~r~~~~~~~a 214 (339)
|+++||||++++ .||++++++ ++++.++.... .++..++|..+..+...|+. ..+++++.+++.
T Consensus 304 I~~~SfSKs~g~----~GG~i~~~~-~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~ 378 (489)
T PLN02483 304 IMMGTFTKSFGS----CGGYIAGSK-ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENS 378 (489)
T ss_pred EEEEecchhccc----CceEEEcCH-HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHH
Confidence 999999999985 368998764 78888876532 23455565544444444432 235677888999
Q ss_pred HHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccc
Q 019543 215 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 215 ~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~ 294 (339)
+++.+.|+++ ++. +..+ ..++++++.+.......+|++.|.+.|+.+...+ .|+.
T Consensus 379 ~~l~~~L~~~-G~~-v~~~----------------~~sp~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~------fp~~- 433 (489)
T PLN02483 379 NFFRSELQKM-GFE-VLGD----------------NDSPVMPIMLYNPAKIPAFSRECLKQNVAVVVVG------FPAT- 433 (489)
T ss_pred HHHHHHHHHC-CCc-ccCC----------------CCCCEEEEEECCHHHHHHHHHHHHHCCcEEeeeC------CCCC-
Confidence 9999999886 332 1111 1357888887666666788888877787766211 2221
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+ ...+.+||+++..++++.++.+.++|+
T Consensus 434 -----p--------~~~~~vRi~isa~~t~edId~~l~~L~ 461 (489)
T PLN02483 434 -----P--------LLLARARICISASHSREDLIKALEVIS 461 (489)
T ss_pred -----C--------CCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 0 124679999998777766666665554
No 55
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.90 E-value=4.1e-22 Score=191.23 Aligned_cols=248 Identities=14% Similarity=0.164 Sum_probs=170.1
Q ss_pred CCcccC---CCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------
Q 019543 46 PYDYTR---SGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------- 111 (339)
Q Consensus 46 ~~~y~r---~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------- 111 (339)
++..+| +..+.+++||+++|+++|.+++++|+||++|+.+++ ++++|||+|+++++.|......+.
T Consensus 71 ~~~~s~~~~G~~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~ 150 (393)
T TIGR01822 71 GMSSVRFICGTQDIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA 150 (393)
T ss_pred CCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC
Confidence 344455 235678999999999999999999999999998654 588999999999887765432111
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c----c--cCC
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P----L--ELG 143 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~----~--~~~ 143 (339)
++|+++|++||+++|+|++|+.|..+. . . ..+
T Consensus 151 ~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~ 230 (393)
T TIGR01822 151 NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGR 230 (393)
T ss_pred CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCC
Confidence 899999999999999999998775421 1 1 125
Q ss_pred CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHH
Q 019543 144 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIA 218 (339)
Q Consensus 144 ~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~ 218 (339)
.|++++|+||+++|. .+|+++++ +++.+.++.... .++...++...+.+...++. .+...++..++.+++.
T Consensus 231 ~di~~~s~sK~l~g~---r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~ 306 (393)
T TIGR01822 231 VDIITGTLGKALGGA---SGGFTTAR-KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFR 306 (393)
T ss_pred CeEEEEEChHHhhCC---CcEEEEeC-HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 799999999999853 47898876 467777765322 23444455433333334433 3445667778888888
Q ss_pred HHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCC
Q 019543 219 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHAS 298 (339)
Q Consensus 219 ~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~ 298 (339)
+.|++. ++.. .+ +.++++++.+.+.....+|++.|...|+.++ |.. .|..
T Consensus 307 ~~L~~~-g~~~--~~----------------~~~~~~~i~~~~~~~~~~l~~~L~~~gI~v~-~~~-----~~~~----- 356 (393)
T TIGR01822 307 ERMEAA-GFDI--KP----------------ADHPIIPVMLYDAVLAQRFARRLLEEGIYVT-GFF-----YPVV----- 356 (393)
T ss_pred HHHHHc-CCCC--CC----------------CCCCEEEEEeCCHHHHHHHHHHHHHCCeeEe-eeC-----CCCC-----
Confidence 888764 3321 11 1345777777665556788888877788776 422 1211
Q ss_pred CCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 299 IPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 299 ~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+ -....+|+|++..++++.|+.+.++|++
T Consensus 357 -~--------~~~~~iRis~~~~~t~edi~~~~~~l~~ 385 (393)
T TIGR01822 357 -P--------KGQARIRVQISAAHTEEQLDRAVEAFTR 385 (393)
T ss_pred -C--------CCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 0 0235699999998877777777777654
No 56
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.3e-22 Score=178.42 Aligned_cols=248 Identities=17% Similarity=0.253 Sum_probs=181.7
Q ss_pred CCcccCC---CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCC----CccchHH--------H
Q 019543 46 PYDYTRS---GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HLLGTGEEIVAGDD----LYGGTDR--------L 109 (339)
Q Consensus 46 ~~~y~r~---~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~----~y~~~~~--------~ 109 (339)
+...+|. ....++.||..+|++.+.|++++++||+.||..++ +++.|.|-|+.+.. +.+|.+- +
T Consensus 100 GlssvrfIcGtq~iHk~LE~kiAqfh~rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLckry~h~dv 179 (417)
T KOG1359|consen 100 GLSSVRFICGTQDIHKLLESKIAQFHGREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCKRYRHVDV 179 (417)
T ss_pred CccceeEEecchHHHHHHHHHHHHHhCCCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHHhhhccchh
Confidence 3444443 44679999999999999999999999999998544 58999999886543 2233220 0
Q ss_pred HH-------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c------ccCCCeEEEe
Q 019543 110 LS-------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P------LELGADIVMH 149 (339)
Q Consensus 110 ~~-------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~------~~~~~Di~~~ 149 (339)
+. ++|.+|++|||++|++||+|++|+++. . ....+|+..+
T Consensus 180 ~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiins 259 (417)
T KOG1359|consen 180 FDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINS 259 (417)
T ss_pred HHHHHHHHHhhhheEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhh
Confidence 00 999999999999999999999987642 2 1234689999
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCC
Q 019543 150 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 150 S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
+++|++|| ..||+..++. .++..+++..+ .++..++|.....+...++. -....++...+.+++++..+..
T Consensus 260 TLgKAlGg---a~GGyttgp~-~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a 335 (417)
T KOG1359|consen 260 TLGKALGG---ASGGYTTGPK-PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA 335 (417)
T ss_pred hhhhhhcC---CCCCCccCCh-hHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 99999985 4589998875 68888877654 56888998765444444433 2445666778888898877653
Q ss_pred CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHH
Q 019543 225 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVR 304 (339)
Q Consensus 225 ~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~ 304 (339)
++. +. ....+|+|+.+|+...+.++++.|...|+.|- | +.+|.+ |
T Consensus 336 -Gft-Is-----------------g~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vi-g-----fs~PvV------P---- 380 (417)
T KOG1359|consen 336 -GFT-IS-----------------GASHPICPVMLGDARLASKMADELLKRGIYVI-G-----FSYPVV------P---- 380 (417)
T ss_pred -Cce-ec-----------------CCCCCccceecccHHHHHHHHHHHHhcCceEE-e-----ecCCcC------C----
Confidence 322 11 11247999999999889999998877777653 3 345554 1
Q ss_pred HhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 305 QARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 305 ~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+.+||+.++..|+++.|+.+.+|+.+
T Consensus 381 ----~gkariRVqiSAaHt~edid~~i~Af~~ 408 (417)
T KOG1359|consen 381 ----KGKARIRVQISAAHTEEDIDRLIEAFSE 408 (417)
T ss_pred ----CCceEEEEEEehhcCHHHHHHHHHHHHH
Confidence 1457899999999999999999988864
No 57
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.89 E-value=1.9e-21 Score=183.59 Aligned_cols=260 Identities=19% Similarity=0.225 Sum_probs=183.3
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-h-cCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-L-LGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-l-l~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.++..+++|+.+++++|.+++++++||++|+..++. + ++|||+|+++.+.|.++...+.
T Consensus 16 ~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 95 (352)
T cd00616 16 LGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNID 95 (352)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcC
Confidence 468899999999999999999999999999986554 5 5899999999987765543221
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc--ccCCCeEEEeccc--cccccCCC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP--LELGADIVMHSAT--KFIAGHSD 160 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~~~--~~~~~Di~~~S~s--K~l~g~~~ 160 (339)
++|.++|+++|+++|+|++|+.|..... .....|+.++|++ |+++++
T Consensus 96 ~~~l~~~i~~~~~~v~~~~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~~~~~-- 173 (352)
T cd00616 96 PELIEAAITPRTKAIIPVHLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPTKNLTTG-- 173 (352)
T ss_pred HHHHHHhcCcCCeEEEEECCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCCCCCCccc--
Confidence 9999999999999999999988754322 2333588999976 999632
Q ss_pred ceEEEEEEcChhHHHHHHHHHHh---------------cCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCC
Q 019543 161 VMAGVLAVKGERLAKELYFLQNA---------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~---------------~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
.||+++++++++.++++..+.. ++..++++.+++++..++.++...++++++++++.+.|++++
T Consensus 174 -~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~ 252 (352)
T cd00616 174 -EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERYKELLADLP 252 (352)
T ss_pred -CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCC
Confidence 4788888776777777654321 124567788888877788888888888999999999999988
Q ss_pred CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--HHHHHHHHccCCcceeecccCCcccceeccccccCCCC----
Q 019543 226 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI---- 299 (339)
Q Consensus 226 ~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~---- 299 (339)
+++.+..+. +. ....++++|.+++ .....++.+.|+..||.++.. ..| ..|...
T Consensus 253 g~~~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~------~~~--~~~~~~~~~~ 312 (352)
T cd00616 253 GIRLPDVPP---GV---------KHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVH------YPP--LHHQPPYKKL 312 (352)
T ss_pred CccCCCCCC---CC---------ceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeee------cCc--cccCHhhhhc
Confidence 875332110 00 1135788998863 334567777777767654421 111 111110
Q ss_pred ---C-HHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 300 ---P-VEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 300 ---~-~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
. .......-+..+.||++++...+++.++.+.++|+
T Consensus 313 ~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 313 LGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred cCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 0 00000111235789999999999999999999875
No 58
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.89 E-value=3.8e-21 Score=183.26 Aligned_cols=268 Identities=14% Similarity=0.085 Sum_probs=186.4
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH-HHh-cCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAV-THL-LGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i-l~l-l~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.++.++++|+.+++++|.+++++++||++|+.++ .++ ++|||+|++++++|.++...+.
T Consensus 29 ~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d 108 (376)
T TIGR02379 29 DGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNID 108 (376)
T ss_pred CcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCCC
Confidence 3688999999999999999999999999999754 445 7999999999999987654332
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCC--cCcccCCCeEEEecc--ccccccCCC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVL--SRPLELGADIVMHSA--TKFIAGHSD 160 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~--~~~~~~~~Di~~~S~--sK~l~g~~~ 160 (339)
++|.++|++||++||+|++|+.|.. +++.....|+.++|| +|.++. +
T Consensus 109 ~~~le~~i~~~tk~Iip~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K~l~~--g 186 (376)
T TIGR02379 109 ETLIESAITHRTKAIVPVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETKNYTS--G 186 (376)
T ss_pred HHHHHHhcCcCceEEEEeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCCCCCcCcc--c
Confidence 9999999999999999999988753 334443348888887 466653 2
Q ss_pred ceEEEEEEcChhHHHHHHHHHHh---------------------cCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q 019543 161 VMAGVLAVKGERLAKELYFLQNA---------------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 219 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~---------------------~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~ 219 (339)
..||+++++++++.++++.++.. ++..++.+.|++++.+|+.++...++++++++++.+
T Consensus 187 ~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~ 266 (376)
T TIGR02379 187 GEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLATWQLYQD 266 (376)
T ss_pred CCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 35899989888898888877641 123466788888999999999999999999999999
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccC---
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH--- 296 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h--- 296 (339)
.|+.++.-..+..|..+... ....+++++.+.+.....++.+.|+..||.++.+. ..+..+|....+
T Consensus 267 ~L~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~~~~~~r~~l~~~L~~~gI~~~~~~-~p~~~~~~~~~~~~~ 336 (376)
T TIGR02379 267 ALKPLEEKGIIELPSIPNGC---------QHNAHMFYIKLKDEDDRNELIKYLKEQEIMAVFHY-VPLHSSPAGRYFGRF 336 (376)
T ss_pred HhccCCcCCeeeCCCCCCCC---------eeeeEEEEEEECCcCCHHHHHHHHHHCCCCccccC-cCCCcchhHHhhCCC
Confidence 99876521112233222111 11224666766543345678888888898877543 233333321111
Q ss_pred -CCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 297 -ASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 297 -~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.++|. ...+..+.|.+=+...-.++.++.+.+++++
T Consensus 337 ~~~~p~----~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~ 373 (376)
T TIGR02379 337 HGEDIY----TTKESERLVRLPLYYGLSKEDQARVIQTICD 373 (376)
T ss_pred CCCChH----HHHHHhceEEccCCCCCCHHHHHHHHHHHHH
Confidence 12221 1112345677776666667777788877765
No 59
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=5.7e-21 Score=182.68 Aligned_cols=250 Identities=26% Similarity=0.297 Sum_probs=173.5
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcH-HHHHHHHH-Hh---cCCCCEEEEcCCCccchHHHHH----------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSG-MAALAAVT-HL---LGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG-~~A~~~il-~l---l~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
...++.++.+|+++|++ +.++|+.| +.|+..+. .+ +++||+||+++..++++...+.
T Consensus 66 ~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~ 145 (405)
T COG0520 66 DLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD 145 (405)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC
Confidence 46788999999999976 55666666 78887644 34 6999999999988776542221
Q ss_pred ------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEeccccc
Q 019543 112 ------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKF 154 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK~ 154 (339)
++|+++||++|++++||.+|+.|+. .+...+++|++++|.+|+
T Consensus 146 ~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKw 225 (405)
T COG0520 146 DDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKW 225 (405)
T ss_pred CCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcCCCEEEEccccc
Confidence 9999999999999999999999876 355578999999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHH---------------------HhcCCCCChHHHHH----HHhchhhH--HHHH
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQ---------------------NAEGSGLAPFDCWI----CLRGVKTM--ALRV 207 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~---------------------~~~~~~~~~~~a~~----~~~~l~~~--~~r~ 207 (339)
+.||.+ .|++++++ ++.+.+.... .-+-.+.+.....+ +++.++.+ ....
T Consensus 226 l~gP~G--iGvLy~r~-~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~ 302 (405)
T COG0520 226 LLGPTG--IGVLYVRK-ELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIE 302 (405)
T ss_pred ccCCCc--eEEEEEch-HHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHH
Confidence 888854 57888886 5655552110 00111222222222 22222222 2334
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccc
Q 019543 208 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSL 287 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~ 287 (339)
+..++..+++.+.|+++|+++....+. ...+++++|.+.+. .+..++..|...+|.++.|.
T Consensus 303 ~~e~~L~~~~~~~L~~~~~v~i~g~~~--------------~~r~~~vsF~v~~~-~~~dv~~~L~~~gI~vr~g~---- 363 (405)
T COG0520 303 AHERELTEYLLEGLSELPGVEIYGPPD--------------ADRGGIVSFNVKGI-HPHDVATLLDEKGIAVRAGH---- 363 (405)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEecCCc--------------ccCceEEEEEeCCC-CHHHHHHHHHhCCeEEEecc----
Confidence 444566888899999999986443321 12679999998655 34566777777889999875
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+|+...|. ..|+. +.+|+|++..++++.|+.|.++|+++
T Consensus 364 --~ca~p~~~--------~~~~~-~~iR~S~~~YNt~edid~l~~aL~~~ 402 (405)
T COG0520 364 --HCAQPLHR--------LLGVD-ATIRASLHLYNTEEDVDRLLEALKKA 402 (405)
T ss_pred --ccccHHHH--------hcCCC-CceEEEEeecCCHHHHHHHHHHHHHH
Confidence 44432232 23333 45999999999999999999999874
No 60
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.88 E-value=6.4e-21 Score=182.34 Aligned_cols=264 Identities=20% Similarity=0.224 Sum_probs=184.8
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh-cCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL-LGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l-l~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.++..++||+.+++++|.+++++++||++|+.+++ ++ ++|||+|+++++.|.++...+.
T Consensus 27 ~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d 106 (380)
T TIGR03588 27 QGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGNID 106 (380)
T ss_pred CChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCCcC
Confidence 46789999999999999999999999999998655 45 7899999999988765542211
Q ss_pred -------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCC----CeEEEeccc--cc
Q 019543 112 -------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELG----ADIVMHSAT--KF 154 (339)
Q Consensus 112 -------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~----~Di~~~S~s--K~ 154 (339)
++|.++|++||++||+|++|+.|...+....+ .|+.++|++ |+
T Consensus 107 ~~~l~~~i~~~~~~~t~~v~~~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~ 186 (380)
T TIGR03588 107 EDALEKKLAAAKGKLPKAIVPVDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFSFHPVKI 186 (380)
T ss_pred HHHHHHHhhcccCCCceEEEEeCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEecCCCCc
Confidence 89999999999999999999988543333333 499999986 88
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHh-------------------------cCCCCChHHHHHHHhchhhHHHHHHH
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNA-------------------------EGSGLAPFDCWICLRGVKTMALRVEK 209 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~-------------------------~~~~~~~~~a~~~~~~l~~~~~r~~~ 209 (339)
++.+ .||+++++++++.++++.++.. ++..|+.+.+++++.+|+.++.+.++
T Consensus 187 ~~~~---~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l~~~~~~ 263 (380)
T TIGR03588 187 ITTA---EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKLDRFVAK 263 (380)
T ss_pred cccc---CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHHHHHHHH
Confidence 8742 5899998887888877654320 12456778888888899999999999
Q ss_pred HHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--HHHHHHHHccCCcceeecccCCcccc
Q 019543 210 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSL 287 (339)
Q Consensus 210 ~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--~~~~~~~~~~L~~~~i~v~~G~~~s~ 287 (339)
++++++++.+.|+..+.+... .+. ... .....++++.+.. .....++.+.|+..||.++.... .+
T Consensus 264 r~~~~~~~~~~L~~~~~~~~~-~~~--~~~---------~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~-~~ 330 (380)
T TIGR03588 264 RREIAARYDRLLKDLPYFTPL-TIP--LGS---------KSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYI-PV 330 (380)
T ss_pred HHHHHHHHHHHhcCCCCccCC-CCC--CCC---------EeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCc-cc
Confidence 999999999999998865421 110 000 0011234444432 12356777888888888774421 22
Q ss_pred eecccccc---CCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 288 ISMPCFMS---HASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 288 ~~~p~~~~---h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
...|.... +..+|.. .-+..+.|++.+...-+++.++.+.+++++
T Consensus 331 ~~~~~~~~~~~~~~~p~a----~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~ 378 (380)
T TIGR03588 331 HLQPYYRQGFGDGDLPSA----ENFYLAEISLPLHPALTLEQQQRVVETLRK 378 (380)
T ss_pred ccChhhhccCCcCCCcHH----HHHHhceEEcCCCCCCCHHHHHHHHHHHHH
Confidence 22222111 1112211 113457899999887778888888888875
No 61
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.88 E-value=1.1e-20 Score=183.22 Aligned_cols=216 Identities=17% Similarity=0.060 Sum_probs=161.4
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh---------cCCCCEEEEcCCCccchHHHHH-----------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL---------LGTGEEIVAGDDLYGGTDRLLS----------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l---------l~~GD~Vi~~~~~y~~~~~~~~----------- 111 (339)
.++.+++||+++|+++|.+++++++||++|+..++ .+ ++|||+||+++++|.++...+.
T Consensus 61 ~G~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdv 140 (438)
T PRK15407 61 TGRFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDV 140 (438)
T ss_pred CChhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEec
Confidence 46778999999999999999999999999997543 33 5899999999998876653322
Q ss_pred -----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--cccCCCeEEEecc--c
Q 019543 112 -----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR--PLELGADIVMHSA--T 152 (339)
Q Consensus 112 -----------------------------------~~I~~la~~~g~~livD~a~a~g~~~~--~~~~~~Di~~~S~--s 152 (339)
++|.++|++||++||+|++|+.|...+ ..+...|+.++|| +
T Consensus 141 d~~~~~id~~~le~~i~~~tkaVi~~~~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~gd~~~fSf~~~ 220 (438)
T PRK15407 141 ELPTYNIDASLLEAAVSPKTKAIMIAHTLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFGDIATLSFYPA 220 (438)
T ss_pred CCCcCCcCHHHHHHHcCcCCeEEEEeCCCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccCceEEEeCCCC
Confidence 999999999999999999999886533 3333349999998 4
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHh---------------------------------------cCCCCChHHH
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNA---------------------------------------EGSGLAPFDC 193 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~---------------------------------------~~~~~~~~~a 193 (339)
|.+.. ..||+|+++++++.++++.+++. +...|+++.|
T Consensus 221 k~~~~---geGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~A 297 (438)
T PRK15407 221 HHITM---GEGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQA 297 (438)
T ss_pred CCccc---cCceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHH
Confidence 77763 24899999998888877765431 1246788999
Q ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHcc
Q 019543 194 WICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVET 271 (339)
Q Consensus 194 ~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~ 271 (339)
++++.+|+.+++++++++++++++.+.|+..+++. ..|..+... ......+++.+.+. ....+|.+.
T Consensus 298 Aig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~--~~~~~~~~~---------~~~~~~~~i~~~~~~~~~Rd~l~~~ 366 (438)
T PRK15407 298 AIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFL--ILPEATPNS---------DPSWFGFPITVKEDAGFTRVELVKY 366 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcc--ccCcCCCCC---------eeEEEEEEEEECCcCCCCHHHHHHH
Confidence 99999999999999999999999999999876531 123211110 01123566666432 234678888
Q ss_pred CCcceeecccC
Q 019543 272 TKYFSITVSFG 282 (339)
Q Consensus 272 L~~~~i~v~~G 282 (339)
|+..||.++..
T Consensus 367 L~~~GI~~~~~ 377 (438)
T PRK15407 367 LEENKIGTRLL 377 (438)
T ss_pred HHHCCCCcccc
Confidence 88888877643
No 62
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.87 E-value=2e-20 Score=178.55 Aligned_cols=267 Identities=14% Similarity=0.101 Sum_probs=183.3
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH-HHh-cCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAV-THL-LGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i-l~l-l~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
..+.++++|+++++++|.+++++++||++|+.++ ..+ ++|||+|+++.++|.++...+.
T Consensus 29 ~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d 108 (375)
T PRK11706 29 DGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNID 108 (375)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcC
Confidence 3678899999999999999999999999999754 443 7899999999999887654332
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCC--cCcccCCCeEEEeccc--cccccCCC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVL--SRPLELGADIVMHSAT--KFIAGHSD 160 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~--~~~~~~~~Di~~~S~s--K~l~g~~~ 160 (339)
++|.++|++||++||+|++|+.|.. +++.....|+.++||+ |.++. |
T Consensus 109 ~~~le~~i~~~tk~i~~~~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K~l~~-g- 186 (375)
T PRK11706 109 ETLIEAAITPKTRAIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKNYTA-G- 186 (375)
T ss_pred HHHHHHhcCCCCeEEEEeCCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCCccccc-c-
Confidence 8999999999999999999988753 3334434588888876 99974 2
Q ss_pred ceEEEEEEcChhHHHHHHHHHHh---------------------cCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q 019543 161 VMAGVLAVKGERLAKELYFLQNA---------------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 219 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~---------------------~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~ 219 (339)
.||+++++++++.++++.+++. ++..++++.+++++.+++.++...++++++++++.+
T Consensus 187 -~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~ 265 (375)
T PRK11706 187 -EGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYD 265 (375)
T ss_pred -CCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3677777777888887776531 123356778888889999999999999999999999
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceecccccc----
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS---- 295 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~---- 295 (339)
.|.+++....+..|..+... ....+++++.+.+.....++.+.|+..||.++.+. ..+..+|....
T Consensus 266 ~L~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~~~~~-~p~~~~~~~~~~~~~ 335 (375)
T PRK11706 266 ALAPLAEAGRIELPSIPDDC---------KHNAHMFYIKLRDLEDRSALINFLKEAGIMAVFHY-IPLHSSPAGERFGRF 335 (375)
T ss_pred HhcCCCcCCeeecCCCCCCC---------ceeeEEEEEEECCcCCHHHHHHHHHHCCCCccccC-CccCcchhhHhcCCC
Confidence 99887632122333221110 11345777777544456788888888898877543 23322332111
Q ss_pred CCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 296 HASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 296 h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+.++|.... +..+.|-+-+...-.++.++.+.+++++
T Consensus 336 ~~~~p~a~~----~~~~~l~lP~~~~l~~~~~~~i~~~i~~ 372 (375)
T PRK11706 336 HGEDRYTTK----ESERLLRLPLFYNLTDVEQRTVIDTILE 372 (375)
T ss_pred CCCChHHHH----HHhCcEeccCCCCCCHHHHHHHHHHHHH
Confidence 112332211 2345566655544445556666666654
No 63
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.87 E-value=2.7e-20 Score=175.50 Aligned_cols=235 Identities=17% Similarity=0.218 Sum_probs=154.5
Q ss_pred CCchHHHHHHHHHhHhCC--CeEEEcCcHHHHHHH-HHHhcCCCCEEEEc---CCCccchHHH----------------H
Q 019543 53 GNPTRDALESLLAKLDKA--DRALCFTSGMAALAA-VTHLLGTGEEIVAG---DDLYGGTDRL----------------L 110 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~---~~~y~~~~~~----------------~ 110 (339)
..+.+++||+++|+++|. +++++++||++||.. +.++++|||+|+++ .+.|...... +
T Consensus 52 ~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~~~l~~l 131 (346)
T TIGR03576 52 PAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFESDELSEL 131 (346)
T ss_pred CHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHcCCEEeccCCHHHH
Confidence 457899999999999998 899999999999986 45589999999864 2333221100 1
Q ss_pred H-------------------------HHHHHHHHHcCCEEEEeCCcCCCCC---cCc--ccCCCeEEEeccccccccCCC
Q 019543 111 S-------------------------RKIAEMAHAHGALLLVDNSIMSPVL---SRP--LELGADIVMHSATKFIAGHSD 160 (339)
Q Consensus 111 ~-------------------------~~I~~la~~~g~~livD~a~a~g~~---~~~--~~~~~Di~~~S~sK~l~g~~~ 160 (339)
. ++|+++|++||++|++||+|+.++. +.+ ...+.|++++||||+++|
T Consensus 132 ~~~~~~~lIiitg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG--- 208 (346)
T TIGR03576 132 KKIDGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDG--- 208 (346)
T ss_pred hhCcCceEEEEECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccc---
Confidence 0 6889999999999999999998753 221 234579999999998864
Q ss_pred ceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH--HHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCC
Q 019543 161 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 238 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~--~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~ 238 (339)
.++|++++++ ++++.+++..+.+..++++..++.+..+|+.. +.+.+..+++.+.+.+.++.. . + +|.
T Consensus 209 ~r~G~v~~~~-~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~---~-~-~~~---- 278 (346)
T TIGR03576 209 PRGGLLAGRK-ELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL---N-V-ERT---- 278 (346)
T ss_pred cceEEEEeCH-HHHHHHHHhhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC---C-C-CcC----
Confidence 4689999875 78888888776555445666666666666543 334455556666666666532 1 1 221
Q ss_pred CchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe
Q 019543 239 PGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 318 (339)
Q Consensus 239 ~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv 318 (339)
.++.+.+.+.+.+......+.|+..|+.+..|..+ + + .++.+|||+
T Consensus 279 ------------~~~f~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f-----~----------------~-~~~~vRis~ 324 (346)
T TIGR03576 279 ------------PTGFVIKGVEEEKLIEIGLDLLRNYGIITITAVGM-----P----------------G-ASKTLRFDL 324 (346)
T ss_pred ------------CCeEEEEeCCCCCHHHHHHHHHHhCCEEEeCCccc-----C----------------C-CCCeEEEEE
Confidence 23455566643211122334456678877754321 1 0 246899999
Q ss_pred ccCC-----HHHHHHHHHHHH
Q 019543 319 GIED-----VNDLISDLDKAL 334 (339)
Q Consensus 319 g~e~-----~~~li~~l~~al 334 (339)
+.++ .+.+++.|.+.|
T Consensus 325 ~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 325 AAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred ecChHHhcCHHHHHHHHHhcc
Confidence 9876 455555554443
No 64
>PLN02822 serine palmitoyltransferase
Probab=99.87 E-value=1.8e-20 Score=183.82 Aligned_cols=244 Identities=15% Similarity=0.168 Sum_probs=170.0
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHH----------------------H
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDR----------------------L 109 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~----------------------~ 109 (339)
.++.+.+||++|+++++.++++++++|.+++.++ .+++++||.|+++...+..... .
T Consensus 152 ~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~ 231 (481)
T PLN02822 152 TIDVHLDCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNT 231 (481)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHH
Confidence 3466899999999999999999999998888754 4589999999987653322110 0
Q ss_pred H-------------H------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc-------cc---CCCeEEE
Q 019543 110 L-------------S------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP-------LE---LGADIVM 148 (339)
Q Consensus 110 ~-------------~------------------~~I~~la~~~g~~livD~a~a~g~~~~~-------~~---~~~Di~~ 148 (339)
+ + ++|+++|++||+++|+||+|+.|++++. .. ...||++
T Consensus 232 l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~ 311 (481)
T PLN02822 232 LEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIIT 311 (481)
T ss_pred HHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEE
Confidence 0 0 8999999999999999999998775421 11 2468999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHhC
Q 019543 149 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 149 ~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L~~ 223 (339)
+||+|+++. .||++++++ ++++.++.... .+++.++|..++.++..|+.+ +..+++.+++.+++.+.|++
T Consensus 312 ~s~sKalg~----~GG~i~g~~-~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~ 386 (481)
T PLN02822 312 AAMGHALAT----EGGFCTGSA-RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSD 386 (481)
T ss_pred ecchhhhhh----CCeEEEcCH-HHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 999999983 468998764 67777664322 345666777665555555443 45778888999999999987
Q ss_pred CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--------HHHHHHHccCC-cceeecccCCcccceeccccc
Q 019543 224 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--------ALSKHVVETTK-YFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 224 ~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--------~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~ 294 (339)
.+++.. .. .+.++++++.+++. ....+|++.|. +.|+.+..+.. |..
T Consensus 387 ~~g~~~-~~----------------~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~------~~~- 442 (481)
T PLN02822 387 IPGLSI-GS----------------NTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKR------STL- 442 (481)
T ss_pred cCCccc-CC----------------CCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCC------CCc-
Confidence 655432 11 12578888888531 22467888874 77887764321 111
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.. +-.+..+|+++...++++.|+.+.++|++
T Consensus 443 --~~---------~~~~~~lRi~is~~~t~edI~~~~~~l~~ 473 (481)
T PLN02822 443 --DK---------CRLPVGIRLFVSAGHTESDILKASESLKR 473 (481)
T ss_pred --CC---------CCCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 00 00234699999998888888888777764
No 65
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.87 E-value=4.6e-21 Score=174.74 Aligned_cols=238 Identities=21% Similarity=0.247 Sum_probs=174.0
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHh--cCCCCEEEEcCCCccchH----------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHL--LGTGEEIVAGDDLYGGTD---------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~l--l~~GD~Vi~~~~~y~~~~---------------------- 107 (339)
.+..+.+||++||++.+.+.+++|+|++-||.+ +..| .-||-+|+. |...++..
T Consensus 214 ~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~lpgcei~S-D~gNHASMI~GIrns~v~K~IFrHND~~hL 292 (570)
T KOG1360|consen 214 HSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKLPGCEIFS-DEGNHASMIQGIRNSRVPKHIFRHNDLDHL 292 (570)
T ss_pred CCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHHHCCCcEEec-cccchHHHHHHhhhcCCcceeeccCCHHHH
Confidence 446688999999999999999999999999975 3334 347887765 44333221
Q ss_pred -HHHH-------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---------cccCCCeEEEeccc
Q 019543 108 -RLLS-------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSAT 152 (339)
Q Consensus 108 -~~~~-------------------------~~I~~la~~~g~~livD~a~a~g~~~~---------~~~~~~Di~~~S~s 152 (339)
.+++ ++|+++|+|||++.++||+|+.|.++. .+-...||+.+++.
T Consensus 293 ~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLg 372 (570)
T KOG1360|consen 293 EQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLG 372 (570)
T ss_pred HHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchh
Confidence 1111 999999999999999999999887642 12235699999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhh---H--HHHHHHHHHHHHHHHHHHhCCC
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKT---M--ALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~---~--~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
|+|| .+||+|+... .+++.+|.+.. ++++.++|....-++.+++. . ...++++++|.+++++.|.+..
T Consensus 373 KafG----cVGGYIAat~-~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~G 447 (570)
T KOG1360|consen 373 KAFG----CVGGYIAATR-KLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELG 447 (570)
T ss_pred hhcc----cccceehhhh-hHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 9998 6799998875 79999998765 57889999765544444332 2 3445667788999999988753
Q ss_pred CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcccceeccccccCCCCCHHHH
Q 019543 226 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVR 304 (339)
Q Consensus 226 ~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~ 304 (339)
.|-++ ..++|+++.+++...+.+.++.| ..++|.|- -+.+|.+.
T Consensus 448 ------iPVi~-------------~pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQ------aINyPTV~---------- 492 (570)
T KOG1360|consen 448 ------IPVIP-------------NPSHIIPVRVGDAALAKQASDILISKHNIYVQ------AINYPTVA---------- 492 (570)
T ss_pred ------CcccC-------------CCcceeeeeccCHHHHHHHHHHHHHhcCeEEE------eccCCccc----------
Confidence 23221 24789999999998888888876 34444433 24455431
Q ss_pred HhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 305 QARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 305 ~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
....++||..+..|+++..++|.++|.
T Consensus 493 ----rG~E~LRiaPTP~HT~~mm~~lv~~l~ 519 (570)
T KOG1360|consen 493 ----RGTERLRIAPTPHHTPQMMNILVNALL 519 (570)
T ss_pred ----ccceeeecCCCCCCCHHHHHHHHHHHH
Confidence 245789999999999888888888775
No 66
>PRK07179 hypothetical protein; Provisional
Probab=99.87 E-value=4.6e-20 Score=177.98 Aligned_cols=238 Identities=18% Similarity=0.187 Sum_probs=163.9
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHH----------------------H
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRL----------------------L 110 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~----------------------~ 110 (339)
.+...+||++||+++|.+++++++||++|+.+++ .+.++||+|+++...+...... +
T Consensus 98 ~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l 177 (407)
T PRK07179 98 DSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRHNDVDHLRRQI 177 (407)
T ss_pred chHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecCCCHHHHHHHH
Confidence 3678999999999999999999999999998654 5788999999887654333211 1
Q ss_pred H----------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-------ccc--CCCeEEEeccccccccCC
Q 019543 111 S----------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-------PLE--LGADIVMHSATKFIAGHS 159 (339)
Q Consensus 111 ~----------------------~~I~~la~~~g~~livD~a~a~g~~~~-------~~~--~~~Di~~~S~sK~l~g~~ 159 (339)
+ ++|.++|++||+++|+|++|+.|..+. ... .++|++++|++|++++
T Consensus 178 ~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~-- 255 (407)
T PRK07179 178 ERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG-- 255 (407)
T ss_pred HhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc--
Confidence 1 999999999999999999998765321 111 2469999999999984
Q ss_pred CceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhc---hhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCC
Q 019543 160 DVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRG---VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 234 (339)
Q Consensus 160 ~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~---l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~ 234 (339)
.+|++++++ ++++.+..... .++.++++...+.+... ++..+.++++..++.+++.+.|+++ ++. +
T Consensus 256 --~~G~l~~~~-~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v---- 326 (407)
T PRK07179 256 --RAGIITCPR-ELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL-GYN-I---- 326 (407)
T ss_pred --cCeEEEeCH-HHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC-C----
Confidence 268888764 66666654332 24455555443333233 3334556777888889999999875 321 1
Q ss_pred CCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeE
Q 019543 235 LPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 314 (339)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~l 314 (339)
.+.+++++|.+++...+..+.+.|.+.|+.++ .+..|.. + ..++.|
T Consensus 327 --------------~~~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~------~~~~p~~------~--------~~~~~l 372 (407)
T PRK07179 327 --------------RSESQIIALETGSERNTEVLRDALEERNVFGA------VFCAPAT------P--------KNRNLI 372 (407)
T ss_pred --------------CCCCCEEEEEeCCHHHHHHHHHHHHHCCceEe------eecCCCC------C--------CCCceE
Confidence 12467899988765556677777877777532 1222321 0 134789
Q ss_pred EEEeccCCHHHHHHHHHHHHhc
Q 019543 315 RISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 315 Risvg~e~~~~li~~l~~al~~ 336 (339)
|||++..++++.++.+.++|++
T Consensus 373 Ris~~~~~t~edi~~~~~~l~~ 394 (407)
T PRK07179 373 RLSLNADLTASDLDRVLEVCRE 394 (407)
T ss_pred EEEECCCCCHHHHHHHHHHHHH
Confidence 9999987777777777776653
No 67
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.86 E-value=1e-19 Score=173.96 Aligned_cols=264 Identities=17% Similarity=0.199 Sum_probs=180.1
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh-cCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL-LGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l-l~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.+|.+.+||+++|+++|.++++.++||++|+.+++ ++ ++|||+|+++++.|.++...+.
T Consensus 31 ~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d 110 (379)
T PRK11658 31 TGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDTLMVT 110 (379)
T ss_pred CCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCcCCcC
Confidence 47889999999999999999999999999998654 46 7899999999998877654332
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--cc-cCCCeEEEeccccccccCCCc
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR--PL-ELGADIVMHSATKFIAGHSDV 161 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~~--~~-~~~~Di~~~S~sK~l~g~~~~ 161 (339)
++|.++|++||++||+|++|+.|.... .. ..+.++..++.+|.+.+ .
T Consensus 111 ~~~l~~~i~~~tkav~~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~---g 187 (379)
T PRK11658 111 PEAIEAAITPRTKAIIPVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNITC---A 187 (379)
T ss_pred HHHHHHhcccCCeEEEEeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCCcCcc---c
Confidence 999999999999999999999875433 22 24545555555688864 3
Q ss_pred eEEEEEEcChhHHHHHHHHHHh------------------------cCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHH
Q 019543 162 MAGVLAVKGERLAKELYFLQNA------------------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKI 217 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~~~~~------------------------~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l 217 (339)
.||+++++++++.++++.++.. +...|+.+.|++++.+++.+++..++++++++++
T Consensus 188 ~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~ 267 (379)
T PRK11658 188 EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNARRREIAARY 267 (379)
T ss_pred CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899998877888888765421 1134667788889999999999999999999999
Q ss_pred HHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH---HHHHHHHccCCcceeecccCCcccceeccccc
Q 019543 218 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---ALSKHVVETTKYFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 218 ~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~---~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~ 294 (339)
.+.|++++.+ .+..|..+. .....+++|.+... ....++.+.|+..||.++... ..+..+|...
T Consensus 268 ~~~L~~~~~~-~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~-~~~~~~~~~~ 334 (379)
T PRK11658 268 LQALADLPFQ-PLSLPAWPH-----------QHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHF-RAAHTQKYYR 334 (379)
T ss_pred HHHhcCCCCc-cCcCCCCCC-----------ceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccC-cCcccChhhh
Confidence 9999987642 222221100 01124666666421 235678888888888765332 1222233211
Q ss_pred c---CCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 295 S---HASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 295 ~---h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
. ...+|... .+....|.+-+...-+++.++.+.+++++
T Consensus 335 ~~~~~~~~p~~~----~~~~~~l~lP~~~~l~~~~~~~i~~~i~~ 375 (379)
T PRK11658 335 ERFPTLSLPNTE----WNSERICSLPLFPDMTDADVDRVITALQQ 375 (379)
T ss_pred ccCCCCCChHHH----HHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 0 11222211 12345666666655556667777777765
No 68
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.86 E-value=4.5e-20 Score=178.02 Aligned_cols=239 Identities=22% Similarity=0.230 Sum_probs=164.3
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcC--CCCEEEEcCCCccchHH----------------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLG--TGEEIVAGDDLYGGTDR---------------------- 108 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~--~GD~Vi~~~~~y~~~~~---------------------- 108 (339)
++.+++||++|++++|.+.+++|+||++|+..++. +.+ +||.|++++..++.+..
T Consensus 89 ~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~d~~~l~~ 168 (406)
T PRK13393 89 NHYHVLLEAELADLHGKEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRHNDPADLER 168 (406)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCCCHHHHHH
Confidence 45789999999999999999999999999986554 544 78887776543322111
Q ss_pred HHH-------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c------ccCCCeEEEeccccc
Q 019543 109 LLS-------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P------LELGADIVMHSATKF 154 (339)
Q Consensus 109 ~~~-------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~------~~~~~Di~~~S~sK~ 154 (339)
.++ ++|.++|++||+++++|++|+.|++++ . .....||+++||||+
T Consensus 169 ~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa 248 (406)
T PRK13393 169 KLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKA 248 (406)
T ss_pred HHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchh
Confidence 110 999999999999999999998776432 1 112258999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHh--cCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
++. .||+++++ +++.+.++..... ++.+.+|..++.+...|+.+ ..+.++.+++.+++.+.|++. ++.
T Consensus 249 ~g~----~GG~~~~~-~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~- 321 (406)
T PRK13393 249 FGV----MGGYITGS-AALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA-GIP- 321 (406)
T ss_pred hcc----cCceeeCC-HHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CCC-
Confidence 984 36888765 4677777665432 45667776555555555443 233455567888899988764 221
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCc-ceeecccCCcccceeccccccCCCCCHHHHHhCC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 308 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~-~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g 308 (339)
.. ++.++++++.+++...+.++.+.|.+ .|+.++.+. +|.. +
T Consensus 322 ----~~-------------~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~------~p~~------p-------- 364 (406)
T PRK13393 322 ----HL-------------PNPSHIVPVMVGDPVLCKQISDELLDRYGIYVQPIN------YPTV------P-------- 364 (406)
T ss_pred ----cC-------------CCCCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeEC------CCCC------C--------
Confidence 11 22567888888765566788888865 588776432 2321 1
Q ss_pred CCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 309 LTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 309 ~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
...+.||||+.+.++++.++.+.++|++
T Consensus 365 ~g~~~iRis~~~~~t~edid~l~~~l~~ 392 (406)
T PRK13393 365 RGTERLRITPSPLHTDADIEHLVQALSE 392 (406)
T ss_pred CCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 1236799999988877777777777654
No 69
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.86 E-value=4.3e-20 Score=178.37 Aligned_cols=238 Identities=19% Similarity=0.160 Sum_probs=163.3
Q ss_pred chHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hc--CCCCEEEEcCCCccchHH----------------------H
Q 019543 55 PTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LL--GTGEEIVAGDDLYGGTDR----------------------L 109 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll--~~GD~Vi~~~~~y~~~~~----------------------~ 109 (339)
+.+.+||+++|+++|.+++++|+||++|+..++. +. .+||.|+++...+..+.. .
T Consensus 91 ~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~ 170 (410)
T PRK13392 91 HPHVLLERELADLHGKESALLFTSGYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHNDLADLEEQ 170 (410)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCCCHHHHHHH
Confidence 4689999999999999999999999988875443 43 489998887543322211 1
Q ss_pred HH-------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c------ccCCCeEEEecccccc
Q 019543 110 LS-------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P------LELGADIVMHSATKFI 155 (339)
Q Consensus 110 ~~-------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~------~~~~~Di~~~S~sK~l 155 (339)
++ ++|.++|++||+++|+|++|+.|.++. . .....|++++|+||++
T Consensus 171 l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~ 250 (410)
T PRK13392 171 LASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAF 250 (410)
T ss_pred HHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhh
Confidence 10 999999999999999999998766431 1 1124589999999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceEE
Q 019543 156 AGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKV 230 (339)
Q Consensus 156 ~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~v 230 (339)
++. ||+++++ +++++.++.... .++..++|..++.+...|+. ...+.+++.++.+++.+.|++. ++..
T Consensus 251 g~~----GG~~~~~-~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~- 323 (410)
T PRK13392 251 GCL----GGYIAAS-ADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN-GIPV- 323 (410)
T ss_pred hcc----cchhhcC-HHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCC-
Confidence 853 5888775 478887776553 24566676655544444443 3445566778888899988875 3321
Q ss_pred ecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC-cceeecccCCcccceeccccccCCCCCHHHHHhCCC
Q 019543 231 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 309 (339)
Q Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~ 309 (339)
+| +.++++++.+++...+.++.+.|. ..|+.++.+. .|.. + -
T Consensus 324 -~~----------------~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~------~p~~------~--------~ 366 (410)
T PRK13392 324 -MP----------------SPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPIN------YPTV------P--------R 366 (410)
T ss_pred -CC----------------CCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeC------CCCC------C--------C
Confidence 11 246778787776555678888874 5688876432 2211 0 1
Q ss_pred CCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 310 TEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 310 ~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
....||||+.+.++++.++.+.++|++
T Consensus 367 ~~~~lRis~~~~~t~edid~l~~aL~~ 393 (410)
T PRK13392 367 GTERLRITPTPLHDDEDIDALVAALVA 393 (410)
T ss_pred CCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 236899999887777777777776653
No 70
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.86 E-value=9.1e-20 Score=175.65 Aligned_cols=240 Identities=22% Similarity=0.237 Sum_probs=163.8
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcC--CCCEEEEcCCCccchH----------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLG--TGEEIVAGDDLYGGTD---------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~--~GD~Vi~~~~~y~~~~---------------------- 107 (339)
.++.+.+||+++++++|.+++++++||++|+..++. +.+ +||.|+++...+..+.
T Consensus 88 ~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~ 167 (402)
T TIGR01821 88 TNIPHVELEAELADLHGKESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRHNDVAHLE 167 (402)
T ss_pred CcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECCCCHHHHH
Confidence 357899999999999999999999999999875544 443 7888877643221111
Q ss_pred HHHH-------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c------ccCCCeEEEecccc
Q 019543 108 RLLS-------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P------LELGADIVMHSATK 153 (339)
Q Consensus 108 ~~~~-------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~------~~~~~Di~~~S~sK 153 (339)
.++. ++|.++|++||+++|+|++|+.|.++. . +....|++++||||
T Consensus 168 ~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sK 247 (402)
T TIGR01821 168 KLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAK 247 (402)
T ss_pred HHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechh
Confidence 1110 999999999999999999998765432 1 11235899999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
++++. ||++++++ ++++.++.... .+++..+|..++.++..|+.+ +.+.++..++.+++.+.|+++ ++.
T Consensus 248 a~g~~----GG~i~~~~-~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 321 (402)
T TIGR01821 248 AFGVV----GGYIAASR-KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL-GIP 321 (402)
T ss_pred hhccC----CceeecCH-HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 99853 57887764 67777765433 245667777666655555543 334555567888899988875 221
Q ss_pred EEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC-cceeecccCCcccceeccccccCCCCCHHHHHhC
Q 019543 229 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQAR 307 (339)
Q Consensus 229 ~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~ 307 (339)
.. .+.+++++|.+++...+.++.+.|. ..|+.++.. .+|.+ +
T Consensus 322 -----~~-------------~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~------~~p~~------~------- 364 (402)
T TIGR01821 322 -----VI-------------PNPSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPI------NYPTV------P------- 364 (402)
T ss_pred -----cC-------------CCCCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeE------CCCCC------C-------
Confidence 11 1246788888876556677888874 457776632 12321 0
Q ss_pred CCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 308 GLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 308 g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.....||||+.+.++++.++.+.++|++
T Consensus 365 -~g~~~lRis~~~~~t~edi~~~~~~l~~ 392 (402)
T TIGR01821 365 -RGTERLRITPTPAHTDKMIDDLVEALLL 392 (402)
T ss_pred -CCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 1236799999888777777777777654
No 71
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.85 E-value=1.2e-19 Score=174.97 Aligned_cols=240 Identities=21% Similarity=0.204 Sum_probs=164.7
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcC--CCCEEEEcCCCccchH----------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLG--TGEEIVAGDDLYGGTD---------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~--~GD~Vi~~~~~y~~~~---------------------- 107 (339)
.++.+.+||++||+++|.+.+++++||+.|+..++. +.+ +++.|+.+...+....
T Consensus 89 ~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~~d~~~le 168 (407)
T PRK09064 89 TNHYHVELERELADLHGKEAALVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRHNDVAHLE 168 (407)
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECCCCHHHHH
Confidence 357899999999999999999999999999875444 443 7888777654322111
Q ss_pred HHHH-------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c------ccCCCeEEEecccc
Q 019543 108 RLLS-------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P------LELGADIVMHSATK 153 (339)
Q Consensus 108 ~~~~-------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~------~~~~~Di~~~S~sK 153 (339)
.+++ ++|.++|++||++||+||+|+.|.+++ . +....|++++||||
T Consensus 169 ~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sK 248 (407)
T PRK09064 169 ELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAK 248 (407)
T ss_pred HHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecch
Confidence 1111 899999999999999999998665431 1 11235899999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
++|. .||++++++ ++++.++.... .+++..+|..++.++..++.+ ...+++..++.+++.+.|++. ++.
T Consensus 249 a~g~----~GG~~~~~~-~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 322 (407)
T PRK09064 249 AFGV----MGGYIAGSA-ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA-GIP 322 (407)
T ss_pred hhhc----cCceEecCH-HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 9984 358888764 67777765433 235567776666565566554 333566778888999998875 222
Q ss_pred EEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC-cceeecccCCcccceeccccccCCCCCHHHHHhC
Q 019543 229 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQAR 307 (339)
Q Consensus 229 ~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~ 307 (339)
.. .+.+++++|.+++...+.++.+.|. ..|+.++.. .+|.. +
T Consensus 323 -----~~-------------~~~~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~------~~p~~------~------- 365 (407)
T PRK09064 323 -----VM-------------PNESHIVPVMVGDPEKCKKASDMLLEEHGIYVQPI------NYPTV------P------- 365 (407)
T ss_pred -----CC-------------CCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeE------CCCCC------C-------
Confidence 11 1246788888876556677888774 458877632 12211 1
Q ss_pred CCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 308 GLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 308 g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
...+.||||+++.++++.++.+.++|++
T Consensus 366 -~~~~~lRis~~~~~t~edi~~l~~~l~~ 393 (407)
T PRK09064 366 -RGTERLRITPTPFHTDEMIDHLVEALVE 393 (407)
T ss_pred -CCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 1236799999998888877777777764
No 72
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.85 E-value=2.3e-19 Score=172.16 Aligned_cols=242 Identities=17% Similarity=0.193 Sum_probs=158.8
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
..+.++++++.+++++|.++.+++++|++|+..++ .+++|||+|+++++.|+.....+.
T Consensus 85 ~~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 164 (397)
T PRK06939 85 TQDLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQ 164 (397)
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCCCCHHHHHHH
Confidence 34678999999999999888999999988887544 588999999999987765421111
Q ss_pred -----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----c-----ccCCCeEEEecccc
Q 019543 112 -----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----P-----LELGADIVMHSATK 153 (339)
Q Consensus 112 -----------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~-----~~~~~Di~~~S~sK 153 (339)
++|.++|++||++||+|++|+.+.... . +..+.|++++|+||
T Consensus 165 i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK 244 (397)
T PRK06939 165 LKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGK 244 (397)
T ss_pred HHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHH
Confidence 899999999999999999997654321 1 11246899999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
+++|+ .+|++++++ ++++.++.... .++...++..++.+...++.+ ....++..++.+++.+.|+.+. ++
T Consensus 245 ~~~g~---r~G~v~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~ 319 (397)
T PRK06939 245 ALGGA---SGGYTAGRK-EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAAG-FT 319 (397)
T ss_pred HhCcc---CceEEEeCH-HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CC
Confidence 99642 478998874 67777765422 123333444333333333332 3556667788888888887652 21
Q ss_pred EEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCC
Q 019543 229 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 308 (339)
Q Consensus 229 ~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g 308 (339)
. .+ +.++++++.+++.....+|++.|...|+.+. +.. .|.. +
T Consensus 320 ~--~~----------------~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~-~~~-----~~~~------~-------- 361 (397)
T PRK06939 320 L--GP----------------GEHPIIPVMLGDAKLAQEFADRLLEEGVYVI-GFS-----FPVV------P-------- 361 (397)
T ss_pred c--CC----------------CCCCEEEEEECCHHHHHHHHHHHHHCCceEe-eeC-----CCCC------C--------
Confidence 1 11 1345666666554456778888877688776 321 1110 0
Q ss_pred CCCCeEEEEeccCC----HHHHHHHHHHHHhcC
Q 019543 309 LTEDLVRISVGIED----VNDLISDLDKALRTG 337 (339)
Q Consensus 309 ~~~~~lRisvg~e~----~~~li~~l~~al~~~ 337 (339)
-..+.||++++..+ .++.++.|.++++++
T Consensus 362 ~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 362 KGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred CCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 02367999987643 444455555555544
No 73
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.85 E-value=3e-19 Score=168.32 Aligned_cols=243 Identities=21% Similarity=0.209 Sum_probs=166.0
Q ss_pred CCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 52 SGNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
+.++..+++++.+++++|+++++++++|++++.+ +.++++|||+|+++++.|......+.
T Consensus 43 ~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~le~ 122 (349)
T cd06454 43 GTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLEK 122 (349)
T ss_pred CCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecCCCHHHHHH
Confidence 4578899999999999999989999999999875 44578999999998876654331111
Q ss_pred -----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---------cccCCCeEEEecccc
Q 019543 112 -----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATK 153 (339)
Q Consensus 112 -----------------------------~~I~~la~~~g~~livD~a~a~g~~~~---------~~~~~~Di~~~S~sK 153 (339)
++|+++|++||+++|+|++|+.|.... ....+.|++++|+||
T Consensus 123 ~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK 202 (349)
T cd06454 123 LLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGK 202 (349)
T ss_pred HHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechh
Confidence 899999999999999999998664321 123467999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHHHh--cCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
++++ .||+++.++ ++.+.++..... .+..+++...+.+...++.+ ..+.++..++.+++.+.|+++ ++.
T Consensus 203 ~~~~----~gG~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 276 (349)
T cd06454 203 AFGA----VGGYIAGSK-ELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL-GFP 276 (349)
T ss_pred hhcc----cCCEEECCH-HHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCc
Confidence 9985 357887764 666666554332 23456665544444444443 445667778888888888765 322
Q ss_pred EEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCC
Q 019543 229 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 308 (339)
Q Consensus 229 ~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g 308 (339)
. ++ ...+.++++.+.+.....++.+.|...|+.++.+...+ .+
T Consensus 277 ~--~~---------------~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~---~~----------------- 319 (349)
T cd06454 277 V--GG---------------SPSHIIPPLIGDDPAKAVAFSDALLERGIYVQAIRYPT---VP----------------- 319 (349)
T ss_pred c--cC---------------CCCCcEEEEeCCChHHHHHHHHHHHhCCceEEEecCCc---cC-----------------
Confidence 1 11 01233445544433345678888776687766432100 00
Q ss_pred CCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 309 LTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 309 ~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
...+.||++++....++.++++.++|++.
T Consensus 320 ~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 320 RGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 12478999999888888888898888764
No 74
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.84 E-value=5.9e-19 Score=166.83 Aligned_cols=239 Identities=20% Similarity=0.210 Sum_probs=164.9
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
..+...++++.++++++.+..+++++|+.++.. +..+++|||+|+++++.|......+.
T Consensus 59 ~~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~ 138 (360)
T TIGR00858 59 NSPLHEELEEELAEWKGTEAALLFSSGYLANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERL 138 (360)
T ss_pred CcHHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHHH
Confidence 356788999999999998899999999887764 44578999999998887654331111
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C--c------c-cCCCeEEEeccccc
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R--P------L-ELGADIVMHSATKF 154 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~-~--~------~-~~~~Di~~~S~sK~ 154 (339)
++|.++|+++|+++|+|++|+.+.+. . + . +.+.+|+++|+||+
T Consensus 139 ~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~ 218 (360)
T TIGR00858 139 LEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKA 218 (360)
T ss_pred HHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhh
Confidence 88999999999999999999866432 1 1 1 23568999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
+++. ||++++++ ++.+.+..... .++...++...+.+...++ ..+.+.++..++.+++.+.|++++ ++
T Consensus 219 ~~~~----gG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~- 291 (360)
T TIGR00858 219 LGSY----GAYVAGSQ-ALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG-FT- 291 (360)
T ss_pred hhcc----CcEEEcCH-HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-Cc-
Confidence 9853 47888764 67776654322 1234455554433333333 234556777788889999998753 32
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 309 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~ 309 (339)
+ +| ..++++++.+++.....+|.+.|...|+.++.+..... + -
T Consensus 292 ~-~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~---~-----------------~ 334 (360)
T TIGR00858 292 L-MP----------------SCTPIVPVIIGDNASALALAEELQQQGIFVGAIRPPTV---P-----------------A 334 (360)
T ss_pred c-CC----------------CCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCC---C-----------------C
Confidence 1 11 14668888886554566888888777888765322100 0 0
Q ss_pred CCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 310 TEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 310 ~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..+.+|+|++..+.++.++.+.++|+
T Consensus 335 ~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 335 GTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 23579999999887887777777764
No 75
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.84 E-value=8.6e-19 Score=167.39 Aligned_cols=241 Identities=22% Similarity=0.218 Sum_probs=166.7
Q ss_pred CCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 52 SGNPTRDALESLLAKLDKADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
+..+..++++++++++++.+..+++++|+.++..+ ..+++|||+|+++++.|+.....+.
T Consensus 81 g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~ 160 (385)
T PRK05958 81 GNSPAHEALEEELAEWFGAERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEA 160 (385)
T ss_pred CCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHH
Confidence 34577899999999999988899999998887654 4578999999999887765432111
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---------ccc-CCCeEEEeccccc
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---------PLE-LGADIVMHSATKF 154 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~~---------~~~-~~~Di~~~S~sK~ 154 (339)
++|.++|++||+++|+|++|+.|.... .+. ...+|++.|+||+
T Consensus 161 ~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~ 240 (385)
T PRK05958 161 LLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKA 240 (385)
T ss_pred HHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhh
Confidence 899999999999999999997664321 111 1235889999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
+++. ||+++++ +++.+.+..... .++...++..++++...++.+ ..+.++..++.+++.+.|+..+ ++
T Consensus 241 ~~~~----Gg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~- 313 (385)
T PRK05958 241 LGSS----GAAVLGS-ETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG-FQ- 313 (385)
T ss_pred cccC----CcEEEcC-HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CC-
Confidence 9843 4777766 466666543321 223445666555444445433 3456667778888888888652 22
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 309 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~ 309 (339)
+ .+ +.+++++|.+++.....+|.+.|.+.|+.++.+.. +.. + -
T Consensus 314 ~-~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~------~~~------~--------~ 356 (385)
T PRK05958 314 L-MD----------------SQSAIQPLIVGDNERALALAAALQEQGFWVGAIRP------PTV------P--------A 356 (385)
T ss_pred c-CC----------------CCCCEEEEEeCCHHHHHHHHHHHHHCCceEecccC------CCC------C--------C
Confidence 1 11 24678899886655567888888877888764221 100 0 0
Q ss_pred CCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 310 TEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 310 ~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.++.+|||++....++.++.+.++|++
T Consensus 357 ~~~~lRis~~~~~~~~~i~~~l~~l~~ 383 (385)
T PRK05958 357 GTSRLRITLTAAHTEADIDRLLEALAE 383 (385)
T ss_pred CCceEEEEecCCCCHHHHHHHHHHHHh
Confidence 236799999988888888888888765
No 76
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.83 E-value=6.8e-19 Score=167.78 Aligned_cols=205 Identities=16% Similarity=0.114 Sum_probs=135.0
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchH-------------------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTD------------------------- 107 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~------------------------- 107 (339)
+|...++++.+|+++|.+.+++++||++|+.+++ +++++||.|+++.+.|...+
T Consensus 50 ~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~ 129 (370)
T TIGR02539 50 KPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDP 129 (370)
T ss_pred chHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCH
Confidence 3467888889999999999999999999998644 57899999999766432211
Q ss_pred ----HHH---------H-------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccc
Q 019543 108 ----RLL---------S-------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 154 (339)
Q Consensus 108 ----~~~---------~-------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~ 154 (339)
..+ . ++|.++|++||+++++|++|+.|... .....+.|++++|+||+
T Consensus 130 ~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~ 209 (370)
T TIGR02539 130 EGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKS 209 (370)
T ss_pred HHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeCccc
Confidence 111 1 89999999999999999999987543 33345789999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHhcC--------CCCChHHHHHHHhchhhHHH---HHHHHHHHHHHHHHHHhC
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNAEG--------SGLAPFDCWICLRGVKTMAL---RVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~--------~~~~~~~a~~~~~~l~~~~~---r~~~~~~~a~~l~~~L~~ 223 (339)
+++++ ..|++++++ ++++.++.....+. .......+..+...++...+ +..+..++++++++.|++
T Consensus 210 ~~~~g--~~G~l~~~~-~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~ 286 (370)
T TIGR02539 210 MAASG--PCGVLGMSE-EWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELED 286 (370)
T ss_pred ccCCC--CEEEEEECH-HHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98543 257888875 68888776543211 11111112222233433222 233445556789999988
Q ss_pred CCCceEE-ecCCCCCCCchHhHhhhcCCCcceEEEeeCC--------HHHHHHHHccCCcceee
Q 019543 224 HPRVKKV-NYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--------LALSKHVVETTKYFSIT 278 (339)
Q Consensus 224 ~~~i~~v-~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--------~~~~~~~~~~L~~~~i~ 278 (339)
.+ +..+ .+| +.++++.+.++. ...+..+.+.|++.||.
T Consensus 287 ~g-~~~~~~~~----------------s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~ 333 (370)
T TIGR02539 287 IG-FIQLGQKP----------------KEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIH 333 (370)
T ss_pred CC-cEEEccCC----------------CcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCc
Confidence 74 4322 112 245677666532 12345688888877773
No 77
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.83 E-value=4.9e-19 Score=170.83 Aligned_cols=245 Identities=19% Similarity=0.172 Sum_probs=163.1
Q ss_pred CCchHHHHHH----HHHhHhCCCeEEE-cCcHHHHHHH-HHHhcCC-------------------------------CCE
Q 019543 53 GNPTRDALES----LLAKLDKADRALC-FTSGMAALAA-VTHLLGT-------------------------------GEE 95 (339)
Q Consensus 53 ~~~~~~~le~----~la~~~g~~~~l~-~~sG~~A~~~-il~ll~~-------------------------------GD~ 95 (339)
+...++++|. +..++||++++-+ ..||+.||.+ +.++++| ||+
T Consensus 89 g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~ 168 (493)
T PRK13580 89 GCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQR 168 (493)
T ss_pred CCchHHHHHHHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCE
Confidence 4566666664 4456899998766 4599999986 4558876 799
Q ss_pred EEEcCCCccchH---------------------------------HHHH--------------------HHHHHHHHHcC
Q 019543 96 IVAGDDLYGGTD---------------------------------RLLS--------------------RKIAEMAHAHG 122 (339)
Q Consensus 96 Vi~~~~~y~~~~---------------------------------~~~~--------------------~~I~~la~~~g 122 (339)
|+.-+...+|.. ..+. ++|.++|++||
T Consensus 169 i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~g 248 (493)
T PRK13580 169 LLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVG 248 (493)
T ss_pred EEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcC
Confidence 988754322210 0010 99999999999
Q ss_pred CEEEEeCCcCCCCCc-Ccc------cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH-HhcCCCCChHHHH
Q 019543 123 ALLLVDNSIMSPVLS-RPL------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAEGSGLAPFDCW 194 (339)
Q Consensus 123 ~~livD~a~a~g~~~-~~~------~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-~~~~~~~~~~~a~ 194 (339)
+++++|++|+.|+.+ +.. ..++||+++|++|+|.|+ .||+|++++ ++.+.+...+ .++|+.++|..++
T Consensus 249 A~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP---~GG~I~~~~-~l~~~L~~a~P~i~gg~l~p~iAA 324 (493)
T PRK13580 249 AVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGP---RGGLVLAKK-EYADAVDKGCPLVLGGPLPHVMAA 324 (493)
T ss_pred CEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCC---CeEEEEecH-HHHHHHhhCCCcccCCCccHHHHH
Confidence 999999999998764 111 136899999999999754 479999875 6777774332 2567888886665
Q ss_pred HHHhchh----hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHH-HHH
Q 019543 195 ICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSK-HVV 269 (339)
Q Consensus 195 ~~~~~l~----~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~-~~~ 269 (339)
.+....+ ...++.++..+|+++|++.|++.. +..+. + .+.++|+++.+++...+. .+.
T Consensus 325 ~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G-~~vv~--g--------------gTdshIV~V~lg~~~~~g~~a~ 387 (493)
T PRK13580 325 KAVALAEARTPEFQKYAQQVVDNARALAEGFLKRG-ARLVT--G--------------GTDNHLVLIDVTSFGLTGRQAE 387 (493)
T ss_pred HHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcC-CCccC--C--------------CCCCCEEEEEeCCHHHHHHHHH
Confidence 5443222 124578888999999999998763 21111 0 135789999998776544 566
Q ss_pred ccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEecc--------CCHHHHHHHHHHHHh
Q 019543 270 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--------EDVNDLISDLDKALR 335 (339)
Q Consensus 270 ~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~--------e~~~~li~~l~~al~ 335 (339)
+.|.+.||.++. +..|.+..- ...+..|||++.. ++++.+.+.|.++++
T Consensus 388 ~~L~e~GI~vn~------i~~Ptvp~g-----------~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 388 SALLDAGIVTNR------NSIPSDPNG-----------AWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLS 444 (493)
T ss_pred HHHHHCCeEEcc------ccCCCCCCC-----------CCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHH
Confidence 678888887662 334543100 0125679999876 445555555555554
No 78
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.3e-18 Score=166.43 Aligned_cols=239 Identities=18% Similarity=0.163 Sum_probs=161.0
Q ss_pred CCcccCCCCchHHHHHHHHHhHhC----CCe-EEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH--------
Q 019543 46 PYDYTRSGNPTRDALESLLAKLDK----ADR-ALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS-------- 111 (339)
Q Consensus 46 ~~~y~r~~~~~~~~le~~la~~~g----~~~-~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~-------- 111 (339)
.|..+++.-.+++++.+.+.+.+| .++ +++++++++|+.. +++++.|||+|++++|.|.....++.
T Consensus 60 ~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~ 139 (393)
T COG0436 60 HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVP 139 (393)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEE
Confidence 344444444556666666666666 233 7788888999985 66799999999999998865543222
Q ss_pred ----------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-----cc
Q 019543 112 ----------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-----PL 140 (339)
Q Consensus 112 ----------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-----~~ 140 (339)
++|+++|++||++||.|++|..-.+.. .+
T Consensus 140 v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~ 219 (393)
T COG0436 140 VPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSIL 219 (393)
T ss_pred EeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHh
Confidence 999999999999999999996544321 11
Q ss_pred cC----CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh------hHHHHHHHH
Q 019543 141 EL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK------TMALRVEKQ 210 (339)
Q Consensus 141 ~~----~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~------~~~~r~~~~ 210 (339)
.. ..-|+++||||.++.+|++ .||++++++++++.+...+.....+.+.....++..+|+ ......++.
T Consensus 220 ~~~~~~~~~i~i~s~SK~~~mtGwR-vG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~ 298 (393)
T COG0436 220 ELAGARDRTITINSFSKTYGMTGWR-IGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEY 298 (393)
T ss_pred hcCCCcceEEEEecccccccccccc-eeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHH
Confidence 11 1248889999999998876 567777756788888766665555555544433333332 334444667
Q ss_pred HHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceE-EEeeCCHHHHHHHHccC-CcceeecccCCcccce
Q 019543 211 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL-SFLTGSLALSKHVVETT-KYFSITVSFGSVKSLI 288 (339)
Q Consensus 211 ~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~iv-s~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~~ 288 (339)
.++.+.+.+.|++.++++.+..| .|+.+ ++.+....+..+|+..| ++.|++|..|..+..
T Consensus 299 ~~rrd~l~~~l~~~~g~~~~~~p-----------------~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~- 360 (393)
T COG0436 299 RERRDLLVEALNEIGGLSVVKPP-----------------EGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGE- 360 (393)
T ss_pred HHHHHHHHHHHHhcCCeeeccCC-----------------CeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCC-
Confidence 88899999999998877654444 23343 44454434456777765 566888887754321
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEeccCC
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGIED 322 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~ 322 (339)
+ ..++.+|||+....
T Consensus 361 --~-----------------~g~~~vRis~~~~~ 375 (393)
T COG0436 361 --P-----------------PGEGYVRLSLATSE 375 (393)
T ss_pred --C-----------------CCCCeEEEEEecCH
Confidence 0 14588999998765
No 79
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.83 E-value=1.4e-18 Score=166.21 Aligned_cols=245 Identities=20% Similarity=0.140 Sum_probs=160.7
Q ss_pred CcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
|.+.++..+.++++++++++++|.+.+++++||++|+.. +..+++|||+|+++++.|+.....+.
T Consensus 70 ~~~~~g~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~ 149 (385)
T TIGR01825 70 VRTIAGTLRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYKHADM 149 (385)
T ss_pred cCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeCCCCH
Confidence 334445567899999999999998889999999888874 44588999999999887765432111
Q ss_pred ---------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---------cccCCCeEEEe
Q 019543 112 ---------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMH 149 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---------~~~~~~Di~~~ 149 (339)
++|.++|++||+++|+|++|+.+.... ....+.|+++.
T Consensus 150 ~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 229 (385)
T TIGR01825 150 DDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVG 229 (385)
T ss_pred HHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEE
Confidence 889999999999999999998764421 12235689999
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHhCC
Q 019543 150 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 150 S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L~~~ 224 (339)
||||++++. ||++++++ ++.+.+..... .+++..++...+.+..+++.+ ....++..++.+++.+.|++.
T Consensus 230 s~sK~~~~~----gG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 304 (385)
T TIGR01825 230 TLSKAIGVV----GGYAAGHK-ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL 304 (385)
T ss_pred eccHHhhcC----CCEEecCH-HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999843 57887664 67777765432 223444554433333334332 234555667788888888764
Q ss_pred CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHH
Q 019543 225 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVR 304 (339)
Q Consensus 225 ~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~ 304 (339)
+++. ++ ..++++++.++......+|++.|...|+.++.+. .|.. +
T Consensus 305 -g~~~--~~----------------~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~------~~~~------~---- 349 (385)
T TIGR01825 305 -GYDT--GG----------------SETPITPVVIGDEKAAQEFSRRLFDEGIFAQSIV------FPTV------P---- 349 (385)
T ss_pred -CCCC--CC----------------CCCCEEEEEECCHHHHHHHHHHHHHCCcEEcccC------CCCC------C----
Confidence 3321 11 1345777776654455678888766688765222 1110 0
Q ss_pred HhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 305 QARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 305 ~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.....||+++.+...++.++.+.++++
T Consensus 350 ----~~~~~iRi~~~~~~~~e~i~~~~~~l~ 376 (385)
T TIGR01825 350 ----RGTARIRNIPTAEHTKDDLDQALDAYE 376 (385)
T ss_pred ----CCCceEEEEEcCCCCHHHHHHHHHHHH
Confidence 133679999876666655555555554
No 80
>PLN02721 threonine aldolase
Probab=99.83 E-value=1.2e-18 Score=164.68 Aligned_cols=237 Identities=17% Similarity=0.162 Sum_probs=160.5
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcC-CCCEEEEcCCCccchHH----------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLG-TGEEIVAGDDLYGGTDR---------------------- 108 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~-~GD~Vi~~~~~y~~~~~---------------------- 108 (339)
.+|...+||+.+++++|.+.++++++|++++.. +..+++ +||+|+++++.|.....
T Consensus 38 ~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 117 (353)
T PLN02721 38 YDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGT 117 (353)
T ss_pred CCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCCcCCC
Confidence 467789999999999999989999999888764 444566 99999999887532110
Q ss_pred --------HH---------H-----------------------HHHHHHHHHcCCEEEEeCCcCCCCC---c-Cc--ccC
Q 019543 109 --------LL---------S-----------------------RKIAEMAHAHGALLLVDNSIMSPVL---S-RP--LEL 142 (339)
Q Consensus 109 --------~~---------~-----------------------~~I~~la~~~g~~livD~a~a~g~~---~-~~--~~~ 142 (339)
.+ + ++|.++|++||+++++|++|..+.. . .+ ...
T Consensus 118 ~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~ 197 (353)
T PLN02721 118 MDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVK 197 (353)
T ss_pred cCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhh
Confidence 00 0 6899999999999999999864421 1 11 123
Q ss_pred CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCCh--HHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Q 019543 143 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP--FDCWICLRGVKTMALRVEKQQDNAQKIAEF 220 (339)
Q Consensus 143 ~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~--~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~ 220 (339)
++|.++.|+||+++++ .||+++.+ +++++.+...+..++..+.. ..++.+..+++...+++++..++.+++.+.
T Consensus 198 ~~d~~~~s~sK~l~~~---~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 273 (353)
T PLN02721 198 AADSVSVCLSKGLGAP---VGSVIVGS-KSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAEG 273 (353)
T ss_pred hCCEEEEecccccCCc---eeeEEecC-HHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999853 45555554 57777777666544433332 233334445666555666667788899999
Q ss_pred HhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccCCcceeecccCCcccceeccccccCCC
Q 019543 221 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHAS 298 (339)
Q Consensus 221 L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~ 298 (339)
|++++++.....+ ..++++++.+... .....+++.|...|+.+..+
T Consensus 274 L~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~---------------- 321 (353)
T PLN02721 274 LNQIKGLRVNVAA----------------VETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPG---------------- 321 (353)
T ss_pred HHhCCCcEEecCC----------------ccceEEEEEccCCccccHHHHHHHHHhCCcEEecC----------------
Confidence 9988776421111 1356788877532 23567888887777766532
Q ss_pred CCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 299 IPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 299 ~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
....||++++....++.++.+.++|++
T Consensus 322 -----------~~~~lR~~~~~~~~~~~i~~~~~~l~~ 348 (353)
T PLN02721 322 -----------NSSRIRVVTHHQISDSDVQYTLSCFQQ 348 (353)
T ss_pred -----------CCceEEEEecCcCCHHHHHHHHHHHHH
Confidence 235799999866666666666666653
No 81
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.82 E-value=1.9e-18 Score=165.67 Aligned_cols=213 Identities=19% Similarity=0.183 Sum_probs=144.6
Q ss_pred cccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchH-------------------
Q 019543 48 DYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTD------------------- 107 (339)
Q Consensus 48 ~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~------------------- 107 (339)
...+...|.++++|+.+|+++|.+++++++||++|+.+ +.+++++||+|+++.+.|....
T Consensus 56 ~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~ 135 (387)
T PRK09331 56 RLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYP 135 (387)
T ss_pred ccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCc
Confidence 34455678899999999999999999999999999975 4558899999999876433221
Q ss_pred ----------HHH---------H-------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEE
Q 019543 108 ----------RLL---------S-------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVM 148 (339)
Q Consensus 108 ----------~~~---------~-------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~ 148 (339)
..+ + ++|.++|++||+++++|++|+.|.. .+...+++|+++
T Consensus 136 ~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~ 215 (387)
T PRK09331 136 EYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIV 215 (387)
T ss_pred CCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEE
Confidence 000 1 8999999999999999999998864 233456899999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHHHH--------hcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHH
Q 019543 149 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--------AEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKI 217 (339)
Q Consensus 149 ~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--------~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l 217 (339)
+|++|++++++ .+|++++++ ++++.++...+ .+++.+++..++.+..+++ ....++++..++++++
T Consensus 216 ~s~~K~l~~~~--~~G~l~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l 292 (387)
T PRK09331 216 GSGHKSMAASA--PSGVLATTE-EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWF 292 (387)
T ss_pred eeCcccccCCC--CEEEEEECH-HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998653 468888875 66666654321 1333343322222222333 3334566677889999
Q ss_pred HHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--------HHHHHHHccCCcceee
Q 019543 218 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--------ALSKHVVETTKYFSIT 278 (339)
Q Consensus 218 ~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--------~~~~~~~~~L~~~~i~ 278 (339)
++.|+++++++.+. +. + +.++++.|..... ..+.+|.+.|++.|+.
T Consensus 293 ~~~L~~l~g~~~~~-~~-~-------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~ 346 (387)
T PRK09331 293 VDELEKIEGFKQLG-EK-P-------------RNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIH 346 (387)
T ss_pred HHHHhcCCCEEEec-cC-c-------------CcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCce
Confidence 99999998876432 11 0 1245666654321 1124577788776664
No 82
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.82 E-value=1.2e-18 Score=168.49 Aligned_cols=209 Identities=25% Similarity=0.259 Sum_probs=141.5
Q ss_pred CCchHHHHHH----HHHhHhCCCeE-EEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchH-------------------
Q 019543 53 GNPTRDALES----LLAKLDKADRA-LCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTD------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~----~la~~~g~~~~-l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~------------------- 107 (339)
+++.++.+|+ .+++++|.+.+ ++++||++|+.+++ .+++|||+|+++++.|.+..
T Consensus 65 ~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (416)
T PRK00011 65 GCEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYG 144 (416)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCceeeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecC
Confidence 3456777777 89999998866 66688999987544 58899999999987664210
Q ss_pred --------------HHHH--------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-----CcccCCCeEEE
Q 019543 108 --------------RLLS--------------------RKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVM 148 (339)
Q Consensus 108 --------------~~~~--------------------~~I~~la~~~g~~livD~a~a~g~~~-----~~~~~~~Di~~ 148 (339)
..+. ++|.++|++||+++|+|++|+.|... ..+. ++|+++
T Consensus 145 ~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~ 223 (416)
T PRK00011 145 VDEETGLIDYDEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVT 223 (416)
T ss_pred cCcccCCcCHHHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEE
Confidence 0010 89999999999999999999766431 2334 679999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHHHHh--cCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHHHh
Q 019543 149 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 149 ~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~L~ 222 (339)
+|++|+++|+ .||+++++++++.++++..... ++....+..+++....++ .++.+.+++.++++++.+.|+
T Consensus 224 ~S~~K~l~g~---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 300 (416)
T PRK00011 224 TTTHKTLRGP---RGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALA 300 (416)
T ss_pred ecCCcCCCCC---CceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999643 4788988766777777665432 122222233322222212 346778888999999999998
Q ss_pred CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHH-HHHHHHccCCcceeecccC
Q 019543 223 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA-LSKHVVETTKYFSITVSFG 282 (339)
Q Consensus 223 ~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~-~~~~~~~~L~~~~i~v~~G 282 (339)
+. +++.. +. .+.++++++.+++.. ...++.+.|+..|+.++.+
T Consensus 301 ~~-g~~~~--~~--------------~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~ 344 (416)
T PRK00011 301 ER-GFRVV--SG--------------GTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKN 344 (416)
T ss_pred hC-CCeee--ec--------------CCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccC
Confidence 76 44321 11 113578888875321 3356777777778887643
No 83
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.82 E-value=3.7e-19 Score=172.29 Aligned_cols=167 Identities=23% Similarity=0.336 Sum_probs=133.0
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCC---ccchHHHHH-------------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDL---YGGTDRLLS------------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~---y~~~~~~~~------------------- 111 (339)
++.++.+|+.+++++|++++++|+||++|+.+++..+.+||+||+++.. |++...+..
T Consensus 121 g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~~~~ 200 (454)
T TIGR00474 121 GSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNTLAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTNRTH 200 (454)
T ss_pred chHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCCCCC
Confidence 3567999999999999999999999999998766778999999998864 544432211
Q ss_pred ----------------------------------HHHHHHHHHcCCEEEEeCCcCC------------CCCcCcccCCCe
Q 019543 112 ----------------------------------RKIAEMAHAHGALLLVDNSIMS------------PVLSRPLELGAD 145 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g~~livD~a~a~------------g~~~~~~~~~~D 145 (339)
++|+++||+||+++++|++.+. +...++...|+|
T Consensus 201 l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaD 280 (454)
T TIGR00474 201 LKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVD 280 (454)
T ss_pred HHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCC
Confidence 8899999999999999986332 111244567999
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHH----------------HHHHhcCCCCChHHHHHHHhchhhHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELY----------------FLQNAEGSGLAPFDCWICLRGVKTMALRVEK 209 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~----------------~~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~ 209 (339)
++++|.+|+++|| .+|++++++ +++++++ .+....+..++|..++..+.+|+++..|+++
T Consensus 281 iv~fSg~K~LgGp---~~G~i~g~~-~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~ 356 (454)
T TIGR00474 281 LVTFSGDKLLGGP---QAGIIVGKK-ELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEE 356 (454)
T ss_pred EEEecCccccCCC---eEEEEEECH-HHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHH
Confidence 9999999999986 489998875 5554422 1122346678888899999999999999999
Q ss_pred HHHHHHHHHHHHhCC
Q 019543 210 QQDNAQKIAEFLASH 224 (339)
Q Consensus 210 ~~~~a~~l~~~L~~~ 224 (339)
+++++++++++|++.
T Consensus 357 ~~~~A~~la~~L~~~ 371 (454)
T TIGR00474 357 LRARAERLAKRLKAA 371 (454)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999875
No 84
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.81 E-value=5.8e-18 Score=162.40 Aligned_cols=251 Identities=14% Similarity=0.108 Sum_probs=161.5
Q ss_pred CcccCCCCchHHHHHHHHHhHhCC----Ce-EEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH---------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKA----DR-ALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS--------- 111 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~----~~-~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~--------- 111 (339)
|....+..+.++++++.+++++|. ++ .++++++++++..+ ..+++|||+|++++|.|......++
T Consensus 61 Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v 140 (389)
T PRK05957 61 YQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILV 140 (389)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEe
Confidence 333334446788999999988874 33 44555557888754 4578999999999998865533222
Q ss_pred ------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-----ccc---
Q 019543 112 ------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-----PLE--- 141 (339)
Q Consensus 112 ------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-----~~~--- 141 (339)
++|+++|++||++||+|++|+...+.. ...
T Consensus 141 ~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 220 (389)
T PRK05957 141 PTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPG 220 (389)
T ss_pred ecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCC
Confidence 889999999999999999987433221 111
Q ss_pred -CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHH
Q 019543 142 -LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQK 216 (339)
Q Consensus 142 -~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~ 216 (339)
..-.|++.||||.++.+|. +.|++++++ ++++++.......+...+......+...|+ .+.+.+++..++.+.
T Consensus 221 ~~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~ 298 (389)
T PRK05957 221 SGNHTISLYSLSKAYGFASW-RIGYMVIPI-HLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQI 298 (389)
T ss_pred ccCcEEEEecchhhccCccc-eeEEEecCH-HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 1124889999999987775 466777764 788888877665554555444444444343 245555666777888
Q ss_pred HHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC-cceeecccCCcccceecccccc
Q 019543 217 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMS 295 (339)
Q Consensus 217 l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~~ 295 (339)
+.+.|+.++++..+.-| ..+..+++.+.......+|++.|. ..|+.+..|..+. +
T Consensus 299 l~~~L~~~~~~~~~~~~----------------~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~----~---- 354 (389)
T PRK05957 299 LLKSLGQLQDRCTLHPA----------------NGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFG----M---- 354 (389)
T ss_pred HHHHHHhcCCCccccCC----------------CeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhC----C----
Confidence 88888877653212111 124567777643333567777764 5788888765321 0
Q ss_pred CCCCCHHHHHhCCCCCCeEEEEeccCCHH---HHHHHHHHHHhc
Q 019543 296 HASIPVEVRQARGLTEDLVRISVGIEDVN---DLISDLDKALRT 336 (339)
Q Consensus 296 h~~~~~~~~~~~g~~~~~lRisvg~e~~~---~li~~l~~al~~ 336 (339)
..++.+|||++..+.+ +-++.|.+++++
T Consensus 355 -------------~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 355 -------------KNGCYLRIAYGALQKATAKEGIERLVQGLKT 385 (389)
T ss_pred -------------CCCCEEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 0246899999865544 445555555554
No 85
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.81 E-value=7.1e-18 Score=162.37 Aligned_cols=245 Identities=17% Similarity=0.161 Sum_probs=158.2
Q ss_pred chHHHHHHHHHhHhCC-C--eEEEcCcHHHHHHHHHH-h----cCCCCEEEEcCCCccchHH----HHH-----------
Q 019543 55 PTRDALESLLAKLDKA-D--RALCFTSGMAALAAVTH-L----LGTGEEIVAGDDLYGGTDR----LLS----------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~-~--~~l~~~sG~~A~~~il~-l----l~~GD~Vi~~~~~y~~~~~----~~~----------- 111 (339)
...+++++.+++++|+ + .+++++|+++++..++. + ++|||+|+++++.|++... +.+
T Consensus 63 ~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 142 (401)
T PRK10874 63 ARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPL 142 (401)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEec
Confidence 4567889999999997 3 35556666888876543 4 4799999999998765421 111
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEecccc
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATK 153 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK 153 (339)
++|+++|+++|+++++|++|+.|... +....++|++++|++|
T Consensus 143 ~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K 222 (401)
T PRK10874 143 GADRLPDVDLLPELITPRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHK 222 (401)
T ss_pred CCCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEeccc
Confidence 99999999999999999999876542 2234578999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHH---------------------HhcCCCCChHHHHHHHhchhhH-----HHHH
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQ---------------------NAEGSGLAPFDCWICLRGVKTM-----ALRV 207 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~---------------------~~~~~~~~~~~a~~~~~~l~~~-----~~r~ 207 (339)
.+|.+| .|+++.++ ++.+.+.... ++...+.+......+..+++.+ ....
T Consensus 223 ~~gp~G---~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~ 298 (401)
T PRK10874 223 LYGPTG---IGVLYGKS-ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAE 298 (401)
T ss_pred ccCCCc---cEEEEEch-HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHH
Confidence 776433 37888775 5555543211 0111122222222222233332 2224
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccc
Q 019543 208 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSL 287 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~ 287 (339)
++..+.++++.+.|+++++++.+..| .+++++|.+.+.. ..++.+.|...||.++.|...+
T Consensus 299 ~~~~~l~~~l~~~l~~~~g~~~~~~~-----------------~~~i~~~~~~~~~-~~~~~~~L~~~gI~v~~g~~~~- 359 (401)
T PRK10874 299 SWSRSLATLAEDALAKLPGFRSFRCQ-----------------DSSLLAFDFAGVH-HSDLVTLLAEYGIALRAGQHCA- 359 (401)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCC-----------------CCcEEEEEECCcC-HHHHHHHHHHCCcEEeccccch-
Confidence 44456678888888888876532211 3568888875432 3466677777888888664211
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
. .....+|. .+.||+|++..++++.++.+.++|++
T Consensus 360 -----~--------~~~~~~g~-~~~iRiS~~~~nt~edid~ll~al~~ 394 (401)
T PRK10874 360 -----Q--------PLLAALGV-TGTLRASFAPYNTQSDVDALVNAVDR 394 (401)
T ss_pred -----H--------HHHHHhCC-CCEEEEEecccCCHHHHHHHHHHHHH
Confidence 1 11112342 37899999998888888888888864
No 86
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.81 E-value=5.7e-18 Score=160.83 Aligned_cols=240 Identities=19% Similarity=0.177 Sum_probs=154.5
Q ss_pred CCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchH-----------------------
Q 019543 52 SGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTD----------------------- 107 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~----------------------- 107 (339)
..+|..+++|+.+++++|.+++++++++++|+.+++ .+++|||+|+++++.|....
T Consensus 41 ~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 120 (361)
T cd06452 41 IEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHI 120 (361)
T ss_pred ccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCccc
Confidence 356889999999999999988998989999987544 57899999999876433221
Q ss_pred ------HHH---------H-------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEeccc
Q 019543 108 ------RLL---------S-------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSAT 152 (339)
Q Consensus 108 ------~~~---------~-------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~s 152 (339)
..+ + ++|.++|+++|+++++|++|+.|.. ......++|++++|+|
T Consensus 121 d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 200 (361)
T cd06452 121 TPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGH 200 (361)
T ss_pred CHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCCEEEecCC
Confidence 001 1 8999999999999999999987754 3334567899999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHh--------cCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHH
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--------~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L 221 (339)
|++++++ .+|++++++ +++++++..+.. .+....+...+.+..+++.+ ..+..+..++++++.+.|
T Consensus 201 K~l~~~~--~~G~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L 277 (361)
T cd06452 201 KSMAASA--PIGVLATTE-EWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAEL 277 (361)
T ss_pred ccccCCC--CeEEEEECH-HHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998543 477888874 677777554321 12222221222223333332 233444456678999999
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--------HHHHHHHccCCcceeecccCCcccceecccc
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--------ALSKHVVETTKYFSITVSFGSVKSLISMPCF 293 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~ 293 (339)
+++++++.+. +. + +..+++.|..... ....++.+.|++.||.+. .+
T Consensus 278 ~~l~g~~v~~-~~-~-------------~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~---------~~-- 331 (361)
T cd06452 278 EKIEGIKQLG-EK-P-------------KNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGI---------KP-- 331 (361)
T ss_pred hcCCCeEEEC-CC-C-------------CCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEE---------cC--
Confidence 9998775332 11 1 1345666654311 112257777766676421 11
Q ss_pred ccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 294 MSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 294 ~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
| ....+|+++.- +.++.++.+.++|+.
T Consensus 332 --------------~-~~~~~ri~~~g-~~~e~~~~l~~al~~ 358 (361)
T cd06452 332 --------------G-LTRYFKLSTYG-LTWEQVEYVVDAFKE 358 (361)
T ss_pred --------------C-CceEEEEEecC-CCHHHHHHHHHHHHH
Confidence 1 23478999921 344555666666654
No 87
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.81 E-value=7.7e-18 Score=162.38 Aligned_cols=249 Identities=19% Similarity=0.162 Sum_probs=160.0
Q ss_pred CcccCCCCchHHHHHHHHHhHhCC-----CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKA-----DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------- 111 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~-----~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------- 111 (339)
|...++..++++++.+.+++.+|. +++++++++++|+..++ .+++|||+|++++|.|++....++
T Consensus 74 Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v 153 (405)
T PRK06207 74 YTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPV 153 (405)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEE
Confidence 333333445667777777777673 45777777789998654 588999999999998876542221
Q ss_pred -----------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cC---cc
Q 019543 112 -----------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SR---PL 140 (339)
Q Consensus 112 -----------------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~---~~ 140 (339)
++|+++|++||++||+||+|+...+ .. .+
T Consensus 154 ~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~ 233 (405)
T PRK06207 154 QLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHL 233 (405)
T ss_pred eccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCch
Confidence 8899999999999999999975432 11 11
Q ss_pred -cC----CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHH
Q 019543 141 -EL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQ 211 (339)
Q Consensus 141 -~~----~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~ 211 (339)
.. .--|++.||||.++.+| .+.||++++ +++++.+......++...+.+...++...|+ .++.++++..
T Consensus 234 ~~~~~~~~~vi~i~SfSK~~~lpG-lRiG~ii~~-~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 311 (405)
T PRK06207 234 RALPIDPENVITIMGPSKTESLSG-YRLGVAFGS-PAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQ 311 (405)
T ss_pred hcCCCCcCcEEEEecchhhccCcc-cceEEEEcC-HHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 11 11289999999998666 456788776 4788888777665554445444333333332 2456666677
Q ss_pred HHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCC-cceeecccCCccccee
Q 019543 212 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTK-YFSITVSFGSVKSLIS 289 (339)
Q Consensus 212 ~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~-~~~i~v~~G~~~s~~~ 289 (339)
++.+.+.+.|+.+++++ +..| ..|..+++.+.+ .....+|++.|. ..|+.+..|..+.
T Consensus 312 ~~r~~l~~~L~~~~~~~-~~~p----------------~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~--- 371 (405)
T PRK06207 312 AIRDDLLRVLRGVEGVF-VRAP----------------QAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFS--- 371 (405)
T ss_pred HHHHHHHHHHhcCCCce-ecCC----------------CeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhC---
Confidence 77788888888776543 1112 134577777753 123466887774 5688887765321
Q ss_pred ccccccCCCCCHHHHHhCCCCCCeEEEEeccCC--HHHHHHHHHHHHh
Q 019543 290 MPCFMSHASIPVEVRQARGLTEDLVRISVGIED--VNDLISDLDKALR 335 (339)
Q Consensus 290 ~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~--~~~li~~l~~al~ 335 (339)
+ ..++.+|||++.+. .++-++.|.++++
T Consensus 372 -~-----------------~~~~~~Ris~~~~~~~l~~al~rl~~~l~ 401 (405)
T PRK06207 372 -P-----------------HTADSIRLNFSQDHAAAVAAAERIAQLIE 401 (405)
T ss_pred -C-----------------CCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1 12468999999731 2233444555544
No 88
>PRK07324 transaminase; Validated
Probab=99.80 E-value=8.1e-18 Score=160.54 Aligned_cols=223 Identities=17% Similarity=0.104 Sum_probs=146.7
Q ss_pred HHHHHHHHHhHhC---CCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH---------------------
Q 019543 57 RDALESLLAKLDK---ADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS--------------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~g---~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~--------------------- 111 (339)
..+|++.++++++ .+++++++++++|+.++ ..+++|||+|+++.|.|.......+
T Consensus 64 ~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~ 143 (373)
T PRK07324 64 SPEFKEAVASLYQNVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDL 143 (373)
T ss_pred CHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCH
Confidence 4589999999874 35677788889999854 4588999999999998876543222
Q ss_pred --------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-c---cc-CCCeEEEeccccc
Q 019543 112 --------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-P---LE-LGADIVMHSATKF 154 (339)
Q Consensus 112 --------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-~---~~-~~~Di~~~S~sK~ 154 (339)
++|+++|++||+++|+|++|..-.... . .. ..-.|+++||||+
T Consensus 144 ~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~ 223 (373)
T PRK07324 144 DELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKT 223 (373)
T ss_pred HHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhh
Confidence 889999999999999999986432211 1 11 1224888999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHHHHHhCCCCceEE
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKV 230 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~~L~~~~~i~~v 230 (339)
++.+|.+ .||++++ +++++.++..+...+.+.+.+...++...++. +....+..+++.+.+.++|+.++++..
T Consensus 224 ~~~~G~R-iG~i~~~-~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~- 300 (373)
T PRK07324 224 YSLPGIR-VGWIAAN-EEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSY- 300 (373)
T ss_pred cCCccce-eEEEecC-HHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceE-
Confidence 9977654 5677775 57888888776544444555544444444432 233344456677888888887766542
Q ss_pred ecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcccceeccccccCCCCCHHHHHhCCC
Q 019543 231 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 309 (339)
Q Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~ 309 (339)
..|. .|..+++.+.......+|+++| ++.|+.+..|..+.
T Consensus 301 ~~p~----------------gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~----------------------- 341 (373)
T PRK07324 301 VKPK----------------AVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFD----------------------- 341 (373)
T ss_pred ECCC----------------ceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccC-----------------------
Confidence 2331 1233344443223455777775 56788877665321
Q ss_pred CCCeEEEEeccC
Q 019543 310 TEDLVRISVGIE 321 (339)
Q Consensus 310 ~~~~lRisvg~e 321 (339)
.++.+|||++..
T Consensus 342 ~~~~iRis~~~~ 353 (373)
T PRK07324 342 LEGHVRIGYCCD 353 (373)
T ss_pred CCCeEEEEecCC
Confidence 135799999863
No 89
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.80 E-value=8.5e-18 Score=160.15 Aligned_cols=245 Identities=21% Similarity=0.226 Sum_probs=161.6
Q ss_pred chHHHHHHHHHhHhCCC---eEEEcCcHHHHHHH-HHHhcC---CCCEEEEcCCCccchHH----HHH------------
Q 019543 55 PTRDALESLLAKLDKAD---RALCFTSGMAALAA-VTHLLG---TGEEIVAGDDLYGGTDR----LLS------------ 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~~sG~~A~~~-il~ll~---~GD~Vi~~~~~y~~~~~----~~~------------ 111 (339)
...+++++.+++++|.+ ++++++|++.|+.. +.++.. +||+|+++++.|++... ..+
T Consensus 43 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 122 (373)
T cd06453 43 DAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD 122 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC
Confidence 34678889999999976 66777888889875 445655 89999999987766321 111
Q ss_pred ------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-cccCCCeEEEeccccc
Q 019543 112 ------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKF 154 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-~~~~~~Di~~~S~sK~ 154 (339)
++|.++|++||++|++|++|+.|.... ....++|++++|++|+
T Consensus 123 ~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~ 202 (373)
T cd06453 123 DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKM 202 (373)
T ss_pred CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccc
Confidence 899999999999999999998776532 2245789999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHh--------------------cCCCCChHHHHH----HHhchh--hHHHHHH
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNA--------------------EGSGLAPFDCWI----CLRGVK--TMALRVE 208 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--------------------~~~~~~~~~a~~----~~~~l~--~~~~r~~ 208 (339)
+++++ +|++++++ ++++.++..... +....++..+.+ ++..++ .++.+.+
T Consensus 203 ~~~~g---~g~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~ 278 (373)
T cd06453 203 LGPTG---IGVLYGKE-ELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAA 278 (373)
T ss_pred cCCCC---cEEEEEch-HHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 99632 57887765 566655432210 111122222222 122222 2344566
Q ss_pred HHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccce
Q 019543 209 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLI 288 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~ 288 (339)
+..++++++.+.|+++++++.+. +. ...+++++|.+++. ...++.+.|+..|+.++.|..
T Consensus 279 ~~~~~~~~l~~~l~~~~~~~~~~-~~--------------~~~~~~~~~~~~~~-~~~~i~~~l~~~gi~i~~g~~---- 338 (373)
T cd06453 279 HEHELTAYALERLSEIPGVRVYG-DA--------------EDRAGVVSFNLEGI-HPHDVATILDQYGIAVRAGHH---- 338 (373)
T ss_pred HHHHHHHHHHHHHhcCCCeEEeC-Cc--------------cccCCeEEEEECCc-CHHHHHHHHHHCCEEeccCcc----
Confidence 66778889999999888776442 11 11457888887543 345677777777887765532
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
|.. ..-..+| .++.||+|++..++++.++.|.++|
T Consensus 339 --~~~--------~~~~~~~-~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 339 --CAQ--------PLMRRLG-VPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred --chh--------HHHHHhC-CCCeEEEEecCCCCHHHHHHHHhhC
Confidence 111 0111233 2468999999999998888887764
No 90
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.80 E-value=1.2e-17 Score=161.10 Aligned_cols=246 Identities=17% Similarity=0.134 Sum_probs=158.7
Q ss_pred chHHHHHHHHHhHhCC-C--eEEEcCcHHHHHHHHHH-----hcCCCCEEEEcCCCccchHH----HHH-----------
Q 019543 55 PTRDALESLLAKLDKA-D--RALCFTSGMAALAAVTH-----LLGTGEEIVAGDDLYGGTDR----LLS----------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~-~--~~l~~~sG~~A~~~il~-----ll~~GD~Vi~~~~~y~~~~~----~~~----------- 111 (339)
...+++++.+|+++|+ + ++++++++++++..++. .+++||+|+++++.|++... +.+
T Consensus 67 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 146 (406)
T PRK09295 67 EKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPL 146 (406)
T ss_pred HHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEec
Confidence 4577899999999986 2 45555556888875442 46899999999876654321 111
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEecccc
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATK 153 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK 153 (339)
++|.++|+++|+++++|++|+.|... +....++|++++|++|
T Consensus 147 ~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K 226 (406)
T PRK09295 147 NPDGTLQLETLPALFDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHK 226 (406)
T ss_pred CCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhh
Confidence 89999999999999999999887643 2234688999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHH----------------------HHhcCCCCChHHHHHHHhchhhH-----HHH
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFL----------------------QNAEGSGLAPFDCWICLRGVKTM-----ALR 206 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~----------------------~~~~~~~~~~~~a~~~~~~l~~~-----~~r 206 (339)
.+|++| .|+++.++ ++.+.+... .++...+.+....+.+..+++.+ +..
T Consensus 227 ~~gp~G---~G~l~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i 302 (406)
T PRK09295 227 LYGPTG---IGILYVKE-ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNI 302 (406)
T ss_pred ccCCCC---cEEEEEch-HhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHH
Confidence 766433 36887775 454443211 01111122222222222233322 333
Q ss_pred HHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCccc
Q 019543 207 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKS 286 (339)
Q Consensus 207 ~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s 286 (339)
.++.++.++++.+.|+++++++.+ .|. ..+++++|.+.+. ....+.+.|...||.++.|..
T Consensus 303 ~~~~~~l~~~l~~~l~~~~~~~~~-~~~---------------~~~~iv~~~~~~~-~~~~~~~~L~~~gI~v~~g~~-- 363 (406)
T PRK09295 303 AEYEQNLMHYALSQLESVPDLTLY-GPQ---------------NRLGVIAFNLGKH-HAYDVGSFLDNYGIAVRTGHH-- 363 (406)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEe-CCC---------------CCceEEEEEECCc-CHHHHHHHHHhCCeEEecccc--
Confidence 444556778888888888877533 231 1357999987543 234556667778998887642
Q ss_pred ceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 287 LISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 287 ~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
|.. .....+|. ++.||+|++..++++.|+.|.++|++
T Consensus 364 ----c~~--------~~~~~~~~-~~~iRiS~~~ynt~~did~l~~~l~~ 400 (406)
T PRK09295 364 ----CAM--------PLMAYYNV-PAMCRASLAMYNTHEEVDRLVAGLQR 400 (406)
T ss_pred ----chH--------HHHHHHCC-CCEEEEEccCCCCHHHHHHHHHHHHH
Confidence 211 01122342 36899999999999999999999975
No 91
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.80 E-value=9e-18 Score=160.07 Aligned_cols=252 Identities=21% Similarity=0.220 Sum_probs=164.9
Q ss_pred chHHHHHHHHHhHhCCC---eEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHH----H---------------
Q 019543 55 PTRDALESLLAKLDKAD---RALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLL----S--------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~----~--------------- 111 (339)
+..+++++.+++++|.+ ++++++|+++++..+ .+++++||+|+++.+.|..+...+ +
T Consensus 44 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 123 (376)
T TIGR01977 44 REVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEG 123 (376)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCC
Confidence 66789999999999974 456667888998754 457899999999887766543211 0
Q ss_pred ---------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEecccccccc
Q 019543 112 ---------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 157 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g 157 (339)
++|.++|+++|+++++|++|+.|... +....++|++++|++|++++
T Consensus 124 ~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~ 203 (376)
T TIGR01977 124 LISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLG 203 (376)
T ss_pred CcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEecccccccC
Confidence 89999999999999999999988653 33346899999999999987
Q ss_pred CCCceEEEEEEcChhHHHHHHH----H------------HHhcCCCCChHHHHHHHhchhhH-----HHHHHHHHHHHHH
Q 019543 158 HSDVMAGVLAVKGERLAKELYF----L------------QNAEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQK 216 (339)
Q Consensus 158 ~~~~~gG~v~~~~~~l~~~l~~----~------------~~~~~~~~~~~~a~~~~~~l~~~-----~~r~~~~~~~a~~ 216 (339)
+.+ .|++++.++ .....+.. . .++...+.+....+....+++.+ +...++..+++++
T Consensus 204 p~g-~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~ 281 (376)
T TIGR01977 204 PQG-TGGLYIREG-IKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEK 281 (376)
T ss_pred CCC-ceEEEEcCC-cCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 753 345554443 21111110 0 00111122222222222233332 3345666788889
Q ss_pred HHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcc-eeecccCCcccceecccccc
Q 019543 217 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMS 295 (339)
Q Consensus 217 l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~-~i~v~~G~~~s~~~~p~~~~ 295 (339)
+.+.|++.++++.+ .|.. + ...+++++|.+.+. ...++.+.|... ++.++.|...+...++
T Consensus 282 ~~~~l~~~~~~~~~-~~~~---~---------~~~~~~v~~~~~~~-~~~~~~~~L~~~~gi~v~~g~~~~~~~~~---- 343 (376)
T TIGR01977 282 LLNGLREINKVKIY-GPAD---P---------ANRVGVVSFTVEGI-DSEEVADILDEKFDIATRTGLHCAPLAHK---- 343 (376)
T ss_pred HHHHHhcCCCeEEe-CCCC---c---------cccCCeEEEEECCC-CHHHHHHHHhccCCEEEEcccccchHHHH----
Confidence 99999888876533 2211 1 11467899988543 345677788765 8888877543322111
Q ss_pred CCCCCHHHHHhCC-CCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 296 HASIPVEVRQARG-LTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 296 h~~~~~~~~~~~g-~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.+| ..++.||+|++..++++.++.+.++|++
T Consensus 344 ----------~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 344 ----------TIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred ----------HhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 122 2457899999999999999999999875
No 92
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.80 E-value=1.7e-17 Score=155.62 Aligned_cols=242 Identities=19% Similarity=0.167 Sum_probs=160.3
Q ss_pred CCchHHHHHHHHHhHhC--------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH------------
Q 019543 53 GNPTRDALESLLAKLDK--------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------ 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g--------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------ 111 (339)
..+...++++.++++++ .++.+++++|++|+..++ .+.++||+|+++++.|......++
T Consensus 34 ~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~ 113 (350)
T cd00609 34 PDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLD 113 (350)
T ss_pred CCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecc
Confidence 44556667777777665 336778888899988655 477899999999988776543322
Q ss_pred -----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C-------cccC
Q 019543 112 -----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R-------PLEL 142 (339)
Q Consensus 112 -----------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~-------~~~~ 142 (339)
++|.++|+++|+++++|++|+.+... . ....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~ 193 (350)
T cd00609 114 EEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAY 193 (350)
T ss_pred cccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCcc
Confidence 56679999999999999999764431 1 1234
Q ss_pred CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch----hhHHHHHHHHHHHHHHHH
Q 019543 143 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIA 218 (339)
Q Consensus 143 ~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l----~~~~~r~~~~~~~a~~l~ 218 (339)
+.|++++|++|+++.++ ...|+++++++++.+.++......+...+......+...+ +.+....++..++++++.
T Consensus 194 ~~~~~~~s~~K~~~~~g-~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 272 (350)
T cd00609 194 ERVIVLRSFSKTFGLPG-LRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALL 272 (350)
T ss_pred CcEEEEeecccccCCcc-cceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 67899999999998333 4578888876468888877665544444544433333333 334555666778888999
Q ss_pred HHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCC
Q 019543 219 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHAS 298 (339)
Q Consensus 219 ~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~ 298 (339)
+.|+.++.... .. ...+.++++.+.+......+.+.|++.|+.++.+..+..
T Consensus 273 ~~L~~~~~~~~-~~----------------~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~----------- 324 (350)
T cd00609 273 EALKELGPLVV-VK----------------PSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGE----------- 324 (350)
T ss_pred HHHHhcCCccc-cC----------------CCccEEEEEecCCCChHHHHHHHHHhCCEEEeccccccc-----------
Confidence 99988765321 11 113556777765433344556667777887765432110
Q ss_pred CCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 299 IPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 299 ~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..+..+|++++.. ++.++.+.++|+
T Consensus 325 ----------~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 325 ----------GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred ----------CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 1346899999998 566677777765
No 93
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.80 E-value=1.7e-17 Score=158.55 Aligned_cols=234 Identities=20% Similarity=0.187 Sum_probs=149.6
Q ss_pred CcccCCCCchHHHHHHHHHhHhC----CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDK----ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------- 111 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g----~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------- 111 (339)
|..+.+..+.++++.+.+++.+| .+++++++++++|+..++ .+++|||+|+++++.|......++
T Consensus 57 Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~ 136 (382)
T PRK06108 57 YTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVP 136 (382)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEee
Confidence 33333334556666666666656 356778888899987654 478999999999988765432211
Q ss_pred --------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc--Cc----cc
Q 019543 112 --------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS--RP----LE 141 (339)
Q Consensus 112 --------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~--~~----~~ 141 (339)
++|+++|+++|+++|+|++|+...+. .. ..
T Consensus 137 ~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 216 (382)
T PRK06108 137 LDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLD 216 (382)
T ss_pred CCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhh
Confidence 88999999999999999998754332 11 11
Q ss_pred ----CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHH
Q 019543 142 ----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDN 213 (339)
Q Consensus 142 ----~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~ 213 (339)
....+++.||||.++.+| .+.|++++++ ++++.+.......+...++....++...|+ .++...++.+++
T Consensus 217 ~~~~~~~~i~~~S~SK~~g~~G-~RiG~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 294 (382)
T PRK06108 217 IAEPDDRIIFVNSFSKNWAMTG-WRLGWLVAPP-ALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRS 294 (382)
T ss_pred cCCCcCCEEEEeechhhccCcc-cceeeeeCCH-HHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 123588999999998665 4567887764 677777766543344455554433333332 234555666677
Q ss_pred HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcccceeccc
Q 019543 214 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPC 292 (339)
Q Consensus 214 a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~ 292 (339)
.+.+.+.|+.+++++.. .| ..+..+++.+.+.....+|++.| +..|+.+..|..+. +
T Consensus 295 ~~~l~~~L~~~~~~~~~-~p----------------~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~----~- 352 (382)
T PRK06108 295 RDHLVDALRALPGVEVA-KP----------------DGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFG----P- 352 (382)
T ss_pred HHHHHHHHHhCCCCccc-CC----------------CeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhC----C-
Confidence 78888888877665321 11 12335567775433445677776 56788877664321 1
Q ss_pred cccCCCCCHHHHHhCCCCCCeEEEEecc
Q 019543 293 FMSHASIPVEVRQARGLTEDLVRISVGI 320 (339)
Q Consensus 293 ~~~h~~~~~~~~~~~g~~~~~lRisvg~ 320 (339)
..++.+|||++.
T Consensus 353 ----------------~~~~~~Ris~~~ 364 (382)
T PRK06108 353 ----------------GGEGFLRWCFAR 364 (382)
T ss_pred ----------------CCCCEEEEEecC
Confidence 124789999998
No 94
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.79 E-value=1.6e-17 Score=162.27 Aligned_cols=236 Identities=17% Similarity=0.169 Sum_probs=158.5
Q ss_pred chHHHHHHHHHhHhC----CCeEEEcCcHHHHHHHHHH-hcCCCCEEEEcCCCccchHHHHH------------------
Q 019543 55 PTRDALESLLAKLDK----ADRALCFTSGMAALAAVTH-LLGTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g----~~~~l~~~sG~~A~~~il~-ll~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
++++.+.+++....| .++.+++++.++|+.+++. +++|||.|++++|+|.+...+++
T Consensus 136 ~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~ 215 (459)
T COG1167 136 ELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDGIDP 215 (459)
T ss_pred HHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCH
Confidence 555566666654334 3457777777899987665 78999999999999999887665
Q ss_pred ----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-Ccc----c---CCCeEEEe
Q 019543 112 ----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPL----E---LGADIVMH 149 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~----~---~~~Di~~~ 149 (339)
++|.++|++||++||+||.++...+. .+. . .+--|+++
T Consensus 216 e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~g 295 (459)
T COG1167 216 EALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLG 295 (459)
T ss_pred HHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEe
Confidence 99999999999999999999754432 211 1 13349999
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHH----Hhc-hhh-HHHHHHHHHHHHHHHHHHHhC
Q 019543 150 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC----LRG-VKT-MALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 150 S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~----~~~-l~~-~~~r~~~~~~~a~~l~~~L~~ 223 (339)
||||++.. +.+.||+++++ .+++++...+.......+.+....+ ..+ .+. +...++.+.+..+.+.+.|+.
T Consensus 296 SFSK~l~P--glRlG~vv~p~-~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~ 372 (459)
T COG1167 296 SFSKTLAP--GLRLGYVVAPP-ELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAE 372 (459)
T ss_pred eehhhccc--ccceeeeeCCH-HHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999993 46788998875 7888888777666666666552222 121 222 233344455666777778877
Q ss_pred CC-CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeeccc-CCcccceeccccccCCCCCH
Q 019543 224 HP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSF-GSVKSLISMPCFMSHASIPV 301 (339)
Q Consensus 224 ~~-~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~-G~~~s~~~~p~~~~h~~~~~ 301 (339)
+. +...+..|. .|-.+|+.+.+..+..++.+++...|+.+.. |..+.. .+
T Consensus 373 ~~~~~~~~~~p~----------------gG~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~--~~---------- 424 (459)
T COG1167 373 YLPELATWTRPE----------------GGLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSA--DG---------- 424 (459)
T ss_pred hCCCCeeeecCC----------------ceEEEEEEcCCCCCHHHHHHHHHHCCCEEEcCCccccC--CC----------
Confidence 63 233333331 3668888887665567788777777777665 543221 00
Q ss_pred HHHHhCCCCCCeEEEEeccCCHHHHHH
Q 019543 302 EVRQARGLTEDLVRISVGIEDVNDLIS 328 (339)
Q Consensus 302 ~~~~~~g~~~~~lRisvg~e~~~~li~ 328 (339)
-..+.+|++++....+++.+
T Consensus 425 -------~~~~~~Rl~~s~~~~e~i~~ 444 (459)
T COG1167 425 -------DPRNGLRLSFSSPSEEEIEE 444 (459)
T ss_pred -------CCCCeEEEEcCCCCHHHHHH
Confidence 02468999999877665533
No 95
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.79 E-value=8.6e-18 Score=161.64 Aligned_cols=245 Identities=17% Similarity=0.119 Sum_probs=157.4
Q ss_pred chHHHHHHHHHhHhCCC---eEEEcCcHHHHHHHHHH-h----cCCCCEEEEcCCCccchHH----HHH-----------
Q 019543 55 PTRDALESLLAKLDKAD---RALCFTSGMAALAAVTH-L----LGTGEEIVAGDDLYGGTDR----LLS----------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~~sG~~A~~~il~-l----l~~GD~Vi~~~~~y~~~~~----~~~----------- 111 (339)
...+++++.+++++|++ ++++++|+++++..++. + +++||+|+++++.|++... ..+
T Consensus 60 ~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 139 (398)
T TIGR03392 60 ARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPI 139 (398)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEec
Confidence 34678999999999973 45566666889875443 4 5899999999988765321 111
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEecccc
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATK 153 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK 153 (339)
++|.++|++||+++++|++|+.+... +....++|++++|++|
T Consensus 140 ~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K 219 (398)
T TIGR03392 140 GADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHK 219 (398)
T ss_pred CCCCCcCHHHHHHHhccCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEeccc
Confidence 99999999999999999999877542 2234578999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHH---------------------HhcCCCCChHHHHHHHhchhh-----HHHHH
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQ---------------------NAEGSGLAPFDCWICLRGVKT-----MALRV 207 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~---------------------~~~~~~~~~~~a~~~~~~l~~-----~~~r~ 207 (339)
.++++| .|+++.++ ++.+.+.... ++...+.+......+..+++. +....
T Consensus 220 ~~gp~G---~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~ 295 (398)
T TIGR03392 220 LYGPTG---IGVLYGKT-ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAE 295 (398)
T ss_pred ccCCCc---eEEEEEcH-HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Confidence 776433 47887765 5555543211 111112222122222222222 22334
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccc
Q 019543 208 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSL 287 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~ 287 (339)
++..+.++++.+.|+++++++....| .+++++|.+.+.. ...+.+.|...||.++.|..
T Consensus 296 ~~~~~l~~~l~~~l~~l~g~~~~~~~-----------------~~~i~~~~~~~~~-~~~l~~~L~~~gI~v~~g~~--- 354 (398)
T TIGR03392 296 AWSVSLADLAEERLAQLPGFRSFRCP-----------------GSSLLAFDFAGVH-HSDLAALLAESGIALRAGQH--- 354 (398)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEeCCC-----------------CCcEEEEEeCCcC-HHHHHHHHHhCCEEEecCcc---
Confidence 45556788888889888876532111 3468888875432 34677778778998887642
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
|.. .....+|. ++.||+|++..++++.++.+.++|++
T Consensus 355 ---~~~--------~~~~~~g~-~~~iRvS~~~~~t~~ei~~l~~~l~~ 391 (398)
T TIGR03392 355 ---CAQ--------PLMAALGV-SGTLRASFAPYNTQQDVDALVDAVGA 391 (398)
T ss_pred ---chH--------HHHHHhCC-CCEEEEEeeccCCHHHHHHHHHHHHH
Confidence 211 11112332 36899999998888888888888764
No 96
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.79 E-value=1.5e-17 Score=160.02 Aligned_cols=208 Identities=25% Similarity=0.256 Sum_probs=134.3
Q ss_pred CCchHHHHHH----HHHhHhCCCeE-EEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHH------------------
Q 019543 53 GNPTRDALES----LLAKLDKADRA-LCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDR------------------ 108 (339)
Q Consensus 53 ~~~~~~~le~----~la~~~g~~~~-l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~------------------ 108 (339)
+.+..+.+|+ .+++++|.+.+ ++++||++|+.++ ..+++|||+|+++++.|++...
T Consensus 59 ~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 138 (402)
T cd00378 59 GCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVP 138 (402)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEec
Confidence 3444555554 56789998765 4556899998854 4588999999998876643210
Q ss_pred -----------------HHH--------------------HHHHHHHHHcCCEEEEeCCcCCCCC-----cCcccCCCeE
Q 019543 109 -----------------LLS--------------------RKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADI 146 (339)
Q Consensus 109 -----------------~~~--------------------~~I~~la~~~g~~livD~a~a~g~~-----~~~~~~~~Di 146 (339)
.+. ++|.++|++||+++++|++|..|.. ..++. ++|+
T Consensus 139 ~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~dv 217 (402)
T cd00378 139 YGVDPETGLIDYDALEKMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GADV 217 (402)
T ss_pred CCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCcE
Confidence 010 9999999999999999999866542 12233 6799
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh--cCCCCChHHHHH--HHh-chh-hHHHHHHHHHHHHHHHHHH
Q 019543 147 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSGLAPFDCWI--CLR-GVK-TMALRVEKQQDNAQKIAEF 220 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--~~~~~~~~~a~~--~~~-~l~-~~~~r~~~~~~~a~~l~~~ 220 (339)
+++|+||+++|+ .||+++++++++.++++..... .+....+..+.+ ++. .++ ..+.+++++.++++++.+.
T Consensus 218 ~~~s~sK~l~G~---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 294 (402)
T cd00378 218 VTTTTHKTLRGP---RGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEA 294 (402)
T ss_pred EEeccccCCCCC---CceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999643 4788888765677777654421 122111222111 111 222 3456777888999999999
Q ss_pred HhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCCcceeeccc
Q 019543 221 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSF 281 (339)
Q Consensus 221 L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~~~~i~v~~ 281 (339)
|+++ ++..+..| ..+.++++.+.+. ....++.+.|+..|+.++.
T Consensus 295 L~~~-g~~~~~~~----------------~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~ 339 (402)
T cd00378 295 LKER-GFKVVSGG----------------TDNHLVLVDLRPKGITGKAAEDALEEAGITVNK 339 (402)
T ss_pred HHhC-CCeEeecC----------------CCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcC
Confidence 9886 55432222 1367888887531 1233555566777887764
No 97
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.79 E-value=2.9e-17 Score=158.08 Aligned_cols=237 Identities=12% Similarity=0.106 Sum_probs=150.1
Q ss_pred HHHHHHHHHhHh----C----C-CeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 57 RDALESLLAKLD----K----A-DRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~----g----~-~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
..+|++.+++++ | . +++++++++++|+..+ ..+++|||+|++++|.|+.....+.
T Consensus 71 ~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~ 150 (399)
T PRK07681 71 IQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKEN 150 (399)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCC
Confidence 345556666554 3 2 3466666668898754 4578999999999998876653322
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----c-cc----CCC
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----P-LE----LGA 144 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~-~~----~~~ 144 (339)
++|+++|++||++||+|++|+...+.. . .. ...
T Consensus 151 ~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
T PRK07681 151 DFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEV 230 (399)
T ss_pred CCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCccc
Confidence 789999999999999999997433211 1 11 123
Q ss_pred eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEF 220 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~ 220 (339)
.|+++||||.++.+| .+.||++++ +++++.+.......+...+......+...++ .+....++.+++.+.+.+.
T Consensus 231 ~i~~~S~SK~~~~~G-lRiG~~i~~-~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 308 (399)
T PRK07681 231 GVEINSLSKSYSLAG-SRIGYMIGN-EEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDG 308 (399)
T ss_pred EEEEeecccccCCcc-ceeEEEecC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 588999999998766 456788776 4788888776655555555544444433332 2344455566777888888
Q ss_pred HhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCc-ceeecccCCcccceeccccccCCCC
Q 019543 221 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASI 299 (339)
Q Consensus 221 L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~-~~i~v~~G~~~s~~~~p~~~~h~~~ 299 (339)
|+.+ +++ +..| ..|..+++.+.+.....+|++.|.. .|+.+..|..+. +
T Consensus 309 L~~~-g~~-~~~p----------------~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~----~-------- 358 (399)
T PRK07681 309 FRTF-GWN-VDKP----------------AGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFG----P-------- 358 (399)
T ss_pred HHHC-CCc-ccCC----------------CeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhC----c--------
Confidence 8876 442 2222 1356777777543344567777644 788877664321 0
Q ss_pred CHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 300 PVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 300 ~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
-.++.+|||++.. ++.++...+.|++
T Consensus 359 ---------~~~~~iRis~~~~--~~~~~~~l~~l~~ 384 (399)
T PRK07681 359 ---------HGEGFVRIALVQD--EEVLQQAVENIRN 384 (399)
T ss_pred ---------CCCCeEEEEecCC--HHHHHHHHHHHHH
Confidence 0246899999842 3434444444443
No 98
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.78 E-value=2.2e-17 Score=159.06 Aligned_cols=249 Identities=20% Similarity=0.171 Sum_probs=158.5
Q ss_pred chHHHHHHHHHhHhCCC---eEEEcCcHHHHHHHHHH-----hcCCCCEEEEcCCCccchHH----HHH-----------
Q 019543 55 PTRDALESLLAKLDKAD---RALCFTSGMAALAAVTH-----LLGTGEEIVAGDDLYGGTDR----LLS----------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~~sG~~A~~~il~-----ll~~GD~Vi~~~~~y~~~~~----~~~----------- 111 (339)
...+++++.+++++|++ ++++++++++++..++. .+++||+|+++++.|++... +..
T Consensus 62 ~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~ 141 (403)
T TIGR01979 62 EAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPL 141 (403)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEec
Confidence 35678889999999975 46666666888765432 36899999999886655321 110
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEecccc
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATK 153 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK 153 (339)
++|.++|++||+++++|++|+.|.. .+....++|++++|++|
T Consensus 142 ~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K 221 (403)
T TIGR01979 142 DDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHK 221 (403)
T ss_pred CCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEeccc
Confidence 9999999999999999999988754 23334678999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHH---------------------HhcCCCCChHHHHHHHhchhh-----HHHHH
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQ---------------------NAEGSGLAPFDCWICLRGVKT-----MALRV 207 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~---------------------~~~~~~~~~~~a~~~~~~l~~-----~~~r~ 207 (339)
++|+.| .|+++.++ ++.+.+.... ++...+.+....+.+..+++. .+...
T Consensus 222 ~~gp~G---~g~l~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~ 297 (403)
T TIGR01979 222 MYGPTG---IGVLYGKE-ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIE 297 (403)
T ss_pred ccCCCC---ceEEEEch-HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHH
Confidence 886433 47887765 4555443110 011112222222222222322 23345
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccc
Q 019543 208 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSL 287 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~ 287 (339)
++..+.++++.+.|+++++++. ..|.- + ...++++.|.+.+. ...++.+.|+..||.++.|...+
T Consensus 298 ~~~~~l~~~l~~~l~~~~g~~~-~~~~~---~---------~~~~~~v~~~~~~~-~~~~~~~~L~~~gI~v~~g~~~~- 362 (403)
T TIGR01979 298 AHEHELTAYALERLGEIPGLRI-YGPRD---A---------EDRGGIISFNVEGV-HPHDVGTILDEEGIAVRSGHHCA- 362 (403)
T ss_pred HHHHHHHHHHHHHHhcCCCEEE-eCCCC---c---------cccCceEEEEeCCc-CHHHHHHHHhhCCEEEcchhhhh-
Confidence 5666778888888888887753 33321 0 11467888887543 23466777888899888664211
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.| ....+| .++.+|||++..++++.++.+.++|++
T Consensus 363 --~~-----------~~~~~~-~~~~iRiS~~~~~t~~di~~l~~~l~~ 397 (403)
T TIGR01979 363 --QP-----------LMRRFG-VPATCRASFYIYNTEEDIDALVEALKK 397 (403)
T ss_pred --HH-----------HHHHhC-CCCEEEEEeccCCCHHHHHHHHHHHHH
Confidence 11 111233 246899999988777777777777754
No 99
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.78 E-value=4.7e-17 Score=148.41 Aligned_cols=240 Identities=20% Similarity=0.235 Sum_probs=169.4
Q ss_pred CcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCC--c--c-chHHHHH---------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDL--Y--G-GTDRLLS--------- 111 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~--y--~-~~~~~~~--------- 111 (339)
..|+ .+|.++++|+++++++|.+.+++++|||+||.+ +.+.++||+.||+.... | . |-..++.
T Consensus 29 ~~YG--~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~ 106 (342)
T COG2008 29 DVYG--EDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQPGESVICHETAHIYTDECGAPEFFGGGQKLPIVP 106 (342)
T ss_pred CCCC--CCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCCCCeEEEeccccceecccCcHHHHcCCceeccCC
Confidence 4566 789999999999999999999999999999985 55688999999997541 1 0 1111110
Q ss_pred ----------------------------------------------HHHHHHHHHcCCEEEEeCCc------CCCCCcCc
Q 019543 112 ----------------------------------------------RKIAEMAHAHGALLLVDNSI------MSPVLSRP 139 (339)
Q Consensus 112 ----------------------------------------------~~I~~la~~~g~~livD~a~------a~g~~~~~ 139 (339)
++|.++||+||++|.+|.|- +.+....-
T Consensus 107 g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~ 186 (342)
T COG2008 107 GADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKT 186 (342)
T ss_pred CCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHH
Confidence 89999999999999999975 12211112
Q ss_pred ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCCh--HHHHHHHhchhhHHHHHHHHHHH--HH
Q 019543 140 LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP--FDCWICLRGVKTMALRVEKQQDN--AQ 215 (339)
Q Consensus 140 ~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~--~~a~~~~~~l~~~~~r~~~~~~~--a~ 215 (339)
...++|++.+++||.++.+ +|.|+..+.+++.+++.+++..|..++. +.++..+..|++...++...++| ++
T Consensus 187 ~~~~~D~v~~~~tK~g~~~----~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~ 262 (342)
T COG2008 187 IKSYVDSVSFCLTKGGGAP----VGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAA 262 (342)
T ss_pred HHhhCCEEEEecccCCcce----eeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3458899999999999843 5666666678999999998888877665 44555566677777788888888 99
Q ss_pred HHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHH-HHHHHHccCCcceeecccCCcccceeccccc
Q 019543 216 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA-LSKHVVETTKYFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 216 ~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~-~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~ 294 (339)
+|++.|+..++++ +..|. .+.++-+.++... ...++...+...++..+-+
T Consensus 263 ~La~~~~~~~G~~-~~~~~----------------~tN~vf~~l~~~~i~~l~~~~~~~~~~~~~~~~------------ 313 (342)
T COG2008 263 RLAEGLEAKPGVK-LAFPV----------------ETNMVFVRLPESAIEALRLAGALFYRGVLIGAH------------ 313 (342)
T ss_pred HHHHhhhhcCCce-eccCC----------------cccEEEEECChHHHHHHHhhchhheeeeeccCC------------
Confidence 9999999888875 33331 4567777776432 2223333333322221100
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
. ..+|+-...+..++.++.+..+++++
T Consensus 314 ---------------~-~~vRfvts~a~~~edv~~~~~~~~~~ 340 (342)
T COG2008 314 ---------------G-EIVRFVTSWATSEEDVDELVAAIKAL 340 (342)
T ss_pred ---------------C-ceEEEEeeccCCHHHHHHHHHHHHHh
Confidence 0 35888888777777777887777653
No 100
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.78 E-value=2.7e-17 Score=159.53 Aligned_cols=251 Identities=18% Similarity=0.163 Sum_probs=158.5
Q ss_pred chHHHHHHHHHhHhCCC---eEEEcCcHHHHHHHHHH-----hcCCCCEEEEcCCCccchHHHH----H-----------
Q 019543 55 PTRDALESLLAKLDKAD---RALCFTSGMAALAAVTH-----LLGTGEEIVAGDDLYGGTDRLL----S----------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~~sG~~A~~~il~-----ll~~GD~Vi~~~~~y~~~~~~~----~----------- 111 (339)
...+++++.+++++|++ ++++++++++++..++. .+++||+|+++++.|++....+ +
T Consensus 76 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~ 155 (424)
T PLN02855 76 DAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGL 155 (424)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEec
Confidence 34578899999999973 45566666888875543 3689999999988666532111 1
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEecccc
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATK 153 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK 153 (339)
++|+++|+++|+++++|++|+.|... +....++|++++|++|
T Consensus 156 ~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 235 (424)
T PLN02855 156 TPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHK 235 (424)
T ss_pred CCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeeccc
Confidence 89999999999999999999877542 3334678999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHH--------------------HhcCCCCChHHHHH-HHhchhh-----HHHHH
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQ--------------------NAEGSGLAPFDCWI-CLRGVKT-----MALRV 207 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~--------------------~~~~~~~~~~~a~~-~~~~l~~-----~~~r~ 207 (339)
.+| +.+ .|+++.++ ++.+.+.... .-+..+.++..... +..+++. ++...
T Consensus 236 ~~g-p~G--~G~l~~~~-~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~ 311 (424)
T PLN02855 236 MCG-PTG--IGFLWGKS-DLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIH 311 (424)
T ss_pred ccC-CCc--cEEEEEch-hhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 655 432 47887775 4555443210 00111112222222 2222332 23334
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcc-eeecccCCccc
Q 019543 208 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKS 286 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~-~i~v~~G~~~s 286 (339)
++..+.++++.+.|+++++++.+ .|. ++++ ...+++++|.+.+. ...++.+.|... +|.++.|..
T Consensus 312 ~~~~~l~~~l~~~L~~~~g~~i~-~~~-~~~~---------~~r~~~v~~~~~~~-~~~~v~~~L~~~~gI~v~~g~~-- 377 (424)
T PLN02855 312 EYEVELGTYLYEKLSSVPGVRIY-GPK-PSEG---------VGRAALCAFNVEGI-HPTDLSTFLDQQHGVAIRSGHH-- 377 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEe-CCC-cccc---------cCcccEEEEEECCc-CHHHHHHHhcccCCEEEechhh--
Confidence 44556677888888888887533 231 1111 11467999987543 234677777665 888886642
Q ss_pred ceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 287 LISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 287 ~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
|....| ...|+ ++.||+|++..++++.++.|.++|++
T Consensus 378 ----c~~~~~--------~~~g~-~~~iRiS~~~ynt~~di~~l~~~l~~ 414 (424)
T PLN02855 378 ----CAQPLH--------RYLGV-NASARASLYFYNTKEEVDAFIHALKD 414 (424)
T ss_pred ----hhHHHH--------HHhCC-CCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 211111 22343 36799999999888888888888864
No 101
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.78 E-value=4.9e-17 Score=155.01 Aligned_cols=229 Identities=17% Similarity=0.191 Sum_probs=145.0
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcCCCCEEEEcCCCccchH----------------------HH
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLGTGEEIVAGDDLYGGTD----------------------RL 109 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~~GD~Vi~~~~~y~~~~----------------------~~ 109 (339)
..+.++++|+++|+++|++++++|+||+.|+..+.. +.++||.|+++...+..+. ..
T Consensus 54 ~~~~~~~~e~~la~~~~~~~~l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~~d~~~l~~~ 133 (370)
T PRK05937 54 PSSLLDDLEHKIAHFHGAPEAFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRHNDLDHLESL 133 (370)
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecCCCHHHHHHH
Confidence 457899999999999999999999999999876554 4578898887554322211 11
Q ss_pred HH---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcc-----cCC---CeEEEeccccc
Q 019543 110 LS---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPL-----ELG---ADIVMHSATKF 154 (339)
Q Consensus 110 ~~---------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~-----~~~---~Di~~~S~sK~ 154 (339)
++ ++|.++|+++|+++++|++|+.|..+... .++ .++.+.|+||.
T Consensus 134 l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~ 213 (370)
T PRK05937 134 LESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKA 213 (370)
T ss_pred HHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhh
Confidence 10 99999999999999999999987653211 122 24678899999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHH--HhcCCCCChHHHHHHHhchhhHH----HHHHHHHHHHHHHHHHHhCCCCce
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQ--NAEGSGLAPFDCWICLRGVKTMA----LRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~--~~~~~~~~~~~a~~~~~~l~~~~----~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
+|+. |+.++..+ +..+.+.... ..++.++++...+.+..+++.+. ...++.+++.+++.+.|...
T Consensus 214 ~g~~----G~~vl~~~-~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~---- 284 (370)
T PRK05937 214 LGSM----GAALLSSS-EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSA---- 284 (370)
T ss_pred hhcC----ceEEEcCH-HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC----
Confidence 9854 33444543 4444444221 12345566665444444444432 22334444455555444321
Q ss_pred EEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCC
Q 019543 229 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 308 (339)
Q Consensus 229 ~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g 308 (339)
+.+.+.+|.+++.. ...+.+.|...|+.++. +..|
T Consensus 285 ---------------------~~~~~~~i~~~~~~-~~~~~~~L~~~gi~v~~------~~~~----------------- 319 (370)
T PRK05937 285 ---------------------APGCVQPIFLPGIS-EQELYSKLVETGIRVGV------VCFP----------------- 319 (370)
T ss_pred ---------------------CCCCEEEEEeCChh-HHHHHHHHHHCCeeEEe------eCCC-----------------
Confidence 01234566665443 35677777777776541 1122
Q ss_pred CCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 309 LTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 309 ~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+.||+|++..++++.++.+.++|++
T Consensus 320 -~~~~iRis~~~~~t~edid~l~~~L~~ 346 (370)
T PRK05937 320 -TGPFLRVNLHAFNTEDEVDILVSVLAT 346 (370)
T ss_pred -CCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 235799999998888888888888764
No 102
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.77 E-value=8.4e-18 Score=148.47 Aligned_cols=255 Identities=18% Similarity=0.250 Sum_probs=181.9
Q ss_pred cccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHH-HHHH-hcCCCCEEEEcC
Q 019543 31 YQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTH-LLGTGEEIVAGD 100 (339)
Q Consensus 31 ~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~-~il~-ll~~GD~Vi~~~ 100 (339)
.+|.|++.++++ ..+...|+ ..|+..+||++.|+++|.|.+++++||+..|. +++. +-++|.+||+.+
T Consensus 26 LRSDTvT~PTdeMr~am~eA~vgDdVyG--eD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd 103 (384)
T KOG1368|consen 26 LRSDTVTVPTDEMRRAMAEASVGDDVYG--EDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGD 103 (384)
T ss_pred cccccccCChHHHHHHHhhcccCccccc--CCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEEecc
Confidence 467788777764 23455677 78999999999999999999999999998886 5666 556999999987
Q ss_pred CC----cc-chHHHHH----------------------------------------------------------HHHHHH
Q 019543 101 DL----YG-GTDRLLS----------------------------------------------------------RKIAEM 117 (339)
Q Consensus 101 ~~----y~-~~~~~~~----------------------------------------------------------~~I~~l 117 (339)
.. |. |....+. ++|.++
T Consensus 104 ~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~l 183 (384)
T KOG1368|consen 104 RAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKAL 183 (384)
T ss_pred chheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHH
Confidence 52 21 1111110 889999
Q ss_pred HHHcCCEEEEeCCc------CCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCCh-
Q 019543 118 AHAHGALLLVDNSI------MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP- 190 (339)
Q Consensus 118 a~~~g~~livD~a~------a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~- 190 (339)
|++||+.|..|.|- +.|+..+.+...+|-+...+||.+|.| +|.+++++ .+++++.+.++..+|.++-.
T Consensus 184 ak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~-k~FI~kA~~~RKalGGGmRQs 259 (384)
T KOG1368|consen 184 AKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGS-KDFIDKARHFRKALGGGMRQS 259 (384)
T ss_pred HhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEcc-HHHHHHHHHHHHHhcCchhHH
Confidence 99999999999874 344433333335687888899999854 45566655 58999999999888766644
Q ss_pred -HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-CHHHHHHH
Q 019543 191 -FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHV 268 (339)
Q Consensus 191 -~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-~~~~~~~~ 268 (339)
..+++++-+|+.....+++-++.+..++++++..+.|+ +..|.. .+.|+-+++. ..-.+..+
T Consensus 260 GvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i~-v~v~a~---------------etNiv~~~l~q~~~~~~~l 323 (384)
T KOG1368|consen 260 GVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEIR-VEVPAV---------------ETNIVNMVLCQARLTAEEL 323 (384)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcccccee-eecchh---------------hcceeeeecccccCCHHHH
Confidence 56677777777766678888899999999999877664 444432 3567776652 33346778
Q ss_pred HccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 269 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 269 ~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
++.++..|+..-.| ...++|+.+..--+++.++.+..++
T Consensus 324 ~~~~~k~gi~lm~~---------------------------~s~r~Rivlh~Qvt~~~ve~~~~~~ 362 (384)
T KOG1368|consen 324 CKFLEKNGILLMGG---------------------------ASRRIRIVLHHQVTDEDVEYVKSVL 362 (384)
T ss_pred HHHHHHCCeEEeec---------------------------cccceEEEEEEecCHHHHHHHHHHH
Confidence 88887777754322 2245888887665666666666655
No 103
>PRK08960 hypothetical protein; Provisional
Probab=99.77 E-value=1.1e-16 Score=153.49 Aligned_cols=231 Identities=16% Similarity=0.077 Sum_probs=147.6
Q ss_pred hHHHHHHHHHhHhC--------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 56 TRDALESLLAKLDK--------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g--------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
...+|++.++++++ .+++++++++++|+..++ .+++|||+|+++++.|+.....+.
T Consensus 70 g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 149 (387)
T PRK08960 70 GLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDS 149 (387)
T ss_pred CCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCccc
Confidence 34567777777652 346777777799998654 478999999999999876543332
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-c---ccCC-CeEEE
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-P---LELG-ADIVM 148 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-~---~~~~-~Di~~ 148 (339)
++|+++|++||+++|+|++|..-.+.. . .... -.+++
T Consensus 150 ~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~ 229 (387)
T PRK08960 150 RYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVL 229 (387)
T ss_pred CCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEE
Confidence 788899999999999999986433211 1 1111 23788
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch-----hhHHHHHHHHHHHHHHHHHHHhC
Q 019543 149 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 149 ~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l-----~~~~~r~~~~~~~a~~l~~~L~~ 223 (339)
+||||.+|.+| .+.|++++++ ++++.+......++...+.+...++...+ +.+....++..++.+.+.+.|+.
T Consensus 230 ~S~SK~~g~~G-lRiG~~~~~~-~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 307 (387)
T PRK08960 230 NSFSKYFGMTG-WRLGWLVAPP-AAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRE 307 (387)
T ss_pred eecccccCCcc-cEEEEEEcCH-HHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998776 4567888764 67787777665555555555433333333 22344455666777888888887
Q ss_pred CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccC-CcceeecccCCcccceeccccccCCCCCH
Q 019543 224 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPV 301 (339)
Q Consensus 224 ~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~~~~ 301 (339)
++ +..+..|. .+..+++.+.+ .....+|++.| +..|+.+..|..+.. +
T Consensus 308 ~~-~~~~~~p~----------------g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~---------- 357 (387)
T PRK08960 308 LG-FGIAVEPQ----------------GAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGR---H---------- 357 (387)
T ss_pred cC-CcCCcCCC----------------eeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCC---C----------
Confidence 63 32212231 24456666643 12345677665 457888877643321 0
Q ss_pred HHHHhCCCCCCeEEEEeccCCHHHH
Q 019543 302 EVRQARGLTEDLVRISVGIEDVNDL 326 (339)
Q Consensus 302 ~~~~~~g~~~~~lRisvg~e~~~~l 326 (339)
..++.+|++++. +.+.+
T Consensus 358 -------~~~~~iRi~~~~-~~~~l 374 (387)
T PRK08960 358 -------QAGQHVRFAYTQ-SLPRL 374 (387)
T ss_pred -------CCCCeEEEEecC-CHHHH
Confidence 023679999996 34443
No 104
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.77 E-value=1.3e-16 Score=153.24 Aligned_cols=238 Identities=17% Similarity=0.142 Sum_probs=154.3
Q ss_pred hHHHHHHHHHhHh----C----CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 56 TRDALESLLAKLD----K----ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~----g----~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
....|++.+++++ | .++.++++++++|+..++ .++++||+|+++++.|.+....++
T Consensus 69 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 148 (393)
T PRK05764 69 GIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEEN 148 (393)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCccc
Confidence 4567788887775 3 245777777789998644 578999999999998876543222
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----c---c---cCC
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----P---L---ELG 143 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~---~---~~~ 143 (339)
++|+++|++||+++++|++|+...+.. . + ..+
T Consensus 149 ~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 228 (393)
T PRK05764 149 GFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRD 228 (393)
T ss_pred CCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcC
Confidence 789999999999999999997543211 1 1 123
Q ss_pred CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHH
Q 019543 144 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAE 219 (339)
Q Consensus 144 ~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~ 219 (339)
.+++++||||.++.+|. ..|+++++ +++++.++......+...++...+.+...++ .+....++..++.+.+.+
T Consensus 229 ~~i~~~s~SK~~~~~G~-RiG~i~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 306 (393)
T PRK05764 229 RTITVNGFSKAYAMTGW-RLGYAAGP-KELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVD 306 (393)
T ss_pred CEEEEecCcccccCccc-eeEEEecC-HHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH
Confidence 47999999999987764 45788766 5788888776655555666666555544443 234445556677888888
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHH-----HHHHHHccC-CcceeecccCCcccceecccc
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA-----LSKHVVETT-KYFSITVSFGSVKSLISMPCF 293 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~-----~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~ 293 (339)
.|++++++.. ..| ..+..+++.+.+.. ...++.+.+ +..|+.+..|..+.
T Consensus 307 ~L~~~~g~~~-~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~------- 362 (393)
T PRK05764 307 GLNEIPGLEC-PKP----------------EGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFG------- 362 (393)
T ss_pred HHhhCCCCcc-cCC----------------CcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccC-------
Confidence 9988766532 111 12345566654321 135666655 55788877654321
Q ss_pred ccCCCCCHHHHHhCCCCCCeEEEEecc--CCHHHHHHHHHHHHh
Q 019543 294 MSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 335 (339)
Q Consensus 294 ~~h~~~~~~~~~~~g~~~~~lRisvg~--e~~~~li~~l~~al~ 335 (339)
.++.+|||++. ++.++.++.|.++++
T Consensus 363 ----------------~~~~vRis~~~~~~~~~~~i~~l~~~~~ 390 (393)
T PRK05764 363 ----------------APGYVRLSYATSLEDLEEGLERIERFLE 390 (393)
T ss_pred ----------------CCCEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 13679999985 333444555555544
No 105
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.76 E-value=3.4e-17 Score=157.32 Aligned_cols=247 Identities=19% Similarity=0.131 Sum_probs=154.8
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-H---hcCCCCEEEEcCCCccchHHHH----H-------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-H---LLGTGEEIVAGDDLYGGTDRLL----S------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~---ll~~GD~Vi~~~~~y~~~~~~~----~------------- 111 (339)
+..+++++.+++++|++ .+++.++++.++..++ . .++|||+|+++++.|.+....+ +
T Consensus 60 ~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~ 139 (397)
T TIGR01976 60 QVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDE 139 (397)
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccc
Confidence 56789999999999975 3555566677765332 2 4689999999988665432111 1
Q ss_pred ------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccc
Q 019543 112 ------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 154 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~ 154 (339)
++|.++|++||+++++|++|+.|... +....++|++++|++|+
T Consensus 140 ~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~ 219 (397)
T TIGR01976 140 ATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKF 219 (397)
T ss_pred cCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhh
Confidence 99999999999999999999766432 33346889999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHh---------c-CCCCChHHHHHHHhchhhH-------------------HH
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNA---------E-GSGLAPFDCWICLRGVKTM-------------------AL 205 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~---------~-~~~~~~~~a~~~~~~l~~~-------------------~~ 205 (339)
+|. ..|++++++ ++++.+...... + ..+.+....+.+..+++.+ +.
T Consensus 220 ~g~----~~G~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~ 294 (397)
T TIGR01976 220 FGP----HMGILWGRP-ELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQA 294 (397)
T ss_pred cCC----ceEEEEEcH-HHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHH
Confidence 862 267888875 566555432110 1 1122222111121222221 22
Q ss_pred HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcc
Q 019543 206 RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVK 285 (339)
Q Consensus 206 r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~ 285 (339)
..++..+.++++.+.|+++++++.+. |. + + ...+++++|.+.+. ...++.++|...||.++.|...
T Consensus 295 ~~~~~~~l~~~l~~~L~~~~~~~~~~-~~-~--~---------~~~~~~~~~~~~~~-~~~~l~~~L~~~gI~v~~~~~~ 360 (397)
T TIGR01976 295 IDAYENRLAEYLLVGLSDLPGVTLYG-VA-R--L---------AARVPTVSFTVHGL-PPQRVVRRLADQGIDAWAGHFY 360 (397)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEeC-CC-C--c---------cCCCceEEEEeCCc-CHHHHHHHHHHCCeEEEeCccc
Confidence 23334456777888888877664322 21 0 0 12467888887543 3456788888889988855321
Q ss_pred cceeccccccCCCCCHHHHHhCCCC--CCeEEEEeccCCHHHHHHHHHHHH
Q 019543 286 SLISMPCFMSHASIPVEVRQARGLT--EDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 286 s~~~~p~~~~h~~~~~~~~~~~g~~--~~~lRisvg~e~~~~li~~l~~al 334 (339)
. . ......|++ .+.+|+|++..++++.++.+.++|
T Consensus 361 ~------~--------~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 361 A------V--------RLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred h------H--------HHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 1 0 001122332 467999999999999888888765
No 106
>PRK04311 selenocysteine synthase; Provisional
Probab=99.76 E-value=6.2e-18 Score=164.26 Aligned_cols=168 Identities=25% Similarity=0.368 Sum_probs=126.1
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCC-Cc--cchHHH---HH----------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDD-LY--GGTDRL---LS---------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~-~y--~~~~~~---~~---------------- 111 (339)
++..+.+|+.+++++|++++++|+||++|+.+++..+.+||+||+++. .| ++...+ +.
T Consensus 126 g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~ 205 (464)
T PRK04311 126 GSRDRALAALLCALTGAEDALVVNNNAAAVLLALNALAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTNRTH 205 (464)
T ss_pred chHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCCCCC
Confidence 355789999999999999999999999999877777799999999875 33 332211 11
Q ss_pred ----------------------------------HHHHHHHHHcCCEEEEeCCcCC------------CCCcCcccCCCe
Q 019543 112 ----------------------------------RKIAEMAHAHGALLLVDNSIMS------------PVLSRPLELGAD 145 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g~~livD~a~a~------------g~~~~~~~~~~D 145 (339)
++|+++||+||+++++|++++. +...+++..|+|
T Consensus 206 ~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaD 285 (464)
T PRK04311 206 LRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVD 285 (464)
T ss_pred HHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCc
Confidence 8999999999999999995421 111234557999
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHH--HHH---hcCCCCChHHH-----------HHHHhchhhHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF--LQN---AEGSGLAPFDC-----------WICLRGVKTMALRVEK 209 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~--~~~---~~~~~~~~~~a-----------~~~~~~l~~~~~r~~~ 209 (339)
++++|.+|+++|| .+|++++++ +++++++. +.+ .-+..++++.+ +..+..++++..|+++
T Consensus 286 iv~fSg~K~LgGp---~~G~i~g~~-~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~ 361 (464)
T PRK04311 286 LVTFSGDKLLGGP---QAGIIVGKK-ELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEE 361 (464)
T ss_pred EEEecCcccccCC---ceEEEEEcH-HHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHH
Confidence 9999999999987 478998875 67777663 111 12344444443 3344556678889999
Q ss_pred HHHHHHHHHHHHhCCC
Q 019543 210 QQDNAQKIAEFLASHP 225 (339)
Q Consensus 210 ~~~~a~~l~~~L~~~~ 225 (339)
+++++++++++|+.++
T Consensus 362 ~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 362 LRARAERLAAALKAAL 377 (464)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999999875
No 107
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.76 E-value=3.8e-17 Score=159.68 Aligned_cols=255 Identities=20% Similarity=0.164 Sum_probs=152.7
Q ss_pred CCcccCC--CCchHHHHHH----HHHhHhCCC-eEEEc----CcHHHHHHH-HHHhcCCCCEEEEcCC-----Cccch--
Q 019543 46 PYDYTRS--GNPTRDALES----LLAKLDKAD-RALCF----TSGMAALAA-VTHLLGTGEEIVAGDD-----LYGGT-- 106 (339)
Q Consensus 46 ~~~y~r~--~~~~~~~le~----~la~~~g~~-~~l~~----~sG~~A~~~-il~ll~~GD~Vi~~~~-----~y~~~-- 106 (339)
++..+|+ ++..++++|+ +..++++++ ..+++ +||+.||.+ +.++++|||+|++.+. ..++.
T Consensus 65 G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~ 144 (475)
T PLN03226 65 GLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQT 144 (475)
T ss_pred CCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhh
Confidence 4555564 5578889987 445556655 45555 899999985 5569999999998542 00110
Q ss_pred -------------------------------HHHHH--------------------HHHHHHHHHcCCEEEEeCCcCCCC
Q 019543 107 -------------------------------DRLLS--------------------RKIAEMAHAHGALLLVDNSIMSPV 135 (339)
Q Consensus 107 -------------------------------~~~~~--------------------~~I~~la~~~g~~livD~a~a~g~ 135 (339)
...+. ++|.++|++||+++++|++|++|+
T Consensus 145 ~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gl 224 (475)
T PLN03226 145 DGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGL 224 (475)
T ss_pred cccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCc
Confidence 01111 899999999999999999999887
Q ss_pred CcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHH-----------HH--HHHHHH--hcCCCCChHHHHH
Q 019543 136 LSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-----------KE--LYFLQN--AEGSGLAPFDCWI 195 (339)
Q Consensus 136 ~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~-----------~~--l~~~~~--~~~~~~~~~~a~~ 195 (339)
... ++. ++|++++|++|+|.|+ .||+|++++ ... +. ..+... .+.+++++...+.
T Consensus 225 i~~~~~~~p~~-~~Div~~t~hK~L~GP---~Gg~I~~~~-~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaa 299 (475)
T PLN03226 225 VAAQEAASPFE-YCDVVTTTTHKSLRGP---RGGMIFFRK-GPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAA 299 (475)
T ss_pred ccCCCCCCCCC-CCeEEEecCcccccCC---CceEEEEch-hhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHH
Confidence 632 233 6899999999999765 378888875 332 22 111111 2344555554443
Q ss_pred HHhchhh-----HHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHH
Q 019543 196 CLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVV 269 (339)
Q Consensus 196 ~~~~l~~-----~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~ 269 (339)
+..+++. .+.+.++..+|++++++.|++ .++..+. ++ ...+++.|.+.. .....++.
T Consensus 300 l~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~-~G~~l~~-~~---------------t~~hi~lv~~~~~gi~~~~~~ 362 (475)
T PLN03226 300 LAVALKQAMTPEFKAYQKQVKANAAALANRLMS-KGYKLVT-GG---------------TDNHLVLWDLRPLGLTGSRVE 362 (475)
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHh-CCCEEEc-CC---------------CCCCEEEEEccCCCCCHHHHH
Confidence 3334443 345678888999999999987 4554332 21 123455554421 11122344
Q ss_pred ccCCcceeecccCC---cccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 270 ETTKYFSITVSFGS---VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 270 ~~L~~~~i~v~~G~---~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+.|...+|.++-+. ..+.+..|.. +.| +....|..++.++++.+.+.|.++|+
T Consensus 363 ~~L~~~~I~~nk~~~p~~~~~~~~~gi------------RiG-t~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 363 KVLDLAHITLNKNAVPGDSSALVPGGV------------RIG-TPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred HHHHHCCCEECCCCCCCCcccCCCCCc------------ccC-cHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 44555677766442 1111111110 111 11234445566778888888888876
No 108
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.76 E-value=9.7e-17 Score=151.91 Aligned_cols=241 Identities=20% Similarity=0.154 Sum_probs=156.7
Q ss_pred chHHHHHHHHHhHhCCC--e-EEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccch--HHHHH-----------------
Q 019543 55 PTRDALESLLAKLDKAD--R-ALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGT--DRLLS----------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~-~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~--~~~~~----------------- 111 (339)
...+++++.+++++|++ + +++++||++|+..++ +++++||+|+++++.+.+. ....+
T Consensus 32 ~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 111 (356)
T cd06451 32 ALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAV 111 (356)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCC
Confidence 45789999999999973 3 556777899987544 5889999999987755442 11111
Q ss_pred --------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEeccccccccC
Q 019543 112 --------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGH 158 (339)
Q Consensus 112 --------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK~l~g~ 158 (339)
++|.++|+++|+++++|++|+.|.. .+....++|++++|++|+++++
T Consensus 112 ~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p 191 (356)
T cd06451 112 SPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAP 191 (356)
T ss_pred CHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhccCC
Confidence 8999999999999999999987753 2333457899999999999976
Q ss_pred CCceEEEEEEcChhHHHHHHH----H---------HH------hcCCCCChHHHHHHHhchh-----hHHHHHHHHHHHH
Q 019543 159 SDVMAGVLAVKGERLAKELYF----L---------QN------AEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNA 214 (339)
Q Consensus 159 ~~~~gG~v~~~~~~l~~~l~~----~---------~~------~~~~~~~~~~a~~~~~~l~-----~~~~r~~~~~~~a 214 (339)
.+ .|+++.++ ++.+.+.. . .. ..+.+.++...+.+..+++ .++...++..+++
T Consensus 192 ~g--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~ 268 (356)
T cd06451 192 PG--LGPIAFSE-RALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLA 268 (356)
T ss_pred CC--cceeEECH-HHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 43 57888775 56666542 0 00 1112223322222222222 2344566667788
Q ss_pred HHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcc-eeecccCCcccceecccc
Q 019543 215 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCF 293 (339)
Q Consensus 215 ~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~-~i~v~~G~~~s~~~~p~~ 293 (339)
+++.+.|++. +++.+ .+ +. ...+.++++.+++.....++++.|... ||.++.|.. |.
T Consensus 269 ~~l~~~L~~~-g~~~~-~~--~~-----------~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~------~~- 326 (356)
T cd06451 269 KALREGLEAL-GLKLL-AK--PE-----------LRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLG------PT- 326 (356)
T ss_pred HHHHHHHHHc-CCeec-cC--cc-----------cCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccc------cc-
Confidence 8899988876 44322 11 10 002234455554333456788888776 887765431 10
Q ss_pred ccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 294 MSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 294 ~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.++.||+|++..++++.++.+.++|++
T Consensus 327 ----------------~~~~iRis~~~~~~~e~v~~~~~~l~~ 353 (356)
T cd06451 327 ----------------AGKVFRIGHMGEATREDVLGVLSALEE 353 (356)
T ss_pred ----------------cCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 235899999988888888888888865
No 109
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.76 E-value=2.2e-16 Score=151.18 Aligned_cols=233 Identities=15% Similarity=0.103 Sum_probs=145.3
Q ss_pred HHHHHHHHhHh----CC----C-eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 58 DALESLLAKLD----KA----D-RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 58 ~~le~~la~~~----g~----~-~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
.+|++.+++++ |. + .+++++++++++..++ .++++||+|++++|.|+.....++
T Consensus 70 ~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g 149 (383)
T TIGR03540 70 LAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENG 149 (383)
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccC
Confidence 34555555543 43 3 3445556688987654 478999999999998876543221
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----c---cc--CCCe
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----P---LE--LGAD 145 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~---~~--~~~D 145 (339)
++|+++|++||++||+|++|+...+.. . +. ....
T Consensus 150 ~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~ 229 (383)
T TIGR03540 150 FLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVG 229 (383)
T ss_pred CccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCE
Confidence 889999999999999999997433211 1 11 1235
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch----hhHHHHHHHHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l----~~~~~r~~~~~~~a~~l~~~L 221 (339)
|++.||||.+|.+| .+.||++++ +++.+.+...+...+...+......+...+ +.++..+++..++.+.+.+.|
T Consensus 230 i~~~SfSK~~g~~G-lRiG~~i~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L 307 (383)
T TIGR03540 230 IEFHSLSKTYNMTG-WRIGMAVGN-ADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEAL 307 (383)
T ss_pred EEEEecccccCCcc-ceeeEEeCC-HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999998666 455688776 468887776655444444443333333333 223444556677788888999
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcccceeccccccCCCCC
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIP 300 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~~~ 300 (339)
+++ ++. +..| ..+..+++.+.+.....+|++.| +..|+.+..|..+..
T Consensus 308 ~~~-~~~-~~~~----------------~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~------------- 356 (383)
T TIGR03540 308 KKI-GID-VEKP----------------KATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGE------------- 356 (383)
T ss_pred HhC-CCE-ecCC----------------CcceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCc-------------
Confidence 876 443 2212 12445777775433456777775 567888876643210
Q ss_pred HHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 301 VEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 301 ~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
-.++.+|||++.. .+ .+.++++.
T Consensus 357 --------~~~~~~Ris~~~~-~~----~l~~~l~~ 379 (383)
T TIGR03540 357 --------YGEGYIRISLTVP-DE----RLEEAVAR 379 (383)
T ss_pred --------cCCCeEEEEecCC-HH----HHHHHHHH
Confidence 0246899999853 33 45555543
No 110
>PLN00175 aminotransferase family protein; Provisional
Probab=99.76 E-value=2.1e-16 Score=152.76 Aligned_cols=207 Identities=14% Similarity=0.078 Sum_probs=133.3
Q ss_pred HHHHHHHHHhHh----CC----C-eEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 57 RDALESLLAKLD----KA----D-RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~----g~----~-~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
..+|++.+++++ |. + +.++++++++|+.. +..+++|||+|+++++.|......++
T Consensus 93 ~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 172 (413)
T PLN00175 93 VPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPD 172 (413)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCccc
Confidence 334555555544 42 3 35666667899875 44588999999999998876543322
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---cc-c----CCCeE
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---PL-E----LGADI 146 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~~-~----~~~Di 146 (339)
++|+++|++||++||+|++|....+.. ++ . ....|
T Consensus 173 ~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi 252 (413)
T PLN00175 173 FAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTV 252 (413)
T ss_pred CCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEE
Confidence 789999999999999999997544321 11 1 12358
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHHHh
Q 019543 147 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~L~ 222 (339)
+++||||.++.+|.+ .||+++++ ++++.+.........+.+.....++...|+ .++...+++.++.+.+.+.|+
T Consensus 253 ~i~SfSK~~~~~G~R-iG~~v~~~-~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 330 (413)
T PLN00175 253 TMNSLGKTFSLTGWK-IGWAIAPP-HLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLK 330 (413)
T ss_pred EEecchhhccCcchh-eeeeEeCH-HHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999877654 56777764 688888776655555556555444444443 245556667778888999998
Q ss_pred CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC--CHHHHHHHHccC-CcceeecccCC
Q 019543 223 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--SLALSKHVVETT-KYFSITVSFGS 283 (339)
Q Consensus 223 ~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~--~~~~~~~~~~~L-~~~~i~v~~G~ 283 (339)
.+ ++. +.-| ..+..+++.+. +.+...+|++.| +..|+.+..|.
T Consensus 331 ~~-g~~-~~~p----------------~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~ 376 (413)
T PLN00175 331 EV-GFK-VYPS----------------SGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPS 376 (413)
T ss_pred HC-CCe-ecCC----------------CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCch
Confidence 76 343 1111 12334666652 222345777776 45688776654
No 111
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.76 E-value=8.8e-17 Score=154.33 Aligned_cols=226 Identities=16% Similarity=0.131 Sum_probs=147.0
Q ss_pred chHHHHHHHHHhHh----C----CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 55 PTRDALESLLAKLD----K----ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~----g----~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
+...+|++.+++++ | .+++++++++++|+..++ .+++|||+|+++++.|.+....+.
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~ 149 (391)
T PRK08361 70 AGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREE 149 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCc
Confidence 34567777777765 3 246778888899987544 578999999999998876543322
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc---cCCCe
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL---ELGAD 145 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~---~~~~D 145 (339)
++|+++|+++|+++|+|++|+...+.. ++ ....+
T Consensus 150 ~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 229 (391)
T PRK08361 150 NEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNT 229 (391)
T ss_pred cCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCE
Confidence 789999999999999999997543211 11 12346
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh------hHHHHHHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK------TMALRVEKQQDNAQKIAE 219 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~------~~~~r~~~~~~~a~~l~~ 219 (339)
++++|+||.++.+| .+.|++++++ ++++.+...........+.+...++...|+ .+....++.+++.+.+.+
T Consensus 230 i~~~s~SK~~~~~G-lRiG~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (391)
T PRK08361 230 ILANSFSKTFAMTG-WRLGFVIAPE-QVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLK 307 (391)
T ss_pred EEEecCchhcCCcH-hhhhhhccCH-HHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHH
Confidence 89999999998665 4457888764 677777666554444555544443333332 234445556677788888
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccC-CcceeecccCCcccceeccccccCC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHA 297 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~ 297 (339)
.|+.+++++ +..|. .+..+++.+.+ .....+|++.| +..|+.+..|..+. .
T Consensus 308 ~L~~~~~~~-~~~p~----------------g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~----~------ 360 (391)
T PRK08361 308 RLKEMPHIK-VFEPK----------------GAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFG----K------ 360 (391)
T ss_pred HHHhCCCCe-ecCCC----------------EEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhC----C------
Confidence 998876653 22221 23456666642 22345677666 45688877664321 0
Q ss_pred CCCHHHHHhCCCCCCeEEEEecc
Q 019543 298 SIPVEVRQARGLTEDLVRISVGI 320 (339)
Q Consensus 298 ~~~~~~~~~~g~~~~~lRisvg~ 320 (339)
..++.+||+++.
T Consensus 361 -----------~~~~~iRi~~~~ 372 (391)
T PRK08361 361 -----------AGEGYIRISYAT 372 (391)
T ss_pred -----------CCCCEEEEEecC
Confidence 124679999996
No 112
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.76 E-value=9.4e-17 Score=152.58 Aligned_cols=244 Identities=18% Similarity=0.169 Sum_probs=154.3
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCC---------------EEEEcCCC---ccchH-HH---
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGE---------------EIVAGDDL---YGGTD-RL--- 109 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD---------------~Vi~~~~~---y~~~~-~~--- 109 (339)
..+.++++|+++++++|++++++++||++|+.+ +.+++++|| +|+++.+. |.+.. ..
T Consensus 43 ~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~ 122 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRL 122 (363)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHh
Confidence 347789999999999999999999999999985 556889998 89988743 32110 00
Q ss_pred ------------------HH--------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCe
Q 019543 110 ------------------LS--------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGAD 145 (339)
Q Consensus 110 ------------------~~--------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~D 145 (339)
++ ++|.++|++||+++++|++|+... ......++|
T Consensus 123 ~g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-~~~~~~g~D 201 (363)
T TIGR01437 123 GGGKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-QKYYRLGAD 201 (363)
T ss_pred cCCeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-HHHHHcCCC
Confidence 00 899999999999999999997322 122345789
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCC--ChHHHHHHHhchhh----HHHHHHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKT----MALRVEKQQDNAQKIAE 219 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~--~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~ 219 (339)
++++|++|+++|+ . +|+++.++ ++++.++......+..+ .......+..+++. -.++.+++.++++++.+
T Consensus 202 ~~~~S~~K~l~gp--~-~G~l~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~ 277 (363)
T TIGR01437 202 LVIYSGAKAIEGP--T-SGLVLGKK-KYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIE 277 (363)
T ss_pred EEEEeCCcccCCC--c-eEEEEEcH-HHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHH
Confidence 9999999999865 3 78888754 56665543221111111 01111111112222 23345555567778999
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-CHHHHHHHHccCCcce--eecccCCcccceeccccccC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFS--ITVSFGSVKSLISMPCFMSH 296 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-~~~~~~~~~~~L~~~~--i~v~~G~~~s~~~~p~~~~h 296 (339)
.|++.++++....+... .+ .-....++|... ......++.+.|++.+ |.++. +.
T Consensus 278 ~L~~i~g~~~~~~~~~~---~~-------~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~--------~~----- 334 (363)
T TIGR01437 278 ALNTLKGVSASIVQDEA---GR-------DIARAEIRFDESELGMTAADVVQALRQGEPAIYTRG--------YK----- 334 (363)
T ss_pred HHhcCCCeEEEEecCCC---CC-------cCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEee--------ee-----
Confidence 99999988655322110 00 001234556542 1123567788886645 33221 11
Q ss_pred CCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 297 ASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 297 ~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
...+.+|+++..-+ ++.++.+.++|+++
T Consensus 335 ------------~~~~~~~l~~~~~~-~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 335 ------------ANEGIIEIDPRSVT-GGQLDIIVERIREI 362 (363)
T ss_pred ------------ecCCeEEEEeecCC-HHHHHHHHHHHHHh
Confidence 25578999998766 66788999998753
No 113
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.76 E-value=7.4e-17 Score=151.44 Aligned_cols=234 Identities=18% Similarity=0.150 Sum_probs=158.2
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchH------------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTD------------------------ 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~------------------------ 107 (339)
..+..+++++.+++++|.++++++++|++|+..++ .+++|||+|+++++.|....
T Consensus 30 ~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d 109 (338)
T cd06502 30 EDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGENGKLT 109 (338)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCCcHHHHcCceEEeecCCCCcCC
Confidence 45789999999999999778999999999987654 47899999999887643210
Q ss_pred -----HHH---------H---------------------HHHHHHHHHcCCEEEEeCCcCCCC---Cc---CcccCCCeE
Q 019543 108 -----RLL---------S---------------------RKIAEMAHAHGALLLVDNSIMSPV---LS---RPLELGADI 146 (339)
Q Consensus 108 -----~~~---------~---------------------~~I~~la~~~g~~livD~a~a~g~---~~---~~~~~~~Di 146 (339)
..+ + ++|+++|++||+++++|++|..+. .+ .....++|+
T Consensus 110 ~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~ 189 (338)
T cd06502 110 PEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDS 189 (338)
T ss_pred HHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCE
Confidence 011 1 679999999999999999874221 11 112246799
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC--CCCChHHHHHHHhchhh--HHHHHHHHHHHHHHHHHHHh
Q 019543 147 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG--SGLAPFDCWICLRGVKT--MALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~--~~~~~~~a~~~~~~l~~--~~~r~~~~~~~a~~l~~~L~ 222 (339)
++.|+||++++++ |++++.+ +++.+.++.....++ ...++..++.+...|+. ...+.++..++++++.+.|+
T Consensus 190 ~~~s~sK~~~~~~---g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~ 265 (338)
T cd06502 190 VSFCLSKGGGAPV---GAVVVGN-RDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALE 265 (338)
T ss_pred EEEeccccCCCcc---ceEEECC-HHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998653 4445444 578888877654443 23455555555555554 45566777888899999998
Q ss_pred CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-CHHHHHHHHccCC---cceeecccCCcccceeccccccCCC
Q 019543 223 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTK---YFSITVSFGSVKSLISMPCFMSHAS 298 (339)
Q Consensus 223 ~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-~~~~~~~~~~~L~---~~~i~v~~G~~~s~~~~p~~~~h~~ 298 (339)
.++. . .+| +.++++.+.+. +.....++.+.+. ..|+.++ +.
T Consensus 266 ~~~~-~--~~~----------------~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~----------~~------ 310 (338)
T cd06502 266 ELGG-L--ESE----------------VQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFY----------AW------ 310 (338)
T ss_pred hcCC-C--ccc----------------ccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEE----------ec------
Confidence 8753 1 122 14567777663 3333445554432 2343321 11
Q ss_pred CCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 299 IPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 299 ~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+.|||++++.++++.++.+.+++++
T Consensus 311 -----------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 311 -----------GEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred -----------CCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 126799999999888888888888864
No 114
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.76 E-value=2.7e-16 Score=149.13 Aligned_cols=233 Identities=18% Similarity=0.190 Sum_probs=145.3
Q ss_pred chHHHHHHHHHhHhC-----CCeEEEcCcHHHHHHHHHH-h-cCCCCEEEEcCCCccchHHHHH----------------
Q 019543 55 PTRDALESLLAKLDK-----ADRALCFTSGMAALAAVTH-L-LGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g-----~~~~l~~~sG~~A~~~il~-l-l~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
++++++.+.+++.+| .+++++++++++++..++. + +++||+|+++++.|.+....++
T Consensus 60 ~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~l~ 139 (357)
T TIGR03539 60 ELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAADDPTELD 139 (357)
T ss_pred HHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccCChhhcC
Confidence 444555555554433 2456666667888876554 5 6999999999999976654322
Q ss_pred -------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcc---c-------CCCeEEEecccccc
Q 019543 112 -------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPL---E-------LGADIVMHSATKFI 155 (339)
Q Consensus 112 -------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~---~-------~~~Di~~~S~sK~l 155 (339)
++|+++|++||+++|+|++|+.-.+ ..+. . ..-.|+++||||.+
T Consensus 140 ~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 219 (357)
T TIGR03539 140 PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRS 219 (357)
T ss_pred ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEecccccc
Confidence 7899999999999999999963211 1111 0 11248999999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceEEec
Q 019543 156 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNY 232 (339)
Q Consensus 156 ~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~ 232 (339)
+.+| .++|+++++ +++++.++..+...+...+......+...|+. +....+...++.+.+.+.|+.+ ++. +..
T Consensus 220 ~~~G-~R~G~~i~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~-~~~ 295 (357)
T TIGR03539 220 NLAG-YRAGFVAGD-PALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFR-IDH 295 (357)
T ss_pred CCCc-eeEEEEecC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCC-CcC
Confidence 7766 567788865 47888887776555555555544444444432 3333444556677787888765 332 111
Q ss_pred CCCCCCCchHhHhhhcCCCcc-eEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCC
Q 019543 233 AGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 311 (339)
Q Consensus 233 p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~ 311 (339)
| .++ .+++.++. ....+.+.|.+.|+.+..|..+. + -.+
T Consensus 296 p-----------------~~~~~~~~~~~~--~~~~~~~~l~~~gV~v~pg~~f~----~-----------------~~~ 335 (357)
T TIGR03539 296 S-----------------EAGLYLWATRGE--DAWDTVDRLAELGILVAPGDFYG----P-----------------AGS 335 (357)
T ss_pred C-----------------CccEEEEEECCC--CHHHHHHHHHhCCEEECCccccC----C-----------------CCC
Confidence 1 234 45555543 23467777777788877654321 0 024
Q ss_pred CeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 312 DLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 312 ~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+.+|||++.+ ++ .+.++++.
T Consensus 336 ~~iRis~~~~--~~---~i~~~~~~ 355 (357)
T TIGR03539 336 QHVRVALTAT--DE---RIAAAVAR 355 (357)
T ss_pred CeEEEEecCC--HH---HHHHHHHh
Confidence 6899999973 23 45555554
No 115
>PRK07682 hypothetical protein; Validated
Probab=99.75 E-value=1.1e-16 Score=152.89 Aligned_cols=240 Identities=13% Similarity=0.123 Sum_probs=149.7
Q ss_pred chHHHHHHHHHhHh----C----CC-eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------
Q 019543 55 PTRDALESLLAKLD----K----AD-RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~----g----~~-~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
+...+|++.+++++ | .+ ++++++++++|+..++ .+++|||+|+++++.|+.....++
T Consensus 57 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 136 (378)
T PRK07682 57 AGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTL 136 (378)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCC
Confidence 34556666666655 3 23 4667777799998654 588999999999998875443221
Q ss_pred ----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c---cc--CC
Q 019543 112 ----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P---LE--LG 143 (339)
Q Consensus 112 ----------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~---~~--~~ 143 (339)
++|+++|++||+++|+|++|+...+.. + +. ..
T Consensus 137 ~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 216 (378)
T PRK07682 137 ENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRE 216 (378)
T ss_pred ccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccC
Confidence 889999999999999999997544321 1 11 12
Q ss_pred CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHHH
Q 019543 144 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAE 219 (339)
Q Consensus 144 ~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~ 219 (339)
..+++.||||.++.+| .+.|++++++ ++++.+...........+.....++...|+. +...+++..++.+.+.+
T Consensus 217 ~~i~~~S~SK~~~~~G-lR~G~~~~~~-~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 294 (378)
T PRK07682 217 RTILISGFSKGFAMTG-WRLGFIAAPV-YFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVT 294 (378)
T ss_pred CEEEEecCcccccChh-hhhhhhhcCH-HHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 3589999999998665 3457887764 6888887665544444555544444444432 34445556777888888
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccC-CcceeecccCCcccceeccccccCC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHA 297 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~ 297 (339)
.|+++ ++. +..| ..+..+++.+.. .....+|++.| +..|+.+..|..+. +
T Consensus 295 ~L~~~-~~~-~~~p----------------~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~----~------ 346 (378)
T PRK07682 295 SFNEI-GLT-CHVP----------------GGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFG----E------ 346 (378)
T ss_pred HHHHC-CCc-cCCC----------------CeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhC----c------
Confidence 88876 332 1112 123344444521 22345677765 46688887664321 1
Q ss_pred CCCHHHHHhCCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Q 019543 298 SIPVEVRQARGLTEDLVRISVGIE--DVNDLISDLDKALR 335 (339)
Q Consensus 298 ~~~~~~~~~~g~~~~~lRisvg~e--~~~~li~~l~~al~ 335 (339)
-.++.+|||++.+ +.++.++.|.++++
T Consensus 347 -----------~~~~~iRis~~~~~~~l~~~l~~l~~~l~ 375 (378)
T PRK07682 347 -----------SGEGFIRCSYATSLEQLQEAMKRMKRFVE 375 (378)
T ss_pred -----------CCCCeEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 0247899999973 12333444554444
No 116
>PRK07550 hypothetical protein; Provisional
Probab=99.75 E-value=2.7e-16 Score=150.69 Aligned_cols=238 Identities=18% Similarity=0.152 Sum_probs=146.7
Q ss_pred HHHHHHHHHhHhCC----CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 57 RDALESLLAKLDKA----DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~g~----~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
.+++.+.+.+..|. ++.++++++++|+..++ .+++|||+|+++++.|......++
T Consensus 73 r~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 152 (386)
T PRK07550 73 REAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPD 152 (386)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCC
Confidence 34444444444342 44555555588887655 478999999999998876543322
Q ss_pred ---------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc--Cc--c-c---C-CCeEEEe
Q 019543 112 ---------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS--RP--L-E---L-GADIVMH 149 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~g~~livD~a~a~g~~~--~~--~-~---~-~~Di~~~ 149 (339)
++|+++|++||++||+|++|+..... .+ . . . .-.+++.
T Consensus 153 ~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~ 232 (386)
T PRK07550 153 PAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLY 232 (386)
T ss_pred HHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEe
Confidence 88999999999999999998643221 11 1 1 1 1247889
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH----HHHHHHHHHHHHHHHHHHhCCC
Q 019543 150 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 150 S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~----~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
||||.++.+| .+.|++++++ ++++.++......+...+.....++...++.+ ....++..++.+.+.+.|+.++
T Consensus 233 S~SK~~g~~G-~RiG~i~~~~-~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 310 (386)
T PRK07550 233 SFSKSYALTG-HRVGAVVASP-ARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLP 310 (386)
T ss_pred cchhhccCcc-cceEeeecCH-HHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998666 4577888764 67777776665445555555444444443332 2233445667778888888765
Q ss_pred CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccC-CcceeecccCCcccceeccccccCCCCCHHH
Q 019543 226 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEV 303 (339)
Q Consensus 226 ~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~ 303 (339)
++. + .| ..+..+++.+.. ...+.++++.| +..|+.+..|..+. +
T Consensus 311 ~~~-~-~~----------------~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~----~------------ 356 (386)
T PRK07550 311 GWE-L-LA----------------SGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFG----P------------ 356 (386)
T ss_pred Cce-e-CC----------------CceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhC----C------------
Confidence 432 1 12 134566776643 23456777765 56788887665321 1
Q ss_pred HHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 304 RQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 304 ~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..++.+|||++..+ ++.++...+.|++
T Consensus 357 -----~~~~~iRis~~~~~-~~~~~~~~~~l~~ 383 (386)
T PRK07550 357 -----GQEGYLRLAFANAD-VAGIGELVERLRA 383 (386)
T ss_pred -----CCCCEEEEEeecCC-HHHHHHHHHHHHh
Confidence 02467999999755 3334444444443
No 117
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.75 E-value=2.6e-16 Score=149.62 Aligned_cols=233 Identities=18% Similarity=0.177 Sum_probs=145.6
Q ss_pred chHHHHHHHHHhHhC-----CCeEEEcCcHHHHHHHHHH-h-cCCCCEEEEcCCCccchHHHHH----------------
Q 019543 55 PTRDALESLLAKLDK-----ADRALCFTSGMAALAAVTH-L-LGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g-----~~~~l~~~sG~~A~~~il~-l-l~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
..++++.+.+.+..| .+++++++++++++..+.. + ++|||+|+++++.|........
T Consensus 66 ~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~l~ 145 (364)
T PRK07865 66 ELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADSLTELG 145 (364)
T ss_pred HHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCChhhCC
Confidence 344555555554434 2345555555788876544 5 6899999999999887643322
Q ss_pred -------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-Cc---cc-------CCCeEEEecccccc
Q 019543 112 -------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RP---LE-------LGADIVMHSATKFI 155 (339)
Q Consensus 112 -------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~---~~-------~~~Di~~~S~sK~l 155 (339)
++|+++|++||++||+||+|+...+. .+ +. ..-.|+++||||.+
T Consensus 146 ~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 225 (364)
T PRK07865 146 PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQS 225 (364)
T ss_pred cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhcc
Confidence 78999999999999999999743221 11 10 11249999999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceEEec
Q 019543 156 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNY 232 (339)
Q Consensus 156 ~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~ 232 (339)
+.+| .++||++++ +++++.++..+...+...+.....++...++. +...++...++.+.+.+.|+.+ ++. +..
T Consensus 226 ~~~G-lRiG~i~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~ 301 (364)
T PRK07865 226 NLAG-YRAGFVAGD-PALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFR-VDH 301 (364)
T ss_pred CCCc-eeeEEEecC-HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccC
Confidence 8666 567788876 47888887766655666666555544444432 3444555567777788888765 332 111
Q ss_pred CCCCCCCchHhHhhhcCCCcc-eEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCC
Q 019543 233 AGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 311 (339)
Q Consensus 233 p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~ 311 (339)
| .++ .+++.++. ....+.+.|...|+.+..|..+. + -.+
T Consensus 302 ~-----------------~~~~~~~~~~~~--~~~~~~~~l~~~gv~v~pg~~f~----~-----------------~~~ 341 (364)
T PRK07865 302 S-----------------EAGLYLWATRGE--DCWDTVAWLAERGILVAPGDFYG----P-----------------AGA 341 (364)
T ss_pred C-----------------CccEEEEEeCCC--CHHHHHHHHHHCCEEEeCccccC----c-----------------CCC
Confidence 1 234 45555532 23456666777788877654321 1 024
Q ss_pred CeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 312 DLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 312 ~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+.+||+++.. ++ ++.++++.
T Consensus 342 ~~iRi~~~~~--~~---~~~~~~~~ 361 (364)
T PRK07865 342 QHVRVALTAT--DE---RIAAAVER 361 (364)
T ss_pred CEEEEEecCC--HH---HHHHHHHH
Confidence 6899999863 33 45555543
No 118
>PRK12414 putative aminotransferase; Provisional
Probab=99.75 E-value=2.9e-16 Score=150.37 Aligned_cols=240 Identities=14% Similarity=0.083 Sum_probs=149.5
Q ss_pred CCchHHHHHHHHHhHhCC-----CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 53 GNPTRDALESLLAKLDKA-----DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~-----~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
..+.++++++.+++++|. ++++++++|++|+..++ .++.|||+|+++++.|......++
T Consensus 68 ~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 147 (384)
T PRK12414 68 IAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPED 147 (384)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccc
Confidence 346677888888888775 35888888899987544 588999999999998866543222
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----ccc-C----CCe
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PLE-L----GAD 145 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~~-~----~~D 145 (339)
++|+++|++||+++|+|++|....+.. ++. . +-.
T Consensus 148 ~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 227 (384)
T PRK12414 148 FRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERS 227 (384)
T ss_pred cccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcE
Confidence 889999999999999999997543211 111 1 124
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHh
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~ 222 (339)
|++.||||.++.+| .+.||+++++ ++++.+...........+.....++...|+. .....+...++.+.+.+.|+
T Consensus 228 i~~~SfSK~~~~pG-lRiG~~v~~~-~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~ 305 (384)
T PRK12414 228 VIVSSFGKSYHVTG-WRVGYCLAPA-ELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELA 305 (384)
T ss_pred EEEecccccccCcc-ceEEEEecCH-HHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999998766 4567887764 6778777766544444444443333333322 22334455677778888888
Q ss_pred CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--HHHHHHHH-ccCCcceeecccCCcccceeccccccCCCC
Q 019543 223 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVV-ETTKYFSITVSFGSVKSLISMPCFMSHASI 299 (339)
Q Consensus 223 ~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--~~~~~~~~-~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~ 299 (339)
.+ +++ + +|. ..+..+++.+.+ .....+++ +.++..|+.+..|..+.. .
T Consensus 306 ~~-g~~-~-~~~---------------~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~---~-------- 356 (384)
T PRK12414 306 GS-RFE-L-LPS---------------EGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYT---D-------- 356 (384)
T ss_pred hC-CCe-e-cCC---------------CcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcC---C--------
Confidence 76 332 2 221 123345545532 11123444 445667888876653311 0
Q ss_pred CHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 300 PVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 300 ~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+...+.+|||++.+ ++ .+.++++.
T Consensus 357 --------~~~~~~iRis~~~~--~~---~~~~~~~r 380 (384)
T PRK12414 357 --------GTDTGLIRLSFSKD--DA---TLVEGARR 380 (384)
T ss_pred --------CCCCCEEEEEecCC--HH---HHHHHHHH
Confidence 11246899999963 33 45555543
No 119
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.75 E-value=2.1e-16 Score=153.59 Aligned_cols=234 Identities=15% Similarity=0.115 Sum_probs=150.6
Q ss_pred HHHHHHHHhHhC----CC-eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 58 DALESLLAKLDK----AD-RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 58 ~~le~~la~~~g----~~-~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
.+|++.++++++ .+ ++++++++++|+..++ .+++|||+|++++|.|......++
T Consensus 124 ~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g~~~~~ 203 (431)
T PRK15481 124 PELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEK 203 (431)
T ss_pred HHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCCCCHHH
Confidence 457777777654 23 5666666789998655 588999999999999987654433
Q ss_pred -------------------------------HHHHHHHHHc-CCEEEEeCCcCCCCCc---Cccc--CCCeEEEeccccc
Q 019543 112 -------------------------------RKIAEMAHAH-GALLLVDNSIMSPVLS---RPLE--LGADIVMHSATKF 154 (339)
Q Consensus 112 -------------------------------~~I~~la~~~-g~~livD~a~a~g~~~---~~~~--~~~Di~~~S~sK~ 154 (339)
++|.++|++| +++||+||+|+..... ..+. ..--|+++||||.
T Consensus 204 l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~ 283 (431)
T PRK15481 204 LERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKA 283 (431)
T ss_pred HHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccc
Confidence 6999999999 9999999999643221 1121 1224899999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh------HHHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~------~~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
++ +|. +.||+++++ ++.+.+..........++.....++...|+. +....+...++.+.+.+.|+.+ ++.
T Consensus 284 ~~-~Gl-RiG~~i~~~-~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~ 359 (431)
T PRK15481 284 LG-PDL-RLAFVASDS-ATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIA 359 (431)
T ss_pred cC-CCc-eeEEEeCCH-HHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 99 664 566888764 6777776554433344566554444443432 3344556667777888888875 332
Q ss_pred EEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCC
Q 019543 229 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 308 (339)
Q Consensus 229 ~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g 308 (339)
+..| ..|..+++.+.. ...+|++.|...|+.+..|..+.. +
T Consensus 360 -~~~p----------------~gg~f~~~~l~~--~~~~~~~~l~~~gV~v~pg~~f~~---~----------------- 400 (431)
T PRK15481 360 -IPSP----------------GDGLNLWLPLDT--DSQATALTLAKSGWLVREGEAFGV---S----------------- 400 (431)
T ss_pred -cccC----------------CCeEEEEEECCC--CHHHHHHHHHHCCcEEecCCcccc---C-----------------
Confidence 1122 146677777753 235677777677888877654311 0
Q ss_pred CCCCeEEEEeccCC---HHHHHHHHHHHH
Q 019543 309 LTEDLVRISVGIED---VNDLISDLDKAL 334 (339)
Q Consensus 309 ~~~~~lRisvg~e~---~~~li~~l~~al 334 (339)
-..+.+|||++..+ .++.++.|.+++
T Consensus 401 ~~~~~iRis~~~~~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 401 APSHGLRITLSTLNDAEINRLAADLHQAL 429 (431)
T ss_pred CCCCeEEEEcCCCChHHHHHHHHHHHHHh
Confidence 02357999999744 334444554444
No 120
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.75 E-value=3.9e-16 Score=149.29 Aligned_cols=242 Identities=19% Similarity=0.166 Sum_probs=152.3
Q ss_pred hHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------------
Q 019543 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------------- 111 (339)
...+|++.+++++|.+ ++++++++++|+..++ .++++||+|+++++.|......+.
T Consensus 67 g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 146 (380)
T PRK06225 67 GFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLT 146 (380)
T ss_pred chHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCC
Confidence 3678999999998864 6778888899988655 478999999999987764322111
Q ss_pred ---------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc----ccCCCeEEEeccccc
Q 019543 112 ---------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP----LELGADIVMHSATKF 154 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~----~~~~~Di~~~S~sK~ 154 (339)
++|+++|++||+++|+|+++........ ......+++.||||+
T Consensus 147 ~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~ 226 (380)
T PRK06225 147 PELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKI 226 (380)
T ss_pred HHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhh
Confidence 8899999999999999999742111111 111346888999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch---hhHHHHH-HHHHHHHHHHHHHHhCCCCceEE
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRV-EKQQDNAQKIAEFLASHPRVKKV 230 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l---~~~~~r~-~~~~~~a~~l~~~L~~~~~i~~v 230 (339)
+|.+| ...|++++++ ++++.++.... ...+.+......+...+ ..+.++. +..+++.+.+.+.|+.++++...
T Consensus 227 ~g~~G-~RiG~i~~~~-~l~~~~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 303 (380)
T PRK06225 227 FGMAG-LRIGAVVATP-DLIEVVKSIVI-NDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLP 303 (380)
T ss_pred cCCcc-ceeEEEecCH-HHHHHHHHHHh-cccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccc
Confidence 97555 5567888764 67777765532 22333444333332222 2222222 33345566777888876654221
Q ss_pred ecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCC
Q 019543 231 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 309 (339)
Q Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~ 309 (339)
.+| +.+.++++.+.+ .....+|++.|.+.|+.+..|..+ .+. .
T Consensus 304 ~~~----------------~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~----~~~----------------~ 347 (380)
T PRK06225 304 VYP----------------SHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYT----SKR----------------F 347 (380)
T ss_pred cCC----------------CCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCccc----CcC----------------C
Confidence 222 145677887643 223467787777778887765321 110 1
Q ss_pred CCCeEEEEecc--CCHHHHHHHHHHHHhc
Q 019543 310 TEDLVRISVGI--EDVNDLISDLDKALRT 336 (339)
Q Consensus 310 ~~~~lRisvg~--e~~~~li~~l~~al~~ 336 (339)
.++.+|+|++. |+.++.++.|.+++++
T Consensus 348 ~~~~iR~s~~~~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 348 GDRYIRVSFSIPREQVEVFCEEFPDVVET 376 (380)
T ss_pred CCceEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 34689999987 3455556666665543
No 121
>PLN02187 rooty/superroot1
Probab=99.74 E-value=6.1e-16 Score=151.45 Aligned_cols=241 Identities=13% Similarity=0.079 Sum_probs=147.3
Q ss_pred chHHHHHHHHHhHhC--------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 55 PTRDALESLLAKLDK--------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g--------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
....+|++.+|++++ .+++++++++++|+..++ .+++|||+|++++|.|+.......
T Consensus 108 ~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~ 187 (462)
T PLN02187 108 AGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPE 187 (462)
T ss_pred CChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccc
Confidence 345667888887763 346777777799998655 478999999999999887543222
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc-cCC---C
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL-ELG---A 144 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~-~~~---~ 144 (339)
++|+++|++||++||+||+|+..++.. ++ ... -
T Consensus 188 ~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~ 267 (462)
T PLN02187 188 KEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVP 267 (462)
T ss_pred cCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCc
Confidence 889999999999999999997543321 11 111 1
Q ss_pred eEEEeccccccccCCCceEEEEEEc-ChhH---HHHHHHHHHhcCC--CCChHHHHHHHhchh-----hHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVK-GERL---AKELYFLQNAEGS--GLAPFDCWICLRGVK-----TMALRVEKQQDN 213 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~-~~~l---~~~l~~~~~~~~~--~~~~~~a~~~~~~l~-----~~~~r~~~~~~~ 213 (339)
-|+++||||.++.+|.+ .||++++ ++.+ ++.+...+..++. ..+.+...++...|+ .+...++...++
T Consensus 268 vi~l~SfSK~f~~pGlR-iG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~ 346 (462)
T PLN02187 268 VLTLAGISKGWVVPGWK-IGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHN 346 (462)
T ss_pred EEEEecchhhcCCccce-eEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 37889999999988865 5677764 3322 2344444444333 234444333333332 245556667778
Q ss_pred HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-----HHHHHHHcc-CCcceeecccCCcccc
Q 019543 214 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVVET-TKYFSITVSFGSVKSL 287 (339)
Q Consensus 214 a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-----~~~~~~~~~-L~~~~i~v~~G~~~s~ 287 (339)
.+.+.+.|+.++.+..+..| ..+..+++.+... ....+++.. +++.|+.+..|..+.
T Consensus 347 r~~l~~~L~~~~~~~~~~~P----------------~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg- 409 (462)
T PLN02187 347 VDLVCDRLKDIPCVVCPKKP----------------ESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALG- 409 (462)
T ss_pred HHHHHHHHhhCCCCcCCCCC----------------CEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccC-
Confidence 88899999887643211122 1234555544311 112344433 366788877664321
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEeccCC--HHHHHHHHHHHHh
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED--VNDLISDLDKALR 335 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~--~~~li~~l~~al~ 335 (339)
.++.+||+++... .++-+++|.+.++
T Consensus 410 ----------------------~~~~iRis~~~~~e~l~~al~rL~~~l~ 437 (462)
T PLN02187 410 ----------------------LKNWMRITIGVEAHMLEDALERLKGFCT 437 (462)
T ss_pred ----------------------CCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 1367999999642 2333455555443
No 122
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.74 E-value=6.3e-16 Score=148.10 Aligned_cols=222 Identities=14% Similarity=0.113 Sum_probs=144.1
Q ss_pred HHHHHHHHhHh----C----CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 58 DALESLLAKLD----K----ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 58 ~~le~~la~~~----g----~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
.+|++.+++++ | .+++++++++++|+..++ ++++|||+|+++++.|.+....+.
T Consensus 69 ~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 148 (384)
T PRK06348 69 VELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGF 148 (384)
T ss_pred HHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCC
Confidence 45666666654 2 356778888899998644 578999999999998876543322
Q ss_pred ------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c---cc--CCCeEE
Q 019543 112 ------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P---LE--LGADIV 147 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~---~~--~~~Di~ 147 (339)
++|+++|++||++||+|++|+...+.. + +. ....|+
T Consensus 149 ~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~ 228 (384)
T PRK06348 149 QINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTIT 228 (384)
T ss_pred cCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEE
Confidence 889999999999999999997543221 1 11 123588
Q ss_pred EeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHHHHHhC
Q 019543 148 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 148 ~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~~L~~ 223 (339)
+.||||.++.+| .+.||+++++ ++.+.++..........++....++...++. ++...+..+++.+.+.+.|+.
T Consensus 229 ~~SfSK~~~l~G-lRiG~~v~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~ 306 (384)
T PRK06348 229 FGSFSKDFAMTG-WRIGYVIAPD-YIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIES 306 (384)
T ss_pred EecchhccCCcc-ccceeeecCH-HHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999998666 4567888764 6777777766554555566544444333322 233344556667778888887
Q ss_pred CCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCC-HHHHHHHHccC-CcceeecccCCcccceeccccccCCCCC
Q 019543 224 HPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGS-LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIP 300 (339)
Q Consensus 224 ~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~-~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~~~ 300 (339)
+++++ +..| .++ .+++.+.. .....+|++.+ +..|+.+..|..+..
T Consensus 307 ~~~~~-~~~p-----------------~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~------------- 355 (384)
T PRK06348 307 IPNLS-LHPP-----------------KGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGE------------- 355 (384)
T ss_pred CCCce-eccC-----------------CeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhcc-------------
Confidence 66542 2212 234 55776642 22345677665 456888876654310
Q ss_pred HHHHHhCCCCCCeEEEEecc
Q 019543 301 VEVRQARGLTEDLVRISVGI 320 (339)
Q Consensus 301 ~~~~~~~g~~~~~lRisvg~ 320 (339)
..++.+|||++.
T Consensus 356 --------~~~~~iRi~~~~ 367 (384)
T PRK06348 356 --------SGEGYIRLACTV 367 (384)
T ss_pred --------CCCCeEEEEecC
Confidence 024679999974
No 123
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.74 E-value=1.5e-16 Score=150.04 Aligned_cols=234 Identities=17% Similarity=0.171 Sum_probs=153.9
Q ss_pred CCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH------------------
Q 019543 53 GNPTRDALESLLAKLDKAD--RALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
..+...+|++.++++++.+ +.++++++++++..+ ..++++||+|+++++.|+.......
T Consensus 52 ~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d 131 (346)
T TIGR01141 52 PDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLD 131 (346)
T ss_pred CCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCC
Confidence 3445689999999999853 456666667888654 4578999999999998765432211
Q ss_pred ------------------------------HHHHHHHHHc--CCEEEEeCCcCCCCCc-Ccc---c-CCCeEEEeccccc
Q 019543 112 ------------------------------RKIAEMAHAH--GALLLVDNSIMSPVLS-RPL---E-LGADIVMHSATKF 154 (339)
Q Consensus 112 ------------------------------~~I~~la~~~--g~~livD~a~a~g~~~-~~~---~-~~~Di~~~S~sK~ 154 (339)
+++.++|+.+ |+++|+|++|+..... .+. . ...+++++|+||+
T Consensus 132 ~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 211 (346)
T TIGR01141 132 LEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKA 211 (346)
T ss_pred HHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHh
Confidence 7788888777 9999999998732211 111 1 2235888999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCCCceEEe
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVN 231 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~ 231 (339)
++.+| ...|+++++ +++.+.++.... ....++.....+...++ .+....++..++.+++.+.|+.+++++ +
T Consensus 212 ~g~~G-~r~G~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~- 285 (346)
T TIGR01141 212 FGLAG-LRIGYAIAN-AEIIDALNKVRA--PFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLE-V- 285 (346)
T ss_pred hhchh-hhceeeecC-HHHHHHHHhccC--CCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCE-E-
Confidence 97665 446788876 467777665432 23344444333333332 244556667788888999998887654 2
Q ss_pred cCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCC
Q 019543 232 YAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 311 (339)
Q Consensus 232 ~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~ 311 (339)
.|. .+..++|.+.+ .+.+|.+.|...|+.+..|..+. +. +
T Consensus 286 ~~~----------------~g~~~~~~~~~--~~~~~~~~L~~~gI~v~~g~~f~---------------------~~-~ 325 (346)
T TIGR01141 286 YPS----------------DANFVLIRFPR--DADALFEALLEKGIIVRDLNSYP---------------------GL-P 325 (346)
T ss_pred CCC----------------cCCEEEEecCC--CHHHHHHHHHHCCeEEEeCCCcC---------------------CC-C
Confidence 231 35788888864 45677888877788877664211 11 4
Q ss_pred CeEEEEeccCCHHHHHHHHHHHHh
Q 019543 312 DLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 312 ~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+.+|+|++ .++.++.+.++|+
T Consensus 326 ~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 326 NCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred CeEEEecC---CHHHHHHHHHHhC
Confidence 78999988 3455677777653
No 124
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.74 E-value=4.6e-16 Score=148.64 Aligned_cols=253 Identities=15% Similarity=0.114 Sum_probs=154.8
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-Hhc---CCCCEEEEcCCCccchHHHHH-----------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLL---GTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll---~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
...+++++.+++++|++ .+++++||+.++..++ .++ .+||+|++++..|+.....+.
T Consensus 42 ~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~ 121 (379)
T TIGR03402 42 KAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEE 121 (379)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCC
Confidence 45678889999999975 4667778899987543 332 567899988776654432111
Q ss_pred ----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccc
Q 019543 112 ----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 156 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~ 156 (339)
++|.++|++||+++++|++|+.|... +....++|++++|.+|.+
T Consensus 122 g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~- 200 (379)
T TIGR03402 122 GRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLH- 200 (379)
T ss_pred CcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcC-
Confidence 89999999999999999999988542 333568999999999954
Q ss_pred cCCCceEEEEEEcChhHHHHHHHHH-------HhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHHHhC-C
Q 019543 157 GHSDVMAGVLAVKGERLAKELYFLQ-------NAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLAS-H 224 (339)
Q Consensus 157 g~~~~~gG~v~~~~~~l~~~l~~~~-------~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~L~~-~ 224 (339)
|+.+ .|+++.+++.. +.... .....+.+......+..+++ .++...++..++.+++.+.|++ +
T Consensus 201 gp~G--~g~l~v~~~~~---~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~ 275 (379)
T TIGR03402 201 GPKG--VGALYIRKGTR---FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARI 275 (379)
T ss_pred CCCc--eEEEEECCCCC---CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhC
Confidence 4433 46776665321 11100 00111222211111122222 2333344555667778888875 7
Q ss_pred CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHH
Q 019543 225 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVR 304 (339)
Q Consensus 225 ~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~ 304 (339)
++++... +. . ...+++++|.+.+.+ ..++.+.|...||.++.|...+. ..+. +....
T Consensus 276 ~~~~~~~-~~--~-----------~~~~~~~~~~~~~~~-~~~~~~~l~~~gI~v~~g~~c~~------~~~~--~~~~~ 332 (379)
T TIGR03402 276 PDARLNG-DP--T-----------KRLPNTVNISFEYIE-GEAILLLLDMEGICASSGSACTS------GSLE--PSHVL 332 (379)
T ss_pred CCEEEeC-CC--c-----------cCCCCEEEEEecCCC-HHHHHHhhccCCEEEEchhhcCC------CCCC--cCHHH
Confidence 7764322 21 0 012357777664332 35677888888999997753221 1111 11223
Q ss_pred HhCCCC----CCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 305 QARGLT----EDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 305 ~~~g~~----~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+|.. ++.||+|++..++++.|+.+.++|++
T Consensus 333 ~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~ 368 (379)
T TIGR03402 333 RAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP 368 (379)
T ss_pred HHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 345543 47899999998888888888888764
No 125
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.74 E-value=7.4e-16 Score=145.77 Aligned_cols=208 Identities=18% Similarity=0.128 Sum_probs=133.1
Q ss_pred HHHHHHHHHhHh----C----CC-eEEEcCcHHHHHHHH-HHhcCCC---CEEEEcCCCccchHHHHH------------
Q 019543 57 RDALESLLAKLD----K----AD-RALCFTSGMAALAAV-THLLGTG---EEIVAGDDLYGGTDRLLS------------ 111 (339)
Q Consensus 57 ~~~le~~la~~~----g----~~-~~l~~~sG~~A~~~i-l~ll~~G---D~Vi~~~~~y~~~~~~~~------------ 111 (339)
...|++.+++++ | .+ ++++++++++|+..+ ..++++| |+|++++|.|......++
T Consensus 38 ~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~ 117 (350)
T TIGR03537 38 TKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLK 117 (350)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccC
Confidence 345556665553 5 23 455555668888754 4578887 699999998876553322
Q ss_pred -----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc----cc--CCC
Q 019543 112 -----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP----LE--LGA 144 (339)
Q Consensus 112 -----------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~----~~--~~~ 144 (339)
++|+++|++||+++|+|++|+....... .. ..-
T Consensus 118 ~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 197 (350)
T TIGR03537 118 KEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIEN 197 (350)
T ss_pred cccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCC
Confidence 8899999999999999999975433221 11 122
Q ss_pred eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch---hhHHHHHHHHHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l---~~~~~r~~~~~~~a~~l~~~L 221 (339)
.|++.|+||.++.+| .+.|+++++ +.+.+.++..+..++...++....++...+ +.+..++++.+++.+.+.+.|
T Consensus 198 ~i~~~s~SK~~g~~G-lRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l 275 (350)
T TIGR03537 198 VLAFHSLSKRSGMTG-YRSGFVAGD-EKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFF 275 (350)
T ss_pred EEEEeecccccCCcc-ccceeeecC-HHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 488899999998766 456788765 478888887765556555544333332222 233445566677777888888
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCc
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSV 284 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~ 284 (339)
+.+ +++ +..| ..+..+++.+++.....++++.|...|+.+..|..
T Consensus 276 ~~~-g~~-~~~~----------------~g~~~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~~ 320 (350)
T TIGR03537 276 NKV-GLE-YLYP----------------DATFYLWVKVPSGIDAKDYALRLLENGIVVAPGEN 320 (350)
T ss_pred HHC-CCc-ccCC----------------CeEEEEEEECCCCCCHHHHHHHHHHCCEEEcCchh
Confidence 775 332 1111 12345777775433456788888777888776643
No 126
>PRK08068 transaminase; Reviewed
Probab=99.74 E-value=5.2e-16 Score=148.88 Aligned_cols=224 Identities=15% Similarity=0.087 Sum_probs=143.8
Q ss_pred hHHHHHHHHHhHh----C----CC-eEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 56 TRDALESLLAKLD----K----AD-RALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~----g----~~-~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
...+|++++++++ | .+ +.++++++++++..+ ..++++||+|++++|.|......++
T Consensus 71 g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~ 150 (389)
T PRK08068 71 GYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAE 150 (389)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccc
Confidence 3556777777765 4 23 466777778888754 4578999999999998876543222
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc--Cc---cc----CC
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS--RP---LE----LG 143 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~~--~~---~~----~~ 143 (339)
++|+++|++||++||+||+|+...+. .+ .. ..
T Consensus 151 ~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~ 230 (389)
T PRK08068 151 NNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKD 230 (389)
T ss_pred cCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccC
Confidence 78999999999999999999642221 11 11 12
Q ss_pred CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch----hhHHHHHHHHHHHHHHHHH
Q 019543 144 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAE 219 (339)
Q Consensus 144 ~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l----~~~~~r~~~~~~~a~~l~~ 219 (339)
..+++.||||.++.+| .+.||++++ +++++.+......+....++.....+...+ +.++..+++..++.+.+.+
T Consensus 231 ~~i~~~S~SK~~g~~G-lRiG~~~~~-~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~ 308 (389)
T PRK08068 231 VGIELYTLSKTFNMAG-WRVAFAVGN-ESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFIS 308 (389)
T ss_pred CEEEEecchhccCCcc-ceeEeEecC-HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 3489999999998766 456788775 478888877765555444433222222222 2344556666677778888
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCCHHHHHHHHccCCc-ceeecccCCcccceeccccccCC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHA 297 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~~~~~~~~~~L~~-~~i~v~~G~~~s~~~~p~~~~h~ 297 (339)
.|+.+ ++. +. | ..++ .+++.+.+...+.+|.+.|.. .|+.+..|..+. +
T Consensus 309 ~L~~~-g~~-~~-~----------------~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~----~------ 359 (389)
T PRK08068 309 ACREI-GWE-VD-A----------------PKGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFG----E------ 359 (389)
T ss_pred HHHHC-CCc-cc-C----------------CCeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhC----c------
Confidence 88776 332 11 1 1344 467777543345678887754 688877664321 0
Q ss_pred CCCHHHHHhCCCCCCeEEEEeccC
Q 019543 298 SIPVEVRQARGLTEDLVRISVGIE 321 (339)
Q Consensus 298 ~~~~~~~~~~g~~~~~lRisvg~e 321 (339)
..++.+||+++..
T Consensus 360 -----------~~~~~iRi~~~~~ 372 (389)
T PRK08068 360 -----------HGEGYVRVGLLTD 372 (389)
T ss_pred -----------cCCCeEEEEEcCC
Confidence 0246899999864
No 127
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=1.2e-16 Score=146.76 Aligned_cols=259 Identities=24% Similarity=0.242 Sum_probs=166.0
Q ss_pred CCCcccCC--CCchHHHHHH----HHHhHhCCCeEEEc-CcHHHHHHH-HHHhcCCCCEEEEcCCCccchH---------
Q 019543 45 GPYDYTRS--GNPTRDALES----LLAKLDKADRALCF-TSGMAALAA-VTHLLGTGEEIVAGDDLYGGTD--------- 107 (339)
Q Consensus 45 ~~~~y~r~--~~~~~~~le~----~la~~~g~~~~l~~-~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~--------- 107 (339)
.+|..-|+ +...++++|+ +..++||++.+-+- .||..||.+ .++|++|||.|+-.+...+|..
T Consensus 56 EGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~s 135 (413)
T COG0112 56 EGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFS 135 (413)
T ss_pred cCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCcc
Confidence 34555554 5667777775 44579999987765 499999986 5679999999998765443321
Q ss_pred ------------------------HHHH--------------------HHHHHHHHHcCCEEEEeCCc-----CCCCCcC
Q 019543 108 ------------------------RLLS--------------------RKIAEMAHAHGALLLVDNSI-----MSPVLSR 138 (339)
Q Consensus 108 ------------------------~~~~--------------------~~I~~la~~~g~~livD~a~-----a~g~~~~ 138 (339)
.... +++.++|++.|++|++|-+| +.|.+.+
T Consensus 136 G~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~ 215 (413)
T COG0112 136 GKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPN 215 (413)
T ss_pred ceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCC
Confidence 0000 99999999999999999999 4567788
Q ss_pred cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHH---HHHH---Hhchh-hHHHHHHHHH
Q 019543 139 PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD---CWIC---LRGVK-TMALRVEKQQ 211 (339)
Q Consensus 139 ~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~---a~~~---~~~l~-~~~~r~~~~~ 211 (339)
|++. +|++++|.+|+|.|| +||+|.++++++.+++.... +.|..-.|+. |+.+ ...++ .+.+..++..
T Consensus 216 P~~~-AdvVTtTTHKTlrGP---rGG~Il~~~eel~kkin~aV-FPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv 290 (413)
T COG0112 216 PLPH-ADVVTTTTHKTLRGP---RGGIILTNDEELAKKINSAV-FPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVV 290 (413)
T ss_pred CCCc-cceEeCCcccCCCCC---CceEEEeccHHHHHHhhhhc-CCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 9987 999999999999976 68999999867777776532 2233334433 2222 12222 3467778888
Q ss_pred HHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCCcceeecccCCcccce--
Q 019543 212 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLI-- 288 (339)
Q Consensus 212 ~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~~~~i~v~~G~~~s~~-- 288 (339)
+|++.|++.|.+. +++.+. + ...++++-+.+.+. -......+.|...+|.++--.. ..
T Consensus 291 ~NAkaLAe~l~~~-G~~vvs--G--------------gTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~i--P~D~ 351 (413)
T COG0112 291 KNAKALAEALKER-GFKVVS--G--------------GTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAI--PFDP 351 (413)
T ss_pred HHHHHHHHHHHHc-CCeEec--C--------------CccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCC--CCCC
Confidence 9999999999985 444443 2 22456777766421 1122233334455666653210 00
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..|..++- .+.| .+..-|..++.++.+++.+-+.++|+.
T Consensus 352 ~~p~~tSG--------IRiG-tpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 352 ESPFVTSG--------IRIG-TPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred CCCCCCcc--------ceec-cHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 01111110 1122 223445666777888888888888764
No 128
>PRK08912 hypothetical protein; Provisional
Probab=99.74 E-value=5.4e-16 Score=148.66 Aligned_cols=225 Identities=16% Similarity=0.083 Sum_probs=141.7
Q ss_pred HHHHHHHHhHh----C----CC-eEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 58 DALESLLAKLD----K----AD-RALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 58 ~~le~~la~~~----g----~~-~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
.+|++.+++++ | .+ ++++++++++|+.++ ..+++|||+|+++++.|......++
T Consensus 66 ~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 145 (387)
T PRK08912 66 PELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHW 145 (387)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccC
Confidence 45566666543 4 23 566777778998754 4578999999999998876543322
Q ss_pred ------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc----c-CCCeE
Q 019543 112 ------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL----E-LGADI 146 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~----~-~~~Di 146 (339)
++|+++|++||+++|+|++|+...+.. ++ . ...++
T Consensus 146 ~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i 225 (387)
T PRK08912 146 RLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTV 225 (387)
T ss_pred cCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceE
Confidence 779999999999999999986433211 11 1 13469
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch----hhHHHHHHHHHHHHHHHHHHHh
Q 019543 147 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l----~~~~~r~~~~~~~a~~l~~~L~ 222 (339)
+++|+||.++.+| .+.|++++++ ++++.+.......+...++.....+...+ +.+....++..++.+++.+.|+
T Consensus 226 ~~~S~SK~~g~~G-lRiG~~~~~~-~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 303 (387)
T PRK08912 226 KIGSAGKIFSLTG-WKVGFVCAAP-PLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLR 303 (387)
T ss_pred EEeechhhccCcC-ceeEEEecCH-HHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998666 4567888764 67777776655444444443333222222 2234445556677788888888
Q ss_pred CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC---HHHHHHHHccC-CcceeecccCCcccceeccccccCCC
Q 019543 223 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHAS 298 (339)
Q Consensus 223 ~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~---~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~ 298 (339)
.+ ++. + +|. ..+..+++.+.. .....+|++.| +..|+.+..|..+... .
T Consensus 304 ~~-g~~-~-~~~---------------~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~-~-------- 356 (387)
T PRK08912 304 RI-GFP-V-LPS---------------QGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEE-D-------- 356 (387)
T ss_pred hC-CCc-c-cCC---------------CcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCC-C--------
Confidence 76 332 1 121 124567777643 12345677775 5678887766432110 0
Q ss_pred CCHHHHHhCCCCCCeEEEEeccC
Q 019543 299 IPVEVRQARGLTEDLVRISVGIE 321 (339)
Q Consensus 299 ~~~~~~~~~g~~~~~lRisvg~e 321 (339)
-..+.+|||++..
T Consensus 357 ----------~~~~~iRl~~~~~ 369 (387)
T PRK08912 357 ----------PVTSVVRFCFAKR 369 (387)
T ss_pred ----------CCCCEEEEEEeCC
Confidence 0246899999974
No 129
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.74 E-value=7.8e-16 Score=148.59 Aligned_cols=237 Identities=12% Similarity=0.107 Sum_probs=147.8
Q ss_pred HHHHHHHHHhHh----CC-----C-eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 57 RDALESLLAKLD----KA-----D-RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~----g~-----~-~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
..+|++.+++++ |. + ++++++++++|+..++ .++++||+|++++|.|......++
T Consensus 83 ~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~ 162 (410)
T PRK06290 83 IQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEE 162 (410)
T ss_pred cHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCC
Confidence 446666666653 42 3 3555555578887654 578999999999999876543322
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C--cc-c----CCC
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R--PL-E----LGA 144 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~--~~-~----~~~ 144 (339)
++|+++|++||++||+||+|+...+. . .. . ...
T Consensus 163 ~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~ 242 (410)
T PRK06290 163 NNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEV 242 (410)
T ss_pred cCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCcccc
Confidence 78999999999999999999754321 1 11 1 134
Q ss_pred eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L 221 (339)
+|++.||||.++.+| .+.||++++ +++++.+.......+...+.....++...|+ .+....++..++.+.+.+.|
T Consensus 243 ~I~i~SfSK~~g~~G-lRiG~ii~~-~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L 320 (410)
T PRK06290 243 GVEIHSLSKAYNMTG-WRLAFVVGN-ELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKIL 320 (410)
T ss_pred EEEEeechhhcCCch-hheEeEEeC-HHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999998766 456788876 4677777766544443333333333333332 24445666677788888888
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-------HHHHHHHccCCcceeecccCCcccceeccccc
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-------ALSKHVVETTKYFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~ 294 (339)
+.+ ++. +..| ..+..+++.+.+. ....+|++.|...++.+. .|..
T Consensus 321 ~~~-g~~-~~~p----------------~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~---------~p~~- 372 (410)
T PRK06290 321 NEV-GFK-AEMP----------------GGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLIST---------VPWD- 372 (410)
T ss_pred HhC-CCe-ecCC----------------CeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEE---------ECCc-
Confidence 876 332 1111 0234456666432 235678887765543221 1211
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEec-----cCCHHHHHHHHHHHHhcC
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLISDLDKALRTG 337 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg-----~e~~~~li~~l~~al~~~ 337 (339)
-..+.+||+++ .|+.+.+++.|.++|..+
T Consensus 373 --------------~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 373 --------------DAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred --------------cccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 01257999996 456677888888888654
No 130
>PRK10534 L-threonine aldolase; Provisional
Probab=99.73 E-value=1.5e-16 Score=149.29 Aligned_cols=205 Identities=19% Similarity=0.201 Sum_probs=138.8
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCC----ccc--hH------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDL----YGG--TD------------------ 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~----y~~--~~------------------ 107 (339)
.+|...+||+.+++++|.+.++++++|++++.. ++.++.|||+|+++.+. |.. ..
T Consensus 32 ~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (333)
T PRK10534 32 DDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTL 111 (333)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCC
Confidence 578999999999999999999999999988864 55678999999986542 211 10
Q ss_pred ------HHH--------H--------------------HHHHHHHHHcCCEEEEeCCcCCCCC---cCc---ccCCCeEE
Q 019543 108 ------RLL--------S--------------------RKIAEMAHAHGALLLVDNSIMSPVL---SRP---LELGADIV 147 (339)
Q Consensus 108 ------~~~--------~--------------------~~I~~la~~~g~~livD~a~a~g~~---~~~---~~~~~Di~ 147 (339)
..+ + ++|+++|++||++|++||+|..+.. ... +....|.+
T Consensus 112 d~~~l~~~i~~~~~~~~~~~lv~l~np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~ 191 (333)
T PRK10534 112 PLDKVAAKIKPDDIHFARTRLLSLENTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSF 191 (333)
T ss_pred CHHHHHHhhcccCcCcccceEEEEecCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEE
Confidence 011 1 5667899999999999999763211 111 11234766
Q ss_pred EeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCC--hHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCC
Q 019543 148 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA--PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 148 ~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~--~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
+.||||.++.. .||+++++ +++++.++.++..++..++ ...++.+...++...+++++..++++++.+.|+++
T Consensus 192 ~~s~SK~~~~~---~G~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L~~~- 266 (333)
T PRK10534 192 TICLSKGLGTP---VGSLLVGN-RDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLAEQLREA- 266 (333)
T ss_pred EEEeEcCCCCc---ccceEEcC-HHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC-
Confidence 77999998842 56677665 5788888877765543333 23344455556654566666767788999999886
Q ss_pred CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeeccc
Q 019543 226 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSF 281 (339)
Q Consensus 226 ~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~ 281 (339)
++. + +| +.+..+.+.+++. ...++.+.|++.|+.++.
T Consensus 267 g~~-~-~~----------------~~~nfv~~~~~~~-~~~~~~~~l~~~gi~v~~ 303 (333)
T PRK10534 267 GAD-V-MR----------------QDTNMLFVRVGEE-QAAALGEYMRERNVLINA 303 (333)
T ss_pred CCc-c-CC----------------CCceEEEEECCch-hHHHHHHHHHHcCeeecC
Confidence 432 1 22 1456777777642 345777788888887653
No 131
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.73 E-value=7.4e-16 Score=147.59 Aligned_cols=222 Identities=13% Similarity=0.055 Sum_probs=138.5
Q ss_pred HHHHHHHHhHh----CC----Ce-EEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 58 DALESLLAKLD----KA----DR-ALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 58 ~~le~~la~~~----g~----~~-~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
.+|++.+++++ |. ++ +++++++++|+..++ .+++|||+|++++|.|......++
T Consensus 72 ~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g 151 (385)
T PRK09276 72 LEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENG 151 (385)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCC
Confidence 45555555554 42 33 444455588887654 478999999999998875443221
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc----Ccc-c----CCCe
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS----RPL-E----LGAD 145 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~----~~~-~----~~~D 145 (339)
++|+++|++||++||+|++|....+. ..+ . ....
T Consensus 152 ~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 231 (385)
T PRK09276 152 FLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVG 231 (385)
T ss_pred CcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCE
Confidence 88999999999999999999743321 111 1 1235
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~L 221 (339)
|++.||||.+|.+|. +.||++++ +++++.+...+...+...++.....+...++ .++...++.+++.+++.+.|
T Consensus 232 i~~~S~SK~~g~~Gl-RiG~~i~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 309 (385)
T PRK09276 232 IEFHSLSKTYNMTGW-RIGFAVGN-ADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGL 309 (385)
T ss_pred EEEecchhhcCCcch-hheeeeCC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999987764 45688776 4688888776654444444433333333332 23444555567778888888
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcccceeccccccCCCCC
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIP 300 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~~~ 300 (339)
+.. ++. +..| ..+..+++.+.+.....+|++.| +..|+.+..|..+. +
T Consensus 310 ~~~-~~~-~~~~----------------~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~----~--------- 358 (385)
T PRK09276 310 RKL-GLE-VEPP----------------KATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFG----E--------- 358 (385)
T ss_pred HhC-CCc-ccCC----------------CcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhC----C---------
Confidence 875 332 1111 12344677775433445677765 35688877664321 0
Q ss_pred HHHHHhCCCCCCeEEEEecc
Q 019543 301 VEVRQARGLTEDLVRISVGI 320 (339)
Q Consensus 301 ~~~~~~~g~~~~~lRisvg~ 320 (339)
-.++.+|||++.
T Consensus 359 --------~~~~~~Ris~~~ 370 (385)
T PRK09276 359 --------YGEGYFRIALTV 370 (385)
T ss_pred --------CCCCeEEEEeCC
Confidence 024689999985
No 132
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.73 E-value=2.4e-16 Score=148.07 Aligned_cols=238 Identities=14% Similarity=0.098 Sum_probs=150.0
Q ss_pred ccCCCCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 49 YTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 49 y~r~~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
..|+..+...+|++.+|+++|.+ .+++++++++++..++.+++||+ |++.+|.|......++
T Consensus 34 ~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~~~~~~-vv~~~P~y~~y~~~~~~~G~~v~~vp~~~~~ 112 (332)
T PRK06425 34 ISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSYINVGN-IIIVEPNFNEYKGYAFTHGIRISALPFNLIN 112 (332)
T ss_pred cccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhCCCc-EEEeCCChHHHHHHHHHcCCeEEEEeCCccc
Confidence 44556678899999999999854 56666666888886666678876 5555888876543332
Q ss_pred --------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--cc-----cCCCeEEEeccc
Q 019543 112 --------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR--PL-----ELGADIVMHSAT 152 (339)
Q Consensus 112 --------------------------------~~I~~la~~~g~~livD~a~a~g~~~~--~~-----~~~~Di~~~S~s 152 (339)
++|+++|++||++||+||++....... .. ...--|++.|||
T Consensus 113 ~~~~~l~~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfS 192 (332)
T PRK06425 113 NNPEILNNYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLT 192 (332)
T ss_pred CcHHHHhhcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecH
Confidence 888999999999999999986433211 11 112248889999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHh-chhhH-HHHHHHHHHHHHHHHHHHhCCCCceEE
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR-GVKTM-ALRVEKQQDNAQKIAEFLASHPRVKKV 230 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~-~l~~~-~~r~~~~~~~a~~l~~~L~~~~~i~~v 230 (339)
|.++.+|. +.||+++++ ++++.+..... .+.++...+..+.. ..+.. ...++..+++.+++.+.|+.+ ++..
T Consensus 193 K~~~l~Gl-RiGy~v~~~-~li~~l~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~- 266 (332)
T PRK06425 193 KILGIPSL-RIGYIATDD-YNMKISRKITE--PWSVCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRA- 266 (332)
T ss_pred HhcCCchh-hheeeecCH-HHHHHHHHcCC--CCccCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEE-
Confidence 99997775 456887764 67777765432 22233332222211 12222 334555667777888888876 3321
Q ss_pred ecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCC
Q 019543 231 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 310 (339)
Q Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~ 310 (339)
..| +.|..+++.++ ...+|.+.|...|+.+..|..+. + ..
T Consensus 267 ~~~----------------~~g~f~~~~~~---~~~~~~~~l~~~gi~v~~~~~f~----~-----------------~~ 306 (332)
T PRK06425 267 AGD----------------PSANFITFMIP---DAHDFYSYLLKNGILVRLLDDYE----C-----------------LG 306 (332)
T ss_pred CCC----------------CCceEEEEEcC---CHHHHHHHHHHCCeEEEECCCCC----C-----------------CC
Confidence 112 14567788775 24567777766788877654321 0 12
Q ss_pred CCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 311 EDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 311 ~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
++.+|||++..+. .+.|.+||++
T Consensus 307 ~~~iRis~~~~~~---~~~l~~al~~ 329 (332)
T PRK06425 307 EQYIRIAIRRRSF---NIKLVNALRN 329 (332)
T ss_pred CCEEEEEeCCHHH---HHHHHHHHHH
Confidence 4689999996432 2355555543
No 133
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.73 E-value=1.2e-15 Score=146.57 Aligned_cols=244 Identities=18% Similarity=0.156 Sum_probs=148.9
Q ss_pred hHHHHHHHHHhHh-------CCCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 56 TRDALESLLAKLD-------KADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~-------g~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
...+|++.+++++ ..++++++++|++|+..++ .+++|||+|+++++.|......++
T Consensus 67 g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g 146 (397)
T PRK07568 67 GIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEG 146 (397)
T ss_pred CCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccC
Confidence 3567778888775 2456778888899997644 478999999999887754332111
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C----cccC----CC
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R----PLEL----GA 144 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~----~~~~----~~ 144 (339)
++|+++|+++|+++|+|++++...+. . .... .-
T Consensus 147 ~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~ 226 (397)
T PRK07568 147 FHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDR 226 (397)
T ss_pred CCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCC
Confidence 78999999999999999999643221 1 1111 12
Q ss_pred eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEF 220 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~ 220 (339)
-+++.|+||.++.+|. +.|+++++++++++.+...... ....+.....++...++ .+....+..+++.+.+.+.
T Consensus 227 ~i~~~S~SK~~~~~G~-R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 304 (397)
T PRK07568 227 VIIIDSVSKRYSACGA-RIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEE 304 (397)
T ss_pred EEEEecchhhccCCCc-ceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3889999999997764 5677777655676666544322 23444444333333332 2344455567778888889
Q ss_pred HhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC------cceeecccCCcccceeccccc
Q 019543 221 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK------YFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 221 L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~------~~~i~v~~G~~~s~~~~p~~~ 294 (339)
|+.++++. +..|. .+..+++.+... ...+|++.|. ..|+.+..|..+.. .+
T Consensus 305 L~~~~~~~-~~~p~----------------g~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~--~~--- 361 (397)
T PRK07568 305 LNKIPGVV-CEKPK----------------GAFYIIAKLPVD-DAEDFAKWLLTDFNYNGETVMVAPASGFYA--TP--- 361 (397)
T ss_pred HhcCCCce-ecCCC----------------cceEEEEecCCC-CHHHHHHHHHhhcccccceEEEeCchHhcC--CC---
Confidence 98876543 22221 233467777432 2345555442 25677666543210 01
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEeccC--CHHHHHHHHHHHHhcC
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVGIE--DVNDLISDLDKALRTG 337 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg~e--~~~~li~~l~~al~~~ 337 (339)
+...+.+|||++.. +.++.++.|.+++++.
T Consensus 362 -------------~~~~~~iRls~~~~~~~~~~~~~~l~~~l~~~ 393 (397)
T PRK07568 362 -------------GLGKNEIRIAYVLNEEDLKRAMEILKEALEKY 393 (397)
T ss_pred -------------CCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 11346899999753 3445566666666543
No 134
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.73 E-value=7.5e-16 Score=144.60 Aligned_cols=196 Identities=18% Similarity=0.140 Sum_probs=131.7
Q ss_pred HHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH--------------------------
Q 019543 58 DALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS-------------------------- 111 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------------- 111 (339)
..|++.+++++|.++.++++++++|+..++ .+.|||+|++++|.|+.....++
T Consensus 52 ~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~-~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~v~l 130 (330)
T PRK05664 52 DGLEAAARAYYGAPQLLPVAGSQAAIQALP-RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEAEVEAALDSLDVLVV 130 (330)
T ss_pred HHHHHHHHHHhCCCCEEECcCHHHHHHHHH-HccCCCEEEEcCCChHHHHHHHHHcCCeEEEechhhHhhhhcCCCEEEE
Confidence 689999999999988888888889987654 46899999999999987765433
Q ss_pred ----------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc---cc-CCCeEEEeccccccccCCCceEEEEEEcCh
Q 019543 112 ----------------RKIAEMAHAHGALLLVDNSIMSPVLSRP---LE-LGADIVMHSATKFIAGHSDVMAGVLAVKGE 171 (339)
Q Consensus 112 ----------------~~I~~la~~~g~~livD~a~a~g~~~~~---~~-~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~ 171 (339)
++|+++|+++|++||+||++........ +. ..--+++.||||.+|.+|. +.||++++ +
T Consensus 131 ~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~Gl-RiG~~v~~-~ 208 (330)
T PRK05664 131 VNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGA-RLGFVLAE-P 208 (330)
T ss_pred eCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCc-ceEEEEeC-H
Confidence 7788888999999999999964321111 11 1123889999999997764 55788876 4
Q ss_pred hHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhc
Q 019543 172 RLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 248 (339)
Q Consensus 172 ~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~ 248 (339)
++++.+..... .+.++.....++...|+ .....+++..++.+++.+.|+.+. +. |.
T Consensus 209 ~l~~~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~----~~-------------- 267 (330)
T PRK05664 209 ALLRALAELLG--PWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHG-LT----PA-------------- 267 (330)
T ss_pred HHHHHHHHhcC--CCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCC-Cc----cc--------------
Confidence 67777776542 23345444333333333 234445566677788888888762 21 10
Q ss_pred CCCcceEEEeeCCHHHHHHHHccCCcceeecc
Q 019543 249 KGAGSVLSFLTGSLALSKHVVETTKYFSITVS 280 (339)
Q Consensus 249 ~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~ 280 (339)
.+.+..+++.+.+ ..+|.+.|...|+.+.
T Consensus 268 ~~~~~f~~~~~~~---~~~~~~~l~~~gi~v~ 296 (330)
T PRK05664 268 GGCALFQWVRTED---AAALHEFLARRGILTR 296 (330)
T ss_pred CCcceEEEEecCC---HHHHHHHHHHCCeEEE
Confidence 1223445555542 3567777777788775
No 135
>PRK07337 aminotransferase; Validated
Probab=99.73 E-value=8.1e-16 Score=147.51 Aligned_cols=225 Identities=18% Similarity=0.154 Sum_probs=144.2
Q ss_pred HHHHHHHHHhHh----C----CCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 57 RDALESLLAKLD----K----ADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~----g----~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
..+|++.+|+++ | .+++++++++++|+..+ ..++++||+|+++++.|.+....+.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 148 (388)
T PRK07337 69 LAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAER 148 (388)
T ss_pred CHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccC
Confidence 556777777765 3 24677777779998754 4578999999999999887653332
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cC---cccCCCe-EEEe
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SR---PLELGAD-IVMH 149 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~---~~~~~~D-i~~~ 149 (339)
++|+++|++||+++|+|+++..-.+ .. ....+.+ |++.
T Consensus 149 ~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~ 228 (388)
T PRK07337 149 FQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITIN 228 (388)
T ss_pred CcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEE
Confidence 8899999999999999999863222 11 1122223 6788
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch-----hhHHHHHHHHHHHHHHHHHHHhCC
Q 019543 150 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 150 S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l-----~~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
|+||.++.+|. +.||+++++ ++++.+.......+...+.....++...+ +.+.+..++.+++.+.+.+.|+.+
T Consensus 229 S~SK~~~~~G~-RiG~~~~~~-~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 306 (388)
T PRK07337 229 SFSKYFNMTGW-RLGWLVVPE-ALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL 306 (388)
T ss_pred echhhcCCchh-heeeeecCH-HHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999987764 467888764 67787777665544444544433332222 334444556667778888888875
Q ss_pred CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-----HHHHHHHcc-CCcceeecccCCcccceeccccccCCC
Q 019543 225 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVVET-TKYFSITVSFGSVKSLISMPCFMSHAS 298 (339)
Q Consensus 225 ~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-----~~~~~~~~~-L~~~~i~v~~G~~~s~~~~p~~~~h~~ 298 (339)
++.....| ..|..+++.+... ....+|++. ++..|+.+..|..+.. +
T Consensus 307 -~~~~~~~p----------------~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~---~------- 359 (388)
T PRK07337 307 -GFKVPVMP----------------DGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGP---H------- 359 (388)
T ss_pred -CCccccCC----------------CeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCC---C-------
Confidence 33211122 1355777777421 234566665 4567888776643211 0
Q ss_pred CCHHHHHhCCCCCCeEEEEecc
Q 019543 299 IPVEVRQARGLTEDLVRISVGI 320 (339)
Q Consensus 299 ~~~~~~~~~g~~~~~lRisvg~ 320 (339)
-.++.+|||++.
T Consensus 360 ----------~~~~~~Ri~~~~ 371 (388)
T PRK07337 360 ----------APRDYIRLSYAT 371 (388)
T ss_pred ----------CCCCEEEEEecC
Confidence 024789999997
No 136
>PRK09082 methionine aminotransferase; Validated
Probab=99.73 E-value=4.8e-16 Score=148.98 Aligned_cols=227 Identities=15% Similarity=0.078 Sum_probs=146.2
Q ss_pred chHHHHHHHHHhHhCCC-----eEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 55 PTRDALESLLAKLDKAD-----RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~-----~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
+.++++.+.+.+++|.. +.++++++++|+.. +..+++|||+|+++++.|.+....++
T Consensus 71 ~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 150 (386)
T PRK09082 71 ALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFR 150 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCccccc
Confidence 45677777777777752 45666667899875 44578999999999998876543332
Q ss_pred -----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----c-cc----CCCeEE
Q 019543 112 -----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----P-LE----LGADIV 147 (339)
Q Consensus 112 -----------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~-~~----~~~Di~ 147 (339)
++|.++|++||+++|+|++|+...+.. . .. ....++
T Consensus 151 ~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~ 230 (386)
T PRK09082 151 VDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFV 230 (386)
T ss_pred CCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEE
Confidence 889999999999999999996543311 1 11 123589
Q ss_pred EeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHHHhC
Q 019543 148 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 148 ~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~L~~ 223 (339)
++||||.++.+| .+.|+++++ +++++.++..........+.....++...++ .+...++...++.+.+.+.|+.
T Consensus 231 ~~S~SK~~~~~G-~RiG~iv~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 308 (386)
T PRK09082 231 VSSFGKTYHVTG-WKVGYCVAP-AALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALAN 308 (386)
T ss_pred Eeechhhccchh-hhhhhhhCC-HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999998766 456788876 4788888777654444555544433333332 2333445556778888888886
Q ss_pred CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--HHHHHHHHccC-CcceeecccCCcccceeccccccCCCCC
Q 019543 224 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIP 300 (339)
Q Consensus 224 ~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~~~ 300 (339)
. ++. + .|. ..+..+++.+.+ .....+|++.| +..|+.+..|..+.. .+
T Consensus 309 ~-~~~-~-~~~---------------~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~--~~--------- 359 (386)
T PRK09082 309 S-RFK-L-LPC---------------EGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYA--DP--------- 359 (386)
T ss_pred C-CCc-c-cCC---------------CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCC--CC---------
Confidence 4 332 1 111 123456666642 22345677764 567888776643210 01
Q ss_pred HHHHHhCCCCCCeEEEEecc
Q 019543 301 VEVRQARGLTEDLVRISVGI 320 (339)
Q Consensus 301 ~~~~~~~g~~~~~lRisvg~ 320 (339)
...+.+|||++.
T Consensus 360 --------~~~~~~Ri~~~~ 371 (386)
T PRK09082 360 --------FPHRLVRLCFAK 371 (386)
T ss_pred --------CCCCEEEEEecC
Confidence 134689999997
No 137
>PLN02651 cysteine desulfurase
Probab=99.73 E-value=6.4e-16 Score=146.98 Aligned_cols=247 Identities=16% Similarity=0.108 Sum_probs=149.8
Q ss_pred CchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-H----hcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 54 NPTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-H----LLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~----ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
....+++++.+++++|++ ..++++|++.|+..++ . ..++||+|++++..|+.....+.
T Consensus 42 ~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~ 121 (364)
T PLN02651 42 EDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK 121 (364)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC
Confidence 456788999999999975 4556666788876432 2 35789999998866654322111
Q ss_pred ------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEeccccc
Q 019543 112 ------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKF 154 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK~ 154 (339)
++|.++||+||+++++|++|+.|.. .+..++++|++++|.+|+
T Consensus 122 ~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~ 201 (364)
T PLN02651 122 SDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKI 201 (364)
T ss_pred CCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhh
Confidence 9999999999999999999998854 345567899999999997
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHH-------HhcCCCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHHHHHhC
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQ-------NAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~-------~~~~~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~~L~~ 223 (339)
+ ||.+ .|+++.+++ ....+.... .....+.+....+.+..+|+. .+...++..+..+++.+.|++
T Consensus 202 ~-gp~G--~g~l~v~~~-~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~ 277 (364)
T PLN02651 202 Y-GPKG--VGALYVRRR-PRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRA 277 (364)
T ss_pred C-CCCc--eEEEEEcCC-CCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 4 4432 467777653 323222111 011122222222222223332 233344455667777787775
Q ss_pred -CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHH
Q 019543 224 -HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 302 (339)
Q Consensus 224 -~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~ 302 (339)
.++++. ..|.-+. ....++++|.+.+.. ..++++.|.. |.++.|.. |.....+ +..
T Consensus 278 ~~~~~~i-~~~~~~~-----------~~~~~i~~~~~~~~~-~~~~~~~L~~--i~v~~g~~------c~~~~~~--~~~ 334 (364)
T PLN02651 278 KLGGVRV-NGPRDPE-----------KRYPGTLNLSFAYVE-GESLLMGLKE--VAVSSGSA------CTSASLE--PSY 334 (364)
T ss_pred hCCCEEE-ECCCCcc-----------cCcCCEEEEEeCCCC-HHHHHHHhCC--EEEEchhh------cCCCCCC--cCH
Confidence 577653 3331110 013569999885432 3467777765 88887752 2221111 012
Q ss_pred HHHhCCCC----CCeEEEEeccCCHHHHH
Q 019543 303 VRQARGLT----EDLVRISVGIEDVNDLI 327 (339)
Q Consensus 303 ~~~~~g~~----~~~lRisvg~e~~~~li 327 (339)
..+.+|+. .+.||+|++..++++.|
T Consensus 335 ~~~~~g~~~~~~~~~vR~S~~~~~t~~di 363 (364)
T PLN02651 335 VLRALGVPEEMAHGSLRLGVGRFTTEEEV 363 (364)
T ss_pred HHHHcCCChHHhCceEEEEcCCCCCHHHc
Confidence 23455654 37899999999988754
No 138
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=6.8e-16 Score=146.09 Aligned_cols=235 Identities=15% Similarity=0.167 Sum_probs=149.3
Q ss_pred CCCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 52 SGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
+.++...+|++.+|++++.+ ++++++++++++..++ .+++|||+|+++++.|.......+
T Consensus 56 y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 135 (351)
T PRK14807 56 YPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTY 135 (351)
T ss_pred CCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCC
Confidence 33455789999999999864 4555555577787654 478999999999998875433222
Q ss_pred --------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc---cc-CCCeEEEecccccc
Q 019543 112 --------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP---LE-LGADIVMHSATKFI 155 (339)
Q Consensus 112 --------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~---~~-~~~Di~~~S~sK~l 155 (339)
+++.++|++++.++|+|++|........ .. ..-.|+++||||.+
T Consensus 136 d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 215 (351)
T PRK14807 136 DVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAF 215 (351)
T ss_pred CHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhc
Confidence 8899999999999999999953221111 11 12358999999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh--hHHHHHHHHHHHHHHHHHHHhCCCCceEEecC
Q 019543 156 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK--TMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 233 (339)
Q Consensus 156 ~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~--~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p 233 (339)
+.+|. +.||++++ +++++.++..... ..++.....++...++ .+.++++...++.+++.+.|+..+++. + +|
T Consensus 216 ~~~Gl-RiG~~v~~-~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~-~-~~ 289 (351)
T PRK14807 216 GLAGL-RVGYAVAN-ENILKYLNLVKSP--YNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIK-V-YP 289 (351)
T ss_pred ccchh-ceeeeecC-HHHHHHHHHccCC--CCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-Cc
Confidence 86664 56788775 4677777654322 3344444444433333 344555566677777888887776653 2 23
Q ss_pred CCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCe
Q 019543 234 GLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDL 313 (339)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~ 313 (339)
. .++.+++.+.+. ..+.+.|...|+.++.+.. .+ + .++.
T Consensus 290 ~----------------~~~~~~i~~~~~---~~~~~~l~~~gV~v~~~~~-----~~----------------~-~~~~ 328 (351)
T PRK14807 290 S----------------KTNFILVKFKDA---DYVYQGLLERGILVRDFSK-----VE----------------G-LEGA 328 (351)
T ss_pred C----------------CccEEEEEcCCH---HHHHHHHHHCCEEEEECCC-----CC----------------C-CCCe
Confidence 1 356677777643 4566666666777652210 00 0 2367
Q ss_pred EEEEeccCCHHHHHHHHHHHHhc
Q 019543 314 VRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 314 lRisvg~e~~~~li~~l~~al~~ 336 (339)
+|||++..+. .+.|.++|++
T Consensus 329 iRis~~~~~~---~~~l~~~l~~ 348 (351)
T PRK14807 329 LRITVSSCEA---NDYLINGLKE 348 (351)
T ss_pred EEEEcCCHHH---HHHHHHHHHH
Confidence 9999996433 2355555554
No 139
>PRK07777 aminotransferase; Validated
Probab=99.73 E-value=1.3e-15 Score=146.06 Aligned_cols=226 Identities=17% Similarity=0.081 Sum_probs=140.5
Q ss_pred HHHHHHHHHhH----hCC----C-eEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 57 RDALESLLAKL----DKA----D-RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 57 ~~~le~~la~~----~g~----~-~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
..+|++.++++ +|. + +++++++|++|+.+ +..++++||+|+++.+.|++....+.
T Consensus 63 ~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 142 (387)
T PRK07777 63 IPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDG 142 (387)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCcc
Confidence 44566666554 553 2 47777777999975 45578999999999988865432221
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----ccc-----CC
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PLE-----LG 143 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~~-----~~ 143 (339)
++|+++|++||+++|+|++|+...+.. ++. .+
T Consensus 143 ~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 222 (387)
T PRK07777 143 RGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRE 222 (387)
T ss_pred CCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcC
Confidence 789999999999999999996433211 111 23
Q ss_pred CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch----hhHHHHHHHHHHHHHHHHH
Q 019543 144 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAE 219 (339)
Q Consensus 144 ~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l----~~~~~r~~~~~~~a~~l~~ 219 (339)
.++++.||||.++.+|. +.|++++++ ++++.+.......+...+.....++...+ +.+....+...++.+.+.+
T Consensus 223 ~~i~~~S~SK~~g~~Gl-RiG~~~~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 300 (387)
T PRK07777 223 RTVTISSAAKTFNVTGW-KIGWACGPA-PLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAA 300 (387)
T ss_pred cEEEEeechhhccCcCc-eeEEEecCH-HHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHH
Confidence 57999999999987664 456777764 67777776654333333322222222222 2234445566778888888
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--HHHHHHHHccC-CcceeecccCCcccceeccccccC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSH 296 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h 296 (339)
.|+.+ +++ + +|. ..+..+++.+.+ .....+|++.| +..|+.+..|..+... .+
T Consensus 301 ~L~~~-~~~-~-~~~---------------~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~-~~----- 356 (387)
T PRK07777 301 GLAEA-GFE-V-HDS---------------AGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDP-AD----- 356 (387)
T ss_pred HHHhC-CCC-c-cCC---------------CcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCC-Cc-----
Confidence 88875 332 1 121 123456666531 22356788888 4578888877543210 00
Q ss_pred CCCCHHHHHhCCCCCCeEEEEecc
Q 019543 297 ASIPVEVRQARGLTEDLVRISVGI 320 (339)
Q Consensus 297 ~~~~~~~~~~~g~~~~~lRisvg~ 320 (339)
-.++.+|||++.
T Consensus 357 ------------~~~~~~Ri~~~~ 368 (387)
T PRK07777 357 ------------AWNHLVRFAFCK 368 (387)
T ss_pred ------------CCCCeEEEEecC
Confidence 024689999996
No 140
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.73 E-value=2e-15 Score=146.59 Aligned_cols=225 Identities=16% Similarity=0.090 Sum_probs=139.5
Q ss_pred hHHHHHHHHHhHhC--------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 56 TRDALESLLAKLDK--------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g--------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
...+|++.++++++ .+++++++++++|+..++ .+++|||+|++++|.|........
T Consensus 95 G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~ 174 (430)
T PLN00145 95 GLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPER 174 (430)
T ss_pred cCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCccc
Confidence 45677788887764 256888888899998655 478999999999998876432111
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc---c-CCCe
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL---E-LGAD 145 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~---~-~~~D 145 (339)
++|+++|++||++||+|++|+...+.. ++ . ...-
T Consensus 175 ~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~v 254 (430)
T PLN00145 175 GWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPV 254 (430)
T ss_pred CCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcE
Confidence 789999999999999999997543321 11 1 1124
Q ss_pred EEEeccccccccCCCceEEEEEE-cChhHHHH---HHHHHHh--cCCCCChHHHHHHHhchh-----hHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAV-KGERLAKE---LYFLQNA--EGSGLAPFDCWICLRGVK-----TMALRVEKQQDNA 214 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~-~~~~l~~~---l~~~~~~--~~~~~~~~~a~~~~~~l~-----~~~~r~~~~~~~a 214 (339)
|+++||||.++.+|.++ ||+++ .++.+.+. +...... .+...+.+..+++...|+ .+...+++.+++.
T Consensus 255 i~~~S~SK~~~~pG~Rl-G~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~ 333 (430)
T PLN00145 255 LTLGSISKRWVVPGWRL-GWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETA 333 (430)
T ss_pred EEEeccccccCCCCeeE-EEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 88999999999888665 56665 33333332 1222222 222333444333333332 2455666777888
Q ss_pred HHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-----HHHHHHHHccC-CcceeecccCCcccce
Q 019543 215 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----LALSKHVVETT-KYFSITVSFGSVKSLI 288 (339)
Q Consensus 215 ~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-----~~~~~~~~~~L-~~~~i~v~~G~~~s~~ 288 (339)
+.+.+.|+.++++..+..|. .+..+++.++. .....+|+..| ++.++.+..|..+
T Consensus 334 ~~~~~~L~~~~g~~~~~~P~----------------ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~f--- 394 (430)
T PLN00145 334 DICYEKIKEIKCITCPHKPE----------------GSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSAL--- 394 (430)
T ss_pred HHHHHHHhcCCCCCCCcCCC----------------eeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCcccc---
Confidence 88889998877654333331 23445555532 11234566444 5567776655421
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEecc
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGI 320 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~ 320 (339)
| .++.+|||++.
T Consensus 395 -------------------g-~~~~lRis~~~ 406 (430)
T PLN00145 395 -------------------G-MKNWLRITFAI 406 (430)
T ss_pred -------------------C-CCCeEEEEeCC
Confidence 1 23689999996
No 141
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.72 E-value=1.2e-15 Score=146.62 Aligned_cols=230 Identities=13% Similarity=0.083 Sum_probs=140.2
Q ss_pred HHHHHHHHhHh----C----CCe-EEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 58 DALESLLAKLD----K----ADR-ALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 58 ~~le~~la~~~----g----~~~-~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
.+|++.+++++ | .++ +++++++++|+..+ ..+++|||+|++++|.|++....+.
T Consensus 76 ~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 155 (394)
T PRK05942 76 ASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPEND 155 (394)
T ss_pred HHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccC
Confidence 45666666554 4 233 55666668999754 4588999999999999876543221
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc----Cc---cc--CCCe
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS----RP---LE--LGAD 145 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~----~~---~~--~~~D 145 (339)
++|+++|++||++||+|++|+..... .. +. ....
T Consensus 156 ~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T PRK05942 156 WLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIG 235 (394)
T ss_pred CccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccE
Confidence 78999999999999999998643321 11 11 1235
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---h-HHHHHHHHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---T-MALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~-~~~r~~~~~~~a~~l~~~L 221 (339)
|+++||||.++.+| .+.|++++++ ++++.++......+...+.....++...++ . +...+++..++.+.+.+.|
T Consensus 236 i~~~SfSK~~~~~G-lRiG~i~~~~-~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L 313 (394)
T PRK05942 236 VEFHTLSKTYNMAG-WRVGFVVGNR-HIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGL 313 (394)
T ss_pred EEEecchhccCChh-hheeeeecCH-HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999998666 4567887764 788888876654444445443333333332 2 2334455566677777888
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCCHHHHHHHHcc-CCcceeecccCCcccceeccccccCCCC
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVET-TKYFSITVSFGSVKSLISMPCFMSHASI 299 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~~~~~~~~~~-L~~~~i~v~~G~~~s~~~~p~~~~h~~~ 299 (339)
+.. ++. +.-| .++ .+++.+.......+++.. ++..|+.+..|..+. +
T Consensus 314 ~~~-~~~-~~~~-----------------~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~----~-------- 362 (394)
T PRK05942 314 GEL-GWN-IPPT-----------------KATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFG----E-------- 362 (394)
T ss_pred HHC-CCe-ecCC-----------------CeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhC----c--------
Confidence 765 332 1111 244 567776432223345543 455688776664321 0
Q ss_pred CHHHHHhCCCCCCeEEEEeccCCHHHHHHHH
Q 019543 300 PVEVRQARGLTEDLVRISVGIEDVNDLISDL 330 (339)
Q Consensus 300 ~~~~~~~~g~~~~~lRisvg~e~~~~li~~l 330 (339)
..++.+|+|++. +.+.+.+.+
T Consensus 363 ---------~~~~~iRis~~~-~~~~l~~~l 383 (394)
T PRK05942 363 ---------GGEGYVRISLIA-DCDRLGEAL 383 (394)
T ss_pred ---------CCCCeEEEEecC-CHHHHHHHH
Confidence 024689999984 444443333
No 142
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.72 E-value=7.4e-16 Score=144.64 Aligned_cols=238 Identities=18% Similarity=0.171 Sum_probs=156.8
Q ss_pred cccCCCCchHHHHHHHHHhHhCCC-eEEEcCcH-HHHHHHHHHhcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 48 DYTRSGNPTRDALESLLAKLDKAD-RALCFTSG-MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 48 ~y~r~~~~~~~~le~~la~~~g~~-~~l~~~sG-~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
.+.++.++...+|++.+++++|.+ +.+++++| ++++.++..++.+| .|+++++.|......+.
T Consensus 40 ~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~d~~~ 118 (330)
T TIGR01140 40 AWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLLAPG-RVLVLAPTYSEYARAWRAAGHEVVELPDLDR 118 (330)
T ss_pred HHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHhCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeCCHHH
Confidence 355555666799999999999864 45555555 67777666667888 58888888876554332
Q ss_pred -----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcc-c----CCCeEEEecccccccc
Q 019543 112 -----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPL-E----LGADIVMHSATKFIAG 157 (339)
Q Consensus 112 -----------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~-~----~~~Di~~~S~sK~l~g 157 (339)
++|+++|++||++||+|++|........+ . ...+|+++|+||+++.
T Consensus 119 l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 198 (330)
T TIGR01140 119 LPAALEELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGL 198 (330)
T ss_pred HHhhcccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcC
Confidence 78899999999999999999644332111 1 2346999999999997
Q ss_pred CCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceEEecCC
Q 019543 158 HSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 234 (339)
Q Consensus 158 ~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~ 234 (339)
+| .+.|++++++ ++.+.+..+.. ....+.....++...++. .....++..++.+.+.+.|+.++.++. .|
T Consensus 199 ~G-~R~G~i~~~~-~~~~~l~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~- 271 (330)
T TIGR01140 199 AG-LRLGFVVAHP-ALLARLREALG--PWTVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEV--VG- 271 (330)
T ss_pred ch-hhhhheeCCH-HHHHHHHhcCC--CCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceE--CC-
Confidence 66 4457887764 57777665432 234455544444444432 234456667788888899988765431 22
Q ss_pred CCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeE
Q 019543 235 LPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 314 (339)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~l 314 (339)
+.+..+++.+.+ ..+|++.|...|+.+..|..+. +...+.+
T Consensus 272 ---------------~~~~f~~~~~~~---~~~l~~~l~~~gi~v~pg~~f~---------------------~~~~~~i 312 (330)
T TIGR01140 272 ---------------GTALFLLVRTPD---AAALHEALARRGILIRDFDNFP---------------------GLDPRYL 312 (330)
T ss_pred ---------------CCCeEEEEEcCC---HHHHHHHHHHCCEEEEECCCCC---------------------CCCCCEE
Confidence 135566776654 3467777777788777665321 0134689
Q ss_pred EEEeccCCHHHHHHHHHHHHh
Q 019543 315 RISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 315 Risvg~e~~~~li~~l~~al~ 335 (339)
|++++..+. + +.|.++|+
T Consensus 313 Ri~~~~~~~-~--~~~~~~l~ 330 (330)
T TIGR01140 313 RFALPTDEE-N--DRLEEALA 330 (330)
T ss_pred EEEecCHHH-H--HHHHHhhC
Confidence 999997552 2 57777664
No 143
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.72 E-value=1.1e-15 Score=144.63 Aligned_cols=204 Identities=13% Similarity=0.081 Sum_probs=135.7
Q ss_pred chHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 55 PTRDALESLLAKLDKA--DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
+...+|++.+|++++. +++++++++++|+..++ .+++|||+|++++|.|.......+
T Consensus 60 ~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~ 139 (353)
T PRK05387 60 PNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVE 139 (353)
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHH
Confidence 3457999999999975 45777777789998654 578999999999998865443222
Q ss_pred ------------------------HHHHHHHHHc-CCEEEEeCCcCCCCCcCc--c--cCCCeEEEeccccccccCCCce
Q 019543 112 ------------------------RKIAEMAHAH-GALLLVDNSIMSPVLSRP--L--ELGADIVMHSATKFIAGHSDVM 162 (339)
Q Consensus 112 ------------------------~~I~~la~~~-g~~livD~a~a~g~~~~~--~--~~~~Di~~~S~sK~l~g~~~~~ 162 (339)
+++.++++++ |+++|+||+|........ + .....++++||||.++.+|. +
T Consensus 140 ~l~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-R 218 (353)
T PRK05387 140 DYLRPNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGL-R 218 (353)
T ss_pred HHHhcCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhh-h
Confidence 7888888776 999999999853211111 1 12336999999999986664 4
Q ss_pred EEEEEEcChhHHHHHHHHHHhc-CCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCC
Q 019543 163 AGVLAVKGERLAKELYFLQNAE-GSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 238 (339)
Q Consensus 163 gG~v~~~~~~l~~~l~~~~~~~-~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~ 238 (339)
.|+++++ +++.+.++.....+ ...++.....++...++ .+++..++..++.+++.+.|+.+ ++. + +|.
T Consensus 219 ~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~---- 290 (353)
T PRK05387 219 VGFAIGH-PELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFE-V-LPS---- 290 (353)
T ss_pred ceeeecC-HHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCC----
Confidence 6788775 47878877665433 23455544443333332 24445566667788888888876 442 2 231
Q ss_pred CchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecc
Q 019543 239 PGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVS 280 (339)
Q Consensus 239 ~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~ 280 (339)
.+.++++.+.+ ....+|.+.|...|+.++
T Consensus 291 ------------~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~ 319 (353)
T PRK05387 291 ------------KANFVFARHPS-HDAAELAAKLRERGIIVR 319 (353)
T ss_pred ------------cCcEEEEECCC-CCHHHHHHHHHHCCEEEE
Confidence 35577777653 234577777777787764
No 144
>PRK02948 cysteine desulfurase; Provisional
Probab=99.72 E-value=1.5e-15 Score=145.16 Aligned_cols=256 Identities=16% Similarity=0.150 Sum_probs=155.3
Q ss_pred chHHHHHHHHHhHhCCC-eEEEc-CcHHHHHHHHH-Hhc----CCCCEEEEcCCCccchHHHH---H-------------
Q 019543 55 PTRDALESLLAKLDKAD-RALCF-TSGMAALAAVT-HLL----GTGEEIVAGDDLYGGTDRLL---S------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~-~~l~~-~sG~~A~~~il-~ll----~~GD~Vi~~~~~y~~~~~~~---~------------- 111 (339)
...+++++.+|+++|.+ +.+++ +++++++..++ .++ ++||+|++++..|+...... +
T Consensus 43 ~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~ 122 (381)
T PRK02948 43 SLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK 122 (381)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC
Confidence 46789999999999854 45554 55588886533 343 67999999875554332111 1
Q ss_pred -----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEecccccc
Q 019543 112 -----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 155 (339)
Q Consensus 112 -----------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l 155 (339)
++|.++|+++|+++++|++|+.|... +...+++|+++.|++|++
T Consensus 123 ~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~ 202 (381)
T PRK02948 123 SGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIY 202 (381)
T ss_pred CCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcC
Confidence 89999999999999999999877542 233568899999999988
Q ss_pred ccCCCceEEEEEEcChhHHHHHHH----HHHhcCCCCChHHHHHHHhch----hhHHHHHHHHHHHHHHHHHHHhCCCCc
Q 019543 156 AGHSDVMAGVLAVKGERLAKELYF----LQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLASHPRV 227 (339)
Q Consensus 156 ~g~~~~~gG~v~~~~~~l~~~l~~----~~~~~~~~~~~~~a~~~~~~l----~~~~~r~~~~~~~a~~l~~~L~~~~~i 227 (339)
|.+| .|+++.+++.....+.. ......+..+....+.+..++ +.++...++..++.+++.+.|++++ +
T Consensus 203 gp~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~ 278 (381)
T PRK02948 203 GPKG---VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLP-L 278 (381)
T ss_pred CCCc---EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-C
Confidence 7544 46666665311111110 000111223332222222222 3445666777788888989898774 2
Q ss_pred eEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccc-eeccccccCCCCCHHHHHh
Q 019543 228 KKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSL-ISMPCFMSHASIPVEVRQA 306 (339)
Q Consensus 228 ~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~-~~~p~~~~h~~~~~~~~~~ 306 (339)
.... .+ ..+ .-...+++|.+.+.. ..++...|...||.++.|...+. +..|. .....
T Consensus 279 ~v~~-~~-~~~----------~~~~~i~~~~~~~~~-~~~~~~~l~~~gI~v~~g~~c~~~~~~p~---------~~~~~ 336 (381)
T PRK02948 279 PIEV-EG-HST----------SCLPHIIGVTIKGIE-GQYTMLECNRRGIAISTGSACQVGKQEPS---------KTMLA 336 (381)
T ss_pred CEEE-eC-CCc----------cCcCCEEEEEeCCCC-HHHHHHhcccCCEEEEchHhcCCCCCCCC---------HHHHH
Confidence 2111 11 000 012457777765422 34566678788999987653211 11121 11223
Q ss_pred CCC----CCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 307 RGL----TEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 307 ~g~----~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+|. .++.||||++..++++.++.+.++|++
T Consensus 337 ~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~ 370 (381)
T PRK02948 337 IGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALET 370 (381)
T ss_pred cCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 332 247899999999998888888888864
No 145
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.72 E-value=3.2e-16 Score=149.03 Aligned_cols=207 Identities=12% Similarity=0.102 Sum_probs=133.7
Q ss_pred CchHHHHHHHHHhHhCCC-eEEEcCcH-HHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 54 NPTRDALESLLAKLDKAD-RALCFTSG-MAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~-~~l~~~sG-~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.+...+|++.+|++++.+ +.+++++| ++++..++ .++++||+|+++++.|........
T Consensus 66 ~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 145 (367)
T PRK02731 66 DGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAKDYGHDLD 145 (367)
T ss_pred CCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecccCCCCCHH
Confidence 344578999999999864 34555555 66676544 478999999999998865432211
Q ss_pred ----------------------------HHHHHHHHHc--CCEEEEeCCcCCCCCcC----cc---cC-CCeEEEecccc
Q 019543 112 ----------------------------RKIAEMAHAH--GALLLVDNSIMSPVLSR----PL---EL-GADIVMHSATK 153 (339)
Q Consensus 112 ----------------------------~~I~~la~~~--g~~livD~a~a~g~~~~----~~---~~-~~Di~~~S~sK 153 (339)
++|.++++.+ |+++|+|++|....... .+ .. .-.++++|+||
T Consensus 146 ~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 225 (367)
T PRK02731 146 AMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSK 225 (367)
T ss_pred HHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehH
Confidence 7788888775 99999999986443211 11 11 22488899999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceEE
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKV 230 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~v 230 (339)
.++.+| ...||+++++ ++.+.+...... ...+......+...++. ++...+..+++.+.+.+.|+.. ++..
T Consensus 226 ~~g~~G-~RiG~l~~~~-~~~~~l~~~~~~--~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~- 299 (367)
T PRK02731 226 AYGLAG-LRVGYGIAPP-EIIDALNRVRQP--FNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEY- 299 (367)
T ss_pred hhcCcc-cceeeeeCCH-HHHHHHHHccCC--CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCcc-
Confidence 998655 4567888764 677777655432 23344444444443332 3444445566677788888776 3321
Q ss_pred ecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCC
Q 019543 231 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGS 283 (339)
Q Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~ 283 (339)
+| +.++++++.+++...+.+|++.|.+.|+.++.|.
T Consensus 300 -~~----------------~~g~~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~ 335 (367)
T PRK02731 300 -IP----------------SVGNFILVDFDDGKDAAEAYQALLKRGVIVRPVA 335 (367)
T ss_pred -CC----------------CCceEEEEECCCCCCHHHHHHHHHHCCEEEEeCC
Confidence 12 1467889988544456678888877888877543
No 146
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.72 E-value=7.2e-16 Score=148.49 Aligned_cols=237 Identities=17% Similarity=0.182 Sum_probs=157.3
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhc----------CCC-CEEEEcCCCccchH--------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL----------GTG-EEIVAGDDLYGGTD-------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll----------~~G-D~Vi~~~~~y~~~~-------------- 107 (339)
.++.+.+||++|+++.+.+.+++++||++|+.+++.++ ++| ++|++.+..|+|..
T Consensus 81 ~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~ 160 (401)
T PRK00854 81 RNDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARG 160 (401)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccc
Confidence 45778899999999999999999999999998554422 123 67887776666531
Q ss_pred -----------------HHHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcC--
Q 019543 108 -----------------RLLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSR-- 138 (339)
Q Consensus 108 -----------------~~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~-- 138 (339)
..++ ++|.++|++||+++|+||+|+ .|..+.
T Consensus 161 ~~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~ 240 (401)
T PRK00854 161 GFGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLL 240 (401)
T ss_pred cCCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHh
Confidence 0000 889999999999999999996 332221
Q ss_pred ---cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHHH--HHHHHHHH
Q 019543 139 ---PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDN 213 (339)
Q Consensus 139 ---~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~ 213 (339)
......|+++. +|++++.. ..+|++++++ ++.+.++..........+|..++++...|+.++. ..++.+++
T Consensus 241 ~~~~~g~~~D~~~~--~K~l~gg~-~~ig~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~ 316 (401)
T PRK00854 241 AEEHEGIEADVTLI--GKALSGGF-YPVSAVLSNS-EVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEM 316 (401)
T ss_pred HHhhcCCCCCEEEe--cccccCCc-cCeEEEEEcH-HHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 11234588775 69998643 3467888775 5666554322222334578888878877877654 56667777
Q ss_pred HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee-CCHHHHHHHHccCCcceeecccCCcccceeccc
Q 019543 214 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPC 292 (339)
Q Consensus 214 a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~-~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~ 292 (339)
.+++.+.|+.+... .+.. .++.|.++.|.+ ++.....+|++.|...|+.++ +
T Consensus 317 ~~~l~~~L~~~~~~-~~~~---------------~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~----------~- 369 (401)
T PRK00854 317 GAYFLEGLRSIRSN-IVRE---------------VRGRGLMLAVELEPEAGGARQYCEALKERGLLAK----------D- 369 (401)
T ss_pred HHHHHHHHHhhccC-ceEE---------------EeccceEEEEEEecCchhHHHHHHHHHHCCeEEe----------c-
Confidence 88888888765321 0100 134678888876 443446778888877676543 1
Q ss_pred cccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 293 FMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 293 ~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
...+.||+++.+..+++.|+.+.++|++
T Consensus 370 ----------------~~~~~lR~~p~~~~t~e~i~~~i~~l~~ 397 (401)
T PRK00854 370 ----------------THDHTIRLAPPLVITREQVDWALEQIAK 397 (401)
T ss_pred ----------------CCCCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 0236899998777766666666666653
No 147
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.72 E-value=2.9e-15 Score=144.40 Aligned_cols=225 Identities=16% Similarity=0.078 Sum_probs=143.2
Q ss_pred chHHHHHHHHHhHhCC--------CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 55 PTRDALESLLAKLDKA--------DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~--------~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
....++++.++++++. +++++++++++|+..++ .+.++||+|+++++.|........
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~ 152 (403)
T TIGR01265 73 VGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPE 152 (403)
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcc
Confidence 4456788888888763 46778888899998654 477999999999998875432221
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-c---c-cCC---C
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-P---L-ELG---A 144 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-~---~-~~~---~ 144 (339)
++|+++|+++|+++|+|++|+...+.. + + ... -
T Consensus 153 ~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 232 (403)
T TIGR01265 153 KDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVP 232 (403)
T ss_pred cCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCc
Confidence 889999999999999999997543221 1 1 111 1
Q ss_pred eEEEeccccccccCCCceEEEEEEcC-hh-----HHHHHHHHHHhcCCCCChHHHHHHHhchh-----hHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKG-ER-----LAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDN 213 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~-~~-----l~~~l~~~~~~~~~~~~~~~a~~~~~~l~-----~~~~r~~~~~~~ 213 (339)
-|+++||||.++.+|.+ .||+++++ +. +.+.+..... .....+.+....+...++ .+...+++..++
T Consensus 233 vi~~~S~SK~~~~pGlR-iG~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 310 (403)
T TIGR01265 233 VLSLGGISKRWVVPGWR-LGWIIIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENTPQEFFDGKISVLKSN 310 (403)
T ss_pred EEEEeecccccCCCcce-EEEEEEeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 37889999999887754 56766642 22 2223333222 123344444443333332 245556667778
Q ss_pred HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-----HHHHHHHccC-CcceeecccCCcccc
Q 019543 214 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVVETT-KYFSITVSFGSVKSL 287 (339)
Q Consensus 214 a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-----~~~~~~~~~L-~~~~i~v~~G~~~s~ 287 (339)
.+.+.+.|+.++++. +..|. .|..+++.+... ....++++.+ +..|+.+..|..+.
T Consensus 311 ~~~l~~~L~~~~~~~-~~~p~----------------~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~- 372 (403)
T TIGR01265 311 AELCYEELKDIPGLV-CPKPE----------------GAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFG- 372 (403)
T ss_pred HHHHHHHHhcCCCce-ecCCC----------------ceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccC-
Confidence 888999998876653 22231 456777776422 1345676664 56788877664321
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEeccC
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE 321 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e 321 (339)
.++.+|||++.+
T Consensus 373 ----------------------~~~~iRis~~~~ 384 (403)
T TIGR01265 373 ----------------------LPNWVRITITVP 384 (403)
T ss_pred ----------------------CCCeEEEEecCC
Confidence 136799999964
No 148
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.72 E-value=1.2e-15 Score=147.03 Aligned_cols=252 Identities=16% Similarity=0.108 Sum_probs=150.9
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-Hh----cCCCCEEEEcCCCccchHHHH---H-------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HL----LGTGEEIVAGDDLYGGTDRLL---S------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~l----l~~GD~Vi~~~~~y~~~~~~~---~------------- 111 (339)
+..+++++.+++++|++ .+++++||+.++..++ .+ .++||+|++++..|+.....+ .
T Consensus 47 ~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~ 126 (402)
T TIGR02006 47 EAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS 126 (402)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC
Confidence 46788999999999975 5666667788887543 22 368999999988776543211 1
Q ss_pred -----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEecccccc
Q 019543 112 -----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 155 (339)
Q Consensus 112 -----------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l 155 (339)
++|.++|+++|+++++|++|+.|... +....++|++++|++|.+
T Consensus 127 ~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~ 206 (402)
T TIGR02006 127 NGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIY 206 (402)
T ss_pred CCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhc
Confidence 99999999999999999999988653 333568999999999987
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHHH-------HhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHHHhCC
Q 019543 156 AGHSDVMAGVLAVKGERLAKELYFLQ-------NAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 156 ~g~~~~~gG~v~~~~~~l~~~l~~~~-------~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
|++| .|+++.+++.. ..+.... +....+.+......+..+++ .++.+.++.++.++++.+.|+.+
T Consensus 207 gp~G---~G~l~~~~~~~-~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 282 (402)
T TIGR02006 207 GPKG---IGALYVRRKPR-VRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSI 282 (402)
T ss_pred CCCc---eEEEEEccCCC-CCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 6433 34555554222 2221110 11112222222111112222 23444556667788888888888
Q ss_pred CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccc-eeccccccCCCCCHHH
Q 019543 225 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSL-ISMPCFMSHASIPVEV 303 (339)
Q Consensus 225 ~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~-~~~p~~~~h~~~~~~~ 303 (339)
+++.... +. +. . .....+++|...+. ..+...|+ ++.++.|...+. ...| ...
T Consensus 283 ~~v~~~~-~~-~~-~---------~p~~~~v~f~~~~~---~~~~~~l~--~i~v~~G~~c~~~~~~~---------~~~ 336 (402)
T TIGR02006 283 EEVYLNG-DL-EH-R---------VPGNLNVSFNYVEG---ESLIMALK--DLAVSSGSACTSASLEP---------SYV 336 (402)
T ss_pred CCEEEeC-Cc-cc-c---------CCCeEEEEEeCcCH---HHHHHhcC--CEEEechhhcCCCCCCc---------cHH
Confidence 8764322 11 00 0 00112455652222 23444554 666666642111 0111 112
Q ss_pred HHhCCCC----CCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 304 RQARGLT----EDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 304 ~~~~g~~----~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
...+|+. .+.||+|++..++++.|+.+.++|++
T Consensus 337 l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~ 373 (402)
T TIGR02006 337 LRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKS 373 (402)
T ss_pred HHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 3455654 47899999999888888888888764
No 149
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.72 E-value=1.3e-15 Score=144.36 Aligned_cols=231 Identities=17% Similarity=0.169 Sum_probs=154.4
Q ss_pred hHHHHHHHHHhHhC--------CCeEEEcCcHHHH-HHHHHH-h-cCCCCEEEEcCCCccchHHHHH-------------
Q 019543 56 TRDALESLLAKLDK--------ADRALCFTSGMAA-LAAVTH-L-LGTGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g--------~~~~l~~~sG~~A-~~~il~-l-l~~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
....|++.++++++ .+..+++++|+.+ +..+.. + .++||.|++++|.|+.....++
T Consensus 45 g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~ 124 (363)
T PF00155_consen 45 GYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDS 124 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEE
T ss_pred hhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccccccccceecCCccccccccccccCceeeeccccc
Confidence 47899999999988 4546777777655 445554 5 6799999999999987765443
Q ss_pred ----------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc-----c
Q 019543 112 ----------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP-----L 140 (339)
Q Consensus 112 ----------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~-----~ 140 (339)
++|+++|++||++||+|++|+....... .
T Consensus 125 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 204 (363)
T PF00155_consen 125 ENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIR 204 (363)
T ss_dssp TTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHH
T ss_pred cccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCccc
Confidence 7777889999999999999987655421 1
Q ss_pred ---cCCC-eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch-------hhHHHHHHH
Q 019543 141 ---ELGA-DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-------KTMALRVEK 209 (339)
Q Consensus 141 ---~~~~-Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l-------~~~~~r~~~ 209 (339)
..+. .+++.|+||.+|.+|. +.|+++++ +.+.+.++.+...... +......+...+ +.+.+++++
T Consensus 205 ~~~~~~~~vi~~~S~SK~~g~~Gl-RvG~i~~~-~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 280 (363)
T PF00155_consen 205 SLLDEDDNVIVVGSLSKSFGLPGL-RVGYIVAP-PELIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRER 280 (363)
T ss_dssp GHHTTTSTEEEEEESTTTTTSGGG-TEEEEEEE-HHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccceeeeecccccccccc-ccccccch-hhhhhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhh
Confidence 1222 4899999999987664 45788775 5788888877654433 433333222222 145667777
Q ss_pred HHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcc-eeecccCCcccce
Q 019543 210 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLI 288 (339)
Q Consensus 210 ~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~-~i~v~~G~~~s~~ 288 (339)
+.++.+++.+.|++. ++.... | .++++.+...+..+..+|.+.|.+. |+.+..|..+.
T Consensus 281 l~~~~~~l~~~L~~~-~~~~~~-~-----------------~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~-- 339 (363)
T PF00155_consen 281 LRENRDLLREALEEI-GITVLP-P-----------------EAGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFG-- 339 (363)
T ss_dssp HHHHHHHHHHHHHHT-TSEEEH-H-----------------SBSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGT--
T ss_pred HHHHHHHHHHHHHHh-hhheee-c-----------------cCccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCC--
Confidence 888899999999876 443221 1 2455555433333566788887665 88776554211
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHH
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKA 333 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~a 333 (339)
. ++.+|+++ ....++.++.+.++
T Consensus 340 --------------------~-~~~iRi~~-a~~~~e~~~~~~~~ 362 (363)
T PF00155_consen 340 --------------------V-PGYIRISL-ASHSEEDLEEALER 362 (363)
T ss_dssp --------------------S-TTEEEEEG-GCSCHHHHHHHHHH
T ss_pred --------------------C-CCEEEEEe-ccCCHHHHHHHHhh
Confidence 2 46899999 55555544554444
No 150
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=7.7e-18 Score=156.10 Aligned_cols=241 Identities=20% Similarity=0.209 Sum_probs=174.3
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccc----------h------------HHH
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGG----------T------------DRL 109 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~----------~------------~~~ 109 (339)
....++++|+..|++.|.+++++|+.|+++|.+. -.++.||..|+.+...... + .++
T Consensus 180 ~~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHNdm~~LEr~ 259 (519)
T KOG1357|consen 180 TTEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHNDMQGLERL 259 (519)
T ss_pred cHHHHHHHHHHHHHhcCCcceEEEeccccccccCcceeecCCcceeeccccchheeccccccCceEEEEecCCHHHHHHH
Confidence 4467899999999999999999999999999864 4599999998876542211 0 012
Q ss_pred HH----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c-------ccCCCe
Q 019543 110 LS----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P-------LELGAD 145 (339)
Q Consensus 110 ~~----------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~-------~~~~~D 145 (339)
++ +++++++|||.++++.||+|+.|..+. . -+..+|
T Consensus 260 Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvD 339 (519)
T KOG1357|consen 260 LRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVD 339 (519)
T ss_pred HHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhhe
Confidence 22 999999999999999999998776532 1 123468
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhhH---------HHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKTM---------ALRVEKQQDNA 214 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~~---------~~r~~~~~~~a 214 (339)
|.+++|+|+++. .||++.+++ ++++.++.... .+++.+||..+...+..++.+ .++.+++.+|.
T Consensus 340 ImMGtftKSfga----~GGyiagsk-~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns 414 (519)
T KOG1357|consen 340 IMMGTFTKSFGA----AGGYIAGSK-ELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENS 414 (519)
T ss_pred eecceehhhccc----ccceecCcH-HHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhh
Confidence 999999999983 478888775 68887775432 456778887777666665543 57788888999
Q ss_pred HHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccc
Q 019543 215 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 215 ~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~ 294 (339)
.+++..|+....+ .| + ...++++++.+-...+...|.+.+....+++-.++ .|++.
T Consensus 415 ~yfr~~l~~~gfi---vy-G--------------~~dSpVvplll~~~~k~~~f~r~~l~~nigvVvvg------fPatp 470 (519)
T KOG1357|consen 415 RYFRWELQKMGFI---VY-G--------------NNDSPVVPLLLYGPAKIVAFSREMLERNIGVVVVG------FPATP 470 (519)
T ss_pred HHHHHhhhcCcEE---Ee-c--------------CCCCCcceeeecCcccccHHHHHHHhcCceEEEEe------CCCch
Confidence 9888888776432 22 1 12578999987555566677777766666655333 45431
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+..+++|+++...|+.+.++.+.++.+.
T Consensus 471 --------------l~e~r~R~c~Sa~ht~e~ld~~l~~i~~ 498 (519)
T KOG1357|consen 471 --------------LLESRARFCLSASHTKEDLDRALEVIDR 498 (519)
T ss_pred --------------HHHhHHHhhhcccccHHHHHHHHHHHhh
Confidence 2457789999999988877777776654
No 151
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.72 E-value=1.2e-15 Score=145.03 Aligned_cols=239 Identities=18% Similarity=0.100 Sum_probs=147.3
Q ss_pred chHHHHHHHHHhHhCCC----eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchH--HHHH----------------
Q 019543 55 PTRDALESLLAKLDKAD----RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTD--RLLS---------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~----~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~--~~~~---------------- 111 (339)
...+++++.+++++|++ .+++++||+.|+..++ +++.+||.+++..+.+.+.. .+.+
T Consensus 35 ~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~~ 114 (363)
T TIGR02326 35 IVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGEVEP 114 (363)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCC
Confidence 35788899999999985 2556788899998654 57788888766555443321 1111
Q ss_pred ----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccc
Q 019543 112 ----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 156 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~ 156 (339)
++|.++|++||+++++|++|+.|... +...+++|++++|++|+++
T Consensus 115 ~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~ 194 (363)
T TIGR02326 115 PDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQ 194 (363)
T ss_pred CCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCccccc
Confidence 89999999999999999999887542 3335678999999999997
Q ss_pred cCCCceEEEEEEcChhHHHHHHHH------------HHh------cCCCCChHHHHHHHhchhh------HHHHHHHHHH
Q 019543 157 GHSDVMAGVLAVKGERLAKELYFL------------QNA------EGSGLAPFDCWICLRGVKT------MALRVEKQQD 212 (339)
Q Consensus 157 g~~~~~gG~v~~~~~~l~~~l~~~------------~~~------~~~~~~~~~a~~~~~~l~~------~~~r~~~~~~ 212 (339)
|+.+ .|+++.++ +..+++... ... +....+......+..+++. ++.+.++..+
T Consensus 195 ~p~G--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~ 271 (363)
T TIGR02326 195 GVPG--FGFVIARQ-AELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQ 271 (363)
T ss_pred cCCc--ceEEEECH-HHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 6643 37888875 444443210 000 0012222222222222222 3456677778
Q ss_pred HHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCCH--HHHHHHHccCCcceeecccCCccccee
Q 019543 213 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLIS 289 (339)
Q Consensus 213 ~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~--~~~~~~~~~L~~~~i~v~~G~~~s~~~ 289 (339)
+++++.+.|+++ ++..+..+. ..++ +.+|.+.+. ....++.+.|++.|+.++.|..
T Consensus 272 ~~~~l~~~L~~~-g~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~----- 330 (363)
T TIGR02326 272 NQKTLVAGMRAL-GFEPLLDDE---------------IQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKV----- 330 (363)
T ss_pred HHHHHHHHHHHc-CCeeccCcc---------------cCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcC-----
Confidence 888899998876 333221110 0233 456766431 2345677778777887765431
Q ss_pred ccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 290 MPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 290 ~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+ ....+|||+...+..+.++.+.++|++
T Consensus 331 -~------------------~~~~iRi~~~~~~~~edv~~~l~~l~~ 358 (363)
T TIGR02326 331 -S------------------QVDCFRIGNIGEVDAADITRLLTAIGK 358 (363)
T ss_pred -C------------------CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 0 135799997444445555556555543
No 152
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.72 E-value=1.9e-15 Score=145.65 Aligned_cols=171 Identities=16% Similarity=0.142 Sum_probs=116.4
Q ss_pred chHHHHHHHHHhHhCC----CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH------------------
Q 019543 55 PTRDALESLLAKLDKA----DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~----~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
++++++.+.+++.+|. +++++++++++|+..++ .++++||+|+++++.|.+....+.
T Consensus 74 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~ 153 (402)
T PRK06107 74 ALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFK 153 (402)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCC
Confidence 5667777877777664 34566666689988544 578999999999987654322111
Q ss_pred -----------------------------------HHHHHHHHHc-CCEEEEeCCcCCCCCcC-c---c-cC-----CCe
Q 019543 112 -----------------------------------RKIAEMAHAH-GALLLVDNSIMSPVLSR-P---L-EL-----GAD 145 (339)
Q Consensus 112 -----------------------------------~~I~~la~~~-g~~livD~a~a~g~~~~-~---~-~~-----~~D 145 (339)
++|+++|++| |+++|+|++|+...+.. + + .. .--
T Consensus 154 ~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~v 233 (402)
T PRK06107 154 LTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRV 233 (402)
T ss_pred CCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCE
Confidence 7889999998 99999999996432211 1 1 11 124
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~L 221 (339)
++++||||.++.+| .+.||++++ +++++.+.......+...+....+++...|+ .+....++..++.+.+.+.|
T Consensus 234 i~~~S~SK~~~~pG-lRiG~~~~~-~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L 311 (402)
T PRK06107 234 LVTNGVSKTYAMTG-WRIGYAAGP-ADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALL 311 (402)
T ss_pred EEEeccchhhcCcc-cceeeeecC-HHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999998666 456788776 4688888877665555566655554444442 23445556677788888999
Q ss_pred hCCCCc
Q 019543 222 ASHPRV 227 (339)
Q Consensus 222 ~~~~~i 227 (339)
+.++++
T Consensus 312 ~~~~g~ 317 (402)
T PRK06107 312 NAIPGL 317 (402)
T ss_pred hcCCCC
Confidence 887664
No 153
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.72 E-value=1.7e-15 Score=145.25 Aligned_cols=208 Identities=13% Similarity=0.037 Sum_probs=129.3
Q ss_pred HHHHHHHHHhHh----C----CC-eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 57 RDALESLLAKLD----K----AD-RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~----g----~~-~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
..+|++.+|+++ | .+ .+++++++.+|+..++ .+++|||+|++++|.|......++
T Consensus 70 ~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 149 (388)
T PRK07366 70 TLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAEN 149 (388)
T ss_pred CHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCcc
Confidence 345666666654 4 23 3555566688988655 478999999999998876543322
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-----cc-cC--C--
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-----PL-EL--G-- 143 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-----~~-~~--~-- 143 (339)
++|+++|++||++||+||+|+...+.. .+ .. .
T Consensus 150 ~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 229 (388)
T PRK07366 150 DFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKS 229 (388)
T ss_pred CCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcc
Confidence 889999999999999999996443211 11 11 1
Q ss_pred CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCCh-HH-HH-HHHhc-hhhHHHHHHHHHHHHHHHHH
Q 019543 144 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP-FD-CW-ICLRG-VKTMALRVEKQQDNAQKIAE 219 (339)
Q Consensus 144 ~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~-~~-a~-~~~~~-l~~~~~r~~~~~~~a~~l~~ 219 (339)
.-|+++||||.+|.+|. +.||++++ +++++.+.......+...+. .. ++ .++.. -+.++..++..+++.+.+.+
T Consensus 230 ~vi~~~SfSK~~g~~Gl-RiG~~v~~-~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~ 307 (388)
T PRK07366 230 VSIEFFTLSKSYNMGGF-RIGFAIGN-AQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFIN 307 (388)
T ss_pred cEEEEeecccccCCcch-hheehcCC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 23788999999987774 56788776 47888887776554433322 22 21 11111 12234445556677777888
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccC-CcceeecccCCc
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETT-KYFSITVSFGSV 284 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L-~~~~i~v~~G~~ 284 (339)
.|+.+ ++. +..| +.|..+++.+.+. ....+|++.+ +..|+.+..|..
T Consensus 308 ~L~~~-~~~-~~~p----------------~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~ 357 (388)
T PRK07366 308 ALHQI-GWP-VPLP----------------EATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSG 357 (388)
T ss_pred HHHHC-CCc-ccCC----------------CeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchH
Confidence 88876 332 1122 1456677777532 1235666655 566888776643
No 154
>PRK07683 aminotransferase A; Validated
Probab=99.72 E-value=1.8e-15 Score=145.17 Aligned_cols=224 Identities=16% Similarity=0.182 Sum_probs=139.6
Q ss_pred chHHHHHHHHHhHh----C----CC-eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------
Q 019543 55 PTRDALESLLAKLD----K----AD-RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~----g----~~-~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
+...+|++.+++++ | .+ +.++++++++|+.+++ .++++||+|+++++.|.+....+.
T Consensus 65 ~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 144 (387)
T PRK07683 65 AGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS 144 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc
Confidence 34567777887776 3 23 5677777799998655 478999999999998876543222
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---cc-cC----CC
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---PL-EL----GA 144 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~~-~~----~~ 144 (339)
++|+++|+++|+++|+|++|+...+.. ++ .. +-
T Consensus 145 ~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 224 (387)
T PRK07683 145 TGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREK 224 (387)
T ss_pred ccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCC
Confidence 889999999999999999997554321 11 11 23
Q ss_pred eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEF 220 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~ 220 (339)
.|++.||||.++.+| .+.||+++++ ++++.+.........+.+.....++...|+ .++..+++..++.+.+.+.
T Consensus 225 vi~~~s~SK~~~~pG-lRiG~i~~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (387)
T PRK07683 225 TIVINGLSKSHSMTG-WRIGFLFAPS-YLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNR 302 (387)
T ss_pred eEEEeeccccccCcc-ceeEEEEcCH-HHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 588999999999766 4567887764 677777765443333344443333333332 2333344556677777788
Q ss_pred HhCCCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCC-HHHHHHHHcc-CCcceeecccCCcccceeccccccCC
Q 019543 221 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGS-LALSKHVVET-TKYFSITVSFGSVKSLISMPCFMSHA 297 (339)
Q Consensus 221 L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~-~~~~~~~~~~-L~~~~i~v~~G~~~s~~~~p~~~~h~ 297 (339)
|+.. ++. +..| .++ .++..+.+ .....+|+.. ++..|+.+..|..+. +
T Consensus 303 l~~~-~~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~----~------ 353 (387)
T PRK07683 303 LISM-GLD-VEKP-----------------TGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFS----E------ 353 (387)
T ss_pred HHHc-CCc-ccCC-----------------CeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhC----C------
Confidence 8764 222 1111 234 34444432 1123455544 466788877664321 1
Q ss_pred CCCHHHHHhCCCCCCeEEEEecc
Q 019543 298 SIPVEVRQARGLTEDLVRISVGI 320 (339)
Q Consensus 298 ~~~~~~~~~~g~~~~~lRisvg~ 320 (339)
..++.+||+++.
T Consensus 354 -----------~~~~~~Ri~~~~ 365 (387)
T PRK07683 354 -----------YGEGYVRLSYAY 365 (387)
T ss_pred -----------CCCCeEEEEecC
Confidence 134789999996
No 155
>PLN02656 tyrosine transaminase
Probab=99.72 E-value=3.2e-15 Score=144.36 Aligned_cols=169 Identities=12% Similarity=0.073 Sum_probs=111.5
Q ss_pred hHHHHHHHHHhHhC--------CCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 56 TRDALESLLAKLDK--------ADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g--------~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
...+|++.++++++ .+++++++++++|+..+ ..+++|||+|+++++.|........
T Consensus 74 G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~ 153 (409)
T PLN02656 74 GLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEK 153 (409)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcC
Confidence 34567777777653 35677888889998754 4578999999999998875432111
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc-cC---CCe
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL-EL---GAD 145 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~-~~---~~D 145 (339)
++|+++|++||++||+|++|+...+.. ++ .. ..-
T Consensus 154 ~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 233 (409)
T PLN02656 154 GWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPV 233 (409)
T ss_pred CCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcE
Confidence 889999999999999999997443211 11 11 124
Q ss_pred EEEeccccccccCCCceEEEEEEcC-------hhHHHHHHHHHHhcCCCCChHHHHHHHhchh-----hHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKG-------ERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDN 213 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~-------~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~-----~~~~r~~~~~~~ 213 (339)
|++.||||.++.+|. +.||+++++ +++++.+....... ...+.....++...|+ .+...+++.+++
T Consensus 234 i~~~SfSK~f~~pGl-RiG~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 311 (409)
T PLN02656 234 LTLGSLSKRWIVPGW-RLGWFVTTDPSGSFRDPKIVERIKKYFDIL-GGPATFIQAAVPTILEQTDESFFKKTINILKQS 311 (409)
T ss_pred EEEcccchhccCcce-eEEEEEEeCcccccccHHHHHHHHHHHhhh-cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 888999999988775 566777642 35667776654433 2334444444333332 244455566677
Q ss_pred HHHHHHHHhCCCC
Q 019543 214 AQKIAEFLASHPR 226 (339)
Q Consensus 214 a~~l~~~L~~~~~ 226 (339)
.+.+.+.|+.+++
T Consensus 312 r~~~~~~L~~~~~ 324 (409)
T PLN02656 312 SDICCDRIKEIPC 324 (409)
T ss_pred HHHHHHHHhhCCC
Confidence 7888888887654
No 156
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.72 E-value=8.3e-16 Score=146.53 Aligned_cols=244 Identities=24% Similarity=0.250 Sum_probs=158.7
Q ss_pred CchHHHHHHHHHhHhCCCe---EEEcCcHHHHHHHHH-Hh---cCCCCEEEEcCCCccchHHHHH---------------
Q 019543 54 NPTRDALESLLAKLDKADR---ALCFTSGMAALAAVT-HL---LGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~---~l~~~sG~~A~~~il-~l---l~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
....++.++.+++++|++. .++++|++.|+..++ .+ +++||+|++.+..|++....+.
T Consensus 42 ~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~ 121 (371)
T PF00266_consen 42 AEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPA 121 (371)
T ss_dssp HHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred hHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhccccc
Confidence 4567899999999999765 556777788887644 45 7999999999888877652222
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEecccc
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATK 153 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK 153 (339)
++|.++||++|+++++|.+|+.|.. .+...+++|++++|.+|
T Consensus 122 ~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~K 201 (371)
T PF00266_consen 122 DPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHK 201 (371)
T ss_dssp GTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTS
T ss_pred cccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhhccCCceeEechhccccccccccccccceeeecccc
Confidence 9999999999999999999998865 34445789999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHH-----------Hh---------c-CCCCChHHHHHHHhchhh-----HHHHH
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQ-----------NA---------E-GSGLAPFDCWICLRGVKT-----MALRV 207 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~-----------~~---------~-~~~~~~~~a~~~~~~l~~-----~~~r~ 207 (339)
++|+.+ .|+++.++ +..++++... .. + +.+.+....+.+..+++. ++...
T Consensus 202 -l~gp~G--~g~l~v~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~ 277 (371)
T PF00266_consen 202 -LGGPPG--LGFLYVRP-EAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIR 277 (371)
T ss_dssp -TTSSST--EEEEEEEH-HHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCCCc--hhhheehh-hhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccch
Confidence 777654 47888876 5666663110 00 1 112222222222222332 23335
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccc
Q 019543 208 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSL 287 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~ 287 (339)
++..+.++++.+.|++.+++.. ..|.. . ...+++++|.+.+.+ ...+.+.|...+|.++.|...+
T Consensus 278 ~~~~~l~~~~~~~l~~~~~~~~-~~~~~---~---------~~~~~i~~~~~~~~~-~~~~~~~L~~~~I~~~~G~~~~- 342 (371)
T PF00266_consen 278 ERIRELAEYLREALEELPGIEV-LGPDD---E---------PRRPSIVSFNLPGSD-ADDVVKYLEERGIAVSTGSACA- 342 (371)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEE-SSSSC---G---------GBGTTEEEEEETTSS-HHHHHHHHHHHTEEEEESTTTC-
T ss_pred hhhhhHHHHHHhhhhcCCceeE-eeecc---c---------ccccceEEEeecCCC-HHHHHHHHhhcCEEEeccCccc-
Confidence 5566778889999999888653 22311 1 125789999885432 3566666766688888764322
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHH
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDL 330 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l 330 (339)
.|. ....+ ..+.||+|++..++++.|+.|
T Consensus 343 --~~~-----------~~~~~-~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 343 --GPS-----------LDILG-MGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp --HHH-----------HHHHH-TTTEEEEE-GTTSSHHHHHHH
T ss_pred --HHH-----------HHHhC-CCCEEEEeccCCCCHHHHhhC
Confidence 110 01111 127899999999999877765
No 157
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.71 E-value=9.4e-16 Score=147.34 Aligned_cols=239 Identities=18% Similarity=0.091 Sum_probs=151.9
Q ss_pred CCchHHHHHHHHHhHhCCC--eEEEcCcHH-HHHHHHH-HhcCC--CCEEEEcCCCccchHHHHH---------------
Q 019543 53 GNPTRDALESLLAKLDKAD--RALCFTSGM-AALAAVT-HLLGT--GEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~--~~l~~~sG~-~A~~~il-~ll~~--GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
..+.++++++++++++|.+ .++++++|+ +++.+++ .++.+ ||+|+++++.|+.+...+.
T Consensus 62 ~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~ 141 (398)
T cd00613 62 RLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPS 141 (398)
T ss_pred HHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEecc
Confidence 3467789999999999976 677777665 4444443 35665 9999998887765432211
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEecccc
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATK 153 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK 153 (339)
++|+++|++||+++|+|++|+.+.. .++...++|++++|++|
T Consensus 142 ~~~~~~d~~~l~~~i~~~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K 221 (398)
T cd00613 142 DEGGTVDLEALKEEVSEEVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQK 221 (398)
T ss_pred CCCCCcCHHHHHHhcCCCeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccc
Confidence 8999999999999999999876542 33345678999999999
Q ss_pred ccccC---CCceEEEEEEcChhHHHHHHHH-------------------------HHhcC----CCCChHH---HHHHHh
Q 019543 154 FIAGH---SDVMAGVLAVKGERLAKELYFL-------------------------QNAEG----SGLAPFD---CWICLR 198 (339)
Q Consensus 154 ~l~g~---~~~~gG~v~~~~~~l~~~l~~~-------------------------~~~~~----~~~~~~~---a~~~~~ 198 (339)
++ ++ |+..+|+++.++ ++.+.+... ++..+ ...++.. ++..+.
T Consensus 222 ~~-~p~g~Ggp~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~ 299 (398)
T cd00613 222 TG-VPHGGGGPGAGFFAVKK-ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIV 299 (398)
T ss_pred cC-CCCCCCCCceeEEEEhh-hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHH
Confidence 98 33 234578888765 455543100 00001 0011111 111122
Q ss_pred ch--hhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--HHHHHHHHccCCc
Q 019543 199 GV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKY 274 (339)
Q Consensus 199 ~l--~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--~~~~~~~~~~L~~ 274 (339)
.+ +.+++..++..++++++.+.|++++... .+. ....++++|.+.. ...+.++++.|..
T Consensus 300 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~---~~~--------------~~~~~~v~~~~~~~~~~~~~~~~~~L~~ 362 (398)
T cd00613 300 YLGPEGLKEIAERAHLNANYLAKRLKEVGGVL---PFN--------------GPFFHEFVLRLPPLYGIRAEDLAKALID 362 (398)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---cCC--------------CCeeEEEEEEcCCcchHHHHHHHHhhhh
Confidence 11 2244556677788889999998876432 111 1123456777653 2356788888877
Q ss_pred ceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 275 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 275 ~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
.++.+.. ..| ..++.||+|+...++++.|+.+.++|
T Consensus 363 ~gi~~~~-------~~~-----------------~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 363 GGFHAPT-------MYL-----------------PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred cCccccc-------ccc-----------------CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 6664321 011 13478999999999999888887764
No 158
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.71 E-value=9.1e-16 Score=149.95 Aligned_cols=244 Identities=18% Similarity=0.151 Sum_probs=143.5
Q ss_pred CCchHHHHH----HHHHhHhCCCe-E----EEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccch----------------
Q 019543 53 GNPTRDALE----SLLAKLDKADR-A----LCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGT---------------- 106 (339)
Q Consensus 53 ~~~~~~~le----~~la~~~g~~~-~----l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~---------------- 106 (339)
+....+.+| +++++++|++. . +.++||++|+.+ +.++++|||+|++++..+++.
T Consensus 74 g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~ 153 (452)
T PTZ00094 74 GNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATS 153 (452)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccce
Confidence 344556676 48899999763 2 223689999986 556899999999965432211
Q ss_pred ---------------------HHHHH--------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-----Ccc
Q 019543 107 ---------------------DRLLS--------------------RKIAEMAHAHGALLLVDNSIMSPVLS-----RPL 140 (339)
Q Consensus 107 ---------------------~~~~~--------------------~~I~~la~~~g~~livD~a~a~g~~~-----~~~ 140 (339)
...++ ++|.++|+++|+++++|++|+.|... .++
T Consensus 154 ~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~ 233 (452)
T PTZ00094 154 IYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF 233 (452)
T ss_pred eeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC
Confidence 01110 89999999999999999999998762 122
Q ss_pred cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH--hc---CCCCChHHHHHHHhchhh-----HHHHHHHH
Q 019543 141 ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AE---GSGLAPFDCWICLRGVKT-----MALRVEKQ 210 (339)
Q Consensus 141 ~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~---~~~~~~~~a~~~~~~l~~-----~~~r~~~~ 210 (339)
.++|++++|++|+|+||. ||++++++ .+.+.+....+ .+ ..+.++...+.+..+++. .+...++.
T Consensus 234 -~~~D~l~~S~hK~l~GP~---Gg~l~~~~-~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i 308 (452)
T PTZ00094 234 -PYADVVTTTTHKSLRGPR---SGLIFYRK-KVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQV 308 (452)
T ss_pred -CCCcEEEcCCccCCCCCC---ceEEEEec-ccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHH
Confidence 278999999999998763 57777765 34443332211 11 113333333323333333 34456777
Q ss_pred HHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceec
Q 019543 211 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISM 290 (339)
Q Consensus 211 ~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~ 290 (339)
.++++++.+.|++. ++..+ .++-+ ..-.+++|...+. ....+...|...||.++.-+ .+
T Consensus 309 ~~l~~~l~~~L~~~-g~~v~-~~~~~-------------~~~~~v~~~~~~~-~~~~~~~~L~~~gI~vs~~~-----~p 367 (452)
T PTZ00094 309 LKNAKALAAALEKR-GYDLV-TGGTD-------------NHLVLVDLRPFGI-TGSKMEKLLDAVNISVNKNT-----IP 367 (452)
T ss_pred HHHHHHHHHHHHhC-CcEEe-cCCCC-------------CceEeecCCcCCC-CHHHHHHHHHHCCcEEeccc-----CC
Confidence 78999999999774 54332 22100 0123344433221 23455666666788775211 01
Q ss_pred cccccCCCCCHHHHHhCCCCCCeEEEEeccCCH----HHHHHHHHHHHh
Q 019543 291 PCFMSHASIPVEVRQARGLTEDLVRISVGIEDV----NDLISDLDKALR 335 (339)
Q Consensus 291 p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~----~~li~~l~~al~ 335 (339)
+.... ..++.||+|+..-.+ ++.++.+.++|+
T Consensus 368 ~~~~~-------------~~~~~vRis~~~~tt~g~~~~di~~l~~~l~ 403 (452)
T PTZ00094 368 GDKSA-------------LNPSGVRLGTPALTTRGAKEKDFKFVADFLD 403 (452)
T ss_pred CCCcC-------------CCCCeEEECCHHHHhCCCCHHHHHHHHHHHH
Confidence 11100 134789999954333 455555555544
No 159
>PRK14012 cysteine desulfurase; Provisional
Probab=99.71 E-value=2.3e-15 Score=145.18 Aligned_cols=252 Identities=16% Similarity=0.106 Sum_probs=150.0
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-Hh----cCCCCEEEEcCCCccchHHHH---H-------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HL----LGTGEEIVAGDDLYGGTDRLL---S------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~l----l~~GD~Vi~~~~~y~~~~~~~---~------------- 111 (339)
+..+++|+.+++++|++ .+++++||++|+..++ ++ .++||+|++++..|+.....+ .
T Consensus 49 ~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~ 128 (404)
T PRK14012 49 EAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS 128 (404)
T ss_pred HHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC
Confidence 56789999999999975 4778888899987533 33 478999999988876543211 1
Q ss_pred -----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEecccccc
Q 019543 112 -----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 155 (339)
Q Consensus 112 -----------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l 155 (339)
++|.++|+++|+++++|++|+.|... +....++|++++|++|.+
T Consensus 129 ~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~ 208 (404)
T PRK14012 129 NGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIY 208 (404)
T ss_pred CCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhcc
Confidence 99999999999999999999988653 333567899999999977
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHH-H------HhcCCCCChHHHHHHHhch----hhHHHHHHHHHHHHHHHHHHHhCC
Q 019543 156 AGHSDVMAGVLAVKGERLAKELYFL-Q------NAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 156 ~g~~~~~gG~v~~~~~~l~~~l~~~-~------~~~~~~~~~~~a~~~~~~l----~~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
++. ..|+++ .+++.. .++... . +......+.......-.++ .......+++++.++++.+.|+.+
T Consensus 209 gp~--g~G~l~-~~~~~~-~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~ 284 (404)
T PRK14012 209 GPK--GIGALY-VRRKPR-VRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDI 284 (404)
T ss_pred CCC--ceEEEE-EecCCC-CCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 632 234444 444322 122110 0 0001111111111111111 123445666778888999999888
Q ss_pred CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccc-eeccccccCCCCCHHH
Q 019543 225 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSL-ISMPCFMSHASIPVEV 303 (339)
Q Consensus 225 ~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~-~~~p~~~~h~~~~~~~ 303 (339)
+++.....+ + +. ......++|.+.+. ..+...|+ +++++.|...+. ...|. ..
T Consensus 285 ~~i~~~~~~--~-~~---------~~~~~~~~~~~~~~---~~~~~~l~--~~~i~~g~~~~~~~~~~~---------~~ 338 (404)
T PRK14012 285 EEVYLNGDL--E-QR---------VPGNLNVSFNYVEG---ESLIMALK--DLAVSSGSACTSASLEPS---------YV 338 (404)
T ss_pred CCEEEeCCc--c-cc---------CCCEEEEEEeCcCH---HHHHHhCC--CeEEEchhhhCCCCCCCC---------HH
Confidence 877532111 0 00 01223566665333 24555665 455555532111 11111 11
Q ss_pred HHhCCC----CCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 304 RQARGL----TEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 304 ~~~~g~----~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
...+|+ ..+.||+|++...+++.++.+.++|++
T Consensus 339 ~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~ 375 (404)
T PRK14012 339 LRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRK 375 (404)
T ss_pred HHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 122343 357899999998888878888877764
No 160
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.71 E-value=2.5e-15 Score=141.84 Aligned_cols=240 Identities=19% Similarity=0.144 Sum_probs=151.7
Q ss_pred chHHHHHHHHHhHhCCC----eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccch-H-HHHH----------------
Q 019543 55 PTRDALESLLAKLDKAD----RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGT-D-RLLS---------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~----~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~-~-~~~~---------------- 111 (339)
+..+++++.+++++|.+ .+++++||+.++..++ .++.+||+|++..+.+.+. . ...+
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~ 110 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEYEP 110 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCCCCC
Confidence 67889999999999975 3446788899998655 5778888877655433322 1 1111
Q ss_pred ----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccc
Q 019543 112 ----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 156 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~ 156 (339)
++|.++|++||+++++|++++.|... +...+++|++++|++|+++
T Consensus 111 ~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~ 190 (355)
T TIGR03301 111 PDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLE 190 (355)
T ss_pred CCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcccc
Confidence 89999999999999999999877532 2234578999999999987
Q ss_pred cCCCceEEEEEEcChhHHHHHHHH------------HH-----hcCCCCChHHHHHH---Hhchhh---HHHHHHHHHHH
Q 019543 157 GHSDVMAGVLAVKGERLAKELYFL------------QN-----AEGSGLAPFDCWIC---LRGVKT---MALRVEKQQDN 213 (339)
Q Consensus 157 g~~~~~gG~v~~~~~~l~~~l~~~------------~~-----~~~~~~~~~~a~~~---~~~l~~---~~~r~~~~~~~ 213 (339)
|+.+ .|++++++ ++++.+... .. .+..+.+....+.+ +..+.. ++.+.++.+++
T Consensus 191 ~~~G--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~ 267 (355)
T TIGR03301 191 GVPG--FGFVIARR-DLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRN 267 (355)
T ss_pred cCCc--eeEEEECH-HHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 5533 37888875 566655410 00 01112333322222 222211 45566777788
Q ss_pred HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccCCcceeecccCCcccceecc
Q 019543 214 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMP 291 (339)
Q Consensus 214 a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L~~~~i~v~~G~~~s~~~~p 291 (339)
.+++.+.|+++ +++. ..|. . ...+.+++|.+.+. ....++.+.|+..|+.++.|.. +
T Consensus 268 ~~~~~~~L~~~-g~~~-~~~~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~------~ 326 (355)
T TIGR03301 268 RELLVDGLRAL-GFQP-LLPE--R-----------WQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKL------T 326 (355)
T ss_pred HHHHHHHHHHc-CCee-ecCC--C-----------CCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCcc------c
Confidence 89999999876 4432 2221 0 01234567776431 2345777788777877664421 0
Q ss_pred ccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 292 CFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 292 ~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+.||||+.....++.++.+.++|++
T Consensus 327 ------------------~~~~iRis~~~~~~~~~i~~~~~~l~~ 353 (355)
T TIGR03301 327 ------------------LADTFRIGTIGEIDAADIERLLEAIKD 353 (355)
T ss_pred ------------------cccEEEEecCCCCCHHHHHHHHHHHHh
Confidence 125799999665666667777777764
No 161
>PRK09148 aminotransferase; Validated
Probab=99.71 E-value=2.7e-15 Score=144.74 Aligned_cols=226 Identities=14% Similarity=0.078 Sum_probs=141.1
Q ss_pred HHHHHHHHhHh----C----CC-eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 58 DALESLLAKLD----K----AD-RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 58 ~~le~~la~~~----g----~~-~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
.+|++.+++++ | .+ ++++++++++|+..++ .++++||+|++++|.|......+.
T Consensus 71 ~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~ 150 (405)
T PRK09148 71 PGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEE 150 (405)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCC
Confidence 45555555554 4 23 4666677789998654 478999999999999876542222
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-c---c-cC----CCe
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-P---L-EL----GAD 145 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-~---~-~~----~~D 145 (339)
++|+++|++||++||+||+|+...+.. + + .. ...
T Consensus 151 ~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~ 230 (405)
T PRK09148 151 FFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVT 230 (405)
T ss_pred CccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcE
Confidence 789999999999999999997433211 1 1 11 224
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~L 221 (339)
|++.||||.++.+|. +.||++++ +++++.+...+.....+.+.....++...|+ .+...+++..++.+.+.+.|
T Consensus 231 i~~~SfSK~~~~pGl-R~G~~v~~-~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L 308 (405)
T PRK09148 231 VEFTSMSKTFSMAGW-RMGFAVGN-ERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESF 308 (405)
T ss_pred EEEeccccccCCcch-heeeeeCC-HHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 678999999997774 56788775 4788888777655444444443333333332 23444555667777888888
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH---HHHHHHHccC-CcceeecccCCcccceeccccccCC
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHA 297 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~---~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~ 297 (339)
+.++ +. +..| ..|..+++.+.+. ....+|++.+ +..|+.+..|..+. +
T Consensus 309 ~~~~-~~-~~~p----------------~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~----~------ 360 (405)
T PRK09148 309 GRAG-WD-IPPP----------------AASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFG----E------ 360 (405)
T ss_pred HHcC-Cc-cCCC----------------CeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhC----C------
Confidence 8752 21 1112 1344566666432 1235666654 46788887765421 0
Q ss_pred CCCHHHHHhCCCCCCeEEEEeccCCHHH
Q 019543 298 SIPVEVRQARGLTEDLVRISVGIEDVND 325 (339)
Q Consensus 298 ~~~~~~~~~~g~~~~~lRisvg~e~~~~ 325 (339)
-.++.+||+++ ++.+.
T Consensus 361 -----------~~~~~~Ri~~~-~~~~~ 376 (405)
T PRK09148 361 -----------HGDGYVRIALV-ENEQR 376 (405)
T ss_pred -----------CCCCeEEEEec-CCHHH
Confidence 02367999998 44444
No 162
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.71 E-value=1.8e-15 Score=143.50 Aligned_cols=234 Identities=16% Similarity=0.128 Sum_probs=149.1
Q ss_pred hHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH----------------------
Q 019543 56 TRDALESLLAKLDKA--DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS---------------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~---------------------- 111 (339)
....|++.+|++++. +++++++++++++..++..+.+||. ++.+|.|......++
T Consensus 56 ~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l~~g~v-iv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~ 134 (356)
T PRK08056 56 EYRHLHQALARHHQVPASWILAGNGETESIFAVVSGLKPRRA-MIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDA 134 (356)
T ss_pred cHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhCCCCE-EEeCCCcHHHHHHHHHcCCeEEEEecccccCCCccHH
Confidence 468999999999975 3566666668888766655578874 556677654432221
Q ss_pred ------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-----cc-cCCCeEEEecccccc
Q 019543 112 ------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-----PL-ELGADIVMHSATKFI 155 (339)
Q Consensus 112 ------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-----~~-~~~~Di~~~S~sK~l 155 (339)
++|+++|++||++||+|++|....... .+ .....+++.||||++
T Consensus 135 ~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 214 (356)
T PRK08056 135 ILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFY 214 (356)
T ss_pred HHHhccCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhc
Confidence 778999999999999999985432211 11 123468999999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCCCceEEec
Q 019543 156 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNY 232 (339)
Q Consensus 156 ~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~ 232 (339)
+.+|.+ .||++++++.+.+.++... ..+..+.+.+.++...++ ......++.+++.+++.+.|+.++++. + +
T Consensus 215 ~~~G~R-iG~~v~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~ 289 (356)
T PRK08056 215 AIPGLR-LGYLVNSDDAAVARMRRQQ--MPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLT-V-W 289 (356)
T ss_pred cCcchh-heeeecCCHHHHHHHHHhC--CCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-E-c
Confidence 987754 5677775545666665432 223444444444433332 223335556777888889998877653 2 2
Q ss_pred CCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCC
Q 019543 233 AGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTED 312 (339)
Q Consensus 233 p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~ 312 (339)
|. .+..+++.+... ..+|++.|...|+.+..|..+. |...+
T Consensus 290 ~~----------------~~~~~~~~~~~~--~~~~~~~l~~~gI~v~~~~~f~---------------------~~~~~ 330 (356)
T PRK08056 290 PG----------------RANYLFLRCERP--DIDLQRALLTQRILIRSCANYP---------------------GLDSR 330 (356)
T ss_pred CC----------------CCcEEEEEcCCC--hHHHHHHHHHCCeEEEECCCCC---------------------CCCCC
Confidence 31 355677776422 3467777777788887664321 11346
Q ss_pred eEEEEecc-CCHHHHHHHHHHHH
Q 019543 313 LVRISVGI-EDVNDLISDLDKAL 334 (339)
Q Consensus 313 ~lRisvg~-e~~~~li~~l~~al 334 (339)
.||||++. ++.+.+++.|.+.+
T Consensus 331 ~iRis~~~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 331 YYRVAIRSAAENERLLAALRNVL 353 (356)
T ss_pred EEEEEEcCHHHHHHHHHHHHHHH
Confidence 89999997 44555555555544
No 163
>PRK08175 aminotransferase; Validated
Probab=99.71 E-value=1.9e-15 Score=145.35 Aligned_cols=238 Identities=12% Similarity=0.052 Sum_probs=143.4
Q ss_pred HHHHHHHHHhHh----CC----C-eEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 57 RDALESLLAKLD----KA----D-RALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~----g~----~-~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
..+|++.+++++ |. + ++++++++++++..+ ..+++|||+|++++|.|+.....+.
T Consensus 69 ~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 148 (395)
T PRK08175 69 IPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGV 148 (395)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCC
Confidence 345555555543 32 3 355555557888754 4578999999999998875432111
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc----Ccc---c--CCC
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS----RPL---E--LGA 144 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~----~~~---~--~~~ 144 (339)
++|+++|++||++||+|++++...+. ..+ . .+.
T Consensus 149 ~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~ 228 (395)
T PRK08175 149 DFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDV 228 (395)
T ss_pred CcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccC
Confidence 78999999999999999999643321 111 1 122
Q ss_pred eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEF 220 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~~ 220 (339)
.+++.||||.+|.+|. +.||++++ +++++.+...........+......+...++. +...++..+++.+.+.+.
T Consensus 229 ~i~~~S~SK~~g~pGl-RiG~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 306 (395)
T PRK08175 229 AVEFFTLSKSYNMAGW-RIGFMVGN-PELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKG 306 (395)
T ss_pred EEEEeeccccccCcch-hheeeeCC-HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4778999999987764 45788776 47888887766544443333332222222322 333455556677788888
Q ss_pred HhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHH---HHHHHHccC-CcceeecccCCcccceeccccccC
Q 019543 221 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA---LSKHVVETT-KYFSITVSFGSVKSLISMPCFMSH 296 (339)
Q Consensus 221 L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~---~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h 296 (339)
|+.. ++. +..| ..|..+++.+.+.. ...+|++.+ +..|+.+..|..+. +
T Consensus 307 L~~~-~~~-~~~p----------------~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~----~----- 359 (395)
T PRK08175 307 LHEA-GWM-VEMP----------------KASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFG----D----- 359 (395)
T ss_pred HHHc-CCc-ccCC----------------CEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhC----c-----
Confidence 8876 332 2112 14668888875432 245677654 46788877664321 1
Q ss_pred CCCCHHHHHhCCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Q 019543 297 ASIPVEVRQARGLTEDLVRISVGIE--DVNDLISDLDKALR 335 (339)
Q Consensus 297 ~~~~~~~~~~~g~~~~~lRisvg~e--~~~~li~~l~~al~ 335 (339)
..++.+||+++.+ ..++.++.|.+.++
T Consensus 360 ------------~~~~~lRis~~~~~~~~~~al~~l~~~l~ 388 (395)
T PRK08175 360 ------------YGDTHVRFALIENRDRIRQAIRGIKAMFR 388 (395)
T ss_pred ------------CCCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 1246799999742 12233444444444
No 164
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.71 E-value=8.6e-16 Score=145.74 Aligned_cols=232 Identities=15% Similarity=0.168 Sum_probs=143.4
Q ss_pred CchHHHHHHHHHhHhCCC--eEEEcCcH-HHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH------------------
Q 019543 54 NPTRDALESLLAKLDKAD--RALCFTSG-MAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~--~~l~~~sG-~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
.+...+|++.+++++|.+ +.+++++| ++++..++ .+++|||+|+++++.|......++
T Consensus 68 ~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 147 (361)
T PRK00950 68 EPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLD 147 (361)
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcC
Confidence 445689999999999864 45554667 45666544 467999999999988765432221
Q ss_pred ------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--cc--cCCCeEEEecccccccc
Q 019543 112 ------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR--PL--ELGADIVMHSATKFIAG 157 (339)
Q Consensus 112 ------------------------------~~I~~la~~~g~~livD~a~a~g~~~~--~~--~~~~Di~~~S~sK~l~g 157 (339)
++|.++|+++|+++|+|++|....... .+ ....-++++||||.+|.
T Consensus 148 ~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~ 227 (361)
T PRK00950 148 VDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGL 227 (361)
T ss_pred HHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcC
Confidence 899999999999999999996432111 11 11224788999999987
Q ss_pred CCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceEEecCC
Q 019543 158 HSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 234 (339)
Q Consensus 158 ~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~ 234 (339)
+| .+.|++++++ ++++.++.....+ .+++...+.+...++. ++...++.+++.+++.+.|+ +. + +|
T Consensus 228 ~G-lRiG~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~-~-~~- 296 (361)
T PRK00950 228 AG-LRIGYGFVPE-WLIDYYMRAKTPF--SLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FK-V-YP- 296 (361)
T ss_pred ch-hhcchhcCCH-HHHHHHHHhcCCC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----ee-E-CC-
Confidence 66 4457887764 6777776554322 3455544444444432 22223333344444444443 21 1 22
Q ss_pred CCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeE
Q 019543 235 LPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 314 (339)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~l 314 (339)
..+..+++.+.+ ....+|++.|...|+.+..|..+ + +..++.|
T Consensus 297 ---------------~~~~~i~~~~~~-~~~~~~~~~l~~~gv~v~~~~~f-----~----------------~~~~~~l 339 (361)
T PRK00950 297 ---------------SEANFVLVDVTP-MTAKEFCEELLKRGVIVRDCTSF-----R----------------GLGDYYI 339 (361)
T ss_pred ---------------CcceEEEEECCC-CCHHHHHHHHHHCCEEEeeCCcc-----C----------------CCCCCeE
Confidence 135678887732 24567888877778877755321 1 0134689
Q ss_pred EEEeccCCHHHHHHHHHHHHhc
Q 019543 315 RISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 315 Risvg~e~~~~li~~l~~al~~ 336 (339)
|||++. ++.++.+.++|++
T Consensus 340 Ris~~~---~~~~~~l~~~L~~ 358 (361)
T PRK00950 340 RVSIGT---FEENERFLEILKE 358 (361)
T ss_pred EEECCC---HHHHHHHHHHHHH
Confidence 999983 2345566666654
No 165
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.71 E-value=3.5e-15 Score=141.40 Aligned_cols=233 Identities=15% Similarity=0.175 Sum_probs=151.9
Q ss_pred chHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH---------------------
Q 019543 55 PTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS--------------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~--------------------- 111 (339)
+...+|++.++++++. ++.++++++++++..++..+.+ |.|++++|.|+.....++
T Consensus 54 ~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 132 (354)
T PRK06358 54 PDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVTKP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANE 132 (354)
T ss_pred ccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHhCC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccH
Confidence 4467899999999875 4566666668888866655555 678889988765443221
Q ss_pred -------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc---c-CCCeEEEeccc
Q 019543 112 -------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL---E-LGADIVMHSAT 152 (339)
Q Consensus 112 -------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~---~-~~~Di~~~S~s 152 (339)
++|+++|++||+++|+|++|....... .+ . ..--|++.|||
T Consensus 133 ~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 212 (354)
T PRK06358 133 IVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFT 212 (354)
T ss_pred HHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEech
Confidence 889999999999999999996433211 11 1 11238899999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
|.++.+|. +.||++++++.+.+.+..... ...++.....++...++ .+...++...++.+.+.+.|+.++++.
T Consensus 213 K~~gl~G~-RiG~lv~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~- 288 (354)
T PRK06358 213 KFFAIPGL-RLGYGLTSNKNLAEKLLQMRE--PWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIK- 288 (354)
T ss_pred hhccCcch-hheeeecCCHHHHHHHHHhCC--CCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-
Confidence 99997774 567877765567777765542 33445544444444443 234455666777888889998876543
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 309 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~ 309 (339)
+..| .|+.+++.+.+. .+|++.|...|+.+..|..+. +.
T Consensus 289 ~~~~-----------------~g~f~~~~~~~~---~~~~~~l~~~gI~v~~~~~f~---------------------~~ 327 (354)
T PRK06358 289 VYKP-----------------SVNFIFFKLEKP---IDLRKELLKKGILIRSCSNYR---------------------GL 327 (354)
T ss_pred EcCC-----------------cceEEEEEcCch---HHHHHHHHHCCeEEEECCCCC---------------------CC
Confidence 2212 355777777543 467777767788877665321 01
Q ss_pred CCCeEEEEecc-CCHHHHHHHHHHH
Q 019543 310 TEDLVRISVGI-EDVNDLISDLDKA 333 (339)
Q Consensus 310 ~~~~lRisvg~-e~~~~li~~l~~a 333 (339)
.++.||||++. ++.+.+++.|.+.
T Consensus 328 ~~~~iRls~~~~~~~~~l~~~l~~~ 352 (354)
T PRK06358 328 DENYYRVAVKSREDNKKLLKALEVI 352 (354)
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 34679999997 4455555555443
No 166
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.71 E-value=2e-15 Score=144.43 Aligned_cols=236 Identities=14% Similarity=0.118 Sum_probs=150.5
Q ss_pred CCCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 52 SGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
+..+...+|++.+++++|.+ ++++++++++++..++ .+++|||+|++++|.|+......+
T Consensus 83 Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~ 162 (380)
T PLN03026 83 YPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSL 162 (380)
T ss_pred CCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCc
Confidence 33456789999999999854 4545555577887654 478999999999998764321111
Q ss_pred --------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-Cc---c-cCCCeEEEeccccc
Q 019543 112 --------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RP---L-ELGADIVMHSATKF 154 (339)
Q Consensus 112 --------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~---~-~~~~Di~~~S~sK~ 154 (339)
+++.++++.. +++|+||+|...... .. . .....|++.||||.
T Consensus 163 d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~ 241 (380)
T PLN03026 163 DVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKR 241 (380)
T ss_pred CHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHh
Confidence 7888888754 999999999633221 11 1 12335899999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch---hhHHHHHHHHHHHHHHHHHHHhCCCCceEEe
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFLASHPRVKKVN 231 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l---~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~ 231 (339)
+|.+|. +.||+++++ ++++.+...+.. ..++.....++...| +.+....++..++.+++.+.|+.++.+. +
T Consensus 242 ~glaGl-RiGy~~~~~-~~i~~l~~~~~~--~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~- 315 (380)
T PLN03026 242 AGLAGL-RVGYGAFPL-SIIEYLWRAKQP--YNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLE-P- 315 (380)
T ss_pred hcCccc-cceeeecCH-HHHHHHHHhcCC--CCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCe-E-
Confidence 987664 567888764 677777655432 334444333333334 2334445556677778888888775432 1
Q ss_pred cCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCC
Q 019543 232 YAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 311 (339)
Q Consensus 232 ~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~ 311 (339)
+|. .+..+++.+.+.....+|.+.|...|+.++.+.. + + .+
T Consensus 316 ~p~----------------~~~f~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~------~----------------~-~~ 356 (380)
T PLN03026 316 YPS----------------DANFILCRVTSGRDAKKLKEDLAKMGVMVRHYNS------K----------------E-LK 356 (380)
T ss_pred CCC----------------CCeEEEEECCCCCCHHHHHHHHHHCCeEEEECCC------C----------------C-CC
Confidence 331 4567778775322345777777777888765421 1 0 24
Q ss_pred CeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 312 DLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 312 ~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+.+|||++.. +..+.|.+||++
T Consensus 357 ~~lRis~~~~---~~~~~l~~al~~ 378 (380)
T PLN03026 357 GYIRVSVGKP---EHTDALMEALKQ 378 (380)
T ss_pred CEEEEecCCH---HHHHHHHHHHHH
Confidence 6899999943 234466776664
No 167
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.71 E-value=2.4e-15 Score=144.89 Aligned_cols=239 Identities=13% Similarity=0.051 Sum_probs=146.6
Q ss_pred hHHHHHHHHHhHhC-------CCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 56 TRDALESLLAKLDK-------ADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g-------~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
...+|++.++++++ .+++++++++++|+..+ ..++++||+|+++++.|......++
T Consensus 74 g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~ 153 (401)
T TIGR01264 74 GALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKS 153 (401)
T ss_pred CCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccC
Confidence 45678888888775 34677888889999754 4578999999999998865543222
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc-cC--C-CeE
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL-EL--G-ADI 146 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~-~~--~-~Di 146 (339)
++|+++|+++|++||+|++|....+.. ++ .. . --|
T Consensus 154 ~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi 233 (401)
T TIGR01264 154 WEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPIL 233 (401)
T ss_pred CCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEE
Confidence 889999999999999999997433211 11 11 1 137
Q ss_pred EEeccccccccCCCceEEEEEEcCh-----hHHHHHHHHHHhcCCCCChHHHHHHHhchh-----hHHHHHHHHHHHHHH
Q 019543 147 VMHSATKFIAGHSDVMAGVLAVKGE-----RLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQK 216 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~~~~-----~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~-----~~~~r~~~~~~~a~~ 216 (339)
++.||||.++.+|. +.||+++++. ++++.++.... .....+.....++...|+ .+...+++..++.+.
T Consensus 234 ~~~SfSK~~~~~Gl-RiG~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~ 311 (401)
T TIGR01264 234 SCGGLAKRWLVPGW-RLGWIIIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAML 311 (401)
T ss_pred EEccCcccCCCccc-eEEEEEecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 88999999888774 5667777642 22233333221 122334443333333332 234445666677788
Q ss_pred HHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-----HHHHHHHHccC-CcceeecccCCcccceec
Q 019543 217 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----LALSKHVVETT-KYFSITVSFGSVKSLISM 290 (339)
Q Consensus 217 l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-----~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~ 290 (339)
+.+.|+.++++. +..| ..|..+++.+.. .....++++.+ +..|+.+..|..+.
T Consensus 312 l~~~L~~~~~~~-~~~p----------------~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~---- 370 (401)
T TIGR01264 312 CYGALAAVPGLR-PVMP----------------SGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFE---- 370 (401)
T ss_pred HHHHHHhCCCCc-ccCC----------------CeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcC----
Confidence 888898876542 1222 135566666532 11235666665 46788777654321
Q ss_pred cccccCCCCCHHHHHhCCCCCCeEEEEeccC--CHHHHHHHHHHHHhc
Q 019543 291 PCFMSHASIPVEVRQARGLTEDLVRISVGIE--DVNDLISDLDKALRT 336 (339)
Q Consensus 291 p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e--~~~~li~~l~~al~~ 336 (339)
.++.+|||++.. +.++-++.|.+.+++
T Consensus 371 -------------------~~~~iRis~~~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 371 -------------------YPGFFRVVLTVPVVMMEEACSRIQEFCER 399 (401)
T ss_pred -------------------CCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 136799999963 233445556555543
No 168
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.70 E-value=4.9e-15 Score=143.24 Aligned_cols=223 Identities=10% Similarity=0.045 Sum_probs=140.3
Q ss_pred HHHHHHHHHhHhC--------------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------
Q 019543 57 RDALESLLAKLDK--------------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------- 111 (339)
Q Consensus 57 ~~~le~~la~~~g--------------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------- 111 (339)
..+|++.++++++ .+++++++++++|+..++ .+++|||+|++++|.|......++
T Consensus 77 ~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~ 156 (412)
T PTZ00433 77 SPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYN 156 (412)
T ss_pred cHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEe
Confidence 4567777777654 245677777789998644 578999999999998876543222
Q ss_pred -------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-c---c-cC-
Q 019543 112 -------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-P---L-EL- 142 (339)
Q Consensus 112 -------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-~---~-~~- 142 (339)
++|+++|++||++||+|++|....+.. . + ..
T Consensus 157 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 236 (412)
T PTZ00433 157 CRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFD 236 (412)
T ss_pred cCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhcc
Confidence 888999999999999999997433211 1 1 11
Q ss_pred --CCeEEEeccccccccCCCceEEEEEE-cC----hhHHHHHHHHHHhcCCCCChHHHHHHHhchh-----hHHHHHHHH
Q 019543 143 --GADIVMHSATKFIAGHSDVMAGVLAV-KG----ERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQ 210 (339)
Q Consensus 143 --~~Di~~~S~sK~l~g~~~~~gG~v~~-~~----~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~-----~~~~r~~~~ 210 (339)
..-|+++||||.++.+|. +.||+++ ++ +++++.++.... .....+.....++...+. .+....++.
T Consensus 237 ~~~~~i~~~SfSK~~~~pGl-RlG~~i~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 314 (412)
T PTZ00433 237 TTVPRVILGGTAKNLVVPGW-RLGWLLLVDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNTPQEHLEQIVAKL 314 (412)
T ss_pred CCCceEEEccchhhcCCCCe-eEEEEEEeCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 113788999999987775 4567765 22 245555554432 223455554443333332 234445566
Q ss_pred HHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-----HHHHHHHccCC-cceeecccCCc
Q 019543 211 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVVETTK-YFSITVSFGSV 284 (339)
Q Consensus 211 ~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-----~~~~~~~~~L~-~~~i~v~~G~~ 284 (339)
.++.+.+.+.|+.+.++. +..| ..|..+++.++.. ....+|++.|. ..|+.+..|..
T Consensus 315 ~~~r~~l~~~L~~~~~~~-~~~p----------------~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~ 377 (412)
T PTZ00433 315 EEGAMVLYNHIGECIGLS-PTMP----------------RGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEI 377 (412)
T ss_pred HHHHHHHHHHHhcCCCCc-ccCC----------------CeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccc
Confidence 677788888888765432 1112 1345667766431 13457777774 56888776643
Q ss_pred ccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccC
Q 019543 285 KSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE 321 (339)
Q Consensus 285 ~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e 321 (339)
+. .++.+|||++..
T Consensus 378 f~-----------------------~~~~iRis~~~~ 391 (412)
T PTZ00433 378 FH-----------------------MPGFTRLTISRP 391 (412)
T ss_pred cC-----------------------CCCeEEEEecCC
Confidence 21 135799999964
No 169
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.70 E-value=3.9e-15 Score=143.20 Aligned_cols=229 Identities=18% Similarity=0.197 Sum_probs=139.7
Q ss_pred chHHHHHHHHHhHhCC-----C-eEEEcCcHHHHHHHHH-HhcCC---CCEEEEcCCCccchHHHHH-------------
Q 019543 55 PTRDALESLLAKLDKA-----D-RALCFTSGMAALAAVT-HLLGT---GEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~-----~-~~l~~~sG~~A~~~il-~ll~~---GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
.+++++.+.+.+.+|. + ++++++++++|+..++ .+++| ||+|++++|.|......++
T Consensus 69 ~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~ 148 (396)
T PRK09147 69 ALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDP 148 (396)
T ss_pred HHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCc
Confidence 3444445544444452 3 4556666789997654 57899 9999999998875432221
Q ss_pred ----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c---c----c
Q 019543 112 ----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P---L----E 141 (339)
Q Consensus 112 ----------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~---~----~ 141 (339)
++|+++|++||++||+||+|+...+.. + + .
T Consensus 149 ~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 228 (396)
T PRK09147 149 ANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAE 228 (396)
T ss_pred cccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccc
Confidence 889999999999999999997543211 1 1 0
Q ss_pred CC-----CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch---hhHHHHHHHHHHH
Q 019543 142 LG-----ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDN 213 (339)
Q Consensus 142 ~~-----~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l---~~~~~r~~~~~~~ 213 (339)
.+ --|++.||||.++.+| .+.||+++++ .+++.+.......+..+++....++...+ +.+...+++.+++
T Consensus 229 ~~~~~~~~vi~~~S~SK~~~~~G-lRiG~~~~~~-~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~ 306 (396)
T PRK09147 229 LGRDDFKRLVVFHSLSKRSNVPG-LRSGFVAGDA-ALLKKFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREK 306 (396)
T ss_pred cCccccccEEEEeccccccCCcc-ceeeeecCCH-HHHHHHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHH
Confidence 11 1389999999988777 4567887764 67777776655455556655444333333 2234445555666
Q ss_pred HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcccceeccc
Q 019543 214 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPC 292 (339)
Q Consensus 214 a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~ 292 (339)
.+.+.+.|+.+ +. +..| ..|..+++.+.. ...+|++.| +..|+.+..|..+.. .+.
T Consensus 307 ~~~~~~~L~~~--~~-~~~p----------------~~g~f~~~~~~~--~~~~~~~~ll~~~gv~v~pg~~f~~--~~~ 363 (396)
T PRK09147 307 FDAVTPILAPV--LD-VQLP----------------DAGFYLWAKVPG--DDTEFARRLYADYNVTVLPGSYLAR--EAH 363 (396)
T ss_pred HHHHHHHHHHh--cC-CCCC----------------CeeEEEEEECCC--CHHHHHHHHHHhCCEEEeCCccccc--ccc
Confidence 66677777653 11 1122 145677777751 234566665 456888877754321 000
Q ss_pred cccCCCCCHHHHHhCCCCCCeEEEEeccC
Q 019543 293 FMSHASIPVEVRQARGLTEDLVRISVGIE 321 (339)
Q Consensus 293 ~~~h~~~~~~~~~~~g~~~~~lRisvg~e 321 (339)
. . .-..+.+||+++..
T Consensus 364 ----~-~--------~~~~~~iRi~~~~~ 379 (396)
T PRK09147 364 ----G-V--------NPGAGRVRIALVAP 379 (396)
T ss_pred ----C-C--------CCCCCeEEEEecCC
Confidence 0 0 01346899999964
No 170
>PRK08363 alanine aminotransferase; Validated
Probab=99.70 E-value=4.5e-15 Score=142.84 Aligned_cols=241 Identities=16% Similarity=0.121 Sum_probs=145.3
Q ss_pred chHHHHHHHHHhHhC--------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 55 PTRDALESLLAKLDK--------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g--------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
+...+|++.++++++ .++.++++++++|+..++ .+++|||+|+++++.|......+.
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~ 149 (398)
T PRK08363 70 EGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEE 149 (398)
T ss_pred CCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccc
Confidence 445678888888763 235677777789998654 578999999999998876543221
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c---cc-CCCe
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P---LE-LGAD 145 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~---~~-~~~D 145 (339)
++|+++|+++|+++|+|++|+...+.. . +. ..--
T Consensus 150 ~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~v 229 (398)
T PRK08363 150 EGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPV 229 (398)
T ss_pred cCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcE
Confidence 789999999999999999987533211 1 11 1123
Q ss_pred EEEeccccccccCCCceEEEEEE-cChhHHHHHHHHHHh---cCCCCChHHHHHHHhch----hhHHHHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAV-KGERLAKELYFLQNA---EGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKI 217 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~-~~~~l~~~l~~~~~~---~~~~~~~~~a~~~~~~l----~~~~~r~~~~~~~a~~l 217 (339)
+++.||||.++.+|. +.||+++ +++.+++.++..... .....+.....++...| +.+....++.+++.+.+
T Consensus 230 i~~~SfSK~~~~~Gl-RiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l 308 (398)
T PRK08363 230 IVMNGLSKVYFATGW-RLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYI 308 (398)
T ss_pred EEEecchhccCCccc-eEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 778999999887764 4567776 344566665544321 12334444333332222 23445556667778888
Q ss_pred HHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEE-eeCCH--HHHHHHH-ccCCcceeecccCCcccceecccc
Q 019543 218 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LTGSL--ALSKHVV-ETTKYFSITVSFGSVKSLISMPCF 293 (339)
Q Consensus 218 ~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~-~~~~~--~~~~~~~-~~L~~~~i~v~~G~~~s~~~~p~~ 293 (339)
.+.|+.++++. +..| .++++.+ .+.+. ....+++ ..|+..|+.+..|..+..
T Consensus 309 ~~~L~~~~~~~-~~~p-----------------~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~------ 364 (398)
T PRK08363 309 YKRLNEIPGIS-TTKP-----------------QGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGE------ 364 (398)
T ss_pred HHHHhcCCCCE-ecCC-----------------CeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCC------
Confidence 88888876643 2222 3444444 55421 1123443 335677888776654210
Q ss_pred ccCCCCCHHHHHhCCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Q 019543 294 MSHASIPVEVRQARGLTEDLVRISVGIE--DVNDLISDLDKALR 335 (339)
Q Consensus 294 ~~h~~~~~~~~~~~g~~~~~lRisvg~e--~~~~li~~l~~al~ 335 (339)
..++.+|||++.. +.++.++.|.+.++
T Consensus 365 ---------------~~~~~iRis~~~~~~~l~~~l~~l~~~~~ 393 (398)
T PRK08363 365 ---------------YGAGHFRLVFLPPVEILEEAMDRFEEFMR 393 (398)
T ss_pred ---------------CCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 0246899999743 22333444444443
No 171
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.70 E-value=6.6e-15 Score=141.93 Aligned_cols=224 Identities=12% Similarity=0.056 Sum_probs=135.5
Q ss_pred hHHHHHHHHHhHhCC----C-eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH------------------
Q 019543 56 TRDALESLLAKLDKA----D-RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~----~-~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
+++++.+.+.+..|. + ++++++++++|+..++ .+++|||.|++++|.|+.....+.
T Consensus 76 lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 155 (403)
T PRK08636 76 LRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFE 155 (403)
T ss_pred HHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCc
Confidence 344555555444352 3 4666666689988654 588999999999998865431111
Q ss_pred ------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----c---ccC
Q 019543 112 ------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----P---LEL 142 (339)
Q Consensus 112 ------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~---~~~ 142 (339)
++|+++|++||++||+||+|+...+.. + +..
T Consensus 156 ~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~ 235 (403)
T PRK08636 156 LDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEG 235 (403)
T ss_pred cChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCC
Confidence 889999999999999999997443211 1 111
Q ss_pred --CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHH---HHhchhh-HHHHHHHHHHHHHH
Q 019543 143 --GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI---CLRGVKT-MALRVEKQQDNAQK 216 (339)
Q Consensus 143 --~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~---~~~~l~~-~~~r~~~~~~~a~~ 216 (339)
...|+++||||.++.+| .+.||++++ +++++.+.......+...+.....+ ++..-+. +....+...++.+.
T Consensus 236 ~~~~~i~~~S~SK~~~~~G-lRiG~iv~~-~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (403)
T PRK08636 236 AKDVAVESYTLSKSYNMAG-WRVGFVVGN-KKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDV 313 (403)
T ss_pred ccccEEEEEecccccCCcc-ceeeeeeCC-HHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 12366899999998766 456788775 4788877776553333333222222 2221122 33344555667777
Q ss_pred HHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH---HHHHHHHcc-CCcceeecccCCcccceeccc
Q 019543 217 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---ALSKHVVET-TKYFSITVSFGSVKSLISMPC 292 (339)
Q Consensus 217 l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~---~~~~~~~~~-L~~~~i~v~~G~~~s~~~~p~ 292 (339)
+.+.|+.. ++. +..| ..|..+++.+.+. ....+|++. ++..|+.+..|..+. +
T Consensus 314 l~~~L~~~-~~~-~~~p----------------~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~----~- 370 (403)
T PRK08636 314 LIESFANA-GWE-LQKP----------------RASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFG----E- 370 (403)
T ss_pred HHHHHHHC-CCc-ccCC----------------CcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhC----c-
Confidence 88888875 332 1112 1356777777532 123566655 445688777664321 0
Q ss_pred cccCCCCCHHHHHhCCCCCCeEEEEecc
Q 019543 293 FMSHASIPVEVRQARGLTEDLVRISVGI 320 (339)
Q Consensus 293 ~~~h~~~~~~~~~~~g~~~~~lRisvg~ 320 (339)
..++.+||+++.
T Consensus 371 ----------------~~~~~iRi~~~~ 382 (403)
T PRK08636 371 ----------------YGDEYVRIALIE 382 (403)
T ss_pred ----------------CCCCeEEEEecC
Confidence 124689999984
No 172
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.69 E-value=2.1e-15 Score=144.28 Aligned_cols=199 Identities=16% Similarity=0.137 Sum_probs=118.8
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEeccccccccCCCceEEEEEEcChh-HHHHHH--H-HHHhcCC
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELY--F-LQNAEGS 186 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~-l~~~l~--~-~~~~~~~ 186 (339)
++|.++|+++|+++++|++++.|.. .+....++|+++.|++|++|++| .|+++.++.. +...+. . .......
T Consensus 160 ~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G---~g~l~vr~~~~~~p~~~g~~~~~~~~~g 236 (382)
T TIGR03403 160 KEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKG---VGGLYIRKGVELTPLFHGGEHMGGRRSG 236 (382)
T ss_pred HHHHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCCCCc---eEEEEECCCCCCCCcccCCCCCCCcccC
Confidence 9999999999999999999988754 34445689999999999876444 2566555421 101000 0 0000012
Q ss_pred CCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH
Q 019543 187 GLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 262 (339)
Q Consensus 187 ~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~ 262 (339)
+.+....+.+..+++ .++...++.++.++++.+.|+++++++.+. |. .+ ...+++.|.+.+.
T Consensus 237 t~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~-~~--~~-----------~~~~~~~~~~~~~ 302 (382)
T TIGR03403 237 TLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVG-DR--EH-----------RVPNTILISIKGV 302 (382)
T ss_pred CcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEEC-CC--CC-----------CcCCEEEEEeCCC
Confidence 222222212222222 234445556677888888898888875332 21 00 0234677777543
Q ss_pred HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCC----CCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 263 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 263 ~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~----~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+ ...+...|...+|.++.|...+ ...+. +...+..+|.. .+.||+|++..++++.|+.+.++|++
T Consensus 303 ~-~~~~~~~L~~~gI~v~~g~~c~------~~~~~--~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~ 371 (382)
T TIGR03403 303 E-GEAMLWDLNKAGIAASTGSACA------SEDLE--ANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK 371 (382)
T ss_pred C-HHHHHHhhccCCEEEEchhccC------CCCCC--cCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence 2 3355666888899999774321 11111 01233445543 36899999999988888988888864
No 173
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.69 E-value=4.3e-15 Score=141.49 Aligned_cols=235 Identities=14% Similarity=0.064 Sum_probs=151.6
Q ss_pred CchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-Hhc------CCCCEEEEcCCCccchHHHHH-------------
Q 019543 54 NPTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLL------GTGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll------~~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
.+..+++++.+++++|.+ ..+++++|+.++..++ .+. ++||+|+++++.|..+....+
T Consensus 58 ~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~ 137 (373)
T TIGR03812 58 KKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDE 137 (373)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCC
Confidence 355689999999999975 4578888988876433 221 478999999876655432211
Q ss_pred -----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc--------Ccc---cCCCe
Q 019543 112 -----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS--------RPL---ELGAD 145 (339)
Q Consensus 112 -----------------------------------~~I~~la~~~g~~livD~a~a~g~~~--------~~~---~~~~D 145 (339)
++|.++|+++|+++++|++|+.+... ..+ ..++|
T Consensus 138 ~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d 217 (373)
T TIGR03812 138 DYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQ 217 (373)
T ss_pred CCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCC
Confidence 99999999999999999999754310 111 13678
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhc-CC-------CCChHHHHHHHhchh-----hHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-GS-------GLAPFDCWICLRGVK-----TMALRVEKQQD 212 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~-~~-------~~~~~~a~~~~~~l~-----~~~~r~~~~~~ 212 (339)
.++.|.+|+..++. ..||+++.++ ++.+.++....+. +. +.+....+.+...++ .++.+.++..+
T Consensus 218 ~~~~s~~K~~~~~~-~~G~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~ 295 (373)
T TIGR03812 218 SITIDPHKMGLSPI-PAGGILFRSK-SYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECME 295 (373)
T ss_pred EEEECccccCCCcC-CceEEEEeCH-HHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 99999999654332 3455665554 5666553211111 11 112222222222333 23456777888
Q ss_pred HHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccc
Q 019543 213 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPC 292 (339)
Q Consensus 213 ~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~ 292 (339)
+++++++.|++++.. .+ ++ +..+++.|.+++. ..+.+.|...|+.++.+.
T Consensus 296 ~~~~l~~~L~~~g~~-~~-~~----------------~~~~~v~~~~~~~---~~v~~~L~~~gi~v~~~~--------- 345 (373)
T TIGR03812 296 NTRYLVEELKKIGFE-PV-IE----------------PVLNIVAFEVDDP---EEVRKKLRDRGWYVSVTR--------- 345 (373)
T ss_pred HHHHHHHHHHhCCCe-EE-cC----------------CCceEEEEEeCCH---HHHHHHHHHCCceeccCC---------
Confidence 899999999887532 12 11 1346777877643 356666766676654210
Q ss_pred cccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 293 FMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 293 ~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
.+..||+|++..++++.++.+.++|+++
T Consensus 346 -----------------~~~~iRis~~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 346 -----------------CPKALRIVVMPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred -----------------CCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence 2357999999988899999999998764
No 174
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.69 E-value=1.2e-15 Score=145.57 Aligned_cols=237 Identities=19% Similarity=0.223 Sum_probs=153.3
Q ss_pred CCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhc----C----CCCEEEEcCCCccchH---------------
Q 019543 51 RSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL----G----TGEEIVAGDDLYGGTD--------------- 107 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll----~----~GD~Vi~~~~~y~~~~--------------- 107 (339)
++.++.+.+||+++++++|.+++++++||++|+..++.++ . +||+|++.++.|++..
T Consensus 65 ~~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~ 144 (379)
T TIGR00707 65 LYYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKG 144 (379)
T ss_pred ccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhcc
Confidence 3457889999999999999999999999999997544422 2 4799999888775321
Q ss_pred ----------------HHHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCcc-
Q 019543 108 ----------------RLLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRPL- 140 (339)
Q Consensus 108 ----------------~~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~~- 140 (339)
..+. ++|.++|++||+++|+||+|. .+..+...
T Consensus 145 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~ 224 (379)
T TIGR00707 145 FEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFA 224 (379)
T ss_pred CCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhh
Confidence 0000 789999999999999999996 32222111
Q ss_pred ----cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH--HHHHHHHHHHH
Q 019543 141 ----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNA 214 (339)
Q Consensus 141 ----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~--~~r~~~~~~~a 214 (339)
....|++ |+||.++ +| ...|++++++ ++++.+...........++...+.+...|+.+ ....++.+++.
T Consensus 225 ~~~~~~~~d~~--t~sK~~~-~G-~riG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~ 299 (379)
T TIGR00707 225 YEHYGIEPDII--TLAKGLG-GG-VPIGATLAKE-EVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKG 299 (379)
T ss_pred HHhcCCCCCEE--EEccccc-CC-cccEEEEEcH-HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 1233544 6899999 44 4467787764 67666654322223445666666665555533 23456666777
Q ss_pred HHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccc
Q 019543 215 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 215 ~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~ 294 (339)
+++++.|++... . ..... ..+.|.++++.+++. ..+|.+.|...|+.++.+
T Consensus 300 ~~~~~~l~~~~~-~-~~~~~-------------~~~~g~~~~~~~~~~--~~~~~~~l~~~Gv~v~~~------------ 350 (379)
T TIGR00707 300 DYFKERLEELGK-N-YPNKE-------------VRGKGLMLGIELEAP--CKDIVKKALEKGLLVNCA------------ 350 (379)
T ss_pred HHHHHHHHHHHh-h-CCCCc-------------cccCceEEEEEecCc--HHHHHHHHHHCCcEEeeC------------
Confidence 777777765311 0 00000 122466888887542 457788887777765421
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+.+|+++....+++.++.+.++|++
T Consensus 351 ---------------~~~~lRi~~~~~~t~~~i~~~~~~l~~ 377 (379)
T TIGR00707 351 ---------------GPKVLRFLPPLIITKEEIDEAVSALEE 377 (379)
T ss_pred ---------------CCCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 126799998876667767777777654
No 175
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.69 E-value=7.5e-15 Score=140.98 Aligned_cols=239 Identities=13% Similarity=0.144 Sum_probs=146.3
Q ss_pred HHHHHHHHHhHh----CC-----CeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 57 RDALESLLAKLD----KA-----DRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~----g~-----~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
..+|++.+++++ |. +++++++++++|+.++ ..++++||+|+++++.|.+....++
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 148 (391)
T PRK07309 69 LLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTEND 148 (391)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcC
Confidence 456777777665 32 3577777779999754 4578999999999998876543222
Q ss_pred ----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cC---cc-cC--CC
Q 019543 112 ----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SR---PL-EL--GA 144 (339)
Q Consensus 112 ----------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~---~~-~~--~~ 144 (339)
++|+++|++||+++|+|++|+...+ .. ++ .. .-
T Consensus 149 ~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~ 228 (391)
T PRK07309 149 FVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQ 228 (391)
T ss_pred CcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCC
Confidence 8899999999999999999975433 11 11 11 22
Q ss_pred eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEF 220 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~~ 220 (339)
.|++.||||.++.+| .+.|++++++ ++++.+...........++.....+...++. .....++..++.+.+.+.
T Consensus 229 ~i~~~S~SK~~g~~G-lRvG~~v~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 306 (391)
T PRK07309 229 TILINGLSKSHAMTG-WRIGLIFAPA-EFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEK 306 (391)
T ss_pred EEEEecChhhccCcc-ceeEEEEeCH-HHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHH
Confidence 489999999998766 4567888774 6777777655433334455444433333432 122234445667777788
Q ss_pred HhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccC-CcceeecccCCcccceeccccccCC
Q 019543 221 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHA 297 (339)
Q Consensus 221 L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~ 297 (339)
|+.+ ++. +..| ..+..+++.+.+. ....++++.+ +..|+.+..|..+. +
T Consensus 307 l~~~-~~~-~~~p----------------~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~----~------ 358 (391)
T PRK07309 307 MTDL-GFK-IIKP----------------DGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFG----P------ 358 (391)
T ss_pred HHHC-CCe-ecCC----------------CeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhC----C------
Confidence 8765 332 1112 1233456665422 1234566553 45688777664321 1
Q ss_pred CCCHHHHHhCCCCCCeEEEEeccC--CHHHHHHHHHHHHhc
Q 019543 298 SIPVEVRQARGLTEDLVRISVGIE--DVNDLISDLDKALRT 336 (339)
Q Consensus 298 ~~~~~~~~~~g~~~~~lRisvg~e--~~~~li~~l~~al~~ 336 (339)
..++.+||+++.+ +.++.++.|.+++++
T Consensus 359 -----------~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 359 -----------YGEGYVRLSYAASMETIKEAMKRLKEYMEE 388 (391)
T ss_pred -----------CCCCEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 1347899999863 233445555555543
No 176
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=2.8e-15 Score=142.24 Aligned_cols=232 Identities=15% Similarity=0.168 Sum_probs=148.6
Q ss_pred CchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 54 NPTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.+...+|++.++++++.+ +.++++++++++..++ .++++||+|++++|.|++......
T Consensus 63 ~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~ 142 (359)
T PRK03158 63 DGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLKDGGHDLE 142 (359)
T ss_pred CCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecCCCCcCHH
Confidence 345678999999999853 5666666688887554 578999999999998876543221
Q ss_pred ----------------------------HHHHHHHHH--cCCEEEEeCCcCCCCCcC----cc----cCCCeEEEecccc
Q 019543 112 ----------------------------RKIAEMAHA--HGALLLVDNSIMSPVLSR----PL----ELGADIVMHSATK 153 (339)
Q Consensus 112 ----------------------------~~I~~la~~--~g~~livD~a~a~g~~~~----~~----~~~~Di~~~S~sK 153 (339)
++|.++++. +|+++|+||+|....... .+ .....+++.||||
T Consensus 143 ~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 222 (359)
T PRK03158 143 AMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSK 222 (359)
T ss_pred HHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechH
Confidence 778888877 599999999996543221 11 1234688999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceEE
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKV 230 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~v 230 (339)
.++.+| .+.||+++++ ++++.+...+.. ...+.+...++...++. ++...++.+++.+++.+.|+++ ++..
T Consensus 223 ~~g~~G-lRiG~~v~~~-~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~- 296 (359)
T PRK03158 223 AYGLAA-LRVGYGIASE-ELIEKLNIARPP--FNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFY- 296 (359)
T ss_pred hhcCcc-hhhehhcCCH-HHHHHHHHhcCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCee-
Confidence 998766 4457887764 677777665432 34455554444444432 2333344455566677777765 3321
Q ss_pred ecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCC
Q 019543 231 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 310 (339)
Q Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~ 310 (339)
+|. .|..+++.++. ...++.+.|.+.|+.+..|..+ | .
T Consensus 297 -~~~----------------~g~~i~~~~~~--~~~~~~~~l~~~gv~v~~g~~f----------------------~-~ 334 (359)
T PRK03158 297 -YPS----------------QTNFIFVDTGR--DANELFEALLKKGYIVRSGAAL----------------------G-F 334 (359)
T ss_pred -CCC----------------cCcEEEEECCC--CHHHHHHHHHHCCeEEeeCCCC----------------------C-C
Confidence 231 35567777642 2356777776678887766432 1 1
Q ss_pred CCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 311 EDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 311 ~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
++.+|||++.. +..+.+.++|++
T Consensus 335 ~~~iRi~~~~~---~~~~~l~~al~~ 357 (359)
T PRK03158 335 PTGVRITIGLK---EQNDKIIELLKE 357 (359)
T ss_pred CCeEEEecCCH---HHHHHHHHHHHH
Confidence 36799999843 334456666654
No 177
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.68 E-value=2.6e-15 Score=144.88 Aligned_cols=238 Identities=17% Similarity=0.203 Sum_probs=156.4
Q ss_pred CCchHHHHHHHHHhHhC--CCeEEEcCcHHHHHHHHHHh---cCCCCEEEEcCCCccchH--------------------
Q 019543 53 GNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTD-------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g--~~~~l~~~sG~~A~~~il~l---l~~GD~Vi~~~~~y~~~~-------------------- 107 (339)
.++...+|+++++++++ .+.+++++||++|+.+++.+ ..++|.|++.++.|++..
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL 156 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 46788999999999998 78899999999999865542 367899999887666520
Q ss_pred ----------------------H----HHH----------------------------HHHHHHHHHcCCEEEEeCCcCC
Q 019543 108 ----------------------R----LLS----------------------------RKIAEMAHAHGALLLVDNSIMS 133 (339)
Q Consensus 108 ----------------------~----~~~----------------------------~~I~~la~~~g~~livD~a~a~ 133 (339)
. .+. ++|.++|++||+++|+||+|+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g 236 (413)
T cd00610 157 PGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTG 236 (413)
T ss_pred CCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 0 010 8999999999999999999963
Q ss_pred C-CCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHH--HHHHHhcCCCCChHHHHHHHhchhhHH-
Q 019543 134 P-VLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL--YFLQNAEGSGLAPFDCWICLRGVKTMA- 204 (339)
Q Consensus 134 g-~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l--~~~~~~~~~~~~~~~a~~~~~~l~~~~- 204 (339)
. ..+.. .....|+ .|+||++++ | ...|+++++ +++++.+ .......+...++...+.+...++.+.
T Consensus 237 ~g~~g~~~~~~~~~~~~d~--~t~sK~l~~-g-~~~g~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~ 311 (413)
T cd00610 237 FGRTGKMFAFEHFGVEPDI--VTLGKGLGG-G-LPLGAVLGR-EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE 311 (413)
T ss_pred CCcCcchhhHhhcCCCCCe--EEEcccccC-c-cccEEEEEc-HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 2 12211 1123354 478899997 4 445666665 4676665 111112244566766555555555443
Q ss_pred -HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--------HHHHHHHccCCcc
Q 019543 205 -LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--------ALSKHVVETTKYF 275 (339)
Q Consensus 205 -~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--------~~~~~~~~~L~~~ 275 (339)
...++.+++.+++.+.|+..... ++. ... ..+.|+++++.+.+. .....|.+.|...
T Consensus 312 ~~~~~~~~~~~~~l~~~l~~~~~~----~~~-~~~---------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 377 (413)
T cd00610 312 EGLLENAAELGEYLRERLRELAEK----HPL-VGD---------VRGRGLMIGIELVKDRATKPPDKELAAKIIKAALER 377 (413)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhh----CCc-EEE---------eecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHC
Confidence 34566667777777777654210 010 000 123678999987543 4566788888776
Q ss_pred eeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 276 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 276 ~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
|+.+..++ .+.+|+++...++++.++.+.++|++
T Consensus 378 gv~v~~~~---------------------------~~~lR~~~~~~~t~~~i~~~~~~l~~ 411 (413)
T cd00610 378 GLLLRPSG---------------------------GNVIRLLPPLIITEEEIDEGLDALDE 411 (413)
T ss_pred CeEEeecC---------------------------CCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 76554321 25799999999888888888887764
No 178
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.68 E-value=1.4e-14 Score=139.96 Aligned_cols=237 Identities=15% Similarity=0.052 Sum_probs=139.6
Q ss_pred HHHHHHHHhHh----C----CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 58 DALESLLAKLD----K----ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 58 ~~le~~la~~~----g----~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
.+|++.+++++ | .++.++++++++|+..++ .+++|||+|++++|.|......+.
T Consensus 77 ~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~ 156 (409)
T PLN00143 77 LPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGW 156 (409)
T ss_pred HHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCC
Confidence 34666666654 2 245777777789987654 588999999999999876532221
Q ss_pred ------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C---ccc-C---CCeEE
Q 019543 112 ------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R---PLE-L---GADIV 147 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~---~~~-~---~~Di~ 147 (339)
++|+++|++||++||+|++|....+. . ++. . ..-|+
T Consensus 157 ~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~ 236 (409)
T PLN00143 157 EVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVIT 236 (409)
T ss_pred cCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEE
Confidence 88999999999999999999754321 1 111 1 12388
Q ss_pred EeccccccccCCCceEEEEEEc-ChhHHHH---HHHHHHh--cCCCCChHHHHHHHhchh-----hHHHHHHHHHHHHHH
Q 019543 148 MHSATKFIAGHSDVMAGVLAVK-GERLAKE---LYFLQNA--EGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQK 216 (339)
Q Consensus 148 ~~S~sK~l~g~~~~~gG~v~~~-~~~l~~~---l~~~~~~--~~~~~~~~~a~~~~~~l~-----~~~~r~~~~~~~a~~ 216 (339)
++||||.++.+|.+ .||++++ ++.+.+. +..+... .....+.....++...|+ .+++.+++.+++.+.
T Consensus 237 ~~SfSK~f~~pGlR-vG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 315 (409)
T PLN00143 237 LGSISKRWMIPGWG-LGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAF 315 (409)
T ss_pred EccchhhcCCCccc-eEEEEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 99999999888754 5677773 3334322 2222211 122223333333333332 345566667777777
Q ss_pred HHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-----HHHHHHHcc-CCcceeecccCCcccceec
Q 019543 217 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVVET-TKYFSITVSFGSVKSLISM 290 (339)
Q Consensus 217 l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-----~~~~~~~~~-L~~~~i~v~~G~~~s~~~~ 290 (339)
+.+.|++++.......| ..|..+++.+... ....+++.. ++..|+.+..|..+
T Consensus 316 ~~~~L~~~~~~~~~~~p----------------~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f----- 374 (409)
T PLN00143 316 CYDKLKEIPCIMCPQKA----------------EGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTV----- 374 (409)
T ss_pred HHHHHhcCCCCCCCCCC----------------CeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCcccc-----
Confidence 88888776532111111 1355677777421 123455543 36678887766432
Q ss_pred cccccCCCCCHHHHHhCCCCCCeEEEEeccC--CHHHHHHHHHHHH
Q 019543 291 PCFMSHASIPVEVRQARGLTEDLVRISVGIE--DVNDLISDLDKAL 334 (339)
Q Consensus 291 p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e--~~~~li~~l~~al 334 (339)
| .++.+||+++.. ..++-+++|.+++
T Consensus 375 -----------------~-~~~~iRi~~~~~~~~l~~al~rl~~~l 402 (409)
T PLN00143 375 -----------------G-LKNWLRITFAVEQSSLEDGLGRLKSFC 402 (409)
T ss_pred -----------------C-CCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 1 236799999953 1223344444444
No 179
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.68 E-value=5.3e-15 Score=140.69 Aligned_cols=238 Identities=19% Similarity=0.182 Sum_probs=149.1
Q ss_pred ccCCCCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCC-CEEEEcCCCccchHHH---------------
Q 019543 49 YTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTG-EEIVAGDDLYGGTDRL--------------- 109 (339)
Q Consensus 49 y~r~~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~G-D~Vi~~~~~y~~~~~~--------------- 109 (339)
..++..+...+|++.+|+++|.+ +.++++++++++..++ .++.+| |.|+++++.|......
T Consensus 53 ~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 132 (364)
T PRK04781 53 TRRYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVD 132 (364)
T ss_pred hccCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC
Confidence 34445566789999999999864 4666666688887655 477898 7999988876432211
Q ss_pred ------------HH-------------------------HHHHHHHHH--cCCEEEEeCCcCCCCCcC-cc---c-CCCe
Q 019543 110 ------------LS-------------------------RKIAEMAHA--HGALLLVDNSIMSPVLSR-PL---E-LGAD 145 (339)
Q Consensus 110 ------------~~-------------------------~~I~~la~~--~g~~livD~a~a~g~~~~-~~---~-~~~D 145 (339)
.+ +++.++++. ++++||+||++....... .. . ..--
T Consensus 133 ~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~v 212 (364)
T PRK04781 133 GADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNL 212 (364)
T ss_pred CccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCE
Confidence 10 555555554 489999999997433211 11 1 1123
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch-----hhHHHHHHHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEF 220 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l-----~~~~~r~~~~~~~a~~l~~~ 220 (339)
|++.||||+++.+|. +.||+++++ ++++.++..+..+ .++.....++...| +....++++..++.+.+.+.
T Consensus 213 i~~~SfSK~~gl~Gl-RvGy~v~~~-~l~~~l~~~~~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~ 288 (364)
T PRK04781 213 AVLRTLSKAHALAAA-RIGSLIANA-ELIAVLRRCQAPY--PVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAA 288 (364)
T ss_pred EEEecChhhcccccc-eeeeeeCCH-HHHHHHHhccCCC--CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999987664 567887764 7888777665433 33443333333333 33445566677778889999
Q ss_pred HhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCC
Q 019543 221 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIP 300 (339)
Q Consensus 221 L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~ 300 (339)
|+.++++..+ +|. .|..+++.+++. .++.+.+...|+.+..|..+ +
T Consensus 289 L~~~~~~~~~-~p~----------------~g~f~~~~~~~~---~~~~~~l~~~gI~v~~~~~~-----~--------- 334 (364)
T PRK04781 289 LAQLPGVRRV-YPS----------------QGNFLLVRFDDA---EAAFQALLAAGVVVRDQRAA-----P--------- 334 (364)
T ss_pred HHhCCCCCeE-CCC----------------CCcEEEEEcCCH---HHHHHHHHHCCeEEeeCCCC-----C---------
Confidence 9887665323 342 466788877643 45666677778888765321 1
Q ss_pred HHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 301 VEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 301 ~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+ .++.+||+++..+. .+.|.+||+
T Consensus 335 -------~-~~~~~Ris~~~~~~---~~~l~~al~ 358 (364)
T PRK04781 335 -------R-LSDALRITLGTPEQ---NDRVLAALQ 358 (364)
T ss_pred -------C-CCCeEEEeCCCHHH---HHHHHHHHH
Confidence 1 23679999996443 224444444
No 180
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.67 E-value=1.3e-14 Score=139.50 Aligned_cols=190 Identities=16% Similarity=0.159 Sum_probs=120.8
Q ss_pred EEEcCcHHHHHHHHH-HhcCCCCE--EEEcCCCccchHHHHH--------------------------------------
Q 019543 73 ALCFTSGMAALAAVT-HLLGTGEE--IVAGDDLYGGTDRLLS-------------------------------------- 111 (339)
Q Consensus 73 ~l~~~sG~~A~~~il-~ll~~GD~--Vi~~~~~y~~~~~~~~-------------------------------------- 111 (339)
.++++++++|+..++ .+++|||+ |++++|.|........
T Consensus 93 i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~ 172 (393)
T TIGR03538 93 VLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVC 172 (393)
T ss_pred EEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEe
Confidence 455566689988655 47899996 8999988865432211
Q ss_pred ---------------HHHHHHHHHcCCEEEEeCCcCCCCCc---Ccc-------cCC-----CeEEEeccccccccCCCc
Q 019543 112 ---------------RKIAEMAHAHGALLLVDNSIMSPVLS---RPL-------ELG-----ADIVMHSATKFIAGHSDV 161 (339)
Q Consensus 112 ---------------~~I~~la~~~g~~livD~a~a~g~~~---~~~-------~~~-----~Di~~~S~sK~l~g~~~~ 161 (339)
++|+++|++||++||+||+|....+. .+. ..+ --|++.||||.++.+|.
T Consensus 173 ~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~Gl- 251 (393)
T TIGR03538 173 SPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGL- 251 (393)
T ss_pred CCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCccc-
Confidence 88999999999999999999743321 110 011 13889999999887774
Q ss_pred eEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCC
Q 019543 162 MAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 238 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~ 238 (339)
+.||+++++ ++++.+.......+...+......+...+. .+....+..+++.+.+.+.|+.+ +. +..|
T Consensus 252 RvG~~i~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~p----- 322 (393)
T TIGR03538 252 RSGFVAGDA-EILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV--LD-LELP----- 322 (393)
T ss_pred ceEEEecCH-HHHHHHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh--Cc-ccCC-----
Confidence 566887764 677877766654555556554444333332 23344555566667777777654 11 1122
Q ss_pred CchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcc
Q 019543 239 PGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVK 285 (339)
Q Consensus 239 ~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~ 285 (339)
..|..+++.+. ....+|++.| +..|+.+..|..+
T Consensus 323 -----------~gg~f~~~~~~--~~~~~~~~~l~~~~gV~v~pg~~f 357 (393)
T TIGR03538 323 -----------DAGFYLWPKVP--GDDEAFARALYEEENVTVLPGRFL 357 (393)
T ss_pred -----------CeeEEEEEECC--CCHHHHHHHHHHHCCEEEeCCccc
Confidence 13556777775 1235677766 4578888877643
No 181
>PRK06855 aminotransferase; Validated
Probab=99.67 E-value=2.4e-14 Score=139.23 Aligned_cols=172 Identities=19% Similarity=0.187 Sum_probs=105.5
Q ss_pred chHHHHHHHHHhHhC----CCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHH--HH-----------------
Q 019543 55 PTRDALESLLAKLDK----ADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRL--LS----------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g----~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~--~~----------------- 111 (339)
.+++.+.+.+++..| .+++++++++++|+..++.++.|||+|++++|.|++.... ..
T Consensus 77 ~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~ 156 (433)
T PRK06855 77 ETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYGLLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWY 156 (433)
T ss_pred HHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHHhcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCC
Confidence 344444444444334 3467777777999986667889999999999998754311 00
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C---cc----cCCCeE
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R---PL----ELGADI 146 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~---~~----~~~~Di 146 (339)
++|+++|++||++||+||+|+.-.+. . ++ .....|
T Consensus 157 ~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I 236 (433)
T PRK06855 157 PDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGI 236 (433)
T ss_pred CCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeE
Confidence 88999999999999999999754331 1 11 111248
Q ss_pred EEeccccccccCCCceEEEEEEcC----hhHHHHHHHHHHh--cCCCCChHHHHHHHhchh------hHHHHHHHHHHHH
Q 019543 147 VMHSATKFIAGHSDVMAGVLAVKG----ERLAKELYFLQNA--EGSGLAPFDCWICLRGVK------TMALRVEKQQDNA 214 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~~~----~~l~~~l~~~~~~--~~~~~~~~~a~~~~~~l~------~~~~r~~~~~~~a 214 (339)
+++||||.++.+|. +.||+++++ +.+...+...... .....+.+...++...++ .+.+.++...++.
T Consensus 237 ~~~S~SK~~~~pGl-RiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~ 315 (433)
T PRK06855 237 ALKGISKELPWPGS-RCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRS 315 (433)
T ss_pred EEecCccccCCCcc-eEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHH
Confidence 99999999987775 456777631 2222223322221 122334444333333332 2344455566777
Q ss_pred HHHHHHHhCCCCc
Q 019543 215 QKIAEFLASHPRV 227 (339)
Q Consensus 215 ~~l~~~L~~~~~i 227 (339)
+.+.+.|++++++
T Consensus 316 ~~~~~~L~~~~~~ 328 (433)
T PRK06855 316 NIAYEKLKDVPGL 328 (433)
T ss_pred HHHHHHHhcCCCe
Confidence 8888888876654
No 182
>PRK09265 aminotransferase AlaT; Validated
Probab=99.67 E-value=1.9e-14 Score=138.75 Aligned_cols=241 Identities=12% Similarity=0.052 Sum_probs=138.2
Q ss_pred HHHHHHHHHhHh------CC--CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 57 RDALESLLAKLD------KA--DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~------g~--~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
...|++.+++++ +. +++++++++++++..++ .+++|||+|+++++.|......+.
T Consensus 74 ~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~ 153 (404)
T PRK09265 74 LFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAG 153 (404)
T ss_pred cHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccC
Confidence 346777777766 32 34445554467776544 578999999999998875443221
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc-cC--C-CeE
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL-EL--G-ADI 146 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~-~~--~-~Di 146 (339)
++|+++|++||++||+||+|+.-.+.. .+ .. . .-+
T Consensus 154 ~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi 233 (404)
T PRK09265 154 WFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCV 233 (404)
T ss_pred CCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEE
Confidence 789999999999999999986432211 11 11 1 136
Q ss_pred EEeccccccccCCCceEEEEEE-cChhHHHHHH-HHH--HhcCCCCChHHHHHHHhchh---hHHH---HHHHHHHHHHH
Q 019543 147 VMHSATKFIAGHSDVMAGVLAV-KGERLAKELY-FLQ--NAEGSGLAPFDCWICLRGVK---TMAL---RVEKQQDNAQK 216 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~-~~~~l~~~l~-~~~--~~~~~~~~~~~a~~~~~~l~---~~~~---r~~~~~~~a~~ 216 (339)
+++||||.++.+|.+ .||+++ .++.+.+.+. ... .......+.....++...|. .... ..++..++.+.
T Consensus 234 ~~~S~SK~~~~pGlR-iG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~ 312 (404)
T PRK09265 234 TFNGLSKAYRVAGFR-VGWMVLSGPKKHAKGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDR 312 (404)
T ss_pred EEecchhhccCcccc-eEEEEEeCchHHHHHHHHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Confidence 789999999877755 456664 3333322221 111 11223344433333333222 2211 12345566777
Q ss_pred HHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-----HHHHHHHccCCcceeecccCCcccceecc
Q 019543 217 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVVETTKYFSITVSFGSVKSLISMP 291 (339)
Q Consensus 217 l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-----~~~~~~~~~L~~~~i~v~~G~~~s~~~~p 291 (339)
+.+.|+.+++++ +..| ..|..+++.+.+. .....+.+.+...|+.+..|..+. +
T Consensus 313 ~~~~L~~~~~~~-~~~p----------------~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~----~ 371 (404)
T PRK09265 313 AWELLNAIPGVS-CVKP----------------KGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFN----W 371 (404)
T ss_pred HHHHHhcCCCCc-ccCC----------------CcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhC----C
Confidence 888888776543 2222 1345666666432 122345555667788877664321 0
Q ss_pred ccccCCCCCHHHHHhCCCCCCeEEEEecc--CCHHHHHHHHHHHHhc
Q 019543 292 CFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 336 (339)
Q Consensus 292 ~~~~h~~~~~~~~~~~g~~~~~lRisvg~--e~~~~li~~l~~al~~ 336 (339)
..++.+|++++. |+.++.++.|.+++++
T Consensus 372 -----------------~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 372 -----------------PEPDHFRIVTLPRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred -----------------CCCCeEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 024679999974 3345556677766654
No 183
>PRK08354 putative aminotransferase; Provisional
Probab=99.67 E-value=8.5e-15 Score=136.32 Aligned_cols=111 Identities=18% Similarity=0.140 Sum_probs=84.5
Q ss_pred hHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH------------------------
Q 019543 56 TRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS------------------------ 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~------------------------ 111 (339)
....|++++++++|. +.++++++++|+..++.++.+||+|++++|.|+.....++
T Consensus 41 ~~~~l~~~ia~~~~~-~I~vt~G~~~al~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~ 119 (311)
T PRK08354 41 YYEWLEEEFSKLFGE-PIVITAGITEALYLIGILALRDRKVIIPRHTYGEYERVARFFAARIIKGPNDPEKLEELVERNS 119 (311)
T ss_pred ChHHHHHHHHHHHCC-CEEECCCHHHHHHHHHHhhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecCCCHHHHHHhhcCCC
Confidence 456799999999984 5777777789988665656699999999999987654333
Q ss_pred --------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccccCCCceEEEEEE
Q 019543 112 --------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAV 168 (339)
Q Consensus 112 --------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~ 168 (339)
++|+++|++||+++|+||+|...... ......--+++.||||.++.+|.+ .|++++
T Consensus 120 ~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~GlR-iG~~v~ 196 (311)
T PRK08354 120 VVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPGIR-VGYVKG 196 (311)
T ss_pred EEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCccce-eeeeee
Confidence 88889999999999999999654332 111223358999999999977754 567776
No 184
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=1.1e-14 Score=138.75 Aligned_cols=203 Identities=17% Similarity=0.159 Sum_probs=128.2
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHHH-hcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAVTH-LLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il~-ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
+....|++.+|++++.+ +.++++++.+++..++. +++|||+|+++++.|+.....+.
T Consensus 67 ~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~~~ 146 (369)
T PRK08153 67 PENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDREDLDA 146 (369)
T ss_pred CccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCCCCHHH
Confidence 34679999999999853 44444445677776554 68999999999998875432211
Q ss_pred ----------------------------HHHHHHHHH--cCCEEEEeCCcCCCCCcC---ccc--CCCeEEEeccccccc
Q 019543 112 ----------------------------RKIAEMAHA--HGALLLVDNSIMSPVLSR---PLE--LGADIVMHSATKFIA 156 (339)
Q Consensus 112 ----------------------------~~I~~la~~--~g~~livD~a~a~g~~~~---~~~--~~~Di~~~S~sK~l~ 156 (339)
+++.++++. +|++||+||+|+...... .+. ..-.+++.||||.++
T Consensus 147 l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g 226 (369)
T PRK08153 147 LLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYG 226 (369)
T ss_pred HHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhcc
Confidence 444444443 399999999986432211 111 112488999999998
Q ss_pred cCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceEEecC
Q 019543 157 GHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYA 233 (339)
Q Consensus 157 g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p 233 (339)
.+|. +.||++++ +++++.+...... ..+++...+++...|+. +....++.+++.+.+.+.|+.. ++. .+|
T Consensus 227 ~~Gl-RiG~~v~~-~~~~~~l~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~--~~p 299 (369)
T PRK08153 227 LAGA-RVGYAIGA-PGTIKAFDKVRNH--FGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLT--PLP 299 (369)
T ss_pred Ccch-heeeeecC-HHHHHHHHHhhcC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCc--cCC
Confidence 7664 45788876 4677777665533 34566665555554432 3333445556677777777765 332 122
Q ss_pred CCCCCCchHhHhhhcCCCcceEEEeeC-CHHHHHHHHccCCcceeecc
Q 019543 234 GLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFSITVS 280 (339)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~ivs~~~~-~~~~~~~~~~~L~~~~i~v~ 280 (339)
+.+..+++.++ +.+.+.++.+.|...|+.++
T Consensus 300 ----------------~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~ 331 (369)
T PRK08153 300 ----------------SATNFVAIDCGRDGAFARAVLDGLIARDIFVR 331 (369)
T ss_pred ----------------CcCcEEEEECCCCcccHHHHHHHHHHCCeEEe
Confidence 13556777664 23456788888877788764
No 185
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.67 E-value=7.4e-15 Score=138.37 Aligned_cols=232 Identities=17% Similarity=0.119 Sum_probs=146.5
Q ss_pred ccCCCCchHHHHHHHHHhHhCCC---eEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 49 YTRSGNPTRDALESLLAKLDKAD---RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 49 y~r~~~~~~~~le~~la~~~g~~---~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
+.|+-.+. .+|++.+|+++|.. ++++++++++++..+..++++|| |+++.|+|......++
T Consensus 48 ~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~~ 125 (339)
T PRK06959 48 WRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAAD 125 (339)
T ss_pred HHhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHHhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccch
Confidence 34444555 89999999999863 45555555788876666778888 7778899887654333
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcc----cCCCeEEEeccccccccCCC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPL----ELGADIVMHSATKFIAGHSD 160 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~----~~~~Di~~~S~sK~l~g~~~ 160 (339)
++|++.|++++.++|+||+|........+ ...--|++.||||.+|.+|.
T Consensus 126 ~~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~Gl 205 (339)
T PRK06959 126 TLPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGV 205 (339)
T ss_pred hccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcch
Confidence 55556677889999999999754321111 11113888999999987664
Q ss_pred ceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCC
Q 019543 161 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 237 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~ 237 (339)
+.||++++ +++++.++..+.. +.++.....++...|+ .....+++..++.+++.+.|+++ +++. ++
T Consensus 206 -RiGy~v~~-~~li~~l~~~~~~--~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~--~~---- 274 (339)
T PRK06959 206 -RAGFVLAA-PALLAALRDALGA--WTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAV--HA---- 274 (339)
T ss_pred -heEEEecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCc--cC----
Confidence 56788876 4788888776532 3345544433433332 23444566667788888888876 2211 01
Q ss_pred CCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEE
Q 019543 238 HPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 317 (339)
Q Consensus 238 ~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRis 317 (339)
.+..+++.+. .+.++.+.|...|+.++. + . ..+.+|||
T Consensus 275 -------------~~~f~~~~~~---~~~~l~~~l~~~GI~vr~------~--~------------------~~~~lRis 312 (339)
T PRK06959 275 -------------TPLFSWTDDP---RAAALHAALARRGIWTRY------F--A------------------PPPSVRFG 312 (339)
T ss_pred -------------cceEEEEeCC---CHHHHHHHHHhCCeEEEE------C--C------------------CCCeEEEE
Confidence 2334456554 245677888777887751 0 0 12479999
Q ss_pred ec-c-CCHHHHHHHHHHHHh
Q 019543 318 VG-I-EDVNDLISDLDKALR 335 (339)
Q Consensus 318 vg-~-e~~~~li~~l~~al~ 335 (339)
++ . ++.+.+++.|.+.++
T Consensus 313 i~~~~~e~~~l~~al~~~~~ 332 (339)
T PRK06959 313 LPADEAEWQRLEDALAECVP 332 (339)
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 94 3 444666666655544
No 186
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.67 E-value=4.4e-15 Score=138.30 Aligned_cols=264 Identities=20% Similarity=0.191 Sum_probs=169.4
Q ss_pred CcccCCCCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHH-HHH--h--c--CCCCEEEEcCCCccchHHHHH------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAA-VTH--L--L--GTGEEIVAGDDLYGGTDRLLS------ 111 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~-il~--l--l--~~GD~Vi~~~~~y~~~~~~~~------ 111 (339)
+.|+|......++.++.+|++.|++ +.+++++||.++++ +.. . - +.|-+||++.-..+.....++
T Consensus 36 H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g 115 (386)
T COG1104 36 HSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQG 115 (386)
T ss_pred hHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcC
Confidence 4566666778899999999999975 34445555998874 443 2 1 247899998766555432221
Q ss_pred ---------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCe
Q 019543 112 ---------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGAD 145 (339)
Q Consensus 112 ---------------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~D 145 (339)
++|.++|+++|+++.+|.+++.|-. .+....++|
T Consensus 116 ~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD 195 (386)
T COG1104 116 FEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEELGVD 195 (386)
T ss_pred CeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccccCcc
Confidence 9999999999999999999999854 344455799
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHH----HHh-cCCCCChHHHH---HHHhchhhHHHHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----QNA-EGSGLAPFDCW---ICLRGVKTMALRVEKQQDNAQKI 217 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~----~~~-~~~~~~~~~a~---~~~~~l~~~~~r~~~~~~~a~~l 217 (339)
++.+|.+|..|.-| .|+++.++......+..- +.. .|+---|..+. ++....+.++...++..+..+++
T Consensus 196 ~ls~SaHK~~GpkG---iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l 272 (386)
T COG1104 196 LLSFSAHKFGGPKG---IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRL 272 (386)
T ss_pred eEEeehhhccCCCc---eEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999877543 366666542211111100 000 12211122222 23334566777777777788888
Q ss_pred HHHHhCC-CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccC
Q 019543 218 AEFLASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH 296 (339)
Q Consensus 218 ~~~L~~~-~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h 296 (339)
.+.|.+. |.+.....+ . ..-.+++.|.+.+.+ ...++-.|...||.+|.|...+--..
T Consensus 273 ~~~l~~~~p~~~~~g~~---~-----------~rlP~~~~~~f~gv~-gE~ll~~L~~~gI~vStGSACsS~~~------ 331 (386)
T COG1104 273 EDGLLEIIPDVYLNGDD---E-----------PRLPNILNFSFPGVE-GESLLLALDLAGIAVSTGSACSSGSL------ 331 (386)
T ss_pred HHHHHhcCCcEEEcCCc---c-----------cCCCCeEEEEeCCCc-HHHHHHhccccCeEEeccccccCCCC------
Confidence 8888865 654321111 0 112357777775432 34566678888999999865332211
Q ss_pred CCCCHHHHHhCCCC----CCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 297 ASIPVEVRQARGLT----EDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 297 ~~~~~~~~~~~g~~----~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.|-.....+|++ .+.||||+|..++++.++.+.+++++
T Consensus 332 --~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~ 373 (386)
T COG1104 332 --EPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKE 373 (386)
T ss_pred --CccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHH
Confidence 122456677875 36799999999999888888887764
No 187
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.67 E-value=1.1e-14 Score=138.55 Aligned_cols=210 Identities=16% Similarity=0.159 Sum_probs=132.0
Q ss_pred chHHHHHHHHHhHhCCC---e-EEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchH--HHHH----------------
Q 019543 55 PTRDALESLLAKLDKAD---R-ALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTD--RLLS---------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~-~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~--~~~~---------------- 111 (339)
...+++++.+++++|++ . .++++||+.++.. +.+++.+||+|++..+.|.+.. ...+
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~ 116 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGEDEP 116 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCCCC
Confidence 36789999999999974 2 4567888999985 4558889999988777655432 1111
Q ss_pred ----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccc
Q 019543 112 ----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 156 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~ 156 (339)
++|.++|+++|+++++|++++.|... +...+++|++++|++|++.
T Consensus 117 ~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~ 196 (368)
T PRK13479 117 PDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIE 196 (368)
T ss_pred CCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccccc
Confidence 89999999999999999998877532 2234578999999999987
Q ss_pred cCCCceEEEEEEcChhHHHHHHHHHHh--------------cC---CCCChHHHHH---HHhch-h--hHHHHHHHHHHH
Q 019543 157 GHSDVMAGVLAVKGERLAKELYFLQNA--------------EG---SGLAPFDCWI---CLRGV-K--TMALRVEKQQDN 213 (339)
Q Consensus 157 g~~~~~gG~v~~~~~~l~~~l~~~~~~--------------~~---~~~~~~~a~~---~~~~l-~--~~~~r~~~~~~~ 213 (339)
|+.+ .|++++++ ++.+.+...... .+ .+.+....+. ++..+ + .++.+.++..++
T Consensus 197 g~~G--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~ 273 (368)
T PRK13479 197 GVPG--FGFVIARR-SELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANN 273 (368)
T ss_pred cCCC--ceEEEECH-HHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence 6543 37888875 555554431100 00 1222222111 22222 1 134556677778
Q ss_pred HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccCCcceeecccC
Q 019543 214 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFG 282 (339)
Q Consensus 214 a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L~~~~i~v~~G 282 (339)
++++.+.|+++ ++..+ .+. .+ + ...++.|.+... ....++.+.|...|+.++.|
T Consensus 274 ~~~l~~~L~~~-g~~~~-~~~-----~~-------~-~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g 329 (368)
T PRK13479 274 QRTLVAGMRAL-GFEPL-LDA-----EI-------Q-SPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPG 329 (368)
T ss_pred HHHHHHHHHHc-CCccc-CCc-----hh-------c-CceEEEEECCCCCCcCHHHHHHHHHHCCEEEecC
Confidence 88888888876 33211 110 00 1 123566655322 23457788887778887644
No 188
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.67 E-value=9.8e-15 Score=133.35 Aligned_cols=210 Identities=22% Similarity=0.284 Sum_probs=133.1
Q ss_pred CCCcccCCCCchHHHHHHHHHhHhCCCeEEE---cCcHHHHHHH-HHHhcCCCCEEEEc-CCCccchHHHHH--------
Q 019543 45 GPYDYTRSGNPTRDALESLLAKLDKADRALC---FTSGMAALAA-VTHLLGTGEEIVAG-DDLYGGTDRLLS-------- 111 (339)
Q Consensus 45 ~~~~y~r~~~~~~~~le~~la~~~g~~~~l~---~~sG~~A~~~-il~ll~~GD~Vi~~-~~~y~~~~~~~~-------- 111 (339)
.+|.|+ ..-++.||+-+|+.||+|++++ |.|||+|+.+ +..+++|||+++.- ..-|+....++.
T Consensus 47 TGYGY~---D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GS 123 (403)
T PF06838_consen 47 TGYGYD---DIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGS 123 (403)
T ss_dssp -TT-TT----HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSS
T ss_pred CcCCCC---CccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCC
Confidence 445555 4578999999999999999998 7899999985 56799999999863 344554443321
Q ss_pred ------------------------------------------------------HHHHHHHHHc--CCEEEEeCCcCCCC
Q 019543 112 ------------------------------------------------------RKIAEMAHAH--GALLLVDNSIMSPV 135 (339)
Q Consensus 112 ------------------------------------------------------~~I~~la~~~--g~~livD~a~a~g~ 135 (339)
+++++.+|+. +++++|||+|+..+
T Consensus 124 L~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFv 203 (403)
T PF06838_consen 124 LKEFGIKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFV 203 (403)
T ss_dssp TGGGT-EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTT
T ss_pred hHHhCceeEEEeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceec
Confidence 5666666664 78999999999776
Q ss_pred C-cCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh------cCCCCChHHHHHHHhchhhHHHHHH
Q 019543 136 L-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA------EGSGLAPFDCWICLRGVKTMALRVE 208 (339)
Q Consensus 136 ~-~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~------~~~~~~~~~a~~~~~~l~~~~~r~~ 208 (339)
. ..|...|+|++++|+-|..||.-...||+|+++ ++++++....... .|.++.. .....++|=-.+.-..
T Consensus 204 E~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr-~~lVe~~a~RLTaPGiG~e~G~t~~~--~R~~~QGlFlAP~vV~ 280 (403)
T PF06838_consen 204 ETQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGR-KDLVERAAYRLTAPGIGKEVGATLGT--NRLMFQGLFLAPHVVG 280 (403)
T ss_dssp SSS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEES-HHHHHHHHHHHS-TTTGGGSS--TTT--HHHHHHHHHHHHHHHH
T ss_pred cccCccccchhheeccceeCCCCCccCcCCEEech-HHHHHHHHhhhcCCccccccccCcch--HHHHHhHHhhchHHHH
Confidence 5 467888999999999999998877789999987 4788877654321 2222221 2234444444455556
Q ss_pred HHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCc
Q 019543 209 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY 274 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~ 274 (339)
+..+.+...+..++.+. .+ | .|... .+ + .--|.++.+++++...+|++.++.
T Consensus 281 eAlKgaif~A~~fe~lG-~~-v-~P~~~-~~---------R-~DiIQai~l~~~e~l~~FC~~iQ~ 332 (403)
T PF06838_consen 281 EALKGAIFAAALFEKLG-FE-V-SPKPD-DP---------R-SDIIQAIELGSPEKLIAFCQGIQA 332 (403)
T ss_dssp HHHHHHHHHHHHHHHTT--E-E-ES-TT-S------------SSS-EEEE-SSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-Cc-C-CCCCC-CC---------C-CceEEEEECCCHHHHHHHHHHHHh
Confidence 66666777777777664 22 2 23211 11 1 234778889999999999998765
No 189
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=7.5e-15 Score=139.18 Aligned_cols=232 Identities=17% Similarity=0.170 Sum_probs=148.3
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcH-HHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSG-MAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG-~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
+...+|++.+++++|.. ..+++++| ++++..++ .+++|||+|+++++.|.......+
T Consensus 63 ~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~ 142 (356)
T PRK04870 63 PRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDL 142 (356)
T ss_pred CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCH
Confidence 44678999999999853 24555555 67777655 477999999999998876543322
Q ss_pred ------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---cc-cCCCeEEEecccccccc
Q 019543 112 ------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---PL-ELGADIVMHSATKFIAG 157 (339)
Q Consensus 112 ------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~~-~~~~Di~~~S~sK~l~g 157 (339)
+++.++++..++++|+|+++....... .+ ...-.+++.|||| ++.
T Consensus 143 ~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~ 221 (356)
T PRK04870 143 PAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGL 221 (356)
T ss_pred HHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhh
Confidence 666666666688999999985322111 11 1123588999999 776
Q ss_pred CCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHH---HhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCC
Q 019543 158 HSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC---LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 234 (339)
Q Consensus 158 ~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~---~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~ 234 (339)
+|. +.|++++++ ++++.++..+. .+.++....+++ +...+.++..+++..++.+.+.+.|+.++++. + +|.
T Consensus 222 ~Gl-RiG~~i~~~-~~i~~~~~~~~--~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~ 295 (356)
T PRK04870 222 AGL-RLGYLAGHP-AWIAELDKVRP--PYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVT-V-FPS 295 (356)
T ss_pred HHH-hhhhhhCCH-HHHHHHHHccC--CCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCC
Confidence 664 456887764 67777665442 233444433332 23333455556677788888888898877653 2 331
Q ss_pred CCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeE
Q 019543 235 LPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 314 (339)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~l 314 (339)
.++.+++.+++ ..++.+.|++.|+.+..|..+. + ..++.+
T Consensus 296 ----------------~~~~~~~~~~~---~~~~~~~l~~~gI~v~~~~~f~----~-----------------~~~~~i 335 (356)
T PRK04870 296 ----------------AANFILVRVPD---AAAVFDGLKTRGVLVKNLSGMH----P-----------------LLANCL 335 (356)
T ss_pred ----------------CCeEEEEECCC---HHHHHHHHHHCCEEEEECCCCC----C-----------------CCCCeE
Confidence 35678888763 3456777777888887554221 1 124689
Q ss_pred EEEeccCCHHHHHHHHHHHHhc
Q 019543 315 RISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 315 Risvg~e~~~~li~~l~~al~~ 336 (339)
|||++. .+..+.|.+||++
T Consensus 336 Ris~~~---~~~~~~l~~al~~ 354 (356)
T PRK04870 336 RVTVGT---PEENAQFLAALKA 354 (356)
T ss_pred EEeCCC---HHHHHHHHHHHHH
Confidence 999995 3344567777664
No 190
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.66 E-value=5.1e-14 Score=138.76 Aligned_cols=170 Identities=12% Similarity=0.127 Sum_probs=106.3
Q ss_pred HHHHHHHHHhHh----C----CCeEEEcCcHHHHHHHHH-Hhc-CCCCEEEEcCCCccchHHHHH---------------
Q 019543 57 RDALESLLAKLD----K----ADRALCFTSGMAALAAVT-HLL-GTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~----g----~~~~l~~~sG~~A~~~il-~ll-~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
..+|++.+++++ | .+++++++++++|+..++ .++ +|||+|++++|.|......++
T Consensus 117 ~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~ 196 (481)
T PTZ00377 117 YPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEK 196 (481)
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEecccc
Confidence 345555555554 3 346777777789998655 466 799999999998865432211
Q ss_pred --------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-c-Ccc-----
Q 019543 112 --------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-S-RPL----- 140 (339)
Q Consensus 112 --------------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~-~~~----- 140 (339)
++|+++|++||++||+||+|....+ . .+.
T Consensus 197 ~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~ 276 (481)
T PTZ00377 197 GWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRK 276 (481)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHH
Confidence 8899999999999999999975332 1 110
Q ss_pred ---cCC-------CeEEEecccccc-ccCCCceEEEEEE--cChhHHHHHHHHHHhcCCCCChHHHHHHHhchh------
Q 019543 141 ---ELG-------ADIVMHSATKFI-AGHSDVMAGVLAV--KGERLAKELYFLQNAEGSGLAPFDCWICLRGVK------ 201 (339)
Q Consensus 141 ---~~~-------~Di~~~S~sK~l-~g~~~~~gG~v~~--~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~------ 201 (339)
... --|+++||||.+ +.+|. +.||+++ .++++++.+...... ..+.+.....++...++
T Consensus 277 ~~~~l~~~~~~~~~vi~~~S~SK~~~~~~Gl-RiG~~~~~~~p~~li~~l~~~~~~-~~~~~~~~Q~a~~~~l~~~~~~~ 354 (481)
T PTZ00377 277 VLLELPAEYNTDVELVSFHSTSKGIIGECGR-RGGYFELTNIPPEVREQIYKLASI-NLCSNVVGQLMTGLMCNPPREGD 354 (481)
T ss_pred HHHhhcccccCCeEEEEEecCCcccccCCcC-ceEEEEEeCCCHHHHHHHHHHhhe-ecCCChHHHHHHHHHhCCCCCCc
Confidence 111 127889999985 54554 5667765 245788888776542 22344433333322221
Q ss_pred ----hH----HHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 202 ----TM----ALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 202 ----~~----~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
.. ....++..++.+.+.+.|+.+++++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~ 389 (481)
T PTZ00377 355 ASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS 389 (481)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 12 1222234667778888998887654
No 191
>PRK05839 hypothetical protein; Provisional
Probab=99.65 E-value=2.3e-14 Score=136.85 Aligned_cols=219 Identities=15% Similarity=0.096 Sum_probs=132.3
Q ss_pred chHHHHHHHHHhHhC----CCeEEEcCcHHHHHHHHHH-hc--CCCCEEEEcCCCccchHHHHH----------------
Q 019543 55 PTRDALESLLAKLDK----ADRALCFTSGMAALAAVTH-LL--GTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g----~~~~l~~~sG~~A~~~il~-ll--~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
.+++++.+.+++.+| .+++++++++++|+..++. ++ ++||.|+++.|.|......+.
T Consensus 64 ~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~ 143 (374)
T PRK05839 64 SLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKEND 143 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccC
Confidence 455666666666655 3456666666888875543 43 589999999998876543222
Q ss_pred ----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc----cc---------CCC
Q 019543 112 ----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP----LE---------LGA 144 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~----~~---------~~~ 144 (339)
++|+++|++||++||+||+|+.-....+ .. ..-
T Consensus 144 ~~~d~~~~~~~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~ 223 (374)
T PRK05839 144 FTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKN 223 (374)
T ss_pred CcCCcchhhhccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCc
Confidence 8899999999999999999874221111 11 012
Q ss_pred eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch---hhHHHHHHHHHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l---~~~~~r~~~~~~~a~~l~~~L 221 (339)
-|++.||||.++.+| .+.||++++ +++.+.++......+...+......+...+ +.++...++..++.+.+.+.|
T Consensus 224 vi~~~SfSK~~~~~G-lRiG~ii~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 301 (374)
T PRK05839 224 VLVINSISKRSSAPG-LRSGFIAGD-ASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL 301 (374)
T ss_pred EEEEeccccccCCcc-ceeEEEecC-HHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc
Confidence 388899999998777 456788776 467787776654444444433322222222 223333444455555555544
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC-cceeecccCCcccceeccccccCCCCC
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIP 300 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~~h~~~~ 300 (339)
. +. .| ..|..+++.+.+. .+|++.|. ..|+.+..|..+. .+
T Consensus 302 ~----~~---~p----------------~gg~fi~~~~~~~---~~~~~~l~~~~gi~v~pg~~f~---~~--------- 343 (374)
T PRK05839 302 G----IT---IP----------------PATFYVWLPVDND---EEFTKKLYQNEGIKVLPGSFLG---RN--------- 343 (374)
T ss_pred C----CC---CC----------------CeeEEEEEeCCCh---HHHHHHHHHHCCEEEeCchhhC---CC---------
Confidence 2 11 22 1356777777533 45666664 4788877664321 00
Q ss_pred HHHHHhCCCCCCeEEEEecc
Q 019543 301 VEVRQARGLTEDLVRISVGI 320 (339)
Q Consensus 301 ~~~~~~~g~~~~~lRisvg~ 320 (339)
+..++.+|||++.
T Consensus 344 -------~~~~~~iRis~~~ 356 (374)
T PRK05839 344 -------GIGKGYVRIALVY 356 (374)
T ss_pred -------CCCCCeEEEEecC
Confidence 1135789999985
No 192
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.65 E-value=4e-15 Score=140.09 Aligned_cols=164 Identities=16% Similarity=0.144 Sum_probs=108.0
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcCc-c-----c-CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhc
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSRP-L-----E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE 184 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~~-~-----~-~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~ 184 (339)
++|+++|++||+++++|++|+.+..... . . .++|++++|++|+++++. ..|+++.+
T Consensus 168 ~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~--g~g~~~~~--------------- 230 (345)
T cd06450 168 EEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPL--GCSAVLVR--------------- 230 (345)
T ss_pred HHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCc--chHHHHHH---------------
Confidence 9999999999999999999987653211 0 1 267999999999987553 24555433
Q ss_pred CCCCChHHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-
Q 019543 185 GSGLAPFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS- 261 (339)
Q Consensus 185 ~~~~~~~~a~~~~~~l--~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~- 261 (339)
....+.++..+ +.++.++++..++++++.+.|++++++..+..| .++++.|.+.+
T Consensus 231 -----~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-----------------~~~iv~f~~~~~ 288 (345)
T cd06450 231 -----ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEP-----------------NLSLVCFRLKPS 288 (345)
T ss_pred -----HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------ceeEEEEEECCc
Confidence 11112222222 345667778888999999999998876533211 35789998765
Q ss_pred ---HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCC-HHHHHHHHHHHHhcC
Q 019543 262 ---LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED-VNDLISDLDKALRTG 337 (339)
Q Consensus 262 ---~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~-~~~li~~l~~al~~~ 337 (339)
.....++.+.|...|+.+..+. ..+ .+..+|+|++..+ +++.++.+.++|+++
T Consensus 289 ~~~~~~~~~i~~~L~~~g~~~~~~~-----~~~------------------~~~~lRis~~~~~~t~~di~~l~~~l~~~ 345 (345)
T cd06450 289 VKLDELNYDLSDRLNERGGWHVPAT-----TLG------------------GPNVLRFVVTNPLTTRDDADALLEDIERA 345 (345)
T ss_pred chhhHHHHHHHHHHHhcCCEEEEee-----EEC------------------CeEEEEEEecCCCCCHHHHHHHHHHHHhC
Confidence 2345677777766543221110 000 2467999999875 888889999988763
No 193
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.65 E-value=2.4e-14 Score=139.69 Aligned_cols=174 Identities=21% Similarity=0.191 Sum_probs=116.9
Q ss_pred cccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHH------------------
Q 019543 48 DYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDR------------------ 108 (339)
Q Consensus 48 ~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~------------------ 108 (339)
.|+ .++...+||++++++++.+++++++||++|+.+ +.++++||| |+++++.|..+..
T Consensus 73 ~Y~--~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~ 149 (460)
T PRK13238 73 AYA--GSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEAL 149 (460)
T ss_pred ccC--CCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccc
Confidence 355 567788999999999999999999999999985 445899999 8887765432210
Q ss_pred -------------------HH------H-----------------------HHHHHHHHHcCCEEEEeCCcCCC------
Q 019543 109 -------------------LL------S-----------------------RKIAEMAHAHGALLLVDNSIMSP------ 134 (339)
Q Consensus 109 -------------------~~------~-----------------------~~I~~la~~~g~~livD~a~a~g------ 134 (339)
.+ + ++|.++|++||++||+|+++..+
T Consensus 150 ~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~ 229 (460)
T PRK13238 150 DTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIK 229 (460)
T ss_pred cccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhh
Confidence 00 0 68999999999999999988431
Q ss_pred -----CCcCcc-------cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH----h-cCCCCChHHHHHHH
Q 019543 135 -----VLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN----A-EGSGLAPFDCWICL 197 (339)
Q Consensus 135 -----~~~~~~-------~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~----~-~~~~~~~~~a~~~~ 197 (339)
+....+ ...+|+++.|..|.+.++ .||+++++++++.++++.... . +-.+++......+.
T Consensus 230 ~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~---~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala 306 (460)
T PRK13238 230 QREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVN---IGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALA 306 (460)
T ss_pred hccccccCCCHHHHhhhhcccCcEEEEecccCCCCc---ceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHH
Confidence 111111 124699999999987643 489999887678887766531 1 11233444233333
Q ss_pred hchhh-H-HHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 198 RGVKT-M-ALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 198 ~~l~~-~-~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
.+|+. . +...+.+.++.++|.+.|++. ++.
T Consensus 307 ~~l~e~~~~~~~~~~~~~~~~l~~~L~~~-G~~ 338 (460)
T PRK13238 307 VGLYEGMDEDYLAYRIGQVEYLGEGLEEA-GVP 338 (460)
T ss_pred hhHHHhhChHHHHHHHHHHHHHHHHHHHC-CCC
Confidence 33333 1 234444455678899999875 554
No 194
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=1.5e-14 Score=137.09 Aligned_cols=237 Identities=14% Similarity=0.094 Sum_probs=149.2
Q ss_pred ccCCCCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHHH-hcCCC-CEEEEcCCCccchHHHHH-------------
Q 019543 49 YTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVTH-LLGTG-EEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 49 y~r~~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il~-ll~~G-D~Vi~~~~~y~~~~~~~~------------- 111 (339)
+.|+..+...+|++.+|+++|.+ +.++++++++++..++. +++|| |+|++++|.|.......+
T Consensus 54 ~~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~ 133 (354)
T PRK04635 54 LNRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA 133 (354)
T ss_pred hccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC
Confidence 34444556789999999999864 56666666888886554 77898 999999998875432221
Q ss_pred ---------------------------------HHHHHHHHHc-CCEEEEeCCcCCCCCcCc-c---c-CCCeEEEeccc
Q 019543 112 ---------------------------------RKIAEMAHAH-GALLLVDNSIMSPVLSRP-L---E-LGADIVMHSAT 152 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~-g~~livD~a~a~g~~~~~-~---~-~~~Di~~~S~s 152 (339)
+++.++++.. +++||+|++|........ . . ..--+++.|||
T Consensus 134 ~~~~~~~~l~~~~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~S 213 (354)
T PRK04635 134 DYQLPLDYIEQLDGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLS 213 (354)
T ss_pred CCCCCHHHHHhccCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechH
Confidence 7777887763 799999999864321111 1 1 11137889999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhc-----hhhHHHHHHHHHHHHHHHHHHHhCCCCc
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG-----VKTMALRVEKQQDNAQKIAEFLASHPRV 227 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~-----l~~~~~r~~~~~~~a~~l~~~L~~~~~i 227 (339)
|+++.+|. +.|++++++ ++++.+..... ...++......+... .+.+..+.++..++.+++.+.|++++++
T Consensus 214 K~~~l~Gl-RlG~~i~~~-~~~~~l~~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 289 (354)
T PRK04635 214 KAFALAGA-RCGFTLANE-ELIEILMRVIA--PYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGA 289 (354)
T ss_pred HHhhhhHH-HHhhhhCCH-HHHHHHHhhcC--CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99986664 456877764 67777654332 233343332223222 3344555666777788888999887654
Q ss_pred eEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhC
Q 019543 228 KKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQAR 307 (339)
Q Consensus 228 ~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~ 307 (339)
+ + +|. .+..+++.+.+. .++.+.|.+.|+.++.+.. +
T Consensus 290 ~-~-~~~----------------~g~f~~~~~~~~---~~~~~~l~~~gv~v~~~~~------~---------------- 326 (354)
T PRK04635 290 K-V-LEG----------------NGNYVLAKFDDV---DAVFKALWDAGIVARAYKD------P---------------- 326 (354)
T ss_pred e-E-CCC----------------CCcEEEEECCCH---HHHHHHHHHCCEEEEECCC------C----------------
Confidence 3 2 331 345666666533 3556666677887753210 0
Q ss_pred CCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 308 GLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 308 g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
-.++.+|||++. ++.++.|.++|++
T Consensus 327 -~~~~~lRis~~~---~e~~~~l~~al~~ 351 (354)
T PRK04635 327 -RLANCIRFSFSN---RAETDKLIGLIRN 351 (354)
T ss_pred -CCCCeEEEEeCC---HHHHHHHHHHHHH
Confidence 023679999984 3455677777764
No 195
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.64 E-value=3.8e-14 Score=134.58 Aligned_cols=232 Identities=15% Similarity=0.101 Sum_probs=146.5
Q ss_pred chHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH---------------------
Q 019543 55 PTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS--------------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~--------------------- 111 (339)
+...+|++.+|++++. +++++++++++++..++..+.+||.|++++|.|......++
T Consensus 57 ~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 136 (360)
T PRK07392 57 PDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGRELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLT 136 (360)
T ss_pred cCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhCCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccc
Confidence 3456899999999864 45777777789998766545688999999998865442221
Q ss_pred -------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c-c---c-CCCeEEEeccc
Q 019543 112 -------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P-L---E-LGADIVMHSAT 152 (339)
Q Consensus 112 -------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~-~---~-~~~Di~~~S~s 152 (339)
++|.++++++++ +|+||+|....... . . . ..--|++.|||
T Consensus 137 ~~~~~~~~~~~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~S 215 (360)
T PRK07392 137 LRLQTLPPQLTPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLT 215 (360)
T ss_pred cCHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEech
Confidence 889999999986 66699986432211 1 1 1 11238889999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
|.++.+|. +.||+++++ ++++.+...+ .....+.+...++...++. .....+...++.+++.+.|+.++++..
T Consensus 216 K~~~l~Gl-RiG~~v~~~-~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 291 (360)
T PRK07392 216 KFYSLPGL-RLGYAIAHP-DRLQRWQQWR--DPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTP 291 (360)
T ss_pred hhhcCCch-heeeeeCCH-HHHHHHHhhC--CCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEE
Confidence 99997664 567887764 6666665433 2345566655555444433 222234455667788888887766532
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcccceeccccccCCCCCHHHHHhCC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 308 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g 308 (339)
+| +.+..+++.+.. ...++++.+ +..|+.+..|..+. .
T Consensus 292 --~~----------------~~~~fl~~~~~~--~~~~l~~~ll~~~gv~v~pg~~f~----~----------------- 330 (360)
T PRK07392 292 --LP----------------SAANFLLVQSQG--SALQLQEKLLQQHRILIRDCLSFP----E----------------- 330 (360)
T ss_pred --CC----------------CCCCEEEEEcCC--CHHHHHHHHHhhCCEEEEeCCCCC----C-----------------
Confidence 22 134556666543 345666664 56688877664321 0
Q ss_pred CCCCeEEEEeccCC-HHHHHHHHHH
Q 019543 309 LTEDLVRISVGIED-VNDLISDLDK 332 (339)
Q Consensus 309 ~~~~~lRisvg~e~-~~~li~~l~~ 332 (339)
..++.+||+++... .+.+.+.|.+
T Consensus 331 ~~~~~iRi~~~~~~~~~~l~~al~~ 355 (360)
T PRK07392 331 LGDRYFRVAVRTEAENQRLLEALAA 355 (360)
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 13468999999854 3444444443
No 196
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.64 E-value=5.2e-14 Score=135.33 Aligned_cols=236 Identities=14% Similarity=0.116 Sum_probs=142.4
Q ss_pred chHHHHHHHHHhHhC--------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 55 PTRDALESLLAKLDK--------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g--------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
.....+++.++++++ .++.++++++++++..++ .++++||+|+++++.|.+....++
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~ 152 (394)
T PRK06836 73 AGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD 152 (394)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc
Confidence 345566677776653 346777777789987654 578999999999998876553322
Q ss_pred --------------------------------------HHHHHHHHH------cCCEEEEeCCcCCCCCc-Cc----c-c
Q 019543 112 --------------------------------------RKIAEMAHA------HGALLLVDNSIMSPVLS-RP----L-E 141 (339)
Q Consensus 112 --------------------------------------~~I~~la~~------~g~~livD~a~a~g~~~-~~----~-~ 141 (339)
++|+++|++ ||+++|+|+++....+. .. . .
T Consensus 153 ~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 232 (394)
T PRK06836 153 TFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKY 232 (394)
T ss_pred cCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHc
Confidence 889999999 89999999999643221 11 1 1
Q ss_pred CCCeEEEeccccccccCCCceEEEEEEcChhHHHH---HHH---HHHhcC-CCCChHHHHHHHhchhhHHHHHHHHHHHH
Q 019543 142 LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE---LYF---LQNAEG-SGLAPFDCWICLRGVKTMALRVEKQQDNA 214 (339)
Q Consensus 142 ~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~---l~~---~~~~~~-~~~~~~~a~~~~~~l~~~~~r~~~~~~~a 214 (339)
..-.++++|+||.++.+| .+.|++++++ .+.+. +.. ..+..+ ...++.....+...++.- .+.++..++.
T Consensus 233 ~~~~i~~~S~SK~~~~pG-lRiG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~r 309 (394)
T PRK06836 233 YDNSIVVYSFSKSLSLPG-ERIGYIAVNP-EMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-VDVSIYKRNR 309 (394)
T ss_pred cCcEEEEecchhhccCcc-eeeEEEecCH-HHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-HHHHHHHHHH
Confidence 223689999999999766 4567777764 34322 111 111122 234444433333333331 2344555667
Q ss_pred HHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccc
Q 019543 215 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 215 ~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~ 294 (339)
+.+.+.|+.+ +++ +..| ..|..+++.++. ....++++.|...|+.+..|..+.
T Consensus 310 ~~l~~~L~~~-g~~-~~~~----------------~gg~~~~~~~~~-~~~~~~~~~l~~~gv~v~~g~~f~-------- 362 (394)
T PRK06836 310 DLLYDGLTEL-GFE-CVKP----------------QGAFYLFPKSPE-EDDVAFCEKAKKHNLLLVPGSGFG-------- 362 (394)
T ss_pred HHHHHHHHhC-CCE-eecC----------------CceEEEEEeCCC-CCHHHHHHHHHhCCEEEECchhcC--------
Confidence 7788888776 332 2222 124456665643 234567777777788777654321
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEeccCCHH---HHHHHHHHHHhc
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVGIEDVN---DLISDLDKALRT 336 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg~e~~~---~li~~l~~al~~ 336 (339)
.++.+||+++. +.+ +-++.|.+++++
T Consensus 363 ---------------~~~~iRi~~~~-~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 363 ---------------CPGYFRLSYCV-DTETIERSLPAFEKLAKE 391 (394)
T ss_pred ---------------CCCeEEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 12579999984 332 335556665543
No 197
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=9e-15 Score=138.46 Aligned_cols=238 Identities=15% Similarity=0.138 Sum_probs=149.6
Q ss_pred ccCCCCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCC-CEEEEcCCCccchHHHHH-------------
Q 019543 49 YTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTG-EEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 49 y~r~~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~G-D~Vi~~~~~y~~~~~~~~------------- 111 (339)
.+|+..+...+|++.+++++|.+ ++++++++++++..++ .++++| |+|++++|.|.......+
T Consensus 51 ~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~ 130 (351)
T PRK01688 51 LNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD 130 (351)
T ss_pred cccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC
Confidence 44555566789999999999854 5666666688987655 477887 999999998865443222
Q ss_pred ----------------------------------HHHHHHHHHc--CCEEEEeCCcCCCCCc-Cc---cc-CCCeEEEec
Q 019543 112 ----------------------------------RKIAEMAHAH--GALLLVDNSIMSPVLS-RP---LE-LGADIVMHS 150 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~--g~~livD~a~a~g~~~-~~---~~-~~~Di~~~S 150 (339)
++|.++++.. +.+||+||+|...... .. .. ..--+++.|
T Consensus 131 ~~~~d~~~l~~~~~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rS 210 (351)
T PRK01688 131 NWQLDLPAIADNLDGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRT 210 (351)
T ss_pred CCCCCHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEec
Confidence 4555554432 6899999999643311 11 11 122488899
Q ss_pred cccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch-----hhHHHHHHHHHHHHHHHHHHHhCCC
Q 019543 151 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 151 ~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l-----~~~~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
|||++|.+| .+.|++++++ ++++.++..+.. +.++......+...| +.+..++++..++.+++.+.|+.++
T Consensus 211 fSK~~glaG-lRiGy~i~~~-~~i~~l~~~~~~--~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 286 (351)
T PRK01688 211 LSKAFALAG-LRCGFTLANE-EVINLLLKVIAP--YPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIP 286 (351)
T ss_pred chHhhcCHH-HHHhHHhCCH-HHHHHHHhccCC--CCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998655 4456777764 677777654322 233433322332333 3445556666777888999998877
Q ss_pred CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHH
Q 019543 226 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 305 (339)
Q Consensus 226 ~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~ 305 (339)
++.. .+|. .+..+++.+.+ ..++.+.|...|+.++.++. .+
T Consensus 287 ~~~~-~~ps----------------~~nfi~~~~~~---~~~l~~~L~~~gi~vr~~~~-----~~-------------- 327 (351)
T PRK01688 287 CVEQ-VFDS----------------ETNYILARFTA---SSAVFKSLWDQGIILRDQNK-----QP-------------- 327 (351)
T ss_pred CCCe-ECCC----------------CCcEEEEEcCC---HHHHHHHHHHCCeEEEECCC-----cC--------------
Confidence 6532 2342 35566676653 35677777777888774321 01
Q ss_pred hCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 306 ARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 306 ~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
| .++.+|||+|. ++..+.|.++|+
T Consensus 328 --~-~~~~iRis~~~---~~e~~~l~~al~ 351 (351)
T PRK01688 328 --G-LSNCLRITIGT---REECQRVIDALR 351 (351)
T ss_pred --C-CCCeEEEeCCC---HHHHHHHHHhhC
Confidence 1 23679999994 345567777663
No 198
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.64 E-value=3.2e-14 Score=139.55 Aligned_cols=237 Identities=13% Similarity=0.116 Sum_probs=143.6
Q ss_pred HHHHHHHHhHh----C------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 58 DALESLLAKLD----K------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 58 ~~le~~la~~~----g------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
.+|++.+|+++ | .+++++++++++++..++ .+++|||.|++++|.|.+....+.
T Consensus 89 ~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~ 168 (468)
T PLN02450 89 PAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSS 168 (468)
T ss_pred HHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCc
Confidence 34666666654 2 235666666688887544 588999999999998865422110
Q ss_pred ---------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-----ccc
Q 019543 112 ---------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-----PLE 141 (339)
Q Consensus 112 ---------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-----~~~ 141 (339)
++|+++|++||++||+||+|+.-.+.. .+.
T Consensus 169 ~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~ 248 (468)
T PLN02450 169 NGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVME 248 (468)
T ss_pred cCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHH
Confidence 789999999999999999997432211 111
Q ss_pred ------------CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh-------h
Q 019543 142 ------------LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-------T 202 (339)
Q Consensus 142 ------------~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~-------~ 202 (339)
..--+++.||||.++.+| .+.|+++++++.+.+.+.... .++ ..+.....++...|+ .
T Consensus 249 ~~~~~~~~~~~~~~~vi~l~S~SK~~~l~G-lRiG~li~~~~~l~~~~~~~~-~~~-~~s~~~Q~a~~~~L~~~~~~~~~ 325 (468)
T PLN02450 249 VLKDRKLENTDVSNRVHIVYSLSKDLGLPG-FRVGAIYSNDEMVVSAATKMS-SFG-LVSSQTQYLLSALLSDKKFTKNY 325 (468)
T ss_pred HhhhcccccCCCCCcEEEEEeccccCCCCC-ccEEEEEECCHHHHHHHHHHh-hcC-CCCHHHHHHHHHHhCCchhHHHH
Confidence 112378899999998766 456788887655555554443 233 234443333333332 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCCH------HHHHHHHccC-Cc
Q 019543 203 MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSL------ALSKHVVETT-KY 274 (339)
Q Consensus 203 ~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~------~~~~~~~~~L-~~ 274 (339)
+...+++..+..+.+.+.|+.+ ++.. ++ ..++ .+++.+... +...++.+.| +.
T Consensus 326 l~~~~~~l~~rr~~l~~~L~~~-gi~~--~~----------------~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~ 386 (468)
T PLN02450 326 LEENQKRLKQRQKKLVSGLEAA-GIKC--LK----------------SNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYE 386 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCcc--cC----------------CCceEEEEEEchHhcCcCCchHHHHHHHHHHHh
Confidence 3445666677777888888876 4321 11 1234 667766421 1223455554 45
Q ss_pred ceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCC---HHHHHHHHHHHHhcC
Q 019543 275 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED---VNDLISDLDKALRTG 337 (339)
Q Consensus 275 ~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~---~~~li~~l~~al~~~ 337 (339)
.|+.+..|..+. + ..++.+||+++..+ .++-++.|.+++++.
T Consensus 387 ~gV~v~PG~~f~----~-----------------~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 387 VKLNISPGSSCH----C-----------------TEPGWFRVCFANMSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred CCEEEeCccccC----C-----------------CCCCEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 688887775321 1 13478999999522 344466676666544
No 199
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.64 E-value=7.1e-14 Score=137.81 Aligned_cols=222 Identities=13% Similarity=0.095 Sum_probs=133.0
Q ss_pred CeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH--------------------------------------
Q 019543 71 DRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS-------------------------------------- 111 (339)
Q Consensus 71 ~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~-------------------------------------- 111 (339)
++.++++++++|+..+ ..+++|||.|++++|.|++....+.
T Consensus 120 e~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~ 199 (496)
T PLN02376 120 ERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKK 199 (496)
T ss_pred hhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCC
Confidence 4566777778999854 4589999999999998876542111
Q ss_pred ----------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc-cC---------CCe--EEEecccc
Q 019543 112 ----------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL-EL---------GAD--IVMHSATK 153 (339)
Q Consensus 112 ----------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~-~~---------~~D--i~~~S~sK 153 (339)
++|+++|++||+.||+||+|+..++.. .+ .. ..+ +++.||||
T Consensus 200 ~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK 279 (496)
T PLN02376 200 VKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSK 279 (496)
T ss_pred eeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccc
Confidence 789999999999999999997543311 10 01 112 45799999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh-------HHHHHHHHHHHHHHHHHHHhCCCC
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASHPR 226 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~-------~~~r~~~~~~~a~~l~~~L~~~~~ 226 (339)
.+|.+|. +.|++++.++.+.+.++... .++ ..+.....++...|+. +....+++.++.+.+.+.|++. +
T Consensus 280 ~~glpGl-RvG~li~~~~~l~~~~~~~~-~~~-~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-g 355 (496)
T PLN02376 280 DMGLPGF-RVGIVYSFNDSVVSCARKMS-SFG-LVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-D 355 (496)
T ss_pred cCCCCcc-eEEEEEECCHHHHHHHHHHh-hcC-CCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-C
Confidence 9987774 56788886656655554443 233 2444444433333321 1222444556666777777764 3
Q ss_pred ceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-------HHHHHHHccC-CcceeecccCCcccceeccccccCCC
Q 019543 227 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-------ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHAS 298 (339)
Q Consensus 227 i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-------~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~ 298 (339)
+.. .+ ...|..+|+.+... +...+|++.+ +..|+.++.|..+ ++
T Consensus 356 i~~--~~---------------~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F----~~------- 407 (496)
T PLN02376 356 IAC--LT---------------SNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSF----RC------- 407 (496)
T ss_pred Ccc--cC---------------CCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCcccc----CC-------
Confidence 321 11 11356777777421 1224566655 3458888877532 11
Q ss_pred CCHHHHHhCCCCCCeEEEEeccCCHHH---HHHHHHHHH
Q 019543 299 IPVEVRQARGLTEDLVRISVGIEDVND---LISDLDKAL 334 (339)
Q Consensus 299 ~~~~~~~~~g~~~~~lRisvg~e~~~~---li~~l~~al 334 (339)
-.++.+||+++..+.+. -+++|.+++
T Consensus 408 ----------~~~g~~Ri~fa~~~~~~l~~al~rl~~~l 436 (496)
T PLN02376 408 ----------TEPGWFRICFANMDDDTLHVALGRIQDFV 436 (496)
T ss_pred ----------CCCCEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 02468999999633333 344454444
No 200
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.64 E-value=2.9e-14 Score=137.42 Aligned_cols=242 Identities=14% Similarity=0.099 Sum_probs=149.5
Q ss_pred CchHHHHHHHHHhHhCCC---eEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchH--HHH-----------------
Q 019543 54 NPTRDALESLLAKLDKAD---RALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTD--RLL----------------- 110 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~---~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~--~~~----------------- 110 (339)
....+++++.+++++|.+ .+++.++|+.++.++ ..+++|||+|+++++.|.+.. ...
T Consensus 41 ~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~ 120 (401)
T PLN02409 41 PALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQG 120 (401)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCC
Confidence 457789999999999874 356777778888754 458899999999987654332 110
Q ss_pred ----------------H-------------------HHHHHH--HHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccc
Q 019543 111 ----------------S-------------------RKIAEM--AHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSAT 152 (339)
Q Consensus 111 ----------------~-------------------~~I~~l--a~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~s 152 (339)
+ ++|.++ |+++|+++++|++++.|... +...+++|++++|.+
T Consensus 121 ~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~ 200 (401)
T PLN02409 121 ADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGSQ 200 (401)
T ss_pred CCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEcCc
Confidence 1 889999 99999999999999877542 334568999999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHH------------Hh--cC---CCCChHHHH-HHHhchhh-----HHHHHHH
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQ------------NA--EG---SGLAPFDCW-ICLRGVKT-----MALRVEK 209 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~------------~~--~~---~~~~~~~a~-~~~~~l~~-----~~~r~~~ 209 (339)
|+++++.+ .|+++.++ +..+++.... +. .+ ...++.... .+..+++. ++.+.++
T Consensus 201 K~l~~P~G--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~ 277 (401)
T PLN02409 201 KALSLPTG--LGIVCASP-KALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIAR 277 (401)
T ss_pred cccCcCCC--cceeEECH-HHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99987653 57888775 5666654210 01 11 112222222 22223332 3445566
Q ss_pred HHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcccce
Q 019543 210 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLI 288 (339)
Q Consensus 210 ~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~~ 288 (339)
..+.++++.+.|+.. +++.+. |. +. .....+++|.+.+.....++.+.| +.+++.+..|..
T Consensus 278 ~~~l~~~l~~~L~~~-g~~~~~-~~----~~--------~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~---- 339 (401)
T PLN02409 278 HARLGEATRLAVEAW-GLKLCT-KK----PE--------WRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLN---- 339 (401)
T ss_pred HHHHHHHHHHHHHHc-CCeecc-CC----hh--------hcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCC----
Confidence 677788888888765 443221 21 00 002346667664332334555554 456776665431
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+ .....+|||...+..++.+..+.+||+
T Consensus 340 --~-----------------~~~~~~Rig~~g~~~~~~~~~~~~~~~ 367 (401)
T PLN02409 340 --K-----------------VAGKVFRIGHLGNVNELQLLGALAGVE 367 (401)
T ss_pred --c-----------------ccCCEEEEcCCCCCCHHHHHHHHHHHH
Confidence 1 134679999977665554444444443
No 201
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=2.3e-14 Score=136.65 Aligned_cols=229 Identities=17% Similarity=0.175 Sum_probs=140.5
Q ss_pred hHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------------
Q 019543 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------------- 111 (339)
.-.+|++.+++++|.+ +.++++++++++..++ .++++||+|+++.+.|+.....++
T Consensus 72 ~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 151 (371)
T PRK05166 72 QGRALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDA 151 (371)
T ss_pred cHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHH
Confidence 3358999999999864 4555555578887554 478999999999998875543222
Q ss_pred ---------------------------HHHHHHHHH--cCCEEEEeCCcCCCCCcC---c----cc-CC-CeEEEecccc
Q 019543 112 ---------------------------RKIAEMAHA--HGALLLVDNSIMSPVLSR---P----LE-LG-ADIVMHSATK 153 (339)
Q Consensus 112 ---------------------------~~I~~la~~--~g~~livD~a~a~g~~~~---~----~~-~~-~Di~~~S~sK 153 (339)
+++.++++. .++++|+|++|....... . .. .. --|++.||||
T Consensus 152 l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK 231 (371)
T PRK05166 152 LCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSK 231 (371)
T ss_pred HHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechH
Confidence 444444443 488999999996433211 1 11 11 2488999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch---hhHHHHHHHHHHHHHHHHHHHhCCCCceEE
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFLASHPRVKKV 230 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l---~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v 230 (339)
.++.+|. +.||++++++++.+.+...+. ....+.+...++...+ +.++..++...++.+++.+.|+.+ ++. +
T Consensus 232 ~~~l~Gl-RiG~~i~~~~~l~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~ 306 (371)
T PRK05166 232 AYGLAGL-RVGYGLVSDPELVGLLDRVRT--PFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYR-I 306 (371)
T ss_pred hhhcchh-heeeeecCCHHHHHHHHHhcc--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCe-e
Confidence 9987664 566876655677777765442 2334544433333322 234444556667778888888876 342 2
Q ss_pred ecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCC
Q 019543 231 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 310 (339)
Q Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~ 310 (339)
+|. .|..+++.+.. ...+|++.|...|+.+..|.. + + .
T Consensus 307 -~p~----------------~g~fl~~~~~~--~~~~l~~~l~~~gi~v~p~~~------~----------------~-~ 344 (371)
T PRK05166 307 -APS----------------RANFLFFDARR--PASAVAEALLRQGVIVKPWKQ------P----------------G-F 344 (371)
T ss_pred -CCC----------------cCCEEEEeCCC--CHHHHHHHHHHCCeEEecCCC------C----------------C-C
Confidence 231 35567776642 235677777666887765421 1 0 2
Q ss_pred CCeEEEEeccCC-HHHHHHHHH
Q 019543 311 EDLVRISVGIED-VNDLISDLD 331 (339)
Q Consensus 311 ~~~lRisvg~e~-~~~li~~l~ 331 (339)
++.+|||++..+ .+.+++.|.
T Consensus 345 ~~~iRi~~~~~~~~~~l~~~l~ 366 (371)
T PRK05166 345 ETFIRVSIGSPEENDHFVAALD 366 (371)
T ss_pred CCeEEEEcCCHHHHHHHHHHHH
Confidence 478999999654 344444433
No 202
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.64 E-value=2.6e-14 Score=135.32 Aligned_cols=235 Identities=17% Similarity=0.129 Sum_probs=141.4
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-Hhc----CCC-CEEEEcCCCccchHHHH---H------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLL----GTG-EEIVAGDDLYGGTDRLL---S------------ 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll----~~G-D~Vi~~~~~y~~~~~~~---~------------ 111 (339)
...+++++++++++|.+ ++++++|++.|+..++ .+. ++| |+|+++...++.....+ .
T Consensus 42 ~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~ 121 (353)
T TIGR03235 42 KAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVD 121 (353)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccC
Confidence 45789999999999975 4555555578887544 343 366 78888765444322111 0
Q ss_pred ------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccc
Q 019543 112 ------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 154 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~ 154 (339)
++|.++|+++|+++++|++|+.|... +....++|++++|++|+
T Consensus 122 ~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~ 201 (353)
T TIGR03235 122 ESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKI 201 (353)
T ss_pred CCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhc
Confidence 99999999999999999999988653 33346799999999998
Q ss_pred cccCCCceEEEEEEcChhHHHH--HHHH-------HHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHHH
Q 019543 155 IAGHSDVMAGVLAVKGERLAKE--LYFL-------QNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~--l~~~-------~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~L 221 (339)
++.+| .|+++.+++ .... +... ++....+.+....+.+..+++ ..+.+.++++++++++.+.|
T Consensus 202 ~gp~g---~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l 277 (353)
T TIGR03235 202 YGPKG---IGALVIRKR-GKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDAL 277 (353)
T ss_pred CCCCc---eEEEEEccC-cccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Confidence 75332 477777753 2211 1110 011112222222111222222 34556677778888888888
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCH
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 301 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~ 301 (339)
+. ++++.+.-|. ....++++|.+.+. ....+.+.|+. ++.++.|... ..... .+.
T Consensus 278 ~~-~g~~~~~~~~--------------~~~~~i~~~~~~~~-~~~~v~~~L~~-~i~v~~g~~~------~~~~~--~~~ 332 (353)
T TIGR03235 278 QT-LGVKLNGDPA--------------ETIPHILNFSIDGV-NSEALIVNLRA-DAAVSTGSAC------SSSKY--EPS 332 (353)
T ss_pred cc-CCeEEeCCcc--------------cccCCEEEEEeCCc-CHHHHHHHHhC-CeEEEchhhc------CCCCC--CCC
Confidence 77 6765332111 11356888877543 23456666755 7888766532 11111 122
Q ss_pred HHHHhCCCCC----CeEEEEe
Q 019543 302 EVRQARGLTE----DLVRISV 318 (339)
Q Consensus 302 ~~~~~~g~~~----~~lRisv 318 (339)
..+.++|+.+ +.||+|+
T Consensus 333 ~~l~~~g~~~~~~~~~~r~s~ 353 (353)
T TIGR03235 333 HVLQAMGLDTDRARGAIRFSW 353 (353)
T ss_pred HHHHHcCCCHHHhCccEEEeC
Confidence 4567788764 7788885
No 203
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.63 E-value=4.5e-14 Score=136.23 Aligned_cols=168 Identities=19% Similarity=0.176 Sum_probs=114.8
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHH----------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRL---------------------- 109 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~---------------------- 109 (339)
+++...+||+.+++++|.++++.++||++|+.. +.++++|||+|+ +++.|..+...
T Consensus 51 ~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V~-~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~ 129 (431)
T cd00617 51 GSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTVP-SNMHFDTTRGHIEANGAVPVDLVIDEAHDAQEL 129 (431)
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEEc-cCCcccchHHHHHhCCCEeEEEecccccccccc
Confidence 567788999999999999999999999999985 456899999884 55544332110
Q ss_pred -----------HH---------------------------------HHHHHHHHHcCCEEEEeCCcCCC-----------
Q 019543 110 -----------LS---------------------------------RKIAEMAHAHGALLLVDNSIMSP----------- 134 (339)
Q Consensus 110 -----------~~---------------------------------~~I~~la~~~g~~livD~a~a~g----------- 134 (339)
++ ++|.++|++||++||+|+++..+
T Consensus 130 ~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g 209 (431)
T cd00617 130 IPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEG 209 (431)
T ss_pred cCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhccccc
Confidence 00 68899999999999999997542
Q ss_pred CCcCcc-------cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh-----cCCCCChHHHHHHHhchhh
Q 019543 135 VLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-----EGSGLAPFDCWICLRGVKT 202 (339)
Q Consensus 135 ~~~~~~-------~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~-----~~~~~~~~~a~~~~~~l~~ 202 (339)
.....+ ....|.+..|+.|..+.+ +||++++++++++++++..... ...+++..+.+++..+|+.
T Consensus 210 ~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~---~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e 286 (431)
T cd00617 210 YRDKSIAEIAREMFSYADGCTMSAKKDGLVN---IGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLRE 286 (431)
T ss_pred ccCCCHHHHHHHhhccCCEEEEEeecCCCCc---cceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHh
Confidence 211111 124678888888876643 4899999886788888754311 1234555443333334433
Q ss_pred H--HHHHHHHHHHHHHHHHHHhCC
Q 019543 203 M--ALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 203 ~--~~r~~~~~~~a~~l~~~L~~~ 224 (339)
. ...+++..++++++.+.|++.
T Consensus 287 ~~~~~~l~~~~~~r~~l~~~L~~~ 310 (431)
T cd00617 287 AVEEDYLRHRVEQVRYLGDRLDEA 310 (431)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHC
Confidence 2 344555556668888888876
No 204
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.63 E-value=2.2e-14 Score=137.66 Aligned_cols=208 Identities=16% Similarity=0.204 Sum_probs=130.3
Q ss_pred CCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-h----cCCCC----EEEEcCCCccchHH--------------
Q 019543 52 SGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-L----LGTGE----EIVAGDDLYGGTDR-------------- 108 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-l----l~~GD----~Vi~~~~~y~~~~~-------------- 108 (339)
..++...+|+++|+++.+.+.+++++||++|+...+. + ..+|| +|++.++.|++...
T Consensus 70 ~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 149 (389)
T PRK01278 70 YRIPEQERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEG 149 (389)
T ss_pred cCChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhccc
Confidence 3578889999999999888899999999999975433 2 45777 89888776654310
Q ss_pred -----------------HHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCcc-
Q 019543 109 -----------------LLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRPL- 140 (339)
Q Consensus 109 -----------------~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~~- 140 (339)
.++ ++|.++|++||+++|+||+|. .|..+...
T Consensus 150 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~ 229 (389)
T PRK01278 150 FGPLVPGFDQVPFGDIEALKAAITPNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFA 229 (389)
T ss_pred CCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccee
Confidence 000 899999999999999999986 22222211
Q ss_pred ----cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHH--HHHHHHHHHH
Q 019543 141 ----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNA 214 (339)
Q Consensus 141 ----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a 214 (339)
....|+ .|++|.+++ | ...|++++++ ++.+.+.......+.+.+|..+++++..|+.+. ...++.+++.
T Consensus 230 ~~~~~~~pdi--~t~sK~l~~-G-~~ig~~~~~~-~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~ 304 (389)
T PRK01278 230 HEWAGVTPDI--MAVAKGIGG-G-FPLGACLATE-EAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMG 304 (389)
T ss_pred ecccCCCCCE--EEEehhccC-C-cceEEEEEcH-HHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 122354 578999984 4 4456677764 566655433223344567877777766666542 2345555666
Q ss_pred HHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeec
Q 019543 215 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITV 279 (339)
Q Consensus 215 ~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v 279 (339)
+++.+.|+.+.. .+|.+.. ..++.|.++++.+.. .+.+|++.|...|+.+
T Consensus 305 ~~l~~~l~~l~~----~~~~~~~---------~v~g~G~~~~i~~~~--~~~~~~~~l~~~GV~~ 354 (389)
T PRK01278 305 LYLKQKLEGLVD----RFPDVIE---------EVRGKGLLLGLKCVV--PNRDLVQALRDEGLLT 354 (389)
T ss_pred HHHHHHHHHHHh----hCCCcee---------eEecccEEEEEEEec--CHHHHHHHHHHCCeEE
Confidence 666666654311 0110000 013456777777643 3457777776656653
No 205
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.63 E-value=6.5e-14 Score=135.28 Aligned_cols=208 Identities=16% Similarity=0.129 Sum_probs=126.1
Q ss_pred hHHHHHHHHHhHh----C----CCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHH------H------------
Q 019543 56 TRDALESLLAKLD----K----ADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDR------L------------ 109 (339)
Q Consensus 56 ~~~~le~~la~~~----g----~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~------~------------ 109 (339)
...+|++.+|+++ | .++.++++++++|+..++.++.|||+|++++|.|..... .
T Consensus 77 G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~ 156 (409)
T PRK07590 77 GYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNILDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSG 156 (409)
T ss_pred CCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccc
Confidence 3456777777654 2 345667777788888766778999999999998864321 0
Q ss_pred HH----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc----Ccc-cC-C
Q 019543 110 LS----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS----RPL-EL-G 143 (339)
Q Consensus 110 ~~----------------------------------------~~I~~la~~~g~~livD~a~a~g~~~----~~~-~~-~ 143 (339)
+. ++|+++|++||++||+||+|+..... .++ .. +
T Consensus 157 ~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ 236 (409)
T PRK07590 157 IVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEG 236 (409)
T ss_pred eeEeecccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCC
Confidence 00 88999999999999999999743221 111 11 1
Q ss_pred ---CeEEEeccccccccCCCceEEEEEEcChhHHHHH-----------HHHHHhcC-CCCChHHHHHHHhch-----hhH
Q 019543 144 ---ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL-----------YFLQNAEG-SGLAPFDCWICLRGV-----KTM 203 (339)
Q Consensus 144 ---~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l-----------~~~~~~~~-~~~~~~~a~~~~~~l-----~~~ 203 (339)
.-|+++||||.++.+|. +.||+++++ ++++.+ ........ ...+.+...++...+ +.+
T Consensus 237 ~~~~vi~~~SfSK~~~~pGl-RiG~~i~~~-~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~ 314 (409)
T PRK07590 237 ARECAIEFRSFSKTAGFTGT-RCAYTVVPK-ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQI 314 (409)
T ss_pred cccceEEEecCccccCCcCc-eeEEEEcCH-HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHH
Confidence 23778999999987664 567888765 566521 11111111 234443333322222 233
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccC
Q 019543 204 ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFG 282 (339)
Q Consensus 204 ~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G 282 (339)
...++...++.+.+.+.|+.+ ++. +.-| ..+..+|+.+.+...+.+|++.+ +..++.+..|
T Consensus 315 ~~~~~~~~~~r~~l~~~L~~~-~~~-~~~~----------------~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg 376 (409)
T PRK07590 315 KELIDYYMENAKIIREGLESA-GFE-VYGG----------------VNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPG 376 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCc-eecC----------------CcceEEEEECCCCCCHHHHHHHHHHHCCEEEeCh
Confidence 444556667778888888876 332 1111 13457788875433345666655 4557777666
Q ss_pred C
Q 019543 283 S 283 (339)
Q Consensus 283 ~ 283 (339)
.
T Consensus 377 ~ 377 (409)
T PRK07590 377 S 377 (409)
T ss_pred h
Confidence 4
No 206
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=2.7e-14 Score=134.33 Aligned_cols=224 Identities=11% Similarity=0.105 Sum_probs=145.5
Q ss_pred CchHHHHHHHHHhHhC-----CCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 54 NPTRDALESLLAKLDK-----ADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g-----~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
.+...+|++.++++++ .+++++++++++++..++..+ |.|++++|.|......++
T Consensus 55 ~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~---d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 131 (335)
T PRK14808 55 DSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF---DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI 131 (335)
T ss_pred CCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh---CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCC
Confidence 4457789999999987 345666666689998766644 789999999887654433
Q ss_pred --------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc---cc-CCCeEEEeccccccccCCCc
Q 019543 112 --------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP---LE-LGADIVMHSATKFIAGHSDV 161 (339)
Q Consensus 112 --------------------------~~I~~la~~~g~~livD~a~a~g~~~~~---~~-~~~Di~~~S~sK~l~g~~~~ 161 (339)
+++.+++ +++++||+||+|........ +. ..--+++.||||.++.+|.
T Consensus 132 ~~~~~~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~Gl- 209 (335)
T PRK14808 132 PEVNVGEGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQ- 209 (335)
T ss_pred ChhHccCCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCccc-
Confidence 7888888 58999999999964321111 11 1224888999999997664
Q ss_pred eEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHH---hchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCC
Q 019543 162 MAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL---RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 238 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~---~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~ 238 (339)
+.||+++++ ++++.+...+.. ...+.....++. ...+.+.++.++..++.+++.+.|+.+ +++ + +|
T Consensus 210 RvG~~v~~~-~~~~~l~~~~~~--~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~~----- 278 (335)
T PRK14808 210 RIGYVVSSE-KFIDAYNRVRLP--FNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYR-I-TD----- 278 (335)
T ss_pred ceEEEEeCH-HHHHHHHHhcCC--CCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-CC-----
Confidence 457888764 677777665422 333443333332 223334555556666677888888876 332 1 22
Q ss_pred CchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe
Q 019543 239 PGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 318 (339)
Q Consensus 239 ~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv 318 (339)
+.|+.+++.+++.+ ..++.+.|...|+.|+. + .+.+|||+
T Consensus 279 -----------~~g~f~~~~l~~~~-~~~~~~~l~~~Gi~V~~------~----------------------~~~~Risi 318 (335)
T PRK14808 279 -----------SRGNFVFIFMEKEE-KERLLEHLRAKNIAVRS------F----------------------REGVRITI 318 (335)
T ss_pred -----------CCCeEEEEeCCCcc-HHHHHHHHHHCCeEEEE------C----------------------CCCeEEec
Confidence 14678888886433 35677778777887751 0 13489999
Q ss_pred ccCCHHHHHHHHHHHHhc
Q 019543 319 GIEDVNDLISDLDKALRT 336 (339)
Q Consensus 319 g~e~~~~li~~l~~al~~ 336 (339)
|..+..+ .+.++|+.
T Consensus 319 ~~~~~~~---~~~~~l~~ 333 (335)
T PRK14808 319 GKREEND---MILKELEV 333 (335)
T ss_pred CCHHHHH---HHHHHHHh
Confidence 9764333 56666553
No 207
>PRK03321 putative aminotransferase; Provisional
Probab=99.63 E-value=2.6e-14 Score=135.28 Aligned_cols=230 Identities=13% Similarity=0.132 Sum_probs=146.3
Q ss_pred CchHHHHHHHHHhHhCCC-eEEEcCcH-HHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 54 NPTRDALESLLAKLDKAD-RALCFTSG-MAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~-~~l~~~sG-~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.+...+|++.+|++++.+ +.+++++| ++++..++ .+++|||+|+++.+.|.......+
T Consensus 56 ~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 135 (352)
T PRK03321 56 DMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDL 135 (352)
T ss_pred CCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCH
Confidence 346789999999999865 34555666 55566544 478999999999887654322111
Q ss_pred -----------------------------HHHHHHHHH--cCCEEEEeCCcCCCCCcC----ccc----CCCeEEEeccc
Q 019543 112 -----------------------------RKIAEMAHA--HGALLLVDNSIMSPVLSR----PLE----LGADIVMHSAT 152 (339)
Q Consensus 112 -----------------------------~~I~~la~~--~g~~livD~a~a~g~~~~----~~~----~~~Di~~~S~s 152 (339)
++|.++|++ +|+++|+|++|+...... ++. ..--++++|||
T Consensus 136 ~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 215 (352)
T PRK03321 136 DAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFS 215 (352)
T ss_pred HHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecch
Confidence 888888887 599999999996433211 111 12248889999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhc---hhhHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG---VKTMALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~---l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
|.++.+| .+.|+++++ +++++.+.... .....+.....++... .+.+..++++..++..++.+.|+.. ++.
T Consensus 216 K~~g~~G-lRiG~~v~~-~~~~~~~~~~~--~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~- 289 (352)
T PRK03321 216 KAYGLAG-LRVGYAVGH-PEVIAALRKVA--VPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWT- 289 (352)
T ss_pred HHhhhHH-HhhhhhcCC-HHHHHHHHHhc--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-
Confidence 9998655 456788876 47777776542 2345555544433333 3444555555555566677778765 322
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 309 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~ 309 (339)
+ .| ..|..+++.++. .+.+|++.|+..|+.+.. .
T Consensus 290 ~-~~----------------~~g~~i~i~l~~--~~~~~~~~l~~~gI~v~~----------~----------------- 323 (352)
T PRK03321 290 V-PP----------------SQANFVWLPLGE--RTADFAAAAAEAGVVVRP----------F----------------- 323 (352)
T ss_pred c-CC----------------CCCCEEEEeCCC--CHHHHHHHHHHCCEEEEc----------c-----------------
Confidence 1 11 135677887753 245778888777776541 0
Q ss_pred CCCeEEEEecc-CCHHHHHHHHHHHHh
Q 019543 310 TEDLVRISVGI-EDVNDLISDLDKALR 335 (339)
Q Consensus 310 ~~~~lRisvg~-e~~~~li~~l~~al~ 335 (339)
.+..|||+++. ++.+.+++.|.+++.
T Consensus 324 ~~~~iRi~~~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 324 AGEGVRVTIGAPEENDAFLRAARAWRA 350 (352)
T ss_pred CCCcEEEeeCCHHHHHHHHHHHHHHhc
Confidence 11349999986 445666777776654
No 208
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=2.5e-14 Score=136.53 Aligned_cols=231 Identities=13% Similarity=0.131 Sum_probs=141.8
Q ss_pred chHHHHHHHHHhHhCC----------CeEEEcCcHHHHHHH-HHHhcCCCC-EEEEcCCCccchHHHHH-----------
Q 019543 55 PTRDALESLLAKLDKA----------DRALCFTSGMAALAA-VTHLLGTGE-EIVAGDDLYGGTDRLLS----------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~----------~~~l~~~sG~~A~~~-il~ll~~GD-~Vi~~~~~y~~~~~~~~----------- 111 (339)
+...+|++.++++++. +++++++++++|+.. +.+++.+|| .|++++|.|......++
T Consensus 66 ~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~ 145 (374)
T PRK02610 66 GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGR 145 (374)
T ss_pred CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecC
Confidence 3456788888888762 246666666888874 455677886 89999998865432211
Q ss_pred ---------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc---cc-C
Q 019543 112 ---------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP---LE-L 142 (339)
Q Consensus 112 ---------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~---~~-~ 142 (339)
++|.++| +|++||+||+|........ +. .
T Consensus 146 ~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~~~~~~~~~ 223 (374)
T PRK02610 146 DPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTTLVGELAQH 223 (374)
T ss_pred CcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCccchHHHHhcC
Confidence 4444444 4899999999964322111 11 1
Q ss_pred CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch---hhHHHHHHHHHHHHHHHHH
Q 019543 143 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAE 219 (339)
Q Consensus 143 ~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l---~~~~~r~~~~~~~a~~l~~ 219 (339)
.--|++.||||.+|.+|. +.||++++ +++++.+...+. .+.++.....++...+ +.+..++++..+..+.+.+
T Consensus 224 ~~~ivi~SfSK~~g~~Gl-RiG~~v~~-~~l~~~l~~~~~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~ 299 (374)
T PRK02610 224 PNWVILRTFSKAFRLAAH-RVGYAIGH-PELIAVLEKVRL--PYNLPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQ 299 (374)
T ss_pred CCEEEEEecchhccCccc-ceeeeecC-HHHHHHHHHhcC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 123788999999988774 56688775 467777776542 2334444433333333 3333334444445566777
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 299 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~ 299 (339)
.|+.++++. + +|. .|..+++.+.+.....+|++.|...|+.++.
T Consensus 300 ~L~~~~~~~-~-~p~----------------~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~------------------ 343 (374)
T PRK02610 300 ALQELPQLR-V-WPS----------------AANFLYLRLSQDAALAALHQALKAQGTLVRH------------------ 343 (374)
T ss_pred HHHhCCCcE-e-CCC----------------cceEEEEeCCCCCCHHHHHHHHHHCCEEEEe------------------
Confidence 887776653 2 331 3567777775433456777777776776531
Q ss_pred CHHHHHhCCCCCCeEEEEeccC-CHHHHHHHHHHHHhcC
Q 019543 300 PVEVRQARGLTEDLVRISVGIE-DVNDLISDLDKALRTG 337 (339)
Q Consensus 300 ~~~~~~~~g~~~~~lRisvg~e-~~~~li~~l~~al~~~ 337 (339)
.++.+|||++.. +.++.++.|.++++++
T Consensus 344 ----------~~~~lRls~~~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 344 ----------TGGGLRITIGTPEENQRTLERLQAALTQL 372 (374)
T ss_pred ----------CCCeEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 125699999853 3455666677666654
No 209
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.63 E-value=4.5e-14 Score=134.32 Aligned_cols=232 Identities=16% Similarity=0.119 Sum_probs=146.1
Q ss_pred hHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-Hhc----CCCCEEEEcCCCccchHHHHH-----------------
Q 019543 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLL----GTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll----~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
..+++++.+++++|.+ ..+++++|+.|+..++ .+. ++||+|+++++.+.......+
T Consensus 60 ~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~ 139 (371)
T PRK13520 60 LEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRV 139 (371)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcC
Confidence 3478999999999975 4678888899987543 232 368999998876554332211
Q ss_pred -------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC---cCc--c---cCCCeEEEeccc
Q 019543 112 -------------------------------RKIAEMAHAHGALLLVDNSIMSPVL---SRP--L---ELGADIVMHSAT 152 (339)
Q Consensus 112 -------------------------------~~I~~la~~~g~~livD~a~a~g~~---~~~--~---~~~~Di~~~S~s 152 (339)
++|.++|++||+++++|++|+.+.. ... . ..++|.+++|.+
T Consensus 140 d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~ 219 (371)
T PRK13520 140 DVKAVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPH 219 (371)
T ss_pred CHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCc
Confidence 9999999999999999999975532 111 1 246799999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHh-cC-------CCCChHHHHHHHhchh-----hHHHHHHHHHHHHHHHHH
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EG-------SGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAE 219 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~-~~-------~~~~~~~a~~~~~~l~-----~~~~r~~~~~~~a~~l~~ 219 (339)
|+..++. . +|+++..++++.+.+.....+ .+ .+.+....+.+...++ .++.+.++..++++++.+
T Consensus 220 K~~~a~~-~-~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~ 297 (371)
T PRK13520 220 KMGLAPI-P-AGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAE 297 (371)
T ss_pred cccCccC-C-ceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHH
Confidence 9865432 2 344444444565554321111 11 1112222222222232 245567777888899999
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 299 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~ 299 (339)
.|++. +++.+..| ..+++.|.+.+ ..++.+.|...|+.++...
T Consensus 298 ~L~~~-g~~~~~~~-----------------~~~~v~~~~~~---~~~v~~~L~~~gi~v~~~~---------------- 340 (371)
T PRK13520 298 ELKER-GFEPVIEP-----------------VLNIVAFDDPN---PDEVREKLRERGWRVSVTR---------------- 340 (371)
T ss_pred HHHhC-CCEEecCC-----------------CceEEEEecCC---HHHHHHHHHHCCceeccCC----------------
Confidence 99876 55422211 24577777653 3466666766676655211
Q ss_pred CHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 300 PVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 300 ~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.+..+|+|++..++++.++.+.++|++
T Consensus 341 ----------~~~~iRis~~~~~t~edi~~~~~~l~~ 367 (371)
T PRK13520 341 ----------CPEALRIVCMPHVTREHIENFLEDLKE 367 (371)
T ss_pred ----------CCCEEEEEEECCCCHHHHHHHHHHHHH
Confidence 135699999887788888888888764
No 210
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.63 E-value=7.3e-14 Score=133.74 Aligned_cols=171 Identities=19% Similarity=0.173 Sum_probs=121.6
Q ss_pred CcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcCCCCEEEEcCCCcc-chHH----------------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLGTGEEIVAGDDLYG-GTDR---------------- 108 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~~GD~Vi~~~~~y~-~~~~---------------- 108 (339)
-.|. ++|+..+||+.+++++|.++++.++||++|+.++.. .++|||+| +.+.+. .+..
T Consensus 72 d~Ya--gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~ 147 (460)
T PRK13237 72 EAYA--GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDE 147 (460)
T ss_pred hhhc--CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeeccc
Confidence 3466 889999999999999999999999999999986544 68999975 333221 1110
Q ss_pred ---------------------HHH-----------------------------HHHHHHHHHcCCEEEEeCCcCCC----
Q 019543 109 ---------------------LLS-----------------------------RKIAEMAHAHGALLLVDNSIMSP---- 134 (339)
Q Consensus 109 ---------------------~~~-----------------------------~~I~~la~~~g~~livD~a~a~g---- 134 (339)
.+. ++|.++|++||++|++|.|+..+
T Consensus 148 a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~f 227 (460)
T PRK13237 148 AHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYF 227 (460)
T ss_pred ccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhh
Confidence 000 89999999999999999999776
Q ss_pred -------CCcCcc-------cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhc-C----CCCCh-HHHH
Q 019543 135 -------VLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-G----SGLAP-FDCW 194 (339)
Q Consensus 135 -------~~~~~~-------~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~-~----~~~~~-~~a~ 194 (339)
+..+.+ ...+|.+++|++|.++.+ .||+|+++++++.++++.++-.+ | ..++- ..++
T Consensus 228 I~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~---~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~a 304 (460)
T PRK13237 228 IKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVN---IGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEA 304 (460)
T ss_pred hcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCC---CceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHH
Confidence 222222 135799999999999853 48999999999999998875433 3 23433 2223
Q ss_pred HHHhchhhH-HHHHHHHHHHHHHHHHHHhCC
Q 019543 195 ICLRGVKTM-ALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 195 ~~~~~l~~~-~~r~~~~~~~a~~l~~~L~~~ 224 (339)
++....+.+ ....+.+-+++++|.+.|.+.
T Consensus 305 lAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 305 MAIGIEESVQYEYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred HHhHHHhhchHHHHHHHHHHHHHHHHHHHHC
Confidence 332222222 255666677889999999865
No 211
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.62 E-value=1.6e-13 Score=136.38 Aligned_cols=170 Identities=13% Similarity=0.117 Sum_probs=102.4
Q ss_pred HHHHHHHHHhHh------C--CCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 57 RDALESLLAKLD------K--ADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~------g--~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
..+|++.+++++ + .+++++++++++++..+ .++++|||+|++++|.|......+.
T Consensus 187 ~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~ 266 (517)
T PRK13355 187 LFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSE 266 (517)
T ss_pred hHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccC
Confidence 567777777766 2 24566666668888754 4588999999999998876543322
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C---c-ccCCCe---E
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R---P-LELGAD---I 146 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~---~-~~~~~D---i 146 (339)
++|+++|++||++||+||+|..-.+. . . .....+ +
T Consensus 267 ~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi 346 (517)
T PRK13355 267 WYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCV 346 (517)
T ss_pred CCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEE
Confidence 88999999999999999999643321 1 1 111112 4
Q ss_pred EEeccccccccCCCceEEEEEE-cChhHH----HHHHHHHHhcCCCCChHHHHHHHhchh------hHHHHHHHHHHHHH
Q 019543 147 VMHSATKFIAGHSDVMAGVLAV-KGERLA----KELYFLQNAEGSGLAPFDCWICLRGVK------TMALRVEKQQDNAQ 215 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~-~~~~l~----~~l~~~~~~~~~~~~~~~a~~~~~~l~------~~~~r~~~~~~~a~ 215 (339)
+++||||.++.+|.++ ||+++ .++++. +.+.... ....+.+.....++...|+ .......+..++.+
T Consensus 347 ~~~S~SK~~~~~G~Ri-G~~i~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~ 424 (517)
T PRK13355 347 TFSGLSKSHMIAGYRI-GWMILSGNKRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRE 424 (517)
T ss_pred EEecchhhccCcccce-EEEEeeCchhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHH
Confidence 5689999998877665 56654 233332 2232222 1222333333333333332 12112233445567
Q ss_pred HHHHHHhCCCCce
Q 019543 216 KIAEFLASHPRVK 228 (339)
Q Consensus 216 ~l~~~L~~~~~i~ 228 (339)
.+.+.|+.+++++
T Consensus 425 ~l~~~L~~~~g~~ 437 (517)
T PRK13355 425 LVYNALNAIPGIS 437 (517)
T ss_pred HHHHHHhcCCCcc
Confidence 7888888876653
No 212
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.62 E-value=4.6e-14 Score=133.88 Aligned_cols=199 Identities=16% Similarity=0.148 Sum_probs=122.7
Q ss_pred hHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------------
Q 019543 56 TRDALESLLAKLDKA--DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------------- 111 (339)
....|++.++++++. ++.++++++++++..++ ++++|||+|++++|.|........
T Consensus 66 ~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~ 145 (357)
T PRK14809 66 SHADLTAALADRWDVSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTA 145 (357)
T ss_pred CHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCH
Confidence 456899999999874 35666666688987654 478999999999997653221110
Q ss_pred ----------------------------HHHHHHHHHc--CCEEEEeCCcCCCCCc-Ccc---c-CCCeEEEeccccccc
Q 019543 112 ----------------------------RKIAEMAHAH--GALLLVDNSIMSPVLS-RPL---E-LGADIVMHSATKFIA 156 (339)
Q Consensus 112 ----------------------------~~I~~la~~~--g~~livD~a~a~g~~~-~~~---~-~~~Di~~~S~sK~l~ 156 (339)
+++.++++.+ +++||+||+|+..... ... . ..--+++.||||.++
T Consensus 146 ~~~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~ 225 (357)
T PRK14809 146 DTVLDAYDGERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYG 225 (357)
T ss_pred HHHHHhhcCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhc
Confidence 4555555443 7899999999743321 111 1 112388899999998
Q ss_pred cCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceEEecC
Q 019543 157 GHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYA 233 (339)
Q Consensus 157 g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p 233 (339)
.+|. +.|++++++ ++.+.+.... ....++.....++...++. ++...+..+++.+.+.+.|... .+|
T Consensus 226 ~~Gl-RiG~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~ 295 (357)
T PRK14809 226 LAGL-RLGYAVVPE-EWADAYARVN--TPFAASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP------TWE 295 (357)
T ss_pred Ccch-hheeeecCH-HHHHHHHHhC--CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc------cCC
Confidence 7664 567888764 6777776543 2344555554444444432 2333344444555566656432 122
Q ss_pred CCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCC
Q 019543 234 GLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGS 283 (339)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~ 283 (339)
..|..+++.+.+ ..+|.+.|...|+.+..|.
T Consensus 296 ----------------~~g~f~~~~~~~---~~~~~~~l~~~gv~v~~g~ 326 (357)
T PRK14809 296 ----------------SAGNFVLAEVGD---ASAVAEAAQERGVIVRDCT 326 (357)
T ss_pred ----------------CCCCEEEEECCC---HHHHHHHHHHCCEEEEECc
Confidence 145677777753 3466777777788877664
No 213
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.62 E-value=1.6e-13 Score=131.00 Aligned_cols=173 Identities=19% Similarity=0.213 Sum_probs=123.0
Q ss_pred cccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcCCCCEEEEcCCCccchHHH-----------------
Q 019543 48 DYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLGTGEEIVAGDDLYGGTDRL----------------- 109 (339)
Q Consensus 48 ~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~~GD~Vi~~~~~y~~~~~~----------------- 109 (339)
.|. ++|+..+||+++++++|.++++.++||++|+.++.. .++|||+| +.+.|..+...
T Consensus 66 ~ya--g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea 141 (450)
T TIGR02618 66 AYA--GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEA 141 (450)
T ss_pred hhc--CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccc
Confidence 466 889999999999999999999999999999875444 68999987 44443221110
Q ss_pred -----------------HH---------------------------------HHHHHHHHHcCCEEEEeCCcCCC--CC-
Q 019543 110 -----------------LS---------------------------------RKIAEMAHAHGALLLVDNSIMSP--VL- 136 (339)
Q Consensus 110 -----------------~~---------------------------------~~I~~la~~~g~~livD~a~a~g--~~- 136 (339)
++ ++|.++|++||++|++|.|+..+ ++
T Consensus 142 ~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I 221 (450)
T TIGR02618 142 HDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFI 221 (450)
T ss_pred cccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhh
Confidence 00 89999999999999999999764 22
Q ss_pred --------cCcc-------cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCC-----CCChHHHHHH
Q 019543 137 --------SRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS-----GLAPFDCWIC 196 (339)
Q Consensus 137 --------~~~~-------~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~-----~~~~~~a~~~ 196 (339)
..++ ...+|.+++|+.|..+++ +||+|++++++++++++.++..++. .++......+
T Consensus 222 ~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~---~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~al 298 (450)
T TIGR02618 222 KEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVN---IGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAM 298 (450)
T ss_pred hcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCC---CceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHH
Confidence 1122 226799999999998854 5899998999999999988665432 2232221222
Q ss_pred HhchhhH-H-HHHHHHHHHHHHHHHHHhCCCCce
Q 019543 197 LRGVKTM-A-LRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 197 ~~~l~~~-~-~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
..+|+.. + .....+.+++++|.+.|++. +|.
T Consensus 299 a~gL~e~~~~~y~~~r~~~a~~La~~L~~~-Gvp 331 (450)
T TIGR02618 299 AIGIREAVDYEYIEHRVKQVRYLGDKLKAA-GVP 331 (450)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 3344443 2 33444556699999999887 554
No 214
>PLN02271 serine hydroxymethyltransferase
Probab=99.62 E-value=4.1e-14 Score=137.64 Aligned_cols=259 Identities=20% Similarity=0.200 Sum_probs=149.4
Q ss_pred CCcccCC--CCchHHHHHH----HHHhHhCCCe----EEE-cCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHH-----
Q 019543 46 PYDYTRS--GNPTRDALES----LLAKLDKADR----ALC-FTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDR----- 108 (339)
Q Consensus 46 ~~~y~r~--~~~~~~~le~----~la~~~g~~~----~l~-~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~----- 108 (339)
+|...|+ ++...+++|. +..++||+++ +=+ .-||+.|+.++ .++++|||.|+..+..++|...
T Consensus 179 G~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~ 258 (586)
T PLN02271 179 GMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYT 258 (586)
T ss_pred CCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhccccc
Confidence 4444564 5566667764 4456888665 333 44999999864 5699999999997664433211
Q ss_pred ----------------------------------HH-H-------------------HHHHHHHHHcCCEEEEeCCcCCC
Q 019543 109 ----------------------------------LL-S-------------------RKIAEMAHAHGALLLVDNSIMSP 134 (339)
Q Consensus 109 ----------------------------------~~-~-------------------~~I~~la~~~g~~livD~a~a~g 134 (339)
.. . ++|.++|+++|+++++|.+|..|
T Consensus 259 ~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aG 338 (586)
T PLN02271 259 PGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISG 338 (586)
T ss_pred ccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECccccc
Confidence 00 0 99999999999999999999888
Q ss_pred CCc-----CcccCCCeEEEeccccccccCCCceEEEEEEcCh-------------------hHHHHHHHHH--HhcCCCC
Q 019543 135 VLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-------------------RLAKELYFLQ--NAEGSGL 188 (339)
Q Consensus 135 ~~~-----~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~-------------------~l~~~l~~~~--~~~~~~~ 188 (339)
... .|+. ++|++++|.+|+|.|| .||+|.++++ ++.+++.... .+.|...
T Consensus 339 LIa~g~~~sP~~-~aDvvt~TTHKtLrGP---rGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGph 414 (586)
T PLN02271 339 LVAAKECVNPFD-YCDIVTSTTHKSLRGP---RGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPH 414 (586)
T ss_pred ccccCcCCCCCc-CCcEEEeCCcccCCCC---CceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChh
Confidence 652 3444 5899999999999976 4678877642 1222222111 0112222
Q ss_pred ChHHHHHH--Hh--chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHH-
Q 019543 189 APFDCWIC--LR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA- 263 (339)
Q Consensus 189 ~~~~a~~~--~~--~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~- 263 (339)
+...++++ +. ....+.+..+|..+|++.|++.|.+. +++.+. + ....+++.+.+.+..
T Consensus 415 n~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~--g--------------gTdnHlvLvDl~~~g~ 477 (586)
T PLN02271 415 NNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVT--G--------------GTDNHLLLWDLTTLGL 477 (586)
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEee--C--------------CCCcceeeecCcccCC
Confidence 22222222 22 22345778888899999999999876 444443 1 124567777763221
Q ss_pred HHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 264 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 264 ~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
......+.|...+|.++--. .|.-. ..+. ....+.| .+.+.|..++.+|++.+.+-|.++++
T Consensus 478 ~G~~ae~~Le~~~I~~Nkn~------iP~d~--~~~~-psGiRiG-T~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 478 TGKNYEKVCEMCHITLNKTA------IFGDN--GTIS-PGGVRIG-TPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CHHHHHHHHHHcCeEecccc------CCCCC--CCCC-CCccccc-CHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 12233334445566555210 11100 0000 0001111 11233444566778888888877775
No 215
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.62 E-value=1.7e-14 Score=137.36 Aligned_cols=227 Identities=15% Similarity=0.168 Sum_probs=145.8
Q ss_pred CchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 54 NPTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.+...+|++.++++++.+ ++++++++++++..++ .+++|||+|++++|.|........
T Consensus 63 ~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~ 142 (366)
T PRK01533 63 DGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLD 142 (366)
T ss_pred CCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHH
Confidence 344678999999999854 4555555578887654 478999999999998876543322
Q ss_pred -------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc----Ccc----cCCCeEEEeccc
Q 019543 112 -------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS----RPL----ELGADIVMHSAT 152 (339)
Q Consensus 112 -------------------------------~~I~~la~~~g~~livD~a~a~g~~~----~~~----~~~~Di~~~S~s 152 (339)
++|+++|++++ ++|+||+|...... ..+ ...--|++.|||
T Consensus 143 ~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfS 221 (366)
T PRK01533 143 EISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFS 221 (366)
T ss_pred HHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCch
Confidence 55666666666 67789998532211 111 112358999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
|.++.+|.+ .||++++ +++++.++..+ ..+.++.+...++...|+. .....+...++.+++.+.++.+ ++.
T Consensus 222 K~~~l~GlR-iG~~i~~-~~~~~~l~~~~--~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~- 295 (366)
T PRK01533 222 KAYGLASFR-VGYAVGH-EELIEKLNVVR--LPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIP- 295 (366)
T ss_pred HHhcChHHH-HhHHhCC-HHHHHHHHHhc--CCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-
Confidence 999977755 5677776 47888777654 2355666665555555433 2333444556667777777765 322
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 309 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~ 309 (339)
+ +| +.+..+++.+.+ ..++.+.|...||.|+. .
T Consensus 296 ~-~~----------------~~~nf~~~~~~~---~~~~~~~l~~~GI~Vr~---------~------------------ 328 (366)
T PRK01533 296 F-YQ----------------SQTNFIFLPVEN---GGEIYEACAHAGFIIRP---------F------------------ 328 (366)
T ss_pred c-CC----------------CcCcEEEEeCCC---HHHHHHHHHHCCcEEcc---------C------------------
Confidence 1 12 246678887743 34677777778887762 0
Q ss_pred CCCeEEEEecc-CCHHHHHHHHHHHHh
Q 019543 310 TEDLVRISVGI-EDVNDLISDLDKALR 335 (339)
Q Consensus 310 ~~~~lRisvg~-e~~~~li~~l~~al~ 335 (339)
++.+|||+|. ++.+.+++.|.+.++
T Consensus 329 -~~~iRis~~~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 329 -PNGVRITVGTREQNEGVISVLQQHFE 354 (366)
T ss_pred -CCceEEeCCCHHHHHHHHHHHHHHHH
Confidence 1459999996 445666666666553
No 216
>PRK07908 hypothetical protein; Provisional
Probab=99.62 E-value=1.4e-13 Score=130.17 Aligned_cols=232 Identities=16% Similarity=0.165 Sum_probs=145.3
Q ss_pred hHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH----------------------
Q 019543 56 TRDALESLLAKLDKA--DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS---------------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~---------------------- 111 (339)
...+|++.+++++|. ++.++++++++|+..++. ++||+ +++..|.|......++
T Consensus 59 g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~-l~~~~-viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l 136 (349)
T PRK07908 59 DERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR-LRPRR-AAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV 136 (349)
T ss_pred chHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh-cCCCe-EEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHh
Confidence 467899999999875 356666677899886666 67865 4556787765443222
Q ss_pred ----------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--cc---cCCCeEEEeccccccccCCCceEE
Q 019543 112 ----------------------RKIAEMAHAHGALLLVDNSIMSPVLSR--PL---ELGADIVMHSATKFIAGHSDVMAG 164 (339)
Q Consensus 112 ----------------------~~I~~la~~~g~~livD~a~a~g~~~~--~~---~~~~Di~~~S~sK~l~g~~~~~gG 164 (339)
++|.++|+ ++.++|+||+|+.-+... .+ ...-.+++.||||.++.+| .+.|
T Consensus 137 ~~~~~~i~l~np~NPTG~~~~~~~l~~l~~-~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~G-lRiG 214 (349)
T PRK07908 137 PDDADLVVIGNPTNPTSVLHPAEQLLALRR-PGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAG-LRVG 214 (349)
T ss_pred ccCCCEEEEcCCCCCCCCCcCHHHHHHHHh-cCCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCcc-ceee
Confidence 88999996 588899999986422211 11 1122478889999998666 4567
Q ss_pred EEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHh-----chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCC
Q 019543 165 VLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR-----GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 239 (339)
Q Consensus 165 ~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~-----~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~ 239 (339)
+++++ +++++.++..... +.+++.....+.. ..+.+...+++..++.+++.+.|+++ +++ +..|
T Consensus 215 ~~~~~-~~~~~~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p------ 283 (349)
T PRK07908 215 YALGA-PDVLARLTRGRAH--WPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GAR-VVDP------ 283 (349)
T ss_pred eeecC-HHHHHHHHhcCCC--CCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcE-eccC------
Confidence 88876 4677776654322 3334433222222 12334445556667777788888876 443 2222
Q ss_pred chHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEec
Q 019543 240 GHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG 319 (339)
Q Consensus 240 ~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg 319 (339)
..+..+++.+.+ ...+.+.|++.|+.++.|..+. +..++.+|||++
T Consensus 284 ----------~~g~~~~~~~~~---~~~~~~~l~~~gI~v~~g~~f~---------------------~~~~~~vRis~~ 329 (349)
T PRK07908 284 ----------AAAPFVLVRVPD---AELLRKRLRERGIAVRRGDTFP---------------------GLDPDYLRLAVR 329 (349)
T ss_pred ----------CCceEEEEECCc---HHHHHHHHHhCCEEEEECCCCC---------------------CCCCCeEEEEeC
Confidence 146788888764 2456666777788887665321 013478999998
Q ss_pred c-CCHHHHHHHHHHHHhc
Q 019543 320 I-EDVNDLISDLDKALRT 336 (339)
Q Consensus 320 ~-e~~~~li~~l~~al~~ 336 (339)
. ++.+.+++.|.+.+.+
T Consensus 330 ~~~~~~~l~~al~~~~~~ 347 (349)
T PRK07908 330 PRAEVPVLVQALAEILKA 347 (349)
T ss_pred CCccHHHHHHHHHHHHhc
Confidence 6 3566666666655543
No 217
>PRK09105 putative aminotransferase; Provisional
Probab=99.62 E-value=2.9e-14 Score=135.98 Aligned_cols=200 Identities=16% Similarity=0.160 Sum_probs=125.5
Q ss_pred CchHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.+...+|++.+++++|. +++++++++++++..++ .++++||+|++++|.|.......+
T Consensus 77 ~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~ 156 (370)
T PRK09105 77 LELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDV 156 (370)
T ss_pred CchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCH
Confidence 34477899999999874 46777777789998654 578999999999999876643322
Q ss_pred ----------------------------HHHHHHHHH--cCCEEEEeCCcCCCCCc-Ccc---cCCCe-EEEeccccccc
Q 019543 112 ----------------------------RKIAEMAHA--HGALLLVDNSIMSPVLS-RPL---ELGAD-IVMHSATKFIA 156 (339)
Q Consensus 112 ----------------------------~~I~~la~~--~g~~livD~a~a~g~~~-~~~---~~~~D-i~~~S~sK~l~ 156 (339)
++|.++++. +|++||+||+|...... ... ....+ +++.||||.+|
T Consensus 157 ~~l~~~~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g 236 (370)
T PRK09105 157 KAMLAADPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYG 236 (370)
T ss_pred HHHHhcCCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhc
Confidence 556555543 58999999999532111 111 11223 77789999999
Q ss_pred cCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch---hhHHHHHHHHHHHHHHHHHHHhCCCCceEEecC
Q 019543 157 GHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 233 (339)
Q Consensus 157 g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l---~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p 233 (339)
.+|.+ .||+++++ ++++.+... .....+......+...+ +.++...++..++.+++.+.|+.+ ++. + +|
T Consensus 237 ~~GlR-iG~~v~~~-~~i~~l~~~---~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~~ 308 (370)
T PRK09105 237 MAGMR-LGLAAARP-DLLAKLARF---GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYK-C-TP 308 (370)
T ss_pred CCccc-eeeeecCH-HHHHHHHhc---CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCC-c-CC
Confidence 87754 56887764 677766554 12223333333333333 223444556667778888888875 332 1 11
Q ss_pred CCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeec
Q 019543 234 GLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITV 279 (339)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v 279 (339)
..++.+.+.++. ...+|.+.|...|+.+
T Consensus 309 ----------------~~~~f~~~~~~~--~~~~l~~~L~~~gI~v 336 (370)
T PRK09105 309 ----------------SQANCFMVDVKR--PAKAVADAMAKQGVFI 336 (370)
T ss_pred ----------------CCCcEEEEeCCC--CHHHHHHHHHHCCcEE
Confidence 134556565542 2356777776667766
No 218
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.62 E-value=6.3e-14 Score=134.84 Aligned_cols=235 Identities=21% Similarity=0.199 Sum_probs=145.5
Q ss_pred CCCCchHHHHHHHHHhHhCC---CeEEEcCcHHHHHHHHHH-hcCCC-CEEEEcCCCccchH------------------
Q 019543 51 RSGNPTRDALESLLAKLDKA---DRALCFTSGMAALAAVTH-LLGTG-EEIVAGDDLYGGTD------------------ 107 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~g~---~~~l~~~sG~~A~~~il~-ll~~G-D~Vi~~~~~y~~~~------------------ 107 (339)
++.++...+|+++|+++++. +.+++++||++|+..++. +..+| +.|+..++.|++..
T Consensus 81 ~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 160 (398)
T PRK03244 81 LFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEP 160 (398)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCC
Confidence 44566778999999999874 478889999999986543 33355 45555555665431
Q ss_pred -------------HHHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----
Q 019543 108 -------------RLLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRP----- 139 (339)
Q Consensus 108 -------------~~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~----- 139 (339)
..++ ++|.++|++||+++|+||+|. .|..+..
T Consensus 161 ~~~~~~~~~~~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~ 240 (398)
T PRK03244 161 LPGGVEHVPYGDVDALAAAVDDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQH 240 (398)
T ss_pred CCCCceEeCCCCHHHHHHhhcCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhh
Confidence 0011 699999999999999999985 2221211
Q ss_pred ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHH
Q 019543 140 LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKI 217 (339)
Q Consensus 140 ~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l 217 (339)
.....|++ +++|++++ | ...|++++++ ++.+.+...........+|..++++...|+.+. ...++.++..+++
T Consensus 241 ~~~~pDi~--t~sK~l~~-G-~~ig~~~~~~-~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l 315 (398)
T PRK03244 241 DGVTPDVV--TLAKGLGG-G-LPIGACLAFG-PAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQL 315 (398)
T ss_pred hCCCCCEE--EEchhhhC-C-cccEEEEEcH-HHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 12235754 67999994 4 3355666664 566655432222345567777777776666442 3455566667778
Q ss_pred HHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCC
Q 019543 218 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHA 297 (339)
Q Consensus 218 ~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~ 297 (339)
.+.|++.+ +|.... .++.|.++++++... .+.++.+.+...|+.++..
T Consensus 316 ~~~L~~~~------~~~~~~----------v~g~g~~~~i~~~~~-~~~~~~~~l~~~Gv~~~~~--------------- 363 (398)
T PRK03244 316 RAGIEALG------HPLVDH----------VRGRGLLLGIVLTAP-VAKAVEAAAREAGFLVNAV--------------- 363 (398)
T ss_pred HHHHHhcC------CCceee----------EeeccEEEEEEEecc-HHHHHHHHHHHCCeEEeec---------------
Confidence 88887642 111000 134678899988432 4567888887777655420
Q ss_pred CCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 298 SIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 298 ~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
..+.||+++.+..+++.++.+.++|
T Consensus 364 ------------~~~~iR~~p~~~~t~~~i~~~~~~l 388 (398)
T PRK03244 364 ------------APDVIRLAPPLIITDAQVDAFVAAL 388 (398)
T ss_pred ------------CCCEEEEECCCcCCHHHHHHHHHHH
Confidence 1257999987744444444444444
No 219
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.61 E-value=7.7e-14 Score=132.88 Aligned_cols=228 Identities=13% Similarity=0.126 Sum_probs=141.6
Q ss_pred chHHHHHHHHHhHh----C----CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 55 PTRDALESLLAKLD----K----ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~----g----~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
+....|++.+++++ | .+++++++++++++..++ .+++|||.|+++.|.|........
T Consensus 65 ~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~ 144 (368)
T PRK03317 65 RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAAD 144 (368)
T ss_pred CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCC
Confidence 34567888888876 3 245666666688888655 478999999999998876543221
Q ss_pred -----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCc--cc----CCCeEEEe
Q 019543 112 -----------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRP--LE----LGADIVMH 149 (339)
Q Consensus 112 -----------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~--~~----~~~Di~~~ 149 (339)
+++.++++.++++||+||+|+.... +.+ .. ..-.+++.
T Consensus 145 ~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~ 224 (368)
T PRK03317 145 FTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSR 224 (368)
T ss_pred CCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEE
Confidence 8899999999999999999974321 111 11 11237889
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCCC
Q 019543 150 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPR 226 (339)
Q Consensus 150 S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~~ 226 (339)
||||.+|.+| .+.|+++++ +++++.++..+ .....++...+++...++ .+.+++++..++.+.+.+.|+.+ +
T Consensus 225 SfSK~~g~~G-lRiG~~~~~-~~~~~~l~~~~--~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 299 (368)
T PRK03317 225 TMSKAFAFAG-GRLGYLAAA-PAVVDALRLVR--LPYHLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-G 299 (368)
T ss_pred echhhhccch-hhhhhhhCC-HHHHHHHHhcC--CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-C
Confidence 9999998665 455788776 46777776543 234556665554444443 33444555666677788888765 3
Q ss_pred ceEEecCCCCCCCchHhHhhhcCCCcceEEE-eeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHH
Q 019543 227 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 305 (339)
Q Consensus 227 i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~-~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~ 305 (339)
+. + .+ +.++.+.+ .+. ...++.+.|.+.|+.++..+
T Consensus 300 ~~-~-~~----------------~~~~~~~~~~~~---~~~~~~~~l~~~Gv~v~~~~---------------------- 336 (368)
T PRK03317 300 LR-V-AP----------------SDANFVLFGRFA---DRHAVWQGLLDRGVLIRDVG---------------------- 336 (368)
T ss_pred CE-e-CC----------------CCCcEEEEeccC---CHHHHHHHHHHCCEEEEeCC----------------------
Confidence 32 1 11 12344433 333 23567777766777664210
Q ss_pred hCCCCCCeEEEEeccC-CHHHHHHHHHHHH
Q 019543 306 ARGLTEDLVRISVGIE-DVNDLISDLDKAL 334 (339)
Q Consensus 306 ~~g~~~~~lRisvg~e-~~~~li~~l~~al 334 (339)
.++.+||+++.. +.+.+++.|.+.+
T Consensus 337 ----~~~~iRi~~~~~~~~~~~~~~l~~~~ 362 (368)
T PRK03317 337 ----IPGWLRVTIGTPEENDAFLAALAEVL 362 (368)
T ss_pred ----CCCeEEEecCCHHHHHHHHHHHHHHH
Confidence 135799999853 2344455554444
No 220
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.61 E-value=1.2e-13 Score=133.76 Aligned_cols=249 Identities=15% Similarity=0.117 Sum_probs=142.3
Q ss_pred chHHHHHHHHHhHhC----CCeEEEcCcHHHHHHHHHH-hcC-----CCCEEEE-cCCCccchHH---------------
Q 019543 55 PTRDALESLLAKLDK----ADRALCFTSGMAALAAVTH-LLG-----TGEEIVA-GDDLYGGTDR--------------- 108 (339)
Q Consensus 55 ~~~~~le~~la~~~g----~~~~l~~~sG~~A~~~il~-ll~-----~GD~Vi~-~~~~y~~~~~--------------- 108 (339)
++++++.+.+.+..| .+++++++++++|+..++. +++ +||.|++ .+|.|++...
T Consensus 78 ~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~ 157 (416)
T PRK09440 78 ELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNI 157 (416)
T ss_pred HHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeeccccc
Confidence 344444444444334 2456666666889876554 554 6999999 6887764321
Q ss_pred ---------------HH--H------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc----Cccc--
Q 019543 109 ---------------LL--S------------------------RKIAEMAHAHGALLLVDNSIMSPVLS----RPLE-- 141 (339)
Q Consensus 109 ---------------~~--~------------------------~~I~~la~~~g~~livD~a~a~g~~~----~~~~-- 141 (339)
.+ . ++|+++|++||++||+||+|+..... ....
T Consensus 158 ~~~~~~~~~~~~d~~~l~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~ 237 (416)
T PRK09440 158 ELLPEGQFKYHVDFEHLHIDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLW 237 (416)
T ss_pred ccccccccccCCCHHHcccCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccc
Confidence 00 0 88999999999999999999743211 1111
Q ss_pred CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh--H----HH-HHHHHHHHH
Q 019543 142 LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT--M----AL-RVEKQQDNA 214 (339)
Q Consensus 142 ~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~--~----~~-r~~~~~~~a 214 (339)
..--|+++||||. +.+| .+.||+++++ ++++.+.......+...+.+...++...++. + .. ..+..+++.
T Consensus 238 ~~~vI~~~SfSK~-~~pG-lRiG~~i~~~-~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~ 314 (416)
T PRK09440 238 NPNIILCMSLSKL-GLPG-VRCGIVIADE-EIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKV 314 (416)
T ss_pred cCCeEEEeccccc-CCCc-ceEEEEeCCH-HHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 1224888999996 6655 5567887764 7888887776655555565554444444332 1 11 122234445
Q ss_pred HHHHHHHhCC-CCceE-EecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCCcceeecccCCcccceecc
Q 019543 215 QKIAEFLASH-PRVKK-VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMP 291 (339)
Q Consensus 215 ~~l~~~L~~~-~~i~~-v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p 291 (339)
+.+.+.|+++ +++.. +..| ..|..+++.+.+ .....+|.+.+...|+.+..|..+. +
T Consensus 315 ~~~~~~L~~~l~~~~~~~~~p----------------~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~----~ 374 (416)
T PRK09440 315 QLAIALLRRYLPDEPCLIHKP----------------EGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFF----P 374 (416)
T ss_pred HHHHHHHHHhcccCCeEEecC----------------CCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhC----C
Confidence 5566666543 22211 1222 135677777753 2234567777777788888765431 1
Q ss_pred ccccCCCCCHHHHHhCCCCCCeEEEEecc--CCHHHHHHHHHHHHhc
Q 019543 292 CFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 336 (339)
Q Consensus 292 ~~~~h~~~~~~~~~~~g~~~~~lRisvg~--e~~~~li~~l~~al~~ 336 (339)
.. .. ..+...+.+|||++. ++.++.++.|.+++++
T Consensus 375 ~~--~~--------~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 375 GL--DE--------DWPHAHQCIRMNYVQDDEEIEKGIAILAEEVEK 411 (416)
T ss_pred CC--cc--------ccCCcCceEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 00 00 000013579999974 3344556666666654
No 221
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.60 E-value=7.7e-13 Score=121.47 Aligned_cols=253 Identities=20% Similarity=0.240 Sum_probs=164.3
Q ss_pred CCCCcccCCCCchHHHHHHHHHhHhCC---CeEEEcCcH-HHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH-------
Q 019543 44 NGPYDYTRSGNPTRDALESLLAKLDKA---DRALCFTSG-MAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS------- 111 (339)
Q Consensus 44 ~~~~~y~r~~~~~~~~le~~la~~~g~---~~~l~~~sG-~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~------- 111 (339)
.+.|.|+-......+++.+..++-++- ++.++|+.| .-++... -.+.+|||.|++..|.|++....++
T Consensus 53 hGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i 132 (388)
T COG1168 53 HGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVI 132 (388)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEE
Confidence 344778733344778888888877663 345555555 8888854 4589999999999999998776554
Q ss_pred ------------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--c--
Q 019543 112 ------------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR--P-- 139 (339)
Q Consensus 112 ------------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~--~-- 139 (339)
.+|.+||++||+.||.||.|+.-++.. .
T Consensus 133 ~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~ 212 (388)
T COG1168 133 ENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIP 212 (388)
T ss_pred eccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccc
Confidence 889999999999999999998654421 1
Q ss_pred ---c-cCCC--eEEEeccccccccCCCceEEEEEEcChhHHH-HHHHHHHhcCCCCChHHHH---HHH-hchhhHHHHHH
Q 019543 140 ---L-ELGA--DIVMHSATKFIAGHSDVMAGVLAVKGERLAK-ELYFLQNAEGSGLAPFDCW---ICL-RGVKTMALRVE 208 (339)
Q Consensus 140 ---~-~~~~--Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~-~l~~~~~~~~~~~~~~~a~---~~~-~~l~~~~~r~~ 208 (339)
+ +..+ -|.+.|.||+|+-.| ..++.++..++++.+ .++++.+......+.+... .+. .+=+-+++.++
T Consensus 213 ~a~ls~~~a~~~it~~saSKtFNlaG-L~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~ 291 (388)
T COG1168 213 FASLSERFADNSITLTSASKTFNLAG-LKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLE 291 (388)
T ss_pred hhhcChhhhcceEEEeeccccccchh-hhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHH
Confidence 1 1122 378888999999765 456666666666633 3444444444444544321 122 22233555566
Q ss_pred HHHHHHHHHHHHHhCC-CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC----HHHHHHHHccCCcceeecccCC
Q 019543 209 KQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS----LALSKHVVETTKYFSITVSFGS 283 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~-~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~----~~~~~~~~~~L~~~~i~v~~G~ 283 (339)
-+.+|.+++.+.+.++ |+|+ +.-|. .+.+.|+.+.. .....++. +.+.+++++.|.
T Consensus 292 yl~~N~~~~~~~l~~~~P~v~-v~~p~----------------gTYL~WLD~r~l~l~d~~l~~~l--l~~akVal~~G~ 352 (388)
T COG1168 292 YLKDNRDYVADFLNKHLPGVK-VTEPQ----------------GTYLAWLDCRELGLDDSELAEFL--LEEAKVALSPGS 352 (388)
T ss_pred HHHHHHHHHHHHHHhhCCCcE-EecCC----------------CceeeeeeccccCCChHHHHHHH--HHhhcEeccCCC
Confidence 6778999999999764 7775 33342 35788887532 12233333 345577788775
Q ss_pred cccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCC--HHHHHHHHHHHHhcC
Q 019543 284 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED--VNDLISDLDKALRTG 337 (339)
Q Consensus 284 ~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~--~~~li~~l~~al~~~ 337 (339)
.+.- -..+.+|+.++..- .++-++.|..||++.
T Consensus 353 ~FG~---------------------~g~gf~RlN~acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 353 TFGE---------------------EGSGFVRLNFACPRAILEEALERLKRALKKR 387 (388)
T ss_pred ccCc---------------------CCCceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence 4221 14589999998644 466677888888764
No 222
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.60 E-value=4.6e-14 Score=134.81 Aligned_cols=235 Identities=17% Similarity=0.199 Sum_probs=147.7
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHh---cCCCCEEEEcCCCccchH----------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTD---------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~l---l~~GD~Vi~~~~~y~~~~---------------------- 107 (339)
.++...+|++.+++..+.+.+++++||++|+.+++.+ ....++|++.+..|+|..
T Consensus 69 ~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~ 148 (377)
T PRK02936 69 TNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPG 148 (377)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCC
Confidence 4566777888887777767899999999999754442 233466777766665321
Q ss_pred ---------HHHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCcc-----cCC
Q 019543 108 ---------RLLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRPL-----ELG 143 (339)
Q Consensus 108 ---------~~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~~-----~~~ 143 (339)
..++ ++|.++|++||+++|+||+|. .|..+.+. ...
T Consensus 149 ~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~ 228 (377)
T PRK02936 149 FTHVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLD 228 (377)
T ss_pred ceEeCCCCHHHHHHhccCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCC
Confidence 0000 899999999999999999984 22222221 112
Q ss_pred CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH--HHHHHHHHHHHHHHHHHH
Q 019543 144 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 144 ~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~--~~r~~~~~~~a~~l~~~L 221 (339)
.|+ .|+||.+++ | ..+|++++++ ++.+.+.......+...+|+.++.+...|+.+ +..+++.+++.+++++.|
T Consensus 229 ~di--~t~sK~l~~-G-~~ig~v~~~~-~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L 303 (377)
T PRK02936 229 PDI--VTVAKGLGN-G-IPVGAMIGKK-ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKL 303 (377)
T ss_pred CcE--EEEcccccC-C-CccEEEEEcH-HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 364 469999993 4 4567888764 67666543222233456787777777666664 245566667777777777
Q ss_pred hCC-CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCC
Q 019543 222 ASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIP 300 (339)
Q Consensus 222 ~~~-~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~ 300 (339)
++. +++..+.. .++.|.++++.+.+. +..+.+.|.+.|+.+..+
T Consensus 304 ~~~~~~~~~~~~---------------v~~~g~~~~i~~~~~--~~~~~~~l~~~gv~v~~~------------------ 348 (377)
T PRK02936 304 QEELEHLECVKN---------------IRGKGLMIGIECTEE--VAPVIEQLREEGLLVLSA------------------ 348 (377)
T ss_pred HHHHhhCCcEEe---------------EeecceEEEEEecch--HHHHHHHHHHCCeEEecC------------------
Confidence 652 11111100 123567899988643 456777777666654211
Q ss_pred HHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 301 VEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 301 ~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+.|||++.+..+++.++.+.+.|++
T Consensus 349 ---------g~~~lRi~p~~~~~~~~i~~~i~~l~~ 375 (377)
T PRK02936 349 ---------GPNVIRLLPPLVVTKEELDQAVYLLKK 375 (377)
T ss_pred ---------CCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 236799998766666666666666653
No 223
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.60 E-value=5.8e-14 Score=135.13 Aligned_cols=236 Identities=19% Similarity=0.233 Sum_probs=147.8
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhc---------CCCCEEEEcCCCccchH----------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL---------GTGEEIVAGDDLYGGTD---------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll---------~~GD~Vi~~~~~y~~~~---------------- 107 (339)
.++...+|+++|+++.+.+.+++++||++|+...+.++ ...+.|++.+..|+|..
T Consensus 75 ~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~ 154 (397)
T TIGR03246 75 TNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGF 154 (397)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCC
Confidence 46778999999999998889999999999997554432 12355666555555431
Q ss_pred -------------------HHHH-------------------------HHHHHHHHHcCCEEEEeCCcCCCC--CcCc--
Q 019543 108 -------------------RLLS-------------------------RKIAEMAHAHGALLLVDNSIMSPV--LSRP-- 139 (339)
Q Consensus 108 -------------------~~~~-------------------------~~I~~la~~~g~~livD~a~a~g~--~~~~-- 139 (339)
..+. ++|.++|++||+++|+||+| +|. .+..
T Consensus 155 ~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a 233 (397)
T TIGR03246 155 APLPGGIKHAPYNDLAAAKALISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYA 233 (397)
T ss_pred CCCCCceEEeCCCCHHHHHHHhccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchh
Confidence 0000 99999999999999999998 333 1111
Q ss_pred ---ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH--HHHHHHHHHHH
Q 019543 140 ---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNA 214 (339)
Q Consensus 140 ---~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~--~~r~~~~~~~a 214 (339)
.....|++ +++|.+++ | ...|++++++ ++.+.+.......+...+|..++.++..|+.+ +...++.+++.
T Consensus 234 ~~~~gv~pDi~--t~~K~lgg-G-~pigav~~~~-~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~ 308 (397)
T TIGR03246 234 YMHYGVTPDIL--TSAKALGG-G-FPIGAMLTTT-EIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRH 308 (397)
T ss_pred hhhcCCCCCEE--EeehhhhC-C-cceeEEEEcH-HHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 12234665 78999974 4 4456676764 66666643222223345666666665555543 33456666777
Q ss_pred HHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--HHHHHHHHccCCcceeecccCCcccceeccc
Q 019543 215 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPC 292 (339)
Q Consensus 215 ~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~ 292 (339)
+++.+.|+++.. .++.+. ..++.|.++.+++.+ ...+.+|++.|...|+.+...
T Consensus 309 ~~l~~~L~~l~~----~~~~~~----------~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------- 364 (397)
T TIGR03246 309 DLFVDGLEKINA----RYNVFS----------EIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIA---------- 364 (397)
T ss_pred HHHHHHHHHHHh----cCCCeE----------eeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEeec----------
Confidence 888887776421 111100 013467788887743 234677888887766654310
Q ss_pred cccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 293 FMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 293 ~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.++.||+++.+.++++.++.+.++|+
T Consensus 365 -----------------g~~~lR~~p~~~~t~~~i~~~~~~l~ 390 (397)
T TIGR03246 365 -----------------GPNVVRFAPSLVISDDDIDEGLARFE 390 (397)
T ss_pred -----------------CCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 23579998877666665555555544
No 224
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.60 E-value=1e-13 Score=133.34 Aligned_cols=235 Identities=14% Similarity=0.155 Sum_probs=149.6
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhc----------CCC-CEEEEcCCCccchH--------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL----------GTG-EEIVAGDDLYGGTD-------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll----------~~G-D~Vi~~~~~y~~~~-------------- 107 (339)
.++...+|+++|+++.+.+.+++++||++|+.+.+.+. ++| ++|++.+..|+|..
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~ 159 (396)
T PRK04073 80 HSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKR 159 (396)
T ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCccccc
Confidence 55778899999999998889999999999997544322 134 77887766555421
Q ss_pred -----------------HHHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-
Q 019543 108 -----------------RLLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRP- 139 (339)
Q Consensus 108 -----------------~~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~- 139 (339)
..++ ++|.++|++||+++|+||+|. .|..+..
T Consensus 160 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~ 239 (396)
T PRK04073 160 GFGPMLPGIKKIPYGDLEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLF 239 (396)
T ss_pred CCCCCCCCceEeCCCCHHHHHHhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHH
Confidence 0000 789999999999999999986 3322211
Q ss_pred ----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHH--HHHHHHHHH
Q 019543 140 ----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDN 213 (339)
Q Consensus 140 ----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~ 213 (339)
.....|+++ +||.+++.+.. .|++++++ ++.+.+.........+.+|...+.++..|+.+. ...++..++
T Consensus 240 ~~~~~~~~pdi~~--~sK~lg~gg~~-ig~~~~~~-~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~ 315 (396)
T PRK04073 240 ACDWDNVTPDMYI--LGKALGGGVFP-ISCVAANR-DILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLEL 315 (396)
T ss_pred HhhhcCCCCCEEE--ecccccCCCCc-ceEEEEcH-HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 122346654 78999975444 56777764 666665432222334567777776767676542 234555566
Q ss_pred HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceecccc
Q 019543 214 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCF 293 (339)
Q Consensus 214 a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~ 293 (339)
.+++.+.|+++. +|.+.. .++.|.++.+.+.. .+.+|.+.|.+.|+.+. |.
T Consensus 316 ~~~l~~~L~~l~------~~~i~~----------~~~~g~~~~~~~~~--~~~~~~~~l~~~Gv~~~----------~~- 366 (396)
T PRK04073 316 GEYFKEQLKEID------NPMIKE----------VRGRGLFIGVELNE--PARPYCEALKEEGLLCK----------ET- 366 (396)
T ss_pred HHHHHHHHHhhc------CCcccc----------eecceEEEEEEecc--hHHHHHHHHHHCCeEEe----------cC-
Confidence 777888777642 111100 13457788887753 34567777766666543 10
Q ss_pred ccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 294 MSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 294 ~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.++.|||++.+..+++.++.+.++|++
T Consensus 367 ----------------~~~~iRi~p~l~~t~e~i~~~~~~l~~ 393 (396)
T PRK04073 367 ----------------HETVIRFAPPLVITKEELDWAFEKIKA 393 (396)
T ss_pred ----------------CCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 236799997766666666666666654
No 225
>PRK07505 hypothetical protein; Provisional
Probab=99.60 E-value=2.3e-13 Score=131.15 Aligned_cols=236 Identities=17% Similarity=0.113 Sum_probs=138.1
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHh-----cCCCC-EEEEcCCCccchHH------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL-----LGTGE-EIVAGDDLYGGTDR------------------ 108 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~l-----l~~GD-~Vi~~~~~y~~~~~------------------ 108 (339)
.++..++||++|+++++. ++++++||+.|+..++.+ ..+|+ .|++.+..|++...
T Consensus 89 ~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~ 167 (402)
T PRK07505 89 RSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHN 167 (402)
T ss_pred hhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCC
Confidence 456789999999999998 899999999998754432 12233 25455544443321
Q ss_pred -------HHH---------------------HHHHHHHHHcCCEEEEeCCcCCCCC---cCc-----cc---CCCeEEEe
Q 019543 109 -------LLS---------------------RKIAEMAHAHGALLLVDNSIMSPVL---SRP-----LE---LGADIVMH 149 (339)
Q Consensus 109 -------~~~---------------------~~I~~la~~~g~~livD~a~a~g~~---~~~-----~~---~~~Di~~~ 149 (339)
.+. ++|.++|++||++||+||+|+.+.+ +.. .. ....+++.
T Consensus 168 d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~ 247 (402)
T PRK07505 168 DLDALEDICKTNKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAA 247 (402)
T ss_pred CHHHHHHHHhcCCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEE
Confidence 010 8999999999999999999864322 111 11 12247778
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHHHHHHh--cCCCCChHHHHHHHhchhhH-----HHHHHHHHHHHHHHHHHHh
Q 019543 150 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 150 S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--~~~~~~~~~a~~~~~~l~~~-----~~r~~~~~~~a~~l~~~L~ 222 (339)
|+||.+++. ||+++++++++.+.++..... ++..+++..++.+...++.+ .++.++..++.+.+.+.+.
T Consensus 248 s~sK~~~~~----Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 323 (402)
T PRK07505 248 SLGKAFGAS----GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIP 323 (402)
T ss_pred echhhhhcc----CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHH
Confidence 999999853 577766555677777654322 23345555554444444422 2223333333333322221
Q ss_pred CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHH
Q 019543 223 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 302 (339)
Q Consensus 223 ~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~ 302 (339)
. +. . .....+.++.+++.+.+.++.+.|.+.|+.++... .|.. +
T Consensus 324 ~---------~~-~------------g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~p~~------~-- 367 (402)
T PRK07505 324 T---------EQ-S------------GSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVF------FPVV------A-- 367 (402)
T ss_pred h---------cC-C------------CCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeec------CCCC------C--
Confidence 1 00 0 11234445555554456778888888788776431 1211 0
Q ss_pred HHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 303 VRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 303 ~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..++.|||++++..+++.++.+.++|+
T Consensus 368 ------~~~~~lRi~~~~~~t~eei~~~~~~l~ 394 (402)
T PRK07505 368 ------KGRAGLRIMFRASHTNDEIKRLCSLLK 394 (402)
T ss_pred ------CCCceEEEecCccCCHHHHHHHHHHHH
Confidence 123679999987666666666655554
No 226
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.59 E-value=9.8e-14 Score=133.79 Aligned_cols=237 Identities=16% Similarity=0.196 Sum_probs=147.3
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhc---------CCCCEEEEcCCCccchHH---------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL---------GTGEEIVAGDDLYGGTDR--------------- 108 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll---------~~GD~Vi~~~~~y~~~~~--------------- 108 (339)
.++...+|+++|+++.+.+.+++++||+.|+...+.++ ...+.|++.+..|+|...
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~ 159 (403)
T PRK05093 80 TNEPALRLAKKLIDATFAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGF 159 (403)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcC
Confidence 35667799999999988889999999999997544332 123456666665655310
Q ss_pred --------------------HHH-------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCcc--
Q 019543 109 --------------------LLS-------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRPL-- 140 (339)
Q Consensus 109 --------------------~~~-------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~~-- 140 (339)
.+. ++|+++|++||+++|+||+|. .+..+...
T Consensus 160 ~~~~~~~~~~~~~d~~~l~~~l~~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~ 239 (403)
T PRK05093 160 GPKPADITHVPFNDLAAVKAVIDDHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAY 239 (403)
T ss_pred CCCCCCcEEeCCCCHHHHHHHhcCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhh
Confidence 000 899999999999999999986 22222221
Q ss_pred ---cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH--HHHHHHHHHHHH
Q 019543 141 ---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQ 215 (339)
Q Consensus 141 ---~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~--~~r~~~~~~~a~ 215 (339)
....| +.|+||++++ | ...|++++++ ++.+.+...........+|..++.+...|+.+ +...++.+++.+
T Consensus 240 ~~~~~~pd--i~s~sK~l~~-G-~rig~vv~~~-~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~ 314 (403)
T PRK05093 240 MHYGVTPD--ILTSAKALGG-G-FPIGAMLTTA-EIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQ 314 (403)
T ss_pred hhcCCCCC--EEEecccccC-C-cceEEEEEcH-HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 11235 4689999993 4 4567777764 66666653222233455677666665555443 234566677788
Q ss_pred HHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccCCcceeecccCCcccceecccc
Q 019543 216 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCF 293 (339)
Q Consensus 216 ~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~ 293 (339)
++.+.|+++.. .++... . .++.|.++++.+.+. ..+.+|++.|...|+.+..+
T Consensus 315 ~l~~~L~~~~~----~~~~~~-~---------~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~----------- 369 (403)
T PRK05093 315 RFVDGLQKINQ----KYGVFS-E---------IRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVA----------- 369 (403)
T ss_pred HHHHHHHHHHh----hCCCeE-e---------EeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecC-----------
Confidence 88888876421 011000 0 123567888887432 24567888876666654311
Q ss_pred ccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 294 MSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 294 ~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..+.+|+++.+...++.++.+.+.|+
T Consensus 370 ----------------g~~~lRl~~~~~~~~~~i~~~~~~l~ 395 (403)
T PRK05093 370 ----------------GPDVLRFAPSLVIEEADIDEGLARFE 395 (403)
T ss_pred ----------------CCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 23679998887755555555555544
No 227
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.59 E-value=7.5e-14 Score=134.74 Aligned_cols=237 Identities=16% Similarity=0.182 Sum_probs=147.4
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhc---------CCCCEEEEcCCCccchHH---------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL---------GTGEEIVAGDDLYGGTDR--------------- 108 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll---------~~GD~Vi~~~~~y~~~~~--------------- 108 (339)
.++...+|+++|+++.+.+.+++++||++|+...+.+. .+...|+..+..|+|...
T Consensus 79 ~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~ 158 (406)
T PRK12381 79 TNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDF 158 (406)
T ss_pred CCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCC
Confidence 46678899999999988889999999999997544332 245677775555544320
Q ss_pred ----------------HHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCcc--
Q 019543 109 ----------------LLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRPL-- 140 (339)
Q Consensus 109 ----------------~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~~-- 140 (339)
.++ ++|.++|++||+++|+||+|. .|..+...
T Consensus 159 ~~~~~~~~~~~~~d~~~l~~~l~~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~ 238 (406)
T PRK12381 159 APLPPDIRHAAYNDLNSASALIDDQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAY 238 (406)
T ss_pred CCCCCCeeEeCCCCHHHHHHhccCCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhh
Confidence 000 999999999999999999982 22222221
Q ss_pred ---cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHH--HHHHHHHHHHH
Q 019543 141 ---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQ 215 (339)
Q Consensus 141 ---~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~ 215 (339)
....|+ .|++|.+++ | ...|++++++ ++.+.+.......+...+|+.++.+...|+.+. ..+++.+++.+
T Consensus 239 ~~~~v~pDi--~t~sK~l~g-G-~~ig~~~~~~-~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~ 313 (406)
T PRK12381 239 MHYGVTPDV--LTTAKALGG-G-FPIGAMLTTE-KCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHD 313 (406)
T ss_pred HhhCCCCCE--EEehhhhhC-C-CceEEEEEcH-HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 123465 589999984 4 4566777764 676666432222234567777666666555542 34566667777
Q ss_pred HHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccCCcceeecccCCcccceecccc
Q 019543 216 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCF 293 (339)
Q Consensus 216 ~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~ 293 (339)
++.+.|+++.. .++.. . ..++.|.++++.+.+. ..+..+.+.+++.|+.+...
T Consensus 314 ~l~~~L~~l~~----~~~~~-~---------~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~----------- 368 (406)
T PRK12381 314 WFVERLNTINA----RYGLF-S---------EIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA----------- 368 (406)
T ss_pred HHHHHHHHHHh----hCCCE-E---------EEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC-----------
Confidence 77777765421 01110 0 0134677888887542 34567777787777654310
Q ss_pred ccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 294 MSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 294 ~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.++.|||++.+..+++.|+.+.++|+
T Consensus 369 ----------------g~~~lRl~p~~~~t~~~i~~~~~~l~ 394 (406)
T PRK12381 369 ----------------GPNVVRFAPALNISEEEITTGLDRFA 394 (406)
T ss_pred ----------------CCCEEEEeCCccCCHHHHHHHHHHHH
Confidence 22579999887555555554444443
No 228
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.59 E-value=4.6e-13 Score=129.06 Aligned_cols=210 Identities=15% Similarity=0.116 Sum_probs=126.7
Q ss_pred chHHHHHHHHHhHh---C--CCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHH----------------H--
Q 019543 55 PTRDALESLLAKLD---K--ADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLL----------------S-- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~---g--~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~----------------~-- 111 (339)
+....|++.+|+++ + .+++++++++++++..+..++.+||+|++++|.|......+ +
T Consensus 75 ~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 154 (402)
T TIGR03542 75 QGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRLQSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKIT 154 (402)
T ss_pred CCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEE
Confidence 44567888888864 2 34566666668888776667799999999999876443210 1
Q ss_pred -----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc---cC-
Q 019543 112 -----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL---EL- 142 (339)
Q Consensus 112 -----------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~---~~- 142 (339)
++|+++|++||++||+||+|+...... ++ ..
T Consensus 155 ~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~ 234 (402)
T TIGR03542 155 YLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGA 234 (402)
T ss_pred EeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCC
Confidence 889999999999999999997433211 11 11
Q ss_pred -CCeEEEeccccccccCCCceEEEEEEcChhHH----HHHH-HH---HHhcCCCCChHHHHHHHhch-----hhHHHHHH
Q 019543 143 -GADIVMHSATKFIAGHSDVMAGVLAVKGERLA----KELY-FL---QNAEGSGLAPFDCWICLRGV-----KTMALRVE 208 (339)
Q Consensus 143 -~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~----~~l~-~~---~~~~~~~~~~~~a~~~~~~l-----~~~~~r~~ 208 (339)
..-|++.||||.+|.+|. +.||+++++ +++ +.+. .+ ........+.+...++...+ +.+...++
T Consensus 235 ~~~vi~~~SfSK~~g~pGl-RiG~~i~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 312 (402)
T TIGR03542 235 KECAIEFRSFSKTAGFTGV-RLGWTVVPK-ELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAIS 312 (402)
T ss_pred cccEEEEecCccccCCCCc-ceEEEEecH-HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHH
Confidence 123778999999987774 456877765 454 1111 11 11112234444333222222 22333445
Q ss_pred HHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC-cceeecccCCc
Q 019543 209 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSV 284 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~-~~~i~v~~G~~ 284 (339)
...++.+.+.+.|+.. +++ + ++ ...+..+++.+.+.....+|++.+. ..|+.+..|..
T Consensus 313 ~~~~~~~~~~~~L~~~-~~~-~-~~---------------~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~ 371 (402)
T TIGR03542 313 YYMENARILRKALEAA-GFK-V-YG---------------GEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSG 371 (402)
T ss_pred HHHHHHHHHHHHHHhc-Cce-e-cC---------------CCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchh
Confidence 5567777788888775 332 1 11 1135577888754323456666653 56887776643
No 229
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.59 E-value=3.8e-13 Score=131.13 Aligned_cols=222 Identities=14% Similarity=0.101 Sum_probs=135.1
Q ss_pred eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------------------------------
Q 019543 72 RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------- 111 (339)
Q Consensus 72 ~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------- 111 (339)
+.++++++++|+..++ .++.|||.|+++.|.|++....+.
T Consensus 122 ~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~v 201 (447)
T PLN02607 122 RIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRV 201 (447)
T ss_pred HeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCe
Confidence 4666666688987544 578999999999998876432111
Q ss_pred ---------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-c----cc----C------CCeEEEecccccc
Q 019543 112 ---------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-P----LE----L------GADIVMHSATKFI 155 (339)
Q Consensus 112 ---------------------~~I~~la~~~g~~livD~a~a~g~~~~-~----~~----~------~~Di~~~S~sK~l 155 (339)
++|+++|++||+.+|+||+|+..++.. + .. . .--+++.|+||.|
T Consensus 202 k~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~f 281 (447)
T PLN02607 202 RGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDL 281 (447)
T ss_pred eEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcC
Confidence 789999999999999999997543321 1 10 1 1126789999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh-------hHHHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 156 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-------TMALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 156 ~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~-------~~~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
|.+| .+.|++++.++.+...++.... ++ ..+.....++...|+ .+....+++.++.+.+.+.|+.+ ++.
T Consensus 282 g~~G-lRvG~ivs~n~~l~~~~~~~~~-~~-~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~ 357 (447)
T PLN02607 282 GLPG-FRVGTIYSYNDKVVTTARRMSS-FT-LVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIE 357 (447)
T ss_pred CCCc-ceEEEEEEcCHHHHHHHHHHhh-cC-CCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCC
Confidence 8777 5567888755566666654432 22 223333332222222 12344555666777788888875 332
Q ss_pred EEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH------HHHHHHHccC-CcceeecccCCcccceeccccccCCCCCH
Q 019543 229 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL------ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPV 301 (339)
Q Consensus 229 ~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~------~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~~~~ 301 (339)
. .+ ...|..+|+.+... +...++++.+ +..|+.++.|..+ ++
T Consensus 358 ~--~~---------------~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f----~~---------- 406 (447)
T PLN02607 358 C--LK---------------GNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSC----HC---------- 406 (447)
T ss_pred c--cc---------------CCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCcccc----CC----------
Confidence 1 11 11355677776421 2234566555 4568888776532 11
Q ss_pred HHHHhCCCCCCeEEEEeccCC---HHHHHHHHHHHHh
Q 019543 302 EVRQARGLTEDLVRISVGIED---VNDLISDLDKALR 335 (339)
Q Consensus 302 ~~~~~~g~~~~~lRisvg~e~---~~~li~~l~~al~ 335 (339)
..++.+||+++..+ .++-+++|.++++
T Consensus 407 -------~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~ 436 (447)
T PLN02607 407 -------SEPGWFRVCFANMSEDTLEVALKRIHRFMD 436 (447)
T ss_pred -------CCCCEEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 13578999999633 3444566666654
No 230
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.59 E-value=2.4e-13 Score=131.02 Aligned_cols=237 Identities=14% Similarity=0.210 Sum_probs=150.9
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhc----------CC-CCEEEEcCCCccchH--------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL----------GT-GEEIVAGDDLYGGTD-------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll----------~~-GD~Vi~~~~~y~~~~-------------- 107 (339)
.++...+|+++|++++|.+.+++++||++|+...+.++ .+ .+.|++....|+|..
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~ 156 (401)
T TIGR01885 77 YNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRT 156 (401)
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccc
Confidence 56778999999999999889999999999997544321 23 456666655555420
Q ss_pred ---------------------HHHH----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCc
Q 019543 108 ---------------------RLLS----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLS 137 (339)
Q Consensus 108 ---------------------~~~~----------------------------~~I~~la~~~g~~livD~a~a-~g~~~ 137 (339)
..++ ++|.++|++||+++|+||+|. .|..+
T Consensus 157 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G 236 (401)
T TIGR01885 157 NFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTG 236 (401)
T ss_pred ccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc
Confidence 1111 899999999999999999983 22222
Q ss_pred Cc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHHH--HHHHH
Q 019543 138 RP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQ 210 (339)
Q Consensus 138 ~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~ 210 (339)
.. .....|+++ ++|.+++.+.. .|+++++ +++.+.++..........+|...+.+...|+.+.. ..++.
T Consensus 237 ~~~~~~~~~~~~di~~--~gK~l~~g~~~-ig~v~~~-~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~ 312 (401)
T TIGR01885 237 KLLCVDHENVKPDIVL--LGKALSGGVYP-VSAVLAD-DDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENA 312 (401)
T ss_pred hhhHHhhcCCCCCEEE--eeccccCCCCC-cEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHH
Confidence 22 123457664 67999864334 4566665 46766654321112334457666666666665532 34555
Q ss_pred HHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH---HHHHHHHccCCcceeecccCCcccc
Q 019543 211 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---ALSKHVVETTKYFSITVSFGSVKSL 287 (339)
Q Consensus 211 ~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~---~~~~~~~~~L~~~~i~v~~G~~~s~ 287 (339)
+++.+++.+.|++++. ..+.. .++.|.++.+.+++. ..+.+|.+.|.+.|+.+.
T Consensus 313 ~~~~~~~~~~L~~l~~-~~~~~---------------~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~------- 369 (401)
T TIGR01885 313 EKLGEIFRDQLKKLPK-PIITE---------------VRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAK------- 369 (401)
T ss_pred HHHHHHHHHHHHhccC-CceeE---------------EeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEE-------
Confidence 6667888888887631 00100 124678888877543 256788888877776543
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
|. .++.+||+..+..+++.|+.+.++|++
T Consensus 370 ---~~-----------------~~~~lRi~p~l~~t~~~i~~~l~~l~~ 398 (401)
T TIGR01885 370 ---PT-----------------HGNIIRLAPPLVITEEQLDEGLEIIKK 398 (401)
T ss_pred ---ec-----------------CCCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 10 236799998877777777777776654
No 231
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.58 E-value=5.2e-14 Score=135.23 Aligned_cols=208 Identities=17% Similarity=0.253 Sum_probs=129.0
Q ss_pred CCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcCCC-------CEEEEcCCCccchH----------------
Q 019543 52 SGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLGTG-------EEIVAGDDLYGGTD---------------- 107 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~~G-------D~Vi~~~~~y~~~~---------------- 107 (339)
+.++..++|+++++++.+.+++++++||++|+.+++. +..++ ++|++.++.|++..
T Consensus 78 ~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 157 (396)
T PRK02627 78 YYIEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGF 157 (396)
T ss_pred cCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccC
Confidence 4578899999999999999999999999999985443 32222 67887776664321
Q ss_pred ---------------HHHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCc---
Q 019543 108 ---------------RLLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRP--- 139 (339)
Q Consensus 108 ---------------~~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~--- 139 (339)
..++ ++|.++|++||+++|+||+|+ .+..+..
T Consensus 158 ~~~~~~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~ 237 (396)
T PRK02627 158 EPLVEGFIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAY 237 (396)
T ss_pred CCCCCCceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeee
Confidence 0000 899999999999999999986 3322211
Q ss_pred --ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHH--HHHHHHHHHHH
Q 019543 140 --LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQ 215 (339)
Q Consensus 140 --~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~ 215 (339)
.....|+ .||||.++ +| ...|++++++ ++++.+.......+...++..++.+...|+.+. ...++.+++.+
T Consensus 238 ~~~~~~pdi--~t~sK~~~-~G-~rig~~~~~~-~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~ 312 (396)
T PRK02627 238 QHYGIEPDI--MTLAKGLG-GG-VPIGAVLAKE-KVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGE 312 (396)
T ss_pred hhcCCCCCE--EEEcchhh-CC-cccEEEEEcH-HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 1122354 46899999 34 4556777764 566665432222345567777776666666442 23444555556
Q ss_pred HHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecc
Q 019543 216 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVS 280 (339)
Q Consensus 216 ~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~ 280 (339)
++.+.|++... .+|... ..++.|.++++.+.. ...+|++.|...|+.+.
T Consensus 313 ~~~~~l~~~~~----~~~~~~----------~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~ 361 (396)
T PRK02627 313 YLRAKLRELLE----KYPGIK----------EVRGLGLMIGIELDR--PAAEIVKKALEKGLLIN 361 (396)
T ss_pred HHHHHHHHHHH----hCCCee----------eeccCcEEEEEEecC--cHHHHHHHHHHCCeEEe
Confidence 66665554310 011110 012356788888732 34677777766676554
No 232
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.58 E-value=8.5e-14 Score=131.08 Aligned_cols=223 Identities=15% Similarity=0.167 Sum_probs=139.1
Q ss_pred CchHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
.+...+|++.++++++. ++.++++++++++..++..+ +||+|+++.|.|.......+
T Consensus 54 ~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~-~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~ 132 (337)
T PRK03967 54 HITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF-EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGE 132 (337)
T ss_pred CCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh-CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHH
Confidence 34567899999999984 35666666688887666545 89999999999875432221
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc---cc-CCCeEEEeccccccccCCC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP---LE-LGADIVMHSATKFIAGHSD 160 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~~~---~~-~~~Di~~~S~sK~l~g~~~ 160 (339)
++|.+++ ++|+++|+|++|........ .. ..--|++.||||.++.+|
T Consensus 133 ~l~~~~~~~~~v~~~~P~NPtG~~~~~~~l~~i~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~G- 210 (337)
T PRK03967 133 RIAEKAKNASAVFICSPNNPTGNLQPEEEILKVL-ETGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAG- 210 (337)
T ss_pred HHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHH-hcCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchh-
Confidence 8888998 47999999999964221111 11 112488899999998666
Q ss_pred ceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCC
Q 019543 161 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 237 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~ 237 (339)
.+.||+++++ ++++.++..... +..+.+...++...++ .+.++++...++.+.+.+.|..+ .+|
T Consensus 211 lRiG~iv~~~-~~i~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~---- 277 (337)
T PRK03967 211 IRAGYAIANE-EIIDALYRIKPP--FSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY------AYP---- 277 (337)
T ss_pred hhheeeecCH-HHHHHHHhhcCC--CCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC------cCC----
Confidence 4567888764 677777765432 3345544444443333 33444445555666677777653 122
Q ss_pred CCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEE
Q 019543 238 HPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 317 (339)
Q Consensus 238 ~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRis 317 (339)
+.+..+++.++ +.+.|...|+.++.+. . ...+.+||+
T Consensus 278 ------------~~~~~~~~~~~-------~~~~l~~~gi~v~~~~-------~-----------------~~~~~~Ri~ 314 (337)
T PRK03967 278 ------------SDANFLLLKLD-------AYDYLLENGIVVRKLS-------G-----------------RLEGHIRVT 314 (337)
T ss_pred ------------CCCcEEEEhHH-------HHHHHHHCCEEEEeCC-------C-----------------CCCCeEEEe
Confidence 13455665542 3445545577665221 0 123689999
Q ss_pred eccC-CHHHHHHHHHHHHh
Q 019543 318 VGIE-DVNDLISDLDKALR 335 (339)
Q Consensus 318 vg~e-~~~~li~~l~~al~ 335 (339)
++.. +.+.+++.|.+..+
T Consensus 315 ~~~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 315 VGKREENDEFIKALKEIKE 333 (337)
T ss_pred cCCHHHHHHHHHHHHHHHH
Confidence 9974 45666666665544
No 233
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.58 E-value=5.5e-14 Score=129.88 Aligned_cols=167 Identities=19% Similarity=0.117 Sum_probs=108.4
Q ss_pred CchHHHHHHHHHhHhCCCeEEE-cCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHH----------------------
Q 019543 54 NPTRDALESLLAKLDKADRALC-FTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRL---------------------- 109 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~-~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~---------------------- 109 (339)
....+++|+.+|+++|++++++ ++++++|+.+ +.++++|||+|+++++.|......
T Consensus 58 ~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~ 137 (294)
T cd00615 58 TGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIA 137 (294)
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCcC
Confidence 4468999999999999998887 5555788875 556899999999988765432211
Q ss_pred -----------HH----------------------HHHHHHHHHcCCEEEEeCCcCCCCCc------CcccCCCeEEEec
Q 019543 110 -----------LS----------------------RKIAEMAHAHGALLLVDNSIMSPVLS------RPLELGADIVMHS 150 (339)
Q Consensus 110 -----------~~----------------------~~I~~la~~~g~~livD~a~a~g~~~------~~~~~~~Di~~~S 150 (339)
++ ++|+++|++||+++++|++|+..... .....++|+++.|
T Consensus 138 ~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div~~S 217 (294)
T cd00615 138 GGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIVVQS 217 (294)
T ss_pred CCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCCcEEEEc
Confidence 10 99999999999999999999754211 1224588999999
Q ss_pred cccccccCCCceEEEEEEcCh-hHHHHHHHHHHhcC-CCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHHHHHh
Q 019543 151 ATKFIAGHSDVMAGVLAVKGE-RLAKELYFLQNAEG-SGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 151 ~sK~l~g~~~~~gG~v~~~~~-~l~~~l~~~~~~~~-~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~~L~ 222 (339)
++|+++|+ ..||++..+++ ...+++......+. +..+....+.+..+++. -.+++++..++++.++++++
T Consensus 218 ~hK~l~g~--~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 218 THKTLPAL--TQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred hhcccchH--hHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 99999854 34677766543 12233443333333 33332222212222221 24456666677777777664
No 234
>PLN02231 alanine transaminase
Probab=99.58 E-value=1.2e-12 Score=129.96 Aligned_cols=172 Identities=15% Similarity=0.183 Sum_probs=105.9
Q ss_pred chHHHHHHHHHhHhC----CCeEEEcCcHHHHHHHHHH-hc-CCCCEEEEcCCCccchHHHHH-----------------
Q 019543 55 PTRDALESLLAKLDK----ADRALCFTSGMAALAAVTH-LL-GTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g----~~~~l~~~sG~~A~~~il~-ll-~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
++++.+.+.+.+..| .+++++++++++|+..++. ++ .+||.|+++.|.|......+.
T Consensus 172 ~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~ 251 (534)
T PLN02231 172 GLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 251 (534)
T ss_pred HHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCC
Confidence 334444444443334 3567777777999987665 55 479999999998875542221
Q ss_pred ------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc--Cc---c-cC-
Q 019543 112 ------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS--RP---L-EL- 142 (339)
Q Consensus 112 ------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~--~~---~-~~- 142 (339)
++|+++|++||++||+||+|..-++. .+ + ..
T Consensus 252 ~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~ 331 (534)
T PLN02231 252 GLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVA 331 (534)
T ss_pred CCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHH
Confidence 88999999999999999999754331 11 1 00
Q ss_pred ---C------CeEEEeccccccc-cCCCceEEEEEEc--ChhHHHHHHHHHHhcCCCCChHH---HHHHHh-------ch
Q 019543 143 ---G------ADIVMHSATKFIA-GHSDVMAGVLAVK--GERLAKELYFLQNAEGSGLAPFD---CWICLR-------GV 200 (339)
Q Consensus 143 ---~------~Di~~~S~sK~l~-g~~~~~gG~v~~~--~~~l~~~l~~~~~~~~~~~~~~~---a~~~~~-------~l 200 (339)
+ .-|+++|+||.+. .+| .++||+++. ++++.+.+...... ..+.+... +..++. ..
T Consensus 332 ~~~g~~~~~~~vi~l~S~SK~~~g~pG-lRiGy~~~~~~~~~l~~~l~k~~~~-~~~s~~~~Q~~~~~~l~~p~~~~~~y 409 (534)
T PLN02231 332 RSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFTSDVREQIYKVASV-NLCSNISGQILASLVMSPPKPGDESY 409 (534)
T ss_pred hhhccccCCceEEEEeccCcccccCCc-cceEEEEEecCCHHHHHHHHHHHhh-hcCCChHHHHHHHHHhCCCCCCcchH
Confidence 1 1267889999874 344 567777652 45677777665432 22222222 222221 11
Q ss_pred hh----HHHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 201 KT----MALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 201 ~~----~~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
+. .+..++.+.++++.+.+.|+++++++
T Consensus 410 ~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~ 441 (534)
T PLN02231 410 ESYMAEKDGILSSLARRAKTLEDALNSLEGVT 441 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 11 11224567788888999999887764
No 235
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.57 E-value=2e-13 Score=131.76 Aligned_cols=166 Identities=15% Similarity=0.118 Sum_probs=119.4
Q ss_pred chHHHHHHHHHhHhCCC---eEEEcCcHH-HHHHHHHHhcC----CCCEEEEcCCCccchHHHHH---------------
Q 019543 55 PTRDALESLLAKLDKAD---RALCFTSGM-AALAAVTHLLG----TGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~~sG~-~A~~~il~ll~----~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
...++||+.+++++|.+ .++++++|+ .++.+++..++ +||+||++...+..+...+.
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~ 184 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDG 184 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecC
Confidence 46789999999999987 799999999 57775554444 69999998765443322111
Q ss_pred ----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc------CcccC-CC
Q 019543 112 ----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS------RPLEL-GA 144 (339)
Q Consensus 112 ----------------------------------------~~I~~la~~~g~~livD~a~a~g~~~------~~~~~-~~ 144 (339)
++|.++|++||+++++|+||+.+... ..... .+
T Consensus 185 ~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~Gra 264 (444)
T TIGR03531 185 DELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIKVGRV 264 (444)
T ss_pred cCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhccccccCC
Confidence 99999999999999999999865421 22233 36
Q ss_pred eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCC-CCCh-HHHHH--HHhchhhHHHHHHHHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS-GLAP-FDCWI--CLRGVKTMALRVEKQQDNAQKIAEF 220 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~-~~~~-~~a~~--~~~~l~~~~~r~~~~~~~a~~l~~~ 220 (339)
|++++|++|++..+++ ||+++++++++.+.++.. +.+. ..++ ..+++ ...+.+.+.+.++++.++++++.+.
T Consensus 265 d~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~--y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~ 340 (444)
T TIGR03531 265 DAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKS--YPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKEL 340 (444)
T ss_pred CeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHh--ccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987654 788888777777766543 1221 1122 22332 2345677888888888999999998
Q ss_pred HhCC
Q 019543 221 LASH 224 (339)
Q Consensus 221 L~~~ 224 (339)
|+++
T Consensus 341 L~~l 344 (444)
T TIGR03531 341 LQKL 344 (444)
T ss_pred HHHH
Confidence 8865
No 236
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.56 E-value=2.9e-13 Score=130.67 Aligned_cols=179 Identities=15% Similarity=0.090 Sum_probs=107.0
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-HHh------
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QNA------ 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~-~~~------ 183 (339)
++|.++|+++|+++++|++|+.|... +...+++|++++|.+|+++|+.+ ||+++.++ .. ..+... ...
T Consensus 191 ~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG--~~l~v~~~-~~-~~~~p~~~g~~~~~~~ 266 (406)
T TIGR01814 191 AAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPG--AGAFVHEK-HA-HTERPRLAGWWGHARP 266 (406)
T ss_pred HHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCC--eEEEEehh-hh-hhcCCCCCcccCCCCc
Confidence 99999999999999999999998653 33357899999999999975432 44444332 22 222110 000
Q ss_pred --------cC-------CCCChHHH-HHHHhchhhH-----HHHHHHHHHHHHHHHHHHhCC----CCceEEecCCCCCC
Q 019543 184 --------EG-------SGLAPFDC-WICLRGVKTM-----ALRVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEH 238 (339)
Q Consensus 184 --------~~-------~~~~~~~a-~~~~~~l~~~-----~~r~~~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~ 238 (339)
++ .+.++... +.+..+++.+ +...++..+..+++.+.|++. ++++. ..|. +
T Consensus 267 ~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i-~~~~---~ 342 (406)
T TIGR01814 267 TRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTI-ITPR---D 342 (406)
T ss_pred cccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEE-eCCC---C
Confidence 00 11222222 2222233332 334455566677777777664 23432 2221 1
Q ss_pred CchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe
Q 019543 239 PGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 318 (339)
Q Consensus 239 ~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv 318 (339)
+ ...+++++|.+. ....++.+.|...|+.+... .++.||+|+
T Consensus 343 ~---------~~r~~~v~~~~~--~~~~~~~~~L~~~gi~v~~~---------------------------~~~~iRiS~ 384 (406)
T TIGR01814 343 H---------AQRGCQLSLTHP--VPGKAVFQALIKRGVIGDKR---------------------------EPSVIRVAP 384 (406)
T ss_pred h---------hhcCCeEEEEec--CCHHHHHHHHHHCCEEEecc---------------------------CCCeEEEec
Confidence 1 114678888875 12345666666666654210 235799999
Q ss_pred -ccCCHHHHHHHHHHHHhc
Q 019543 319 -GIEDVNDLISDLDKALRT 336 (339)
Q Consensus 319 -g~e~~~~li~~l~~al~~ 336 (339)
+..++++.|+.+.++|++
T Consensus 385 ~~~~nt~~did~l~~~l~~ 403 (406)
T TIGR01814 385 VPLYNTFVDVYDAVNVLEE 403 (406)
T ss_pred hhccCCHHHHHHHHHHHHH
Confidence 578888889999998875
No 237
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.55 E-value=9.8e-14 Score=131.40 Aligned_cols=206 Identities=24% Similarity=0.241 Sum_probs=126.7
Q ss_pred CCchHHHHHH----HHHhHhCCC----eEEE-cCcHHHHHHHH-HHhcCCCCEEEEcCCCccchH---------------
Q 019543 53 GNPTRDALES----LLAKLDKAD----RALC-FTSGMAALAAV-THLLGTGEEIVAGDDLYGGTD--------------- 107 (339)
Q Consensus 53 ~~~~~~~le~----~la~~~g~~----~~l~-~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~--------------- 107 (339)
+....+++|+ ++.++|+++ .+-+ .-||+.|+.++ .+|++|||.|+..+...+|..
T Consensus 60 G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~ 139 (399)
T PF00464_consen 60 GCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASG 139 (399)
T ss_dssp STHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHH
T ss_pred CcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhccccccccccccccccccc
Confidence 4555666554 566799999 7766 55999999864 569999999998765433221
Q ss_pred HHHH-------------------------------------------HHHHHHHHHcCCEEEEeCCcC-----CCCCcCc
Q 019543 108 RLLS-------------------------------------------RKIAEMAHAHGALLLVDNSIM-----SPVLSRP 139 (339)
Q Consensus 108 ~~~~-------------------------------------------~~I~~la~~~g~~livD~a~a-----~g~~~~~ 139 (339)
..++ +++.++|++.|++|++|.+|- .|.+.+|
T Consensus 140 ~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P 219 (399)
T PF00464_consen 140 LYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNP 219 (399)
T ss_dssp HHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--G
T ss_pred ceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCc
Confidence 0000 999999999999999999993 5667788
Q ss_pred ccCCCeEEEeccccccccCCCceEEEEEEc-------------ChhHHHHHHHHHHhcCCCCChH---HHHHHH---hch
Q 019543 140 LELGADIVMHSATKFIAGHSDVMAGVLAVK-------------GERLAKELYFLQNAEGSGLAPF---DCWICL---RGV 200 (339)
Q Consensus 140 ~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~-------------~~~l~~~l~~~~~~~~~~~~~~---~a~~~~---~~l 200 (339)
++. +|++++|.+|+|.|| .||+|.++ ++++.+++.+.. +.+..-+|. .++++. ..+
T Consensus 220 ~~~-ADvvt~sThKtl~GP---rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~av-fP~~qg~~h~~~iaalAval~ea~ 294 (399)
T PF00464_consen 220 FPY-ADVVTGSTHKTLRGP---RGGIILTNKGSKNVDKKGKEIDEELAEKIDSAV-FPGLQGGPHMHRIAALAVALKEAL 294 (399)
T ss_dssp CCT-SSEEEEESSGGG-SS---S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHH-TTTT-SS--HHHHHHHHHHHHHHT
T ss_pred ccc-ceEEEeecccccccc---CceEEEEcCCccccCCcccccHHHHHHHhcccc-CCCcccCcchhHHHHHHHHHhccc
Confidence 886 999999999999976 58999998 456777776543 222222222 122222 112
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCCcceee
Q 019543 201 -KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSIT 278 (339)
Q Consensus 201 -~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~~~~i~ 278 (339)
..+.+..++..+|++.|++.|.+. +++.+. + ...++++.+.+.+. -...+..+.|...||.
T Consensus 295 ~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~--g--------------gTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~ 357 (399)
T PF00464_consen 295 SPEFKEYAKQVVKNAKALAEALQER-GFKVVT--G--------------GTDNHQVLVDLRSFGIDGKEAEKALEEAGII 357 (399)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGG--G--------------S-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEE--C--------------CCCCCeEEEEecccccchHHHHHHHHhcCee
Confidence 235778888899999999999986 343221 1 23578888887432 1233444455556666
Q ss_pred cc
Q 019543 279 VS 280 (339)
Q Consensus 279 v~ 280 (339)
++
T Consensus 358 vn 359 (399)
T PF00464_consen 358 VN 359 (399)
T ss_dssp -E
T ss_pred ec
Confidence 65
No 238
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.55 E-value=3.7e-13 Score=127.03 Aligned_cols=242 Identities=15% Similarity=0.200 Sum_probs=157.4
Q ss_pred ccCCCCchHHHHHHHHHhHhC-CC-eEEEcCcH-HHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------
Q 019543 49 YTRSGNPTRDALESLLAKLDK-AD-RALCFTSG-MAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 49 y~r~~~~~~~~le~~la~~~g-~~-~~l~~~sG-~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
+.|+-.+...+|++.+++++| .+ +.++...| .+.+..+. .++.|||.|++..++|.......+
T Consensus 51 ~~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~ 130 (356)
T COG0079 51 LNRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE 130 (356)
T ss_pred hccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc
Confidence 556667788999999999999 44 34454555 56666554 488999999999998864432111
Q ss_pred ----------------------------------HHHHHHHHHc--CCEEEEeCCcCCCCCcCcc---cCCC-eEEEecc
Q 019543 112 ----------------------------------RKIAEMAHAH--GALLLVDNSIMSPVLSRPL---ELGA-DIVMHSA 151 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~--g~~livD~a~a~g~~~~~~---~~~~-Di~~~S~ 151 (339)
++|.++++.. +.+||+|||+........+ ...- =+++-||
T Consensus 131 ~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTf 210 (356)
T COG0079 131 FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTF 210 (356)
T ss_pred cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEec
Confidence 6666666654 8899999999643221111 1122 3788899
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHh---chhhHHHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 152 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR---GVKTMALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 152 sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~---~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
||.+|-.| .+.|+.+++ +++++.++..+.-++ ++-...+++.. .-+.+....++..+..+++.+.|+.++ +.
T Consensus 211 SKa~gLAG-lRlGy~ia~-~~~i~~l~~vr~p~~--v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~ 285 (356)
T COG0079 211 SKAFGLAG-LRVGYAIAN-PELIAALNKVRPPFN--VSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LF 285 (356)
T ss_pred HHhhhcch-hceeeccCC-HHHHHHHHHhcCCCC--CCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CC
Confidence 99999766 556787766 478888888765443 33333333332 224567777888888999999999886 43
Q ss_pred EEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCC
Q 019543 229 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 308 (339)
Q Consensus 229 ~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g 308 (339)
.+ +|+ .+..+-+.+++.. +..+.+.|...|+.++.-.. .|
T Consensus 286 ~v-~pS----------------~aNFvlv~~~~~~-~~~l~~~L~~~giivR~~~~----------------------~~ 325 (356)
T COG0079 286 GV-FPS----------------QANFVLVRVPDAE-AAALAEALLKKGILVRDCSS----------------------VG 325 (356)
T ss_pred ee-cCC----------------CCcEEEEECCCcc-HHHHHHHHHHCCEEEEeCCC----------------------CC
Confidence 22 342 3556666665533 55778888778888773210 01
Q ss_pred CCCCeEEEEeccCCH-HHHHHHHHHHHh
Q 019543 309 LTEDLVRISVGIEDV-NDLISDLDKALR 335 (339)
Q Consensus 309 ~~~~~lRisvg~e~~-~~li~~l~~al~ 335 (339)
..++.+||++|.++. +.+++.|.+.++
T Consensus 326 ~~~~~lRitvgt~een~~ll~AL~~~~~ 353 (356)
T COG0079 326 LLPGYLRITVGTPEENDRLLAALREVLK 353 (356)
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHHHHh
Confidence 245789999997554 444555544443
No 239
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.55 E-value=7.7e-13 Score=127.62 Aligned_cols=167 Identities=14% Similarity=0.105 Sum_probs=101.4
Q ss_pred HHHHHHHHHhHhC--------CCeEE--EcCcHHHHHHHHH----HhcCCCCEEEEcCCCccchHHHHH-----------
Q 019543 57 RDALESLLAKLDK--------ADRAL--CFTSGMAALAAVT----HLLGTGEEIVAGDDLYGGTDRLLS----------- 111 (339)
Q Consensus 57 ~~~le~~la~~~g--------~~~~l--~~~sG~~A~~~il----~ll~~GD~Vi~~~~~y~~~~~~~~----------- 111 (339)
..+|++.+++++. .++++ .+++|+.|+..++ .+++|||+|++++|.|+.....++
T Consensus 74 ~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l 153 (404)
T PTZ00376 74 LQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRY 153 (404)
T ss_pred CHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccc
Confidence 3466666666542 23444 3666678876432 467999999999998876543222
Q ss_pred ---------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC------cc
Q 019543 112 ---------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR------PL 140 (339)
Q Consensus 112 ---------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~------~~ 140 (339)
++|+++|++||++||+|++|....+.. ..
T Consensus 154 ~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 233 (404)
T PTZ00376 154 YDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAI 233 (404)
T ss_pred cCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHH
Confidence 889999999999999999996443321 01
Q ss_pred ---c-CC-CeEEEeccccccccCCCceEEEEE--EcChhHHHHHH----HHHHhcCCCCChHHHHHHHhchhh-------
Q 019543 141 ---E-LG-ADIVMHSATKFIAGHSDVMAGVLA--VKGERLAKELY----FLQNAEGSGLAPFDCWICLRGVKT------- 202 (339)
Q Consensus 141 ---~-~~-~Di~~~S~sK~l~g~~~~~gG~v~--~~~~~l~~~l~----~~~~~~~~~~~~~~a~~~~~~l~~------- 202 (339)
. .. --|+++||||.++.+|.++| |++ ..++++.+.+. ..........+.+...++...|+.
T Consensus 234 ~~~~~~~~~vi~i~SfSK~~~~~GlRvG-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 312 (404)
T PTZ00376 234 RLFAERGVEFLVAQSFSKNMGLYGERIG-ALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEW 312 (404)
T ss_pred HHHHhcCCcEEEEEeCCCcccccccccc-eEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHH
Confidence 1 11 23888999999998776655 552 33445554443 222222233344444444333322
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhCC
Q 019543 203 ---MALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 203 ---~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
+....++.+++.+.+.+.|+++
T Consensus 313 ~~~~~~~~~~~~~~r~~l~~~L~~~ 337 (404)
T PTZ00376 313 LSELKEMSGRIQNMRQLLYDELKAL 337 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2223345567777788888775
No 240
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.54 E-value=6.5e-13 Score=138.17 Aligned_cols=265 Identities=16% Similarity=0.077 Sum_probs=151.4
Q ss_pred CCchHHHHHHHHHhHhCCC--e-EEEcCc-HHHHHHHHHH-h-cCCCCEEEEcCCCccchH-------------------
Q 019543 53 GNPTRDALESLLAKLDKAD--R-ALCFTS-GMAALAAVTH-L-LGTGEEIVAGDDLYGGTD------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~--~-~l~~~s-G~~A~~~il~-l-l~~GD~Vi~~~~~y~~~~------------------- 107 (339)
.....++.++++++++|++ + .++|++ +++|+..+.. + +++||+|+++...|....
T Consensus 76 ~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~ 155 (805)
T PLN02724 76 SSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIE 155 (805)
T ss_pred HHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccch
Confidence 3456789999999999973 3 455555 5888876544 4 689999999643221110
Q ss_pred ---------------------H-----------------HHH--------------HHHHHHHHHc--------CCEEEE
Q 019543 108 ---------------------R-----------------LLS--------------RKIAEMAHAH--------GALLLV 127 (339)
Q Consensus 108 ---------------------~-----------------~~~--------------~~I~~la~~~--------g~~liv 127 (339)
. ++. +.|..+++.+ ++++++
T Consensus 156 ~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~v 235 (805)
T PLN02724 156 EAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLL 235 (805)
T ss_pred hccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEe
Confidence 0 000 5443334322 368999
Q ss_pred eCCcCCCCCc-CcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH------------------------H
Q 019543 128 DNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ------------------------N 182 (339)
Q Consensus 128 D~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~------------------------~ 182 (339)
|.+|+.|... +...+++|++++|++|++|+|.+ .|+++.++ ++.+.+.... +
T Consensus 236 DaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G--~G~L~vr~-~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~r 312 (805)
T PLN02724 236 DAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTG--LGALLVRR-DAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQR 312 (805)
T ss_pred ehhhhcCCCCCChhhcCCCEEEEecceeccCCCC--ceEEEEeh-hhhhhhcCCccCCCceEEEecccceeeccccHHHH
Confidence 9999988753 44457899999999999997743 46777775 4544443210 0
Q ss_pred hcCCCCChHHHHHHHhchhhH-----HHHHHHHHHHHHHHHHHHhCCC------CceEEecCCC-CCCCchHhHhhhcCC
Q 019543 183 AEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHP------RVKKVNYAGL-PEHPGHELHYSQAKG 250 (339)
Q Consensus 183 ~~~~~~~~~~a~~~~~~l~~~-----~~r~~~~~~~a~~l~~~L~~~~------~i~~v~~p~~-~~~~~~~~~~~~~~~ 250 (339)
+...+.+......+..+++.+ +...++..+.++++.+.|++++ +|+ ++.|.- ..++ ..
T Consensus 313 fE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~-iyg~~~~~~~~---------~~ 382 (805)
T PLN02724 313 FEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCV-LYGNHTFKLEF---------HI 382 (805)
T ss_pred hcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEE-EcCCCCCCCCc---------cc
Confidence 111112221111222233332 2233444566778888888775 342 332310 0000 12
Q ss_pred CcceEEEeeCCHH---H-HHHHHccCCcceeecccCCcccceeccccccCCC---CCHHHHH---------------hCC
Q 019543 251 AGSVLSFLTGSLA---L-SKHVVETTKYFSITVSFGSVKSLISMPCFMSHAS---IPVEVRQ---------------ARG 308 (339)
Q Consensus 251 ~~~ivs~~~~~~~---~-~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~---~~~~~~~---------------~~g 308 (339)
.+++++|.+.+.. - ...+...+..++|.++.|. +|+...|.. +..+... -.|
T Consensus 383 r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~------~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~ 456 (805)
T PLN02724 383 QGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGC------FCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHG 456 (805)
T ss_pred ccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeecc------ccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecC
Confidence 6799999874321 0 1112222345789999775 444333321 1111000 012
Q ss_pred CCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 309 LTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 309 ~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
...+.||+|+|..++++.|+.|.++|++
T Consensus 457 ~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 457 RPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred cccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 2348999999999999999999999975
No 241
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.52 E-value=1.2e-12 Score=125.92 Aligned_cols=234 Identities=16% Similarity=0.220 Sum_probs=141.2
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhc-----------CCCCEEEEcCCCccchH---------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL-----------GTGEEIVAGDDLYGGTD--------------- 107 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll-----------~~GD~Vi~~~~~y~~~~--------------- 107 (339)
++..+.+|+.++++.+.+.+++++||+.|+...+.++ ..++.|++.+..|+|..
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~ 151 (400)
T PTZ00125 72 NDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNN 151 (400)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhcc
Confidence 5678899999999999899999999999997544322 13467776655444321
Q ss_pred --------------------HHHH--------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-
Q 019543 108 --------------------RLLS--------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRP- 139 (339)
Q Consensus 108 --------------------~~~~--------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~- 139 (339)
..+. ++|.++|++||+++|+||+|. .|..+..
T Consensus 152 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~ 231 (400)
T PTZ00125 152 FGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL 231 (400)
T ss_pred CCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh
Confidence 0000 889999999999999999984 3322221
Q ss_pred ----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHH--HHHHHHHHH
Q 019543 140 ----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDN 213 (339)
Q Consensus 140 ----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~ 213 (339)
.....|+++ ++|++++... ..|++++++ ++.+.+.......+...+|..++++...|+.+. ...++..+.
T Consensus 232 ~~~~~~~~pd~~~--~sK~l~~g~~-~ig~v~~~~-~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~ 307 (400)
T PTZ00125 232 AHDHEGVKPDIVL--LGKALSGGLY-PISAVLAND-DVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRL 307 (400)
T ss_pred HHHhcCCCCCEEE--EcccccCCCc-CcEEEEEcH-HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 112347665 6799986432 346777765 666665432222233456766666655555442 223344455
Q ss_pred HHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--HHHHHHHHccCCcceeecccCCcccc
Q 019543 214 AQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSL 287 (339)
Q Consensus 214 a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--~~~~~~~~~~L~~~~i~v~~G~~~s~ 287 (339)
.+++.+.|++. +.+..+ ++.|.++++.+.. .....+|.+.|...|+.+.
T Consensus 308 ~~~l~~~l~~l~~~~~~~~~~------------------~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~------- 362 (400)
T PTZ00125 308 GEVFRDGLKELLKKSPWVKEI------------------RGKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAK------- 362 (400)
T ss_pred HHHHHHHHHHHHhcCCCeEEE------------------ecccEEEEEEEccCcchHHHHHHHHHHHCCeEEe-------
Confidence 66666666543 211111 2356788887743 3345677877766666543
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEeccCC----HHHHHHHHHHHHhc
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED----VNDLISDLDKALRT 336 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~----~~~li~~l~~al~~ 336 (339)
|. .++.|||+..+.. .++.++.|.++|++
T Consensus 363 ---~~-----------------~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 363 ---PT-----------------HDNIIRFAPPLVITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred ---ec-----------------CCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 21 2367999976544 44445555555443
No 242
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.51 E-value=4.6e-13 Score=124.09 Aligned_cols=176 Identities=18% Similarity=0.165 Sum_probs=123.5
Q ss_pred CcccCC--CCchHHHHHHHHHhHhCC----C-eEEEcCcHHHHHH-HHHHhcCCCCEEEEcCCCccchHHHHH-------
Q 019543 47 YDYTRS--GNPTRDALESLLAKLDKA----D-RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLS------- 111 (339)
Q Consensus 47 ~~y~r~--~~~~~~~le~~la~~~g~----~-~~l~~~sG~~A~~-~il~ll~~GD~Vi~~~~~y~~~~~~~~------- 111 (339)
..|+|+ ..++++.|.+.+++++|. + +++++.++++|+. +++.++.+||+|++.+|.|+.....+.
T Consensus 63 ~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv 142 (420)
T KOG0257|consen 63 NQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPV 142 (420)
T ss_pred ccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcce
Confidence 345554 446788999999998874 2 4677777799998 677899999999999997765543222
Q ss_pred ----------------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-
Q 019543 112 ----------------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR- 138 (339)
Q Consensus 112 ----------------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~- 138 (339)
++|+++|++||+++|.|++|...++..
T Consensus 143 ~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~ 222 (420)
T KOG0257|consen 143 FVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGN 222 (420)
T ss_pred eeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCC
Confidence 899999999999999999986433211
Q ss_pred --------cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC-CCCChHHHHHHH---hc-------
Q 019543 139 --------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPFDCWICL---RG------- 199 (339)
Q Consensus 139 --------~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~-~~~~~~~a~~~~---~~------- 199 (339)
|-.+...+-++|++|+++..|+.+| |+++ ++.+...++....... ++.+|...+.+. ..
T Consensus 223 ~h~r~aslPgm~ertitvgS~gKtf~~TGWrlG-W~ig-p~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~ 300 (420)
T KOG0257|consen 223 KHIRIASLPGMYERTITVGSFGKTFGVTGWRLG-WAIG-PKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPG 300 (420)
T ss_pred cceeeecCCchhheEEEeccccceeeeeeeeee-eeec-hHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCc
Confidence 1112346899999999999888765 5656 4577777766654332 333444322211 11
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHhCC
Q 019543 200 -VKTMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 200 -l~~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
+..+..+.+...++.+.+++.|.++
T Consensus 301 ~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 301 GSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1234457778889999999999987
No 243
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.49 E-value=1.3e-12 Score=128.63 Aligned_cols=242 Identities=18% Similarity=0.172 Sum_probs=144.0
Q ss_pred chHHHHHHHHHhHhCCCeEEEc-CcHHHHHH-H-H-H--HhcCCCC----EEEEcCCCccchHHHHH-------------
Q 019543 55 PTRDALESLLAKLDKADRALCF-TSGMAALA-A-V-T--HLLGTGE----EIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~-~sG~~A~~-~-i-l--~ll~~GD----~Vi~~~~~y~~~~~~~~------------- 111 (339)
....++++.+++++|.+.+.++ ++|..+.. . . + .++++|| +|+++++.|+.....+.
T Consensus 113 el~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~ 192 (481)
T PRK04366 113 ELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNE 192 (481)
T ss_pred HHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCC
Confidence 5678889999999998765555 45544433 2 1 2 2467787 99999887765543222
Q ss_pred -----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC--cCcccCCCeEEEeccccc
Q 019543 112 -----------------------------------RKIAEMAHAHGALLLVDNSIMSPVL--SRPLELGADIVMHSATKF 154 (339)
Q Consensus 112 -----------------------------------~~I~~la~~~g~~livD~a~a~g~~--~~~~~~~~Di~~~S~sK~ 154 (339)
++|+++|+++|+++++|+++..+.. .++..+|+|++++|.+|+
T Consensus 193 ~~~~D~e~L~~~i~~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~ 272 (481)
T PRK04366 193 DGLVDLEALKAAVGEDTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKT 272 (481)
T ss_pred CCCcCHHHHHhhcccCCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEEEechhh
Confidence 8899999999999999999964422 255567999999999999
Q ss_pred cccC---CCceEEEEEEcChhHHHHHHHH-------H------------HhcCCCCChH---HHHH--HHhchhhHHHHH
Q 019543 155 IAGH---SDVMAGVLAVKGERLAKELYFL-------Q------------NAEGSGLAPF---DCWI--CLRGVKTMALRV 207 (339)
Q Consensus 155 l~g~---~~~~gG~v~~~~~~l~~~l~~~-------~------------~~~~~~~~~~---~a~~--~~~~l~~~~~r~ 207 (339)
|++| |+.-+|++++++ .+.+++... . +.-.+.-+.. .++. ...+.+.+.+..
T Consensus 273 l~~P~g~Ggp~~G~l~~~~-~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a 351 (481)
T PRK04366 273 FSTPHGGGGPGSGPVGVKE-ELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVS 351 (481)
T ss_pred cCCCCCCCCCCeeeeeehh-hhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9866 223467888775 455444200 0 0000000001 1111 112223344445
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEE---eeCCHHHHHHHHccCCcceeecccCCc
Q 019543 208 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF---LTGSLALSKHVVETTKYFSITVSFGSV 284 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~---~~~~~~~~~~~~~~L~~~~i~v~~G~~ 284 (339)
++..++++++++.|+++..+ .++. +. -...++.+ ...+ ..+.++.++|...|+.+. .
T Consensus 352 ~~~~~~a~~l~~~L~~~~~~---~~~~----~~---------~~~~~~~~~~~~~~g-~~~~~v~~~L~~~Gi~~~--~- 411 (481)
T PRK04366 352 EDAVLNANYLKARLKDIYDL---PYDR----PC---------MHEFVLSGKKLKETG-VRTLDIAKRLLDYGFHPP--T- 411 (481)
T ss_pred HHHHHHHHHHHHHhHhhCcc---cCCC----Ce---------eEEEEEECccccccC-CCHHHHHHHHHHCCccCC--c-
Confidence 66677889999999876222 1211 10 01122322 1111 134567777877676533 1
Q ss_pred ccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 285 KSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 285 ~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
...|. ..++.+|+|++..++++.|+.|.++|++
T Consensus 412 ---~~~p~----------------~~~~~l~is~~e~~t~edid~l~~~l~~ 444 (481)
T PRK04366 412 ---IYFPL----------------IVPEALMIEPTETESKETLDAFIAAMKQ 444 (481)
T ss_pred ---ccccc----------------ccCCeEEEcccCCCCHHHHHHHHHHHHH
Confidence 11221 1246899999998777777777777754
No 244
>PLN02397 aspartate transaminase
Probab=99.49 E-value=5.1e-12 Score=122.62 Aligned_cols=113 Identities=12% Similarity=0.094 Sum_probs=67.3
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcC------c---cc-CC-CeEEEeccccccccCCCceEEEE-EEcChhHHHHHH-
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSR------P---LE-LG-ADIVMHSATKFIAGHSDVMAGVL-AVKGERLAKELY- 178 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~------~---~~-~~-~Di~~~S~sK~l~g~~~~~gG~v-~~~~~~l~~~l~- 178 (339)
++|+++|++||++||+|++|..-.+.. . .. .+ --|+++||||.++.+|.++|.++ +..++++.+.+.
T Consensus 217 ~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~ 296 (423)
T PLN02397 217 EQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKS 296 (423)
T ss_pred HHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHH
Confidence 889999999999999999996544321 1 11 11 13788999999998787665443 243444444333
Q ss_pred ---HHHHhcCCCCChHHHHHHHhchhh----------HHHHHHHHHHHHHHHHHHHhCC
Q 019543 179 ---FLQNAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 179 ---~~~~~~~~~~~~~~a~~~~~~l~~----------~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
...+....+.+...+.++...|+. +...+++..++.+.+.+.|+++
T Consensus 297 ~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 297 QLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred HHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222222223344333333322222 2334556667778888888876
No 245
>PLN02624 ornithine-delta-aminotransferase
Probab=99.49 E-value=3.6e-12 Score=125.21 Aligned_cols=236 Identities=16% Similarity=0.207 Sum_probs=141.9
Q ss_pred CCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcC---------C-CC-EEEEcCCCccchH------------
Q 019543 51 RSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLG---------T-GE-EIVAGDDLYGGTD------------ 107 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~---------~-GD-~Vi~~~~~y~~~~------------ 107 (339)
+..++...+|+++|+++++.+.+++++||+.|+...+.+.+ + |. .|+.....|+|..
T Consensus 113 ~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~ 192 (474)
T PLN02624 113 AFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (474)
T ss_pred ccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccc
Confidence 34567788999999999988899999999999975432111 1 33 3555444444430
Q ss_pred -----------------------HHHH----------------------------HHHHHHHHHcCCEEEEeCCcC-CCC
Q 019543 108 -----------------------RLLS----------------------------RKIAEMAHAHGALLLVDNSIM-SPV 135 (339)
Q Consensus 108 -----------------------~~~~----------------------------~~I~~la~~~g~~livD~a~a-~g~ 135 (339)
..++ ++|.++|++||+++|+||+|. .|.
T Consensus 193 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~Gr 272 (474)
T PLN02624 193 TRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLAR 272 (474)
T ss_pred cccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCc
Confidence 1111 899999999999999999995 222
Q ss_pred CcCcc-----cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHHH--HHH
Q 019543 136 LSRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVE 208 (339)
Q Consensus 136 ~~~~~-----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~~--r~~ 208 (339)
.+... ....|+++ ++|.+++.+.. .|+++.++ ++.+.+.......+.+.+|...+.+...|+.+.. ..+
T Consensus 273 tG~~~a~~~~~i~pDiv~--lsK~lggG~~p-igav~~~~-~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~ 348 (474)
T PLN02624 273 TGKMLACDWEEVRPDVVI--LGKALGGGVIP-VSAVLADK-DVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLAE 348 (474)
T ss_pred CcchhhHHhcCCCCCEEE--ecccccCCCCc-ceeeeecH-HHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHHH
Confidence 22211 22346666 68999965433 45666653 5555443222112235677777766666665532 233
Q ss_pred HHHHHHHHHHHHHhCC----CC-ceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC----HHHHHHHHccCCcceeec
Q 019543 209 KQQDNAQKIAEFLASH----PR-VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS----LALSKHVVETTKYFSITV 279 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~----~~-i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~----~~~~~~~~~~L~~~~i~v 279 (339)
+..+..+++.+.|+.+ +. +.. .++.|.++.|.++. ...+.++++.|.+.|+.+
T Consensus 349 ~~~~~~~~l~~~L~~l~~~~~~~i~~------------------vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v 410 (474)
T PLN02624 349 RSAKLGQELRDQLQKIQKQFPKLIKE------------------VRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLA 410 (474)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEE------------------EEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEE
Confidence 3344555666655542 21 111 12467788887753 244667888887777654
Q ss_pred ccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 280 SFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 280 ~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..+ ..+.|||++.+..+++.|+.+.+.|+
T Consensus 411 ~p~---------------------------~~~~lR~~p~l~~t~e~id~~l~~L~ 439 (474)
T PLN02624 411 KPT---------------------------HDTIIRLAPPLSISEDELQECSKALS 439 (474)
T ss_pred ecC---------------------------CCCEEEEECCccCCHHHHHHHHHHHH
Confidence 321 23679999776666655555555443
No 246
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.48 E-value=7.2e-12 Score=120.52 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=100.3
Q ss_pred HHHHHHHHHhHh----C----CCeE--EEcCcHHHHHHHHHH---hcCCCCEEEEcCCCccchHHHHH------------
Q 019543 57 RDALESLLAKLD----K----ADRA--LCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDRLLS------------ 111 (339)
Q Consensus 57 ~~~le~~la~~~----g----~~~~--l~~~sG~~A~~~il~---ll~~GD~Vi~~~~~y~~~~~~~~------------ 111 (339)
..+|++.+++++ + .++. ++++++++|+..++. .++|||+|++++|.|++....++
T Consensus 71 ~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~ 150 (396)
T PRK09257 71 LAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYY 150 (396)
T ss_pred CHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEecc
Confidence 345566666553 2 2333 566666899976542 35899999999999876653332
Q ss_pred --------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc--C---cc--
Q 019543 112 --------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS--R---PL-- 140 (339)
Q Consensus 112 --------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~--~---~~-- 140 (339)
++|+++|++||++||+|++|...... . ++
T Consensus 151 ~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~ 230 (396)
T PRK09257 151 DAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRA 230 (396)
T ss_pred ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHH
Confidence 89999999999999999999643321 1 11
Q ss_pred -c-C-CCeEEEeccccccccCCCceEEEEEE--cChhHH----HHHHHHHHhcCCCCChHHHHHHHhchh----------
Q 019543 141 -E-L-GADIVMHSATKFIAGHSDVMAGVLAV--KGERLA----KELYFLQNAEGSGLAPFDCWICLRGVK---------- 201 (339)
Q Consensus 141 -~-~-~~Di~~~S~sK~l~g~~~~~gG~v~~--~~~~l~----~~l~~~~~~~~~~~~~~~a~~~~~~l~---------- 201 (339)
. . .--|+++||||.++.+|.+. ||+++ .+.+.. ..++...+......++....++...|+
T Consensus 231 ~~~~~~~vi~i~SfSK~~~~~GlRi-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 309 (396)
T PRK09257 231 FAAAGLELLVASSFSKNFGLYGERV-GALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEA 309 (396)
T ss_pred HHhcCCcEEEEEEcCCcCccccccc-eeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHH
Confidence 1 1 12488999999999777554 56552 333322 223222222223334444333322221
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCC
Q 019543 202 TMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 202 ~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
.+...+++.+++.+.+.+.|+++
T Consensus 310 ~~~~~r~~~~~rr~~l~~~L~~~ 332 (396)
T PRK09257 310 ELEEMRERIKAMRQLLVEALKAK 332 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 23334555667777888888775
No 247
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.48 E-value=1.8e-11 Score=114.92 Aligned_cols=168 Identities=19% Similarity=0.199 Sum_probs=117.7
Q ss_pred chHHHHHHHHHhHhCCC--eE-EEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchH--HHHH-----------------
Q 019543 55 PTRDALESLLAKLDKAD--RA-LCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTD--RLLS----------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~-l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~--~~~~----------------- 111 (339)
...+++.+.|..+++.+ ++ ++.+||+.|+.+ +.++++|||+|++..+-.+|-+ .+.+
T Consensus 38 ~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v 117 (383)
T COG0075 38 GIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGEAV 117 (383)
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCCCC
Confidence 35677888888889876 44 456788999975 6679999999999887544432 1111
Q ss_pred ---------------------------------HHHHHHHHHcCCEEEEeCCcCCCC-CcCcccCCCeEEEecccccccc
Q 019543 112 ---------------------------------RKIAEMAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSATKFIAG 157 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~g~~livD~a~a~g~-~~~~~~~~~Di~~~S~sK~l~g 157 (339)
++|+++|++||+++|||.+.+.|. ..+.-++|+|+++++..|++++
T Consensus 118 ~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~ 197 (383)
T COG0075 118 DPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGA 197 (383)
T ss_pred CHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhccC
Confidence 999999999999999999988764 3456678999999999999998
Q ss_pred CCCceEEEEEEcChhHHHHHH------------HHHHhc---C--CCCChHHHH-HHHhchhh-----HHHHHHHHHHHH
Q 019543 158 HSDVMAGVLAVKGERLAKELY------------FLQNAE---G--SGLAPFDCW-ICLRGVKT-----MALRVEKQQDNA 214 (339)
Q Consensus 158 ~~~~~gG~v~~~~~~l~~~l~------------~~~~~~---~--~~~~~~~a~-~~~~~l~~-----~~~r~~~~~~~a 214 (339)
|.+ .|++..+++ ..+.+. .+..+. + ...+|.... .+..+|+. ++.|.+++++++
T Consensus 198 PPG--la~v~~S~~-a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~ 274 (383)
T COG0075 198 PPG--LAFVAVSER-ALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLA 274 (383)
T ss_pred CCc--cceeEECHH-HHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 865 467777753 333332 111111 1 122333322 22223322 588899999999
Q ss_pred HHHHHHHhCCC
Q 019543 215 QKIAEFLASHP 225 (339)
Q Consensus 215 ~~l~~~L~~~~ 225 (339)
+.+++.++.+.
T Consensus 275 ~a~r~~~~alG 285 (383)
T COG0075 275 EALRAGLEALG 285 (383)
T ss_pred HHHHHHHHHcC
Confidence 99999999764
No 248
>PRK08637 hypothetical protein; Provisional
Probab=99.47 E-value=1.1e-11 Score=118.91 Aligned_cols=220 Identities=14% Similarity=0.156 Sum_probs=125.7
Q ss_pred eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------------------------------
Q 019543 72 RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------- 111 (339)
Q Consensus 72 ~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------- 111 (339)
+.++++++++|+..++ .+++|||+|++++|.|+.....+.
T Consensus 71 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~ 150 (388)
T PRK08637 71 LPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIV 150 (388)
T ss_pred eeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEE
Confidence 3466666688887655 478999999999998765543211
Q ss_pred ------------------HHHHHHHHH-----cCCEEEEeCCcCCCCCcC----c-cc----CCCe---EEEeccccccc
Q 019543 112 ------------------RKIAEMAHA-----HGALLLVDNSIMSPVLSR----P-LE----LGAD---IVMHSATKFIA 156 (339)
Q Consensus 112 ------------------~~I~~la~~-----~g~~livD~a~a~g~~~~----~-~~----~~~D---i~~~S~sK~l~ 156 (339)
++|+++|++ |+++||+||+|..-.+.. + .. ..-. ++++|+||.++
T Consensus 151 ~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~ 230 (388)
T PRK08637 151 ILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEF 230 (388)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCC
Confidence 788888875 999999999986433211 1 11 1112 33459999988
Q ss_pred cCCCceEEEEEEc-----ChhHHHHHHHHH----HhcCCCCChHHHHHHHhchhh--H----HHHHHHHHHHHHHHHHHH
Q 019543 157 GHSDVMAGVLAVK-----GERLAKELYFLQ----NAEGSGLAPFDCWICLRGVKT--M----ALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 157 g~~~~~gG~v~~~-----~~~l~~~l~~~~----~~~~~~~~~~~a~~~~~~l~~--~----~~r~~~~~~~a~~l~~~L 221 (339)
.+|.+ .||++.+ ++.+.+.+.... +......+.+...++...|+. + ...+....++.+.+.+.|
T Consensus 231 ~pGlR-lG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l 309 (388)
T PRK08637 231 VWGFR-VGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVL 309 (388)
T ss_pred Ccccc-eEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87754 5666653 346666664321 111223444444433333322 2 122223444455566666
Q ss_pred hCCC---CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcccceeccccccCC
Q 019543 222 ASHP---RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHA 297 (339)
Q Consensus 222 ~~~~---~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~ 297 (339)
+..+ ++. .+| ...|..+++.+++ ....+|++.| ++.|+.+.. .
T Consensus 310 ~~~~~~~~~~--~~~---------------~~~g~~~~~~l~~-~~~~~l~~~l~~~~gv~~~~---------~------ 356 (388)
T PRK08637 310 YDGKYDDAWQ--AYP---------------FNSGYFMCLKLKG-VDAEELRVHLLEKYGIGTIA---------L------ 356 (388)
T ss_pred HhhCCCCCcc--ccc---------------ccceEEEEecCCh-HHHHHHHHHHhhhcceEEEe---------c------
Confidence 5542 111 111 1134466667753 2456788877 456775431 0
Q ss_pred CCCHHHHHhCCCCCCeEEEEeccC---CHHHHHHHHHHHHhcC
Q 019543 298 SIPVEVRQARGLTEDLVRISVGIE---DVNDLISDLDKALRTG 337 (339)
Q Consensus 298 ~~~~~~~~~~g~~~~~lRisvg~e---~~~~li~~l~~al~~~ 337 (339)
..+.+||+++.. +.++-++.|.++++++
T Consensus 357 ------------~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 357 ------------NETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred ------------cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 235699999864 4455577777777654
No 249
>PLN02672 methionine S-methyltransferase
Probab=99.47 E-value=1.1e-11 Score=129.86 Aligned_cols=169 Identities=13% Similarity=0.095 Sum_probs=110.6
Q ss_pred chHHHHHHHHHhHhCCC----eEEEcCcH-HHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 55 PTRDALESLLAKLDKAD----RALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~----~~l~~~sG-~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
...+++.+++++.+|.+ +.+++++| ++++.. +.++++|||+|+++.|.|+.....++
T Consensus 734 dlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf 813 (1082)
T PLN02672 734 DPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGF 813 (1082)
T ss_pred HHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCC
Confidence 45788999999887753 24555555 566654 45588999999999998876543322
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-Cc-----c-----cC
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RP-----L-----EL 142 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~-----~-----~~ 142 (339)
++|+++|++||++||+||+|+.-.+. .. + ..
T Consensus 814 ~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~ 893 (1082)
T PLN02672 814 KLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRL 893 (1082)
T ss_pred CCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHh
Confidence 88999999999999999999732221 11 0 00
Q ss_pred ------CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCC-CChHHHHHHHhc--------hhhHHHHH
Q 019543 143 ------GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG-LAPFDCWICLRG--------VKTMALRV 207 (339)
Q Consensus 143 ------~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~-~~~~~a~~~~~~--------l~~~~~r~ 207 (339)
..-++++||||.++.+|. +.||++++++.+++.++......+.. .+...+..++.. .+.+.+.+
T Consensus 894 ~~~sks~nVIvL~SfSKkf~lpGL-RIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r 972 (1082)
T PLN02672 894 KSSNPSFAVALLGGLSTELLSGGH-EFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQK 972 (1082)
T ss_pred ccccCCceEEEEeCcHHhhccHHH-HheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence 023688899999998775 45688887656778777654322221 122222222211 12234455
Q ss_pred HHHHHHHHHHHHHHhCC
Q 019543 208 EKQQDNAQKIAEFLASH 224 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~~ 224 (339)
+...++.+++.+.|+.+
T Consensus 973 ~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 973 KILKSRAERLKETLEAC 989 (1082)
T ss_pred HHHHHHHHHHHHHHHHC
Confidence 56778888899999876
No 250
>PLN02368 alanine transaminase
Probab=99.47 E-value=1.2e-11 Score=119.21 Aligned_cols=172 Identities=12% Similarity=0.121 Sum_probs=108.7
Q ss_pred chHHHHHHHHHhHhC----CCeEEEcCcHHHHHHHHH-Hhc-CCCCEEEEcCCCccchHHHHH-----------------
Q 019543 55 PTRDALESLLAKLDK----ADRALCFTSGMAALAAVT-HLL-GTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g----~~~~l~~~sG~~A~~~il-~ll-~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
++++++-+.+.+..| .+++++++++++|+..++ .++ +|||+|++++|.|......+.
T Consensus 111 ~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~ 190 (407)
T PLN02368 111 GVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENW 190 (407)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCC
Confidence 344444444444335 245667777788987654 466 699999999998865432111
Q ss_pred ------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--cc-------
Q 019543 112 ------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR--PL------- 140 (339)
Q Consensus 112 ------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~--~~------- 140 (339)
++|+++|++||++||+||+|+...+.. +.
T Consensus 191 ~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~ 270 (407)
T PLN02368 191 GLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVL 270 (407)
T ss_pred CCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHH
Confidence 889999999999999999997543311 11
Q ss_pred -c-------CCCeEEEecccccc-ccCCCceEEEEEE--cChhHHHHHHHHHHhcCCCCChHHHHHHHhchh--------
Q 019543 141 -E-------LGADIVMHSATKFI-AGHSDVMAGVLAV--KGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-------- 201 (339)
Q Consensus 141 -~-------~~~Di~~~S~sK~l-~g~~~~~gG~v~~--~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~-------- 201 (339)
. ..--|+++||||.+ +.+|.+ .||+++ .++++++.+..... ...+.+.+..+++...++
T Consensus 271 ~~~~~~~~~~~~vI~~~SfSK~~~~~~GlR-iGy~i~~~~~~~li~~~~~~~~-~~~~~~~~~Q~aa~~~l~~~~~~~~~ 348 (407)
T PLN02368 271 MDMGPPISKEVQLVSFHTVSKGYWGECGQR-GGYFEMTNIPPKTVEEIYKVAS-IALSPNVSGQIFMGLMVNPPKPGDIS 348 (407)
T ss_pred hhhcccccccceEEEEecCCcccccCCccc-eEEEEEeCCCHHHHHHHHHHhc-ccCCCCcHHHHHHHHHhCCCCCCCcc
Confidence 0 11238889999998 566655 567764 24567777776542 233344433333333222
Q ss_pred ------hHHHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 202 ------TMALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 202 ------~~~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
......+..+++.+.+.+.|++++++.
T Consensus 349 ~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~ 381 (407)
T PLN02368 349 YDQFVRESKGILESLRRRARMMTDGFNSCKNVV 381 (407)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 112345666778888999999888764
No 251
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.43 E-value=3.1e-13 Score=124.00 Aligned_cols=174 Identities=25% Similarity=0.274 Sum_probs=123.5
Q ss_pred cccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCc------cchH-------------
Q 019543 48 DYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLY------GGTD------------- 107 (339)
Q Consensus 48 ~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y------~~~~------------- 107 (339)
.|+ .++.+++||+++++++|.+.+++++||++||.+. ..+++|++.|++.+..+ ++..
T Consensus 24 ~Yg--~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~ 101 (290)
T PF01212_consen 24 AYG--EDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETGAIEELSGAKLIPLPSD 101 (290)
T ss_dssp CTT--SSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBEC
T ss_pred ccC--CChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccchhhHhcCcEEEECCCc
Confidence 466 7899999999999999999999999999999864 45779999999976521 1110
Q ss_pred -----------HHHH-------------------------------HHHHHHHHHcCCEEEEeCCc---CC---CCCcCc
Q 019543 108 -----------RLLS-------------------------------RKIAEMAHAHGALLLVDNSI---MS---PVLSRP 139 (339)
Q Consensus 108 -----------~~~~-------------------------------~~I~~la~~~g~~livD~a~---a~---g~~~~~ 139 (339)
..+. ++|.++||+||++|+.|.|- +. +.....
T Consensus 102 ~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e 181 (290)
T PF01212_consen 102 DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAE 181 (290)
T ss_dssp TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHH
T ss_pred ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHH
Confidence 0110 89999999999999999984 11 111122
Q ss_pred ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCCh--HHHH------HHHhchhhHHHHHHHHH
Q 019543 140 LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP--FDCW------ICLRGVKTMALRVEKQQ 211 (339)
Q Consensus 140 ~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~--~~a~------~~~~~l~~~~~r~~~~~ 211 (339)
+..++|++..|++|.++.+ .|++|++++ +++++.+.+++..|..+.. +.++ .++..++....+..+.+
T Consensus 182 ~~~~~D~v~~~~tK~~g~~---~Gavl~~~~-~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~ 257 (290)
T PF01212_consen 182 IAAGADSVSFGGTKNGGAP---GGAVLAGNK-EFIAKARRQRKRLGGGMRQAGVLAAAELYQFAALRALELWLERARHAN 257 (290)
T ss_dssp HHTTSSEEEEETTSTT-SS---SEEEEEESH-HHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHHHHCHEECSHHHHHCHH
T ss_pred HhhhCCEEEEEEEcccccc---cceEEEech-HHHHHHHHHHHHhccCeeecceeeeechhhHHHHHHHHhhHHHHHHHH
Confidence 3357899999999999854 367777765 6666666555555533321 2222 44555666667778888
Q ss_pred HHHHHHHHHHhCCCCc
Q 019543 212 DNAQKIAEFLASHPRV 227 (339)
Q Consensus 212 ~~a~~l~~~L~~~~~i 227 (339)
++++++++.|+..+.+
T Consensus 258 ~~A~~La~~l~~~~~~ 273 (290)
T PF01212_consen 258 AMAKRLAAGLEALGGV 273 (290)
T ss_dssp HHHHCHHHCHHEECEE
T ss_pred HHHHHHHHHHHHCCCc
Confidence 9999999999987653
No 252
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.43 E-value=2.1e-11 Score=118.36 Aligned_cols=242 Identities=15% Similarity=0.172 Sum_probs=148.8
Q ss_pred CCchHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHHHh---c---CCCCEEEEcCCCccchH-----------------
Q 019543 53 GNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---L---GTGEEIVAGDDLYGGTD----------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il~l---l---~~GD~Vi~~~~~y~~~~----------------- 107 (339)
.++...+|.++|+++... +.+.+++||++|+.+.+.+ . .....|++....|+|..
T Consensus 115 ~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 194 (442)
T TIGR03372 115 LDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFM 194 (442)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCC
Confidence 356667788888877643 4678889999999754332 2 12356776555444321
Q ss_pred ------------------HHHH-------------------------------HHHHHHHHHcCCEEEEeCCc-CCCCCc
Q 019543 108 ------------------RLLS-------------------------------RKIAEMAHAHGALLLVDNSI-MSPVLS 137 (339)
Q Consensus 108 ------------------~~~~-------------------------------~~I~~la~~~g~~livD~a~-a~g~~~ 137 (339)
..++ ++|.++|++||+++|+||++ +.|-.+
T Consensus 195 p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG 274 (442)
T TIGR03372 195 PLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTG 274 (442)
T ss_pred CCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccc
Confidence 0110 89999999999999999998 333222
Q ss_pred Cc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCC--ChHHHHHHHhchhhHHHH--HH
Q 019543 138 RP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKTMALR--VE 208 (339)
Q Consensus 138 ~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~--~~~~a~~~~~~l~~~~~r--~~ 208 (339)
.. .....||++ ++|.+++.--.+| .+++++ ++.+.+......++.+. +|..++.++..|+.+++. .+
T Consensus 275 ~~~a~e~~gv~PDivt--~gK~lg~G~~Pig-avv~~~-~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~ 350 (442)
T TIGR03372 275 KMFACEHEGVQPDILC--LAKALGGGVMPIG-ATIATE-AVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPA 350 (442)
T ss_pred cchhhhhcCCCCCeee--ehhhhcCCcccce-EEEecH-HHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 21 122458775 8999985211244 455553 56665532111233333 788888887777766422 34
Q ss_pred HHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccce
Q 019543 209 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLI 288 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~ 288 (339)
+.++..+++.+.|+++.. .+|..-. ..+|.|.++.+++.+......+.+.+...|+.++..
T Consensus 351 ~~~~~G~~l~~~L~~l~~----~~~~~i~---------~vRG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~------ 411 (442)
T TIGR03372 351 QAAIKGDFLLDGFQQLAA----EYPDLII---------EARGKGLLMAIEFRDNEIGYAFAKELFQQNILVAGT------ 411 (442)
T ss_pred HHHHHHHHHHHHHHHHHH----hCCCceE---------EEecceEEEEEEeCChHHHHHHHHHHHHCCcEEeec------
Confidence 444555666666654310 1221000 024678999999876555677888887777665411
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.+ ..+.|||++.+..+++.++.+.++|++
T Consensus 412 -~~------------------~~~~lr~~Ppl~~t~~~id~~~~~l~~ 440 (442)
T TIGR03372 412 -LN------------------NAKSIRIEPPLTITIEQCALVIKAAKD 440 (442)
T ss_pred -CC------------------CCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 01 236799999999988888888888875
No 253
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.43 E-value=2.3e-12 Score=107.99 Aligned_cols=110 Identities=34% Similarity=0.406 Sum_probs=89.2
Q ss_pred HHHHHHHHHhHh--CCCeEEEcCcHHHHHHHHHH-hcCCCCEEEEcCCCccchH-HHHH---------------------
Q 019543 57 RDALESLLAKLD--KADRALCFTSGMAALAAVTH-LLGTGEEIVAGDDLYGGTD-RLLS--------------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~--g~~~~l~~~sG~~A~~~il~-ll~~GD~Vi~~~~~y~~~~-~~~~--------------------- 111 (339)
.+++++.+++++ +.+.++++++|+.|+.+++. +.++|++|+++++.|++.. ....
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 81 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV 81 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhh
Confidence 468999999999 88899999999999986554 6778999999988776654 2211
Q ss_pred ------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cccCCCeEEEecccccccc
Q 019543 112 ------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PLELGADIVMHSATKFIAG 157 (339)
Q Consensus 112 ------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~~~~~Di~~~S~sK~l~g 157 (339)
++|.++|+++|+++++|++++.+.... ....++|+++.|++|++++
T Consensus 82 ~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~K~~~~ 161 (170)
T cd01494 82 AILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKNLGG 161 (170)
T ss_pred hhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEEcccccCC
Confidence 799999999999999999998765542 4446789999999999996
Q ss_pred CCCceEEEEEEc
Q 019543 158 HSDVMAGVLAVK 169 (339)
Q Consensus 158 ~~~~~gG~v~~~ 169 (339)
+ .+|+++++
T Consensus 162 ~---~~G~l~~~ 170 (170)
T cd01494 162 E---GGGVVIVK 170 (170)
T ss_pred C---ceEEEEeC
Confidence 3 46888753
No 254
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.42 E-value=1.1e-11 Score=121.02 Aligned_cols=237 Identities=20% Similarity=0.215 Sum_probs=142.4
Q ss_pred HHHHHHHHHhHhCCC--eEEEcCcHHHHHHHH-HHh-cCCCCEEEEcCCCccchHHHHH---------------------
Q 019543 57 RDALESLLAKLDKAD--RALCFTSGMAALAAV-THL-LGTGEEIVAGDDLYGGTDRLLS--------------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~g~~--~~l~~~sG~~A~~~i-l~l-l~~GD~Vi~~~~~y~~~~~~~~--------------------- 111 (339)
..++++.+++++|.+ .++++++|++++.++ +++ +++||+|+++++.|+.....+.
T Consensus 114 ~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d 193 (447)
T PRK00451 114 IFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTD 193 (447)
T ss_pred HHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCC
Confidence 445557789999975 456777778887754 444 4799999999887754332111
Q ss_pred -----------------------------HHHHHHHHHcCCEEEE--eCCcCCCCCcCcccCCCeEEEecccc---c--c
Q 019543 112 -----------------------------RKIAEMAHAHGALLLV--DNSIMSPVLSRPLELGADIVMHSATK---F--I 155 (339)
Q Consensus 112 -----------------------------~~I~~la~~~g~~liv--D~a~a~g~~~~~~~~~~Di~~~S~sK---~--l 155 (339)
++|.++|+++|+++++ |.. +.|....+..+++|++++|..| . +
T Consensus 194 ~~~l~~~i~~~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~~~~~~~D~~~~s~~k~~~~~~~ 272 (447)
T PRK00451 194 LEALEAAVDDDTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKPPGEYGADIVVGEGQPLGIPLSF 272 (447)
T ss_pred HHHHHHhcCCCeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCCcccCCCCEEEECCCcCCCCCCC
Confidence 9999999999999998 533 4554444456789999996544 3 4
Q ss_pred ccCCCceEEEEEEcChhHHHHHHH-------------------------HHHhc---CCCCC-h---HHHHHHHhch--h
Q 019543 156 AGHSDVMAGVLAVKGERLAKELYF-------------------------LQNAE---GSGLA-P---FDCWICLRGV--K 201 (339)
Q Consensus 156 ~g~~~~~gG~v~~~~~~l~~~l~~-------------------------~~~~~---~~~~~-~---~~a~~~~~~l--~ 201 (339)
+|+ .+|++++++ ++.+.+.. .+... ....+ + ..++..+..+ +
T Consensus 273 ~Gp---g~G~l~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~ 348 (447)
T PRK00451 273 GGP---YLGFFATRK-KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPE 348 (447)
T ss_pred CCC---CchHHHhhH-HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHH
Confidence 443 367887764 55555310 01110 11111 1 1122122212 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeeccc
Q 019543 202 TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSF 281 (339)
Q Consensus 202 ~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~ 281 (339)
.+++..++..++++++.+.|+++++++.+ ++ + ....+.+.++. ...++.++|...++.+.+
T Consensus 349 g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~----~-----------~~~~~~v~~~~--~~~~~~~~L~~~gi~~~~ 409 (447)
T PRK00451 349 GLRELAEQNHQKAHYLAERLAEIGGVELF--DG----P-----------FFNEFVVRLPK--PAEEVNEALLEKGILGGY 409 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCEEec--CC----C-----------eEEEEEEecCC--CHHHHHHHHHhcCCCCCc
Confidence 35666777788899999999988876432 11 0 11122233331 245788888776664321
Q ss_pred CCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 282 GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 282 G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
-. .+ |. + + .++.+|+|++..++++.++.+.++|+++
T Consensus 410 ~~------~~----~~--~-------~-~~~~~rvs~~~~~t~e~i~~l~~~L~~~ 445 (447)
T PRK00451 410 DL------GR----YY--P-------E-LGNHLLVCVTEKRTKEDIDALVAALGEV 445 (447)
T ss_pred cc------cc----cc--C-------C-cCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 10 11 10 0 0 1358999999888888889999988753
No 255
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.41 E-value=2.3e-11 Score=116.33 Aligned_cols=238 Identities=13% Similarity=0.071 Sum_probs=143.9
Q ss_pred chHHHHHHHHHhHhCCC---eEEEcC-cHHHHHHHHH-HhcCC-CCEEEEcCCCccchHH--H-----H-H---------
Q 019543 55 PTRDALESLLAKLDKAD---RALCFT-SGMAALAAVT-HLLGT-GEEIVAGDDLYGGTDR--L-----L-S--------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~~-sG~~A~~~il-~ll~~-GD~Vi~~~~~y~~~~~--~-----~-~--------- 111 (339)
...++.++.++++++.. ++++++ ||+.++.+++ .++++ ++.|++. -.|+.... + + +
T Consensus 48 ~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~~-g~f~~~~~~~~~~~~g~~~v~~~~~~~g 126 (378)
T PRK03080 48 ALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLAW-ESFGSKWATDVVKQLKLEDPRVLEADYG 126 (378)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEEe-CHHHHHHHHHHHhhcCCCCceEeccCCC
Confidence 45678889999999962 466675 8899998644 57775 6666653 22222100 0 0 0
Q ss_pred -----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCce
Q 019543 112 -----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 162 (339)
Q Consensus 112 -----------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~ 162 (339)
++|++ ++||+++++|.+++.|...-... .+|++++|.+|+|++|.+
T Consensus 127 ~~~d~~~i~~~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~-~iD~~~~s~~K~l~~P~G-- 201 (378)
T PRK03080 127 SLPDLSAVDFDRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWS-KLDVYTFSWQKVLGGEGG-- 201 (378)
T ss_pred CCCCHhhcCCCCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHH-HCcEEEEehhhhCCCCCc--
Confidence 77877 78999999999999886532222 379999999999998643
Q ss_pred EEEEEEcChhHHHHHHHH-------------------H-Hh-cCC-CCChHHHH-HHHhchhh------HHHHHHHHHHH
Q 019543 163 AGVLAVKGERLAKELYFL-------------------Q-NA-EGS-GLAPFDCW-ICLRGVKT------MALRVEKQQDN 213 (339)
Q Consensus 163 gG~v~~~~~~l~~~l~~~-------------------~-~~-~~~-~~~~~~a~-~~~~~l~~------~~~r~~~~~~~ 213 (339)
.|+++.++ +..+++... . +. .++ ..++..+. .+..+|+. ++.+.++.++.
T Consensus 202 ~g~l~v~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l 280 (378)
T PRK03080 202 HGMAILSP-RAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAAN 280 (378)
T ss_pred eEEEEECH-HHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 57888875 455554321 0 00 111 12333222 11222222 34455666777
Q ss_pred HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC---HHHHHHHHccCCcceeecccCCcccceec
Q 019543 214 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LALSKHVVETTKYFSITVSFGSVKSLISM 290 (339)
Q Consensus 214 a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~---~~~~~~~~~~L~~~~i~v~~G~~~s~~~~ 290 (339)
++++.++|++.++++.+. + .+. ...+.+++|.+.+ ... .++...|...++.++.|+.
T Consensus 281 ~~~l~~~l~~~~~~~~~~-~----~~~--------~~s~~i~~~~~~~~~~~~~-~~~~~~l~~~~i~v~~g~~------ 340 (378)
T PRK03080 281 ASVLYDWAEKTPWATPLV-A----DPA--------TRSNTSVTLDFVDAQAAVD-AAAVAKLLRENGAVDIEPY------ 340 (378)
T ss_pred HHHHHHHHHhCCCccccc-C----Ccc--------ccCccEEEEEcCCchHHHH-HHHHHHHHHcCCeeccccc------
Confidence 888899998887543221 1 010 0123689998865 222 2344445444666665532
Q ss_pred cccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 291 PCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 291 p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+ ...+.+|+|++..++++.|+.+.++|++
T Consensus 341 ~-----------------~~~~~vRis~~~~~t~~di~~l~~al~~ 369 (378)
T PRK03080 341 R-----------------DAPNGLRIWCGPTVEPADVEALTPWLDW 369 (378)
T ss_pred c-----------------CCCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 1 0136799999998888888888887764
No 256
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.41 E-value=8e-12 Score=119.00 Aligned_cols=173 Identities=21% Similarity=0.226 Sum_probs=115.1
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcH-HHHHHH-HHHhcCCCCEEEEcCCCccchHHHH---------------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGTDRLL--------------------- 110 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG-~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~--------------------- 110 (339)
.....+.|+.+|+++|++++.+..+| +.+|.+ ++++++|||.|+++++.+-.....+
T Consensus 65 ~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~ 144 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIG 144 (417)
T ss_dssp BTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BE
T ss_pred ccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCcc
Confidence 34678999999999999999999888 567774 6679999999999987543322111
Q ss_pred ----------------H-------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-----cccCCC
Q 019543 111 ----------------S-------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-----PLELGA 144 (339)
Q Consensus 111 ----------------~-------------------------~~I~~la~~~g~~livD~a~a~g~~~~-----~~~~~~ 144 (339)
+ ++|+++|+++|++|+|||||+....+. ....|+
T Consensus 145 ~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~~ga 224 (417)
T PF01276_consen 145 GISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALALGA 224 (417)
T ss_dssp EB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSSTTS
T ss_pred CCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhhccC
Confidence 1 999999999999999999998654322 245688
Q ss_pred e-------EEEeccccccccCCCceEEEEEEcChh--HHHHHHHHHHhc-CCCCChH-HHH--HHHhch-hh-HHHHHHH
Q 019543 145 D-------IVMHSATKFIAGHSDVMAGVLAVKGER--LAKELYFLQNAE-GSGLAPF-DCW--ICLRGV-KT-MALRVEK 209 (339)
Q Consensus 145 D-------i~~~S~sK~l~g~~~~~gG~v~~~~~~--l~~~l~~~~~~~-~~~~~~~-~a~--~~~~~l-~~-~~~r~~~ 209 (339)
| +++.|.+|.+++. .++.++..++.. -.++++....++ ++..+-. .+. .+.+.+ .. =....++
T Consensus 225 d~~~~~~~~vvqS~HKtL~al--tQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~ 302 (417)
T PF01276_consen 225 DRPNDPGIIVVQSTHKTLPAL--TQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEE 302 (417)
T ss_dssp S-CTSBEEEEEEEHHHHSSS---TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred ccccccceeeeechhhccccc--ccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 9 9999999999954 578899888753 246666655544 3443322 222 123333 11 1334566
Q ss_pred HHHHHHHHHHHH---hCCCCce
Q 019543 210 QQDNAQKIAEFL---ASHPRVK 228 (339)
Q Consensus 210 ~~~~a~~l~~~L---~~~~~i~ 228 (339)
..++++.+++.+ ++.+.++
T Consensus 303 ~i~~a~~~R~~i~~~~~~~~~~ 324 (417)
T PF01276_consen 303 AIELAEEFRKKINRLNDIWGFK 324 (417)
T ss_dssp HHHHHHHHHHHHHHHCCT-SSE
T ss_pred HHHHHHHHHHHHHhcCCCceEe
Confidence 667778888888 4555544
No 257
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.40 E-value=1.8e-11 Score=120.68 Aligned_cols=99 Identities=18% Similarity=0.276 Sum_probs=71.4
Q ss_pred eEEEcCcHHHHHHH-HHH-----hcCCCCEEEEcCCCccchHHHHH----------------------------------
Q 019543 72 RALCFTSGMAALAA-VTH-----LLGTGEEIVAGDDLYGGTDRLLS---------------------------------- 111 (339)
Q Consensus 72 ~~l~~~sG~~A~~~-il~-----ll~~GD~Vi~~~~~y~~~~~~~~---------------------------------- 111 (339)
++++++++++|+.. +.+ +++|||+|++++|.|........
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~t 242 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSI 242 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCC
Confidence 57777778999874 332 68999999999998876543221
Q ss_pred ---------------------HHHHHHHHH--cCCEEEEeCCcCCCCCc--CcccC--CCeEEEeccccccccCCCceEE
Q 019543 112 ---------------------RKIAEMAHA--HGALLLVDNSIMSPVLS--RPLEL--GADIVMHSATKFIAGHSDVMAG 164 (339)
Q Consensus 112 ---------------------~~I~~la~~--~g~~livD~a~a~g~~~--~~~~~--~~Di~~~S~sK~l~g~~~~~gG 164 (339)
++|+++|++ +|++||+||+|+.-... ..... .--|++.||||+++.+|+++ |
T Consensus 243 kai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~Rl-G 321 (527)
T PRK09275 243 KALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRL-G 321 (527)
T ss_pred CEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHH-h
Confidence 889999965 59999999999754321 11111 23589999999999888664 5
Q ss_pred EEEEcCh
Q 019543 165 VLAVKGE 171 (339)
Q Consensus 165 ~v~~~~~ 171 (339)
|++++++
T Consensus 322 ~i~~~~~ 328 (527)
T PRK09275 322 VIALHED 328 (527)
T ss_pred hhhcCch
Confidence 7777764
No 258
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.39 E-value=4.8e-11 Score=116.19 Aligned_cols=180 Identities=14% Similarity=0.184 Sum_probs=103.7
Q ss_pred HHHHHHHHHcCCEEEEeCCcCC-CCCcCcc-----cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIMS-PVLSRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~-g~~~~~~-----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|+||+|.. |-.+... ....|+ .|++|.+++ | ...|++++++ ++.+.+.......+
T Consensus 231 ~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi--~t~sK~lg~-G-~pigav~~~~-~i~~~~~~~~~~~T 305 (433)
T PRK08117 231 KKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDI--MTIAKGIAS-G-LPLSAVVASK-ELMEQWPLGSHGTT 305 (433)
T ss_pred HHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCE--eehhhhccC-C-CcceeEEEcH-HHHhhccCCCCCCC
Confidence 8999999999999999999962 2212221 112354 689999984 3 4456777764 56655532221223
Q ss_pred CCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC---
Q 019543 186 SGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--- 260 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~--- 260 (339)
...+|+.+++++..|+.+. ...++.+++.+++.+.|+.+.. .+|... ..++.|.++.+++.
T Consensus 306 ~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~~----------~vrg~Gl~~gi~~~~~~ 371 (433)
T PRK08117 306 FGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKE----KHPVIG----------DVRGIGLMIGIEIVDPD 371 (433)
T ss_pred CCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh----cCCcee----------eeecCCcEEEEEEecCC
Confidence 4557887777777776552 2344455556666666654311 122100 02456677788762
Q ss_pred ---CHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 261 ---SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 261 ---~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+......+.+.+.+.|+.+.. . |-..+.+|+++.+.++++.|+.+.++|+
T Consensus 372 ~~~~~~~~~~~~~~l~~~Gv~~~~----------~---------------g~~~~~lRl~p~~~~t~~~i~~~~~~l~ 424 (433)
T PRK08117 372 GEPDGDAVEKILDKCLEKGLLFYL----------C---------------GNAGNVLRMIPPLTVTKEEIDEGLDILD 424 (433)
T ss_pred CCcchHHHHHHHHHHHHCCCEEee----------c---------------CCCCCEEEEeCCccCCHHHHHHHHHHHH
Confidence 223355667666666654321 0 0123689999776666655555555543
No 259
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.39 E-value=7.7e-12 Score=116.70 Aligned_cols=240 Identities=19% Similarity=0.294 Sum_probs=152.8
Q ss_pred CCCchHHHHHHHHHhHhC-CCeEEEcCcHHHHHHHHHH---hcC--C-CCEEEEcCCCccchH-----------------
Q 019543 52 SGNPTRDALESLLAKLDK-ADRALCFTSGMAALAAVTH---LLG--T-GEEIVAGDDLYGGTD----------------- 107 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g-~~~~l~~~sG~~A~~~il~---ll~--~-GD~Vi~~~~~y~~~~----------------- 107 (339)
+.++...+|.++|+++.+ .+.+.++|||++|+.+.+- ... | .-+||...+.|+|-.
T Consensus 81 ~~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~ 160 (404)
T COG4992 81 FYNEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFG 160 (404)
T ss_pred cCChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCC
Confidence 467888999999999996 8899999999999975442 222 2 236777776665421
Q ss_pred --------------HHHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCcc---
Q 019543 108 --------------RLLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRPL--- 140 (339)
Q Consensus 108 --------------~~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~~--- 140 (339)
..++ +++.+||++||+++|.||++. .|--++..
T Consensus 161 Pl~~g~~~vpfnDi~al~~ai~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e 240 (404)
T COG4992 161 PLLPGFRHVPFNDIEALEAAIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYE 240 (404)
T ss_pred CCCCCceecCCCCHHHHHHHhccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHH
Confidence 0000 999999999999999999982 33222221
Q ss_pred --cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH--HHHHHHHHHHHHH
Q 019543 141 --ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQK 216 (339)
Q Consensus 141 --~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~--~~r~~~~~~~a~~ 216 (339)
....||++ +.|.+||. .-.|+++++ +...+.+..-....+.+=+|+.++.+...|+.+ +...++.++...+
T Consensus 241 ~~gV~PDI~t--laK~LgGG--~PigA~la~-~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~ 315 (404)
T COG4992 241 HYGVEPDILT--LAKALGGG--FPIGAMLAT-EEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEY 315 (404)
T ss_pred HhCCCCCEEE--eeccccCC--ccceeeEEc-hhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHH
Confidence 22347765 68999974 334455554 333333221111223445788888887777765 3345555566666
Q ss_pred HHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccC
Q 019543 217 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH 296 (339)
Q Consensus 217 l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h 296 (339)
+.+.|+++.. .||.+. ..+|.|-++-+++.....+..+++.+++.|+.+...
T Consensus 316 ~~~~L~~l~~----~~~~v~----------~vRG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a-------------- 367 (404)
T COG4992 316 LLQRLRELKR----RYPLVK----------EVRGRGLMIGIELKEPYRARDIVRALREEGVLVLPA-------------- 367 (404)
T ss_pred HHHHHHHHhh----cCCcee----------eeecceeEEEEEecCcccHHHHHHHHHHCCeEEecC--------------
Confidence 7777765421 133111 136788999999866545677888888877654321
Q ss_pred CCCCHHHHHhCCCCCCeEEEEecc----CCHHHHHHHHHHHHhcC
Q 019543 297 ASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 337 (339)
Q Consensus 297 ~~~~~~~~~~~g~~~~~lRisvg~----e~~~~li~~l~~al~~~ 337 (339)
.++.|||..-+ |+.++.++.|.++|++.
T Consensus 368 -------------~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 368 -------------GPNVIRFLPPLVITEEEIDEALDALERALAAA 399 (404)
T ss_pred -------------CCCeEEecCCccCCHHHHHHHHHHHHHHHHHh
Confidence 23578887765 56666677777776643
No 260
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.38 E-value=3.1e-11 Score=116.03 Aligned_cols=176 Identities=17% Similarity=0.177 Sum_probs=105.6
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhc-
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE- 184 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~- 184 (339)
++|.++|++||+++|+||+|. .|-.+.. .....|++ +++|.+++. ...|.+++++ ++...... ...
T Consensus 203 ~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~--t~gK~lg~G--~p~~av~~~~-~i~~~~~~--~~~~ 275 (395)
T PRK03715 203 QQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIM--TLGKGIGGG--VPLAALLAKA-EVAVFEAG--DQGG 275 (395)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCcee--eehhhhhCC--cceEEEEEcc-ccccccCC--CcCC
Confidence 899999999999999999985 2222221 12345864 578999963 3355666665 44321111 112
Q ss_pred CCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH
Q 019543 185 GSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 262 (339)
Q Consensus 185 ~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~ 262 (339)
+..-+|..+++++..|+.+. ..+++.+++.+++.+.|+++.. .++ +.. .+|.|.++++++.+.
T Consensus 276 T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~-i~~----------vrG~Glm~~i~l~~~ 340 (395)
T PRK03715 276 TYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSE----ERG-LEG----------ERGEGLLRALLLGKD 340 (395)
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh----cCC-cCe----------EEcceeEEEEEecCc
Confidence 23456887777777777663 3466666777777777765311 011 110 245789999998653
Q ss_pred --HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 263 --ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 263 --~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+.+.+..+...|+.+. .+ ....|||++.+..+++.|+.+.++|++
T Consensus 341 ~~~~~~~~~~~~~~~Gi~~~---------~~------------------~~~~lR~~p~l~~t~~ei~~~~~~l~~ 389 (395)
T PRK03715 341 IGPQIVEKARDMQPDGLLLN---------AP------------------RPNLLRFMPALNVTTEEIDQMIAMLRS 389 (395)
T ss_pred hHHHHHHHHHhccCCCEEEe---------ec------------------CCCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 233344444444355432 11 225799999987777777766666653
No 261
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.38 E-value=5.3e-11 Score=116.30 Aligned_cols=241 Identities=17% Similarity=0.214 Sum_probs=144.6
Q ss_pred CCchHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHHHh---cC--CC-CEEEEcCCCccchH-----------------
Q 019543 53 GNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---LG--TG-EEIVAGDDLYGGTD----------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il~l---l~--~G-D~Vi~~~~~y~~~~----------------- 107 (339)
.++...+|.++|+++... +.+.+++||+.|+.+.+.+ .. .| ..|++....|+|..
T Consensus 122 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 201 (459)
T PRK11522 122 LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFM 201 (459)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCC
Confidence 356677788888887643 4788899999999754332 21 12 35666555554421
Q ss_pred ------------------HHHH-------------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCc
Q 019543 108 ------------------RLLS-------------------------------RKIAEMAHAHGALLLVDNSIM-SPVLS 137 (339)
Q Consensus 108 ------------------~~~~-------------------------------~~I~~la~~~g~~livD~a~a-~g~~~ 137 (339)
..+. +++.++|++||+++|+||+|. .|-.+
T Consensus 202 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG 281 (459)
T PRK11522 202 PLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTG 281 (459)
T ss_pred CCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccc
Confidence 0110 899999999999999999993 32222
Q ss_pred Cc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCC--ChHHHHHHHhchhhHH--HHHH
Q 019543 138 RP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKTMA--LRVE 208 (339)
Q Consensus 138 ~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~--~~~~a~~~~~~l~~~~--~r~~ 208 (339)
.. .....|++ +++|.+++.--.+|+++ +++ ++.+.+......++.+. +|..++.++..|+.+. ...+
T Consensus 282 ~~~a~e~~gv~PDiv--t~gK~lggG~~Pigav~-~~~-~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~ 357 (459)
T PRK11522 282 KMFACEHENVQPDIL--CLAKALGGGVMPIGATI-ATE-EVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPA 357 (459)
T ss_pred hhhhhhccCCCCCEE--EechhhhCCCccceeEE-EcH-HHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHH
Confidence 21 12235876 67999995211245555 443 55554421111233333 7888877777777653 3455
Q ss_pred HHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccce
Q 019543 209 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLI 288 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~ 288 (339)
+.+++.+++.+.|+++.. .+|..-. ..+|.|.++.+++.+.+.+..+.+.|.+.|+.+....
T Consensus 358 ~~~~~g~~l~~~L~~l~~----~~~~~i~---------~VrG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~----- 419 (459)
T PRK11522 358 QAEQKGDYLLDGFRQLAR----EYPDLVQ---------EARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTL----- 419 (459)
T ss_pred HHHHHHHHHHHHHHHHHH----hCCCcee---------eEEeceeEEEEEecCchHHHHHHHHHHHCCeEEEecC-----
Confidence 666667777777765310 1221000 0245788999998765556778888877777654110
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
...+.+|+++.+..+++.|+.+.++|+
T Consensus 420 --------------------~~~~~lr~~Ppl~~t~~~id~~l~~l~ 446 (459)
T PRK11522 420 --------------------NNAKTIRIEPPLTLTIEQCEQVLKAAR 446 (459)
T ss_pred --------------------CCCCEEEEECCccCCHHHHHHHHHHHH
Confidence 123679999887666655555555543
No 262
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.38 E-value=4.6e-11 Score=114.15 Aligned_cols=230 Identities=18% Similarity=0.194 Sum_probs=139.0
Q ss_pred chHHHHHHHHHhHh-CCC--eEEEcCcHHHHHHHHHHh---cCCCCEEEEcCCCccchH---------------------
Q 019543 55 PTRDALESLLAKLD-KAD--RALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTD--------------------- 107 (339)
Q Consensus 55 ~~~~~le~~la~~~-g~~--~~l~~~sG~~A~~~il~l---l~~GD~Vi~~~~~y~~~~--------------------- 107 (339)
..+..+++++++.+ +.. .+++++||++|+.+.+.+ ...+++|++.+..|+|..
T Consensus 66 ~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~ 145 (375)
T PRK04260 66 LYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVP 145 (375)
T ss_pred ccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCC
Confidence 34556777788754 322 357889999999754432 355678888776666421
Q ss_pred ----------HHHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCcc-----cC
Q 019543 108 ----------RLLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRPL-----EL 142 (339)
Q Consensus 108 ----------~~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~~-----~~ 142 (339)
..++ ++|.++|+++|+++|+||+|. .|..+.+. ..
T Consensus 146 ~~~~~~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~ 225 (375)
T PRK04260 146 HFSYAIFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI 225 (375)
T ss_pred CeEEeCCCCHHHHHHhcCCCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC
Confidence 0000 899999999999999999984 22222221 12
Q ss_pred CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH--HHHHHHHHHHHHHHHHH
Q 019543 143 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEF 220 (339)
Q Consensus 143 ~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~--~~r~~~~~~~a~~l~~~ 220 (339)
..|++ ||||++++ | ...|++++++ ++.+.+...........+|..++.+...|+.+ +..+++.+++.+++++.
T Consensus 226 ~pdi~--t~sK~l~~-G-~~ig~~~~~~-~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~ 300 (375)
T PRK04260 226 EPDIF--TLAKGLAN-G-VPVGAMLAKS-SLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQ 300 (375)
T ss_pred CCCEE--EecccccC-C-cceEEEEEcH-HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 34644 89999984 3 4567777764 56555532211223444677766666666554 23445555555565555
Q ss_pred HhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccC
Q 019543 221 LAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH 296 (339)
Q Consensus 221 L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h 296 (339)
+.+ ++.+.. .++.|.++++.+.. ...+|.+.+...|+.+. |.
T Consensus 301 l~~~~~~~~~~~~------------------~~~~g~~~~~~~~~--~~~~~~~~l~~~Gi~v~----------~~---- 346 (375)
T PRK04260 301 LQKALQDKETVTT------------------VRGLGYMIGIETTA--DLSQLVEAARDKGLIVL----------TA---- 346 (375)
T ss_pred HHHHHhhCCCeeE------------------EeccceEEEEEecC--cHHHHHHHHHhCCCEEe----------cC----
Confidence 543 222111 12357788888732 24567777776666542 10
Q ss_pred CCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 297 ASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 297 ~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+.+|+++.+..+++.++.+.+.+++
T Consensus 347 -------------~~~~lR~~~~~~~t~~~i~~~l~~l~~ 373 (375)
T PRK04260 347 -------------GTNVIRLLPPLTLTKEEIEQGIAILSE 373 (375)
T ss_pred -------------CCCEEEEcCCCccCHHHHHHHHHHHHH
Confidence 236799999887777777777776654
No 263
>PLN00144 acetylornithine transaminase
Probab=99.38 E-value=3.4e-11 Score=115.29 Aligned_cols=233 Identities=18% Similarity=0.228 Sum_probs=138.9
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHh----cC------C------CCEEEEcCCCccchH---------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL----LG------T------GEEIVAGDDLYGGTD--------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~l----l~------~------GD~Vi~~~~~y~~~~--------- 107 (339)
.++...+|.++|++..+.+.+.+++||++|+...+.+ .+ + ..+|+.-...|+|..
T Consensus 55 ~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~ 134 (382)
T PLN00144 55 HTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSK 134 (382)
T ss_pred cCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCC
Confidence 3666778888888877777899999999999743322 11 1 245766555554421
Q ss_pred ----------------------H----HHH--------------------------HHHHHHHHHcCCEEEEeCCcC-CC
Q 019543 108 ----------------------R----LLS--------------------------RKIAEMAHAHGALLLVDNSIM-SP 134 (339)
Q Consensus 108 ----------------------~----~~~--------------------------~~I~~la~~~g~~livD~a~a-~g 134 (339)
. .+. ++|.++|++||+++|+||++. .|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~g 214 (382)
T PLN00144 135 EQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLG 214 (382)
T ss_pred ccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 0 000 899999999999999999984 22
Q ss_pred CCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHH--HHH
Q 019543 135 VLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRV 207 (339)
Q Consensus 135 ~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~--~r~ 207 (339)
..+.. .....| +.|++|.+++ | ...|++++++ ++.+.+.......+...+|+.++++...|+.+. ...
T Consensus 215 r~g~~~~~~~~~~~PD--i~t~sK~l~~-G-~pig~v~~~~-~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~ 289 (382)
T PLN00144 215 RTGYLWAHEAYGVEPD--IMTLAKPLAG-G-LPIGAVLVTE-KVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFL 289 (382)
T ss_pred ccchHhhhhhcCCCCC--EEEecccccC-C-cceEEEEEcH-HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHH
Confidence 22222 122346 6778999985 3 5677888764 676666432223455667887777765554442 122
Q ss_pred HHHHHHHHHHHHH----HhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCC
Q 019543 208 EKQQDNAQKIAEF----LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGS 283 (339)
Q Consensus 208 ~~~~~~a~~l~~~----L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~ 283 (339)
++.++..+++.+. ++++|.+.. .++.|.++++++.. .+.+|.+.+...|+.+..++
T Consensus 290 ~~~~~~g~~l~~~l~~~~~~~~~~~~------------------vrg~G~~~~l~l~~--~~~~~~~~~~~~Gv~i~~~~ 349 (382)
T PLN00144 290 ASVAKKGEYLRELLRRKLGGNPHVKE------------------VRGVGLLVGIQLDV--PAGPLVDACRDSGLLVLTAG 349 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcee------------------eecCceEEEEEecC--ccHHHHHHHHHCCeEEeecC
Confidence 2333333344343 333332221 13467899998832 23567777777676553220
Q ss_pred cccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHH----HHHHHHHHHhc
Q 019543 284 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVND----LISDLDKALRT 336 (339)
Q Consensus 284 ~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~----li~~l~~al~~ 336 (339)
..+.||+++.+..+++ .++.|.++|++
T Consensus 350 --------------------------~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 350 --------------------------KGDVVRLVPPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred --------------------------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHh
Confidence 1267999998833344 44455555543
No 264
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.37 E-value=7.3e-11 Score=114.62 Aligned_cols=177 Identities=15% Similarity=0.199 Sum_probs=103.6
Q ss_pred HHHHHHHHHcCCEEEEeCCcCC-CCCcCcc---cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCC
Q 019543 112 RKIAEMAHAHGALLLVDNSIMS-PVLSRPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 187 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~-g~~~~~~---~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~ 187 (339)
++|.++|++||+++|+||++.. +..+... ..+.+.-+.||||.+++ | ...|++++++ ++++.+.......+..
T Consensus 223 ~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~-G-~rig~v~~~~-~~~~~~~~~~~~~t~~ 299 (425)
T PRK08088 223 QRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAG-G-FPLAGVTGRA-EVMDAIAPGGLGGTYA 299 (425)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEeccccC-C-CcceeeEecH-HHHhhcCCCCCCCCCC
Confidence 8999999999999999999862 2222211 12333446899999984 4 5567888764 6777665433334456
Q ss_pred CChHHHHHHHhchhhH--HHHHHHHHHHHHHHHHHHh----CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-
Q 019543 188 LAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG- 260 (339)
Q Consensus 188 ~~~~~a~~~~~~l~~~--~~r~~~~~~~a~~l~~~L~----~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~- 260 (339)
.+|+..+++...|+.. +..+++.++..+++.+.|+ .+|.+..+ ++.|.++++.+.
T Consensus 300 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v------------------~g~G~~~~l~l~~ 361 (425)
T PRK08088 300 GNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDV------------------RGLGAMIAIELFE 361 (425)
T ss_pred cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------eccceEEEEEEec
Confidence 6777776666666543 2223333333444444443 33332222 235788999872
Q ss_pred -------CHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHH
Q 019543 261 -------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKA 333 (339)
Q Consensus 261 -------~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~a 333 (339)
+...+.++.+.+.+.|+.+..++ ...+.||+++.+..+++.|+...+.
T Consensus 362 ~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~-------------------------~~~~~iRl~~~~~~t~~ei~~~i~~ 416 (425)
T PRK08088 362 DGDHSKPNAKLTAQIVARARDKGLILLSCG-------------------------PYYNVLRILVPLTIEDAQIRQGLEI 416 (425)
T ss_pred CCCCCCCCHHHHHHHHHHHHhCCCEEecCC-------------------------CCCCEEEEECCCCcCHHHHHHHHHH
Confidence 23346677777766665432110 0136799999875544444443333
Q ss_pred H
Q 019543 334 L 334 (339)
Q Consensus 334 l 334 (339)
|
T Consensus 417 l 417 (425)
T PRK08088 417 I 417 (425)
T ss_pred H
Confidence 3
No 265
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.37 E-value=5.1e-11 Score=117.27 Aligned_cols=99 Identities=17% Similarity=0.238 Sum_probs=70.3
Q ss_pred eEEEcCcHHHHHHHH-HH-----hcCCCCEEEEcCCCccchHHH-------------------------H-------H--
Q 019543 72 RALCFTSGMAALAAV-TH-----LLGTGEEIVAGDDLYGGTDRL-------------------------L-------S-- 111 (339)
Q Consensus 72 ~~l~~~sG~~A~~~i-l~-----ll~~GD~Vi~~~~~y~~~~~~-------------------------~-------~-- 111 (339)
++++++++++|+..+ .+ ++.|||+|++++|.|+..... + .
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~ 236 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKL 236 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHh
Confidence 577777889998743 33 689999999999987543211 1 0
Q ss_pred --------------------------HHHHHHHHHc--CCEEEEeCCcCCCCCc--CcccC--CCeEEEeccccccccCC
Q 019543 112 --------------------------RKIAEMAHAH--GALLLVDNSIMSPVLS--RPLEL--GADIVMHSATKFIAGHS 159 (339)
Q Consensus 112 --------------------------~~I~~la~~~--g~~livD~a~a~g~~~--~~~~~--~~Di~~~S~sK~l~g~~ 159 (339)
++|+++|++| |++||+||+|+..... ..... .--|+++||||+++.+|
T Consensus 237 ~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G 316 (521)
T TIGR03801 237 RDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGATG 316 (521)
T ss_pred cCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCch
Confidence 8889999987 9999999999753321 11111 12489999999999888
Q ss_pred CceEEEEEEcCh
Q 019543 160 DVMAGVLAVKGE 171 (339)
Q Consensus 160 ~~~gG~v~~~~~ 171 (339)
+++ |+++++++
T Consensus 317 ~Rl-G~i~~~~~ 327 (521)
T TIGR03801 317 WRL-GTIALHKD 327 (521)
T ss_pred hhh-hhhhcCch
Confidence 765 67777653
No 266
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.37 E-value=7.7e-12 Score=117.33 Aligned_cols=119 Identities=24% Similarity=0.228 Sum_probs=92.4
Q ss_pred cccCCCCchHHHHHHHHHhHhCCC--eEEEcCcH-HHHHHHHHH--hcCCCC----EEEEcCCCccchHHHHH-------
Q 019543 48 DYTRSGNPTRDALESLLAKLDKAD--RALCFTSG-MAALAAVTH--LLGTGE----EIVAGDDLYGGTDRLLS------- 111 (339)
Q Consensus 48 ~y~r~~~~~~~~le~~la~~~g~~--~~l~~~sG-~~A~~~il~--ll~~GD----~Vi~~~~~y~~~~~~~~------- 111 (339)
.|++...+..++.++.+|++.+++ + ++|++| |.++.+++. ...++| +||+.+..|+.....++
T Consensus 78 ~y~w~~~~~~E~aR~~VAklInAd~~d-IiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~ 156 (428)
T KOG1549|consen 78 SYGWKAEDAVEAAREQVAKLINADPSD-IVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGL 156 (428)
T ss_pred ccchhhhHHHHHHHHHHHHHhCCCCCc-EEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCe
Confidence 355555566899999999999985 5 555555 899886554 355788 99988776654432111
Q ss_pred --------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeE
Q 019543 112 --------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADI 146 (339)
Q Consensus 112 --------------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di 146 (339)
++|.++|++.|+.+++|.||+.|.. .+.-+.++|+
T Consensus 157 ~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~ 236 (428)
T KOG1549|consen 157 EVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADF 236 (428)
T ss_pred EEEEeccCccccccHHHHHHhcCCCceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHcCchh
Confidence 9999999999999999999999965 4666789999
Q ss_pred EEeccccccccCCCceEEEEEEcC
Q 019543 147 VMHSATKFIAGHSDVMAGVLAVKG 170 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~~~ 170 (339)
++.|.+|++|.++ .|++.+++
T Consensus 237 ~s~s~HK~ygp~~---iGaLYvr~ 257 (428)
T KOG1549|consen 237 LSISAHKIYGPPG---IGALYVRR 257 (428)
T ss_pred eeeecccccCCCc---ceEEEEcc
Confidence 9999999999775 47888875
No 267
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.36 E-value=5.3e-11 Score=115.55 Aligned_cols=178 Identities=11% Similarity=0.125 Sum_probs=110.1
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH---HH
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL---QN 182 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~---~~ 182 (339)
++|.++|++||+++|+||+|. .|..+.. .....|++ +++|+++|.. ...|+++++ +++.+.+... ..
T Consensus 224 ~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~--~~~K~l~gG~-~p~~av~~~-~~i~~~~~~~~~~~~ 299 (423)
T PRK05964 224 AELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIM--CLSKGLTGGY-LPLAATLCT-AEIFEAFYSDDRAKA 299 (423)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCee--eeehhhhcCc-ccceEEEEc-HHHHHhhhcCCcccc
Confidence 899999999999999999983 3322221 12245765 5689998532 234556665 4677666421 11
Q ss_pred -hcC--CCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEE
Q 019543 183 -AEG--SGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 257 (339)
Q Consensus 183 -~~~--~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~ 257 (339)
..+ ...+|+.++.+...++.+. ...++..++.+++.+.|+++.. +|.+.. .++.|.++.|
T Consensus 300 ~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~-----~~~i~~----------vrg~Gl~~~i 364 (423)
T PRK05964 300 FMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRD-----LPGVAD----------VRVLGAIGAV 364 (423)
T ss_pred cccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcc-----CCCeEE----------eecccEEEEE
Confidence 122 2457777777766666542 3456666777788887775422 222110 1356788899
Q ss_pred eeCCHH---HHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 258 LTGSLA---LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 258 ~~~~~~---~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
.+.+.. ...++.+.|...|+.++ | ..+.|||+..+.++++.|+.+.++|
T Consensus 365 ~l~~~~~~~~~~~l~~~l~~~Gv~v~----------~------------------~~~~lR~~p~l~~t~edId~~v~~l 416 (423)
T PRK05964 365 ELDRPVLERDGPALRAFALERGVLLR----------P------------------LGNTIYLMPPYIITAEELDRITDAI 416 (423)
T ss_pred EeccCcchhHHHHHHHHHHHCCeEEE----------e------------------cCCEEEEeCCcccCHHHHHHHHHHH
Confidence 885432 35677777776666543 1 1146999988877777777666666
Q ss_pred hc
Q 019543 335 RT 336 (339)
Q Consensus 335 ~~ 336 (339)
++
T Consensus 417 ~~ 418 (423)
T PRK05964 417 VE 418 (423)
T ss_pred HH
Confidence 53
No 268
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.35 E-value=1.1e-11 Score=110.15 Aligned_cols=212 Identities=22% Similarity=0.276 Sum_probs=134.8
Q ss_pred CCCcccCCCCchHHHHHHHHHhHhCCCeEEE---cCcHHHHHHH-HHHhcCCCCEEEEcC-CCccchHHHHH--------
Q 019543 45 GPYDYTRSGNPTRDALESLLAKLDKADRALC---FTSGMAALAA-VTHLLGTGEEIVAGD-DLYGGTDRLLS-------- 111 (339)
Q Consensus 45 ~~~~y~r~~~~~~~~le~~la~~~g~~~~l~---~~sG~~A~~~-il~ll~~GD~Vi~~~-~~y~~~~~~~~-------- 111 (339)
.+|.|+.. -++.||+-+|+.+|+|.+++ +-||++|+.. +..+++|||+.+.-. .-|+....++.
T Consensus 58 tGYGydD~---GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gS 134 (416)
T COG4100 58 TGYGYDDL---GRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGS 134 (416)
T ss_pred CCCCcccc---chhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCccc
Confidence 45666644 56789999999999999887 7799999985 556999999987632 23432221110
Q ss_pred ------------------------------------------------------HHHHHHHHHc--CCEEEEeCCcCCCC
Q 019543 112 ------------------------------------------------------RKIAEMAHAH--GALLLVDNSIMSPV 135 (339)
Q Consensus 112 ------------------------------------------------------~~I~~la~~~--g~~livD~a~a~g~ 135 (339)
++++++.|+. |++++||++++..+
T Consensus 135 L~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFv 214 (416)
T COG4100 135 LKDFGIKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFV 214 (416)
T ss_pred HHHhCcceeecccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhh
Confidence 6667777765 78999999998776
Q ss_pred C-cCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCC----CCChHHHHHHHhchhhHHHHHHHH
Q 019543 136 L-SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS----GLAPFDCWICLRGVKTMALRVEKQ 210 (339)
Q Consensus 136 ~-~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~----~~~~~~a~~~~~~l~~~~~r~~~~ 210 (339)
. ..|...|+|+..+|+-|..||.-...||+++++. ++++.........|. +.+-.....+.+++=-.+.-..+.
T Consensus 215 E~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~-~~ve~~~yRlTaPGIG~e~Gat~~~l~~myqGlFlAPhvv~qa 293 (416)
T COG4100 215 EEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKA-ELVEAAAYRLTAPGIGREGGATLYSLREMYQGLFLAPHVVSQA 293 (416)
T ss_pred hccCccccchhhhccceeeCCCCceeeccceeechH-HHHHhhceeeecCCccccccccHHHHHHHHhhhccchHHHHHH
Confidence 4 4577789999999999999987666799998874 676654321100110 000001111222222223334444
Q ss_pred HHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCc
Q 019543 211 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY 274 (339)
Q Consensus 211 ~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~ 274 (339)
.+-+...+..|..+. +| .+|-+.- .-.--|.++.+++.++..+|+++++.
T Consensus 294 ~Kga~fta~~le~lg------~~---~~P~~~~-----kRtDlIQavkf~~~eKmIaFcqaiQ~ 343 (416)
T COG4100 294 VKGAHFTARFLEKLG------FP---VNPKYDA-----KRTDLIQAVKFGSKEKMIAFCQAIQA 343 (416)
T ss_pred hhhhHHHHHHHHHcC------CC---CCCcccc-----cccchhhheecCCHHHHHHHHHHHhh
Confidence 455556666666542 22 2221110 11235788889999999999998765
No 269
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.35 E-value=6.3e-11 Score=112.00 Aligned_cols=238 Identities=15% Similarity=0.056 Sum_probs=144.5
Q ss_pred chHHHHHHHHHhHhCC-C--eEEEcCc-HHHHHHH-HHHhcCCCCEEEEcCCCccchHH---------------------
Q 019543 55 PTRDALESLLAKLDKA-D--RALCFTS-GMAALAA-VTHLLGTGEEIVAGDDLYGGTDR--------------------- 108 (339)
Q Consensus 55 ~~~~~le~~la~~~g~-~--~~l~~~s-G~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~--------------------- 108 (339)
...+++++.++++++. + .++++++ |+.|+.+ +..++++||.+++-.....+.+.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~ 116 (349)
T TIGR01364 37 AVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKYGVVNVVASGKEGNY 116 (349)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCcEEEeccccCCC
Confidence 4678889999999995 2 4666654 8999985 55688899987775432221110
Q ss_pred -----H--HH------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccccCCCce
Q 019543 109 -----L--LS------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVM 162 (339)
Q Consensus 109 -----~--~~------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g~~~~~ 162 (339)
+ +. -..-++++.++++++||.+++.|... +... .|++++|.+|++|.+|
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~~l~~~~~~l~iVDavss~g~~~id~~~--~d~~~~ssqK~lgP~G--- 191 (349)
T TIGR01364 117 TKIPDPSTWEISEDAAYVHYCANETIHGVEFRELPDVKNAPLVADMSSNILSRPIDVSK--FGLIYAGAQKNIGPAG--- 191 (349)
T ss_pred CCCCCHHhcCCCCCCCEEEEcCCCCcccEecceecccCCCeEEEEccccccCccCCHHH--ccEEEEecccccCCCc---
Confidence 0 00 11236788899999999999887642 2222 4699999999997443
Q ss_pred EEEEEEcChhHHHHHHH-------HHH----hcCCCCChHHHHH-HHhchh------hHHHHHHHHHHHHHHHHHHHhCC
Q 019543 163 AGVLAVKGERLAKELYF-------LQN----AEGSGLAPFDCWI-CLRGVK------TMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 163 gG~v~~~~~~l~~~l~~-------~~~----~~~~~~~~~~a~~-~~~~l~------~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
.|+++.++ +..+++.. +.. ......++..... +..+|+ .++.+.++.+++++++.++|++.
T Consensus 192 lg~l~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~ 270 (349)
T TIGR01364 192 LTVVIVRK-DLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNS 270 (349)
T ss_pred eEEEEECH-HHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 46777775 45554421 110 1112233333222 222222 25666777778899999999998
Q ss_pred CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHH
Q 019543 225 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVR 304 (339)
Q Consensus 225 ~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~ 304 (339)
+++. .+.. .+.. + ...+++|.+++.....++.+.+...|+.+..|..
T Consensus 271 ~gl~---~~~~--~~~~-------r-s~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~-------------------- 317 (349)
T TIGR01364 271 NGFY---RNPV--DPRN-------R-SRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHR-------------------- 317 (349)
T ss_pred CCee---ccCC--CHHH-------c-CCeEEEEecCChhHhHHHHHHHHHCCCcccCCcc--------------------
Confidence 7632 1111 1100 1 2367899876542124454555455553222210
Q ss_pred HhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 305 QARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 305 ~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+.+|+|++..++++.|+.|.++|++
T Consensus 318 -----~~g~vRvS~~~~nt~edid~l~~al~~ 344 (349)
T TIGR01364 318 -----SVGGMRASIYNAMPLEGVQALVDFMKE 344 (349)
T ss_pred -----ccCeeEEECcCCCCHHHHHHHHHHHHH
Confidence 125799999999988889999998875
No 270
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.35 E-value=9.4e-11 Score=113.09 Aligned_cols=209 Identities=14% Similarity=0.193 Sum_probs=126.0
Q ss_pred CchHHHHHHHHHhHhC-CCeEEEcCcHHHHHHHHHHh---c----C--C-CCEEEEcCCCccchHH--------------
Q 019543 54 NPTRDALESLLAKLDK-ADRALCFTSGMAALAAVTHL---L----G--T-GEEIVAGDDLYGGTDR-------------- 108 (339)
Q Consensus 54 ~~~~~~le~~la~~~g-~~~~l~~~sG~~A~~~il~l---l----~--~-GD~Vi~~~~~y~~~~~-------------- 108 (339)
++...+|.++|.++.+ .+.+.+++||++|+...+.+ . + + ...|+.-...|+|...
T Consensus 81 ~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 160 (408)
T PRK04612 81 SAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEG 160 (408)
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccC
Confidence 4445566777776653 36788999999999743322 1 1 1 2467776555554310
Q ss_pred ---------------------HHH--------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCcc
Q 019543 109 ---------------------LLS--------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRPL 140 (339)
Q Consensus 109 ---------------------~~~--------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~~ 140 (339)
.+. ++|.++|++||+++|+||+|. .|..+...
T Consensus 161 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~ 240 (408)
T PRK04612 161 YEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF 240 (408)
T ss_pred CCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh
Confidence 000 899999999999999999985 32222211
Q ss_pred ---cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHH--HHHHHHHHHHH
Q 019543 141 ---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQ 215 (339)
Q Consensus 141 ---~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~ 215 (339)
..+....+.|++|.+++ |.. .|++++++ ++.+.+.......+.+.+|..++++...|+.+. ...++.++..+
T Consensus 241 a~~~~~~~pdi~t~~K~l~~-G~p-iga~~~~~-~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~ 317 (408)
T PRK04612 241 AHWQEQVTPDIVTLAKALGG-GFP-IGAMLAGP-KVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSA 317 (408)
T ss_pred hhhhcCCCCCEEEEcchhcC-CCc-eEEEEECH-HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 12345566788999984 434 45666654 566655432222344567887777777776653 34555566667
Q ss_pred HHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--HHHHHHHHccCCcceeec
Q 019543 216 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITV 279 (339)
Q Consensus 216 ~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--~~~~~~~~~~L~~~~i~v 279 (339)
++.+.|+++.. .++... ..+|.|.++.+++.. ...+..+++.+.+.|+.+
T Consensus 318 ~l~~~l~~l~~----~~~~i~----------~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv 369 (408)
T PRK04612 318 ALRAGLEALNA----EFGVFA----------QVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLL 369 (408)
T ss_pred HHHHHHHHHHh----hCCCee----------eeeccceEEEEEecCchhhHHHHHHHHHHHCCeEE
Confidence 77777765321 011100 024678899998742 344567777777766654
No 271
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.34 E-value=4.4e-11 Score=124.85 Aligned_cols=243 Identities=18% Similarity=0.159 Sum_probs=148.1
Q ss_pred hHHHHHHHHHhHhCCCeEEEcCcHH----HHHHH-HHHhcCC-CC----EEEEcCCCccchHHHHH--------------
Q 019543 56 TRDALESLLAKLDKADRALCFTSGM----AALAA-VTHLLGT-GE----EIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~~~l~~~sG~----~A~~~-il~ll~~-GD----~Vi~~~~~y~~~~~~~~-------------- 111 (339)
...++++.+++++|.+.+.+.++.+ .|+.. +..+.++ || +|+++...++.+...+.
T Consensus 569 ~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~ 648 (993)
T PLN02414 569 MFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAK 648 (993)
T ss_pred HHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCC
Confidence 4679999999999998777777666 45554 4456666 88 89988765443321111
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCC--CcCcccCCCeEEEeccc
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPV--LSRPLELGADIVMHSAT 152 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~--~~~~~~~~~Di~~~S~s 152 (339)
++|+++||++|+.+++|.++..+. ..++...|+||+++|.+
T Consensus 649 G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~H 728 (993)
T PLN02414 649 GNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLH 728 (993)
T ss_pred CCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEecCC
Confidence 899999999999999999996654 23556789999999999
Q ss_pred cccccC---CCceEEEEEEcChhHHHHHHHH---------HH----hcCCCC-ChHH---------HHHHHhchhhHHHH
Q 019543 153 KFIAGH---SDVMAGVLAVKGERLAKELYFL---------QN----AEGSGL-APFD---------CWICLRGVKTMALR 206 (339)
Q Consensus 153 K~l~g~---~~~~gG~v~~~~~~l~~~l~~~---------~~----~~~~~~-~~~~---------a~~~~~~l~~~~~r 206 (339)
|+|++| |+...|++++++ .+...+-.. ++ ..|+.- +++. +++...+-+.+.+-
T Consensus 729 K~f~~P~G~GGPg~G~l~~~~-~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~ 807 (993)
T PLN02414 729 KTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDA 807 (993)
T ss_pred ccCCcCcccCCCCeeeEEEch-hhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHH
Confidence 988855 233467887764 454433211 00 112211 1221 11112222334444
Q ss_pred HHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEe-eCC--HHHHHHHHccCCcceeecccCC
Q 019543 207 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-TGS--LALSKHVVETTKYFSITVSFGS 283 (339)
Q Consensus 207 ~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~-~~~--~~~~~~~~~~L~~~~i~v~~G~ 283 (339)
.++...|+.++++.|+...++ .|++-+..-.| -.++.+. +++ ...+..+.++|..+|+....
T Consensus 808 a~~a~~nAnYl~~rL~~~~~~---~~~~~~~~~~h----------Efv~~~~~l~~~~g~~~~di~krL~d~Gihapt-- 872 (993)
T PLN02414 808 SKIAILNANYMAKRLEGHYPV---LFRGKNGTCAH----------EFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPT-- 872 (993)
T ss_pred HHHHHHHHHHHHHHHHhhCCc---cccCCCCCeee----------eEEEeccccccccCCCHHHHHHHHHHcCcEEee--
Confidence 455667889999999775433 23221100011 1233332 211 02235677777666653221
Q ss_pred cccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 284 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 284 ~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+.+| .++.+||+++..+.++.+|.|.+++++
T Consensus 873 ----~~~p------------------v~~~lmiepTE~~skeelDrf~~al~~ 903 (993)
T PLN02414 873 ----MSWP------------------VPGTLMIEPTESESKAELDRFCDALIS 903 (993)
T ss_pred ----eccc------------------cCCEEEEEeeeeCCHHHHHHHHHHHHH
Confidence 1112 247899999999999999999999865
No 272
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.31 E-value=7.3e-10 Score=101.65 Aligned_cols=176 Identities=15% Similarity=0.057 Sum_probs=112.2
Q ss_pred HHHHHHHHHhHh--------CCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 57 RDALESLLAKLD--------KADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~--------g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
+...++++|++. .++++++++++.+|+.. +.+|.+||-.|++++|.|+-......
T Consensus 105 ~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~ 184 (447)
T KOG0259|consen 105 ILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKD 184 (447)
T ss_pred cHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCccc
Confidence 334555555552 25678888888999985 55689999999999997653321111
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-c---cc-C---CCeE
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-P---LE-L---GADI 146 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-~---~~-~---~~Di 146 (339)
++|+++|+|+|+++|.||.|+-.++++ + ++ + -.-+
T Consensus 185 weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVi 264 (447)
T KOG0259|consen 185 WEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVI 264 (447)
T ss_pred ceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceE
Confidence 999999999999999999997665542 2 11 1 1147
Q ss_pred EEeccccccccCCCceEEEEEEcCh-hHHH---HHHHHHHhcCCCCCh--HHHHHHHhchh-----hHHHHHHHHHHHHH
Q 019543 147 VMHSATKFIAGHSDVMAGVLAVKGE-RLAK---ELYFLQNAEGSGLAP--FDCWICLRGVK-----TMALRVEKQQDNAQ 215 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~~~~-~l~~---~l~~~~~~~~~~~~~--~~a~~~~~~l~-----~~~~r~~~~~~~a~ 215 (339)
.+++.||-.=-|||++|+ ++..+. .... .+..+.++......| +...++-.-|+ -+..++.-+..|++
T Consensus 265 tlggisKrW~VPGWRlGW-i~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~ 343 (447)
T KOG0259|consen 265 TLGGISKRWIVPGWRLGW-IALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNAD 343 (447)
T ss_pred eecccccccccCCceeee-EEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHH
Confidence 789999998888988765 544432 1111 112233333322223 22222222222 24666777889999
Q ss_pred HHHHHHhCCCCceEEecC
Q 019543 216 KIAEFLASHPRVKKVNYA 233 (339)
Q Consensus 216 ~l~~~L~~~~~i~~v~~p 233 (339)
...++|++.|.+.+..-|
T Consensus 344 l~y~~Lk~IP~l~cp~kP 361 (447)
T KOG0259|consen 344 LCYSRLKDIPCLTCPVKP 361 (447)
T ss_pred HHHHHHhcCCCcccCcCC
Confidence 999999999987643333
No 273
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.31 E-value=1.2e-10 Score=110.71 Aligned_cols=234 Identities=16% Similarity=0.109 Sum_probs=141.6
Q ss_pred chHHHHHHHHHhHhCC-C--eEEEc-CcHHHHHHH-HHHhcCCCCEEEEcCCCccchH----------------------
Q 019543 55 PTRDALESLLAKLDKA-D--RALCF-TSGMAALAA-VTHLLGTGEEIVAGDDLYGGTD---------------------- 107 (339)
Q Consensus 55 ~~~~~le~~la~~~g~-~--~~l~~-~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~---------------------- 107 (339)
...++.++.++++++. + .++++ +||+.|+.+ ++.++.+||.+++-.....+.+
T Consensus 48 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~g~ 127 (360)
T PRK05355 48 AVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEVNVAASSEDDGF 127 (360)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEecccccCC
Confidence 5678899999999995 3 35544 677888975 5669999988776543211111
Q ss_pred -------H-HHH-------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccccCC
Q 019543 108 -------R-LLS-------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHS 159 (339)
Q Consensus 108 -------~-~~~-------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g~~ 159 (339)
. .++ ..|.++ ||++++||.+++.|... +.-+ .|++++|.+|++|.+|
T Consensus 128 ~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~~i~~i---~g~l~vVDavss~g~~~idv~~--~d~~~~ssqK~lgP~G 202 (360)
T PRK05355 128 TYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHELPDT---GDVPLVADMSSDILSRPIDVSK--FGLIYAGAQKNIGPAG 202 (360)
T ss_pred CCCCChhhccCCCCCCEEEEccCCCcceEecCccccc---CCCcEEEEcCccccCccCCHHH--ccEEEEeccccccCCc
Confidence 0 010 256555 89999999999888642 2222 3699999999997443
Q ss_pred CceEEEEEEcChhHHHHHHH-H----------HHhcCCCCChHHHH-HHHhchh------hHHHHHHHHHHHHHHHHHHH
Q 019543 160 DVMAGVLAVKGERLAKELYF-L----------QNAEGSGLAPFDCW-ICLRGVK------TMALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 160 ~~~gG~v~~~~~~l~~~l~~-~----------~~~~~~~~~~~~a~-~~~~~l~------~~~~r~~~~~~~a~~l~~~L 221 (339)
.|+++.++ ++.+++.. . ........++.... .+..+|+ .++.+.++.++.++++.++|
T Consensus 203 ---lg~l~~s~-~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l 278 (360)
T PRK05355 203 ---LTIVIVRE-DLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAI 278 (360)
T ss_pred ---eEEEEECH-HHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 46777775 45444332 1 00111222333222 2222222 24566777778899999999
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCH
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 301 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~ 301 (339)
++++.+.. +. .+.+ + ...+++|.+++.....++.+.+...|+.+..| |.
T Consensus 279 ~~~~~~~~--~~----~~~~-------r-s~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~-------------~~---- 327 (360)
T PRK05355 279 DSSDFYRN--PV----APED-------R-SRMNVPFTLADEELDKKFLAEAKAAGLVGLKG-------------HR---- 327 (360)
T ss_pred HhCCCccc--CC----Chhh-------c-CCcEEEEEcCChHHHHHHHHHHHHCCCcccCC-------------CC----
Confidence 98863211 11 0100 1 23679998866533344544444444432211 10
Q ss_pred HHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 302 EVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 302 ~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+.+|+|++..++.+.|+.|.++|++
T Consensus 328 --------~~g~vRiS~~~~nt~eei~~l~~~l~~ 354 (360)
T PRK05355 328 --------SVGGMRASIYNAMPLEGVQALVDFMKE 354 (360)
T ss_pred --------ccCcEEEECCCCCCHHHHHHHHHHHHH
Confidence 136799999999999989999998875
No 274
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.30 E-value=1.9e-10 Score=111.69 Aligned_cols=164 Identities=15% Similarity=0.167 Sum_probs=101.1
Q ss_pred CCchHHHHHHHHHhHhC-CCeEEEcCcHHHHHHHHHH---hcCCCCEEEEcCCCccchH---------------------
Q 019543 53 GNPTRDALESLLAKLDK-ADRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTD--------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g-~~~~l~~~sG~~A~~~il~---ll~~GD~Vi~~~~~y~~~~--------------------- 107 (339)
.++...+|.++|+++.+ .+.+++++||++|+.+.+. .....++|++..+.|+|..
T Consensus 86 ~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~ 165 (423)
T TIGR00713 86 PTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPG 165 (423)
T ss_pred CCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCC
Confidence 34557788889988775 3578899999999975333 2334577777665555421
Q ss_pred ---------------------HHHH----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC
Q 019543 108 ---------------------RLLS----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR 138 (339)
Q Consensus 108 ---------------------~~~~----------------------------~~I~~la~~~g~~livD~a~a~g~~~~ 138 (339)
..+. ++|.++|++||+++|+||+|.....+.
T Consensus 166 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~ 245 (423)
T TIGR00713 166 VPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL 245 (423)
T ss_pred CCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc
Confidence 0110 899999999999999999984211111
Q ss_pred -----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH---HhcCCCCChHHHHHHHhchhhHHH--HHH
Q 019543 139 -----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTMAL--RVE 208 (339)
Q Consensus 139 -----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~---~~~~~~~~~~~a~~~~~~l~~~~~--r~~ 208 (339)
......|++ +|+|.+++ | ..+|++++++ ++.+.+.... ...+...+|..++.++..|+.+.. ..+
T Consensus 246 ~~~~~~~~~~pDi~--t~sK~l~~-G-~pig~v~~~~-~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~ 320 (423)
T TIGR00713 246 GGAQEYFGVEPDLT--TLGKIIGG-G-LPVGAFGGRR-EIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYT 320 (423)
T ss_pred chhHHHhCCCcchh--hhhhhhcC-C-CceeeeeEHH-HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHH
Confidence 112234644 79999983 4 4567888774 6777665311 112346678777776666665432 233
Q ss_pred HHHHHHHHHHHHH
Q 019543 209 KQQDNAQKIAEFL 221 (339)
Q Consensus 209 ~~~~~a~~l~~~L 221 (339)
+.++..+++.+.|
T Consensus 321 ~~~~~~~~~~~~l 333 (423)
T TIGR00713 321 ELDELAKRLAEGL 333 (423)
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444443
No 275
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.29 E-value=5.6e-11 Score=112.73 Aligned_cols=238 Identities=17% Similarity=0.150 Sum_probs=137.2
Q ss_pred chHHHHHHHHHhHhCCC---eEEEcCc-HHHHHHHH-HHhcC---CCCEEEEcCCCc---------c-------------
Q 019543 55 PTRDALESLLAKLDKAD---RALCFTS-GMAALAAV-THLLG---TGEEIVAGDDLY---------G------------- 104 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~~s-G~~A~~~i-l~ll~---~GD~Vi~~~~~y---------~------------- 104 (339)
...++.++.++++++++ .++++++ ||.|+.++ ..+++ +||+|++..... +
T Consensus 44 ~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g~~~~~~~~~a~~~g~~~~~~~~~~~g~ 123 (355)
T cd00611 44 AIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGK 123 (355)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHhcCCCcEEEecccccC
Confidence 45788899999999962 3556555 89999864 45766 677776532111 0
Q ss_pred --chHHHHH--------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccccCCCc
Q 019543 105 --GTDRLLS--------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDV 161 (339)
Q Consensus 105 --~~~~~~~--------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g~~~~ 161 (339)
....... -.+.++++.||++++||.+++.|... +.-++ |+++.|.+|++|.+|
T Consensus 124 ~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~~i~~~~g~~~~VDa~qs~g~~~idv~~~--~~~~ss~~K~lGP~G-- 199 (355)
T cd00611 124 YTKIPDVETWDLAPDAAYVHYCSNETIHGVEFDEVPDTGGVPLVADMSSNILSRPIDVSKF--GVIYAGAQKNLGPAG-- 199 (355)
T ss_pred CCCCCCHhhcCCCCCCCEEEEeCCcccccEEcceecccCCCeEEEEccccccCCCCCHHHh--CEEEeecccccCCCc--
Confidence 0000010 22446777899999999999988652 22223 466676899997443
Q ss_pred eEEEEEEcChhHHHHHHHH-------H---H-hcCCCCChHHHH-HHHhchhh------HHHHHHHHHHHHHHHHHHHhC
Q 019543 162 MAGVLAVKGERLAKELYFL-------Q---N-AEGSGLAPFDCW-ICLRGVKT------MALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~~-------~---~-~~~~~~~~~~a~-~~~~~l~~------~~~r~~~~~~~a~~l~~~L~~ 223 (339)
.|+++.++ ++.+++... . . ......++.... .+..+|+. ++.+.++.++.++++.++|++
T Consensus 200 -~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~ 277 (355)
T cd00611 200 -VTVVIVRK-DLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDN 277 (355)
T ss_pred -eEEEEECH-HHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 46777765 455443321 1 0 011223333222 22223332 445566667888999999999
Q ss_pred CCCceEEecCCCCCCCchHhHhhhcCCCc-ceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHH
Q 019543 224 HPRVKKVNYAGLPEHPGHELHYSQAKGAG-SVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 302 (339)
Q Consensus 224 ~~~i~~v~~p~~~~~~~~~~~~~~~~~~~-~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~ 302 (339)
+|++ |.... .+. ..+ .+++|.+++.....++.+. .++-|.. ....|.
T Consensus 278 ~~gl----~~~~~-~~~---------~rs~~vvsf~~~~~~l~~~~~~~------~~r~G~~-------~~~~~~----- 325 (355)
T cd00611 278 SNGF----YRGPV-DKR---------ARSRMNVPFRLGKEELEKEFLKE------AEAAGMI-------GLKGHR----- 325 (355)
T ss_pred Cccc----cccCC-CHH---------HcCceEEEEEcCChhhhHHHHHH------HHHCCCc-------ccCCCc-----
Confidence 8764 21111 110 123 5699998664111222222 2233321 111121
Q ss_pred HHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 303 VRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 303 ~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
..+.+|+|++..++++.|+.|.++|+++
T Consensus 326 -------~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 326 -------SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred -------ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 1368999999999999999999999864
No 276
>PRK02769 histidine decarboxylase; Provisional
Probab=99.28 E-value=1.4e-09 Score=103.86 Aligned_cols=174 Identities=18% Similarity=0.214 Sum_probs=111.0
Q ss_pred hHHHHHHHHHhHhCCC--e--EEEcCcHHHHHHH-HHH--hcCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 56 TRDALESLLAKLDKAD--R--ALCFTSGMAALAA-VTH--LLGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~--~--~l~~~sG~~A~~~-il~--ll~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
.-++..+.+++++|.+ + ..++++|+++|.. +.. -..++++|++++..+.......+
T Consensus 66 ~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~i 145 (380)
T PRK02769 66 FERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEI 145 (380)
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCCCCcC
Confidence 4445666778999864 3 3667777999863 332 24688999998765544432211
Q ss_pred ----------------------------------HHHHHHHHHcC---CEEEEeCCcCCCCCc---C--cc--cCCCeEE
Q 019543 112 ----------------------------------RKIAEMAHAHG---ALLLVDNSIMSPVLS---R--PL--ELGADIV 147 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g---~~livD~a~a~g~~~---~--~~--~~~~Di~ 147 (339)
++|.++|++|| +++.+|.|++.+... . ++ ..++|.+
T Consensus 146 d~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsi 225 (380)
T PRK02769 146 DYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSI 225 (380)
T ss_pred cHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEE
Confidence 99999999998 699999999876542 1 12 2278999
Q ss_pred EeccccccccCCCceEEEEEEcChhHHHHHHHHHHh--------cCCCC--ChHHHHHHHhc--hhhHHHHHHHHHHHHH
Q 019543 148 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------EGSGL--APFDCWICLRG--VKTMALRVEKQQDNAQ 215 (339)
Q Consensus 148 ~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--------~~~~~--~~~~a~~~~~~--l~~~~~r~~~~~~~a~ 215 (339)
+.|.+|++++|-+ .|+++.++ +..+.+.....+ .|+.. ..+..|.++.. .+.+.+..++..++++
T Consensus 226 s~s~HK~~~~P~g--~G~l~~r~-~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~ 302 (380)
T PRK02769 226 AISGHKFIGSPMP--CGIVLAKK-KYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQ 302 (380)
T ss_pred EECCcccCCCCCC--cEEEEEeh-hhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Confidence 9999999986643 46777775 344433211111 12221 12233333332 3345677788889999
Q ss_pred HHHHHHhCCCCceEEecC
Q 019543 216 KIAEFLASHPRVKKVNYA 233 (339)
Q Consensus 216 ~l~~~L~~~~~i~~v~~p 233 (339)
++.+.|+.. ++..+..|
T Consensus 303 ~l~~~L~~~-g~~~~~~p 319 (380)
T PRK02769 303 YAVDRLQAN-GIPAWRNP 319 (380)
T ss_pred HHHHHHHhC-CCEEEcCC
Confidence 999999874 56555544
No 277
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.27 E-value=3.3e-10 Score=111.84 Aligned_cols=148 Identities=14% Similarity=0.113 Sum_probs=91.1
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-----
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----- 180 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~----- 180 (339)
++|.++|++||+++|+||++ +.|-.+.. .....|| .+++|.+++..-.+|+ +++++ ++.+.+...
T Consensus 284 ~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDi--vtlgK~lggG~~PigA-v~~~~-~i~d~~~~~~~~~~ 359 (504)
T PLN02760 284 EKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDL--VSLAKALSSAYMPIGA-VLVSP-EISDVIHSQSNKLG 359 (504)
T ss_pred HHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcE--EEecccccCCccccce-EeecH-HHHhhhhccccccc
Confidence 99999999999999999999 56544322 1223586 4579999853112444 55654 677766431
Q ss_pred --HHhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEE
Q 019543 181 --QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 256 (339)
Q Consensus 181 --~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs 256 (339)
...++..-+|..+++++..|+.+.+ ..++.++..+++.+.|+.+.. +|... ..+|.|.++.
T Consensus 360 ~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~-----~~~v~----------~vrG~Gl~~g 424 (504)
T PLN02760 360 SFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSG-----SPIIG----------EIRGTGLILG 424 (504)
T ss_pred CcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-----CCCee----------eEEeCceEEE
Confidence 1122345578888888877776643 356666777777777765411 22110 0256788888
Q ss_pred EeeCCH-----------HHHHHHHccCCcceee
Q 019543 257 FLTGSL-----------ALSKHVVETTKYFSIT 278 (339)
Q Consensus 257 ~~~~~~-----------~~~~~~~~~L~~~~i~ 278 (339)
|.+.+. +.+..+.+.+...|+.
T Consensus 425 ie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl 457 (504)
T PLN02760 425 TEFVDNKSPNDPFPAEWGVGAYFGAECKKRGML 457 (504)
T ss_pred EEEecCCcccccccchhHHHHHHHHHHHhCCcE
Confidence 877321 1244566666665654
No 278
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.27 E-value=6.7e-10 Score=108.38 Aligned_cols=174 Identities=11% Similarity=0.158 Sum_probs=109.0
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|+||++ +.|-.+.. .....|++ +++|.+++. ..+|++++++ ++.+.+......++
T Consensus 231 ~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~--t~gK~l~~G--~p~gav~~~~-~i~~~~~~~~~~~T 305 (445)
T PRK08593 231 EALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLM--SFGKSLAGG--MPMSAIVGRK-EIMESLEAPAHLFT 305 (445)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEe--eecccccCC--cccEEEEEcH-HHHhhhccCCCCCC
Confidence 89999999999999999998 44432221 12234755 689999852 4467777764 67666642222346
Q ss_pred CCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee
Q 019543 186 SGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 259 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~ 259 (339)
...+|..++.++..|+.+. ...++.++..+++.+.|++ ++.|..| +|.|.++.+.+
T Consensus 306 ~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v------------------rG~Gl~~gi~l 367 (445)
T PRK08593 306 TGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDV------------------RGYGLSIGIDI 367 (445)
T ss_pred CCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEE------------------eccceEEEEEE
Confidence 6778888777777776653 2345555666667666654 3333222 34666777765
Q ss_pred C--------CHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHH
Q 019543 260 G--------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 331 (339)
Q Consensus 260 ~--------~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~ 331 (339)
. +...+..+.+.+...|+.+. + ...+.+|+++.+.++++.|+.+.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~----------~-----------------~~~~~lr~~p~l~~t~~~id~~~ 420 (445)
T PRK08593 368 VSDKKLKTRDNEAALKICNYCFEHGVVII----------A-----------------VAGNVLRFQPPLVITYEQLDTAL 420 (445)
T ss_pred ecCCCcCCCcHHHHHHHHHHHHHCCeEEe----------c-----------------cCCCEEEEECCCccCHHHHHHHH
Confidence 2 22345667777766665432 1 01257899998877777776666
Q ss_pred HHHh
Q 019543 332 KALR 335 (339)
Q Consensus 332 ~al~ 335 (339)
++++
T Consensus 421 ~~l~ 424 (445)
T PRK08593 421 NTIE 424 (445)
T ss_pred HHHH
Confidence 6654
No 279
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.27 E-value=1.9e-10 Score=111.59 Aligned_cols=177 Identities=15% Similarity=0.157 Sum_probs=111.1
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCC--CcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHH-----
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPV--LSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF----- 179 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~--~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~----- 179 (339)
++|.++|++||+++|+||+| +|. .+.. .....||++ ++|.++| |-...+.++.++ ++.+.+..
T Consensus 231 ~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~g-G~~p~~a~~~~~-~i~~~~~~~~~~~ 305 (429)
T PRK06173 231 VKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKALTG-GYLTLSATITTE-AIAQTICSGEAKC 305 (429)
T ss_pred HHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhhhC-CccccceEEecH-HHHHHHhcCCCCc
Confidence 89999999999999999999 553 1222 122457776 8999974 212345565654 56666542
Q ss_pred HHHhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEE
Q 019543 180 LQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 257 (339)
Q Consensus 180 ~~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~ 257 (339)
+....+...+|..++.++..|+.+.+ ..++.+++.+++.+.|+...+ +|.+. ..++.|.++++
T Consensus 306 ~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~-----~~~v~----------~vRg~Gl~~~i 370 (429)
T PRK06173 306 FMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAAE-----FDSVA----------EVRVLGAIGVV 370 (429)
T ss_pred cccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-----CCCee----------eeeccceEEEE
Confidence 11111345678888888777776642 356666777788887764311 22110 02457889999
Q ss_pred eeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe----ccCCHHHHHHHHHHH
Q 019543 258 LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKA 333 (339)
Q Consensus 258 ~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv----g~e~~~~li~~l~~a 333 (339)
++++...+.++.+.|.+.|+.+...+ +.|||.. +.++.+..++.|.++
T Consensus 371 el~~~~~~~~i~~~l~e~Gi~v~~~g----------------------------~~l~~~Ppl~it~~ei~~~~~~l~~~ 422 (429)
T PRK06173 371 EMKEPVNMATLQPRFVEHGIWVRPFG----------------------------KLVYIMPPFIISPDELSQLTSGLLRV 422 (429)
T ss_pred EeCCcccHHHHHHHHHHCCeEEEecC----------------------------CEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 99765455677888877777654221 3455554 445666667777777
Q ss_pred Hhc
Q 019543 334 LRT 336 (339)
Q Consensus 334 l~~ 336 (339)
|++
T Consensus 423 l~~ 425 (429)
T PRK06173 423 LKQ 425 (429)
T ss_pred HHH
Confidence 654
No 280
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.27 E-value=2.3e-10 Score=110.98 Aligned_cols=149 Identities=11% Similarity=0.097 Sum_probs=93.4
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCC--CcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH---
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPV--LSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--- 181 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~--~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~--- 181 (339)
++|.++|++||+++|+||+| +|. .+.. .....||++ ++|.++|. -...|.+++++ ++.+.+....
T Consensus 229 ~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~gG-~~p~~av~~~~-~i~~~~~~~~~~~ 303 (428)
T PRK07986 229 KRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGIAPDILC--LGKALTGG-TMTLSATLTTR-EVAETISNGEAGC 303 (428)
T ss_pred HHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCCCCCEEE--echhhhCC-cccCcchhchH-HHHHHhhcCCCCc
Confidence 89999999999999999998 443 2222 122347774 89999742 12345555554 6777665311
Q ss_pred --HhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEE
Q 019543 182 --NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 257 (339)
Q Consensus 182 --~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~ 257 (339)
...+...+|..++.++..|+.+++ ..++.+++.+++.+.|+.+.. +|.+. ..+|.|.++++
T Consensus 304 ~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~-----~~~i~----------~vRg~Gl~~~v 368 (428)
T PRK07986 304 FMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLRD-----APMVA----------DVRVLGAIGVV 368 (428)
T ss_pred cccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-----CCCEE----------eEeccceEEEE
Confidence 112345578888777777776542 356666777777777765311 22110 12467889999
Q ss_pred eeCCHHHHHHHHccCCcceeecc
Q 019543 258 LTGSLALSKHVVETTKYFSITVS 280 (339)
Q Consensus 258 ~~~~~~~~~~~~~~L~~~~i~v~ 280 (339)
++.++..+..+.+.+.+.|+.+.
T Consensus 369 e~~~~~~~~~~~~~l~~~Gl~~~ 391 (428)
T PRK07986 369 ETTRPVNMAALQRFFVEQGVWIR 391 (428)
T ss_pred EeCCcccHHHHHHHHHHCCcEEE
Confidence 88654445677777777676543
No 281
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.27 E-value=1e-11 Score=114.82 Aligned_cols=120 Identities=29% Similarity=0.398 Sum_probs=44.7
Q ss_pred HHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCC---CccchHHHHH----------------------
Q 019543 57 RDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDD---LYGGTDRLLS---------------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~---~y~~~~~~~~---------------------- 111 (339)
...+++.++.+.|+|+++++++..+|+..++.-+.+|-+||++.- .+++.+++.+
T Consensus 49 ~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN~t~~~D 128 (367)
T PF03841_consen 49 YAHVEELLCELTGAEAALVVNNNAAAVLLALNTLAKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTNRTHLSD 128 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 346888999999999999999999999877765567778888753 3444332111
Q ss_pred -------------------------------HHHHHHHHHcCCEEEEeCCcCC-------CCC-----cCcccCCCeEEE
Q 019543 112 -------------------------------RKIAEMAHAHGALLLVDNSIMS-------PVL-----SRPLELGADIVM 148 (339)
Q Consensus 112 -------------------------------~~I~~la~~~g~~livD~a~a~-------g~~-----~~~~~~~~Di~~ 148 (339)
++++++|++||+++|+|...+. |.. ...+..|+|+++
T Consensus 129 ye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~ 208 (367)
T PF03841_consen 129 YEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVT 208 (367)
T ss_dssp --------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEE
T ss_pred ccccccccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEE
Confidence 9999999999999999987531 111 123567999999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHH
Q 019543 149 HSATKFIAGHSDVMAGVLAVKGERLAKELYFL 180 (339)
Q Consensus 149 ~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~ 180 (339)
+|..|.+||| ++|+|++++ +++++++.-
T Consensus 209 fSGdKlLGGP---QaGiI~Gkk-~lI~~lk~~ 236 (367)
T PF03841_consen 209 FSGDKLLGGP---QAGIIVGKK-ELIEKLKKH 236 (367)
T ss_dssp EETTSSSSS----S-EEEEEEH-HHHHHHHHH
T ss_pred EECCCcCCCC---CeEEEEeCH-HHHHHHhhC
Confidence 9999999986 479999875 799988753
No 282
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=3.2e-11 Score=110.72 Aligned_cols=243 Identities=14% Similarity=0.169 Sum_probs=154.0
Q ss_pred chHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH----------------------
Q 019543 55 PTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS---------------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~---------------------- 111 (339)
..|-.||+++|++.|+|++++.+-|.+++.. +-++.+.||.|+++.-...+...-++
T Consensus 139 DvHldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhndm~~lerll~ 218 (467)
T KOG1358|consen 139 DVHLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHNDMEDLERLLP 218 (467)
T ss_pred eeecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCCCHHHHHHhcc
Confidence 5678999999999999999999999999985 55689999999987654333221110
Q ss_pred ----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---cc------c-CCCeEE
Q 019543 112 ----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---PL------E-LGADIV 147 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~~------~-~~~Di~ 147 (339)
++|+++..||...|++|+++++|+.++ .+ + ..+|++
T Consensus 219 E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv 298 (467)
T KOG1358|consen 219 EQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIV 298 (467)
T ss_pred CcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeee
Confidence 999999999999999999999887643 21 1 245899
Q ss_pred EeccccccccCCCceEEEEEEcChhH--HHHHHHHHHhcCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHh
Q 019543 148 MHSATKFIAGHSDVMAGVLAVKGERL--AKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 148 ~~S~sK~l~g~~~~~gG~v~~~~~~l--~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L~ 222 (339)
++|+.-+++. .||+.+++. -+ .+++......++..++|..+..+...+..+ +++.+.+++....+-..|+
T Consensus 299 ~~sm~~alas----~GgFc~G~~-~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~ 373 (467)
T KOG1358|consen 299 TASMETALAS----GGGFCAGKS-FIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALS 373 (467)
T ss_pred eecccccccc----cCceeecce-eeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhh
Confidence 9999999983 477887743 22 233443444567888998776666555443 3445555555555555555
Q ss_pred CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC----HHHH----HHHHccCCcceeecccCCcccceeccccc
Q 019543 223 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS----LALS----KHVVETTKYFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 223 ~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~----~~~~----~~~~~~L~~~~i~v~~G~~~s~~~~p~~~ 294 (339)
...++....-| .++++-+.+.. .++- .++++..-..++.+. .....
T Consensus 374 ~~s~~~v~~~~-----------------~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~---------~a~~~ 427 (467)
T KOG1358|consen 374 SNSGFIVSGSP-----------------ESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLT---------RAKYL 427 (467)
T ss_pred cCCceEEecCc-----------------CCceeeeeecccccchHHHHHHHHHHHHHHHhhcceeh---------hhhhh
Confidence 54433322222 45666665532 2222 223333211122211 11000
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+..+...+ +..|||++...++++.++.+.+.+++
T Consensus 428 -------~~~e~~~~-~pSiri~~~a~~seeel~ra~~~ik~ 461 (467)
T KOG1358|consen 428 -------EKLERCPI-PPSIRICVSAGMSEEELERAAELIKE 461 (467)
T ss_pred -------hhcccCCC-CCcEEEEEeCCCCHHHHHHHHHHHHH
Confidence 11112222 24589999999999988888887764
No 283
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.26 E-value=3e-10 Score=107.95 Aligned_cols=241 Identities=10% Similarity=0.068 Sum_probs=137.4
Q ss_pred chHHHHHHHHHhHhCCC---eEEEc-CcHHHHHHHH-HHhcCCCCEEEEcCCCccchH-------------HHHH-----
Q 019543 55 PTRDALESLLAKLDKAD---RALCF-TSGMAALAAV-THLLGTGEEIVAGDDLYGGTD-------------RLLS----- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~-~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~-------------~~~~----- 111 (339)
...++.++.++++++.+ .++++ .||+.++.++ ..++.+...++ ..-.|+... ..+.
T Consensus 41 ~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~~~l~i-~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 119 (361)
T TIGR01366 41 NLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEKKSLHL-SFGEFSSKFAKAVKLAPWLGEPIIVTADPGS 119 (361)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccccccEE-ecCHHHHHHHHHHHhhhccCCceEEecCCCC
Confidence 56788899999999973 34554 5589999854 45653322222 122121000 0000
Q ss_pred -------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEE
Q 019543 112 -------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVL 166 (339)
Q Consensus 112 -------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v 166 (339)
.-|.+++|++|+++++|.+++.|...-... .+|++++|.+|+++++++ .+++
T Consensus 120 ~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I~~~~g~~~iVDavqs~g~~~idv~-~~D~~~~s~~K~lg~~~G--l~~~ 196 (361)
T TIGR01366 120 APEPQADPGVDVIAWAHNETSTGVAVPVRRPEGSDDALVVIDATSGAGGLPVDIA-ETDVYYFAPQKNFASDGG--LWLA 196 (361)
T ss_pred CCCCccCCCCCEEEEcccCCccceecccccccccCCCeEEEEcCccccCCCCCHH-HCCEEEEEchhhcCCCCc--eEEE
Confidence 223445799999999999999886532222 379999999999998753 3455
Q ss_pred EEcChhHHHHHHHH----------HHh-------c--C-CCCChHHHH-HHHhchhh------HHHHHHHHHHHHHHHHH
Q 019543 167 AVKGERLAKELYFL----------QNA-------E--G-SGLAPFDCW-ICLRGVKT------MALRVEKQQDNAQKIAE 219 (339)
Q Consensus 167 ~~~~~~l~~~l~~~----------~~~-------~--~-~~~~~~~a~-~~~~~l~~------~~~r~~~~~~~a~~l~~ 219 (339)
+.++ ++.+++... ... . + ...++.... .+..+++. ++.+.++..+.++++.+
T Consensus 197 ~~s~-~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~ 275 (361)
T TIGR01366 197 IMSP-AALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYS 275 (361)
T ss_pred EECH-HHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 5554 455544321 100 0 1 122222211 11222222 34456777788889999
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 299 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~ 299 (339)
++++.+.++.+. +. +.+ .....++++|. .+ .....+.+.|+..||.+..|. ..
T Consensus 276 ~l~~~~~~~~~~-~~----~~~------~s~~v~~v~~~-~g-~~~~~v~~~L~~~gI~i~~~~------~~-------- 328 (361)
T TIGR01366 276 WAQERPYATPFV-TD----PGK------RSQVVGTIDFV-DD-IDAATVAKILRANGIVDTEPY------RK-------- 328 (361)
T ss_pred HHHhCCCcccCC-CC----hhh------cccceEEEECC-Cc-cCHHHHHHHHHHCCCeeccCc------cc--------
Confidence 999887543211 11 000 00112455552 33 344567777766677653211 00
Q ss_pred CHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 300 PVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 300 ~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+....+|+|++..++++.|+.|.+||+.
T Consensus 329 ---------l~~~~vRis~~~~~t~~di~~l~~al~~ 356 (361)
T TIGR01366 329 ---------LGRNQLRVAMFPAIDPDDVEALTECVDW 356 (361)
T ss_pred ---------cCCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence 1235799999998888888888888874
No 284
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.25 E-value=1.7e-09 Score=104.90 Aligned_cols=146 Identities=12% Similarity=0.177 Sum_probs=83.5
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|+||++. .+..+. ......|++ +++|.+++ | ...|++++++ ++.+.+.......+
T Consensus 221 ~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~--~lsK~l~~-G-~pig~v~~~~-~i~~~~~~~~~~~T 295 (420)
T TIGR00700 221 PALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLI--TTAKSLAD-G-LPLSGVTGRA-EIMDAPAPGGLGGT 295 (420)
T ss_pred HHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEE--EeeccccC-C-cceEEEEecH-HHHhhcCCCCcCCC
Confidence 899999999999999999984 322221 112235754 48999994 4 4456777764 66665543222234
Q ss_pred CCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHh----CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee
Q 019543 186 SGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 259 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~----~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~ 259 (339)
...+|+.+++++..|+.+. ...++..+..+++.+.|+ .+|.+..+ ++.|.++++.+
T Consensus 296 ~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v------------------rg~G~~~~i~~ 357 (420)
T TIGR00700 296 YAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDV------------------RGLGAMIAVEL 357 (420)
T ss_pred CCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEe------------------eccceEEEEEE
Confidence 5567777766655554431 112222333334444443 33333222 34577888876
Q ss_pred C-------CHHHHHHHHccCCcceeecc
Q 019543 260 G-------SLALSKHVVETTKYFSITVS 280 (339)
Q Consensus 260 ~-------~~~~~~~~~~~L~~~~i~v~ 280 (339)
. +.+.+.++.+.+...|+.+.
T Consensus 358 ~~~~~~~~~~~~~~~l~~~~~~~Gv~i~ 385 (420)
T TIGR00700 358 VDPGTTEPDAGLAERIATAAHAAGLLLL 385 (420)
T ss_pred ecCCCCCccHHHHHHHHHHHHHCCeEEe
Confidence 2 12335667766666676654
No 285
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.25 E-value=4.7e-10 Score=108.90 Aligned_cols=176 Identities=10% Similarity=0.099 Sum_probs=109.7
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCC--CcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH---
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPV--LSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--- 181 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~--~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~--- 181 (339)
++|.++|++||+.+|+||+| +|. .+.. .....||++ ++|.++| |-...+.++.+ +++.+.+....
T Consensus 232 ~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~g-G~~p~~a~~~~-~~~~~~~~~~~~~~ 306 (427)
T TIGR00508 232 KRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILC--VGKALTG-GYMTLSATVTT-DKVAQTISSGEAGC 306 (427)
T ss_pred HHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEE--echhhhc-CcccceEEEEc-HHHHHHHhcCCCCc
Confidence 89999999999999999998 432 2221 123457776 7999974 22234566665 46766665311
Q ss_pred --HhcCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEE
Q 019543 182 --NAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 257 (339)
Q Consensus 182 --~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~ 257 (339)
...+...+|..++.++..|+.+. ...++.+++.+++.+.|+++.. +|.+.+ .+|.|.+++|
T Consensus 307 ~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~i~~----------vrg~G~~~~i 371 (427)
T TIGR00508 307 FMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLRK-----NPVVKD----------VRVLGAIGVV 371 (427)
T ss_pred cccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-----CCCEEe----------EeccccEEEE
Confidence 11223457887777777676543 2356667778888888876531 221110 2457899999
Q ss_pred eeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 258 LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 258 ~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.+.+...+..+.++|.+.|+.+. + ....+|++.-+-++++.|+.+.++|+
T Consensus 372 ~~~~~~~~~~~~~~l~~~Gv~~~----------~------------------~~~~l~~~ppl~~t~~~id~~~~~l~ 421 (427)
T TIGR00508 372 EMYKPVNVEELQKKFVEQGVWIR----------P------------------FGKLIYVMPPYIITTEQLQKLTAALI 421 (427)
T ss_pred EECCccCHHHHHHHHHHCCeEEE----------e------------------cCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 98654445677777777666543 1 11357888776666665555555554
No 286
>PRK06149 hypothetical protein; Provisional
Probab=99.25 E-value=8.4e-10 Score=117.16 Aligned_cols=146 Identities=14% Similarity=0.176 Sum_probs=93.1
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCc------ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh-
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSRP------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA- 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~~------~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~- 183 (339)
++|.++|++||+++|+||++ |.|-.+.. .....||+ +++|.+|+. .-.|++++++ ++.+.+.....+
T Consensus 768 ~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--t~gK~lg~G--~Pl~av~~~~-~i~~~~~~~~~~~ 842 (972)
T PRK06149 768 QQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAKGMGNG--HPLGAVITRR-EIAEALEAEGYFF 842 (972)
T ss_pred HHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--EecccccCC--eeeEEEEEcH-HHHhhhccCCccc
Confidence 89999999999999999998 55544321 22345887 679999853 3456777764 666665431112
Q ss_pred cCCCCChHHHHHHHhchhhHHHH--HHHHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEE
Q 019543 184 EGSGLAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 257 (339)
Q Consensus 184 ~~~~~~~~~a~~~~~~l~~~~~r--~~~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~ 257 (339)
.+++.+|..+++++..|+.+.+. .++.++..+++.+.|+++ |.|.. .+|.|.++.+
T Consensus 843 sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~------------------vrG~Gl~~gv 904 (972)
T PRK06149 843 SSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGA------------------VHGMGLYLGV 904 (972)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEE------------------EeecceEEEE
Confidence 24567898888888888776422 333344446666666543 22221 2457788888
Q ss_pred ee-CC-------HHHHHHHHccCCcceeecc
Q 019543 258 LT-GS-------LALSKHVVETTKYFSITVS 280 (339)
Q Consensus 258 ~~-~~-------~~~~~~~~~~L~~~~i~v~ 280 (339)
++ .+ .+.+..+.+.+.+.|+.+.
T Consensus 905 el~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~ 935 (972)
T PRK06149 905 ELVRDRQTLEPATEETAAICDRLLELGVIMQ 935 (972)
T ss_pred EEecCcccCCCChHHHHHHHHHHHhCCeEEe
Confidence 76 21 2345677877777777554
No 287
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.25 E-value=4.7e-10 Score=117.55 Aligned_cols=227 Identities=20% Similarity=0.218 Sum_probs=148.1
Q ss_pred hHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHH-HHh-cCC--CCEEEEcCCCccchHHHHH------------------
Q 019543 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAV-THL-LGT--GEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~--~~l~~~sG~~A~~~i-l~l-l~~--GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
...++++.++++.|.+ ++-++.+++++..++ +++ +++ +|+|++++..|+.+...++
T Consensus 122 al~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d 201 (954)
T PRK05367 122 ALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA 201 (954)
T ss_pred HHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC
Confidence 4567788899999976 457778888877643 332 455 4999999999887764432
Q ss_pred -----------------------HHHHHHHHHcCCEEEEeCCc-CCCCCcCcccCCCeEEEeccccc-----cccCCCce
Q 019543 112 -----------------------RKIAEMAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKF-----IAGHSDVM 162 (339)
Q Consensus 112 -----------------------~~I~~la~~~g~~livD~a~-a~g~~~~~~~~~~Di~~~S~sK~-----l~g~~~~~ 162 (339)
++|+++||++|+++++|..+ +.+...++-++|+||+++|.+|+ +|||+
T Consensus 202 ~~~~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP~--- 278 (954)
T PRK05367 202 LDHDDVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGPH--- 278 (954)
T ss_pred CCcccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCCC---
Confidence 89999999999999999977 44455566678999999999999 77664
Q ss_pred EEEEEEcChhHHHHHHHH-------------------------HHhcCCCCChHHH------HHHH-----hchhhHHHH
Q 019543 163 AGVLAVKGERLAKELYFL-------------------------QNAEGSGLAPFDC------WICL-----RGVKTMALR 206 (339)
Q Consensus 163 gG~v~~~~~~l~~~l~~~-------------------------~~~~~~~~~~~~a------~~~~-----~~l~~~~~r 206 (339)
.|++++++ ++.+.+... ++..+ .+.+.. .++. .+=.-+...
T Consensus 279 aGflavr~-~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRreka--TsNict~qaL~a~~a~~y~~~~g~~Gl~~I 355 (954)
T PRK05367 279 AAYFAVRD-AYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKA--TSNICTAQVLLAVMASMYAVYHGPEGLKAI 355 (954)
T ss_pred EEEEEECH-HHHhhCCCCeeeeecccCCCccccccccccccccccccc--ccccchHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 68999885 454443210 00001 111111 1100 000112333
Q ss_pred HHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCccc
Q 019543 207 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKS 286 (339)
Q Consensus 207 ~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s 286 (339)
.++...++.++++.|+. .+++.+ ++. ....+.|.++. .+.++.++|...|+.++.
T Consensus 356 a~~~~~la~~l~~~L~~-~G~~~~-~~~----------------~f~~~~~~~~~--~~~~i~~~l~~~gi~~~~----- 410 (954)
T PRK05367 356 ARRVHRLAAILAAGLRA-LGLEVV-HDS----------------FFDTLTVEVGG--DAAAVLARALAAGINLRR----- 410 (954)
T ss_pred HHHHHHHHHHHHHHHHh-cCcccC-CCC----------------CCCeEEEeCCC--CHHHHHHHHHHCCceecc-----
Confidence 34455677888888866 444321 111 23577777642 345677777766664321
Q ss_pred ceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 287 LISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 287 ~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+.++.||+|+...++++.|+.|.++|.
T Consensus 411 ----------------------~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 411 ----------------------VDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred ----------------------ccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 124679999999999999999999986
No 288
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.24 E-value=6.9e-10 Score=107.49 Aligned_cols=188 Identities=16% Similarity=0.106 Sum_probs=111.4
Q ss_pred HHHHHHHHHc------CCEEEEeCCcCCCCC----c----CcccCCCeEEEeccccccccCCCceEEEEEEcChh-HHHH
Q 019543 112 RKIAEMAHAH------GALLLVDNSIMSPVL----S----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKE 176 (339)
Q Consensus 112 ~~I~~la~~~------g~~livD~a~a~g~~----~----~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~-l~~~ 176 (339)
++|+++|+++ |+++.+|.+++.+.. . +....++|.++.|.+|++.+|-+ .|+++.++++ +.+.
T Consensus 206 ~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~ 283 (431)
T TIGR01788 206 KALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEE 283 (431)
T ss_pred HHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCC--cEEEEEeChHHcchh
Confidence 9999999999 999999999984321 1 11123679999999999855532 4777776643 2222
Q ss_pred HHHHHHhcCCC-----C--C-h----HHHHHHHhc--hhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchH
Q 019543 177 LYFLQNAEGSG-----L--A-P----FDCWICLRG--VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 242 (339)
Q Consensus 177 l~~~~~~~~~~-----~--~-~----~~a~~~~~~--l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~ 242 (339)
+.....+.+.. + + + +..|+.+.. .+.+.+..++..++++++.+.|++.++++.+. |. |
T Consensus 284 ~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~-~~----~--- 355 (431)
T TIGR01788 284 LIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIIS-DG----S--- 355 (431)
T ss_pred heecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEee-CC----C---
Confidence 21111111111 0 0 1 123333332 34467777888899999999999998876553 21 1
Q ss_pred hHhhhcCCCcceEEEeeCC----HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe
Q 019543 243 LHYSQAKGAGSVLSFLTGS----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 318 (339)
Q Consensus 243 ~~~~~~~~~~~ivs~~~~~----~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv 318 (339)
..++++|.+.+ .....++.++|...|+.+.. ...|... . ..-.+|+++
T Consensus 356 --------~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~------~~~p~~~-----~---------~~~~lR~~~ 407 (431)
T TIGR01788 356 --------GIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPA------YTLPKNA-----E---------DIVVMRIVV 407 (431)
T ss_pred --------CceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccC------CCCCCcc-----C---------CeEEEEEEe
Confidence 46899998753 12345677777766654331 1112110 0 123589999
Q ss_pred cc----CCHHHHHHHHHHHHhcC
Q 019543 319 GI----EDVNDLISDLDKALRTG 337 (339)
Q Consensus 319 g~----e~~~~li~~l~~al~~~ 337 (339)
.. +..++++++|.+++..+
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 408 REGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred cCCCCHHHHHHHHHHHHHHHHhh
Confidence 63 44566666666666543
No 289
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.24 E-value=3.7e-10 Score=109.69 Aligned_cols=204 Identities=17% Similarity=0.182 Sum_probs=126.8
Q ss_pred CCchHHHHHHHHHhHh-CCCeEEEcCcHHHHHHHHHHh---cCCCCEEEEcCCCccchH---------------------
Q 019543 53 GNPTRDALESLLAKLD-KADRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTD--------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~-g~~~~l~~~sG~~A~~~il~l---l~~GD~Vi~~~~~y~~~~--------------------- 107 (339)
.++...+|.++|+++. +.+.+++++||++|+...+.+ ...+++|+..+..|+|..
T Consensus 88 ~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~ 167 (426)
T PRK00062 88 PTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPG 167 (426)
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCC
Confidence 3455667777777765 456788999999999754432 334678887776666532
Q ss_pred ---------------------HHHH----------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-c
Q 019543 108 ---------------------RLLS----------------------------RKIAEMAHAHGALLLVDNSIMSPVL-S 137 (339)
Q Consensus 108 ---------------------~~~~----------------------------~~I~~la~~~g~~livD~a~a~g~~-~ 137 (339)
..+. ++|.++|++||+++|+||+|. |.. +
T Consensus 168 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g 246 (426)
T PRK00062 168 VPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVA 246 (426)
T ss_pred CCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccC
Confidence 0110 889999999999999999995 321 1
Q ss_pred C-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH--h-cCCCCChHHHHHHHhchhhHHH--HH
Q 019543 138 R-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--A-EGSGLAPFDCWICLRGVKTMAL--RV 207 (339)
Q Consensus 138 ~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~-~~~~~~~~~a~~~~~~l~~~~~--r~ 207 (339)
. ......|+ .+++|.+++ |. .+|++++++ ++.+.+..... . .+...+|..++.++..|+.+.. ..
T Consensus 247 ~~~~~~~~~~~pDi--~~~gK~l~~-G~-p~ga~~~~~-~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~ 321 (426)
T PRK00062 247 LGGAQGYYGVTPDL--TTLGKIIGG-GL-PVGAFGGRR-EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFY 321 (426)
T ss_pred CccHHHHhCCCcch--HhhhhHhhC-CC-cceeeeEHH-HHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHH
Confidence 1 11122364 578999984 33 345666664 67776642211 2 2346778777777777766543 45
Q ss_pred HHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-------------HHHHHHHHc
Q 019543 208 EKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-------------LALSKHVVE 270 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-------------~~~~~~~~~ 270 (339)
++.+++.+++.+.|++ ++.+..+ ++.|.++.+++.+ ...+.++.+
T Consensus 322 ~~~~~~~~~~~~~l~~~~~~~~~~~~v------------------rg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~ 383 (426)
T PRK00062 322 EELEALTKRLAEGLKEAAKKAGIPLTV------------------NRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFH 383 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCceEE------------------EEecceEEEEEecCCCcchhhhccccHHHHHHHHH
Confidence 5566666666666653 2321111 3467888887742 123467787
Q ss_pred cCCcceeecc
Q 019543 271 TTKYFSITVS 280 (339)
Q Consensus 271 ~L~~~~i~v~ 280 (339)
.|...|+.+.
T Consensus 384 ~l~~~Gv~v~ 393 (426)
T PRK00062 384 AMLDEGVYLA 393 (426)
T ss_pred HHHHCCeEee
Confidence 7777776654
No 290
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.23 E-value=1.1e-09 Score=106.68 Aligned_cols=177 Identities=16% Similarity=0.146 Sum_probs=101.3
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCcc-----cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-----
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----- 180 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~~~-----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~----- 180 (339)
++|.++|++||+++|+||+| +.|-.+... ....||+ +++|.+++..-.+|+ +++++ ++.+.+..-
T Consensus 239 ~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--t~gK~l~gG~~P~ga-v~~~~-~i~~~~~~~~~~~~ 314 (442)
T PRK13360 239 QRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLL--TCAKGLTNGAIPMGA-VFVSS-EIHDAFMQGPEAGI 314 (442)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCcee--eeeeccccCccceEE-EEEcH-HHHHHhhcCCcccc
Confidence 89999999999999999998 555433321 2234766 679999853123455 55553 566655321
Q ss_pred --HHhcCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEE
Q 019543 181 --QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 256 (339)
Q Consensus 181 --~~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs 256 (339)
...++...+|..++.++..|+.+. ...++..++.+++.+.|+.+.. +|.+.+ .+|.|.++.
T Consensus 315 ~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~-----~~~v~~----------vrG~Gl~~~ 379 (442)
T PRK13360 315 EFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRD-----APHVID----------IRNLGLVGA 379 (442)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-----CCCeee----------eeccceEEE
Confidence 112344567888777777777653 2345555666777777764321 111100 134455555
Q ss_pred EeeC-----CHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHH
Q 019543 257 FLTG-----SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 331 (339)
Q Consensus 257 ~~~~-----~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~ 331 (339)
+.+. +...+.++.+.+.+.|+.++. ..+.+||+.-+..+++.|+.+.
T Consensus 380 ~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~----------------------------~~~~lr~~Ppl~~t~~eid~~~ 431 (442)
T PRK13360 380 VELAPRDGKPGKRAYEVFLKCFEKGLMIRY----------------------------TGDILALSPPLIIEEAQIDELF 431 (442)
T ss_pred EEEecCCCCcchhHHHHHHHHHHCCcEEEe----------------------------cCCEEEEeCCCccCHHHHHHHH
Confidence 5441 122345666666666654431 1256899976655555555555
Q ss_pred HHHh
Q 019543 332 KALR 335 (339)
Q Consensus 332 ~al~ 335 (339)
++|+
T Consensus 432 ~~l~ 435 (442)
T PRK13360 432 DILA 435 (442)
T ss_pred HHHH
Confidence 5443
No 291
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.23 E-value=1e-09 Score=102.19 Aligned_cols=223 Identities=17% Similarity=0.161 Sum_probs=128.4
Q ss_pred eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------------------------------
Q 019543 72 RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------- 111 (339)
Q Consensus 72 ~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------- 111 (339)
+.+++++.+.++..++ .++..||+|+++.++|.+....++
T Consensus 126 diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~ 205 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPH 205 (472)
T ss_pred eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCe
Confidence 4555555589998655 489999999999998876543222
Q ss_pred ---------------------HHHHHHHHHcCCEEEEeCCcCCCCCc------------------------CcccC---C
Q 019543 112 ---------------------RKIAEMAHAHGALLLVDNSIMSPVLS------------------------RPLEL---G 143 (339)
Q Consensus 112 ---------------------~~I~~la~~~g~~livD~a~a~g~~~------------------------~~~~~---~ 143 (339)
++|.+||+||++++|+||.+....+. ..+.. |
T Consensus 206 vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdG 285 (472)
T KOG0634|consen 206 VLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDG 285 (472)
T ss_pred EEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccc
Confidence 99999999999999999998542211 01111 2
Q ss_pred CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHH---HHh-c-----hhhHHHHHHHHHHHH
Q 019543 144 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI---CLR-G-----VKTMALRVEKQQDNA 214 (339)
Q Consensus 144 ~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~---~~~-~-----l~~~~~r~~~~~~~a 214 (339)
--|-..||||.++. +.+-||+.+++ -++++..........+.+.+...+ .++ . ++.+...........
T Consensus 286 rVIr~dSFSKiiaP--GlRlG~it~~~-~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rr 362 (472)
T KOG0634|consen 286 RVIRNDSFSKIIAP--GLRLGWITGNS-LFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERR 362 (472)
T ss_pred cEEeccchhhhhcC--cceeEEeecCH-HHHHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23778999999993 36778998876 455655544433322233322221 111 1 122222222222223
Q ss_pred HHHHHHHhC-CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC--------CHHHHHHHHcc-CCcceeecccCCc
Q 019543 215 QKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--------SLALSKHVVET-TKYFSITVSFGSV 284 (339)
Q Consensus 215 ~~l~~~L~~-~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~--------~~~~~~~~~~~-L~~~~i~v~~G~~ 284 (339)
..+...|.. +|.-.+...|. ..|-.+||++. +..+++++... +.+.|+.+-.|..
T Consensus 363 n~~l~Al~kylp~~~~~~~~P---------------~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~ 427 (472)
T KOG0634|consen 363 NALLSALDKYLPKSVCEYHPP---------------KAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSW 427 (472)
T ss_pred HHHHHHHHHhCCCCeeEEecC---------------CcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCce
Confidence 333333332 23322333331 14567788883 44555555443 4567888878876
Q ss_pred ccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHH
Q 019543 285 KSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLIS 328 (339)
Q Consensus 285 ~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~ 328 (339)
+... |-. + .++-.+|+|+...+.+++.+
T Consensus 428 F~v~--p~~------s--------~~kiffRls~a~a~~e~l~~ 455 (472)
T KOG0634|consen 428 FMVD--PES------S--------WSKIFFRLSIAFAEPEKLDE 455 (472)
T ss_pred eEEc--Ccc------C--------CCcceEEEEeecCCHHHHHH
Confidence 5432 211 0 12348999999988876533
No 292
>PRK07678 aminotransferase; Validated
Probab=99.23 E-value=2.5e-09 Score=104.52 Aligned_cols=180 Identities=19% Similarity=0.212 Sum_probs=107.4
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-----
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----- 180 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~----- 180 (339)
+++.++|++||+++|+||++ +.|-.+.. .....||++ ++|.+++.. .-.|.+++++ ++.+.+..-
T Consensus 237 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt--~gK~lggG~-~Pi~av~~~~-~i~~~~~~~~~~~~ 312 (451)
T PRK07678 237 KAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIIT--MAKGITSAY-LPLSATAVKK-EIYEAFKGKGEYEH 312 (451)
T ss_pred HHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEE--eecccccCC-cceeEEEEcH-HHHHHHhccCcccc
Confidence 99999999999999999998 45433221 233458885 599999632 2245566654 566655421
Q ss_pred -HHhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcc
Q 019543 181 -QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGS 253 (339)
Q Consensus 181 -~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ 253 (339)
....+..-+|..++.++..|+.+.+ ..++.++..+++.+.|++ ++.+.. .+|.|.
T Consensus 313 ~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~------------------vrg~Gl 374 (451)
T PRK07678 313 FRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGD------------------IRGKGL 374 (451)
T ss_pred cccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEE------------------EEeece
Confidence 1123456678888888877776643 344555556666666643 332221 245678
Q ss_pred eEEEeeC---------CHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHH
Q 019543 254 VLSFLTG---------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVN 324 (339)
Q Consensus 254 ivs~~~~---------~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~ 324 (339)
++.+++. +...+.++.+.+...|+.+... .|.+ + -..+.|||+.-+.+++
T Consensus 375 ~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~-------g~~v------~--------~~~~~lrl~Ppl~it~ 433 (451)
T PRK07678 375 LVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKN-------GDTV------A--------GYNNVLTLSPPLVISS 433 (451)
T ss_pred EEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeec-------Cccc------c--------CCCCEEEEECCCcCCH
Confidence 8888862 2233567777777777655321 1111 0 0236799987765555
Q ss_pred HHHHHHHHHH
Q 019543 325 DLISDLDKAL 334 (339)
Q Consensus 325 ~li~~l~~al 334 (339)
+.|+.+.++|
T Consensus 434 ~eid~~~~~l 443 (451)
T PRK07678 434 EEIAFIVGTL 443 (451)
T ss_pred HHHHHHHHHH
Confidence 5444444444
No 293
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.22 E-value=9.4e-10 Score=106.67 Aligned_cols=146 Identities=11% Similarity=0.142 Sum_probs=88.9
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|+||++. .|..+.. .....|++ +++|.+++ | ...|++++++ ++.+.+.......+
T Consensus 222 ~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv--~~sK~l~~-G-~pigav~~~~-~i~~~~~~~~~~~T 296 (421)
T PRK06777 222 SALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLI--TMAKSLGG-G-MPISAVVGRA-EVMDAPAPGGLGGT 296 (421)
T ss_pred HHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEE--eeehhhcC-C-CceEEEEEcH-HHHhccCCCCCCCC
Confidence 999999999999999999985 2222221 12235765 68999984 4 4466777764 66665543322234
Q ss_pred CCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEee
Q 019543 186 SGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 259 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~ 259 (339)
...+|..+++++..|+.++ ...++.++..+++.+.|+++ +.+.. .++.|.++.+++
T Consensus 297 ~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrg~G~~~~i~~ 358 (421)
T PRK06777 297 YAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVD------------------IRARGSMVAVEF 358 (421)
T ss_pred CCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEE------------------ecCceEEEEEEE
Confidence 4567887777777776542 34555556667777777653 22211 134677887765
Q ss_pred CCH-------HHHHHHHccCCcceeecc
Q 019543 260 GSL-------ALSKHVVETTKYFSITVS 280 (339)
Q Consensus 260 ~~~-------~~~~~~~~~L~~~~i~v~ 280 (339)
... +.+..+.+.+.+.|+.+.
T Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~Gv~i~ 386 (421)
T PRK06777 359 NDPQTGKPSPEFTRQYQRQALEEGLLLL 386 (421)
T ss_pred ecCccCCccHHHHHHHHHHHHhCCeEEe
Confidence 321 224555555555666654
No 294
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.21 E-value=8.2e-10 Score=107.23 Aligned_cols=180 Identities=14% Similarity=0.160 Sum_probs=100.8
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|+||+|. .|-.+. ......|++ +++|.+++.| ...|++++++ ++ ..+.......+
T Consensus 222 ~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~--t~~K~l~~~G-~pigav~~~~-~i-~~~~~~~~~~T 296 (425)
T PRK09264 222 QRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIV--TLSKSISGYG-LPMALVLIKP-EL-DVWKPGEHNGT 296 (425)
T ss_pred HHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEE--EeccccCCCc-cceEEEEEch-hh-hccCCCccCCC
Confidence 999999999999999999984 222111 122345765 5689998644 4456777764 44 22211111112
Q ss_pred CCCChHHHHHHHhchhh-H--HHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH
Q 019543 186 SGLAPFDCWICLRGVKT-M--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 262 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~-~--~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~ 262 (339)
...+|...+.++..++. + +...++.+++.+++.+.|+.+.. .+|.... ..++.|.++++.+.+.
T Consensus 297 ~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~----~~~~~~~---------~vrg~Gl~~~i~l~~~ 363 (425)
T PRK09264 297 FRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAA----KYPGLGA---------EVRGRGMMQGIDFGDG 363 (425)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH----hCCCcee---------cceecccEEEEEecCh
Confidence 33455555545455522 2 12344555666666666654311 1121100 0145678889999776
Q ss_pred HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 263 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 263 ~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
+.+.++.+.+...|+.+...+ .....||+++.+..+++.|+.+.++|
T Consensus 364 ~~~~~l~~~~~~~Gv~~~~~~-------------------------~~~~~lr~~p~l~~t~~ei~~~~~~l 410 (425)
T PRK09264 364 ELAGKIAAEAFENGLIIETSG-------------------------PEDEVVKLLPPLTIDEEELEEGLDIL 410 (425)
T ss_pred HHHHHHHHHHHHCCCEEeccC-------------------------CCCCEEEEeCCCCCCHHHHHHHHHHH
Confidence 667788888777676543211 12367999977555555444444443
No 295
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.21 E-value=8.4e-10 Score=106.91 Aligned_cols=148 Identities=9% Similarity=0.113 Sum_probs=91.6
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCC--CcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH----
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPV--LSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL---- 180 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~--~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~---- 180 (339)
++|.++|++||+++|+||++ +|+ .+.. .....||+ +++|.++|. -..+|++++++ ++.+.+...
T Consensus 225 ~~lr~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi~--t~gK~l~gG-~~p~~av~~~~-~i~~~~~~~~~~~ 299 (422)
T PRK05630 225 EGVRTLCDKHDILLIADEIA-TGFGRTGELFATLAAGVTPDIM--CVGKALTGG-FMSFAATLCTD-KVAQLISTPNGGG 299 (422)
T ss_pred HHHHHHHHHcCCEEEEecce-eCCCcCchhhHHHhcCCCCCee--eeechhhcC-ccccceeeccH-HHHHHHhccCCCC
Confidence 99999999999999999998 443 2221 12234777 679999752 12356676664 566655421
Q ss_pred --HHhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEE
Q 019543 181 --QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 256 (339)
Q Consensus 181 --~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs 256 (339)
....+...+|..++.+...|+.+.+ ..++.+++.+++.+.|+.+. .+|.+. ..+|.|.++.
T Consensus 300 ~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~-----~~~~v~----------~vRg~Gl~~~ 364 (422)
T PRK05630 300 ALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLA-----HLPGVA----------DVRVLGAIGV 364 (422)
T ss_pred ccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhh-----cCCCee----------eeeccccEEE
Confidence 1122455678888777777766532 34455666677777665421 123211 0256789999
Q ss_pred EeeCCHHHHHHHHccCCcceeec
Q 019543 257 FLTGSLALSKHVVETTKYFSITV 279 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~L~~~~i~v 279 (339)
+++.+...+..+.+.+.+.|+.+
T Consensus 365 ie~~~~~~~~~~~~~~~~~Gl~~ 387 (422)
T PRK05630 365 VEMEQPVDMEEATQAAVDHGVWL 387 (422)
T ss_pred EEECCcccHHHHHHHHHHCCeEE
Confidence 99865433456777776666654
No 296
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.21 E-value=2.6e-09 Score=104.16 Aligned_cols=174 Identities=15% Similarity=0.181 Sum_probs=107.2
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|+||+|. .|..+.. .....|++ +++|.+++ | ...|++++++ ++.+.+......++
T Consensus 228 ~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii--tlsK~l~~-G-~pigav~~~~-~i~~~~~~~~~~~T 302 (443)
T PRK08360 228 KKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII--TLGKPLGG-G-LPISATIGRA-EIMDSLPPLAHAFT 302 (443)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE--EecccccC-C-ceeEEEEEcH-HHHhhhcCCCCCCC
Confidence 899999999999999999985 3332221 12234765 67999994 4 4567777764 67766653322345
Q ss_pred CCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEee
Q 019543 186 SGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 259 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~ 259 (339)
...+|..++.+...|+.+. ...++.+++.+++.+.|+++ +.+.. .++.|.++.+++
T Consensus 303 ~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~------------------vrg~Gl~~gie~ 364 (443)
T PRK08360 303 LSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGD------------------VRGIGLMIGVDL 364 (443)
T ss_pred CCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeee------------------eeccceEEEEEE
Confidence 5667777777766666653 23455555666666666542 22211 245678888876
Q ss_pred C-C-------HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHH
Q 019543 260 G-S-------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 331 (339)
Q Consensus 260 ~-~-------~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~ 331 (339)
. + ...+.++.+.+...|+.+.. ...+.+|++..+..+++.|+.+.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~---------------------------~~~~~lr~~P~l~~t~~~id~~~ 417 (443)
T PRK08360 365 VKDRETKERAYEEAAKVVWRAWELGLIVTF---------------------------FSGNVLRIQPPLTIEKEVLDEGL 417 (443)
T ss_pred ecCCcccCccHHHHHHHHHHHHHCCeEEee---------------------------cCCCEEEEeCCCCCCHHHHHHHH
Confidence 3 2 13355677777666664421 02367899887766666666555
Q ss_pred HHHh
Q 019543 332 KALR 335 (339)
Q Consensus 332 ~al~ 335 (339)
++++
T Consensus 418 ~~l~ 421 (443)
T PRK08360 418 DILE 421 (443)
T ss_pred HHHH
Confidence 5554
No 297
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.21 E-value=5.2e-10 Score=117.26 Aligned_cols=244 Identities=21% Similarity=0.230 Sum_probs=146.7
Q ss_pred hHHHHHHHHHhHhCCCeEEEcCcH-HHHHHH-HHH----hcCCCC----EEEEcCCCccchHHHHH--------------
Q 019543 56 TRDALESLLAKLDKADRALCFTSG-MAALAA-VTH----LLGTGE----EIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~~~l~~~sG-~~A~~~-il~----ll~~GD----~Vi~~~~~y~~~~~~~~-------------- 111 (339)
...++++.+++++|.+.+-+.++| .+|+.+ ++. ..++|| .|++++..++.....+.
T Consensus 543 ~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~ 622 (954)
T PRK05367 543 LIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDEN 622 (954)
T ss_pred HHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCC
Confidence 456888999999999877666655 566632 222 246776 58888776643321111
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCC--CcCcccCCCeEEEeccc
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPV--LSRPLELGADIVMHSAT 152 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~--~~~~~~~~~Di~~~S~s 152 (339)
++|+++||++|+++++|.++..+. +.++...|+|++++|++
T Consensus 623 G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~H 702 (954)
T PRK05367 623 GNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLH 702 (954)
T ss_pred CCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCc
Confidence 899999999999999999996442 23455689999999999
Q ss_pred cccccC---CCceEEEEEEcChhHHHHHHHHH----Hh---cCCCC-ChH-H------HH--HHHhchhhHHHHHHHHHH
Q 019543 153 KFIAGH---SDVMAGVLAVKGERLAKELYFLQ----NA---EGSGL-APF-D------CW--ICLRGVKTMALRVEKQQD 212 (339)
Q Consensus 153 K~l~g~---~~~~gG~v~~~~~~l~~~l~~~~----~~---~~~~~-~~~-~------a~--~~~~~l~~~~~r~~~~~~ 212 (339)
|+|+.| |+.-.|++.+++ .+...+.... .. .|... +++ . +| +...+-+.+.+..++...
T Consensus 703 K~f~~P~G~GGPg~G~l~vr~-~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~ 781 (954)
T PRK05367 703 KTFCIPHGGGGPGVGPIGVKA-HLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAIL 781 (954)
T ss_pred ccCCCCcCCCCCceEEEeecc-cccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 998754 223356777763 4433332111 00 11111 122 0 11 112233445666666668
Q ss_pred HHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEe-eCC--HHHHHHHHccCCcceeecccCCccccee
Q 019543 213 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-TGS--LALSKHVVETTKYFSITVSFGSVKSLIS 289 (339)
Q Consensus 213 ~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~-~~~--~~~~~~~~~~L~~~~i~v~~G~~~s~~~ 289 (339)
++.++++.|+..-. +.|++-..... ...++.+. +.. ...+..+.++|..+|+.... +.
T Consensus 782 ~A~Yl~~~L~~~~~---~~~~~~~~~~~----------~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t------~~ 842 (954)
T PRK05367 782 NANYIAKRLKDHYP---VLYTGANGRVA----------HECILDLRPLKESTGITVDDIAKRLIDYGFHAPT------MS 842 (954)
T ss_pred HHHHHHHHHHhhcC---ccccCCCCCcc----------cceEEEeecccccCCCCHHHHHHHHHHCCCeEee------cC
Confidence 89999999977532 22322110001 23566553 321 12346678888666654321 11
Q ss_pred ccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 290 MPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 290 ~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
.| .++.+||+++..+.++.+++|.++++++
T Consensus 843 ~p------------------v~~~l~i~ptE~~s~~elDr~~~al~~i 872 (954)
T PRK05367 843 FP------------------VAGTLMVEPTESESKAELDRFCDAMIAI 872 (954)
T ss_pred Cc------------------cCCEEEEEeeecCCHHHHHHHHHHHHHH
Confidence 12 2478999999988888899999988653
No 298
>PRK12403 putative aminotransferase; Provisional
Probab=99.20 E-value=1.6e-09 Score=106.21 Aligned_cols=126 Identities=20% Similarity=0.228 Sum_probs=78.6
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH----
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---- 181 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~---- 181 (339)
++|.++|++||+++|+||++. .|-.+.. .....||++ ++|.++|.-..+|+++ ++ +++.+.+....
T Consensus 246 ~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lggG~~Piga~v-~~-~~i~~~~~~~~~~~~ 321 (460)
T PRK12403 246 PEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTSGYVPMGGLV-LS-KRIAEALVEQGGVFA 321 (460)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEE--EcccccccccceEEEE-EC-HHHHHHHhcCCCccc
Confidence 999999999999999999993 3322221 223458886 8999996311345555 55 35666554211
Q ss_pred HhcCCCCChHHHHHHHhchhhHHH--HHHHHH-HHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcce
Q 019543 182 NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQ-DNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 254 (339)
Q Consensus 182 ~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~-~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~i 254 (339)
...+...+|..++.++..|+.+++ ..++.+ ++.+++.+.|++ ++.+..| +|.|.+
T Consensus 322 ~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rG~Gl~ 383 (460)
T PRK12403 322 HGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEV------------------QGAGLV 383 (460)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeE------------------eecceE
Confidence 112345788888888887777643 244553 566667666653 3322222 457788
Q ss_pred EEEee
Q 019543 255 LSFLT 259 (339)
Q Consensus 255 vs~~~ 259 (339)
+.+++
T Consensus 384 ~gie~ 388 (460)
T PRK12403 384 AALQF 388 (460)
T ss_pred EEEEE
Confidence 88876
No 299
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.20 E-value=1.3e-09 Score=105.73 Aligned_cols=180 Identities=12% Similarity=0.133 Sum_probs=106.6
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCcc---cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 187 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~~---~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~ 187 (339)
++|.++|++||+++|+||++. .|..+... ..+...-+.|++|.+++ | ...|++++++ ++.+.+.......+..
T Consensus 222 ~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~-G-~pigav~~~~-~i~~~~~~~~~~~T~~ 298 (425)
T PRK07495 222 KALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLAG-G-FPLAAVTGRA-EIMDAPGPGGLGGTYG 298 (425)
T ss_pred HHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhcC-C-ccceEEEEcH-HHHhccCCCCcCCCCC
Confidence 899999999999999999984 22222221 12222235678999984 3 4567777764 6666554322233456
Q ss_pred CChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC
Q 019543 188 LAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 261 (339)
Q Consensus 188 ~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~ 261 (339)
.+|+.++.++..++.+.. ..++.++..+++.+.|+.+ |.+..| +|.|.++++++.+
T Consensus 299 ~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v------------------rG~Gl~~~iel~~ 360 (425)
T PRK07495 299 GNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIADI------------------RGPGFMNAVEFND 360 (425)
T ss_pred CCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCCCeeee------------------ecCceEEEEEEec
Confidence 678877766666665532 2344445555666655543 322222 3567888888733
Q ss_pred H-------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe----ccCCHHHHHHHH
Q 019543 262 L-------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDL 330 (339)
Q Consensus 262 ~-------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv----g~e~~~~li~~l 330 (339)
. ..+..+.+.+...|+.+...+ ...+.|||.. +.++.++.++.|
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-------------------------~~~~~~r~~Ppl~it~~~id~~~~~l 415 (425)
T PRK07495 361 ADSGLPSAEFANRVRLKALEKGLILLTCG-------------------------VHGNVIRFLAPITIQDDVFAEALDIL 415 (425)
T ss_pred CCCCCccHHHHHHHHHHHHHCCeEEeecC-------------------------CCCCEEEEeCCCccCHHHHHHHHHHH
Confidence 1 224456666666666543100 1236688884 456677777777
Q ss_pred HHHHhcC
Q 019543 331 DKALRTG 337 (339)
Q Consensus 331 ~~al~~~ 337 (339)
.++|+++
T Consensus 416 ~~~l~~~ 422 (425)
T PRK07495 416 EASILEA 422 (425)
T ss_pred HHHHHHH
Confidence 7777653
No 300
>PRK06541 hypothetical protein; Provisional
Probab=99.20 E-value=1.6e-09 Score=106.02 Aligned_cols=180 Identities=13% Similarity=0.119 Sum_probs=107.8
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH---
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--- 182 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--- 182 (339)
++|.++|++||+++|+||++ +.|-.+.. .....|+++ ++|.+++ |....|++++++ ++.+.+.....
T Consensus 245 ~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~~-G~~pigav~~~~-~i~~~~~~~~~~~~ 320 (460)
T PRK06541 245 ERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGITS-GYSPLGAMIASD-RLFEPFLDGPTMFL 320 (460)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--ecccccC-CccceeEEEEcH-HHHHHhhcCCCccc
Confidence 89999999999999999999 56543332 122458764 8999994 221234555554 56555532111
Q ss_pred -hcCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee
Q 019543 183 -AEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 259 (339)
Q Consensus 183 -~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~ 259 (339)
..+...+|..+++++..|+.+. ...++.+++.+++.+.|+++.. +|... ..+|.|.++.+++
T Consensus 321 ~~~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-----~~~v~----------~vrg~Gl~~~ie~ 385 (460)
T PRK06541 321 HGYTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-----LPIVG----------DVRGDGYFYGIEL 385 (460)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-----CCCeE----------EEEecceEEEEEE
Confidence 1245667888887777777653 2356666777888888876421 22100 0245788888886
Q ss_pred C-CH--------HH----H-HHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHH
Q 019543 260 G-SL--------AL----S-KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVND 325 (339)
Q Consensus 260 ~-~~--------~~----~-~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~ 325 (339)
. +. .. . ..+.+.+...|+.++.. + ...+.|||+.-+..+++
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~-----------------~g~~~lrl~Ppl~~t~~ 440 (460)
T PRK06541 386 VKDKATKETFTDDESERLLRGFLSPALFEAGLYCRAD--------D-----------------RGDPVVQLAPPLISGQE 440 (460)
T ss_pred ecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEec--------C-----------------CCCCEEEEECCCCCCHH
Confidence 2 11 00 1 24555665666654310 0 02367999988766666
Q ss_pred HHHHHHHHHh
Q 019543 326 LISDLDKALR 335 (339)
Q Consensus 326 li~~l~~al~ 335 (339)
.|+.+.++|+
T Consensus 441 ~id~~~~~l~ 450 (460)
T PRK06541 441 EFDEIEQILR 450 (460)
T ss_pred HHHHHHHHHH
Confidence 6666655554
No 301
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.20 E-value=1.6e-09 Score=105.06 Aligned_cols=180 Identities=12% Similarity=0.142 Sum_probs=103.0
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCcc-----cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~~-----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|+||++. .|..+... ....|+ .|++|.+++ | ...|++++++ ++.+.+.......+
T Consensus 222 ~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi--~t~gK~l~~-G-~pigav~~~~-~i~~~~~~~~~~~T 296 (421)
T PRK09792 222 AAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDL--MTMAKSLAG-G-MPLSGVVGNA-NIMDAPAPGGLGGT 296 (421)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcE--EEeehhhcC-C-CceEEEEEcH-HHHhccCCCCcCCC
Confidence 899999999999999999974 33323221 123474 678999985 3 4456677764 66665543222234
Q ss_pred CCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-
Q 019543 186 SGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL- 262 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~- 262 (339)
..-+|+.+++++..++.+.. ..++.++..+++.+.|+.+.. .+|... ..+|.|.++++++.+.
T Consensus 297 ~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~----~~p~v~----------~vrG~Gl~~~ie~~~~~ 362 (421)
T PRK09792 297 YAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKE----SVPAIA----------AVRGLGSMIAAEFNDPQ 362 (421)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH----hCCCcc----------eecccceEEEEEecCCc
Confidence 45677777666555554422 233334445555555543210 012110 0246788999988432
Q ss_pred ------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 263 ------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 263 ------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..+.++.+.+...|+.+. +. |...+.|||...+..+++.++.+.++|+
T Consensus 363 ~~~~~~~~~~~l~~~~~~~Gv~i~----------~~---------------g~~~~~irl~P~l~i~~~ei~~~~~~l~ 416 (421)
T PRK09792 363 TGEPSAAIAQKIQQRALAQGLLLL----------TC---------------GAYGNVIRFLYPLTIPDAQFDAAMKILQ 416 (421)
T ss_pred cCCcchHHHHHHHHHHHHCCcEEe----------ec---------------CCCCCEEEEeCCCcCCHHHHHHHHHHHH
Confidence 235567766666666542 10 0123679999777555555555544443
No 302
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.19 E-value=4e-10 Score=116.01 Aligned_cols=245 Identities=18% Similarity=0.192 Sum_probs=137.9
Q ss_pred chHHHHHHHHHhHhCCCeEEEcC-cHHHHHHH-HHHh----cCC----CCEEEEcCCCccchHH----------------
Q 019543 55 PTRDALESLLAKLDKADRALCFT-SGMAALAA-VTHL----LGT----GEEIVAGDDLYGGTDR---------------- 108 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~-sG~~A~~~-il~l----l~~----GD~Vi~~~~~y~~~~~---------------- 108 (339)
....+||+.++++.|.+.+-+.+ ||.+|..+ ++++ ..+ .++|+++...++.+..
T Consensus 543 q~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~ 622 (954)
T PRK12566 543 AMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDP 622 (954)
T ss_pred HHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCC
Confidence 46789999999999999887777 77777743 3332 222 3567777655522211
Q ss_pred -----------HHH------------------------HHHHHHHHHcCCEEEEeCCcCCCC--CcCcccCCCeEEEecc
Q 019543 109 -----------LLS------------------------RKIAEMAHAHGALLLVDNSIMSPV--LSRPLELGADIVMHSA 151 (339)
Q Consensus 109 -----------~~~------------------------~~I~~la~~~g~~livD~a~a~g~--~~~~~~~~~Di~~~S~ 151 (339)
.+. ++|+++||++|+++++|.++..+. ...+.+.|+||+++++
T Consensus 623 ~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~ 702 (954)
T PRK12566 623 DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNL 702 (954)
T ss_pred CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecC
Confidence 110 889999999999999999996433 2345678999999999
Q ss_pred ccccccCCC---ceEEEEEEcChhHHHHHHHHH--Hh------cCCC-CChHHH----HHHHhchhh----HHHHHHHHH
Q 019543 152 TKFIAGHSD---VMAGVLAVKGERLAKELYFLQ--NA------EGSG-LAPFDC----WICLRGVKT----MALRVEKQQ 211 (339)
Q Consensus 152 sK~l~g~~~---~~gG~v~~~~~~l~~~l~~~~--~~------~~~~-~~~~~a----~~~~~~l~~----~~~r~~~~~ 211 (339)
+|+|++|-+ ...|.+.++ +.+...++.+. .. .++. ..+..+ ..+..-+.. +.+..+...
T Consensus 703 HKtf~~P~G~GGP~vG~iav~-~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~eLk~aa~~ai 781 (954)
T PRK12566 703 HKTFCIPHGGGGPGMGPIGVR-AHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQLADASEVAI 781 (954)
T ss_pred CcccCcCccCCCCccchhhhh-hhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHHHHHHHHHHH
Confidence 999986632 223333333 23434444321 00 1111 011111 111111122 221122224
Q ss_pred HHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEe-eCCH--HHHHHHHccCCcceeecccCCcccce
Q 019543 212 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-TGSL--ALSKHVVETTKYFSITVSFGSVKSLI 288 (339)
Q Consensus 212 ~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~-~~~~--~~~~~~~~~L~~~~i~v~~G~~~s~~ 288 (339)
.|+.++++.|+...++. |.+ .++. +- ...++.+. +.+. ..+..+.++|..+|+.... .
T Consensus 782 lnAnYla~rL~~~~~v~---~~~--~~~~-------~~-hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt------~ 842 (954)
T PRK12566 782 LSANYLANQLGGAFPVL---YRG--RNER-------VA-HECILDLRPLKAQTGISEEDVAKRLMDYGFHAPT------M 842 (954)
T ss_pred HHHHHHHHHhHhhCCCC---cCC--CCCC-------ee-eEEEEEccccccccCCCHHHHHHHHHHCCcEEeE------E
Confidence 68888999887643321 211 0000 00 11223322 3211 2235577777666664221 1
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
.+| .++.+||+++..+.++.||+|.++|+++
T Consensus 843 ~fP------------------v~~~LmIepTE~eskeEIDrf~eAL~~I 873 (954)
T PRK12566 843 SFP------------------VPGTLMVEPTESESKAELDRFVEAMLSI 873 (954)
T ss_pred eec------------------cCCEEEEEeeeeCCHHHHHHHHHHHHHH
Confidence 122 2478999999999999999999998753
No 303
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.19 E-value=2.8e-09 Score=104.00 Aligned_cols=177 Identities=16% Similarity=0.168 Sum_probs=103.1
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHH------
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF------ 179 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~------ 179 (339)
++|.++|++||+++|+||++ +.|-.+.. .....|++ +++|.+++.. .-.|.+++++ ++.+.+..
T Consensus 242 ~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~--~~gK~l~gG~-~Pi~av~~~~-~i~~~~~~~~~~~~ 317 (445)
T PRK09221 242 QRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDII--TFAKGLTNGA-IPMGAVIASD-EIYDAFMQGPEYAI 317 (445)
T ss_pred HHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEE--EeccccccCc-ccceeeEEcH-HHHHhhccCccccc
Confidence 99999999999999999998 44432222 12234765 5799998531 2134555653 56665532
Q ss_pred -HHHhcCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEE
Q 019543 180 -LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 256 (339)
Q Consensus 180 -~~~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs 256 (339)
+...++...+|+.++.++..|+.+. ...++.++..+++.+.|+++.. +|.+. ..+|.|.+..
T Consensus 318 ~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~-----~~~v~----------~vrg~Gl~~~ 382 (445)
T PRK09221 318 EFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLKG-----LPHVI----------DIRNIGLVAG 382 (445)
T ss_pred ccccccCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcc-----CCCEE----------EEecCceEEE
Confidence 1112344567887777777776653 2355666777778887776522 22110 0144566666
Q ss_pred EeeCC-----HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHH
Q 019543 257 FLTGS-----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 331 (339)
Q Consensus 257 ~~~~~-----~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~ 331 (339)
+.+.+ ...+.++.+.+.+.|+.++. ..+.|||+.-+..+++.|+.+.
T Consensus 383 v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----------------------------~~~~lr~~Ppl~~t~~eid~~~ 434 (445)
T PRK09221 383 IELAPRPGAPGARGYEAFMKCFEKGLLVRY----------------------------TGDTIALSPPLIIEKAQIDELV 434 (445)
T ss_pred EEEecccccccchHHHHHHHHHHCCeEEee----------------------------cCCEEEEECCccCCHHHHHHHH
Confidence 66532 12345666777666665431 1246899876655555555554
Q ss_pred HHHh
Q 019543 332 KALR 335 (339)
Q Consensus 332 ~al~ 335 (339)
++|+
T Consensus 435 ~~l~ 438 (445)
T PRK09221 435 DALG 438 (445)
T ss_pred HHHH
Confidence 4443
No 304
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.19 E-value=3e-09 Score=103.87 Aligned_cols=176 Identities=14% Similarity=0.163 Sum_probs=103.8
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|.||++. .|-.+.. .....|+++. +|.+++ | ...|++++++ ++.+.+.......+
T Consensus 243 ~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~--gK~l~~-G-~Pi~av~~~~-~i~~~~~~~~~~~T 317 (443)
T PRK06058 243 PALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITT--AKGIAG-G-LPLSAVTGRA-EIMDAPHPGGLGGT 317 (443)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEE--cccccC-C-CccEEEEEcH-HHHhhccCCCCCCC
Confidence 899999999999999999984 3322211 1233487764 799985 3 4456666664 56665543222234
Q ss_pred CCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEee
Q 019543 186 SGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 259 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~ 259 (339)
..-+|+.+++++..|+.+.+ ..++.++..+++.+.|+++ +.+.. .+|.|.++.+++
T Consensus 318 ~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrg~G~~~~i~~ 379 (443)
T PRK06058 318 YGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGD------------------VRGRGAMIAIEL 379 (443)
T ss_pred CCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEe------------------eeccceEEEEEE
Confidence 56678887777777776532 2344445566666666543 22211 145678888876
Q ss_pred C-C------HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHH
Q 019543 260 G-S------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDK 332 (339)
Q Consensus 260 ~-~------~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~ 332 (339)
. + .+.+.++.+.+.+.|+.+..++. ..+.||+..-+..+++.|+.+.+
T Consensus 380 ~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~-------------------------~~~~lr~~Ppl~~t~~~i~~~~~ 434 (443)
T PRK06058 380 VKPGTTEPDAELTKALAAAAHAAGVIVLTCGT-------------------------YGNVIRLLPPLVIGDELLREGLD 434 (443)
T ss_pred ecCCCCCCcHHHHHHHHHHHHHCCeEEeccCC-------------------------CCCEEEEECCCccCHHHHHHHHH
Confidence 2 2 22355677777666766542210 12568887666555555554444
Q ss_pred HHh
Q 019543 333 ALR 335 (339)
Q Consensus 333 al~ 335 (339)
+|+
T Consensus 435 ~l~ 437 (443)
T PRK06058 435 VLE 437 (443)
T ss_pred HHH
Confidence 443
No 305
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.19 E-value=2.3e-09 Score=112.12 Aligned_cols=228 Identities=17% Similarity=0.158 Sum_probs=145.2
Q ss_pred hHHHHHHHHHhHhCCC--eEEEcCcHHHHHHH-HHHh-cCCC--CEEEEcCCCccchHHHHH------------------
Q 019543 56 TRDALESLLAKLDKAD--RALCFTSGMAALAA-VTHL-LGTG--EEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~--~~l~~~sG~~A~~~-il~l-l~~G--D~Vi~~~~~y~~~~~~~~------------------ 111 (339)
...+++..++++.|.+ ++-++.+++++..+ +++. +++| |+|++++..|+.+...++
T Consensus 149 al~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~ 228 (993)
T PLN02414 149 SLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF 228 (993)
T ss_pred HHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh
Confidence 3567888899999975 57788888887764 3342 4544 889999988887654432
Q ss_pred ------------------------HHHHHHHHHcCCEEEEeCCcCCCC--CcCcccCCCeEEEecccccc-----ccCCC
Q 019543 112 ------------------------RKIAEMAHAHGALLLVDNSIMSPV--LSRPLELGADIVMHSATKFI-----AGHSD 160 (339)
Q Consensus 112 ------------------------~~I~~la~~~g~~livD~a~a~g~--~~~~~~~~~Di~~~S~sK~l-----~g~~~ 160 (339)
++|+++||++|+++++ .++..+. ..++-++|+||++++.+|+. |||
T Consensus 229 ~~~~~~v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP-- 305 (993)
T PLN02414 229 DYSSGDVCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGP-- 305 (993)
T ss_pred ccccCceEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCC--
Confidence 8999999999999999 6665442 23455789999999999997 433
Q ss_pred ceEEEEEEcChhHHHHHHH-HH---------Hh-------------cCCCCChHHHHHH-Hhch----------hhHHHH
Q 019543 161 VMAGVLAVKGERLAKELYF-LQ---------NA-------------EGSGLAPFDCWIC-LRGV----------KTMALR 206 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~-~~---------~~-------------~~~~~~~~~a~~~-~~~l----------~~~~~r 206 (339)
..|++++++ ++.+.+.. +. +. +-.+.+.+..+.+ ...+ .-+...
T Consensus 306 -~aGflavr~-~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~I 383 (993)
T PLN02414 306 -HAAFLATSQ-EYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 383 (993)
T ss_pred -CeeEEEECH-HHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHH
Confidence 268999876 44332210 00 00 0011112211111 1111 112222
Q ss_pred HHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCccc
Q 019543 207 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKS 286 (339)
Q Consensus 207 ~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s 286 (339)
.++..+.+.++++.|+.. +++.+ .| + ...++.|.+++. .++.++|...||.++.
T Consensus 384 a~ri~~la~~l~~~L~~~-G~~~~-~~-----~-----------~f~~vt~~~~~~---~~v~~~L~~~gI~l~~----- 437 (993)
T PLN02414 384 AQRVHGLAGVFAAGLKKL-GFQVQ-SL-----P-----------FFDTVKVKCSDA---DAIADAAAKVGINLRV----- 437 (993)
T ss_pred HHHHHHHHHHHHHHHhhc-CCccC-CC-----C-----------CcCeEEEecCCH---HHHHHHHHHCCCeeEE-----
Confidence 345566788888888763 44321 11 1 345888887533 4567777666663331
Q ss_pred ceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 287 LISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 287 ~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+.++.||+|+...++++.|+.|.++|..
T Consensus 438 ----------------------~~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 438 ----------------------VDANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred ----------------------ecCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 1235699999999999999999999964
No 306
>PRK15029 arginine decarboxylase; Provisional
Probab=99.17 E-value=9e-10 Score=112.25 Aligned_cols=169 Identities=12% Similarity=0.092 Sum_probs=111.9
Q ss_pred chHHHHHHHHHhHhCCCeEEEcCcH-HHHHHH-HHHhcCCCCEEEEcCCCccchH-------------------------
Q 019543 55 PTRDALESLLAKLDKADRALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGTD------------------------- 107 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~sG-~~A~~~-il~ll~~GD~Vi~~~~~y~~~~------------------------- 107 (339)
....+.|+..|++||++++.+..+| +.+|.+ +++++++||.|+++++.+-...
T Consensus 205 G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~~ 284 (755)
T PRK15029 205 GAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGP 284 (755)
T ss_pred cHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccC
Confidence 4678999999999999999988888 567765 5568999999999876321111
Q ss_pred ------------HHHH------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-------C
Q 019543 108 ------------RLLS------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-------R 138 (339)
Q Consensus 108 ------------~~~~------------------------------~~I~~la~~~g~~livD~a~a~g~~~-------~ 138 (339)
..+. ++|+++|+++|++|+|||||+....+ .
T Consensus 285 i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~s 364 (755)
T PRK15029 285 IYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHY 364 (755)
T ss_pred CCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECccccccccCccccccc
Confidence 0110 89999999999999999999864311 2
Q ss_pred cc-----c-CCCe-EEEeccccccccCCCceEEEEEEcChh-H--HHHHHHHHHhcC-CCCCh-HHHH--HHHhchhh--
Q 019543 139 PL-----E-LGAD-IVMHSATKFIAGHSDVMAGVLAVKGER-L--AKELYFLQNAEG-SGLAP-FDCW--ICLRGVKT-- 202 (339)
Q Consensus 139 ~~-----~-~~~D-i~~~S~sK~l~g~~~~~gG~v~~~~~~-l--~~~l~~~~~~~~-~~~~~-~~a~--~~~~~l~~-- 202 (339)
++ . .|+| +++.|.+|.+++. .++.++..++.. . .++++....++. ++.+- +.|. .+.+.++.
T Consensus 365 a~~~~~~~~~Gad~~vvqStHKtL~al--TQaS~LHv~~~~~~id~~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~~~~ 442 (755)
T PRK15029 365 AMRGEPGDHNGPTVFATHSTHKLLNAL--SQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNS 442 (755)
T ss_pred cccccccccCCCceEEEEchhhcccch--hhhhhheeCCCccccCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhhhh
Confidence 22 2 5788 9999999999954 577888875531 1 245555544443 33222 2221 12222332
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCC
Q 019543 203 MALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 203 ~~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
-...+++..+.+..+++.+++.+
T Consensus 443 G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 443 GLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcc
Confidence 23335555666777777776654
No 307
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.17 E-value=7.9e-10 Score=104.94 Aligned_cols=227 Identities=16% Similarity=0.194 Sum_probs=138.7
Q ss_pred CCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHh--cCCC-CEEEEcCCCccchH--------------------
Q 019543 51 RSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL--LGTG-EEIVAGDDLYGGTD-------------------- 107 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~l--l~~G-D~Vi~~~~~y~~~~-------------------- 107 (339)
...++...+|+++|+++.+.+.++.++||++|+.+.+.+ ..+| ++|++.+..|+|..
T Consensus 62 ~~~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~ 141 (364)
T PRK04013 62 MFEHEEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLV 141 (364)
T ss_pred CcCCHHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCC
Confidence 345778899999999998888999999999999754432 2244 89988877666531
Q ss_pred -----------HHHH-----------------------------HHHHHHHHHcCCEEEEeCCcC---CCCCc--CcccC
Q 019543 108 -----------RLLS-----------------------------RKIAEMAHAHGALLLVDNSIM---SPVLS--RPLEL 142 (339)
Q Consensus 108 -----------~~~~-----------------------------~~I~~la~~~g~~livD~a~a---~g~~~--~~~~~ 142 (339)
..++ ++|.++|++||+++|+||++. +|..+ .....
T Consensus 142 ~~~~~~~~~d~~~l~~~i~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv 221 (364)
T PRK04013 142 PGFKHIPFNDVEAAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKV 221 (364)
T ss_pred CCcEEecCCCHHHHHHHhcCCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCC
Confidence 0000 899999999999999999985 22211 11233
Q ss_pred CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q 019543 143 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 143 ~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~ 222 (339)
..|+++ ++|.+++. ...|.++.+. ++. ......+..-+|..+++++..|+.+++. ...++++...+.+.
T Consensus 222 ~PDiv~--~gK~lggG--~P~~a~~~~~-~~~----~~~~~~T~~gnp~~~aaa~a~l~~i~~~--~l~~~~~~~l~~l~ 290 (364)
T PRK04013 222 EPDIVT--MGKGIGNG--VPVSLTLTNF-DVE----RGKHGSTFGGNPLACKAVAVTLRILRRE--RLVEKAGEKFIEIK 290 (364)
T ss_pred CCCEEE--ecccccCC--ceeEEEEecc-ccc----CCCcCCCCCcCHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHhc
Confidence 457766 59999963 3345555554 331 1111234566888888888777776432 12222222212221
Q ss_pred CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHH
Q 019543 223 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 302 (339)
Q Consensus 223 ~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~ 302 (339)
. +.|.. .+|.|.++.+++.+. +..+.+.+...|+.+...
T Consensus 291 ~-~~v~~------------------vRG~Gl~~gve~~~~--~~~i~~~~~~~Gll~~~~-------------------- 329 (364)
T PRK04013 291 G-ERVVT------------------TRGRGLMIGIVLKKP--VGKYVEELQNRGYLVHTA-------------------- 329 (364)
T ss_pred c-Cccee------------------eeeCcEEEEEEeCCc--HHHHHHHHHhCCcEEeeC--------------------
Confidence 1 21111 256788999998543 345666665556543211
Q ss_pred HHHhCCCCCCeEEEEec----cCCHHHHHHHHHHHHhc
Q 019543 303 VRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 336 (339)
Q Consensus 303 ~~~~~g~~~~~lRisvg----~e~~~~li~~l~~al~~ 336 (339)
..+.|||..- .++.++.++.|.++|++
T Consensus 330 -------g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 330 -------GQRVIRLLPPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred -------CCCEEEEeCCcccCHHHHHHHHHHHHHHHHH
Confidence 1245777664 45566667777777654
No 308
>PLN02880 tyrosine decarboxylase
Probab=99.16 E-value=5.4e-09 Score=103.03 Aligned_cols=130 Identities=18% Similarity=0.227 Sum_probs=86.6
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcC-----ccc--CCCeEEEeccccccccCCCceEEEEEEcChhH-HHHHHHHHHh
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSR-----PLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYFLQNA 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~-----~~~--~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l-~~~l~~~~~~ 183 (339)
++|+++|++||+++.||+||+.+.... .+. .++|.++.+++|++..| ...|+++.++... .+.+..-..+
T Consensus 259 ~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P--~~~g~llvr~~~~l~~~~~~~~~Y 336 (490)
T PLN02880 259 LELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTN--FDCSLLWVKDRNALIQSLSTNPEF 336 (490)
T ss_pred HHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCC--ccEEEEEEeCHHHHHHHHccCHHH
Confidence 999999999999999999998764422 122 26799999999999866 4467888775322 1211110111
Q ss_pred c--------------------CCCCChHHHHHH--HhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCch
Q 019543 184 E--------------------GSGLAPFDCWIC--LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 241 (339)
Q Consensus 184 ~--------------------~~~~~~~~a~~~--~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~ 241 (339)
. |-....+..|.. ..+.+.+.+++++..+.++++.+.+++.++++.+.-|
T Consensus 337 l~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~-------- 408 (490)
T PLN02880 337 LKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR-------- 408 (490)
T ss_pred hcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC--------
Confidence 0 000112233333 2356778888888889999999999999887755433
Q ss_pred HhHhhhcCCCcceEEEeeC
Q 019543 242 ELHYSQAKGAGSVLSFLTG 260 (339)
Q Consensus 242 ~~~~~~~~~~~~ivs~~~~ 260 (339)
..+++.|.+.
T Consensus 409 ---------~~~iv~Fr~~ 418 (490)
T PLN02880 409 ---------IFSLVCFRLV 418 (490)
T ss_pred ---------ceEEEEEEEe
Confidence 3568888864
No 309
>PRK06105 aminotransferase; Provisional
Probab=99.16 E-value=3.2e-09 Score=104.03 Aligned_cols=178 Identities=11% Similarity=0.124 Sum_probs=108.1
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH----
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---- 181 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~---- 181 (339)
++|.++|++||+++|+||++ +.|-.+.. .....||+ +++|.++|.. .-.|++++++ ++.+.+....
T Consensus 242 ~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~--~~gK~lggG~-~P~~av~~~~-~i~~~~~~~~~~~~ 317 (460)
T PRK06105 242 EKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDIL--VMSKQLSSSY-QPLSAVLMNE-KVYDPIADESGKIG 317 (460)
T ss_pred HHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCee--eeecccccCc-ccceEEEEcH-HHHHHHhcccccCc
Confidence 99999999999999999998 55543322 12345766 5799998631 2356666664 6666554311
Q ss_pred ---HhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEE
Q 019543 182 ---NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 256 (339)
Q Consensus 182 ---~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs 256 (339)
..++...+|+.++.++..|+.+.+ ..++.++..+++.+.|+++.. +|... ..+|.|.++.
T Consensus 318 ~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l~~-----~~~v~----------~vrG~Gl~~g 382 (460)
T PRK06105 318 TFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRALAD-----HPLVG----------EVRGVGLIAA 382 (460)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-----CCCeE----------EEEecceEEE
Confidence 123456788888888777777643 356666677777777765421 22110 0245778888
Q ss_pred EeeCCH-----------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEec----cC
Q 019543 257 FLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IE 321 (339)
Q Consensus 257 ~~~~~~-----------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg----~e 321 (339)
|++... ..+.++...+...|+.+. | ..+.+|++.- .+
T Consensus 383 ie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~----------~------------------~g~~i~l~Ppl~it~~ 434 (460)
T PRK06105 383 VELVADKATKTPFEPPGKVGARANAAAHEHGVISR----------A------------------MGDTLAFCPPLIITAA 434 (460)
T ss_pred EEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEE----------e------------------cCCEEEEECCCccCHH
Confidence 876211 123456666655555432 1 1146777754 45
Q ss_pred CHHHHHHHHHHHHhc
Q 019543 322 DVNDLISDLDKALRT 336 (339)
Q Consensus 322 ~~~~li~~l~~al~~ 336 (339)
+.+..++.|.++|++
T Consensus 435 eid~~~~~l~~~l~~ 449 (460)
T PRK06105 435 QVDEMVDRFGRALDD 449 (460)
T ss_pred HHHHHHHHHHHHHHH
Confidence 566666777776654
No 310
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.16 E-value=3.8e-09 Score=103.41 Aligned_cols=146 Identities=11% Similarity=0.160 Sum_probs=83.4
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCcc---cCC--CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRPL---ELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~~---~~~--~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|+||++. .+..+... ..+ .|+ .|+||.+++ | ...|++++++ ++.+.+.......+
T Consensus 243 ~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi--~t~sK~l~~-G-~pig~v~~~~-~i~~~~~~~~~~~T 317 (451)
T PRK06918 243 QEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDL--ITVSKSLGA-G-VPISGVIGRK-EIMDESAPGELGGT 317 (451)
T ss_pred HHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCE--EeeehhhcC-C-CccEEEEEcH-HHHhccCCCCcCcC
Confidence 899999999999999999974 33222211 122 574 479999994 4 4556777764 56665543222234
Q ss_pred CCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee
Q 019543 186 SGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 259 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~ 259 (339)
...+|+..+++...++.+. ...++.++..+++.+.|+. ++.+..+ ++.|.++.+.+
T Consensus 318 ~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~v------------------rg~G~~~~~~~ 379 (451)
T PRK06918 318 YAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDV------------------RGLGAMCAFEL 379 (451)
T ss_pred CCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCceee------------------ccceeEEEEEE
Confidence 5567777666555555441 1122233334445555443 2221111 34567777665
Q ss_pred C--------CHHHHHHHHccCCcceeecc
Q 019543 260 G--------SLALSKHVVETTKYFSITVS 280 (339)
Q Consensus 260 ~--------~~~~~~~~~~~L~~~~i~v~ 280 (339)
. +.+.+.++.+.+...|+.+.
T Consensus 380 ~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~ 408 (451)
T PRK06918 380 VQDRKTKEPDKTLTANICKEANKRGLLLL 408 (451)
T ss_pred ccCCCcCCCcHHHHHHHHHHHHHCCeEEe
Confidence 2 22345667777767677554
No 311
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.15 E-value=1.8e-09 Score=95.00 Aligned_cols=174 Identities=21% Similarity=0.196 Sum_probs=119.9
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcCCCCEEEEcCCCccchHH------------------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLGTGEEIVAGDDLYGGTDR------------------------ 108 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~~GD~Vi~~~~~y~~~~~------------------------ 108 (339)
.|-...+-+.|+++.|.+.+-++++.-.|-++++. +.++||.|+++.+.+..++-
T Consensus 60 kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~ 139 (382)
T COG1103 60 KPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITP 139 (382)
T ss_pred CCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecH
Confidence 35555555559999999888888887888887664 89999999998764332221
Q ss_pred -----HHH----------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEeccccc
Q 019543 109 -----LLS----------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKF 154 (339)
Q Consensus 109 -----~~~----------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK~ 154 (339)
.+. +.++++|+++|+++++..|+..|-. .+..+.++|++++|.+|+
T Consensus 140 e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKs 219 (382)
T COG1103 140 EGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKS 219 (382)
T ss_pred HHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEecCccc
Confidence 111 8999999999999999999988754 344567999999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHH-H--------hcCCCCChHHHHHHHhchhhHHHHHHHH---HHHHHHHHHHHh
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQ-N--------AEGSGLAPFDCWICLRGVKTMALRVEKQ---QDNAQKIAEFLA 222 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~-~--------~~~~~~~~~~a~~~~~~l~~~~~r~~~~---~~~a~~l~~~L~ 222 (339)
++..+ -.|++..+ +++.+.+.+.. + ++|++.--+....+..++....+|+++. .++++.+.+.|+
T Consensus 220 mAAs~--PiGvl~~~-eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elE 296 (382)
T COG1103 220 MAASA--PIGVLAMS-EEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELE 296 (382)
T ss_pred hhccC--CeeEEeeh-hHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98544 35788776 46777665432 1 2343322111222334455555555543 467888888888
Q ss_pred CCCCceEE
Q 019543 223 SHPRVKKV 230 (339)
Q Consensus 223 ~~~~i~~v 230 (339)
.+.++..+
T Consensus 297 kigg~~ql 304 (382)
T COG1103 297 KIGGVKQL 304 (382)
T ss_pred HhhhHHHh
Confidence 88776543
No 312
>PLN03032 serine decarboxylase; Provisional
Probab=99.14 E-value=9.2e-09 Score=97.77 Aligned_cols=181 Identities=15% Similarity=0.133 Sum_probs=114.9
Q ss_pred ccCCCCchHHHHHHHHHhHhCCC--eE--EEcCcHHHHHHH-HHH--hcCCCCEEEEcCCCccchHHHHH----------
Q 019543 49 YTRSGNPTRDALESLLAKLDKAD--RA--LCFTSGMAALAA-VTH--LLGTGEEIVAGDDLYGGTDRLLS---------- 111 (339)
Q Consensus 49 y~r~~~~~~~~le~~la~~~g~~--~~--l~~~sG~~A~~~-il~--ll~~GD~Vi~~~~~y~~~~~~~~---------- 111 (339)
|++.....-+++.+.+++++|.+ ++ +++++||.||.. +.. -..++++|+++...+.......+
T Consensus 60 ~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~ 139 (374)
T PLN03032 60 YGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVP 139 (374)
T ss_pred CCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEee
Confidence 33333445567777888899864 33 777888999864 332 12356788887665443332211
Q ss_pred -----------------------------------------HHHHHHHHHcC-----CEEEEeCCcCCCCCc-----C--
Q 019543 112 -----------------------------------------RKIAEMAHAHG-----ALLLVDNSIMSPVLS-----R-- 138 (339)
Q Consensus 112 -----------------------------------------~~I~~la~~~g-----~~livD~a~a~g~~~-----~-- 138 (339)
++|+++|++|| +++.+|.|++.+... .
T Consensus 140 ~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~ 219 (374)
T PLN03032 140 TLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEV 219 (374)
T ss_pred eCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCccc
Confidence 99999999997 489999999765431 0
Q ss_pred cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh--------cCCC--CChHHHHHHH--hchhhHHHH
Q 019543 139 PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------EGSG--LAPFDCWICL--RGVKTMALR 206 (339)
Q Consensus 139 ~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--------~~~~--~~~~~a~~~~--~~l~~~~~r 206 (339)
....++|.++.|.+|+++.|- ..|+++.++ ...+.+.....+ .|.. ...+..|..+ .+.+.+.++
T Consensus 220 ~~~~~vDSis~s~HK~~g~P~--g~G~ll~r~-~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~ 296 (374)
T PLN03032 220 TFRKPIGSVSVSGHKFLGCPM--PCGVALTRK-KHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRD 296 (374)
T ss_pred CCCcCCcEEEECcccccCCCc--CeEEEEEEc-hhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHH
Confidence 112368999999999988553 357787776 344433211111 1222 1233444443 345677888
Q ss_pred HHHHHHHHHHHHHHHhCCCCceEEecC
Q 019543 207 VEKQQDNAQKIAEFLASHPRVKKVNYA 233 (339)
Q Consensus 207 ~~~~~~~a~~l~~~L~~~~~i~~v~~p 233 (339)
.++..++++++.+.|++. ++..+..|
T Consensus 297 ~~~~~~~a~~l~~~l~~~-~~~~~~~p 322 (374)
T PLN03032 297 VQHCMRNAHYLKDRLTEA-GLTCRLNE 322 (374)
T ss_pred HHHHHHHHHHHHHHHHhC-CCcEEECC
Confidence 999999999999999886 44444444
No 313
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.13 E-value=4.7e-09 Score=101.52 Aligned_cols=178 Identities=13% Similarity=0.148 Sum_probs=106.4
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCc-----CcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~-----~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|+||++. .|-.+ .......|+++ ++|++++.| ...|++++++ ++ +.+.......+
T Consensus 218 ~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~--~~K~lg~~G-~pigav~~~~-~~-~~~~~~~~~~T 292 (412)
T TIGR02407 218 QRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVC--LSKSISGYG-LPLALTLIKP-EL-DVWKPGEHNGT 292 (412)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEE--echhccCCc-cceeEEEEch-hh-hccCCCccCCC
Confidence 899999999999999999984 33211 11233558764 689998634 4456777764 33 33321111123
Q ss_pred CCCChHHHHHHHhchhh-HH--HHHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEe
Q 019543 186 SGLAPFDCWICLRGVKT-MA--LRVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 258 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~-~~--~r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~ 258 (339)
..-+|+.++.+...++. +. ...++..+..+++.+.|+. ++.+. .. .++.|.+++++
T Consensus 293 ~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~-~~----------------vrg~Gl~~~l~ 355 (412)
T TIGR02407 293 FRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELI-KQ----------------VRGRGLMQGIE 355 (412)
T ss_pred CCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCce-Ee----------------eecceeEEEEE
Confidence 34466655555555553 21 1233334444555555543 33210 11 14568899999
Q ss_pred eCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 259 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 259 ~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+.+.+.+.++.+.+...|+.+...+ ...+.|||+..+..+++.++.+.++|++
T Consensus 356 l~~~~~~~~~~~~~~~~Gv~v~~~~-------------------------~~~~~lr~~p~l~~t~~~i~~~~~~l~~ 408 (412)
T TIGR02407 356 CGDGDLAGKIAKAAFENGLIIETSG-------------------------PNDEVIKLLPPLTIDEETLQQGLDILEQ 408 (412)
T ss_pred ecChHHHHHHHHHHHHCCCEEeccC-------------------------CCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 9766666788888877777654211 1236799999988888777777777654
No 314
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.12 E-value=7.1e-09 Score=99.47 Aligned_cols=180 Identities=15% Similarity=0.222 Sum_probs=107.4
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-C---CCCc--CcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-S---PVLS--RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~---g~~~--~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
+++.++|++||+++|+||++. . |.+. .......||++ ++|.+++ | .-.|.++.++ ++.+ ...-....+
T Consensus 246 ~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt--~aK~ig~-G-~Pl~avv~r~-ei~~-~~~g~~~~T 319 (447)
T COG0160 246 KALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVT--LAKSLGG-G-LPLSAVVGRA-EIMD-WPPGGHGGT 319 (447)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEE--ecccccC-C-CceeEEeccH-Hhcc-cCCcccCCC
Confidence 999999999999999999993 2 3221 11222458876 6899996 3 4456666664 5544 221111233
Q ss_pred CCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee-CC-
Q 019543 186 SGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GS- 261 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~-~~- 261 (339)
..=+|..++.++..|+.+++ ..++..+.-+++.+.|.++.. .||.+.+ .+|.|-++-+++ .+
T Consensus 320 f~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~----~~~~Igd----------VRG~Glm~giE~v~d~ 385 (447)
T COG0160 320 FGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQE----KHPLIGD----------VRGLGLMIGVELVKDR 385 (447)
T ss_pred CCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHh----hcCceec----------ccccceEEEEEEecCC
Confidence 55578888888877776543 334444455566666654321 1221110 256788888875 22
Q ss_pred ------HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEecc----CCHHHHHHHHH
Q 019543 262 ------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLD 331 (339)
Q Consensus 262 ------~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~----e~~~~li~~l~ 331 (339)
.+.+.++++.+.+.|+.+. .+ |...+.|||..=+ |+.+..++.|.
T Consensus 386 ~t~~p~~~~~~~i~~~~~~~Glil~---------~~----------------G~~~nviRi~PPL~is~e~~d~~l~il~ 440 (447)
T COG0160 386 DTKEPDAELAAKIVARAFERGLLLL---------TC----------------GPHGNVLRILPPLTISDEELDEGLDILE 440 (447)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEe---------cc----------------CCCCcEEEEeCCcccCHHHHHHHHHHHH
Confidence 2456778887777665432 11 1234678887755 55566666666
Q ss_pred HHHhc
Q 019543 332 KALRT 336 (339)
Q Consensus 332 ~al~~ 336 (339)
++|++
T Consensus 441 ~al~~ 445 (447)
T COG0160 441 EALKE 445 (447)
T ss_pred HHHHh
Confidence 66654
No 315
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.12 E-value=6.5e-09 Score=101.79 Aligned_cols=193 Identities=17% Similarity=0.210 Sum_probs=115.5
Q ss_pred cCCCCchHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHHHhc---CCCCEEEEcCCCccch------------------
Q 019543 50 TRSGNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHLL---GTGEEIVAGDDLYGGT------------------ 106 (339)
Q Consensus 50 ~r~~~~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il~ll---~~GD~Vi~~~~~y~~~------------------ 106 (339)
++..++...+|+++|+++.+. +.+.+++||++|+.+.+.+. ....+|++-...|+|.
T Consensus 108 ~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~ 187 (459)
T PRK06082 108 RRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMG 187 (459)
T ss_pred CccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCC
Confidence 345677788999999998853 57888899999997544332 2335565533333221
Q ss_pred ---------------------------------HHHHH--------------------------HHHHHHHHHcCCEEEE
Q 019543 107 ---------------------------------DRLLS--------------------------RKIAEMAHAHGALLLV 127 (339)
Q Consensus 107 ---------------------------------~~~~~--------------------------~~I~~la~~~g~~liv 127 (339)
...+. ++|.++|++||+++|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~ 267 (459)
T PRK06082 188 PLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLII 267 (459)
T ss_pred CCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 01110 8999999999999999
Q ss_pred eCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh
Q 019543 128 DNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 201 (339)
Q Consensus 128 D~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~ 201 (339)
||++. .|-.+.. .....||++ ++|.+++..-.+ |.+++++ ++.+........++...+|+.+++++..|+
T Consensus 268 DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~~P~-~av~~~~-~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 343 (459)
T PRK06082 268 DEIPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGGGLVPI-AAMITKD-KYNTAAQISLGHYTHEKSPLGCAAALATIE 343 (459)
T ss_pred echhhCCCccchhhHhHhhCCCCCEEE--ecccccCCCCcc-eEEEEcH-HHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99984 2222221 223458886 799999632123 4555554 443322110012355678888887777777
Q ss_pred hHH--HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC
Q 019543 202 TMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 260 (339)
Q Consensus 202 ~~~--~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~ 260 (339)
.+. ...++.++..+++.+.|+.+.. .+|... ..+|.|.++.+++.
T Consensus 344 ~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~i~----------~vrG~Gl~~~ve~~ 390 (459)
T PRK06082 344 VIEQEGLLEKVKADSQFMRERLLEMKA----KYPLIG----------DVRGIGLLWGVELV 390 (459)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHh----hCCCee----------eeeeccceeEEEEc
Confidence 663 2355566667777777765311 011100 02467888888873
No 316
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.11 E-value=1e-08 Score=100.13 Aligned_cols=175 Identities=14% Similarity=0.145 Sum_probs=101.4
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|.||++. .|-.+.. .....|+++ ++|.+++ |.. .|++++++ ++ +.+.......+
T Consensus 230 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~-G~P-igav~~~~-~~-~~~~~~~~~~T 303 (442)
T TIGR00709 230 QKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVGG-GLP-LAVLLIAP-EF-DAWQPAGHTGT 303 (442)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--EcccccC-Ccc-cEEEEEch-HH-hccCCCcCCCC
Confidence 999999999999999999973 3332221 223458887 7999997 444 45666664 33 33221111123
Q ss_pred CCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee
Q 019543 186 SGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 259 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~ 259 (339)
..-+|+.+++++..|+.+++ ..++.++..+++.+.|++ +|.|.. .+|.|.++.+++
T Consensus 304 ~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~------------------vrG~Gl~~~ie~ 365 (442)
T TIGR00709 304 FRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGN------------------VRGRGLMQGIMI 365 (442)
T ss_pred CCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeee------------------eeccceEEEEEE
Confidence 45678887777777766532 234444555666666654 232221 246788888887
Q ss_pred CCH--------------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHH
Q 019543 260 GSL--------------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVND 325 (339)
Q Consensus 260 ~~~--------------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~ 325 (339)
.+. +.+.++...+...|+.+...+ ...+.||+..-+..+++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-------------------------~~~~~l~~~Ppl~it~~ 420 (442)
T TIGR00709 366 VDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGG-------------------------REGEVFRLLCPITIDQE 420 (442)
T ss_pred ccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecC-------------------------CCCCEEEEECCCCCCHH
Confidence 321 123456655555565443111 12367888887766665
Q ss_pred HHHHHHHHHh
Q 019543 326 LISDLDKALR 335 (339)
Q Consensus 326 li~~l~~al~ 335 (339)
.++.+.++|+
T Consensus 421 ei~~~~~~l~ 430 (442)
T TIGR00709 421 ECEEGISRFK 430 (442)
T ss_pred HHHHHHHHHH
Confidence 5555555443
No 317
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.11 E-value=9.2e-09 Score=100.63 Aligned_cols=175 Identities=11% Similarity=0.100 Sum_probs=106.4
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|+||++. .|-.+.. .....|+++ ++|.+++. .-.|++++++ ++.+.. .-...++
T Consensus 246 ~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG--~pi~av~~~~-~i~~~~-~~~~~~T 319 (457)
T PRK05639 246 KELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVASG--MGLSGVIGRK-ELMDLT-SGSALLT 319 (457)
T ss_pred HHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcCC--CcceeEEehH-HHHhhc-CCCcccC
Confidence 999999999999999999984 2222221 223468888 79999853 2235666664 565521 1111234
Q ss_pred CCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee
Q 019543 186 SGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 259 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~ 259 (339)
...+|..+++++..|+.+.. ..++.++..+++.+.|++ ++.+.. .+|.|.++.+.+
T Consensus 320 ~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~------------------VrG~Gl~~gve~ 381 (457)
T PRK05639 320 PAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGD------------------VRGKGLMIGVEI 381 (457)
T ss_pred CCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEe------------------eccceeEEEEEE
Confidence 56788887777777776532 234445566677776654 222211 246778888876
Q ss_pred CC------HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHH
Q 019543 260 GS------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKA 333 (339)
Q Consensus 260 ~~------~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~a 333 (339)
.. ...+..+.+.+...|+.+... |...+.|||+.-+..+++.++.+.++
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-------------------------g~~~~~lr~~Ppl~it~~~id~~~~~ 436 (457)
T PRK05639 382 VKENGKPDPELTGKICWRAFELGLILPSY-------------------------GMFGNVIRITPPLVITKEIAEKGLEI 436 (457)
T ss_pred ecCCCCCCHHHHHHHHHHHHhCCeEEeec-------------------------CCCCCEEEEeCCCccCHHHHHHHHHH
Confidence 21 233556777776667654311 01236799998876666666655555
Q ss_pred Hh
Q 019543 334 LR 335 (339)
Q Consensus 334 l~ 335 (339)
|+
T Consensus 437 l~ 438 (457)
T PRK05639 437 ME 438 (457)
T ss_pred HH
Confidence 54
No 318
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.08 E-value=4e-08 Score=91.18 Aligned_cols=163 Identities=16% Similarity=0.194 Sum_probs=111.5
Q ss_pred HHHHHHHhHh----C------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 59 ALESLLAKLD----K------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 59 ~le~~la~~~----g------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
.+++.+|++. | .+..++++++++|+.++. .|..|||..+++.|-|+|..+-++
T Consensus 125 ~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~ 204 (471)
T KOG0256|consen 125 SFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSN 204 (471)
T ss_pred HHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCC
Confidence 4555566554 3 457888888899998654 588999999999999988642111
Q ss_pred --------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc-----cc-
Q 019543 112 --------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP-----LE- 141 (339)
Q Consensus 112 --------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~-----~~- 141 (339)
..++..|.++|+-||+||.++..++... ++
T Consensus 205 ~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev 284 (471)
T KOG0256|consen 205 GFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEV 284 (471)
T ss_pred CccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHH
Confidence 6678889999999999999986665321 11
Q ss_pred -----CCCe--EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh-------HHHHH
Q 019543 142 -----LGAD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-------MALRV 207 (339)
Q Consensus 142 -----~~~D--i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~-------~~~r~ 207 (339)
...| -++.|+||=+|-|| ..-|.|.+.++..+...+++.. ++. .++....++...|.. +++..
T Consensus 285 ~~~~~~~~~rvHivyslSKD~GlpG-fRvGviYS~ne~VvsaA~kmss-f~~-vSs~tQ~~la~LLSD~~f~~~yl~en~ 361 (471)
T KOG0256|consen 285 RKDPHLDPDRVHIVYSLSKDFGLPG-FRVGVIYSNNEDVVSAATKMSS-FGL-VSSQTQYLLASLLSDEEFTREYLRENN 361 (471)
T ss_pred hhccccCCCcEEEEEEeccccCCCc-eEEEEEEecChHHHHHHHHHhh-ccC-CcHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 1112 46789999999887 5678999998877777776654 332 344444433332221 34455
Q ss_pred HHHHHHHHHHHHHHhCC
Q 019543 208 EKQQDNAQKIAEFLASH 224 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~~ 224 (339)
+++++..+++.+.|+++
T Consensus 362 ~Rl~~rh~~~~~gLk~l 378 (471)
T KOG0256|consen 362 KRLRIRHRYIVEGLKAL 378 (471)
T ss_pred HHHHHHHHHHHhhHHhc
Confidence 66666777888888876
No 319
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.07 E-value=8e-09 Score=100.32 Aligned_cols=106 Identities=11% Similarity=0.106 Sum_probs=68.6
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCC-CcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH--h
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPV-LSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--A 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~-~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~ 183 (339)
++|.++|++||+++|+||+| +|. .+. -.....|+++ ++|.+++. ..+|++++++ ++.+.+..... .
T Consensus 225 ~~l~~lc~~~g~llI~DEv~-tG~R~G~~ga~~~~gv~PDi~~--~gK~lggG--~p~~av~~~~-~i~~~~~~~~~~~~ 298 (433)
T PRK00615 225 EGIIQTCRRTGSLSIMDEVV-TGFRVAQGGAAAIYHVKPDITV--YGKILGGG--LPAAAVVAHK-SIMDHLAPEGTIFQ 298 (433)
T ss_pred HHHHHHHHHcCCEEEEEccc-ccccccHhHHHHhcCCCCCeEE--EcccccCC--cceeeeeecH-HHHhhhcCCCCccc
Confidence 69999999999999999999 343 111 1123458765 79999852 4467887765 67776643211 1
Q ss_pred -cCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhC
Q 019543 184 -EGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 184 -~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~ 223 (339)
.+...+|..+++++..|+.+. ...++.+++.+++.+.|++
T Consensus 299 ~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~ 341 (433)
T PRK00615 299 AGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEE 341 (433)
T ss_pred CCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 233567888877777776653 2355555666666555543
No 320
>PLN02590 probable tyrosine decarboxylase
Probab=99.06 E-value=5.1e-08 Score=96.65 Aligned_cols=130 Identities=19% Similarity=0.233 Sum_probs=87.0
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcCc----cc---CCCeEEEeccccccccCCCceEEEEEEcChh-HHHHHHHHHHh
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSRP----LE---LGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELYFLQNA 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~~----~~---~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~-l~~~l~~~~~~ 183 (339)
++|.++|++||+++.||+|++......+ +- ..+|-++...+|++..+ ..+|++++++.. +.+.+..-..+
T Consensus 307 ~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p--~~cg~llvr~~~~l~~a~~~~~~Y 384 (539)
T PLN02590 307 VPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFAN--QTCSPLWVKDRYSLIDALKTNPEY 384 (539)
T ss_pred HHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcC--cCEEEEEecCHHHHHHHhhcCHHH
Confidence 9999999999999999999976543211 11 14699999999999866 446788777642 22222110101
Q ss_pred c----------------CC----CCChHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCch
Q 019543 184 E----------------GS----GLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 241 (339)
Q Consensus 184 ~----------------~~----~~~~~~a~~~~~--~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~ 241 (339)
. +. ....+..|+.++ +.+.+.+++++..+.++++.+.+++.+.++.+.-|
T Consensus 385 L~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~-------- 456 (539)
T PLN02590 385 LEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTR-------- 456 (539)
T ss_pred hCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--------
Confidence 0 11 111233444443 45678889999999999999999999988766544
Q ss_pred HhHhhhcCCCcceEEEeeC
Q 019543 242 ELHYSQAKGAGSVLSFLTG 260 (339)
Q Consensus 242 ~~~~~~~~~~~~ivs~~~~ 260 (339)
.-++|.|.+.
T Consensus 457 ---------~l~iVcFr~~ 466 (539)
T PLN02590 457 ---------YFSLVCFRLA 466 (539)
T ss_pred ---------ceEEEEEEec
Confidence 2468888763
No 321
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.06 E-value=2e-08 Score=97.90 Aligned_cols=177 Identities=16% Similarity=0.122 Sum_probs=103.6
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|+||++. .|..+.. .....|+++ ++|.+++ | ...|++++++ ++.+.... ....+
T Consensus 245 ~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt--~~K~l~~-G-~p~gav~~~~-~i~~~~~~-~~~~T 318 (441)
T PRK05769 245 KELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIIT--LAKAIAG-G-LPLGAVIGRA-ELMFLPPG-SHANT 318 (441)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEE--EcccccC-C-cccEEEEEeh-hhhhcCCC-CCCCC
Confidence 899999999999999999985 3222221 122348774 7899995 3 4456677764 45432211 11112
Q ss_pred CCCChHHHHHHHhchhhHHH-HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--
Q 019543 186 SGLAPFDCWICLRGVKTMAL-RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-- 262 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~~-r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-- 262 (339)
...+|..++.++..|+.+.+ ..++.++..+++.+.|+.+.. .+|.. . ..+|.|.++.+++.+.
T Consensus 319 ~~g~p~~~aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~~l~~----~~~~~-~---------~vrg~G~~~~i~~~~~~~ 384 (441)
T PRK05769 319 FGGNPVAAAAALATLEELEEGLLENAQKLGEYLRKELKELKE----KYEFI-G---------DVRGLGLMIGVELVKDRK 384 (441)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCCCe-e---------eeecceEEEEEEeccCCc
Confidence 34467777777666666543 344555666777777754310 01110 0 0245788898887321
Q ss_pred ----HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 263 ----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 263 ----~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..+..+.+.+...|+.+. | ...+.+||+..+..+++.|+.+.++|+
T Consensus 385 ~~~~~~~~~~~~~~~~~Gil~~----------~-----------------~~~~~lr~~p~l~~t~~~id~~~~~l~ 434 (441)
T PRK05769 385 EPDPKLRDKVLYEAFKRGLLLL----------G-----------------AGKSAIRIIPPLIITEEEADIGLEILE 434 (441)
T ss_pred cccHHHHHHHHHHHHhCCcEEe----------c-----------------CCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 234566666666565432 1 023578999888666666666655554
No 322
>PRK05965 hypothetical protein; Provisional
Probab=99.05 E-value=1.3e-08 Score=99.73 Aligned_cols=179 Identities=10% Similarity=0.098 Sum_probs=106.3
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHH------
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF------ 179 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~------ 179 (339)
++|.++|++||+++|.||++. .|-.+. ......||++ ++|.++|.--.+ |.+++++ ++.+.+..
T Consensus 239 ~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~~Pi-~av~~~~-~i~~~~~~~~~~~~ 314 (459)
T PRK05965 239 KAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT--VAKGLTSGYVPM-GAVLMSD-HVYQGIADGAGAAA 314 (459)
T ss_pred HHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEE--echhhccCCcce-eEEEEcH-HHHHHHhccccccc
Confidence 999999999999999999973 332221 1223458887 589998631124 4555654 56665532
Q ss_pred -HHHhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEE
Q 019543 180 -LQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 256 (339)
Q Consensus 180 -~~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs 256 (339)
+....+..-+|+.+++++..|+.+++ ..++.++..+++.+.|+++.. +|... ..+|.|.++.
T Consensus 315 ~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~-----~~~v~----------~vrG~Gl~~g 379 (459)
T PRK05965 315 PVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRA-----HPLVG----------DVRGRGLLGA 379 (459)
T ss_pred cccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcc-----CCCEE----------EEeecceEEE
Confidence 11122345678888888777776633 245555666677777765311 22110 0256788888
Q ss_pred EeeC-CH----------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEE----eccC
Q 019543 257 FLTG-SL----------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIE 321 (339)
Q Consensus 257 ~~~~-~~----------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRis----vg~e 321 (339)
|++. +. ..+.++.+.+...|+.+. + ...+.||+. ++-+
T Consensus 380 ie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~----------~-----------------~g~~~i~~~PpL~it~~ 432 (459)
T PRK05965 380 LELVADKATKTPFDAALDPADRIFDRAYANGLVFR----------A-----------------FGDGVLGFAPALCCTEG 432 (459)
T ss_pred EEEeccccccCCCCchhHHHHHHHHHHHhCCeEEE----------e-----------------cCCcEEEEECCCcCCHH
Confidence 8762 11 124556666666665432 1 023568888 5556
Q ss_pred CHHHHHHHHHHHHhc
Q 019543 322 DVNDLISDLDKALRT 336 (339)
Q Consensus 322 ~~~~li~~l~~al~~ 336 (339)
+.+++++.|.++|++
T Consensus 433 ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 433 EFDLIFERTRKTLDD 447 (459)
T ss_pred HHHHHHHHHHHHHHH
Confidence 666667777777654
No 323
>PRK07046 aminotransferase; Validated
Probab=99.04 E-value=2.7e-08 Score=97.21 Aligned_cols=165 Identities=18% Similarity=0.116 Sum_probs=103.8
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHh---cCCCCEEEEcCCCccchH-----------------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTD----------------------- 107 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~l---l~~GD~Vi~~~~~y~~~~----------------------- 107 (339)
++...+|.++|.++.+.+.+.+++||++|+...+.+ ....+.|+.-...|+|..
T Consensus 114 ~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~ 193 (453)
T PRK07046 114 SEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVH 193 (453)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCc
Confidence 455556777777777778899999999999754432 333566766554454431
Q ss_pred ------------------HHHH--------------------------HHHHHHHHHcCCEEEEeCCcC----CCCCcCc
Q 019543 108 ------------------RLLS--------------------------RKIAEMAHAHGALLLVDNSIM----SPVLSRP 139 (339)
Q Consensus 108 ------------------~~~~--------------------------~~I~~la~~~g~~livD~a~a----~g~~~~~ 139 (339)
..+. ++|.++|++||+++|+||++. .|-...-
T Consensus 194 ~~~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~ 273 (453)
T PRK07046 194 DLTATTRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRA 273 (453)
T ss_pred cccCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHH
Confidence 0000 899999999999999999984 2211111
Q ss_pred ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH------H-hc--CCCCChHHHHHHHhchhhHH--HHHH
Q 019543 140 LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ------N-AE--GSGLAPFDCWICLRGVKTMA--LRVE 208 (339)
Q Consensus 140 ~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~------~-~~--~~~~~~~~a~~~~~~l~~~~--~r~~ 208 (339)
.....|+++ ++|.++|. .-.|++++++ ++.+.+.... . .. +..-+|+.+++++..|+.+. ...+
T Consensus 274 ~gv~PDi~t--~gK~lggG--~Pi~av~g~~-~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~ 348 (453)
T PRK07046 274 HGLEPDFLV--VGKPIAGG--VPCAVYGFSA-ELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYA 348 (453)
T ss_pred hCCCcccee--ehhhhcCC--CcceeeeehH-HHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHH
Confidence 233458875 79999963 4456777764 6766664311 0 11 23457888777777776552 2345
Q ss_pred HHHHHHHHHHHHHhC
Q 019543 209 KQQDNAQKIAEFLAS 223 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~ 223 (339)
+.++..++|.+.|+.
T Consensus 349 ~~~~~g~~l~~~L~~ 363 (453)
T PRK07046 349 HMLALAARLAAGLRA 363 (453)
T ss_pred HHHHHHHHHHHHHHH
Confidence 555666666666653
No 324
>PRK06062 hypothetical protein; Provisional
Probab=99.03 E-value=3.8e-08 Score=96.26 Aligned_cols=108 Identities=15% Similarity=0.183 Sum_probs=63.3
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH--HHh
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNA 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~--~~~ 183 (339)
++|.++|++||+++|+||++. .|-.+.. .....|++ +++|.+++.--.+|+ +++++ ++.+.+... ...
T Consensus 238 ~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~--t~gK~lggG~~Piga-v~~~~-~i~~~~~~~~~~~~ 313 (451)
T PRK06062 238 AGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLI--TFAKGVNSGYVPLGG-VAISE-AIAATFADRPYPGG 313 (451)
T ss_pred HHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCee--eechhhhcCCcCcEE-EEEcH-HHHHHhccCCCCCC
Confidence 999999999999999999984 3222211 22345866 579999952112454 54554 576665421 111
Q ss_pred cCCCCChHHHHHHHhchhhHHH--HHHHHHHHH-HHHHHHHhC
Q 019543 184 EGSGLAPFDCWICLRGVKTMAL--RVEKQQDNA-QKIAEFLAS 223 (339)
Q Consensus 184 ~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a-~~l~~~L~~ 223 (339)
.+..-+|..+++++..|+.+.. ..++.++.. +++.+.|+.
T Consensus 314 ~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~ 356 (451)
T PRK06062 314 LTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRE 356 (451)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 2344578888887777776632 233333332 344444543
No 325
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.03 E-value=6.8e-09 Score=98.90 Aligned_cols=173 Identities=18% Similarity=0.123 Sum_probs=114.5
Q ss_pred CcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-HhcC-CCCEEEEcCC--------CccchH---------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HLLG-TGEEIVAGDD--------LYGGTD--------- 107 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~ll~-~GD~Vi~~~~--------~y~~~~--------- 107 (339)
-.|. ++|++.+||+..++++|.+.++.+.+|..|...+. .+++ |||++++... .|..+.
T Consensus 68 D~Y~--gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~ 145 (467)
T TIGR02617 68 EAYS--GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCT 145 (467)
T ss_pred cccc--cCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchHHHHHcCce
Confidence 3466 88999999999999999999999999998887654 4677 6887774331 122110
Q ss_pred ----------------------------HHHH-----------------------------HHHHHHHHHcCCEEEEeCC
Q 019543 108 ----------------------------RLLS-----------------------------RKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 108 ----------------------------~~~~-----------------------------~~I~~la~~~g~~livD~a 130 (339)
..++ +++.++|++||++++.|.|
T Consensus 146 ~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgA 225 (467)
T TIGR02617 146 ARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSA 225 (467)
T ss_pred eecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhH
Confidence 0000 9999999999999999986
Q ss_pred cC---C--------CCCcCc---c----cCCCeEEEeccccccccCCCceEEEEEEcCh---hHHHHHHHHHHh-cC---
Q 019543 131 IM---S--------PVLSRP---L----ELGADIVMHSATKFIAGHSDVMAGVLAVKGE---RLAKELYFLQNA-EG--- 185 (339)
Q Consensus 131 ~a---~--------g~~~~~---~----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~---~l~~~l~~~~~~-~~--- 185 (339)
-- . +..... + ...+|.+..|++|-++. .+||+++++++ ++.++++.+.-. .|
T Consensus 226 Rl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgA---pvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~t 302 (467)
T TIGR02617 226 RFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMV---PMGGLLCFKDDSFFDVYTECRTLCVVQEGFPT 302 (467)
T ss_pred HHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCC---cccceEEecchhHHHHHHHHHhhcccccCCcC
Confidence 41 1 111111 1 14689999999999985 36899999988 555555543221 12
Q ss_pred -CCCChHHHHHHHhchhhH--HHHHHHHHHHHHHHHHHHhCC
Q 019543 186 -SGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 186 -~~~~~~~a~~~~~~l~~~--~~r~~~~~~~a~~l~~~L~~~ 224 (339)
.+|+-.+...+..+|+.. ...+..+-...++|.+.|.+.
T Consensus 303 YGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~ 344 (467)
T TIGR02617 303 YGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEI 344 (467)
T ss_pred cCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhC
Confidence 255554433333445432 334555556677888888764
No 326
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.00 E-value=3.4e-08 Score=96.05 Aligned_cols=107 Identities=18% Similarity=0.178 Sum_probs=69.1
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCC-C--C--cCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH--Hh-
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSP-V--L--SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NA- 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g-~--~--~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~--~~- 183 (339)
++|.++|++||+++|+||++... . . ..-.....|++ +++|.+++. .-.|.+++++ ++.+.+.... ..
T Consensus 224 ~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDiv--t~gK~lggG--~Pi~av~~~~-~i~~~~~~~~~~~~~ 298 (428)
T PRK12389 224 EAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDLT--ALGKIIGGG--LPIGAYGGRK-DIMEQVAPLGPAYQA 298 (428)
T ss_pred HHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCee--eechhhcCC--CceeEEeEHH-HHHhhhccCCCcccc
Confidence 89999999999999999998521 1 1 11122345875 679999863 3334556654 6766654211 12
Q ss_pred cCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhC
Q 019543 184 EGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 184 ~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~ 223 (339)
.+...+|+.+++++..|+.+. ...++.++..+++.+.|++
T Consensus 299 ~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~ 340 (428)
T PRK12389 299 GTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILE 340 (428)
T ss_pred cCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 234678888888877777663 3455666677777777764
No 327
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.00 E-value=4.7e-08 Score=96.86 Aligned_cols=120 Identities=22% Similarity=0.243 Sum_probs=79.3
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcCc-----c-c-CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh-
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSRP-----L-E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA- 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~~-----~-~-~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~- 183 (339)
++|+++|++||+++.||.|++.+....+ + . .++|.++.|.+|++.+|-+ .|+++.+++.+.+.+.....+
T Consensus 285 ~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g--~G~llvr~~~~~~~~~~~~~Yl 362 (522)
T TIGR03799 285 DEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMG--AGMVLFKDPALMSAIEHHAEYI 362 (522)
T ss_pred HHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcc--cEEEEEeCHHHHHHhccCcchh
Confidence 9999999999999999999986543221 1 2 2689999999999987643 577777765554433221001
Q ss_pred -------------cCCCCC-hHHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHhCCCCceEEecC
Q 019543 184 -------------EGSGLA-PFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 233 (339)
Q Consensus 184 -------------~~~~~~-~~~a~~~~~~l--~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p 233 (339)
.++... .+..|.+++.+ +.+....++..+.++++.+.|++.|+++.+.-|
T Consensus 363 ~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p 428 (522)
T TIGR03799 363 LRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEP 428 (522)
T ss_pred cCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC
Confidence 011111 11233333333 346777788889999999999999988766544
No 328
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.99 E-value=8.9e-09 Score=97.34 Aligned_cols=160 Identities=21% Similarity=0.265 Sum_probs=103.6
Q ss_pred HHHHHHhHhCC-CeEEEcCcHHHHHHHHHHh---cCCCCEEEEcCCCccchHHHHH------------------------
Q 019543 60 LESLLAKLDKA-DRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTDRLLS------------------------ 111 (339)
Q Consensus 60 le~~la~~~g~-~~~l~~~sG~~A~~~il~l---l~~GD~Vi~~~~~y~~~~~~~~------------------------ 111 (339)
+-+.+.+.++. |..-+++|||.|.+..++| ...-|.|+.-.-.|+|....+-
T Consensus 98 ~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~ 177 (432)
T COG0001 98 LAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAK 177 (432)
T ss_pred HHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhc
Confidence 33445555555 7888999999999865544 4456888877777766431110
Q ss_pred ----------------------------------------------HHHHHHHHHcCCEEEEeCCcCC-CCC----cCcc
Q 019543 112 ----------------------------------------------RKIAEMAHAHGALLLVDNSIMS-PVL----SRPL 140 (339)
Q Consensus 112 ----------------------------------------------~~I~~la~~~g~~livD~a~a~-g~~----~~~~ 140 (339)
++|.++|++||+.||.||++.. -+. +...
T Consensus 178 ~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~ 257 (432)
T COG0001 178 HTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYY 257 (432)
T ss_pred cEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccccc
Confidence 9999999999999999999831 111 1122
Q ss_pred cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhc-C--CCCChHHHHHHHhchhhHHH---HHHHHHHHH
Q 019543 141 ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-G--SGLAPFDCWICLRGVKTMAL---RVEKQQDNA 214 (339)
Q Consensus 141 ~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~-~--~~~~~~~a~~~~~~l~~~~~---r~~~~~~~a 214 (339)
....|+. ++.|.+||. .-.|++.++ +++.+.+......+ . ..-+|...+++...|+.+.. -.++..+..
T Consensus 258 gi~PDlt--tlGKiIGGG--lP~ga~gGr-~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~ 332 (432)
T COG0001 258 GVEPDLT--TLGKIIGGG--LPIGAFGGR-AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALG 332 (432)
T ss_pred CcCcchh--hhhhhhcCC--cceeeeccH-HHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 2344654 479999953 556777766 46777655443333 2 23356666666666665543 467777778
Q ss_pred HHHHHHHhCC
Q 019543 215 QKIAEFLASH 224 (339)
Q Consensus 215 ~~l~~~L~~~ 224 (339)
++|++.|++.
T Consensus 333 ~~L~~gl~~~ 342 (432)
T COG0001 333 ERLAEGLRAA 342 (432)
T ss_pred HHHHHHHHHH
Confidence 8888877753
No 329
>PRK07482 hypothetical protein; Provisional
Probab=98.99 E-value=7.1e-08 Score=94.58 Aligned_cols=146 Identities=14% Similarity=0.112 Sum_probs=85.1
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-----
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----- 180 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~----- 180 (339)
++|.++|++||+++|+||++. .|-.+. ......|+++ ++|.++|.-..+++ +++++ ++.+.+...
T Consensus 244 ~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~~Pi~a-v~~~~-~i~~~~~~~~~~~~ 319 (461)
T PRK07482 244 PAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLIT--VAKGLTSAYAPLSG-SIVGE-KVWDVLEQGSDEHG 319 (461)
T ss_pred HHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEE--EccccccCccccce-eeecH-HHHHHHhcccccCC
Confidence 999999999999999999973 332222 1233458888 59999853112444 44543 565555321
Q ss_pred --HHhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHh----CCCCceEEecCCCCCCCchHhHhhhcCCCc
Q 019543 181 --QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAG 252 (339)
Q Consensus 181 --~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~----~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~ 252 (339)
....+..-+|+.+++++..|+.+.+ ..++.++..+++.+.|+ .++.|.. .+|.|
T Consensus 320 ~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~------------------vrG~G 381 (461)
T PRK07482 320 AIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGE------------------VRGVG 381 (461)
T ss_pred ccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEE------------------Eeece
Confidence 0112345678888888777776533 23444455566666654 3333222 24567
Q ss_pred ceEEEeeCC-H----------HHHHHHHccCCcceeec
Q 019543 253 SVLSFLTGS-L----------ALSKHVVETTKYFSITV 279 (339)
Q Consensus 253 ~ivs~~~~~-~----------~~~~~~~~~L~~~~i~v 279 (339)
.++.+++.. . ..+.++...+...|+.+
T Consensus 382 lm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~ 419 (461)
T PRK07482 382 MLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIA 419 (461)
T ss_pred eEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEE
Confidence 888888732 1 11345666665656543
No 330
>PRK07481 hypothetical protein; Provisional
Probab=98.98 E-value=5.1e-08 Score=95.30 Aligned_cols=177 Identities=19% Similarity=0.202 Sum_probs=103.5
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-----
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----- 180 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~----- 180 (339)
++|.++|++||+++|.||++. .|-.+. ......||++ ++|.+++.-..+ |.+++++ ++.+.+..-
T Consensus 237 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~gG~~Pi-~av~~~~-~i~~~~~~~~~~~~ 312 (449)
T PRK07481 237 PLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMC--LAKGITSGYVPL-GATMVNA-RIADAFEANADFGG 312 (449)
T ss_pred HHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEE--EeecccCCCcCc-eEEEEcH-HHHHHHhccCcccc
Confidence 899999999999999999973 332221 1223458776 599998521123 4555654 566655421
Q ss_pred --HHhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCc
Q 019543 181 --QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAG 252 (339)
Q Consensus 181 --~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~ 252 (339)
....+..-+|+.+++++..|+.+.+ ..++.++..+++.+.|+++ +.+.. .+|.|
T Consensus 313 ~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrG~G 374 (449)
T PRK07481 313 AIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGD------------------VRGKG 374 (449)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEE------------------Eeecc
Confidence 1111234578887777777776532 3445555566666666543 22211 24577
Q ss_pred ceEEEeeC-C----------HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe---
Q 019543 253 SVLSFLTG-S----------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--- 318 (339)
Q Consensus 253 ~ivs~~~~-~----------~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv--- 318 (339)
.++.+.+. + ...+..+.+.+...|+.+... ...+||+.
T Consensus 375 lm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----------------------------g~~i~l~Ppl~ 426 (449)
T PRK07481 375 LMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS----------------------------GTKIILSPPLV 426 (449)
T ss_pred eEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec----------------------------CCEEEEECCCC
Confidence 88888762 2 112345655555555543211 12467774
Q ss_pred -ccCCHHHHHHHHHHHHhcCC
Q 019543 319 -GIEDVNDLISDLDKALRTGP 338 (339)
Q Consensus 319 -g~e~~~~li~~l~~al~~~~ 338 (339)
+.++.+.+++.|.++|++++
T Consensus 427 it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 427 IQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred CCHHHHHHHHHHHHHHHHhcc
Confidence 44666777777778877665
No 331
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.98 E-value=4.8e-08 Score=95.55 Aligned_cols=148 Identities=13% Similarity=0.167 Sum_probs=87.6
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-----
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----- 180 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~----- 180 (339)
++|.++|++||+++|.||++ +.|-.+. ......||++. +|.++|. -.-.|.+++++ ++.+.+..-
T Consensus 246 ~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~--gKgl~gG-~~Pi~av~~~~-ei~~~~~~~~~~~~ 321 (453)
T PRK06943 246 RGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCL--SKGISGG-YLPLSLVLSRD-AIFAAFYDDDVTRG 321 (453)
T ss_pred HHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEee--ehhhccC-cccceEEEEcH-HHHHhhcccCccCC
Confidence 99999999999999999997 3433222 12334688874 8999953 12245555654 566555321
Q ss_pred -HHhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEE
Q 019543 181 -QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 257 (339)
Q Consensus 181 -~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~ 257 (339)
....+..-+|+.+++++..|+.+.+ ..++.++..+++.+.|+++. .+|.+. ..+|.|.++.+
T Consensus 322 ~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-----~~~~v~----------~vrG~Gl~~gv 386 (453)
T PRK06943 322 FLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLA-----AHPQVR----------HLRQRGTIFAF 386 (453)
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-----cCCCEE----------eEeccccEEEE
Confidence 0112334578888777777776633 24555556667777766531 122211 02467888888
Q ss_pred eeC-CH----HHHHHHHccCCcceee
Q 019543 258 LTG-SL----ALSKHVVETTKYFSIT 278 (339)
Q Consensus 258 ~~~-~~----~~~~~~~~~L~~~~i~ 278 (339)
++. +. ..+.++.+.+...|+.
T Consensus 387 el~~~~~~~~~~~~~i~~~~~~~Gll 412 (453)
T PRK06943 387 DVALDGDAARTFSRRFFEAALERELL 412 (453)
T ss_pred EEccCCCcchHHHHHHHHHHHHCCcE
Confidence 874 22 1245566666555554
No 332
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.98 E-value=1.2e-07 Score=92.49 Aligned_cols=175 Identities=19% Similarity=0.211 Sum_probs=103.1
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHH-HH---
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-LQ--- 181 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~-~~--- 181 (339)
++|.++|++||+++|.||++ +.|-.+.. .....|+++ ++|.+. .+|+++++ ++.+.... +.
T Consensus 249 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~-----~~a~l~~~--~i~~~~~~~~~~~~ 319 (443)
T PRK08297 249 AAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA--FGKKTQ-----VCGIMAGR--RVDEVEDNVFAVSS 319 (443)
T ss_pred HHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEE--eccccc-----ccceecch--HHHHhhhhhccCcc
Confidence 89999999999999999998 44433221 223468886 699984 25566543 23222211 10
Q ss_pred Hhc-CCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEe
Q 019543 182 NAE-GSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 258 (339)
Q Consensus 182 ~~~-~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~ 258 (339)
... +..-+|+.+++++..|+.+. ...++.++..+++.+.|+++.. .+|.... ..+|.|.++.|+
T Consensus 320 ~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~~~---------~vrg~G~~~~i~ 386 (443)
T PRK08297 320 RINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAA----EFPAVVS---------NVRGRGLMCAFD 386 (443)
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----HCCCcce---------eeeccceEEEEE
Confidence 122 33467887777777776553 2345555666666666654310 0121100 024578899999
Q ss_pred eCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 259 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 259 ~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+.+......|.+.+...|+.+. |. ....+||+..+..+++.|+.+.++|+
T Consensus 387 ~~~~~~~~~~~~~l~~~Gvl~~----------~~-----------------~~~~lr~~P~l~~t~~eid~~l~~l~ 436 (443)
T PRK08297 387 LPTTADRDEVIRRLWEEGVLVL----------PC-----------------GERSIRFRPALTVTTEEIDAAIDALR 436 (443)
T ss_pred ecCHHHHHHHHHHHHHCCEEEe----------cC-----------------CCCeEEEECCccCCHHHHHHHHHHHH
Confidence 8766556678877766666542 10 12468998777666665555555554
No 333
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.97 E-value=1.1e-08 Score=100.37 Aligned_cols=107 Identities=13% Similarity=0.138 Sum_probs=67.6
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcC------cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH-hc
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSR------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AE 184 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~------~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~-~~ 184 (339)
++|.++|++||+++|+||++ +|.... -.....|++ +++|.++|. -.+| .++++ +++.+.+..... ..
T Consensus 270 ~~lr~lc~~~g~lLI~DEV~-tGfR~g~~ga~~~~gv~PDi~--t~gK~lggG-~Pig-av~g~-~ei~~~~~~~~~~~~ 343 (474)
T PLN02482 270 EGLREITKENGALLVFDEVM-TGFRIAYGGAQEYFGITPDLT--TLGKVIGGG-LPVG-AYGGR-REIMEMVAPAGPMYQ 343 (474)
T ss_pred HHHHHHHHHcCCEEEEeccc-cCeecCcchHhHHhCCCCCEE--EecchhhCC-CceE-EEEEc-HHHHHhhccCCCccc
Confidence 78999999999999999998 454211 112235774 679999853 2344 45665 467776642111 12
Q ss_pred --CCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCC
Q 019543 185 --GSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 185 --~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~ 224 (339)
+..-+|..+++++..|+.+. ...++.+++.+++.+.|++.
T Consensus 344 ~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l 387 (474)
T PLN02482 344 AGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEA 387 (474)
T ss_pred ccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 22346776666666666653 34566667777787777653
No 334
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.96 E-value=1.1e-07 Score=92.62 Aligned_cols=176 Identities=18% Similarity=0.201 Sum_probs=107.7
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHH-H---H
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-L---Q 181 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~-~---~ 181 (339)
++|.++|++||+++|+||++. .|..+.. .....|+++ ++|.+. .+|++... .+.+.... + .
T Consensus 242 ~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~--~gK~~~-----~~g~~~~~--~i~~~~~~~~~~~~ 312 (431)
T TIGR03251 242 RAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA--FGKKTQ-----VCGIMAGR--RVDEVADNVFAVPS 312 (431)
T ss_pred HHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEE--ecccCc-----cceEEecc--hHHHhhhhcccCcc
Confidence 999999999999999999985 4433221 233568886 688862 35666543 22221111 1 0
Q ss_pred Hh-cCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEe
Q 019543 182 NA-EGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 258 (339)
Q Consensus 182 ~~-~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~ 258 (339)
.. .+...+|..++++...|+.+.. ..++.++..+++.+.|++... .+|.+..+ .++.|.++.++
T Consensus 313 ~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~i~~---------vrg~G~~~~i~ 379 (431)
T TIGR03251 313 RLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAA----EFPHLVSN---------PRGRGLMCAFD 379 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----hCccceec---------ccccceeEEEE
Confidence 12 2234577777777766766532 234445555666665554210 11211110 14578888999
Q ss_pred eCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 259 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 259 ~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+.+.+....+.+.|...|+.+. |. ..+.+||++.+..+++.|+.+.++|++
T Consensus 380 ~~~~~~~~~~~~~l~~~Gvl~~----------~~-----------------g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 380 LPSTADRDEVIRQLYREGVLLL----------GC-----------------GERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred eCCHHHHHHHHHHHHhCCeEEe----------cC-----------------CCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 8766556678887777676542 10 125699999999999999999988875
No 335
>PRK07036 hypothetical protein; Provisional
Probab=98.96 E-value=8.4e-08 Score=94.16 Aligned_cols=129 Identities=16% Similarity=0.149 Sum_probs=78.7
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcC------cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH----
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSR------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL---- 180 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~------~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~---- 180 (339)
++|.++|++||+++|+||++ +.|-.+. -.....||++ ++|.+++. -.-.|.+++++ ++.+.+...
T Consensus 244 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt--~gK~l~gG-~~Pi~av~~~~-~i~~~~~~~~~~~ 319 (466)
T PRK07036 244 ARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIIT--FAKGLTSG-YQPLGAVIISE-RLLDVISGPNAKG 319 (466)
T ss_pred HHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEE--EccccccC-ccccEEEEEcH-HHHHHHhcccCcC
Confidence 99999999999999999998 4443221 1233458765 69999852 11234555654 676655421
Q ss_pred ---HHhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceE
Q 019543 181 ---QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 255 (339)
Q Consensus 181 ---~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~iv 255 (339)
....+..-+|+.+++++..|+.+.+ ..++.++..+++.+.|+.+. .+|.. . ..+|.|.++
T Consensus 320 ~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~-----~~~~v-~---------~vrG~Gl~~ 384 (466)
T PRK07036 320 NVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLR-----ELPLV-G---------DVRGDHLMA 384 (466)
T ss_pred cccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhc-----cCCCE-E---------EEEeeceEE
Confidence 1112345578888888777776632 35555666677777775431 12211 0 024678888
Q ss_pred EEee
Q 019543 256 SFLT 259 (339)
Q Consensus 256 s~~~ 259 (339)
.|++
T Consensus 385 ~ve~ 388 (466)
T PRK07036 385 CVEC 388 (466)
T ss_pred EEEE
Confidence 8887
No 336
>PRK06917 hypothetical protein; Provisional
Probab=98.96 E-value=1.9e-07 Score=91.30 Aligned_cols=146 Identities=12% Similarity=0.123 Sum_probs=87.3
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH--h
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--A 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~ 183 (339)
++|.++|++||+++|+||++. .|-.+.. .....|++ +++|.+++. -.-.|++++++ ++.+.+..... .
T Consensus 224 ~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~--~~gK~l~~G-~~Pi~a~~~~~-~i~~~~~~~~~~~~ 299 (447)
T PRK06917 224 KVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIM--TLGKGLGAG-YTPIAATVVSD-RVMEPILRGSRSIM 299 (447)
T ss_pred HHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEE--EeeehhccC-CcceEEEEEcH-HHHHHHhccCcccc
Confidence 899999999999999999984 2222211 22245875 469999852 11245666654 66665542111 1
Q ss_pred c--CCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceE
Q 019543 184 E--GSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 255 (339)
Q Consensus 184 ~--~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~iv 255 (339)
. +..-+|+.+++++..|+.+.+ ..++.++..+++.+.|+.+ +.+.. .+|.|.++
T Consensus 300 ~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrG~Gl~~ 361 (447)
T PRK06917 300 SGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGD------------------VRGKGLLI 361 (447)
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEEE------------------EeecceEE
Confidence 2 344578887777777776532 3455556666666666543 22221 24577888
Q ss_pred EEeeC-C----------HHHHHHHHccCCcceeec
Q 019543 256 SFLTG-S----------LALSKHVVETTKYFSITV 279 (339)
Q Consensus 256 s~~~~-~----------~~~~~~~~~~L~~~~i~v 279 (339)
.|++. + .+.+..+.+.+...|+.+
T Consensus 362 ~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~ 396 (447)
T PRK06917 362 GVEFVADKKTKQPFSKSQAVASELISVAAKNGLLL 396 (447)
T ss_pred EEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEE
Confidence 88762 1 122456776666666654
No 337
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.96 E-value=1.2e-08 Score=103.14 Aligned_cols=172 Identities=16% Similarity=0.135 Sum_probs=109.7
Q ss_pred chHHHHHHHHHhHhCCCeEEEcCcH-HHHHHH-HHHhcCCCCEEEEcCCC----ccc-hH--------------------
Q 019543 55 PTRDALESLLAKLDKADRALCFTSG-MAALAA-VTHLLGTGEEIVAGDDL----YGG-TD-------------------- 107 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~sG-~~A~~~-il~ll~~GD~Vi~~~~~----y~~-~~-------------------- 107 (339)
....+.|+..|++||++++..+.+| +.+|.+ ++++++|||.|+++++. |++ ..
T Consensus 174 G~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~g 253 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIG 253 (720)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCcC
Confidence 4578999999999999999988888 567765 56699999999999874 332 11
Q ss_pred ----HH-----------------------HH----------------HHHHHH-HHHcCCEEEEeCCcCCCCCcCc----
Q 019543 108 ----RL-----------------------LS----------------RKIAEM-AHAHGALLLVDNSIMSPVLSRP---- 139 (339)
Q Consensus 108 ----~~-----------------------~~----------------~~I~~l-a~~~g~~livD~a~a~g~~~~~---- 139 (339)
.- ++ ++|+++ +++++ +|++|+||+....+.+
T Consensus 254 ~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~ 332 (720)
T PRK13578 254 GIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMAD 332 (720)
T ss_pred CCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhhhccCccccc
Confidence 00 11 888888 78888 9999999976432211
Q ss_pred -----ccCCCe----EEEeccccccccCCCceEEEEEEcChhH--------HHHHHHHHHhcC-CCCC-hHHHHH--HHh
Q 019543 140 -----LELGAD----IVMHSATKFIAGHSDVMAGVLAVKGERL--------AKELYFLQNAEG-SGLA-PFDCWI--CLR 198 (339)
Q Consensus 140 -----~~~~~D----i~~~S~sK~l~g~~~~~gG~v~~~~~~l--------~~~l~~~~~~~~-~~~~-~~~a~~--~~~ 198 (339)
+..|+| +++.|.+|.+++. .++.+|..++..+ .+++...-.++. ++.+ ++.|.+ +.+
T Consensus 333 ~p~~al~~GaD~p~i~v~QStHKtL~al--TQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~LmASLDva~~ 410 (720)
T PRK13578 333 CSPLLLELNENDPGIFVTQSVHKQQAGF--SQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLFAALDVNAK 410 (720)
T ss_pred CChhhhhcCCCCCCeEEEEChhhcchhh--hhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 356889 9999999999965 5677787755321 134544433443 3222 122211 111
Q ss_pred chhh--HHHHHHHHHHHHHHHHHHH-hCCCCceE
Q 019543 199 GVKT--MALRVEKQQDNAQKIAEFL-ASHPRVKK 229 (339)
Q Consensus 199 ~l~~--~~~r~~~~~~~a~~l~~~L-~~~~~i~~ 229 (339)
.++. -....++..+.+..+++.+ +..++++.
T Consensus 411 ~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~ 444 (720)
T PRK13578 411 MHEGESGRRLWMECVKLGIEARKLILARCKLIRP 444 (720)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence 1221 1233445556667777776 66666543
No 338
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.95 E-value=3e-08 Score=97.15 Aligned_cols=180 Identities=12% Similarity=0.172 Sum_probs=103.3
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHH------
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF------ 179 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~------ 179 (339)
++|.++|++||+++|.||++. .|-.+.. .....||++ ++|.++|.-..+ |.+++++ ++.+.+..
T Consensus 248 ~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~--~gK~l~gG~~Pi-~av~~~~-ei~~~~~~~~~~~~ 323 (460)
T PRK06916 248 KGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMT--AGKGLTGGYLPI-AITVTTD-EIYNAFYGDYEEQK 323 (460)
T ss_pred HHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeee--eehhhhcCcccc-ceeeecH-HHHHHhhccccccC
Confidence 999999999999999999972 3222211 223458775 699998531123 4555554 56554431
Q ss_pred -HHHhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEE
Q 019543 180 -LQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 256 (339)
Q Consensus 180 -~~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs 256 (339)
.....+..-+|+.+++++..|+.+.+ ..++.++..+++.+.|+.+.. +|.+. ..+|.|.++.
T Consensus 324 ~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~-----~~~v~----------~vrG~Glm~g 388 (460)
T PRK06916 324 TFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFA-----LKHVG----------DIRQLGLMVG 388 (460)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-----CCCeE----------EeecCCceee
Confidence 01111334578887777777776532 355566667777777765421 22110 0246778888
Q ss_pred EeeCCH-----------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEec----cC
Q 019543 257 FLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IE 321 (339)
Q Consensus 257 ~~~~~~-----------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg----~e 321 (339)
+++.+. ....++...+...|+.+. | ..+.+|+... -+
T Consensus 389 iel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~----------~------------------~g~~l~~~Ppl~it~~ 440 (460)
T PRK06916 389 IELVKNKETKEPFEWTERVGVQVCKRSRELGMLTR----------P------------------LGNTIVFMPPLASTID 440 (460)
T ss_pred EEeecccccccCCCchhhHHHHHHHHHHHCCeEEE----------e------------------cCCEEEEeCCcccCHH
Confidence 876321 112456666655565432 1 1145777744 45
Q ss_pred CHHHHHHHHHHHHhcCC
Q 019543 322 DVNDLISDLDKALRTGP 338 (339)
Q Consensus 322 ~~~~li~~l~~al~~~~ 338 (339)
+.+..++.|.++|++++
T Consensus 441 ~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 441 ELDEMLRILYKAISDVT 457 (460)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 55566666666666554
No 339
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.95 E-value=7.7e-09 Score=96.72 Aligned_cols=152 Identities=24% Similarity=0.288 Sum_probs=100.8
Q ss_pred cccCCCCc---hHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCC-Cc-cch---HHHHH--------
Q 019543 48 DYTRSGNP---TRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDD-LY-GGT---DRLLS-------- 111 (339)
Q Consensus 48 ~y~r~~~~---~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~-~y-~~~---~~~~~-------- 111 (339)
.|++..+. ....+.+.+..+.|++.+.++++..+|+..++..+.++-+|+++.- .- ++. ...++
T Consensus 58 e~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~E 137 (395)
T COG1921 58 ETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVE 137 (395)
T ss_pred eeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEccccccCCCCChhHHHHHcCCEEEE
Confidence 45554332 2336666677777889999999999999865553344556665532 11 111 11111
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-----cCcccCCCeEE
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIV 147 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~-----~~~~~~~~Di~ 147 (339)
++++++||+||+++++|.+.+..+. ...+..|+|++
T Consensus 138 vG~tn~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV 217 (395)
T COG1921 138 VGTTNRTHLKDYELAINENTALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLV 217 (395)
T ss_pred ecccCcCCHHHHHHHhccCCeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEE
Confidence 8899999999999999999866533 12346799999
Q ss_pred EeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH
Q 019543 148 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM 203 (339)
Q Consensus 148 ~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~ 203 (339)
++|..|.|+|| .+|.|++++ ++++++++..-..+....+..-+.....|+.+
T Consensus 218 ~~SgdKllgGP---qaGii~GkK-elI~~lq~~~l~Ralrv~K~tla~l~~aLe~y 269 (395)
T COG1921 218 SFSGDKLLGGP---QAGIIVGKK-ELIEKLQSHPLKRALRVDKETLAALEAALELY 269 (395)
T ss_pred EEecchhcCCC---ccceEechH-HHHHHHHhhhhhhhhhcCcHhHHHHHHHHHHH
Confidence 99999999986 479999875 79888876543344555554444444444443
No 340
>PRK06148 hypothetical protein; Provisional
Probab=98.94 E-value=9.3e-08 Score=101.94 Aligned_cols=176 Identities=15% Similarity=0.114 Sum_probs=106.3
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcC------cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH-Hh
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSR------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NA 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~------~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-~~ 183 (339)
++|.++|++||+++|.||++ +.|-.+. ......||++ ++|.+|+. .-.|.+++++ ++.+.+..-. ..
T Consensus 808 ~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt--~gK~lggG--~Plgav~~~~-ei~~~~~~g~~~~ 882 (1013)
T PRK06148 808 REVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVT--MGKPIGNG--HPMGAVVTTR-EIADSFDNGMEYF 882 (1013)
T ss_pred HHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceee--ecccccCC--cceEEEEEcH-HHHhhccCCCccc
Confidence 99999999999999999998 4443222 1223458865 59999863 3345565653 6666543211 11
Q ss_pred cCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEE
Q 019543 184 EGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 257 (339)
Q Consensus 184 ~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~ 257 (339)
.+..-+|+.+++++..|+.+.+ ..++.++..+++.+.|+++ +.|.. .+|.|.++.+
T Consensus 883 ~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~------------------VrG~Gl~~gv 944 (1013)
T PRK06148 883 NTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGD------------------VRGMGLFLGI 944 (1013)
T ss_pred cCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceE------------------EeeeceEEEE
Confidence 2345578888888777776632 2344455566666666543 22221 2457788888
Q ss_pred eeCC--------HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHH
Q 019543 258 LTGS--------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISD 329 (339)
Q Consensus 258 ~~~~--------~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~ 329 (339)
++.. .+.+..+.+.+...|+.+...+ ...+.|||..-+..+++.|+.
T Consensus 945 el~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-------------------------~~~~vlr~~Ppl~it~~~id~ 999 (1013)
T PRK06148 945 ELVTDRKTKAPATAIARYVKNGARERGILIGTEG-------------------------PHDNVLKIRPPLIFSRADADH 999 (1013)
T ss_pred EecCCccccCccHHHHHHHHHHHHhCCeEEeccC-------------------------CCCCEEEEeCCccCCHHHHHH
Confidence 7632 1235567777777776543211 123678888877666665555
Q ss_pred HHHHHh
Q 019543 330 LDKALR 335 (339)
Q Consensus 330 l~~al~ 335 (339)
+.++|+
T Consensus 1000 ~l~~l~ 1005 (1013)
T PRK06148 1000 LLEVLD 1005 (1013)
T ss_pred HHHHHH
Confidence 555543
No 341
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=98.94 E-value=7.3e-08 Score=91.67 Aligned_cols=239 Identities=15% Similarity=0.131 Sum_probs=140.1
Q ss_pred chHHHHHHHHHhHhCCC---eE-EEcCcHHHHHHH-HHHhc-CCCCEEEEcCCCccch-H-HHHH---------------
Q 019543 55 PTRDALESLLAKLDKAD---RA-LCFTSGMAALAA-VTHLL-GTGEEIVAGDDLYGGT-D-RLLS--------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~-l~~~sG~~A~~~-il~ll-~~GD~Vi~~~~~y~~~-~-~~~~--------------- 111 (339)
...++.++.|.++++.+ .+ ++..||+.++.+ +.+++ ++||.|++.. .|+.- . .+.+
T Consensus 39 ~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~~g 117 (374)
T TIGR01365 39 EKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEAEYG 117 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcCCCC
Confidence 45677889999999853 24 457788999975 55688 5899888754 33221 1 1111
Q ss_pred --------------------------HHHHHHHHH-cCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEE
Q 019543 112 --------------------------RKIAEMAHA-HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAG 164 (339)
Q Consensus 112 --------------------------~~I~~la~~-~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG 164 (339)
--+.+++++ +++++|||.+.+.|...-... ++|++++|..|+|+++++ -+
T Consensus 118 ~~~~~~~ve~~~~v~~vhnETSTGv~npv~~i~~~~~~~lliVDavSs~g~~~l~~d-~iDv~~tgsQK~L~~ppG--ls 194 (374)
T TIGR01365 118 KLPDLKKVDFKNDVVFTWNGTTSGVRVPNGDFIPADREGLTICDATSAAFAQDLDYH-KLDVVTFSWQKVLGGEGA--HG 194 (374)
T ss_pred CCCCHHHcCCCCCEEEecCCCchheeccccccccccCCCcEEEEccchhcCCCCChh-HCcEEEEechhccCCCCc--eE
Confidence 223344444 589999999987775321222 589999999999998864 46
Q ss_pred EEEEcChhHHHHHHH---------HH----------Hhc-C--CCCChHHH-HHHHhch----h--hHHHHHHHHHHHHH
Q 019543 165 VLAVKGERLAKELYF---------LQ----------NAE-G--SGLAPFDC-WICLRGV----K--TMALRVEKQQDNAQ 215 (339)
Q Consensus 165 ~v~~~~~~l~~~l~~---------~~----------~~~-~--~~~~~~~a-~~~~~~l----~--~~~~r~~~~~~~a~ 215 (339)
+++.+++ .+++... +. +.. + ...++..+ +.+...| + -++.+.++++++++
T Consensus 195 ~v~vs~~-Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~ 273 (374)
T TIGR01365 195 MLILSPR-AVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLA 273 (374)
T ss_pred EEEECHH-HHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 7777754 4444331 10 001 1 12233322 2222333 2 27788999999999
Q ss_pred HHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCCHH------H-----HHHHHccCCcceeecccCC
Q 019543 216 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLA------L-----SKHVVETTKYFSITVSFGS 283 (339)
Q Consensus 216 ~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~~------~-----~~~~~~~L~~~~i~v~~G~ 283 (339)
.+++++++.+.+.. ++ .++.+ .++ ++.|.+.+.. . ..+|.+.|+..|+.+..|.
T Consensus 274 ~l~~~l~~lg~l~~--~~---~~~~~---------rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~ 339 (374)
T TIGR01365 274 VLEAFVAKNNWIHF--LA---ETPEI---------RSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGS 339 (374)
T ss_pred HHHHHHHHCCCccc--CC---CChhh---------cCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccc
Confidence 99999998864321 11 11110 233 4445552221 1 4677777877777654332
Q ss_pred cccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 284 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 284 ~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
. + ..+..+||+-..+-.++.++.|..+|+
T Consensus 340 ~------~-----------------~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 340 Y------R-----------------DAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred c------c-----------------cCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 1 1 123679999876555555555655553
No 342
>PRK07480 putative aminotransferase; Validated
Probab=98.93 E-value=5.8e-08 Score=95.07 Aligned_cols=129 Identities=16% Similarity=0.144 Sum_probs=76.6
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHH----HH
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF----LQ 181 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~----~~ 181 (339)
++|.++|++||+++|+||++ +.|-.+.. .....|+++ ++|.++|.--.++ .+++++ ++.+.+.. +.
T Consensus 243 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG~~Pi~-av~~~~-~i~~~~~~~~~~~~ 318 (456)
T PRK07480 243 PEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT--IAKGLTSGYIPMG-AVGVGD-RVAEVLIEEGGEFN 318 (456)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeee--eehhhccCCccce-EEEEcH-HHHHHHhcCCCCcc
Confidence 99999999999999999998 34322221 222357764 6999985211244 444553 56665531 11
Q ss_pred HhcCCCCChHHHHHHHhchhhHHH--HHHHH-HHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEe
Q 019543 182 NAEGSGLAPFDCWICLRGVKTMAL--RVEKQ-QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 258 (339)
Q Consensus 182 ~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~-~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~ 258 (339)
...+..-+|+.+++++..|+.+.+ ..++. ++..+++.+.|+.... +|... ..+|.|.++.++
T Consensus 319 ~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l~~-----~~~i~----------~vrG~Glm~gie 383 (456)
T PRK07480 319 HGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLRELAD-----HPLVG----------EVRGVGLVGAIE 383 (456)
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhc-----CCCee----------eEEeecceEEEE
Confidence 123455678888888877776643 23444 3455666666664311 22110 024577888888
Q ss_pred e
Q 019543 259 T 259 (339)
Q Consensus 259 ~ 259 (339)
+
T Consensus 384 ~ 384 (456)
T PRK07480 384 L 384 (456)
T ss_pred E
Confidence 7
No 343
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.92 E-value=5.3e-08 Score=95.09 Aligned_cols=173 Identities=13% Similarity=0.108 Sum_probs=103.1
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccC--CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~--~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~ 183 (339)
++|.++|++||+++|+||++. .|-.+.. ... ..||++ ++|.+++ ||+++.+ +.+ .........
T Consensus 275 ~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t--~gK~lg~-----gG~~~~~-~~~-~~~~~~~~~ 345 (464)
T TIGR00699 275 RKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVT--FSKKFQT-----AGYFFHD-PAF-RPNKPYRQF 345 (464)
T ss_pred HHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEE--ehhhhcc-----CCccccc-hhc-cCCCCcccc
Confidence 999999999999999999982 3222221 112 268744 6999963 2344332 211 100001111
Q ss_pred cCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhC----CC-CceEEecCCCCCCCchHhHhhhcCCCcceEE
Q 019543 184 EGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 256 (339)
Q Consensus 184 ~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~----~~-~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs 256 (339)
.+..-+|..+++++..|+.+.. ..++..+..+++.+.|++ +| .|..|.. .|.|.++.
T Consensus 346 ~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg----------------~G~Glm~g 409 (464)
T TIGR00699 346 NTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRG----------------KGRGTFIA 409 (464)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc----------------cCeEEEEE
Confidence 2334567777777766665532 233333444566666554 33 1221110 15789999
Q ss_pred EeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 257 FLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 257 ~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+++.+...+.++.+.+...|+.+... ..+.|||+..+..+++.|+.+.++|++
T Consensus 410 ie~~~~~~~~~i~~~~~~~Gvl~~~~---------------------------g~~~ir~~Ppl~it~~eid~~~~~l~~ 462 (464)
T TIGR00699 410 WDTPDEAKRDKLLKKARNNGVNIGGC---------------------------GVKAIRLRPMLVFQKHHADIFLEIISK 462 (464)
T ss_pred EecCCHHHHHHHHHHHHHCCcEEecC---------------------------CCCeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 99876655677888777767654310 236799999999988888888888865
No 344
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.87 E-value=1.9e-07 Score=91.60 Aligned_cols=124 Identities=16% Similarity=0.157 Sum_probs=74.1
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
+++.++|++||+++|.||++. .|-.+. -.....||++. +|.++|. .-.|.+++++ ++ +.+.......+
T Consensus 255 ~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~--gKglggG--~PlsAv~~~~-~~-~~~~~~~~~~T 328 (464)
T PRK06938 255 RGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVL--SKAIGGS--LPLAVVVYRE-WL-DTWQPGAHAGT 328 (464)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEe--eccccCC--CceEEEeehh-Hh-hccCCCCCCCC
Confidence 999999999999999999973 332221 12334588874 8999863 3345565654 33 32211111123
Q ss_pred CCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee
Q 019543 186 SGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 259 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~ 259 (339)
..-+|+.+++++..|+.+.+ ..++.++..+++.+.|+. +|.|.. .+|.|.++.+++
T Consensus 329 ~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~------------------VrG~Glm~gie~ 390 (464)
T PRK06938 329 FRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGD------------------VRGRGLMLGVEI 390 (464)
T ss_pred CCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeee------------------eeccceEEEEEe
Confidence 45578888877777776532 234444555666666654 332222 245778888887
No 345
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.86 E-value=1.7e-07 Score=85.91 Aligned_cols=177 Identities=24% Similarity=0.224 Sum_probs=111.2
Q ss_pred CCCcccCC--CCchHHHHHHHHH----hHhCCCe----E-EEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchH-----
Q 019543 45 GPYDYTRS--GNPTRDALESLLA----KLDKADR----A-LCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTD----- 107 (339)
Q Consensus 45 ~~~~y~r~--~~~~~~~le~~la----~~~g~~~----~-l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~----- 107 (339)
.+|...|+ +|...+++|.... +.|+.+. + +-.-||+-||+++. ++++|+|.|.--+.--+|..
T Consensus 70 EGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~ 149 (477)
T KOG2467|consen 70 EGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQ 149 (477)
T ss_pred cCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccc
Confidence 34555554 6777777775433 3455431 2 23448999998766 49999999987654222211
Q ss_pred -----------------------------H-------HHH-----------------HHHHHHHHHcCCEEEEeCCcC--
Q 019543 108 -----------------------------R-------LLS-----------------RKIAEMAHAHGALLLVDNSIM-- 132 (339)
Q Consensus 108 -----------------------------~-------~~~-----------------~~I~~la~~~g~~livD~a~a-- 132 (339)
. .++ +++.++|++.|++|+.|-+|-
T Consensus 150 T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISg 229 (477)
T KOG2467|consen 150 TPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISG 229 (477)
T ss_pred cCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHH
Confidence 0 000 899999999999999999994
Q ss_pred ---CCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcCh----------hHHHHHHHHHH---hc---CCCCChHHH
Q 019543 133 ---SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE----------RLAKELYFLQN---AE---GSGLAPFDC 193 (339)
Q Consensus 133 ---~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~----------~l~~~l~~~~~---~~---~~~~~~~~a 193 (339)
.++..+|+++ +|||+.|.+|+|-|| +||+|--++. +..-.+....+ +. |..=+...+
T Consensus 230 LVAA~vipsPFey-~DiVTTTTHKsLRGP---Rg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIa 305 (477)
T KOG2467|consen 230 LVAAGVIPSPFEY-CDIVTTTTHKSLRGP---RGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIA 305 (477)
T ss_pred HHhcccCCCcccc-cceeeccccccccCC---cceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHH
Confidence 4555677775 899999999999976 5788876531 11111222111 11 211111112
Q ss_pred H--HHHhc--hhhHHHHHHHHHHHHHHHHHHHhCCC
Q 019543 194 W--ICLRG--VKTMALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 194 ~--~~~~~--l~~~~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
+ .++.+ -..+.+..+|..+|++.+++.|....
T Consensus 306 alAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~G 341 (477)
T KOG2467|consen 306 ALAVALKQAMTPEFKEYQKQVLKNAKALASALISRG 341 (477)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2 22222 23467778888899999999998763
No 346
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.85 E-value=2.5e-07 Score=82.79 Aligned_cols=190 Identities=15% Similarity=0.155 Sum_probs=104.7
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCc----Cccc-CC-CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhc-
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLS----RPLE-LG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE- 184 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~----~~~~-~~-~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~- 184 (339)
.+|.++|++||++|++|+|++.+... +... ++ --+.|.|+||. |-|| .+.|.++++ ++++..+.++..+.
T Consensus 202 ~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~-GLPG-~R~GIiIan-e~viqaitnmn~iis 278 (417)
T COG3977 202 AKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKL-GLPG-SRCGIIIAN-EKVIQAITNMNGIIS 278 (417)
T ss_pred HHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhc-CCCC-cceeEEEcc-HHHHHHHHhccceee
Confidence 77889999999999999999876532 1111 22 24889999996 4444 678888887 47777777765433
Q ss_pred --CCCCChHHHHHHHh--chhhHHHHHHH--HHHHHHHHHHHHhC-CCCceEEecCCCCCCCchHhHhhhcCCCcceEEE
Q 019543 185 --GSGLAPFDCWICLR--GVKTMALRVEK--QQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 257 (339)
Q Consensus 185 --~~~~~~~~a~~~~~--~l~~~~~r~~~--~~~~a~~l~~~L~~-~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~ 257 (339)
...+.|..+.-++. .|..+.+.+-+ .+..++...+.|+. +|..++..+ ++.|.|+..
T Consensus 279 Lap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iH----------------kpEGAIFlW 342 (417)
T COG3977 279 LAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIH----------------KPEGAIFLW 342 (417)
T ss_pred ecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeee----------------cCCcceeeh
Confidence 24455544432221 12222222111 11222222233322 222222221 225666544
Q ss_pred e-eCCH-HHHHHHHccCCcceeecccCCcccce-eccccccCCCCCHHHHHhCCCCCCeEEEEeccCCH--HHHHHHHHH
Q 019543 258 L-TGSL-ALSKHVVETTKYFSITVSFGSVKSLI-SMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDV--NDLISDLDK 332 (339)
Q Consensus 258 ~-~~~~-~~~~~~~~~L~~~~i~v~~G~~~s~~-~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~--~~li~~l~~ 332 (339)
. +.+. -...+++++|+..|+.+-.|..+=.- ...++ =....+|+|...++. +.=+..|.+
T Consensus 343 LWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewp---------------H~hqC~Rmn~~~~~~~ie~Gva~lae 407 (417)
T COG3977 343 LWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWP---------------HTHQCMRMNYVPEPEKIEKGVAILAE 407 (417)
T ss_pred hhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCC---------------CccceEEEecCCCHHHHHHHHHHHHH
Confidence 3 4443 34578999999999988777543211 11111 134579999976653 333444544
Q ss_pred HHh
Q 019543 333 ALR 335 (339)
Q Consensus 333 al~ 335 (339)
+++
T Consensus 408 ~ve 410 (417)
T COG3977 408 EVE 410 (417)
T ss_pred HHH
Confidence 443
No 347
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.85 E-value=2.2e-07 Score=84.09 Aligned_cols=237 Identities=18% Similarity=0.179 Sum_probs=135.8
Q ss_pred hHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHH-HHh--cCCCCEEEEcCCCccc--------hHHHHH-----------
Q 019543 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAV-THL--LGTGEEIVAGDDLYGG--------TDRLLS----------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~--~~l~~~sG~~A~~~i-l~l--l~~GD~Vi~~~~~y~~--------~~~~~~----------- 111 (339)
.-+.|-.+||-+.|+. +++++.|-+..++.+ .+. .++|+.||++.-..++ ...+..
T Consensus 77 lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P 156 (407)
T COG3844 77 LPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAP 156 (407)
T ss_pred chhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeCh
Confidence 3467788888899875 455544444444433 333 4469999997642111 111100
Q ss_pred -----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccccCCCc
Q 019543 112 -----------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDV 161 (339)
Q Consensus 112 -----------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g~~~~ 161 (339)
.+|.++||+||++++.|=+|+.|... +-...|+|+.|++..||++|..+.
T Consensus 157 ~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGa 236 (407)
T COG3844 157 RALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGA 236 (407)
T ss_pred HHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCC
Confidence 99999999999999999999998763 233568999999999999866556
Q ss_pred eEEEEEEcChhHHHHHHH-------------H----------HHhcCCCCChHHHHHHHhchhh-----HHHHHHHHHHH
Q 019543 162 MAGVLAVKGERLAKELYF-------------L----------QNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDN 213 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~-------------~----------~~~~~~~~~~~~a~~~~~~l~~-----~~~r~~~~~~~ 213 (339)
.+|..+.++ ..++... + +++.....+-...+.+..+|+- +.+.+++-...
T Consensus 237 pa~l~v~~~--h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaL 314 (407)
T COG3844 237 PAGLFVAPR--HRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLAL 314 (407)
T ss_pred ceeEEeccc--cccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHH
Confidence 666555432 2222110 0 0111122222233333334443 34445555566
Q ss_pred HHHHHHHHhCCCC---ceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceec
Q 019543 214 AQKIAEFLASHPR---VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISM 290 (339)
Q Consensus 214 a~~l~~~L~~~~~---i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~ 290 (339)
+.++.+.++.+.. .+ +.-| ..| .-.|+.+|+...... ++.+.|-..|+. |++ .
T Consensus 315 Td~fieLvEa~~~~~~l~-l~tP-----r~~-------~~rGsqvS~~hp~~~---~V~qaLi~rGVi---gD~----R- 370 (407)
T COG3844 315 TDYFIELVEARCEYYGLT-LVTP-----RAH-------EERGSQVSLYHPHGY---QVMQALIDRGVI---GDF----R- 370 (407)
T ss_pred HHHHHHHHHhccccCCcE-Eecc-----chh-------hhccceeeEecCcHH---HHHHHHHHcCcc---ccc----c-
Confidence 6777776665422 11 1122 112 126788999886443 455556566663 442 1
Q ss_pred cccccCCCCCHHHHHhCCCCCCeEEEEec-----cCCHHHHHHHHHHHHhcC
Q 019543 291 PCFMSHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLISDLDKALRTG 337 (339)
Q Consensus 291 p~~~~h~~~~~~~~~~~g~~~~~lRisvg-----~e~~~~li~~l~~al~~~ 337 (339)
.++.|||.+. .+|.=+-++.|.++|+++
T Consensus 371 -------------------~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 371 -------------------EPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred -------------------CCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 2367888775 345545566677777653
No 348
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.84 E-value=4e-07 Score=89.24 Aligned_cols=175 Identities=15% Similarity=0.172 Sum_probs=98.1
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 185 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~ 185 (339)
++|.++|++||+++|.||++. .|-.+. ......||++ ++|.+++. .-.|.++.++ ++ +.+.......+
T Consensus 249 ~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt--~gK~l~gG--~Pi~av~~~~-~~-~~~~~~~~~~T 322 (459)
T PRK06931 249 QKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV--MSKAVGGG--LPLAVLGIKK-EF-DAWQPGGHTGT 322 (459)
T ss_pred HHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE--ecccccCC--cceeeeeeHH-HH-hhccCCCCCCC
Confidence 999999999999999999973 332221 1233458876 59999863 3345566553 33 33321111123
Q ss_pred CCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee
Q 019543 186 SGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 259 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~ 259 (339)
..-+|+.+++++..|+.+.. ..++.++..+++.+.|+. +|.|.. .+|.|.++.+++
T Consensus 323 ~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~------------------vrG~Glm~giel 384 (459)
T PRK06931 323 FRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGN------------------VRGRGLMIGIEI 384 (459)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEe------------------EecCceEEEEEE
Confidence 45578888877777776532 234444445555555543 332222 245778888887
Q ss_pred C-C-------------HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHH
Q 019543 260 G-S-------------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVND 325 (339)
Q Consensus 260 ~-~-------------~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~ 325 (339)
. + ...+.++.+.+...|+.+..++ ...+.+|+.+-+..+++
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-------------------------~~~~~l~~~Ppl~it~~ 439 (459)
T PRK06931 385 VDERQPADAMGSYPADGELAAAIQKACFENGLLLERGG-------------------------RNGNVVRLLPPLLITQA 439 (459)
T ss_pred ccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecC-------------------------CCCCEEEEECCCCcCHH
Confidence 3 2 1223455555555555432110 12356888877655555
Q ss_pred HHHHHHHHHh
Q 019543 326 LISDLDKALR 335 (339)
Q Consensus 326 li~~l~~al~ 335 (339)
.|+.+.++|+
T Consensus 440 eid~~~~~l~ 449 (459)
T PRK06931 440 ECEEFIDRFE 449 (459)
T ss_pred HHHHHHHHHH
Confidence 5554444443
No 349
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.84 E-value=4.1e-07 Score=89.32 Aligned_cols=129 Identities=14% Similarity=0.169 Sum_probs=77.1
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-----
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----- 180 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~----- 180 (339)
++|.++|++||+++|.||++ +.|-.+. ......|+++. +|.++|. -.-.|.+++++ ++.+.+..-
T Consensus 239 ~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG-~~Pi~av~~~~-ei~~~~~~~~~~~~ 314 (466)
T PRK07030 239 KLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCL--SKALTGG-YLPLAAVLTTD-TVYQAFYDDYPTLR 314 (466)
T ss_pred HHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEee--ehhccCC-cccceEEEecH-HHHHHHhccccccc
Confidence 89999999999999999997 3332222 12334588874 9999953 11245565654 566555310
Q ss_pred --HHhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEE
Q 019543 181 --QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 256 (339)
Q Consensus 181 --~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs 256 (339)
....+..-+|+.+++++..|+.+.+ ..++.++..+++.+.|+.+.. +|.+. ..+|.|.++.
T Consensus 315 ~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~-----~~~v~----------~vrG~Gl~~g 379 (466)
T PRK07030 315 AFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLAD-----HPHVA----------EVRQTGMILA 379 (466)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-----CCCEE----------EeEeceeEEE
Confidence 1112334578888877777776633 234445556666666654311 22110 0245678888
Q ss_pred Eee
Q 019543 257 FLT 259 (339)
Q Consensus 257 ~~~ 259 (339)
|++
T Consensus 380 ie~ 382 (466)
T PRK07030 380 IEM 382 (466)
T ss_pred EEe
Confidence 876
No 350
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.83 E-value=2.1e-07 Score=96.64 Aligned_cols=169 Identities=18% Similarity=0.151 Sum_probs=102.3
Q ss_pred hHHHHHHHHHhHhCCCeEEEcCcH-HHHHHH-HHHh-c-------CCCCEEEEcCCCccchHH-----------------
Q 019543 56 TRDALESLLAKLDKADRALCFTSG-MAALAA-VTHL-L-------GTGEEIVAGDDLYGGTDR----------------- 108 (339)
Q Consensus 56 ~~~~le~~la~~~g~~~~l~~~sG-~~A~~~-il~l-l-------~~GD~Vi~~~~~y~~~~~----------------- 108 (339)
...++++.|+++.|-+.+-++++| .+|..+ +++. . ...+.|+++...++....
T Consensus 531 ~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~ 610 (939)
T TIGR00461 531 LIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQD 610 (939)
T ss_pred HHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCC
Confidence 356899999999998865555554 556552 3221 1 123578887765532211
Q ss_pred ----------HHH------------------------HHHHHHHHHcCCEEEEeCCcCCC--CCcCcccCCCeEEEeccc
Q 019543 109 ----------LLS------------------------RKIAEMAHAHGALLLVDNSIMSP--VLSRPLELGADIVMHSAT 152 (339)
Q Consensus 109 ----------~~~------------------------~~I~~la~~~g~~livD~a~a~g--~~~~~~~~~~Di~~~S~s 152 (339)
.+. ++|+++||++|.++++|.++..+ ...++-..|+|++++|.+
T Consensus 611 G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~H 690 (939)
T TIGR00461 611 GNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLH 690 (939)
T ss_pred CCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCC
Confidence 110 88999999999999999999542 334556689999999999
Q ss_pred cccccC---CCceEEEEEEcChhHHHHHHHH--H---------HhcCC----CCCh----HHHHHHH--hchhhHHHHHH
Q 019543 153 KFIAGH---SDVMAGVLAVKGERLAKELYFL--Q---------NAEGS----GLAP----FDCWICL--RGVKTMALRVE 208 (339)
Q Consensus 153 K~l~g~---~~~~gG~v~~~~~~l~~~l~~~--~---------~~~~~----~~~~----~~a~~~~--~~l~~~~~r~~ 208 (339)
|+|++| |+...|++++++ .+...+... . ...+. .... ..+|+-+ .+-+-+.+..+
T Consensus 691 Ktf~~P~G~GGPg~G~i~vr~-~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~ 769 (939)
T TIGR00461 691 KTFCIPHGGGGPGMGPIGVKS-HLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASV 769 (939)
T ss_pred ccCCCCCCCCCCCeEEEEEhh-hchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHH
Confidence 988844 333458898874 343332200 0 00111 1111 2222222 22234455555
Q ss_pred HHHHHHHHHHHHHhCCC
Q 019543 209 KQQDNAQKIAEFLASHP 225 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~~ 225 (339)
....|+.++++.|++..
T Consensus 770 ~ailnAnYl~~rL~~~~ 786 (939)
T TIGR00461 770 VAILNANYMATRLKDHY 786 (939)
T ss_pred HHHHHHHHHHHHhhccC
Confidence 56678999999998743
No 351
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.83 E-value=1.2e-07 Score=90.65 Aligned_cols=179 Identities=17% Similarity=0.217 Sum_probs=111.9
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCcc-----cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-H---
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-Q--- 181 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~~~-----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~-~--- 181 (339)
+++.++|++||+++|.||+. ++|-.+..+ ....||++ ++|.+++.--.+++.+ +++ ++.+.+..- .
T Consensus 239 ~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~--~aKGLT~GY~Pl~a~l-~~~-~I~~~~~~~~~~~f 314 (449)
T COG0161 239 KRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILC--LAKGLTGGYLPLSAVL-TSD-RIYEAFSDGDAGAF 314 (449)
T ss_pred HHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeee--ecccccccchhhHhHh-hhH-HHHHHHhcccCCee
Confidence 99999999999999999975 444333322 22348877 5899986433444444 443 566655442 1
Q ss_pred -HhcCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhC-C---CCceEEecCCCCCCCchHhHhhhcCCCcce
Q 019543 182 -NAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS-H---PRVKKVNYAGLPEHPGHELHYSQAKGAGSV 254 (339)
Q Consensus 182 -~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~-~---~~i~~v~~p~~~~~~~~~~~~~~~~~~~~i 254 (339)
..++.+-+|+.+++++..|+-++ ..+++..+...++.+.|+. + |.|-.| ++.|-+
T Consensus 315 ~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdV------------------R~~Gli 376 (449)
T COG0161 315 MHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDV------------------RGLGLI 376 (449)
T ss_pred ccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEe------------------eccceE
Confidence 12345668999999988888764 2355555667777777765 2 233222 345667
Q ss_pred EEEee-CCHH--------HHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHH
Q 019543 255 LSFLT-GSLA--------LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVND 325 (339)
Q Consensus 255 vs~~~-~~~~--------~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~ 325 (339)
..+++ .+.. ...++.+...+.|+.++..+. .+...| -+.++.|+.++
T Consensus 377 ~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g~-~i~~~P-----------------------Pliit~~eid~ 432 (449)
T COG0161 377 GAIELVADKATKTPFEARVGARVRAAALERGLLIRPLGD-VIYLMP-----------------------PLIITREEIDE 432 (449)
T ss_pred EEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecCC-EEEEcC-----------------------CccCCHHHHHH
Confidence 77775 2221 245666667777888885443 111222 13566677888
Q ss_pred HHHHHHHHHhc
Q 019543 326 LISDLDKALRT 336 (339)
Q Consensus 326 li~~l~~al~~ 336 (339)
+++.+.++|+.
T Consensus 433 l~~~l~~al~~ 443 (449)
T COG0161 433 LVDALREALDE 443 (449)
T ss_pred HHHHHHHHHHH
Confidence 89999888874
No 352
>PLN02452 phosphoserine transaminase
Probab=98.79 E-value=3.2e-07 Score=87.19 Aligned_cols=235 Identities=11% Similarity=0.057 Sum_probs=135.8
Q ss_pred chHHHHHHHHHhHhCCC---eEEEc-CcHHHHHHH-HHHhcCCCCEEEEcCCCccchHH---------------------
Q 019543 55 PTRDALESLLAKLDKAD---RALCF-TSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDR--------------------- 108 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~-~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~--------------------- 108 (339)
...++.++.|.++++.+ +++++ .||+.++.+ ++.++.+||.+++-..-+.+-+.
T Consensus 52 ~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~ 131 (365)
T PLN02452 52 SIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKY 131 (365)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCC
Confidence 46788999999999863 35555 566888875 55699999988775432222110
Q ss_pred -----H--HH---------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEeccccccccCC
Q 019543 109 -----L--LS---------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHS 159 (339)
Q Consensus 109 -----~--~~---------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK~l~g~~ 159 (339)
. ++ ..+-+++ ++++++|.+.+.|.. .+.-.+++| ..|.+|++|.+|
T Consensus 132 ~~~~~~~~~~~~~~~~~v~~~hnETstGv~~~~~~~i~---~~~lvVDa~Ss~g~~pidv~~~~v~--~~saqK~lGP~G 206 (365)
T PLN02452 132 TKIPSVSEWELTPDAKFVHICANETIHGVEFKDYPDVG---NVPLVADMSSNFLSKPVDVSKYGVI--YAGAQKNVGPSG 206 (365)
T ss_pred CCCCChHHcCCCCCCcEEEECCCCCCCcEecCcccccC---CCeEEEECCccccCcccCHHHcCEE--EEecccccCCCC
Confidence 0 00 1122221 378888888776643 222334444 469999997443
Q ss_pred CceEEEEEEcChhHHHHHHHH-------HH---hcC-CCCChHHHH-H---HHhchh---hHHHHHHHHHHHHHHHHHHH
Q 019543 160 DVMAGVLAVKGERLAKELYFL-------QN---AEG-SGLAPFDCW-I---CLRGVK---TMALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 160 ~~~gG~v~~~~~~l~~~l~~~-------~~---~~~-~~~~~~~a~-~---~~~~l~---~~~~r~~~~~~~a~~l~~~L 221 (339)
.|+++.++ ++.+++... .. ... ...+|.... . ++..++ .++.+.++.+++++++.++|
T Consensus 207 ---l~~v~vr~-~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l 282 (365)
T PLN02452 207 ---VTIVIIRK-DLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAI 282 (365)
T ss_pred ---eEEEEEcH-HHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 36777765 455443211 10 001 122333222 2 222232 25667777788899999999
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCH
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 301 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~ 301 (339)
++.+++ +.+.. ++.+ + ...+++|.+.+.+...+|.+.++..|+..=-| |+.
T Consensus 283 ~~~~G~---y~~~~--~~~~-------r-s~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G-------------~r~--- 333 (365)
T PLN02452 283 DESNGF---YVCPV--EKSV-------R-SLMNVPFTLGGSELEAEFVKEAAKAGMVQLKG-------------HRS--- 333 (365)
T ss_pred HhCCCc---ccCCC--ChHH-------h-CCeEEEEEcCCchhHHHHHHHHHHCCCcccCC-------------ccc---
Confidence 987765 11111 1110 1 24589999876656678999998877643222 111
Q ss_pred HHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 302 EVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 302 ~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+. + +|+|+--+-+.+-++.|.+++++
T Consensus 334 -------~g-g-~R~s~yna~~~~~v~~L~~~m~~ 359 (365)
T PLN02452 334 -------VG-G-MRASIYNAMPLAGVEKLVAFMKD 359 (365)
T ss_pred -------cC-c-eEEECcCCCCHHHHHHHHHHHHH
Confidence 12 3 99999766666666666666654
No 353
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.76 E-value=1.2e-06 Score=86.05 Aligned_cols=175 Identities=17% Similarity=0.200 Sum_probs=97.0
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-----
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----- 180 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~----- 180 (339)
+++.++|++||+++|.||++ +.|-.+. ......||++. +|.++|.--.++ .+++++ ++.+.+...
T Consensus 261 ~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~--gKgl~gG~~Pla-av~~~~-ei~~~~~~~~~~~~ 336 (472)
T PRK08742 261 RRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCL--SKGLTGGFLPLS-AVLATQ-QLYDAFLDDSRERA 336 (472)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEE--cccccCCCCCcc-eeeccH-HHHHHhhccCccCc
Confidence 99999999999999999997 3432221 12234588874 999985311244 454553 565554311
Q ss_pred -HHhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHh---CCCCceEEecCCCCCCCchHhHhhhcCCCcce
Q 019543 181 -QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLA---SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 254 (339)
Q Consensus 181 -~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~---~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~i 254 (339)
....+..-+|+.+++++..|+.+.+ ..++..+..+++.+.++ +++.|.. .+|.|.+
T Consensus 337 ~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~~~~~~i~d------------------vRG~Gl~ 398 (472)
T PRK08742 337 FLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQIGEHPHVAD------------------VRQAGMV 398 (472)
T ss_pred cCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhcCCCeee------------------EeccceE
Confidence 0112234578887777777766532 12233333344443333 3332222 2457788
Q ss_pred EEEeeC-CH----------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEecc---
Q 019543 255 LSFLTG-SL----------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--- 320 (339)
Q Consensus 255 vs~~~~-~~----------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~--- 320 (339)
+.|++. +. ..+.++.+.+.+.|+.+.. ..+.|||..-+
T Consensus 399 ~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~----------------------------~g~vi~~~PpL~it 450 (472)
T PRK08742 399 VAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRP----------------------------LGDVLYWMPPYCVD 450 (472)
T ss_pred EEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEe----------------------------cCCEEEEECCCCCC
Confidence 888762 11 1124455555555654321 11457777644
Q ss_pred -CCHHHHHHHHHHHHhc
Q 019543 321 -EDVNDLISDLDKALRT 336 (339)
Q Consensus 321 -e~~~~li~~l~~al~~ 336 (339)
++.+++++.|.++|++
T Consensus 451 ~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 451 EAQLALLADTTRHAIDE 467 (472)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 5566667777777654
No 354
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.74 E-value=3.7e-07 Score=88.84 Aligned_cols=106 Identities=14% Similarity=0.158 Sum_probs=65.8
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcCc------ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHH--HHHH--H
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSRP------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE--LYFL--Q 181 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~~------~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~--l~~~--~ 181 (339)
++|.++|++||+++|+||+| +|+.... .....|+ .+++|.+++. ..+|++++++ ++.+. +... .
T Consensus 207 ~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi--~t~gK~lggG--~p~~av~~~~-~i~~~~~~~~~~~~ 280 (431)
T PRK06209 207 HEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDL--SCFGKALGNG--FAVSALAGKR-EYMELGGLEHTDRE 280 (431)
T ss_pred HHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcce--eeehhhhcCC--cccEEEEEHH-HHHhhhcccccCCC
Confidence 89999999999999999998 5542211 1223476 5579999962 4567787764 56654 2110 1
Q ss_pred H--hcCCC--CChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhC
Q 019543 182 N--AEGSG--LAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 182 ~--~~~~~--~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~ 223 (339)
+ .++++ .+|..++.++..|+.+. ...++.+++.+++.+.|++
T Consensus 281 ~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~ 328 (431)
T PRK06209 281 RVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNE 328 (431)
T ss_pred CceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 1 13333 34577766766666653 2355556666677776654
No 355
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.73 E-value=1.5e-07 Score=88.83 Aligned_cols=167 Identities=21% Similarity=0.266 Sum_probs=104.8
Q ss_pred CCCCchHHHHHHHHHhHh--CCCeEEEcCcHHHHHHHHHH--h------c-CCCCEEEEcCCCccchH------------
Q 019543 51 RSGNPTRDALESLLAKLD--KADRALCFTSGMAALAAVTH--L------L-GTGEEIVAGDDLYGGTD------------ 107 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~--g~~~~l~~~sG~~A~~~il~--l------l-~~GD~Vi~~~~~y~~~~------------ 107 (339)
...++...+|.++|.+.. +.+.+..++||++|+...+. . . .....|++-...|+|..
T Consensus 55 ~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~ 134 (339)
T PF00202_consen 55 GFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPY 134 (339)
T ss_dssp TSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHH
T ss_pred ceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccc
Confidence 345678889999999998 45678899999999975433 2 1 23467888776666521
Q ss_pred --------------------H-------------HHH-----------------------------HHHHHHHHHcCCEE
Q 019543 108 --------------------R-------------LLS-----------------------------RKIAEMAHAHGALL 125 (339)
Q Consensus 108 --------------------~-------------~~~-----------------------------~~I~~la~~~g~~l 125 (339)
. .+. ++|.++|++||+++
T Consensus 135 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gill 214 (339)
T PF00202_consen 135 RKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILL 214 (339)
T ss_dssp HTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EE
T ss_pred cccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccce
Confidence 1 000 99999999999999
Q ss_pred EEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhc
Q 019543 126 LVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 199 (339)
Q Consensus 126 ivD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~ 199 (339)
|+||++. .|-.+.. .....|+++. +|.+++. ...|.+++++ ++.+.+.......+..-+|+.++++...
T Consensus 215 I~DEV~tG~gRtG~~~a~~~~gv~PDiv~~--gK~l~gG--~p~sav~~~~-~i~~~~~~~~~~~T~~g~p~~~aaa~~~ 289 (339)
T PF00202_consen 215 IADEVQTGFGRTGKFFASEHYGVDPDIVTF--GKGLGGG--LPISAVLGSE-EIMEAFQPGSHGSTFGGNPLSCAAALAT 289 (339)
T ss_dssp EEEETTTTTTTTSSSSGHHHHTSSSSEEEE--EGGGGTT--SSEEEEEEEH-HHHTTSCTTSSTCTTTT-HHHHHHHHHH
T ss_pred ecccccccccccCCccceecccccCccccc--ccchhhh--hhcccccccc-hhhccccccccccccccchHhhhhhhhH
Confidence 9999984 3322221 2345699886 6999974 4455666664 5555442222122344568877777777
Q ss_pred hhhHHHH--HHHHHHHHHHHHHHHh
Q 019543 200 VKTMALR--VEKQQDNAQKIAEFLA 222 (339)
Q Consensus 200 l~~~~~r--~~~~~~~a~~l~~~L~ 222 (339)
|+.+++. .++.++..+++.+.|+
T Consensus 290 l~~~~~~~~~~~~~~~g~~l~~~L~ 314 (339)
T PF00202_consen 290 LEILEEEDLLERVRELGERLREGLR 314 (339)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHH
Confidence 7665432 4444455555555554
No 356
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.72 E-value=5.3e-07 Score=91.41 Aligned_cols=166 Identities=10% Similarity=0.023 Sum_probs=100.4
Q ss_pred chHHHHHHHHHhHhCCCeEEEcCcH-HHHHHH-HHHhcCCCCEEEEcCCCccchHH------------------------
Q 019543 55 PTRDALESLLAKLDKADRALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGTDR------------------------ 108 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~sG-~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~------------------------ 108 (339)
....+.|+..|+.||++++.++.+| +.+|.+ ++++++|||.|+++++.+-....
T Consensus 195 G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g~ 274 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGG 274 (713)
T ss_pred hHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcCC
Confidence 4578999999999999999998888 566764 56689999999998874321111
Q ss_pred -------------HHH-------------------------HHHHHHHHHcCCEE-EEeCCcCCCCCcC-------cccC
Q 019543 109 -------------LLS-------------------------RKIAEMAHAHGALL-LVDNSIMSPVLSR-------PLEL 142 (339)
Q Consensus 109 -------------~~~-------------------------~~I~~la~~~g~~l-ivD~a~a~g~~~~-------~~~~ 142 (339)
.+. ++|.++| |+.+ ++|+||+....+. ++..
T Consensus 275 I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~ 351 (713)
T PRK15399 275 IPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSG 351 (713)
T ss_pred CChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhhC
Confidence 010 5666666 7877 5999997543211 1212
Q ss_pred --CCeEE---EeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC-CCCCh-HHHHH--HHhchhh--HHHHHHHHH
Q 019543 143 --GADIV---MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAP-FDCWI--CLRGVKT--MALRVEKQQ 211 (339)
Q Consensus 143 --~~Di~---~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~-~~~~~-~~a~~--~~~~l~~--~~~r~~~~~ 211 (339)
++|.+ +.|.||.+++. .++.+|..+..--.+++...-.++. ++.+- +.|.+ +.+.++. -....++..
T Consensus 352 ~~~aD~~i~~tQStHKtL~al--TQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~~i 429 (713)
T PRK15399 352 ERVPGKVIFETQSTHKMLAAF--SQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINRSV 429 (713)
T ss_pred CCCCCeeeeeeeehhcccccc--chheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 46766 99999999965 5778888765311234444433333 33222 22211 1222221 122344445
Q ss_pred HHHHHHHHHHhCCC
Q 019543 212 DNAQKIAEFLASHP 225 (339)
Q Consensus 212 ~~a~~l~~~L~~~~ 225 (339)
+.+..+++.+.+.+
T Consensus 430 ~~a~~fR~~l~~~~ 443 (713)
T PRK15399 430 ERALHFRKEVQRLR 443 (713)
T ss_pred HHHHHHHHHHHhcc
Confidence 55666666666544
No 357
>PRK07483 hypothetical protein; Provisional
Probab=98.72 E-value=1.5e-06 Score=84.87 Aligned_cols=183 Identities=15% Similarity=0.174 Sum_probs=103.3
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH----
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---- 181 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~---- 181 (339)
++|.++|++||+++|+||++. .|-.+. -.....||++ ++|.+++. -.-.|.+++++ ++.+.+..-.
T Consensus 224 ~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~gG-~~Pi~av~~~~-~i~~~~~~~~~~~~ 299 (443)
T PRK07483 224 KRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVT--IAKGLGAG-YQPIGAVLASD-RIYDAIADGSGFFQ 299 (443)
T ss_pred HHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeee--ehhhhccC-ccccEEEEEcH-HHHHHHhcCCCccc
Confidence 899999999999999999973 332221 1223458777 49999853 11245555654 5655553211
Q ss_pred HhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceE
Q 019543 182 NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 255 (339)
Q Consensus 182 ~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~iv 255 (339)
...+..-+|+.+++++..|+.+++ ..++.++..+++.+.|++ ++.|.. .+|.|.++
T Consensus 300 h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vRG~Glm~ 361 (443)
T PRK07483 300 HGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGD------------------IRGRGLFV 361 (443)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeee------------------EeecccEE
Confidence 112344578887777777776532 244445556666666653 332222 24577888
Q ss_pred EEeeCCH-----------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEec----c
Q 019543 256 SFLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----I 320 (339)
Q Consensus 256 s~~~~~~-----------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg----~ 320 (339)
.+++... .....+.+.+...|+.+...+ ..+ .|...+.|||..- .
T Consensus 362 gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-------~~~-------------~~~~~~~l~~~PpL~it~ 421 (443)
T PRK07483 362 GVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMG-------GTI-------------DGVRGDHVLLAPPFIITA 421 (443)
T ss_pred EEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecC-------ccc-------------cCCCCCEEEEECCCCCCH
Confidence 8876211 123456666666666543110 000 0011356887664 4
Q ss_pred CCHHHHHHHHHHHHhc
Q 019543 321 EDVNDLISDLDKALRT 336 (339)
Q Consensus 321 e~~~~li~~l~~al~~ 336 (339)
++.++.++.|.++|++
T Consensus 422 ~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 422 AQIDEIVERLGDAIDA 437 (443)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5566666666666653
No 358
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.72 E-value=1.6e-07 Score=95.07 Aligned_cols=168 Identities=13% Similarity=0.066 Sum_probs=104.3
Q ss_pred chHHHHHHHHHhHhCCCeEEEcCcH-HHHHHH-HHHhcCCCCEEEEcCCCccchHH------------------------
Q 019543 55 PTRDALESLLAKLDKADRALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGTDR------------------------ 108 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~sG-~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~------------------------ 108 (339)
....+.|+..|+.+|++++.++.+| +.+|.+ ++++++|||.|+++++.+-....
T Consensus 195 G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~ 274 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGG 274 (714)
T ss_pred hHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccC
Confidence 4578999999999999999998888 567765 55689999999998874321111
Q ss_pred ---------H----HH-------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-------CcccCC
Q 019543 109 ---------L----LS-------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-------RPLELG 143 (339)
Q Consensus 109 ---------~----~~-------------------------~~I~~la~~~g~~livD~a~a~g~~~-------~~~~~~ 143 (339)
. +. +.|.++|+.++ |++|+||+....+ .++..+
T Consensus 275 I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~g 352 (714)
T PRK15400 275 IPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGG 352 (714)
T ss_pred CCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcChhhcC
Confidence 0 10 88999998887 7999999754321 122345
Q ss_pred C---e--EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC-CCCC-hHHHH--HHHhchhh--HHHHHHHHHH
Q 019543 144 A---D--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLA-PFDCW--ICLRGVKT--MALRVEKQQD 212 (339)
Q Consensus 144 ~---D--i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~-~~~~-~~~a~--~~~~~l~~--~~~r~~~~~~ 212 (339)
+ | +++.|.+|.+++. .++.+|..+..--.+++...-.++. ++.+ ++.|. .+.+.++. -....++..+
T Consensus 353 a~~~~~i~vtQStHKtL~al--TQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~ 430 (714)
T PRK15400 353 RVEGKVIYETQSTHKLLAAF--SQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIE 430 (714)
T ss_pred CCCCCceEEEEchhhcccch--hHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 5 5 9999999999965 4566665544211234444333333 3322 22221 11222221 1233445556
Q ss_pred HHHHHHHHHhCCCC
Q 019543 213 NAQKIAEFLASHPR 226 (339)
Q Consensus 213 ~a~~l~~~L~~~~~ 226 (339)
.+..+++.+.++++
T Consensus 431 ~a~~~R~~l~~~~~ 444 (714)
T PRK15400 431 RAIKFRKEIKRLRT 444 (714)
T ss_pred HHHHHHHHHHhCCC
Confidence 66677777766554
No 359
>PLN02263 serine decarboxylase
Probab=98.70 E-value=8.5e-06 Score=79.24 Aligned_cols=173 Identities=16% Similarity=0.125 Sum_probs=108.5
Q ss_pred HHHHHHH----HHhHhCCC----eEEEcCcHHHHHH-HHHH--hcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 57 RDALESL----LAKLDKAD----RALCFTSGMAALA-AVTH--LLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 57 ~~~le~~----la~~~g~~----~~l~~~sG~~A~~-~il~--ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
..++|+. +++++|.+ ...++++|++||. +++. -..+...|++++..+........
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~ 210 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLVS 210 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCCC
Confidence 5667765 45666643 2678888899986 3332 22344467777665433322111
Q ss_pred -------------------------------------HHHHHHHHHcCC-----EEEEeCCcCCCCC--c-C--cc--cC
Q 019543 112 -------------------------------------RKIAEMAHAHGA-----LLLVDNSIMSPVL--S-R--PL--EL 142 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~-----~livD~a~a~g~~--~-~--~~--~~ 142 (339)
++|.++|++||+ ++.||+|++.... . . .+ ..
T Consensus 211 g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~ 290 (470)
T PLN02263 211 GEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKK 290 (470)
T ss_pred CcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCc
Confidence 999999999997 9999999975432 1 1 11 12
Q ss_pred CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh--------cCCCC--ChHHHHHHHh--chhhHHHHHHHH
Q 019543 143 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------EGSGL--APFDCWICLR--GVKTMALRVEKQ 210 (339)
Q Consensus 143 ~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--------~~~~~--~~~~a~~~~~--~l~~~~~r~~~~ 210 (339)
.+|-++.+.+|+++.| ...|+++.++ ...+.+.....+ .|+.- .++..|..++ +.+.+.++.++.
T Consensus 291 ~vDSIsvD~HK~l~~P--~~cgvll~R~-~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~ 367 (470)
T PLN02263 291 PIGSVSVSGHKFVGCP--MPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKC 367 (470)
T ss_pred CccEEEECCccccCCC--cCEEEEEEeh-hhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 3788889999999966 4467888875 333322211111 12221 2344554443 556788899999
Q ss_pred HHHHHHHHHHHhCCCCceEEecC
Q 019543 211 QDNAQKIAEFLASHPRVKKVNYA 233 (339)
Q Consensus 211 ~~~a~~l~~~L~~~~~i~~v~~p 233 (339)
.++++++.+.|++. ++..+..|
T Consensus 368 ~~~A~~l~~~l~~~-g~~~~~~p 389 (470)
T PLN02263 368 LRNAHYLKDRLREA-GISAMLNE 389 (470)
T ss_pred HHHHHHHHHHHHhC-CCeEEeCC
Confidence 99999999999987 44444434
No 360
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.67 E-value=1.1e-06 Score=81.36 Aligned_cols=153 Identities=17% Similarity=0.175 Sum_probs=88.8
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcC--cc-cC--CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH-Hhc
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSR--PL-EL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAE 184 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~--~~-~~--~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-~~~ 184 (339)
++..++|+++|.+.|.||++. +|-.+. .. .. -.||+ |+.|.+|.. -.+| .+++.+ ++.+-+.+.. .+.
T Consensus 236 ka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIv--TmAKgiGnG-~Pl~-AVvtt~-EIa~v~~~~~~~fn 310 (442)
T KOG1404|consen 236 KAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIV--TMAKGIGNG-FPLG-AVVTTP-EIADVLNQKSSHFN 310 (442)
T ss_pred HHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHH--HHHhhccCC-Ccce-eeecCH-HHHHHHHhcccccc
Confidence 999999999999999999983 332211 11 11 22554 689999954 3444 555554 5666555443 234
Q ss_pred CCCCChHHHHHHHhchhhHHHH-HH-HHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee-CC
Q 019543 185 GSGLAPFDCWICLRGVKTMALR-VE-KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GS 261 (339)
Q Consensus 185 ~~~~~~~~a~~~~~~l~~~~~r-~~-~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~-~~ 261 (339)
+..-+|..++.++..|+-+.++ ++ ...+-..++.+.|..+.. .+|-+.+ .+|.|-++-+++ .+
T Consensus 311 TyggnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d----~h~iIGd----------VRG~GLm~GvE~V~d 376 (442)
T KOG1404|consen 311 TYGGNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKD----KHPIIGD----------VRGRGLMLGVELVSD 376 (442)
T ss_pred ccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh----cCCceee----------cccceeEEEEEEecc
Confidence 5566788888887777665322 11 122234455555544321 1121110 256788888875 33
Q ss_pred H--------HHHHHHHccCCcceeecccCC
Q 019543 262 L--------ALSKHVVETTKYFSITVSFGS 283 (339)
Q Consensus 262 ~--------~~~~~~~~~L~~~~i~v~~G~ 283 (339)
. .....+.+.+++.|+.|.-|+
T Consensus 377 k~~~~pp~~~~~~~i~~~cke~Gvlvg~g~ 406 (442)
T KOG1404|consen 377 KSEPKPPATAEGAVIGEQCKELGVLVGKGG 406 (442)
T ss_pred cCCCCCcchHHHHHHHHHHHHhCeeeeccc
Confidence 2 123456677888888886665
No 361
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.63 E-value=8.3e-07 Score=86.83 Aligned_cols=114 Identities=25% Similarity=0.326 Sum_probs=87.1
Q ss_pred chHHHHHHHHHhHhCCCeEEEcCcHH-HHHHH-HHHhcCCCCEEEEcCCCccchHH------------------------
Q 019543 55 PTRDALESLLAKLDKADRALCFTSGM-AALAA-VTHLLGTGEEIVAGDDLYGGTDR------------------------ 108 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~sG~-~A~~~-il~ll~~GD~Vi~~~~~y~~~~~------------------------ 108 (339)
....+.|+..|+.+|+++..+..+|+ .||.+ ++++++|||.|+++++..-....
T Consensus 70 G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~g 149 (557)
T COG1982 70 GPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIG 149 (557)
T ss_pred ccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccccC
Confidence 35789999999999999999888885 67764 66799999999999875322111
Q ss_pred -----HHH---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-----C-cccCCCeEEEec
Q 019543 109 -----LLS---------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-----R-PLELGADIVMHS 150 (339)
Q Consensus 109 -----~~~---------------------------~~I~~la~~~g~~livD~a~a~g~~~-----~-~~~~~~Di~~~S 150 (339)
.++ ++|.+.++++++++.+|++|+..... . ....++|+++.|
T Consensus 150 gI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tqS 229 (557)
T COG1982 150 GIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQS 229 (557)
T ss_pred CCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceEEEec
Confidence 000 99999999999999999999764321 1 123578999999
Q ss_pred cccccccCCCceEEEEEEcC
Q 019543 151 ATKFIAGHSDVMAGVLAVKG 170 (339)
Q Consensus 151 ~sK~l~g~~~~~gG~v~~~~ 170 (339)
.+|.+++. .++.+|..++
T Consensus 230 ~HK~l~al--SQaS~iHv~~ 247 (557)
T COG1982 230 THKLLAAL--SQASMIHVKD 247 (557)
T ss_pred hhhhhhhh--hhhHHHhhCC
Confidence 99999954 5677777664
No 362
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=98.63 E-value=9.2e-06 Score=73.29 Aligned_cols=166 Identities=16% Similarity=0.188 Sum_probs=103.8
Q ss_pred HHHHHHHHHhHhCCC---eEEEcCcHHHHHHHH-HHhcCCCCEEEEcCC-CccchH------------------------
Q 019543 57 RDALESLLAKLDKAD---RALCFTSGMAALAAV-THLLGTGEEIVAGDD-LYGGTD------------------------ 107 (339)
Q Consensus 57 ~~~le~~la~~~g~~---~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~-~y~~~~------------------------ 107 (339)
.+++.+-+...|... .-++-.||+.+..+. ..++.|||.|++-.. +|+--.
T Consensus 52 m~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~l 131 (385)
T KOG2862|consen 52 MDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPL 131 (385)
T ss_pred HHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccH
Confidence 345555566666543 234456788999754 458999999988543 111100
Q ss_pred HHHH---------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEeccccccccCC
Q 019543 108 RLLS---------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHS 159 (339)
Q Consensus 108 ~~~~---------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK~l~g~~ 159 (339)
..+. +.+-++||+|++.++||.+.+.|.. +.--++++|+......|++++|.
T Consensus 132 e~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~ 211 (385)
T KOG2862|consen 132 EEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPA 211 (385)
T ss_pred HHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCC
Confidence 0000 6778999999999999999876643 33446899999988999999886
Q ss_pred CceEEEEEEcChhHHHHHHHHH--------------HhcCC--------CCChHH------HHHHHhchhhHHHHHHHHH
Q 019543 160 DVMAGVLAVKGERLAKELYFLQ--------------NAEGS--------GLAPFD------CWICLRGVKTMALRVEKQQ 211 (339)
Q Consensus 160 ~~~gG~v~~~~~~l~~~l~~~~--------------~~~~~--------~~~~~~------a~~~~~~l~~~~~r~~~~~ 211 (339)
+. +.|+.++ ...++++... ++++. ..+|.. +++.+..=+-++.+.++++
T Consensus 212 GL--siisfS~-ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~ 288 (385)
T KOG2862|consen 212 GL--SIISFSD-KALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHR 288 (385)
T ss_pred Cc--ceeecCH-HHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 53 4565554 4445554322 11111 112221 2222222234677888899
Q ss_pred HHHHHHHHHHhCCC
Q 019543 212 DNAQKIAEFLASHP 225 (339)
Q Consensus 212 ~~a~~l~~~L~~~~ 225 (339)
++++++...|+++.
T Consensus 289 e~s~~l~~~l~~~G 302 (385)
T KOG2862|consen 289 EMSKWLKLSLEALG 302 (385)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998763
No 363
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.63 E-value=1.7e-06 Score=84.37 Aligned_cols=131 Identities=21% Similarity=0.255 Sum_probs=87.0
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCC--cCc-----cc-CCCeEEEeccccccccCCCceEEEEEEcChh-HHHHHHHHHH
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVL--SRP-----LE-LGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELYFLQN 182 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~--~~~-----~~-~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~-l~~~l~~~~~ 182 (339)
++|.++|+++|+++.||+|+|..+. .+. .. .++|-++.+++|++..| ..+|+++.++++ +.+.+.....
T Consensus 227 ~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP--~~~G~il~rd~e~l~~~~~~~~~ 304 (460)
T COG0076 227 EELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAP--IGCGVVLFRDEEALRRILIFADY 304 (460)
T ss_pred HHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCC--CCceEEEEECHHHhhhhhhcccc
Confidence 9999999999999999999975543 111 11 16789999999998865 446788888763 3332221111
Q ss_pred hcC-----------CCCC--hHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhh
Q 019543 183 AEG-----------SGLA--PFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 247 (339)
Q Consensus 183 ~~~-----------~~~~--~~~a~~~~~--~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~ 247 (339)
+.+ +.+. .+.+|..++ +.+.+.+..++..++++++++.|+..+..+.++-|
T Consensus 305 yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p-------------- 370 (460)
T COG0076 305 YLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEP-------------- 370 (460)
T ss_pred cCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCC--------------
Confidence 111 1111 122333333 34567777888889999999999998767666655
Q ss_pred cCCCcceEEEeeCC
Q 019543 248 AKGAGSVLSFLTGS 261 (339)
Q Consensus 248 ~~~~~~ivs~~~~~ 261 (339)
..++++|...+
T Consensus 371 ---~l~~V~fr~~~ 381 (460)
T COG0076 371 ---ELPIVAFRLKD 381 (460)
T ss_pred ---ccceEEEEcCC
Confidence 35789998744
No 364
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.59 E-value=3.4e-06 Score=76.53 Aligned_cols=208 Identities=16% Similarity=0.230 Sum_probs=119.1
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhc-------C--CCCE-EEEc-CCCccch-H-------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL-------G--TGEE-IVAG-DDLYGGT-D------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll-------~--~GD~-Vi~~-~~~y~~~-~------------- 107 (339)
.+...-++++.+++++|.+..+-+++|-+|+...+-|. + |.|+ ++++ ...|+|- .
T Consensus 99 Ynd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~ 178 (427)
T KOG1402|consen 99 YNDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWD 178 (427)
T ss_pred hhhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhh
Confidence 34456788999999999999999999999987543322 2 5343 3332 2222210 0
Q ss_pred ------------------HHHH------------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcC
Q 019543 108 ------------------RLLS------------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSR 138 (339)
Q Consensus 108 ------------------~~~~------------------------------~~I~~la~~~g~~livD~a~a-~g~~~~ 138 (339)
..++ ++..+||+|||+++|.||.+. .+--++
T Consensus 179 ~fgp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk 258 (427)
T KOG1402|consen 179 GFGPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK 258 (427)
T ss_pred ccCCCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc
Confidence 0111 899999999999999999983 222222
Q ss_pred cc-----cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHHH--HHHHHH
Q 019543 139 PL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQ 211 (339)
Q Consensus 139 ~~-----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~ 211 (339)
-+ ....|+++ +.|+|+|.--...++++ .+ +++..+..-..-.+..=+|+.++.+...|+-+.+ ..++..
T Consensus 259 ~la~d~env~PDivi--lgKalSGG~~Pvsavl~-~~-~im~~~~pgeHgsTyggNpLg~~vaiAalevi~eekL~era~ 334 (427)
T KOG1402|consen 259 LLACDYENVRPDIVI--LGKALSGGVYPVSAVLA-DD-DIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAA 334 (427)
T ss_pred EEEeehhhcCCCeEE--EeccccCCeeeeEEEEe-cH-HHHhccCCCccccccCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 12458887 58999964333444443 33 4443332221112344578888777777776532 233333
Q ss_pred HHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC----HHHHHHHHccCCccee
Q 019543 212 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS----LALSKHVVETTKYFSI 277 (339)
Q Consensus 212 ~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~----~~~~~~~~~~L~~~~i 277 (339)
..-..++..|+.++. .+|..- +..+|.|-+..+++.. ..++-.++-++++.|.
T Consensus 335 ~lG~~l~~~L~~l~~----~~p~~v---------~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~ 391 (427)
T KOG1402|consen 335 KLGEILRDQLNKLQK----KFPHVV---------KEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGL 391 (427)
T ss_pred HHHHHHHHHHHhccc----cccchh---------heeeccceEEEEEeccccccchhHHHHHHccccccc
Confidence 445556666666542 122110 0125677777777642 2345566666766544
No 365
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.51 E-value=4.7e-06 Score=86.89 Aligned_cols=233 Identities=18% Similarity=0.229 Sum_probs=139.7
Q ss_pred hHHHHHHHHHhHhCCC--eEEEcCcHHHHHHH-HHH--hc-CCCCEEEEcCCCccchHHHHH------------------
Q 019543 56 TRDALESLLAKLDKAD--RALCFTSGMAALAA-VTH--LL-GTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~--~~l~~~sG~~A~~~-il~--ll-~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
..-+++..++++.|-+ ++-+...++++-.+ +++ .- +++++|++++..++.+..+++
T Consensus 110 ~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~~~~l 189 (939)
T TIGR00461 110 ALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVDCSDI 189 (939)
T ss_pred HHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEcHHHH
Confidence 3457788899999977 55777888776653 333 22 235899999988887664433
Q ss_pred -----------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCcccCCCeEEEeccccccc--cCCCceEEE
Q 019543 112 -----------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRPLELGADIVMHSATKFIA--GHSDVMAGV 165 (339)
Q Consensus 112 -----------------------~~I~~la~~~g~~livD~a~a-~g~~~~~~~~~~Di~~~S~sK~l~--g~~~~~gG~ 165 (339)
++|.+++|++|++++++.-.. .+...+|-++|+||++++..+.-. |.|+.-+|+
T Consensus 190 ~~~~~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~ 269 (939)
T TIGR00461 190 KKAVDVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGGPHAAF 269 (939)
T ss_pred hhcCCEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCCCceee
Confidence 899999999999999976553 344556777899999886544321 112234789
Q ss_pred EEEcChhHHHHHHHH--------------------HH-hc--CCCCChHHH---------H--HHHhchhhHHHHHHHHH
Q 019543 166 LAVKGERLAKELYFL--------------------QN-AE--GSGLAPFDC---------W--ICLRGVKTMALRVEKQQ 211 (339)
Q Consensus 166 v~~~~~~l~~~l~~~--------------------~~-~~--~~~~~~~~a---------~--~~~~~l~~~~~r~~~~~ 211 (339)
+.+++ .+...+-.. +. .. --+.|.+.. + +...+=+-+.+.-++..
T Consensus 270 ~a~~~-~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~ 348 (939)
T TIGR00461 270 FAVKD-EYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIH 348 (939)
T ss_pred eeecH-hhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Confidence 98875 454432110 00 00 001111111 1 11112122333344455
Q ss_pred HHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceecc
Q 019543 212 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMP 291 (339)
Q Consensus 212 ~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p 291 (339)
.++.++++.|++ .+++.+.-| +-..+.+.++. ..+.++.+++.+.|+.++.
T Consensus 349 ~~a~~l~~~L~~-~G~~~~~~~-----------------fF~~~~v~~~~-~~~~~i~~~~~~~gi~l~~---------- 399 (939)
T TIGR00461 349 SLTSILANGLEN-DPHELINKT-----------------WFDTLTVKVGN-GISSELLKAAEEFNINLRA---------- 399 (939)
T ss_pred HHHHHHHHHHHh-CCCcccCCC-----------------ccceEEEEeCC-CCHHHHHHHHHHCCCeeee----------
Confidence 678888888887 565533222 12344455531 1244566666665654321
Q ss_pred ccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 292 CFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 292 ~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..++.|++|+...++++.|+.|.+++.
T Consensus 400 -----------------~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 400 -----------------VDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred -----------------cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 123679999999999998999998884
No 366
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.49 E-value=4e-06 Score=79.99 Aligned_cols=120 Identities=22% Similarity=0.256 Sum_probs=78.4
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCc----Cccc---CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-HHh
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLS----RPLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QNA 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~----~~~~---~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~-~~~ 183 (339)
++|.++|+++|+++.||+|++..... +... ..+|=++.+++|+++.|- ..|+++.+++......... ..+
T Consensus 214 ~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~--~~~~~l~r~~~~l~~~~~~~~~Y 291 (373)
T PF00282_consen 214 EEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPY--GCGVLLVRDKSDLRDAFSINADY 291 (373)
T ss_dssp HHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SS--S-EEEEESSGGGHHGGGEEEETC
T ss_pred HHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhcCCc--cceeEEeecccchHHHhccChhh
Confidence 89999999999999999999764321 1111 256889999999999764 4678888875443221100 000
Q ss_pred ----------------cCCCCC----hHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecC
Q 019543 184 ----------------EGSGLA----PFDCWICL--RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 233 (339)
Q Consensus 184 ----------------~~~~~~----~~~a~~~~--~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p 233 (339)
++...+ .+..|+.+ .+.+.+.+++++..++++++++.|++.+.++.+.-|
T Consensus 292 l~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~ 363 (373)
T PF00282_consen 292 LGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEP 363 (373)
T ss_dssp TT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTT
T ss_pred hcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 111111 13344443 356678899999999999999999999987755533
No 367
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.46 E-value=4.4e-06 Score=73.56 Aligned_cols=239 Identities=18% Similarity=0.228 Sum_probs=138.8
Q ss_pred CchHHHHHHHHHhHhCC-CeEEEcCcHH-HHHHHHHH-hcCCC-CEEEEcCCCccchH----------------------
Q 019543 54 NPTRDALESLLAKLDKA-DRALCFTSGM-AALAAVTH-LLGTG-EEIVAGDDLYGGTD---------------------- 107 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~-~~~l~~~sG~-~A~~~il~-ll~~G-D~Vi~~~~~y~~~~---------------------- 107 (339)
.+.-+++...++.-.+- .+-+++.-|. .-+.++++ .+.|| +.|+..+|+|.-..
T Consensus 68 d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~ln 147 (375)
T KOG0633|consen 68 DPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLN 147 (375)
T ss_pred CcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCcccc
Confidence 44556677777665442 3566666665 45567665 78899 88988888775211
Q ss_pred -----HHHH-----------------------HHHHHHHHHc-CCEEEEeCCcC--CCCCcC---cccCCCeEEEecccc
Q 019543 108 -----RLLS-----------------------RKIAEMAHAH-GALLLVDNSIM--SPVLSR---PLELGADIVMHSATK 153 (339)
Q Consensus 108 -----~~~~-----------------------~~I~~la~~~-g~~livD~a~a--~g~~~~---~~~~~~Di~~~S~sK 153 (339)
..++ +.|.++-+-. |.++++|||+- .|+... .-.+.-=+++.++||
T Consensus 148 vdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSK 227 (375)
T KOG0633|consen 148 VDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSK 227 (375)
T ss_pred HHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhh
Confidence 1111 4455554332 79999999983 232111 112223478899999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHH-HHHh--chhhHHHHHHHHHHHHHHHHHHHhCCCCceEE
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW-ICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKV 230 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~-~~~~--~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v 230 (339)
.+|-.| .+.|+-..+. .+++.+..+..-+......-.++ .++. .++.++..+....+...+|...|...|.+..
T Consensus 228 sfGLAG-iRvG~~~~~~-~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~- 304 (375)
T KOG0633|consen 228 SFGLAG-IRVGYGAFPL-SIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLND- 304 (375)
T ss_pred hcCcce-eEeecccccH-HHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccC-
Confidence 998644 5667877654 67777766654443322222222 2222 4566776677777777788888888776543
Q ss_pred ecCCCCCCCchHhHhhhcCCCcceEEEee--CCHHHHHHHH-ccCCcceeecccCCcccceeccccccCCCCCHHHHHhC
Q 019543 231 NYAGLPEHPGHELHYSQAKGAGSVLSFLT--GSLALSKHVV-ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQAR 307 (339)
Q Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~ivs~~~--~~~~~~~~~~-~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~ 307 (339)
||+ +..+..+-+++ +++..+..+. +.+...|+.|++-+.+-
T Consensus 305 -~~g--------------g~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~--------------------- 348 (375)
T KOG0633|consen 305 -YPG--------------GSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEE--------------------- 348 (375)
T ss_pred -CCC--------------cccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCcc---------------------
Confidence 443 22455565655 3444444443 33445677777544311
Q ss_pred CCCCCeEEEEeccCC-HHHHHHHHHH
Q 019543 308 GLTEDLVRISVGIED-VNDLISDLDK 332 (339)
Q Consensus 308 g~~~~~lRisvg~e~-~~~li~~l~~ 332 (339)
.-.+.+||++|-++ ..-|++.|.+
T Consensus 349 -~c~G~lRitvGt~EentvL~k~~K~ 373 (375)
T KOG0633|consen 349 -GCKGYLRITVGTPEENTVLMKCLKQ 373 (375)
T ss_pred -ccceeEEEEcCCcccchHHHHHHHh
Confidence 13578999999644 4555555544
No 368
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.41 E-value=3.2e-05 Score=73.18 Aligned_cols=237 Identities=14% Similarity=0.084 Sum_probs=132.2
Q ss_pred chHHHHHHHHHhHhCCC---eEEEcCc-HHHHHHH-HHHhcCCCCEEE-EcCCCccchH---------------------
Q 019543 55 PTRDALESLLAKLDKAD---RALCFTS-GMAALAA-VTHLLGTGEEIV-AGDDLYGGTD--------------------- 107 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~~s-G~~A~~~-il~ll~~GD~Vi-~~~~~y~~~~--------------------- 107 (339)
...++.++.|.++++.+ +++++++ |+.+..+ ++.++.+||.++ +-..-+.+.+
T Consensus 49 ~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g~v~~~~~~~~~~ 128 (364)
T PRK12462 49 SLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVAAMRVVWDGAASG 128 (364)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcCCceEecCcCCCC
Confidence 45788899999999862 4665555 5777775 566999999644 2111111100
Q ss_pred -------HHHH------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccC-CCeEEEeccccccccCCCc
Q 019543 108 -------RLLS------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLEL-GADIVMHSATKFIAGHSDV 161 (339)
Q Consensus 108 -------~~~~------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~-~~Di~~~S~sK~l~g~~~~ 161 (339)
..++ -+.-++.+.+++++|+|.+.+.+. +++.. ..|++..+..|++| |.+
T Consensus 129 ~~~~p~~~~~~~~~d~~~v~~t~NETstGv~~~~~~~~~~~llvvD~sS~~~s--~pid~~~~dvi~agsQKnlg-P~G- 204 (364)
T PRK12462 129 YRTLPSLAELDWDARAPFRHYVSNETVEGLQFPDAAGLPDSPLIADMSSDFMS--RPFDVEAYGMVYAHAQKNLG-PAG- 204 (364)
T ss_pred CCcCCCHHHhccCCCCcEEEEccCCCCceEecCcccccCCCeEEEEcCchhhC--CCCChHHccEEEeeccccCC-CCc-
Confidence 0010 011133344688899998876653 23321 23999999999998 433
Q ss_pred eEEEEEEcChhHHHHHHH-------HHH---h-cCCCCChHH-HHHH---Hhch--h--hHHHHHHHHHHHHHHHHHHHh
Q 019543 162 MAGVLAVKGERLAKELYF-------LQN---A-EGSGLAPFD-CWIC---LRGV--K--TMALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~-------~~~---~-~~~~~~~~~-a~~~---~~~l--~--~~~~r~~~~~~~a~~l~~~L~ 222 (339)
.++++.++ +++++... ++. . .....+|.. -+++ +..| + -++.+.+++++.++.+.++++
T Consensus 205 -ltvvivs~-~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id 282 (364)
T PRK12462 205 -VTVAIIRR-ALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLD 282 (364)
T ss_pred -eEEEEECH-HHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 35777765 45544332 111 1 111233332 2222 2222 1 345667777888999999999
Q ss_pred CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHH
Q 019543 223 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 302 (339)
Q Consensus 223 ~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~ 302 (339)
+.+++ |+.. .++. .++. -.++|.+.+.+...+|.+.++..|+.---| | +
T Consensus 283 ~~~~~----~~~~-~~~~-------~RS~-mnv~f~~~~~~l~~~f~~~a~~~gl~~lkG-------h------r----- 331 (364)
T PRK12462 283 ALNEV----IDCH-AHRA-------ARST-MNVAFRFRQPRLDTLFKEQSTEAGFCGLSG-------H------R----- 331 (364)
T ss_pred hCCCc----ccCC-CChh-------hcCc-ceEEEEcCCHHHHHHHHHHHHHCCCccccC-------C------c-----
Confidence 88753 2211 1111 1222 357777877766778988888777642222 2 1
Q ss_pred HHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 303 VRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 303 ~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+-+-+|+|+--.-+.+-++.|.+-++
T Consensus 332 -------~vgg~Ras~yna~~~e~v~~L~~fm~ 357 (364)
T PRK12462 332 -------SIGGIRASLYNAVSEQAVSRLCAFLK 357 (364)
T ss_pred -------ccCceEEEcCCCCCHHHHHHHHHHHH
Confidence 12459999965555544455544433
No 369
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.41 E-value=1.9e-05 Score=75.73 Aligned_cols=231 Identities=20% Similarity=0.217 Sum_probs=124.4
Q ss_pred hHHHHHHHHHhHhCCCe--EEEcCcHHHHHHH-HH--HhcC-CCCEEEEcCCCccchHHHHH------------------
Q 019543 56 TRDALESLLAKLDKADR--ALCFTSGMAALAA-VT--HLLG-TGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~~--~l~~~sG~~A~~~-il--~ll~-~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
..-+++..++++.|-+- +-+...++++-.+ .+ +.-+ .+++|+++...++.+...++
T Consensus 111 ~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~ 190 (429)
T PF02347_consen 111 ALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDED 190 (429)
T ss_dssp HHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTT
T ss_pred HHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEeccccc
Confidence 45688999999999874 3455566555433 22 2333 34699999998888776655
Q ss_pred -------------------------HHHHHHHHHcCCEEEEeCCc--CCCCCcCcccCCCeEEEeccccccccC---CCc
Q 019543 112 -------------------------RKIAEMAHAHGALLLVDNSI--MSPVLSRPLELGADIVMHSATKFIAGH---SDV 161 (339)
Q Consensus 112 -------------------------~~I~~la~~~g~~livD~a~--a~g~~~~~~~~~~Di~~~S~sK~l~g~---~~~ 161 (339)
++|.+++|++|+.+++ .+- +.+...+|-++|+||++++ +|.||.| |+.
T Consensus 191 ~~~d~~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP 268 (429)
T PF02347_consen 191 GTTDDDDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGP 268 (429)
T ss_dssp CSB-STTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S
T ss_pred CCccccCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCCCCC
Confidence 9999999999999988 554 4455667778999999887 7877644 444
Q ss_pred eEEEEEEcChhHHHHHHH-------------------------HHH--hcC-CCCCh-HH-----HHHHHhchhhHHHHH
Q 019543 162 MAGVLAVKGERLAKELYF-------------------------LQN--AEG-SGLAP-FD-----CWICLRGVKTMALRV 207 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~-------------------------~~~--~~~-~~~~~-~~-----a~~~~~~l~~~~~r~ 207 (339)
..|++++++ .++.++-. .++ -++ .+.+. +. .++...+=+-+.+.-
T Consensus 269 ~~G~~a~~~-~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA 347 (429)
T PF02347_consen 269 GAGFFAVRE-DLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIA 347 (429)
T ss_dssp --EEEEE-G-GGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeeeEEEhh-hhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 578998875 45443321 111 011 11121 11 122333334455556
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccc
Q 019543 208 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSL 287 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~ 287 (339)
++...++.++++.|++..++ .+. ..+.+ -.+....++ ....++.++....|+...
T Consensus 348 ~~~~~~A~yl~~~L~~~~~~---~~~---~~~f~-----------e~v~~~~~~-~~~~~l~~~~~~~gl~~~------- 402 (429)
T PF02347_consen 348 ERIHLNAHYLAERLKKIYGL---PFD---NPFFF-----------EFVVVFSKD-KEVEELLKRGIEGGLNLR------- 402 (429)
T ss_dssp HHHHHHHHHHHHHHCCTTBE---CSS---SSSBS-----------SEEEEESS--HHHHHHHHTT----EEEG-------
T ss_pred HHHHHHHHHHHHHHHHhcCc---ccC---CCCce-----------eeeeecCCc-HHHHHHHHHHHhcCCCcc-------
Confidence 66778999999999986322 121 11111 112222233 445567776655442111
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
.+ ..+.+=++++.-++++.|+.|.++|
T Consensus 403 --~~------------------~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 403 --YP------------------DDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp --GG-------------------SSEEEEE--TT--HHHHHHHHH--
T ss_pred --cc------------------CCCeEEEEccCCCCHHHHHHHHhcC
Confidence 11 2347889999999999999998875
No 370
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.37 E-value=4.3e-05 Score=71.07 Aligned_cols=167 Identities=14% Similarity=0.123 Sum_probs=106.4
Q ss_pred HHHHHHHHHhH-hCCC---------eEEEcCcHHHHHHH---HHHhcCCCCEEEEcCCCccchHHHHH------------
Q 019543 57 RDALESLLAKL-DKAD---------RALCFTSGMAALAA---VTHLLGTGEEIVAGDDLYGGTDRLLS------------ 111 (339)
Q Consensus 57 ~~~le~~la~~-~g~~---------~~l~~~sG~~A~~~---il~ll~~GD~Vi~~~~~y~~~~~~~~------------ 111 (339)
...+.+.++++ ||.. ..+-+.+|+.|+.. ++.-..|...|.+++|+|+....++.
T Consensus 71 ~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yy 150 (396)
T COG1448 71 LPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYY 150 (396)
T ss_pred cHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeecc
Confidence 44566666664 5643 25567899999863 45556788889999999987766654
Q ss_pred --------------------------------------------HHHHHHHHHcCCEEEEeCCc-C--CCCCcCc--c--
Q 019543 112 --------------------------------------------RKIAEMAHAHGALLLVDNSI-M--SPVLSRP--L-- 140 (339)
Q Consensus 112 --------------------------------------------~~I~~la~~~g~~livD~a~-a--~g~~~~~--~-- 140 (339)
++|.++.++.|.+.++|=|| + .|...+. +
T Consensus 151 d~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~ 230 (396)
T COG1448 151 DAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRL 230 (396)
T ss_pred ccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHH
Confidence 89999999999999999997 2 3322111 1
Q ss_pred --cCCC-eEEEeccccccccCCCceEEEEEEc-ChhHHHHHHHH----HHhcCCCCChHH-HHHH---H-------hchh
Q 019543 141 --ELGA-DIVMHSATKFIAGHSDVMAGVLAVK-GERLAKELYFL----QNAEGSGLAPFD-CWIC---L-------RGVK 201 (339)
Q Consensus 141 --~~~~-Di~~~S~sK~l~g~~~~~gG~v~~~-~~~l~~~l~~~----~~~~~~~~~~~~-a~~~---~-------~~l~ 201 (339)
..+. -+++.|+||.||-.+.++|++.+.. +++..+++... .+ ..++.+|.. +.+. + .+.+
T Consensus 231 ~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR-~~ySnPP~~Ga~vva~IL~~p~Lra~W~~ 309 (396)
T COG1448 231 FAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIR-TNYSNPPAHGAAVVATILNNPELRAEWEQ 309 (396)
T ss_pred HHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHH-hccCCCchhhHHHHHHHhCCHHHHHHHHH
Confidence 1122 4888999999998888888886544 44444444332 12 123334432 1111 1 1223
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCC
Q 019543 202 TMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 202 ~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
.+...++++.+.++.+.+.|+.+
T Consensus 310 El~~Mr~Ri~~mR~~lv~~L~~~ 332 (396)
T COG1448 310 ELEEMRQRILEMRQALVDALKAL 332 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 34555666667777888888763
No 371
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.21 E-value=2.5e-05 Score=81.12 Aligned_cols=89 Identities=12% Similarity=0.153 Sum_probs=57.5
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHH------
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF------ 179 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~------ 179 (339)
++|.++|++||+++|.||++. +|-.+.. .....||++ ++|.++|.--.+ |.+++++ ++.+.+..
T Consensus 609 ~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~--~gKgLtgG~~Pl-aa~l~~~-~I~~~f~~~~~~~~ 684 (817)
T PLN02974 609 RALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIAC--YAKLLTGGLVPL-AATLATE-EVFEAFRGPSKLDA 684 (817)
T ss_pred HHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEe--ecccccCCCCcc-EEEEEcH-HHHHhhccccccCC
Confidence 999999999999999999973 3322221 223458887 589998631234 4555553 66665531
Q ss_pred HHHhcCCCCChHHHHHHHhchhhHH
Q 019543 180 LQNAEGSGLAPFDCWICLRGVKTMA 204 (339)
Q Consensus 180 ~~~~~~~~~~~~~a~~~~~~l~~~~ 204 (339)
+....+..-+|+.+++++..|+.++
T Consensus 685 ~~hg~Ty~gnpl~cAaala~L~~~~ 709 (817)
T PLN02974 685 LLHGHSYTAHPMGCAAAAKALQWYK 709 (817)
T ss_pred cccCCCCCcCHHHHHHHHHHHHHHH
Confidence 1112345667888888877777654
No 372
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.20 E-value=0.00012 Score=67.43 Aligned_cols=233 Identities=17% Similarity=0.213 Sum_probs=120.4
Q ss_pred chHHHHHHHHHhHhC-------CCeEEEcCcH-HHHHHH-HHHhcCC------CCEEEEcCCCccchHHHHH--------
Q 019543 55 PTRDALESLLAKLDK-------ADRALCFTSG-MAALAA-VTHLLGT------GEEIVAGDDLYGGTDRLLS-------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g-------~~~~l~~~sG-~~A~~~-il~ll~~------GD~Vi~~~~~y~~~~~~~~-------- 111 (339)
-.-.+||+.+.+++. ...-++|.+| |+-+.+ +.+|... --.|+...|-|.......+
T Consensus 43 f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~ 122 (363)
T PF04864_consen 43 FISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYK 122 (363)
T ss_dssp TS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEE
T ss_pred eccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcc
Confidence 445789998888764 1357788888 666664 4444221 1257777776665442211
Q ss_pred ----------------------------HHHHH-HHHHcCCEEEEeCCcCCCCCcCcc--cCCCeEEEeccccccccCCC
Q 019543 112 ----------------------------RKIAE-MAHAHGALLLVDNSIMSPVLSRPL--ELGADIVMHSATKFIAGHSD 160 (339)
Q Consensus 112 ----------------------------~~I~~-la~~~g~~livD~a~a~g~~~~~~--~~~~Di~~~S~sK~l~g~~~ 160 (339)
-.|.+ +.+.-+..+|.|=|+-=+++- |+ +..-||..+|+||.- ||++
T Consensus 123 w~Gda~~~~~~~~~~~~IElVTSPNNPDG~lr~~V~~g~~~k~I~D~AYYWPhyT-pI~~~aD~DiMLFT~SK~T-GHAG 200 (363)
T PF04864_consen 123 WAGDASNFKNSDNPSPYIELVTSPNNPDGQLREAVLNGSSGKVIHDLAYYWPHYT-PITAPADHDIMLFTLSKLT-GHAG 200 (363)
T ss_dssp EEEECCCGTT-S-CCGEEEEEESS-TTT------SSTTTEEEEEEE-TT-STTTS----S-B--SEEEEEHHHHC-S-GG
T ss_pred ccccHHhhccCCCCCCeEEEEeCCCCCcccccchhcCCCCcceeeeeeeeccccc-ccCCCCCCceEEEEEeccc-Cccc
Confidence 33332 235556778999887544332 22 234489999999985 5656
Q ss_pred ceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH--------------HHHHHHHHHHHHHHHHHHhCCCC
Q 019543 161 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--------------ALRVEKQQDNAQKIAEFLASHPR 226 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~--------------~~r~~~~~~~a~~l~~~L~~~~~ 226 (339)
.+-||-+.++++..+++..+....+.+.+-....-++..|+.+ .--.+..+++.++|.+.+..-..
T Consensus 201 SR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~r 280 (363)
T PF04864_consen 201 SRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKR 280 (363)
T ss_dssp G-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSS
T ss_pred cccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 6666777788888888888776666676654433222222211 11133445666778888876543
Q ss_pred ceEEecCCCCCCCchHhHhhhcCC-CcceEEEeeC--CHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHH
Q 019543 227 VKKVNYAGLPEHPGHELHYSQAKG-AGSVLSFLTG--SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEV 303 (339)
Q Consensus 227 i~~v~~p~~~~~~~~~~~~~~~~~-~~~ivs~~~~--~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~ 303 (339)
. ..|.+ .|+|.-..+.... ....-|+.-. +..+|.++.+.. +|..+-|.
T Consensus 281 F---SLq~~--~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~---~I~tr~G~-------------------- 332 (363)
T PF04864_consen 281 F---SLQKF--SPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREA---KIITRSGV-------------------- 332 (363)
T ss_dssp E---EE-----SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCT---TEEEEEGG--------------------
T ss_pred e---ecCcC--CchhccccccccCCCCCeEEEecCCcccccHHHHHHhC---CcccCCCC--------------------
Confidence 3 33432 2344333222222 2345566654 234688887654 44434342
Q ss_pred HHhCCCCCCeEEEEec
Q 019543 304 RQARGLTEDLVRISVG 319 (339)
Q Consensus 304 ~~~~g~~~~~lRisvg 319 (339)
.+|.+...+|||+-
T Consensus 333 --~fga~~ryVRlSml 346 (363)
T PF04864_consen 333 --LFGADSRYVRLSML 346 (363)
T ss_dssp --GGTS-TTEEEEESS
T ss_pred --ccCCCCCeEEEecc
Confidence 13446688999985
No 373
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.17 E-value=1.3e-05 Score=74.75 Aligned_cols=161 Identities=18% Similarity=0.263 Sum_probs=98.4
Q ss_pred HHHHHHHHhHh---CCCeEEEcCcHHHHHHHHHHh----c---CCCC--EEEEcCCCccchH-HHHH-------------
Q 019543 58 DALESLLAKLD---KADRALCFTSGMAALAAVTHL----L---GTGE--EIVAGDDLYGGTD-RLLS------------- 111 (339)
Q Consensus 58 ~~le~~la~~~---g~~~~l~~~sG~~A~~~il~l----l---~~GD--~Vi~~~~~y~~~~-~~~~------------- 111 (339)
-.+++.+.+.. ..+.+.+++||+.|+.+.+.+ . .|-+ .||.-...|+|-. ..+.
T Consensus 101 v~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p 180 (433)
T KOG1401|consen 101 VELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDP 180 (433)
T ss_pred HHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCC
Confidence 35566666666 567899999999999754321 1 1222 2787777776521 1111
Q ss_pred -------------------------------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCc----
Q 019543 112 -------------------------------------------------RKIAEMAHAHGALLLVDNSIM-SPVLS---- 137 (339)
Q Consensus 112 -------------------------------------------------~~I~~la~~~g~~livD~a~a-~g~~~---- 137 (339)
..|.++|+++|+++|.||.+- .|-.+
T Consensus 181 ~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a 260 (433)
T KOG1401|consen 181 IAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWA 260 (433)
T ss_pred CCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHH
Confidence 889999999999999999973 22221
Q ss_pred -CcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh-cC--CCCChHHHHHHHhchhhH--HHHHHHHH
Q 019543 138 -RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EG--SGLAPFDCWICLRGVKTM--ALRVEKQQ 211 (339)
Q Consensus 138 -~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~-~~--~~~~~~~a~~~~~~l~~~--~~r~~~~~ 211 (339)
.-+....||.+ +.|.|+|. ...|+..+++ ++.+.+..-..+ .| .+-+|+.+..+...|+.+ ++.+++..
T Consensus 261 ~e~~~~~PDI~t--~aK~L~gG--lPigA~~v~~-kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs 335 (433)
T KOG1401|consen 261 QEYFGVTPDITT--VAKPLGGG--LPIGATGVRD-KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVS 335 (433)
T ss_pred HHHhCcCCccee--ehhhccCC--ceeEEEeehH-HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHH
Confidence 12233457655 68999964 4556666664 565655432211 12 334677777777777765 44555555
Q ss_pred HHHHHHHHHHhC
Q 019543 212 DNAQKIAEFLAS 223 (339)
Q Consensus 212 ~~a~~l~~~L~~ 223 (339)
+..+.|++.+.+
T Consensus 336 ~~~k~L~~~l~e 347 (433)
T KOG1401|consen 336 KIGKELRKLLDE 347 (433)
T ss_pred HHHHHHHHHHHH
Confidence 555566555543
No 374
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=97.97 E-value=0.0023 Score=59.99 Aligned_cols=236 Identities=16% Similarity=0.143 Sum_probs=112.0
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHH--HHH-H-h---cC---C-----CCEEEEcCCCccchHHHHH------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA--AVT-H-L---LG---T-----GEEIVAGDDLYGGTDRLLS------ 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~--~il-~-l---l~---~-----GD~Vi~~~~~y~~~~~~~~------ 111 (339)
.-..++++.+|+++|.+ +.++..+..-.++ ++. + + .. | .=..+|+.|.|+....+.+
T Consensus 69 ~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Giem 148 (425)
T PF12897_consen 69 DGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIEM 148 (425)
T ss_dssp S--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-EE
T ss_pred CChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcEE
Confidence 45668999999999975 5666555544432 222 1 1 11 1 2258899999987765554
Q ss_pred -----------------------------------------------HHHHHH-HHHcCCEEEEeCCcCCCCCc-C-c--
Q 019543 112 -----------------------------------------------RKIAEM-AHAHGALLLVDNSIMSPVLS-R-P-- 139 (339)
Q Consensus 112 -----------------------------------------------~~I~~l-a~~~g~~livD~a~a~g~~~-~-~-- 139 (339)
++++++ +...+..++.|+||+...+. + +
T Consensus 149 i~VpM~~dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~ 228 (425)
T PF12897_consen 149 IPVPMTEDGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRD 228 (425)
T ss_dssp EEEEEETTEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS--
T ss_pred EecCCCCCCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccch
Confidence 455555 23579999999999877652 1 1
Q ss_pred -----cc----C-CCe--EEEecccccc-ccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHH---HHhchh-h
Q 019543 140 -----LE----L-GAD--IVMHSATKFI-AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI---CLRGVK-T 202 (339)
Q Consensus 140 -----~~----~-~~D--i~~~S~sK~l-~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~---~~~~l~-~ 202 (339)
+. . ..| +...|.||.- .|.| .+++.++.+ -++.++......+.+..-++... -....+ .
T Consensus 229 ~~~nil~~~~~AGnpdrv~~F~STSKITf~GaG---va~~aaS~~-Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d~~gG 304 (425)
T PF12897_consen 229 ALLNILDACAKAGNPDRVYVFASTSKITFPGAG---VAFFAASEA-NLAWIKKHLSVQTIGPDKVNQLRHVRFFKDAEGG 304 (425)
T ss_dssp ----HHHHHHHTT-TTSEEEEEESTTTS-TTSS----EEEEE-HH-HHHHHHHHHHHH-S---HHHHHHHHHHHHSHHTH
T ss_pred hhhHHHHHHHHcCCCCeEEEEecccccccCCcc---eeeeecCHH-HHHHHHHHhcCceeCccHHHHHHHHHHhcChhhH
Confidence 00 0 112 7778999964 4322 467877754 34444443333333333333221 122222 3
Q ss_pred HHHHHHHHHHH--------HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCc
Q 019543 203 MALRVEKQQDN--------AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY 274 (339)
Q Consensus 203 ~~~r~~~~~~~--------a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~ 274 (339)
+...++++.+. .+.|.+.|..-.++-.+..|. .|..|||.+.+. .++++++..++
T Consensus 305 v~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~----------------GGYFIsld~~~G-~AkrvV~lake 367 (425)
T PF12897_consen 305 VRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPK----------------GGYFISLDVLDG-TAKRVVELAKE 367 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---S----------------BSS-EEEEESTT--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCC----------------CceEEEEecCCC-hHHHHHHHHHH
Confidence 33333333322 234444555222455555552 467899986332 35667776777
Q ss_pred ceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHH
Q 019543 275 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLIS 328 (339)
Q Consensus 275 ~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~ 328 (339)
.|+.....+ .++|+-- ...++-|||..++...+++-.
T Consensus 368 AGV~LT~AG----AtfPyg~-------------DP~D~nIRiAPS~P~leel~~ 404 (425)
T PF12897_consen 368 AGVALTPAG----ATFPYGK-------------DPRDSNIRIAPSYPSLEELET 404 (425)
T ss_dssp TTEE---TT----TTSGGG---------------TTS-EEEE--SSS-HHHHHH
T ss_pred hCceeCCCC----CCCCCCC-------------CCCCCcEEecCCCCCHHHHHH
Confidence 788765422 1244310 014678999999988877533
No 375
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=97.95 E-value=0.0033 Score=63.50 Aligned_cols=110 Identities=18% Similarity=0.216 Sum_probs=70.4
Q ss_pred HHHHHHH---HHcCC--EEEEeCCcCCCC---CcC-------------------------------------cccCCCeE
Q 019543 112 RKIAEMA---HAHGA--LLLVDNSIMSPV---LSR-------------------------------------PLELGADI 146 (339)
Q Consensus 112 ~~I~~la---~~~g~--~livD~a~a~g~---~~~-------------------------------------~~~~~~Di 146 (339)
++|+++| +++|+ ++.||+|+|... +.+ .+ ..+|-
T Consensus 298 ~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gl-e~ADS 376 (608)
T TIGR03811 298 DKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAI-SEAES 376 (608)
T ss_pred HHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcC-cCceE
Confidence 8898888 77898 699999997532 111 01 25788
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh-----------------cCCCCC--hHHHHHHHhc----hhhH
Q 019543 147 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-----------------EGSGLA--PFDCWICLRG----VKTM 203 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~-----------------~~~~~~--~~~a~~~~~~----l~~~ 203 (339)
++..+||++.-| ..+|+++.++..+.+.+.....+ .|.... .+..|+..+. .+.+
T Consensus 377 ItvDpHK~g~~P--y~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gy 454 (608)
T TIGR03811 377 VTIDPHKMGYIP--YSAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGY 454 (608)
T ss_pred EEeCcccccccC--CCeEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHH
Confidence 899999998865 44677778876544433221111 111111 2334444433 3457
Q ss_pred HHHHHHHHHHHHHHHHHHhCC
Q 019543 204 ALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 204 ~~r~~~~~~~a~~l~~~L~~~ 224 (339)
.+.+.+..++++++.+.|+..
T Consensus 455 g~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 455 GKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 788888889999999999874
No 376
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.87 E-value=0.0027 Score=60.05 Aligned_cols=110 Identities=32% Similarity=0.398 Sum_probs=75.2
Q ss_pred HHHHHHHHhHhCCC--eEEEcCcHHHHHHH-HHH--hcC-CCCEEEEcCCCccchHHHHH--------------------
Q 019543 58 DALESLLAKLDKAD--RALCFTSGMAALAA-VTH--LLG-TGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 58 ~~le~~la~~~g~~--~~l~~~sG~~A~~~-il~--ll~-~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
-+++..++++.|-+ ++-+.-.++++-.+ .++ .-+ +...++++..+++.+..+++
T Consensus 123 fefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~ 202 (450)
T COG0403 123 FEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDD 202 (450)
T ss_pred HHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhh
Confidence 45666778888865 45555666655543 332 333 25788888888777665544
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeC-CcCCCCCcCcccCCCeEEEecccc-----ccccC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDN-SIMSPVLSRPLELGADIVMHSATK-----FIAGH 158 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~-a~a~g~~~~~~~~~~Di~~~S~sK-----~l~g~ 158 (339)
++|.+.+|++|+++++=. --+.+....|-++|+||++++.+. .||||
T Consensus 203 l~~~~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGP 282 (450)
T COG0403 203 LESADDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGP 282 (450)
T ss_pred hhhccccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCCc
Confidence 788999999998777643 334556666778999999999764 45554
Q ss_pred CCceEEEEEEcC
Q 019543 159 SDVMAGVLAVKG 170 (339)
Q Consensus 159 ~~~~gG~v~~~~ 170 (339)
-.|+..+++
T Consensus 283 ---hag~fA~~~ 291 (450)
T COG0403 283 ---HAGYFAVKD 291 (450)
T ss_pred ---ceeeeeEhH
Confidence 468888875
No 377
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.82 E-value=0.00075 Score=70.51 Aligned_cols=115 Identities=22% Similarity=0.208 Sum_probs=77.0
Q ss_pred hHHHHHHHHHhHhCCC--eEEEcCcHHHHHHH-HHH--hcC-CCCEEEEcCCCccchHHHHH------------------
Q 019543 56 TRDALESLLAKLDKAD--RALCFTSGMAALAA-VTH--LLG-TGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~--~~l~~~sG~~A~~~-il~--ll~-~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
..-+++..++++.|-+ ++-+.-.++++-.+ .++ ..+ ...+|++++..++.+..+++
T Consensus 125 al~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~~~~~~~ 204 (954)
T PRK12566 125 ALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVVDAVDNL 204 (954)
T ss_pred HHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEEcchhhc
Confidence 3456778889999876 55666677665443 222 222 24678888888777665444
Q ss_pred ----------------------HHHHHHHHHcCCEEEEeCCc--CCCCCcCcccCCCeEEEeccc-----cccccCCCce
Q 019543 112 ----------------------RKIAEMAHAHGALLLVDNSI--MSPVLSRPLELGADIVMHSAT-----KFIAGHSDVM 162 (339)
Q Consensus 112 ----------------------~~I~~la~~~g~~livD~a~--a~g~~~~~~~~~~Di~~~S~s-----K~l~g~~~~~ 162 (339)
++|.+++|++|++++ +.+- +.+.+..|-++|+||++++.. =.+||| -
T Consensus 205 ~~~~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~-~~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP---~ 280 (954)
T PRK12566 205 AAHAVFGALLQYPDTHGEIRDLRPLIDQLHGQQALAC-VAADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGP---H 280 (954)
T ss_pred CCCCEEEEEEECCCCceEEccHHHHHHHHHHcCCEEE-EEeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCC---C
Confidence 889999999999866 4332 455666777899999998643 234443 4
Q ss_pred EEEEEEcChhHHH
Q 019543 163 AGVLAVKGERLAK 175 (339)
Q Consensus 163 gG~v~~~~~~l~~ 175 (339)
.|++++++ ++..
T Consensus 281 ag~~a~~~-~~~R 292 (954)
T PRK12566 281 AAYFACRD-DYKR 292 (954)
T ss_pred eeeeeehH-HHHh
Confidence 78998875 4443
No 378
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.73 E-value=0.001 Score=63.29 Aligned_cols=144 Identities=20% Similarity=0.318 Sum_probs=84.0
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCc--------CcccCCCeEEEeccccccccCCCceEEEEEEcChh-H-----HHHH
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLS--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-L-----AKEL 177 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~--------~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~-l-----~~~l 177 (339)
.+|..+|+++|++|.||+||+...+. ++++ .+|-+.+..||++--+-+ ...++.++.. + .+.+
T Consensus 255 ~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie-~aDSfn~n~hK~~~vnfD--Cs~lWvkd~~~~~~~~~vdp~ 331 (511)
T KOG0628|consen 255 EELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIE-YADSFNFNPHKWLLVNFD--CSPLWVKDGTKLSRAFNVDPL 331 (511)
T ss_pred HHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcch-hhccccCChhheeEEeee--eecceeecCceeeeeeecChH
Confidence 89999999999999999999754432 2233 256666777898765433 2334333321 0 0111
Q ss_pred HHHHHh-------------cCCCCChHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchH
Q 019543 178 YFLQNA-------------EGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 242 (339)
Q Consensus 178 ~~~~~~-------------~~~~~~~~~a~~~~~--~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~ 242 (339)
...... .|-..-.+-.|..++ +.+.++.+++++.+.++.+-+.+.+-+..+.++-.
T Consensus 332 yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~--------- 402 (511)
T KOG0628|consen 332 YLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKR--------- 402 (511)
T ss_pred hhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccc---------
Confidence 100000 111111223344333 45777888888888888777777766654433322
Q ss_pred hHhhhcCCCcceEEEee-CCHHHHHHHHccCCcc
Q 019543 243 LHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYF 275 (339)
Q Consensus 243 ~~~~~~~~~~~ivs~~~-~~~~~~~~~~~~L~~~ 275 (339)
.=+++.|.+ +++....++.+++...
T Consensus 403 --------~lgLvcFRlk~~N~~ne~Ll~~in~~ 428 (511)
T KOG0628|consen 403 --------ILGLVCFRLKGDNEINEALLNRLNSS 428 (511)
T ss_pred --------ccceeEEeecCCcHHHHHHHHHHHhc
Confidence 236899987 4555667788887653
No 379
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.41 E-value=0.003 Score=57.12 Aligned_cols=182 Identities=16% Similarity=0.201 Sum_probs=95.9
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCc------ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH-Hh
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSRP------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NA 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~~------~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-~~ 183 (339)
+++++..+.+|-..|.|+++ ++|-.++. ..+-.||++ +.|.+|-. --.+.+++.+ ++.+.+.... .+
T Consensus 233 q~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVt--mgKpmGNG--hPVa~Vattk-eIA~Af~atgv~Y 307 (452)
T KOG1403|consen 233 QAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVT--MGKPMGNG--HPVAAVATTK-EIAQAFHATGVEY 307 (452)
T ss_pred HHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchhe--ecccCCCC--CeeeEEeccH-HHHHHhcccccee
Confidence 88889999999999999998 44433221 122336664 68998732 2245666654 5655554311 12
Q ss_pred c-CCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHH----HhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEe
Q 019543 184 E-GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEF----LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 258 (339)
Q Consensus 184 ~-~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~----L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~ 258 (339)
+ +.+-+|..++.++.-|+..+ -+.+.++++++-++ |+.+.. .++-+.+ .+|.|-.+-+.
T Consensus 308 FNTyGGnPVsCAv~laVm~v~e--~E~Lq~ha~~vG~~L~~lL~~~k~----kh~~IGD----------vRGvGLFiGId 371 (452)
T KOG1403|consen 308 FNTYGGNPVSCAVGLAVMRVCE--DENLQEHAQQVGEKLEVLLRRLKQ----KHECIGD----------VRGVGLFIGID 371 (452)
T ss_pred hhccCCCchhHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHhh----hccceec----------cccceEEEeee
Confidence 2 34557888877776665442 12223333333333 332210 1111100 14455555565
Q ss_pred e-CC-------HHHHHHHHccCCc-ceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHH
Q 019543 259 T-GS-------LALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISD 329 (339)
Q Consensus 259 ~-~~-------~~~~~~~~~~L~~-~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~ 329 (339)
+ .+ ...+..++.+|++ +++..|.-+...-+. .+.+ -.++..|+.++.+..
T Consensus 372 LVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~Nil------------------KiKP---PmCFneena~e~v~~ 430 (452)
T KOG1403|consen 372 LVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNIL------------------KIKP---PMCFNEENADEFVLG 430 (452)
T ss_pred eecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCCCcee------------------ecCC---CcccChhhHHHHHHH
Confidence 3 22 2335566777755 556666433222111 1122 246777888877777
Q ss_pred HHHHHh
Q 019543 330 LDKALR 335 (339)
Q Consensus 330 l~~al~ 335 (339)
|.+.|.
T Consensus 431 ld~iLT 436 (452)
T KOG1403|consen 431 LDEILT 436 (452)
T ss_pred HHHHHH
Confidence 777664
No 380
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=97.39 E-value=0.014 Score=55.47 Aligned_cols=122 Identities=22% Similarity=0.268 Sum_probs=79.2
Q ss_pred chHHHHHHHHHhHhCCCeEEEcC-cHHH----HHHHHHH-hcCC----CCEEEEcCCCccchH---HHHH----------
Q 019543 55 PTRDALESLLAKLDKADRALCFT-SGMA----ALAAVTH-LLGT----GEEIVAGDDLYGGTD---RLLS---------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~-sG~~----A~~~il~-ll~~----GD~Vi~~~~~y~~~~---~~~~---------- 111 (339)
....+||++|.+..|-+.+-+.+ +|.+ ++.+|-+ .-.. .+++++++...+.+. .+..
T Consensus 109 ~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~ 188 (496)
T COG1003 109 ELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDE 188 (496)
T ss_pred HHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCC
Confidence 35678999999999987655544 5543 3333333 2223 357888887544332 1110
Q ss_pred -----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC--cCcccCCCeEEEeccccc
Q 019543 112 -----------------------------------RKIAEMAHAHGALLLVDNSIMSPVL--SRPLELGADIVMHSATKF 154 (339)
Q Consensus 112 -----------------------------------~~I~~la~~~g~~livD~a~a~g~~--~~~~~~~~Di~~~S~sK~ 154 (339)
.+|+++.|++|..|..|.|---... .+|-..|+||+-.-++|+
T Consensus 189 ~G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNLHKT 268 (496)
T COG1003 189 NGNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNLHKT 268 (496)
T ss_pred CCCccHHHHHHHhccceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEeecccc
Confidence 8899999999999999998633322 356667999999999999
Q ss_pred cccC---CCceEEEEEEcChhHHHHH
Q 019543 155 IAGH---SDVMAGVLAVKGERLAKEL 177 (339)
Q Consensus 155 l~g~---~~~~gG~v~~~~~~l~~~l 177 (339)
|+.| |+...|-|.++ +.+...+
T Consensus 269 F~iPHGGGGPG~GPvgVk-~~L~pfL 293 (496)
T COG1003 269 FCIPHGGGGPGAGPVGVK-AHLAPFL 293 (496)
T ss_pred cccCCCCCCCCCCceehH-hhccccC
Confidence 9855 33334556554 3444433
No 381
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.35 E-value=0.028 Score=52.33 Aligned_cols=171 Identities=21% Similarity=0.187 Sum_probs=98.0
Q ss_pred cccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcCCCC-----EEEEcCCCccch-HHH-----------
Q 019543 48 DYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLGTGE-----EIVAGDDLYGGT-DRL----------- 109 (339)
Q Consensus 48 ~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~~GD-----~Vi~~~~~y~~~-~~~----------- 109 (339)
.|+ ++.....|++...+.+|-+..+=+.-|-.|=..+.. ++++|+ ..++.++.|..+ ...
T Consensus 74 AYa--gsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~ 151 (471)
T COG3033 74 AYA--GSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNV 151 (471)
T ss_pred hhc--ccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCccccc
Confidence 455 566778899999999999988888999777554332 445444 333344433322 111
Q ss_pred --------------------------HH-----------------------------HHHHHHHHHcCCEEEEeCCcCC-
Q 019543 110 --------------------------LS-----------------------------RKIAEMAHAHGALLLVDNSIMS- 133 (339)
Q Consensus 110 --------------------------~~-----------------------------~~I~~la~~~g~~livD~a~a~- 133 (339)
+. ++..++|++|+++++.|.+--.
T Consensus 152 ~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaE 231 (471)
T COG3033 152 YVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAE 231 (471)
T ss_pred cccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhh
Confidence 10 9999999999999999987521
Q ss_pred C-CCc---------Ccc-------cCCCeEEEeccccc-cccCCCceEEEEEEcChh---HHHHHHHHHHh-cC----CC
Q 019543 134 P-VLS---------RPL-------ELGADIVMHSATKF-IAGHSDVMAGVLAVKGER---LAKELYFLQNA-EG----SG 187 (339)
Q Consensus 134 g-~~~---------~~~-------~~~~Di~~~S~sK~-l~g~~~~~gG~v~~~~~~---l~~~l~~~~~~-~~----~~ 187 (339)
- ++. ..+ -..+|-.+-|.-|= +. -+||+++.+++. +...++...-. .| .+
T Consensus 232 NaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lv----nmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGg 307 (471)
T COG3033 232 NAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLV----NMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGG 307 (471)
T ss_pred hhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccccee----ccccEEEecCccHHHHHHHHHhheEeeccccccCc
Confidence 1 111 000 01346666677663 32 478999999874 44444443211 11 23
Q ss_pred CChHHHHHHHhchhh-H-HHHHHHHHHHHHHHHHHHhCC
Q 019543 188 LAPFDCWICLRGVKT-M-ALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 188 ~~~~~a~~~~~~l~~-~-~~r~~~~~~~a~~l~~~L~~~ 224 (339)
|+--+...+..+|.. + ...++.+-+..++|.+.|.+.
T Consensus 308 l~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~ 346 (471)
T COG3033 308 LAGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGLEEA 346 (471)
T ss_pred ccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 333222222223322 1 223444445567888888875
No 382
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.35 E-value=0.0014 Score=60.41 Aligned_cols=147 Identities=15% Similarity=0.196 Sum_probs=80.8
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCc-------CcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLS-------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~-------~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~ 183 (339)
+.|.++++|||+.+||||++. .|.-+ -.+....|+++ |||-|- .||+.. ++++... ..++.+
T Consensus 295 ~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vT--FSKK~q-----~gGffh--~~~frpn-~pYrif 364 (484)
T KOG1405|consen 295 RKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVT--FSKKFQ-----TGGFFH--DEEFRPN-EPYRIF 364 (484)
T ss_pred HHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCcccee--hhhhhh-----cCcccc--CcccCCC-chHHHh
Confidence 889999999999999999983 22222 12444567765 677775 256654 3233211 112222
Q ss_pred cCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC
Q 019543 184 EGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 261 (339)
Q Consensus 184 ~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~ 261 (339)
-+++=.|.-..++...++.+. ..+.+...--+.|...|.++. -.||+.-+ ..+|.|..+++...+
T Consensus 365 NTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq----~~~p~~~~---------~~RGrGTF~a~d~ps 431 (484)
T KOG1405|consen 365 NTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQ----AKYPGKIN---------NLRGRGTFIAWDCPS 431 (484)
T ss_pred hhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH----HhCchhhh---------cccccceEEEEeCCC
Confidence 233334544444433333331 122222233344444444331 12454211 136788899999877
Q ss_pred HHHHHHHHccCCcceeecccCC
Q 019543 262 LALSKHVVETTKYFSITVSFGS 283 (339)
Q Consensus 262 ~~~~~~~~~~L~~~~i~v~~G~ 283 (339)
......|+..++..| +..|+
T Consensus 432 ~~~Rdk~i~~~~~nG--v~~GG 451 (484)
T KOG1405|consen 432 GSIRDKLILIARLNG--VNLGG 451 (484)
T ss_pred hHHHHHHHHHHHHcC--ceecc
Confidence 777788888877654 45565
No 383
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=97.08 E-value=0.013 Score=54.86 Aligned_cols=181 Identities=17% Similarity=0.204 Sum_probs=99.1
Q ss_pred CcccCCCCchHHHHHHHHHhHhCC----CeEEEcCcHHHHHHHHHHh--cCCCCEEEEcCC---CccchHHHHH------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKA----DRALCFTSGMAALAAVTHL--LGTGEEIVAGDD---LYGGTDRLLS------ 111 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~----~~~l~~~sG~~A~~~il~l--l~~GD~Vi~~~~---~y~~~~~~~~------ 111 (339)
|+-|++-.-.++...+.+.+.-|- ++..++++...|+..++.+ -.+.|-|+++-| +|.++...+.
T Consensus 109 YS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v~Y 188 (475)
T KOG0258|consen 109 YSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQVPY 188 (475)
T ss_pred cccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCcccce
Confidence 444444333344444444444441 2455555558888776663 457788998876 4444443222
Q ss_pred -------------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC------
Q 019543 112 -------------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL------ 136 (339)
Q Consensus 112 -------------------------------------------------~~I~~la~~~g~~livD~a~a~g~~------ 136 (339)
++|...|+++|+.|+-|+++---++
T Consensus 189 yLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skF 268 (475)
T KOG0258|consen 189 YLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKF 268 (475)
T ss_pred eeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcch
Confidence 8999999999999999998732221
Q ss_pred ----------cCcccCCC-eEEEeccccccccCCCceEEEEEE--cChhHHHHHHHHHH--h----cC-----CCCChH-
Q 019543 137 ----------SRPLELGA-DIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQN--A----EG-----SGLAPF- 191 (339)
Q Consensus 137 ----------~~~~~~~~-Di~~~S~sK~l~g~~~~~gG~v~~--~~~~l~~~l~~~~~--~----~~-----~~~~~~- 191 (339)
+++..... -+..+|.||.+.|..+-+||++=. .+++..+.+..+.. . .| ..++|-
T Consensus 269 hSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~ 348 (475)
T KOG0258|consen 269 HSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPK 348 (475)
T ss_pred HhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCC
Confidence 11111111 255577899999887788888633 22233333332221 0 01 111110
Q ss_pred ---HHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 192 ---DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 192 ---~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
..+-.. ...-+.-+..++..++.+.+.++..++|++
T Consensus 349 Pgd~Sy~~~--~~Ekd~il~~l~~ra~l~~~~~ns~~gi~c 387 (475)
T KOG0258|consen 349 PGDPSYDLF--SSEKDGILSSLRSRAKLTEDAFNSLEGISC 387 (475)
T ss_pred CCCcchhhh--hhhhHhHHHHHHHHhHHHHHHHhhcCceee
Confidence 011000 011233355566677888889999998764
No 384
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.06 E-value=0.018 Score=53.71 Aligned_cols=149 Identities=19% Similarity=0.219 Sum_probs=85.3
Q ss_pred CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH--H---H----hc-C--CCCChHHHH-HH---Hhchhh---HH
Q 019543 144 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--Q---N----AE-G--SGLAPFDCW-IC---LRGVKT---MA 204 (339)
Q Consensus 144 ~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~--~---~----~~-~--~~~~~~~a~-~~---~~~l~~---~~ 204 (339)
.|++.++..|.+|+.| -++++.++ ++.+++... . + .. + ...+|..++ +. ...++. ++
T Consensus 191 ~dviyagaQKnlGpaG---ltvvIvr~-~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~ 266 (365)
T COG1932 191 YDVIYAGAQKNLGPAG---LTVVIVRP-DLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLE 266 (365)
T ss_pred cceEEEehhhccCccc---eEEEEEcH-HHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHH
Confidence 4799999999999654 46777775 666666542 0 1 11 1 222343332 22 222222 34
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCc
Q 019543 205 LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSV 284 (339)
Q Consensus 205 ~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~ 284 (339)
...++..++++.|.+++.+.+..+...-|. .++ --.++|.+.+.+-...|+..+...|...--|
T Consensus 267 ~~~~rn~~ka~~LY~~id~s~fy~~~v~~~-------------~RS-~mnV~f~~~~~~ld~~fv~eae~~gl~~lkG-- 330 (365)
T COG1932 267 ALEARNQAKAQLLYDWIDKSDFYRNLVAKA-------------NRS-RMNVTFTLVDAELDKGFVAEAEAAGLIYLKG-- 330 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccccchh-------------hcc-ceeEEEEcCcHHHHHHHHHHHHHcCCceecc--
Confidence 555666688999999999876433211111 122 2357777776666677887776655433222
Q ss_pred ccceeccccccCCCCCHHHHHhCCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Q 019543 285 KSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 335 (339)
Q Consensus 285 ~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~----e~~~~li~~l~~al~ 335 (339)
|+. ..+ +|+|++- |+.+.|++-+.+..+
T Consensus 331 -----------hr~-----------vgG-mRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 331 -----------HRS-----------VGG-LRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred -----------ccC-----------CCc-eeeeeecCCCHHHHHHHHHHHHHHHH
Confidence 111 223 8999974 666777666666544
No 385
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.04 E-value=0.0015 Score=54.22 Aligned_cols=53 Identities=17% Similarity=0.212 Sum_probs=39.1
Q ss_pred CCchHHHHHHHHHhHhC------CCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccc
Q 019543 53 GNPTRDALESLLAKLDK------ADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGG 105 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g------~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~ 105 (339)
....++++.+.+.+.+| .+++++++++++|+..+ ..++.|||.|++++|.|++
T Consensus 94 ~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 94 LANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 33456666666666655 23677777778999864 4589999999999999975
No 386
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=96.70 E-value=0.018 Score=54.50 Aligned_cols=65 Identities=15% Similarity=0.088 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCC------cCcccC-CCeEEEeccccccccCCCceEEEEEEcChhHHHHHH
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVL------SRPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 178 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~------~~~~~~-~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~ 178 (339)
++|+++|++||++.++-+||+.=.. .+.... ..|+.+.|+.|-|--| +.|+.+++.++..+..+.
T Consensus 175 ~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VP--vGgai~As~~~~~i~~vs 246 (389)
T PF05889_consen 175 EEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVP--VGGAIMASFDPSGILAVS 246 (389)
T ss_dssp HHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEE--SSHEEEEESSHHHHHHHH
T ss_pred HHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEec--CCCcEEEecCHHHHHHHH
Confidence 8999999999999999999976111 011111 4689999999988754 235566666655554443
No 387
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=96.17 E-value=0.035 Score=53.26 Aligned_cols=182 Identities=15% Similarity=0.199 Sum_probs=102.1
Q ss_pred HHHHHHHHH-cCCEEEEeCCcCCCCC--c--CcccCCC-e----EEEeccccccccCCCceEEEEEEcChhH-HHHHHHH
Q 019543 112 RKIAEMAHA-HGALLLVDNSIMSPVL--S--RPLELGA-D----IVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYFL 180 (339)
Q Consensus 112 ~~I~~la~~-~g~~livD~a~a~g~~--~--~~~~~~~-D----i~~~S~sK~l~g~~~~~gG~v~~~~~~l-~~~l~~~ 180 (339)
++|.++.-+ +++++.+|.+-|..+. + ...+++. + -...+.+||=-.+.+ .+ +++.+++++ .+.+...
T Consensus 238 e~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G-~~-~vl~r~k~~~~~q~~~~ 315 (491)
T KOG1383|consen 238 EKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAG-SS-WVLYRNKELLPHQLFFH 315 (491)
T ss_pred HHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCceeEeeccceeeeeecC-cE-EEEEcccccccceEEEe
Confidence 899999988 9999999999765443 1 1112211 1 222346787433322 24 444444333 2222111
Q ss_pred HHhcCC----------CCC--hHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhh
Q 019543 181 QNAEGS----------GLA--PFDCWICL--RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 246 (339)
Q Consensus 181 ~~~~~~----------~~~--~~~a~~~~--~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~ 246 (339)
.+..|. ..+ -..+|..+ -+-+-..+..++..++++.+.+.+++.+++..+.-
T Consensus 316 ~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk-------------- 381 (491)
T KOG1383|consen 316 TDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK-------------- 381 (491)
T ss_pred ccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC--------------
Confidence 111121 111 12334333 34456778888999999999999999877643322
Q ss_pred hcCCCcceEEEee-CCH-HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHH
Q 019543 247 QAKGAGSVLSFLT-GSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVN 324 (339)
Q Consensus 247 ~~~~~~~ivs~~~-~~~-~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~ 324 (339)
+.++|.. +.. -...++.+.|+.+|..++- ...|+ ..| -..+|+.+-.+-.+
T Consensus 382 ------p~vs~~~~~s~~~~i~elsd~l~~~GW~lna------lq~P~-a~H--------------i~vt~~~~~~~~A~ 434 (491)
T KOG1383|consen 382 ------PLVSFILFGSNDVNIFELSDLLRKKGWILNA------LQFPA-AIH--------------ICVTRVHAREDVAD 434 (491)
T ss_pred ------CcEEEEEccCCccchhhhhHHHHhcCcCccc------cCCCC-ceE--------------EEEEeeeccHHHHH
Confidence 4566664 322 3356777888777654431 12232 111 13466666655578
Q ss_pred HHHHHHHHHHhc
Q 019543 325 DLISDLDKALRT 336 (339)
Q Consensus 325 ~li~~l~~al~~ 336 (339)
+++.|+.+++++
T Consensus 435 ~~v~Di~~~~~e 446 (491)
T KOG1383|consen 435 RFVADIRKVVEE 446 (491)
T ss_pred HHHHHHHHHHHH
Confidence 889999988865
No 388
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=95.79 E-value=0.19 Score=46.06 Aligned_cols=67 Identities=16% Similarity=0.161 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCCEEEEeCCc---CCCCCcC-------cccCCC-eEEEeccccccccCCCceEEE-EEEcChhHHHHHH
Q 019543 112 RKIAEMAHAHGALLLVDNSI---MSPVLSR-------PLELGA-DIVMHSATKFIAGHSDVMAGV-LAVKGERLAKELY 178 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~---a~g~~~~-------~~~~~~-Di~~~S~sK~l~g~~~~~gG~-v~~~~~~l~~~l~ 178 (339)
.+|+++-++.+...+.|-++ ++|-..+ ....|. -+++.||+|.+|..+.+.|-+ ++.+++..+..+.
T Consensus 201 ~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~ 279 (410)
T KOG1412|consen 201 KQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVK 279 (410)
T ss_pred HHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHH
Confidence 78999999999999999997 3332211 012233 388899999999887776655 3345545555444
No 389
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=95.43 E-value=0.089 Score=48.75 Aligned_cols=107 Identities=18% Similarity=0.196 Sum_probs=72.4
Q ss_pred EEcCcHHHHHH--H-HHHhcCCCCEEEEcCCCccchHHHHH---------------------------------------
Q 019543 74 LCFTSGMAALA--A-VTHLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------- 111 (339)
Q Consensus 74 l~~~sG~~A~~--~-il~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------- 111 (339)
+-+-||+.|+- + +++..-|+-.|.+++|+|+.....+.
T Consensus 124 vQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilL 203 (427)
T KOG1411|consen 124 VQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILL 203 (427)
T ss_pred EEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEe
Confidence 34568888874 2 55655678889999998875433222
Q ss_pred -----------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc----------ccCCCe-EEEeccccccccCCCceE
Q 019543 112 -----------------RKIAEMAHAHGALLLVDNSIMSPVLSRP----------LELGAD-IVMHSATKFIAGHSDVMA 163 (339)
Q Consensus 112 -----------------~~I~~la~~~g~~livD~a~a~g~~~~~----------~~~~~D-i~~~S~sK~l~g~~~~~g 163 (339)
++|.++-++.+..-+.|-++-....++. .+.|.. +++.|+.|.+|-.|...|
T Consensus 204 haCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvG 283 (427)
T KOG1411|consen 204 HACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVG 283 (427)
T ss_pred ehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccc
Confidence 8899999999999999998743222221 122333 677899999998777766
Q ss_pred EE-EEEcChhHHHHHHHH
Q 019543 164 GV-LAVKGERLAKELYFL 180 (339)
Q Consensus 164 G~-v~~~~~~l~~~l~~~ 180 (339)
.+ |++.+++...++...
T Consensus 284 a~svvc~~ad~A~rV~SQ 301 (427)
T KOG1411|consen 284 ALSVVCKDADEAKRVESQ 301 (427)
T ss_pred eeEEEecCHHHHHHHHHH
Confidence 66 566766666655543
No 390
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=95.01 E-value=0.066 Score=50.90 Aligned_cols=116 Identities=17% Similarity=0.265 Sum_probs=75.9
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcC--------cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH-
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSR--------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN- 182 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~--------~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~- 182 (339)
..|+++|++|++++.||+|++.|..-. .++ .+|-+.-+-+|.+|.+ ...+..+.+.+.+.++..++..
T Consensus 273 ~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Gie-ra~SvtwnpHK~~gap--lqCsa~l~r~~gll~~Cn~~~A~ 349 (510)
T KOG0629|consen 273 NGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIE-RANSVTWNPHKLMGAP--LQCSAFLTREEGLLQRCNQMSAI 349 (510)
T ss_pred HHHHHHHHhcCEEEEeecccccccccChhhHhhccCcc-ccCceeecHHHhhcCc--chhhHHHHHHHHHHHhhcccchh
Confidence 899999999999999999998876522 112 3566777789999854 4555555554444333322211
Q ss_pred -------h------c-------CCCCChHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHHhCCCCceEE
Q 019543 183 -------A------E-------GSGLAPFDCWICL--RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKV 230 (339)
Q Consensus 183 -------~------~-------~~~~~~~~a~~~~--~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v 230 (339)
. + |-..+-+--|+.. ++-+-++.++++.-++|+++.+.+++.++...+
T Consensus 350 YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l 419 (510)
T KOG0629|consen 350 YLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEML 419 (510)
T ss_pred hhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceeh
Confidence 0 0 1122333345543 345667888999999999999999988764443
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=94.30 E-value=1 Score=45.40 Aligned_cols=58 Identities=28% Similarity=0.417 Sum_probs=41.3
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCC--CCcCcccCCCeEEEeccccccccC---CCceEEEEEEc
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSP--VLSRPLELGADIVMHSATKFIAGH---SDVMAGVLAVK 169 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g--~~~~~~~~~~Di~~~S~sK~l~g~---~~~~gG~v~~~ 169 (339)
++++++.|+||--|..|.|---. -..+|-..|+|+.---++|+|+-| |+..+|-|.++
T Consensus 700 ~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK 762 (1001)
T KOG2040|consen 700 DDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK 762 (1001)
T ss_pred HHHHHHHHhcCCEEEecCCCccceecccCCccccccceeecccceeeecCCCCCCCCCccchh
Confidence 88999999999999999885211 124566678999888999999733 22334455443
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=93.54 E-value=0.81 Score=46.00 Aligned_cols=93 Identities=24% Similarity=0.381 Sum_probs=61.9
Q ss_pred HHHHHhHhCCC--eEEEcCcHHHHHHH-HHH-hcCCCCEEEEcCCCccchHHHHH-------------------------
Q 019543 61 ESLLAKLDKAD--RALCFTSGMAALAA-VTH-LLGTGEEIVAGDDLYGGTDRLLS------------------------- 111 (339)
Q Consensus 61 e~~la~~~g~~--~~l~~~sG~~A~~~-il~-ll~~GD~Vi~~~~~y~~~~~~~~------------------------- 111 (339)
+..++++.|-. ++-+.--|++|-.+ .+. -..++-..+++...++.+..+++
T Consensus 169 QTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~~~~~~s~~~v 248 (1001)
T KOG2040|consen 169 QTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDIKEADYSSKDV 248 (1001)
T ss_pred HHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecCHHHhhccccce
Confidence 34556666643 56667778877653 332 23445557888888888776655
Q ss_pred -----------------HHHHHHHHHcCCEEEEeCCc-CCCCCcCcccCCCeEEEecccc
Q 019543 112 -----------------RKIAEMAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATK 153 (339)
Q Consensus 112 -----------------~~I~~la~~~g~~livD~a~-a~g~~~~~~~~~~Di~~~S~sK 153 (339)
.+++++|++.|..+++-.-- +.-....|-++|+||+++|...
T Consensus 249 ~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQR 308 (1001)
T KOG2040|consen 249 SGVLVQYPDTEGSVLDFDELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQR 308 (1001)
T ss_pred eEEEEEcCCCCCcccCHHHHHHHhhccCceEEEeehhhHHHccCChhhcCceeeeccccc
Confidence 89999999999887654322 2223345567899999999654
No 393
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=83.82 E-value=2.5 Score=38.87 Aligned_cols=57 Identities=14% Similarity=0.181 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEeccccccccCCCceEEEEEE
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDVMAGVLAV 168 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~ 168 (339)
.+|...-+..|++|-.|=||+.|-. ..-..+|+|+.|-...||++...+.+||..+-
T Consensus 234 ~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvH 291 (465)
T KOG3846|consen 234 GAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVH 291 (465)
T ss_pred hhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCccceeeee
Confidence 5665444556888888888887732 22235799999999999998655566777653
No 394
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=73.41 E-value=8.3 Score=34.66 Aligned_cols=59 Identities=19% Similarity=0.228 Sum_probs=36.2
Q ss_pred EEEcCcHHHHHHHHHHhcCCCCEEEEcCC-CccchHH-------------H-HHHHHHHHHHHcCCEEEEeCCcC
Q 019543 73 ALCFTSGMAALAAVTHLLGTGEEIVAGDD-LYGGTDR-------------L-LSRKIAEMAHAHGALLLVDNSIM 132 (339)
Q Consensus 73 ~l~~~sG~~A~~~il~ll~~GD~Vi~~~~-~y~~~~~-------------~-~~~~I~~la~~~g~~livD~a~a 132 (339)
.+++.+-+.+-.++-.|...|. |+++-- .|++-.. + =.+++.++++++++.+|+|.+|-
T Consensus 3 ILvlgGTtE~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHP 76 (249)
T PF02571_consen 3 ILVLGGTTEGRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHP 76 (249)
T ss_pred EEEEechHHHHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCc
Confidence 4555555566665555666666 443321 2222111 0 01889999999999999999994
No 395
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=65.80 E-value=45 Score=28.90 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=22.1
Q ss_pred CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCC
Q 019543 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDD 101 (339)
Q Consensus 71 ~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~ 101 (339)
..++++.+|..|...+..|++.|-.|.+-++
T Consensus 10 k~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp 40 (205)
T TIGR01470 10 RAVLVVGGGDVALRKARLLLKAGAQLRVIAE 40 (205)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCEEEEEcC
Confidence 4788999998887766667777765555444
No 396
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=63.00 E-value=69 Score=28.29 Aligned_cols=60 Identities=17% Similarity=0.114 Sum_probs=39.2
Q ss_pred CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccc-hHHHH--------------------------------HHHHHHH
Q 019543 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGG-TDRLL--------------------------------SRKIAEM 117 (339)
Q Consensus 71 ~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~-~~~~~--------------------------------~~~I~~l 117 (339)
..++++.+|.-|..-+..|++.|-.|.+-.+.... ...+. .++|.+.
T Consensus 26 ~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATdD~~vN~~I~~~ 105 (223)
T PRK05562 26 IKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATDDEKLNNKIRKH 105 (223)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCCCHHHHHHHHHH
Confidence 47999999988877666677777666555553321 11111 1899999
Q ss_pred HHHcCCEEE-EeCC
Q 019543 118 AHAHGALLL-VDNS 130 (339)
Q Consensus 118 a~~~g~~li-vD~a 130 (339)
|+++++++. +|+.
T Consensus 106 a~~~~~lvn~vd~p 119 (223)
T PRK05562 106 CDRLYKLYIDCSDY 119 (223)
T ss_pred HHHcCCeEEEcCCc
Confidence 999886554 5654
No 397
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=59.84 E-value=45 Score=25.49 Aligned_cols=65 Identities=22% Similarity=0.294 Sum_probs=40.7
Q ss_pred HHHHHHhHhCCCeEEEcCcHHHHH-HHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEe
Q 019543 60 LESLLAKLDKADRALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVD 128 (339)
Q Consensus 60 le~~la~~~g~~~~l~~~sG~~A~-~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD 128 (339)
+++.+++- ..+-+++++.. ..- ..+..+++.|-+|++..|.-...... ++|.++|+++|..+++.
T Consensus 54 ~~~ll~~~-~~D~V~I~tp~-~~h~~~~~~~l~~g~~v~~EKP~~~~~~~~--~~l~~~a~~~~~~~~Vg 119 (120)
T PF01408_consen 54 LEELLADE-DVDAVIIATPP-SSHAEIAKKALEAGKHVLVEKPLALTLEEA--EELVEAAKEKGVKVMVG 119 (120)
T ss_dssp HHHHHHHT-TESEEEEESSG-GGHHHHHHHHHHTTSEEEEESSSSSSHHHH--HHHHHHHHHHTSCEEEE
T ss_pred HHHHHHhh-cCCEEEEecCC-cchHHHHHHHHHcCCEEEEEcCCcCCHHHH--HHHHHHHHHhCCEEEEe
Confidence 55555533 33434443333 222 23455677888999999875543222 78999999999998874
No 398
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=59.42 E-value=3.4 Score=37.18 Aligned_cols=54 Identities=20% Similarity=0.162 Sum_probs=39.3
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCc------Cccc-CCCeEEEeccccccccCCCceEEEEEE
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLS------RPLE-LGADIVMHSATKFIAGHSDVMAGVLAV 168 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~------~~~~-~~~Di~~~S~sK~l~g~~~~~gG~v~~ 168 (339)
++|..+|..|+++-+|.++|+.-... ...+ ..+|.++.|+.|.|--| +||.++.
T Consensus 177 eaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vp---vggaiia 237 (432)
T KOG3843|consen 177 EAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVP---VGGAIIA 237 (432)
T ss_pred HHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceee---cchhHhh
Confidence 99999999999999999999753210 0111 13588899999999854 4666653
No 399
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=58.75 E-value=89 Score=27.27 Aligned_cols=57 Identities=23% Similarity=0.330 Sum_probs=39.6
Q ss_pred CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCcc-chHHHHH--------------------------------HHHHHH
Q 019543 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYG-GTDRLLS--------------------------------RKIAEM 117 (339)
Q Consensus 71 ~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~-~~~~~~~--------------------------------~~I~~l 117 (339)
..++++.+|..|.--+-.+++.|.+|.+-.+... ....+.. ++|.+.
T Consensus 13 k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~ln~~i~~~ 92 (210)
T COG1648 13 KKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEELNERIAKA 92 (210)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHHHHHHHHHH
Confidence 4689999998888766667788888777666541 1111111 889999
Q ss_pred HHHcCCEEEE
Q 019543 118 AHAHGALLLV 127 (339)
Q Consensus 118 a~~~g~~liv 127 (339)
|+++++++-+
T Consensus 93 a~~~~i~vNv 102 (210)
T COG1648 93 ARERRILVNV 102 (210)
T ss_pred HHHhCCceec
Confidence 9999887643
No 400
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=55.76 E-value=32 Score=30.92 Aligned_cols=60 Identities=22% Similarity=0.205 Sum_probs=36.2
Q ss_pred EEEcCcHHHHHHHHHHhcCCCCEEEEcCC-CccchH--------HHH-H-HHHHHHHHHcCCEEEEeCCcC
Q 019543 73 ALCFTSGMAALAAVTHLLGTGEEIVAGDD-LYGGTD--------RLL-S-RKIAEMAHAHGALLLVDNSIM 132 (339)
Q Consensus 73 ~l~~~sG~~A~~~il~ll~~GD~Vi~~~~-~y~~~~--------~~~-~-~~I~~la~~~g~~livD~a~a 132 (339)
.+++.+-+.+-.++-.|.+.|-.|+++-- .|+... .-+ . +.+.++++++++.+|+|.+|-
T Consensus 5 IlvlgGT~egr~la~~L~~~g~~v~~Svat~~g~~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHP 75 (248)
T PRK08057 5 ILLLGGTSEARALARALAAAGVDIVLSLAGRTGGPADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHP 75 (248)
T ss_pred EEEEechHHHHHHHHHHHhCCCeEEEEEccCCCCcccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCc
Confidence 44554445665544445555665555432 232200 001 1 889999999999999999994
No 401
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=53.85 E-value=12 Score=27.49 Aligned_cols=20 Identities=30% Similarity=0.572 Sum_probs=18.1
Q ss_pred HHHHHHHHHcCCEEEEeCCc
Q 019543 112 RKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~ 131 (339)
++|.++|+++|++++.|..-
T Consensus 30 ~~I~~~A~e~~VPi~~~~~L 49 (82)
T TIGR00789 30 ERIIEIAKKHGIPIVEDPDL 49 (82)
T ss_pred HHHHHHHHHcCCCEEeCHHH
Confidence 88999999999999999653
No 402
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=52.71 E-value=60 Score=29.61 Aligned_cols=35 Identities=31% Similarity=0.354 Sum_probs=21.1
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEec
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHS 150 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S 150 (339)
-+.++.|+++|+++|.= +.....|+..-+|++...
T Consensus 194 i~~a~~ak~~ga~vIai----T~~~~spla~~Ad~~L~~ 228 (281)
T COG1737 194 VEAAELAKERGAKVIAI----TDSADSPLAKLADIVLLV 228 (281)
T ss_pred HHHHHHHHHCCCcEEEE----cCCCCCchhhhhceEEec
Confidence 56678889999888732 112234555456765543
No 403
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=52.37 E-value=8 Score=36.56 Aligned_cols=71 Identities=13% Similarity=0.136 Sum_probs=40.8
Q ss_pred hHHHHHHHHHhHhCCCeEEEcCcH-HHHHHH----HHHhcCCCCEEEEcCCCccchHH------------------HHHH
Q 019543 56 TRDALESLLAKLDKADRALCFTSG-MAALAA----VTHLLGTGEEIVAGDDLYGGTDR------------------LLSR 112 (339)
Q Consensus 56 ~~~~le~~la~~~g~~~~l~~~sG-~~A~~~----il~ll~~GD~Vi~~~~~y~~~~~------------------~~~~ 112 (339)
+.++..+++.+-+|-+..= +-= +.+... .+.-+ |+-.|++++|++.+..- .+.-
T Consensus 223 tKqEVKdE~K~sEGdPeVK--sr~Rq~~re~a~~rm~~~V-p~AdvVItNPTH~AVAlkY~~~~~~AP~VvAKG~d~~Al 299 (363)
T COG1377 223 TKQEVKDEYKQSEGDPEVK--SRIRQMQREIARRRMMSDV-PKADVVITNPTHYAVALKYDPEKMPAPVVVAKGVDLVAL 299 (363)
T ss_pred cHHHHHHHHhhccCChhhh--HHHHHHHHHHHHHHHHhhC-CCCCEEeeCcCceeeeeeeccccCCCCEEEEeCCcHHHH
Confidence 5678888888887743210 000 111111 22223 44445567776554321 1117
Q ss_pred HHHHHHHHcCCEEEEeC
Q 019543 113 KIAEMAHAHGALLLVDN 129 (339)
Q Consensus 113 ~I~~la~~~g~~livD~ 129 (339)
+|.++|++||+++++|-
T Consensus 300 kIreiA~e~~Ipi~enp 316 (363)
T COG1377 300 KIREIAKEHGIPIIENP 316 (363)
T ss_pred HHHHHHHHcCCceecCh
Confidence 89999999999999984
No 404
>PRK04148 hypothetical protein; Provisional
Probab=49.73 E-value=68 Score=25.90 Aligned_cols=64 Identities=19% Similarity=0.243 Sum_probs=36.1
Q ss_pred HHHHHHHHhHhCC---CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 58 DALESLLAKLDKA---DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 58 ~~le~~la~~~g~---~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
+.+.+.|++.++. ..++....|+. ......|.+.|-+|+..|.. +..++.+++.++.+++|+..
T Consensus 2 ~~i~~~l~~~~~~~~~~kileIG~GfG-~~vA~~L~~~G~~ViaIDi~---------~~aV~~a~~~~~~~v~dDlf 68 (134)
T PRK04148 2 DTIAEFIAENYEKGKNKKIVELGIGFY-FKVAKKLKESGFDVIVIDIN---------EKAVEKAKKLGLNAFVDDLF 68 (134)
T ss_pred hHHHHHHHHhcccccCCEEEEEEecCC-HHHHHHHHHCCCEEEEEECC---------HHHHHHHHHhCCeEEECcCC
Confidence 3455666665543 34777777732 21122233567777776644 22345566667777777764
No 405
>KOG2550 consensus IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]
Probab=47.76 E-value=23 Score=34.09 Aligned_cols=34 Identities=32% Similarity=0.436 Sum_probs=25.1
Q ss_pred HHHHHHHHHcCCEEEEeCCc-CCCCCcCcccCCCe
Q 019543 112 RKIAEMAHAHGALLLVDNSI-MSPVLSRPLELGAD 145 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~-a~g~~~~~~~~~~D 145 (339)
-+.++.|+++|+++|.|.-. ..|+..+.+.+|++
T Consensus 344 y~va~~A~q~gvpviADGGiq~~Ghi~KAl~lGAs 378 (503)
T KOG2550|consen 344 YKVAEFANQFGVPCIADGGIQNVGHVVKALGLGAS 378 (503)
T ss_pred hhHHHHHHhcCCceeecCCcCccchhHhhhhcCch
Confidence 67889999999999999743 44555555666665
No 406
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=46.82 E-value=65 Score=29.05 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=18.8
Q ss_pred HHHHHHHHHcCCEEEEeCCcCC
Q 019543 112 RKIAEMAHAHGALLLVDNSIMS 133 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~ 133 (339)
..|.+.|+++|.-+|+|.+-++
T Consensus 103 ~~l~~~a~~~Gyd~V~dGtNas 124 (269)
T COG1606 103 STLVEEAEKRGYDVVADGTNAS 124 (269)
T ss_pred HHHHHHHHHcCCCEEEeCCcHH
Confidence 7788999999999999988754
No 407
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=46.82 E-value=1e+02 Score=27.71 Aligned_cols=15 Identities=33% Similarity=0.248 Sum_probs=11.1
Q ss_pred HHHHHHHHHcCCEEE
Q 019543 112 RKIAEMAHAHGALLL 126 (339)
Q Consensus 112 ~~I~~la~~~g~~li 126 (339)
.++++.|+++|+.+|
T Consensus 192 ~~~~~~ak~~ga~iI 206 (278)
T PRK11557 192 NLAADEALRVGAKVL 206 (278)
T ss_pred HHHHHHHHHcCCCEE
Confidence 456788888887665
No 408
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=46.71 E-value=88 Score=24.20 Aligned_cols=16 Identities=31% Similarity=0.461 Sum_probs=10.9
Q ss_pred HHHHHHHHHcCCEEEE
Q 019543 112 RKIAEMAHAHGALLLV 127 (339)
Q Consensus 112 ~~I~~la~~~g~~liv 127 (339)
-++++.|+++|+.+++
T Consensus 77 ~~~~~~a~~~g~~iv~ 92 (139)
T cd05013 77 VEAAEIAKERGAKVIA 92 (139)
T ss_pred HHHHHHHHHcCCeEEE
Confidence 4556778888876653
No 409
>PRK09108 type III secretion system protein HrcU; Validated
Probab=45.85 E-value=11 Score=35.68 Aligned_cols=18 Identities=22% Similarity=0.255 Sum_probs=16.9
Q ss_pred HHHHHHHHHcCCEEEEeC
Q 019543 112 RKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~ 129 (339)
.+|.++|++||+++++|-
T Consensus 294 ~~Ir~~A~e~~VPvven~ 311 (353)
T PRK09108 294 LALRRHAHALGIPIVGNP 311 (353)
T ss_pred HHHHHHHHHcCCCEEeCH
Confidence 899999999999999994
No 410
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=45.17 E-value=54 Score=29.59 Aligned_cols=21 Identities=24% Similarity=0.351 Sum_probs=19.1
Q ss_pred HHHHHHHHHcCCEEEEeCCcC
Q 019543 112 RKIAEMAHAHGALLLVDNSIM 132 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a 132 (339)
+.+.++.+++++.+|+|.+|.
T Consensus 55 ~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 55 QELREFLKRHSIDILVDATHP 75 (256)
T ss_pred HHHHHHHHhcCCCEEEEcCCH
Confidence 668899999999999999994
No 411
>PRK13109 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=44.90 E-value=12 Score=35.61 Aligned_cols=18 Identities=33% Similarity=0.486 Sum_probs=17.0
Q ss_pred HHHHHHHHHcCCEEEEeC
Q 019543 112 RKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~ 129 (339)
.+|.++|++||+++++|-
T Consensus 301 ~~Ir~~A~e~~VPiven~ 318 (358)
T PRK13109 301 LKIREIAEENGIPVIEDK 318 (358)
T ss_pred HHHHHHHHHcCCCEEeCH
Confidence 899999999999999994
No 412
>PRK12721 secretion system apparatus protein SsaU; Reviewed
Probab=44.72 E-value=12 Score=35.47 Aligned_cols=18 Identities=17% Similarity=0.270 Sum_probs=16.9
Q ss_pred HHHHHHHHHcCCEEEEeC
Q 019543 112 RKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~ 129 (339)
.+|.++|++||+++++|-
T Consensus 292 ~~Ir~iA~e~~VPiven~ 309 (349)
T PRK12721 292 LHIVKLAERNGIPVVENI 309 (349)
T ss_pred HHHHHHHHHcCCCEEeCH
Confidence 899999999999999984
No 413
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=44.51 E-value=66 Score=28.16 Aligned_cols=47 Identities=17% Similarity=0.236 Sum_probs=32.5
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHH--HHHHHHHHHcCCEEEEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLS--RKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~--~~I~~la~~~g~~livD~a~ 131 (339)
.+-..++.|..++.-..-......... +++.++|++||+.+++++=.
T Consensus 26 ~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd~~ 74 (211)
T COG0352 26 WVEAALKGGVTAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIINDRV 74 (211)
T ss_pred HHHHHHhCCCeEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecCcH
Confidence 344567888777765554433333222 89999999999999998743
No 414
>PRK06298 type III secretion system protein; Validated
Probab=44.35 E-value=12 Score=35.45 Aligned_cols=18 Identities=17% Similarity=0.276 Sum_probs=17.0
Q ss_pred HHHHHHHHHcCCEEEEeC
Q 019543 112 RKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~ 129 (339)
.+|.++|++||+++++|-
T Consensus 293 ~~Ir~iA~e~~VPiven~ 310 (356)
T PRK06298 293 KRIIAEAEKYGVPIMRNV 310 (356)
T ss_pred HHHHHHHHHcCCCEEeCH
Confidence 899999999999999994
No 415
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=44.33 E-value=71 Score=28.73 Aligned_cols=58 Identities=21% Similarity=0.217 Sum_probs=35.2
Q ss_pred EEcCcH-HHHHHHHHHhc-CCCCEEEEcCCCccchHHHH----------H-HHHHHHHHHcCCEEEEeCCc
Q 019543 74 LCFTSG-MAALAAVTHLL-GTGEEIVAGDDLYGGTDRLL----------S-RKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 74 l~~~sG-~~A~~~il~ll-~~GD~Vi~~~~~y~~~~~~~----------~-~~I~~la~~~g~~livD~a~ 131 (339)
++.-+| ..|....-.|. .+++.++++--.|++...-- . +++.++-+++++-+++|.+|
T Consensus 5 ilvlGGT~Dar~la~~L~~~~~~~~~ss~t~~g~~l~~~~~~~~~~G~l~~e~l~~~l~e~~i~llIDATH 75 (257)
T COG2099 5 ILLLGGTSDARALAKKLAAAPVDIILSSLTGYGAKLAEQIGPVRVGGFLGAEGLAAFLREEGIDLLIDATH 75 (257)
T ss_pred EEEEeccHHHHHHHHHhhccCccEEEEEcccccccchhccCCeeecCcCCHHHHHHHHHHcCCCEEEECCC
Confidence 333444 34544433332 23566665554454432110 0 88999999999999999999
No 416
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=42.36 E-value=1.2e+02 Score=22.80 Aligned_cols=58 Identities=26% Similarity=0.251 Sum_probs=38.4
Q ss_pred CCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCc--------------cch------------HHHHHHHHHHHHHHcCC
Q 019543 70 ADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLY--------------GGT------------DRLLSRKIAEMAHAHGA 123 (339)
Q Consensus 70 ~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y--------------~~~------------~~~~~~~I~~la~~~g~ 123 (339)
...++++.+|-.|..-+..|++.|-+|.+-.+.. ... ...+.++|.+.|+++++
T Consensus 7 ~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~~~~~~~i~~~~~~~~~~l~~~~lV~~at~d~~~n~~i~~~a~~~~i 86 (103)
T PF13241_consen 7 GKRVLVVGGGPVAARKARLLLEAGAKVTVISPEIEFSEGLIQLIRREFEEDLDGADLVFAATDDPELNEAIYADARARGI 86 (103)
T ss_dssp T-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSEHHHHTSCEEEESS-GGGCTTESEEEE-SS-HHHHHHHHHHHHHTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhhhhHHHHHhhhHHHHHhhheEEEecCCCHHHHHHHHHHHhhCCE
Confidence 3578899999888877777888877655544432 000 01112889999999999
Q ss_pred EEEE
Q 019543 124 LLLV 127 (339)
Q Consensus 124 ~liv 127 (339)
++-+
T Consensus 87 ~vn~ 90 (103)
T PF13241_consen 87 LVNV 90 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 417
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=42.07 E-value=53 Score=25.80 Aligned_cols=16 Identities=31% Similarity=0.420 Sum_probs=14.6
Q ss_pred HHHHHHHHHcCCEEEE
Q 019543 112 RKIAEMAHAHGALLLV 127 (339)
Q Consensus 112 ~~I~~la~~~g~~liv 127 (339)
+++.++|++++++|+.
T Consensus 89 ~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 89 EEIIELADELGLPLIE 104 (123)
T ss_pred HHHHHHHHHcCCCEEE
Confidence 8899999999999885
No 418
>PRK12468 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=41.96 E-value=14 Score=35.46 Aligned_cols=17 Identities=29% Similarity=0.348 Sum_probs=16.5
Q ss_pred HHHHHHHHHcCCEEEEe
Q 019543 112 RKIAEMAHAHGALLLVD 128 (339)
Q Consensus 112 ~~I~~la~~~g~~livD 128 (339)
.+|.++|++||+++++|
T Consensus 299 ~~Ir~~A~e~~VPiven 315 (386)
T PRK12468 299 LRIRELGAEHRIPLLEA 315 (386)
T ss_pred HHHHHHHHHcCCcEEeC
Confidence 89999999999999998
No 419
>TIGR00328 flhB flagellar biosynthetic protein FlhB. FlhB and its functionally equivalent orthologs, from among a larger superfamily of proteins involved in type III protein export systems, are specifically involved in flagellar protein export. The seed members are restricted and the trusted cutoff is set high such that the proteins gathered by this model play roles specifically related to flagellar structures. Full-length homologs scoring below the trusted cutoff are involved in peptide export but not necessarily in the creation of flagella.
Probab=41.90 E-value=14 Score=34.98 Aligned_cols=19 Identities=21% Similarity=0.309 Sum_probs=17.5
Q ss_pred HHHHHHHHHcCCEEEEeCC
Q 019543 112 RKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a 130 (339)
.+|.++|++||++++.|-.
T Consensus 292 ~~I~~~A~~~~vPi~~~~~ 310 (347)
T TIGR00328 292 LKIKEIARENNVPIVENPP 310 (347)
T ss_pred HHHHHHHHHcCCCEEeCHH
Confidence 8999999999999999954
No 420
>COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]
Probab=41.29 E-value=18 Score=26.93 Aligned_cols=19 Identities=37% Similarity=0.412 Sum_probs=17.6
Q ss_pred HHHHHHHHHcCCEEEEeCC
Q 019543 112 RKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a 130 (339)
++|.+.|++||+++..|..
T Consensus 35 e~II~~Ake~~Vpi~edp~ 53 (92)
T COG2257 35 EKIIEKAKEHGVPIQEDPL 53 (92)
T ss_pred HHHHHHHHHcCCCcccCHH
Confidence 8999999999999999964
No 421
>TIGR01404 FlhB_rel_III type III secretion protein, YscU/HrpY family. This model represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FlhB (TIGRFAMs model TIGR00328). This model may not identify all type III secretion system FlhB homologs.
Probab=40.61 E-value=14 Score=34.81 Aligned_cols=18 Identities=17% Similarity=0.163 Sum_probs=17.0
Q ss_pred HHHHHHHHHcCCEEEEeC
Q 019543 112 RKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~ 129 (339)
.+|.++|++||+++++|-
T Consensus 291 ~~Ir~iA~e~~VPiven~ 308 (342)
T TIGR01404 291 LAVRAYAEEAGIPVVRDI 308 (342)
T ss_pred HHHHHHHHHcCCCEeeCH
Confidence 899999999999999995
No 422
>PF03192 DUF257: Pyrococcus protein of unknown function, DUF257; InterPro: IPR005489 This family of proteins is of unknown function.; PDB: 2EKD_C.
Probab=40.60 E-value=26 Score=30.63 Aligned_cols=47 Identities=15% Similarity=0.227 Sum_probs=28.2
Q ss_pred HhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCcCCCC
Q 019543 88 HLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSIMSPV 135 (339)
Q Consensus 88 ~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~a~g~ 135 (339)
.-+++|+.|++.-..+....-++ -.|...|++.|.++++||...++.
T Consensus 6 ~~~k~GE~VLVEy~S~~~~el~~-~~li~~~~~~~~~vlI~DilDtl~ 52 (210)
T PF03192_consen 6 DSIKPGETVLVEYSSSSPPELLF-YELIKWAREKGYPVLIDDILDTLH 52 (210)
T ss_dssp TTS-TT-EEEEEE-TTS-THHHH-HHHHH---T-SS-BEEEEETTHHH
T ss_pred ccCCCCCEEEEEeCCCCcHHHHH-HHHHHHhhhcCCCEEEEEcCCCHH
Confidence 45789999999866544433333 788899999999999999876654
No 423
>PRK08156 type III secretion system protein SpaS; Validated
Probab=38.76 E-value=15 Score=34.93 Aligned_cols=18 Identities=17% Similarity=0.150 Sum_probs=16.8
Q ss_pred HHHHHHHHHcCCEEEEeC
Q 019543 112 RKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~ 129 (339)
.+|.++|++||+++++|-
T Consensus 287 ~~IreiA~e~~VPiven~ 304 (361)
T PRK08156 287 LAVRAYAEKVGVPVVRDI 304 (361)
T ss_pred HHHHHHHHHCCCCEeeCH
Confidence 899999999999999983
No 424
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=38.70 E-value=1.4e+02 Score=21.01 Aligned_cols=69 Identities=17% Similarity=0.208 Sum_probs=39.4
Q ss_pred chHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEE
Q 019543 55 PTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLV 127 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~liv 127 (339)
+..+.++..+.++.+.+-......++... .......++|.+++-+.. +.+... .++++.++++|+.++.
T Consensus 11 ~~a~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~iS~s-g~t~~~--~~~~~~a~~~g~~ii~ 79 (87)
T cd04795 11 AIAAYFALELLELTGIEVVALIATELEHA-SLLSLLRKGDVVIALSYS-GRTEEL--LAALEIAKELGIPVIA 79 (87)
T ss_pred HHHHHHHHHHhcccCCceEEeCCcHHHHH-HHHhcCCCCCEEEEEECC-CCCHHH--HHHHHHHHHcCCeEEE
Confidence 45667777777765655444444433222 124457889987764432 111122 4567888999988763
No 425
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=37.34 E-value=2.6e+02 Score=24.02 Aligned_cols=32 Identities=25% Similarity=0.197 Sum_probs=20.0
Q ss_pred CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCC
Q 019543 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDL 102 (339)
Q Consensus 71 ~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~ 102 (339)
..++++.+|..|...+-.|++.|-.|.+-++.
T Consensus 11 k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~ 42 (202)
T PRK06718 11 KRVVIVGGGKVAGRRAITLLKYGAHIVVISPE 42 (202)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Confidence 46888888877766555566666555444443
No 426
>TIGR03855 NAD_NadX aspartate dehydrogenase. Members of this protein family are L-aspartate dehydrogenase, as shown for the NADP-dependent enzyme TM_1643 of Thermotoga maritima. Members lack homology to NadB, the aspartate oxidase (EC 1.4.3.16) of most mesophilic bacteria (described by TIGR00551), which this enzyme replaces in the generation of oxaloacetate from aspartate for the NAD biosynthetic pathway. All members of the seed alignment are found adjacent to other genes of NAD biosynthesis, although other uses of L-aspartate dehydrogenase may occur.
Probab=36.52 E-value=1.7e+02 Score=25.85 Aligned_cols=57 Identities=12% Similarity=0.152 Sum_probs=39.8
Q ss_pred CeEEEcCcHHHHHH-HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEe
Q 019543 71 DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVD 128 (339)
Q Consensus 71 ~~~l~~~sG~~A~~-~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD 128 (339)
-++++-.+.+.+.. .....++.|-+|++..+......... ++|.++|+++|..+++=
T Consensus 38 vDaVviatp~~~H~e~a~~aL~aGkhVl~~s~gAlad~e~~-~~l~~aA~~~g~~l~i~ 95 (229)
T TIGR03855 38 VDIVVEAASQEAVKEYAEKILKNGKDLLIMSVGALADRELR-ERLREVARSSGRKVYIP 95 (229)
T ss_pred CCEEEECCChHHHHHHHHHHHHCCCCEEEECCcccCCHHHH-HHHHHHHHhcCCEEEEC
Confidence 35666666666654 45667888988888665433322222 88999999999999984
No 427
>PRK05702 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=36.48 E-value=19 Score=34.24 Aligned_cols=19 Identities=26% Similarity=0.389 Sum_probs=17.3
Q ss_pred HHHHHHHHHcCCEEEEeCC
Q 019543 112 RKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a 130 (339)
.+|.++|++||++++.|-.
T Consensus 299 ~~i~~~A~~~~vpi~~~~~ 317 (359)
T PRK05702 299 LKIREIAREHNVPIVENPP 317 (359)
T ss_pred HHHHHHHHHcCCCEEeCHH
Confidence 8899999999999999943
No 428
>PLN02522 ATP citrate (pro-S)-lyase
Probab=36.37 E-value=2e+02 Score=29.59 Aligned_cols=87 Identities=13% Similarity=0.072 Sum_probs=58.0
Q ss_pred CCCCCcccCC--CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcCCCC-EEEEcCCCccchHHHHHHHHHHHH
Q 019543 43 ENGPYDYTRS--GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLGTGE-EIVAGDDLYGGTDRLLSRKIAEMA 118 (339)
Q Consensus 43 ~~~~~~y~r~--~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~~GD-~Vi~~~~~y~~~~~~~~~~I~~la 118 (339)
....+-|+.. +-|..+..++..++.-+++..++|.....|...++. +-.+|= .|++-..-++.. -..+|.++|
T Consensus 50 ~~~~~~~g~~~~~iPVf~tv~eA~~~~~~~~~~vifvp~~~a~da~lEa~~a~GIk~~VIiteGfpe~---d~~~l~~~A 126 (608)
T PLN02522 50 GFQKLFFGQEEIAIPVHGSIEAACKAHPTADVFINFASFRSAAASSMEALKQPTIRVVAIIAEGVPES---DTKQLIAYA 126 (608)
T ss_pred cceeEecCCEeeCccccchHHHHHHhCCCCcEEEEeCChHHhHHHHHHHHhhCCCCEEEEECCCCChh---hHHHHHHHH
Confidence 3344555543 458899999999886678889999998877776554 333342 233333333321 138899999
Q ss_pred HHcCCEEEEeCCcC
Q 019543 119 HAHGALLLVDNSIM 132 (339)
Q Consensus 119 ~~~g~~livD~a~a 132 (339)
+++|+.||==++.+
T Consensus 127 r~~g~rlIGPNc~G 140 (608)
T PLN02522 127 RANNKVVIGPATVG 140 (608)
T ss_pred HHcCCEEECCCCCe
Confidence 99999998555543
No 429
>PF02639 DUF188: Uncharacterized BCR, YaiI/YqxD family COG1671; InterPro: IPR003791 This entry describes proteins of unknown function.
Probab=36.20 E-value=97 Score=24.82 Aligned_cols=46 Identities=22% Similarity=0.329 Sum_probs=35.0
Q ss_pred eEEEcCcHHHHHH-HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEe
Q 019543 72 RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVD 128 (339)
Q Consensus 72 ~~l~~~sG~~A~~-~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD 128 (339)
..+.+.+|..+.. .|+..+++||.||+.| --|+++|=+.|+.++-+
T Consensus 30 ~~i~Vd~g~DaaD~~I~~~~~~gDiVITqD-----------igLA~~~l~Kga~vl~~ 76 (130)
T PF02639_consen 30 EMIVVDSGFDAADFYIVNHAKPGDIVITQD-----------IGLASLLLAKGAYVLNP 76 (130)
T ss_pred EEEEECCCCChHHHHHHHcCCCCCEEEECC-----------HHHHHHHHHCCCEEECC
Confidence 5778899976654 6888999999999887 23567777778777743
No 430
>PRK12772 bifunctional flagellar biosynthesis protein FliR/FlhB; Provisional
Probab=35.63 E-value=20 Score=36.68 Aligned_cols=19 Identities=21% Similarity=0.350 Sum_probs=17.4
Q ss_pred HHHHHHHHHcCCEEEEeCC
Q 019543 112 RKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a 130 (339)
.+|.++|++||+++++|-.
T Consensus 555 ~~Ir~~A~e~~VPive~~~ 573 (609)
T PRK12772 555 LKIKEIAKENDVPIIENKP 573 (609)
T ss_pred HHHHHHHHHCCCcEEeCHH
Confidence 8999999999999999953
No 431
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=34.92 E-value=2.6e+02 Score=23.24 Aligned_cols=27 Identities=22% Similarity=0.508 Sum_probs=19.3
Q ss_pred HHHHHHHHhHhCCCeEEEcCcHHHHHH
Q 019543 58 DALESLLAKLDKADRALCFTSGMAALA 84 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~sG~~A~~ 84 (339)
+.+++....+..++.+.++..|.++..
T Consensus 21 ~~l~~~~~~i~~a~~I~i~G~G~S~~~ 47 (179)
T cd05005 21 EELDKLISAILNAKRIFVYGAGRSGLV 47 (179)
T ss_pred HHHHHHHHHHHhCCeEEEEecChhHHH
Confidence 456666666677788889988866543
No 432
>PRK15482 transcriptional regulator MurR; Provisional
Probab=33.87 E-value=1.8e+02 Score=26.31 Aligned_cols=26 Identities=23% Similarity=0.201 Sum_probs=16.0
Q ss_pred HHHHHHHHhHhCCCeEEEcCcHHHHH
Q 019543 58 DALESLLAKLDKADRALCFTSGMAAL 83 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~sG~~A~ 83 (339)
+++++....+..++.+.++..|.+..
T Consensus 123 ~~l~~~~~~i~~A~~I~i~G~G~S~~ 148 (285)
T PRK15482 123 ARLQKIIEVISKAPFIQITGLGGSAL 148 (285)
T ss_pred HHHHHHHHHHHhCCeeEEEEeChhHH
Confidence 34555555556677777777775544
No 433
>PRK10637 cysG siroheme synthase; Provisional
Probab=33.58 E-value=2.4e+02 Score=27.75 Aligned_cols=61 Identities=18% Similarity=0.162 Sum_probs=39.6
Q ss_pred CCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchH-HHH--------------------------------HHHHHH
Q 019543 70 ADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTD-RLL--------------------------------SRKIAE 116 (339)
Q Consensus 70 ~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~-~~~--------------------------------~~~I~~ 116 (339)
...++++.+|..|..-+..|++.|-.|.+-.+.+..-. .+. .++|.+
T Consensus 12 ~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~~n~~i~~ 91 (457)
T PRK10637 12 DRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDAVNQRVSE 91 (457)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHHHhHHHHH
Confidence 35789999998887666666777766655444332211 111 188999
Q ss_pred HHHHcCCEEE-EeCC
Q 019543 117 MAHAHGALLL-VDNS 130 (339)
Q Consensus 117 la~~~g~~li-vD~a 130 (339)
.|++.|+++- +|+.
T Consensus 92 ~a~~~~~lvN~~d~~ 106 (457)
T PRK10637 92 AAEARRIFCNVVDAP 106 (457)
T ss_pred HHHHcCcEEEECCCc
Confidence 9999998764 5544
No 434
>PRK13936 phosphoheptose isomerase; Provisional
Probab=33.52 E-value=3e+02 Score=23.44 Aligned_cols=15 Identities=13% Similarity=0.173 Sum_probs=8.9
Q ss_pred HHHHHHHHHcCCEEE
Q 019543 112 RKIAEMAHAHGALLL 126 (339)
Q Consensus 112 ~~I~~la~~~g~~li 126 (339)
-++++.|+++|+++|
T Consensus 128 ~~~~~~ak~~g~~iI 142 (197)
T PRK13936 128 IQAIQAAHEREMHVV 142 (197)
T ss_pred HHHHHHHHHCCCeEE
Confidence 345566666666655
No 435
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=33.48 E-value=2.7e+02 Score=25.58 Aligned_cols=75 Identities=17% Similarity=0.203 Sum_probs=52.1
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCE-EEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEE-IVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~-Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
+-|..+.+|+.+.+. +++.+++|..+..|..+++..+..|.. |++-....+ .... -++.+.+++.|..+|==++-
T Consensus 50 g~PVf~tV~EA~~~~-~a~~svI~Vp~~~aadai~EAida~i~liv~ITEgIP-~~D~--~~~~~~a~~~g~~iiGPncp 125 (293)
T COG0074 50 GLPVFNTVEEAVKET-GANASVIFVPPPFAADAILEAIDAGIKLVVIITEGIP-VLDM--LELKRYAREKGTRLIGPNCP 125 (293)
T ss_pred CccHHHHHHHHHHhh-CCCEEEEecCcHHHHHHHHHHHhCCCcEEEEEeCCCC-HHHH--HHHHHHHHhcCCEEECCCCC
Confidence 458999999999999 999999999887777777766666654 332222111 1112 35778899999888855543
No 436
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=32.88 E-value=2.3e+02 Score=25.71 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=20.0
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEe
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMH 149 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~ 149 (339)
.++++.|+++|+.+|.= +.....++...+|+++.
T Consensus 204 ~~~~~~ak~~g~~ii~I----T~~~~s~la~~ad~~l~ 237 (292)
T PRK11337 204 IEAVELAKKNGAKIICI----TNSYHSPIAKLADYVIC 237 (292)
T ss_pred HHHHHHHHHCCCeEEEE----eCCCCChhHHhCCEEEE
Confidence 56788899999877632 11112344445676664
No 437
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=32.82 E-value=1.7e+02 Score=26.97 Aligned_cols=54 Identities=17% Similarity=0.194 Sum_probs=38.4
Q ss_pred cCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCcC
Q 019543 76 FTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSIM 132 (339)
Q Consensus 76 ~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~a 132 (339)
+++.+..- .++..++.|-+|+|..|.-...... ++|+++|+++|..+.+.-...
T Consensus 75 tp~~~H~e-~~~~AL~aGkhVl~EKPla~t~~ea--~~l~~~a~~~~~~l~v~~~~R 128 (342)
T COG0673 75 TPNALHAE-LALAALEAGKHVLCEKPLALTLEEA--EELVELARKAGVKLMVGFNRR 128 (342)
T ss_pred CCChhhHH-HHHHHHhcCCEEEEcCCCCCCHHHH--HHHHHHHHHcCCceeeehhhh
Confidence 33444433 2355678899999999975543332 689999999999999986553
No 438
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=31.87 E-value=32 Score=26.08 Aligned_cols=16 Identities=19% Similarity=0.378 Sum_probs=13.6
Q ss_pred HHHHHHHHHcCCEEEE
Q 019543 112 RKIAEMAHAHGALLLV 127 (339)
Q Consensus 112 ~~I~~la~~~g~~liv 127 (339)
+++.++|++.|++++.
T Consensus 75 ~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 75 EEVLELAKELGIPVIS 90 (105)
T ss_dssp HHHHHHHHHHT-EEEE
T ss_pred HHHHHHHHHCCCEEEE
Confidence 8899999999999885
No 439
>COG0603 Predicted PP-loop superfamily ATPase [General function prediction only]
Probab=31.54 E-value=1.2e+02 Score=26.80 Aligned_cols=56 Identities=18% Similarity=0.164 Sum_probs=39.0
Q ss_pred CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEE
Q 019543 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLL 126 (339)
Q Consensus 71 ~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~li 126 (339)
+.++++++|+..-..+.-+.+.+++|..-...|+.-...-.+...++|++.|+...
T Consensus 4 kavvl~SGG~DStt~l~~a~~~~~ev~alsfdYGQrh~~Ele~A~~iak~lgv~~~ 59 (222)
T COG0603 4 KAVVLLSGGLDSTTCLAWAKKEGYEVHALTFDYGQRHRKELEAAKELAKKLGVPHH 59 (222)
T ss_pred eEEEEccCChhHHHHHHHHHhcCCEEEEEEeeCCCCcHHHHHHHHHHHHHcCCCeE
Confidence 35678888886655444456888999988888876432222666788999988654
No 440
>PRK12773 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=31.51 E-value=23 Score=35.88 Aligned_cols=18 Identities=22% Similarity=0.261 Sum_probs=17.0
Q ss_pred HHHHHHHHHcCCEEEEeC
Q 019543 112 RKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~ 129 (339)
.+|.++|++||+++++|-
T Consensus 591 lrIReiAeE~gVPIVENp 608 (646)
T PRK12773 591 LLIIRIARENGVPTVEDR 608 (646)
T ss_pred HHHHHHHHHcCCcEEECH
Confidence 899999999999999994
No 441
>PRK11579 putative oxidoreductase; Provisional
Probab=31.46 E-value=1.4e+02 Score=27.88 Aligned_cols=70 Identities=13% Similarity=0.181 Sum_probs=43.1
Q ss_pred HHHHHHHHhHhCCCeEEEcCcHHHHH-HHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 58 DALESLLAKLDKADRALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~sG~~A~-~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
..+++.|++ -.. ++++.++-...- ..+...++.|-+|+|..|.-...... ++|.++|+++|+.+.+---+
T Consensus 54 ~~~~ell~~-~~v-D~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~t~~ea--~~l~~~a~~~g~~l~v~~~~ 124 (346)
T PRK11579 54 SEPQHLFND-PNI-DLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQA--RELDALAKSAGRVLSVFHNR 124 (346)
T ss_pred CCHHHHhcC-CCC-CEEEEcCCcHHHHHHHHHHHHCCCeEEEeCCCCCCHHHH--HHHHHHHHHhCCEEEEEeec
Confidence 345555542 122 444433332222 23455678899999999875543222 78999999999999876543
No 442
>PRK15418 transcriptional regulator LsrR; Provisional
Probab=31.22 E-value=1.4e+02 Score=27.90 Aligned_cols=43 Identities=14% Similarity=0.054 Sum_probs=29.8
Q ss_pred hHHHHHHHHHhHhCCCeEEEcCcH--H---HHHH-----HHHHhcCCCCEEEE
Q 019543 56 TRDALESLLAKLDKADRALCFTSG--M---AALA-----AVTHLLGTGEEIVA 98 (339)
Q Consensus 56 ~~~~le~~la~~~g~~~~l~~~sG--~---~A~~-----~il~ll~~GD~Vi~ 98 (339)
...+||++|.+.||-++++++++. . ..+. .+..++++|+.|-+
T Consensus 69 ~~~~Le~~L~~~fgLk~~iVvp~~~~~~~~~~vg~~aA~~L~~~l~~~~~IGv 121 (318)
T PRK15418 69 GCLELENALRQHFSLQHIRVLPALADADIGGRLGIGAAHMLMSLLQPQQLLAV 121 (318)
T ss_pred cHHHHHHHHHHHhCCCEEEEEeCCCcccHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 456899999999999999988763 1 1121 12246888886654
No 443
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=31.21 E-value=3.4e+02 Score=23.30 Aligned_cols=16 Identities=25% Similarity=0.505 Sum_probs=10.1
Q ss_pred hCCCeEEEcCcHHHHH
Q 019543 68 DKADRALCFTSGMAAL 83 (339)
Q Consensus 68 ~g~~~~l~~~sG~~A~ 83 (339)
..+...+++..|-++.
T Consensus 39 ~~~~rI~~~G~GgSa~ 54 (196)
T PRK10886 39 LNGNKILCCGNGTSAA 54 (196)
T ss_pred HcCCEEEEEECcHHHH
Confidence 4556777787775443
No 444
>PRK06091 membrane protein FdrA; Validated
Probab=30.86 E-value=2.3e+02 Score=28.73 Aligned_cols=73 Identities=18% Similarity=0.108 Sum_probs=47.7
Q ss_pred chHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCC
Q 019543 55 PTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a 130 (339)
|..+.++..++++-+.+-++++..+..+...+...+..|-.+++-...++ ...+++|.++|+++|+.++==++
T Consensus 103 ~~~~t~~~a~~~lpe~DLAvIsVPa~~v~~al~ea~~~G~~viI~S~gfg---~~~E~~L~e~Ar~~GlrvmGPNC 175 (555)
T PRK06091 103 TQVRRWDSACQKLPDANLALISVAGEYAAELAEQALDRNLNVMMFSDNVT---LEDEIRLKTRAREKGLLVMGPDC 175 (555)
T ss_pred cccccHHHHHhcCCCCCEEEEecCHHHHHHHHHHHHHcCCeEEEEcCCCC---HHHHHHHHHHHHHcCCEEECCCC
Confidence 45566777777776666677777776666555544444444444443442 33458999999999999986555
No 445
>PRK00124 hypothetical protein; Validated
Probab=30.04 E-value=1.4e+02 Score=24.61 Aligned_cols=43 Identities=23% Similarity=0.460 Sum_probs=31.9
Q ss_pred EEEcCcHHHHH-HHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEE
Q 019543 73 ALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLL 126 (339)
Q Consensus 73 ~l~~~sG~~A~-~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~li 126 (339)
.+.+.+|..+- ..+...+++||.||+.| --|+++|=+.|+.++
T Consensus 47 ~v~V~~g~D~AD~~Iv~~~~~gDiVIT~D-----------i~LAa~~l~Kga~vl 90 (151)
T PRK00124 47 TVYVDAGFDAADNEIVQLAEKGDIVITQD-----------YGLAALALEKGAIVL 90 (151)
T ss_pred EEEeCCCCChHHHHHHHhCCCCCEEEeCC-----------HHHHHHHHHCCCEEE
Confidence 56778886555 46778899999999877 335677777777766
No 446
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=29.29 E-value=3.2e+02 Score=22.40 Aligned_cols=31 Identities=16% Similarity=0.137 Sum_probs=20.6
Q ss_pred CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCC
Q 019543 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDD 101 (339)
Q Consensus 71 ~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~ 101 (339)
..++++.+|..|...+-.|++.|-.|.+-++
T Consensus 14 ~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 14 KVVVIIGGGKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcC
Confidence 5688888888777666566666666544333
No 447
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.15 E-value=66 Score=27.98 Aligned_cols=71 Identities=20% Similarity=0.176 Sum_probs=42.7
Q ss_pred HHHHHHHhHhCCCeEEEcC---cHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCC
Q 019543 59 ALESLLAKLDKADRALCFT---SGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 59 ~le~~la~~~g~~~~l~~~---sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a 130 (339)
++-.++-+.+|.+ ++.=+ +|-+|+-.++--++.|+.|.++...=.|-..-+.+-+..||++.|++++-=..
T Consensus 81 EliA~~l~kfG~~-~IRGSs~Kgg~~Alr~l~k~Lk~G~~i~itpDgPkGp~~~~~~Gii~LA~~sg~pi~pv~~ 154 (214)
T COG2121 81 ELIARLLEKFGLR-VIRGSSNKGGISALRALLKALKQGKSIAITPDGPKGPVHKIGDGIIALAQKSGVPIIPVGV 154 (214)
T ss_pred HHHHHHHHHcCce-EEeccCCcchHHHHHHHHHHHhCCCcEEEcCCCCCCCceeccchhhHhhHhcCCCeEEEEE
Confidence 5666666677764 22222 23455555555577887766655433333333347789999999998885443
No 448
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV). This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate lyases (ADCL). BCAT catalyzes the reversible transamination reaction between the L-branched-chain amino and alpha-keto acids. DAAT catalyzes the synthesis of D-glutamic acid and D-alanine, and ADCL converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate. Except for a few enzymes, i. e., Escherichia coli and Salmonella BCATs, which are homohexamers arranged as a double trimer, the class IV PLPDEs are homodimers. Homodimer formation is required for catalytic activity.
Probab=29.07 E-value=59 Score=28.86 Aligned_cols=66 Identities=18% Similarity=0.107 Sum_probs=45.2
Q ss_pred HHHhHhCCCeEEEcCc-HH--HHHHHHHH-hcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCC
Q 019543 63 LLAKLDKADRALCFTS-GM--AALAAVTH-LLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 63 ~la~~~g~~~~l~~~s-G~--~A~~~il~-ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a 130 (339)
+-++-.|..++++++. |. ++- ... ++..|+++++++...+......++.|.++|++.|+.+.+...
T Consensus 140 ~~a~~~g~de~llld~~g~v~E~s--~sNlf~~~~~~l~TP~~~~g~L~GitR~~vl~~~~~~g~~v~e~~i 209 (256)
T cd00449 140 QEAAEAGADEALLLDDNGYVTEGS--ASNVFIVKDGELVTPPLDGGILPGITRDSVIELAKELGIKVEERPI 209 (256)
T ss_pred HHHHHcCCCEEEEECCCCcEEEcC--ceEEEEEECCEEEeCCCCCCcCcchhHHHHHHHHHHcCCeEEEEec
Confidence 3334457888998876 52 221 222 345578888887666556666668899999999999888754
No 449
>PRK10206 putative oxidoreductase; Provisional
Probab=29.02 E-value=2.4e+02 Score=26.43 Aligned_cols=67 Identities=9% Similarity=0.147 Sum_probs=42.3
Q ss_pred HHHHHHHHhHhCCCeEEE--cCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeC
Q 019543 58 DALESLLAKLDKADRALC--FTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~--~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~ 129 (339)
..+++.|++ ... ++++ +++.+.+- .++..++.|-+|++..|.-...... ++|.++|+++|+.+++--
T Consensus 54 ~~~~ell~~-~~i-D~V~I~tp~~~H~~-~~~~al~aGkhVl~EKPla~~~~ea--~~l~~~a~~~~~~l~v~~ 122 (344)
T PRK10206 54 SDLDEVLND-PDV-KLVVVCTHADSHFE-YAKRALEAGKNVLVEKPFTPTLAEA--KELFALAKSKGLTVTPYQ 122 (344)
T ss_pred CCHHHHhcC-CCC-CEEEEeCCchHHHH-HHHHHHHcCCcEEEecCCcCCHHHH--HHHHHHHHHhCCEEEEEE
Confidence 345655542 122 3443 33443332 3445678899999999876543322 789999999999988743
No 450
>PRK11106 queuosine biosynthesis protein QueC; Provisional
Probab=28.99 E-value=1.3e+02 Score=26.68 Aligned_cols=59 Identities=20% Similarity=0.222 Sum_probs=35.4
Q ss_pred eEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCC--EEEEeCC
Q 019543 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGA--LLLVDNS 130 (339)
Q Consensus 72 ~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~--~livD~a 130 (339)
-+++|++|...-.++..+.+.|++|+.-...|+.....-.+...++|++.|+ ..++|-.
T Consensus 4 vvVl~SGG~DSt~~l~~a~~~~~~v~alt~dygq~~~~El~~a~~ia~~~gi~~h~vid~~ 64 (231)
T PRK11106 4 AVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARAHKVLDVT 64 (231)
T ss_pred EEEEeeCcHHHHHHHHHHHhcCCeEEEEEEEeCCCCHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 4678999975443222224457777665555554222211667788999999 4666644
No 451
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=28.43 E-value=1.4e+02 Score=27.88 Aligned_cols=43 Identities=21% Similarity=0.312 Sum_probs=31.8
Q ss_pred HhcCCCCEEEEcCCCccchH-HHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 88 HLLGTGEEIVAGDDLYGGTD-RLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 88 ~ll~~GD~Vi~~~~~y~~~~-~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.++++.|.|+++...=.+.. .++ .+|.++|++.|+.+++|...
T Consensus 125 ~~l~~~d~VvlsGSlP~g~~~d~y-~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 125 ALLESDDIVVLSGSLPPGVPPDAY-AELIRILRQQGAKVILDTSG 168 (310)
T ss_pred HhcccCCEEEEeCCCCCCCCHHHH-HHHHHHHHhcCCeEEEECCh
Confidence 36889998887764433322 233 88999999999999999764
No 452
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=28.34 E-value=2e+02 Score=23.83 Aligned_cols=67 Identities=25% Similarity=0.347 Sum_probs=36.9
Q ss_pred HHHHHHHHhHhCCCeEEEcCcHHHHHHH--H-HHhc-----------------CCCCEEEEcCCCccchHHHHHHHHHHH
Q 019543 58 DALESLLAKLDKADRALCFTSGMAALAA--V-THLL-----------------GTGEEIVAGDDLYGGTDRLLSRKIAEM 117 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~sG~~A~~~--i-l~ll-----------------~~GD~Vi~~~~~y~~~~~~~~~~I~~l 117 (339)
+++++....+..++...++..|.+...+ + ..+. +++|.+|+-+ +.|...-+ -++++.
T Consensus 18 ~~~~~~~~~l~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~Dv~I~iS--~sG~t~~~-i~~~~~ 94 (179)
T TIGR03127 18 EELDKLADKIIKAKRIFVAGAGRSGLVGKAFAMRLMHLGFNVYVVGETTTPSIKKGDLLIAIS--GSGETESL-VTVAKK 94 (179)
T ss_pred HHHHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHHhCCCeEEEeCCcccCCCCCCCEEEEEe--CCCCcHHH-HHHHHH
Confidence 4566666666667788888888655432 1 1122 2344444322 22211111 466788
Q ss_pred HHHcCCEEEE
Q 019543 118 AHAHGALLLV 127 (339)
Q Consensus 118 a~~~g~~liv 127 (339)
|+++|+++|.
T Consensus 95 ak~~g~~ii~ 104 (179)
T TIGR03127 95 AKEIGATVAA 104 (179)
T ss_pred HHHCCCeEEE
Confidence 9999987763
No 453
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=28.17 E-value=2.9e+02 Score=23.47 Aligned_cols=15 Identities=13% Similarity=0.180 Sum_probs=9.9
Q ss_pred CCCeEEEcCcHHHHH
Q 019543 69 KADRALCFTSGMAAL 83 (339)
Q Consensus 69 g~~~~l~~~sG~~A~ 83 (339)
.+....+|..|.++.
T Consensus 43 ~~~rI~i~G~G~S~~ 57 (192)
T PRK00414 43 AGGKVLSCGNGGSHC 57 (192)
T ss_pred CCCEEEEEeCcHHHH
Confidence 346777777776555
No 454
>TIGR00268 conserved hypothetical protein TIGR00268. The N-terminal region of the model shows similarity to Argininosuccinate synthase proteins using PSI-blast and using the recognize protein identification server.
Probab=27.65 E-value=2.4e+02 Score=25.08 Aligned_cols=68 Identities=12% Similarity=0.118 Sum_probs=35.1
Q ss_pred HHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEE
Q 019543 58 DALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLV 127 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~liv 127 (339)
+.|++.|.+. ..-++.+++|.....++..+.+.|.+|++-...++.....-.+...++|++.|+...+
T Consensus 3 ~~l~~~l~~~--~~vlVa~SGGvDSs~ll~la~~~g~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~i 70 (252)
T TIGR00268 3 ENLRNFLKEF--KKVLIAYSGGVDSSLLAAVCSDAGTEVLAITVVSPSISPRELEDAIIIAKEIGVNHEF 70 (252)
T ss_pred HHHHHHHHhc--CCEEEEecCcHHHHHHHHHHHHhCCCEEEEEecCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 4566666553 2357778888644332111122266555433333322111115667889999986543
No 455
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase. Specificity is broad for various D-amino acids, and differs among members of the family; the family is designated equivalog, but with this caveat attached.
Probab=27.12 E-value=71 Score=28.94 Aligned_cols=70 Identities=10% Similarity=-0.066 Sum_probs=43.7
Q ss_pred HHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCC
Q 019543 61 ESLLAKLDKADRALCFTSGMAALAAVTH-LLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 61 e~~la~~~g~~~~l~~~sG~~A~~~il~-ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a 130 (339)
..+-|+-.|..++++++.|.-+=..... ++..++++++++...+......++.+.++|++.|+.+.+...
T Consensus 154 a~~eA~~~g~de~l~~~~g~v~E~~~sNif~v~~~~~~TP~~~~~~L~GitR~~vl~~a~~~g~~v~e~~i 224 (276)
T TIGR01121 154 AKQEAHEKGAYEAILHRGGTVTEGSSSNVYGIKDGVLYTHPANNLILNGITRMVILACAEENGIPVKEEPF 224 (276)
T ss_pred HHHHHHHcCCCEEEEecCCeEEecCceeEEEEECCEEEeCCCcCCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence 3333444577888888655311011222 344577888776655555556668889999999998887644
No 456
>TIGR03586 PseI pseudaminic acid synthase.
Probab=26.78 E-value=1.2e+02 Score=28.60 Aligned_cols=105 Identities=15% Similarity=0.242 Sum_probs=58.7
Q ss_pred CeEEEcCcHHHHHHH---HHH-hcCCCC--EEEEc-CCCccchHHHHH-HHHHHHHHHcCCEE-EEeCCcCCCCCcC--c
Q 019543 71 DRALCFTSGMAALAA---VTH-LLGTGE--EIVAG-DDLYGGTDRLLS-RKIAEMAHAHGALL-LVDNSIMSPVLSR--P 139 (339)
Q Consensus 71 ~~~l~~~sG~~A~~~---il~-ll~~GD--~Vi~~-~~~y~~~~~~~~-~~I~~la~~~g~~l-ivD~a~a~g~~~~--~ 139 (339)
..-++.++|++.+.- ... +...|. .+++. ...|+....-+. ..|..+.++++++| +.| |..|.... .
T Consensus 134 gkPvilstG~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~~~~~aA 211 (327)
T TIGR03586 134 GKPIIMSTGIATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGILAPVAA 211 (327)
T ss_pred CCcEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCchHHHHHH
Confidence 346778888866642 222 334443 45532 235665444333 77888888899999 777 87774321 2
Q ss_pred ccCCCeEEE--eccccccccCCCceEEEEEEcChhHHHHHHHHH
Q 019543 140 LELGADIVM--HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 181 (339)
Q Consensus 140 ~~~~~Di~~--~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~ 181 (339)
...|++++= +++.|.+.|+ + +.....++++.+.++..+
T Consensus 212 va~GA~iIEkH~tld~~l~G~-D---~~~Sl~p~e~~~lv~~ir 251 (327)
T TIGR03586 212 VALGACVIEKHFTLDRSDGGV-D---SAFSLEPDEFKALVKEVR 251 (327)
T ss_pred HHcCCCEEEeCCChhhcCCCC-C---hhccCCHHHHHHHHHHHH
Confidence 346777433 4567887654 2 233334455555444443
No 457
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].
Probab=26.55 E-value=3e+02 Score=23.71 Aligned_cols=72 Identities=14% Similarity=0.212 Sum_probs=42.1
Q ss_pred HHHHHHHHhHhCCC-eEEEcCcHHHHHH---HHHH-hcCCCCEEEEcCCCccchHHHHH---------------------
Q 019543 58 DALESLLAKLDKAD-RALCFTSGMAALA---AVTH-LLGTGEEIVAGDDLYGGTDRLLS--------------------- 111 (339)
Q Consensus 58 ~~le~~la~~~g~~-~~l~~~sG~~A~~---~il~-ll~~GD~Vi~~~~~y~~~~~~~~--------------------- 111 (339)
..+++-|+.+.... +.++++.-.+++. .++. +++-|.++|++=|.|+-+...++
T Consensus 62 ~Dld~gL~~f~d~sFD~VIlsqtLQ~~~~P~~vL~EmlRVgr~~IVsFPNFg~W~~R~~l~~~GrmPvt~~lPy~WYdTP 141 (193)
T PF07021_consen 62 GDLDEGLADFPDQSFDYVILSQTLQAVRRPDEVLEEMLRVGRRAIVSFPNFGHWRNRLQLLLRGRMPVTKALPYEWYDTP 141 (193)
T ss_pred CCHHHhHhhCCCCCccEEehHhHHHhHhHHHHHHHHHHHhcCeEEEEecChHHHHHHHHHHhcCCCCCCCCCCCcccCCC
Confidence 34566666554433 4555565555553 2443 56667777766555443322111
Q ss_pred -------HHHHHHHHHcCCEEEEeC
Q 019543 112 -------RKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 112 -------~~I~~la~~~g~~livD~ 129 (339)
+...++|++.|+.++.=-
T Consensus 142 Nih~~Ti~DFe~lc~~~~i~I~~~~ 166 (193)
T PF07021_consen 142 NIHLCTIKDFEDLCRELGIRIEERV 166 (193)
T ss_pred CcccccHHHHHHHHHHCCCEEEEEE
Confidence 888999999999876443
No 458
>PRK02947 hypothetical protein; Provisional
Probab=26.50 E-value=4e+02 Score=23.67 Aligned_cols=41 Identities=22% Similarity=0.264 Sum_probs=23.3
Q ss_pred HHHHHHHHHcCCEEEE--eCCcCCCC-----CcCcccCCCeEEEeccc
Q 019543 112 RKIAEMAHAHGALLLV--DNSIMSPV-----LSRPLELGADIVMHSAT 152 (339)
Q Consensus 112 ~~I~~la~~~g~~liv--D~a~a~g~-----~~~~~~~~~Di~~~S~s 152 (339)
-++++.|+++|+++|. +..++... .+.++...+|+++....
T Consensus 123 i~~~~~a~~~g~~vI~iT~~~~s~~~~~~h~~gs~l~~~ad~~l~~~~ 170 (246)
T PRK02947 123 IEMALEAKERGAKVIAVTSLAYSASVASRHSSGKRLAEVADVVLDNGA 170 (246)
T ss_pred HHHHHHHHHCCCEEEEEcCCcccccccccCCCcCchhHhCCEEEEcCC
Confidence 5678889999988764 33221100 12344445787776544
No 459
>smart00642 Aamy Alpha-amylase domain.
Probab=26.38 E-value=65 Score=26.87 Aligned_cols=20 Identities=30% Similarity=0.597 Sum_probs=18.3
Q ss_pred HHHHHHHHHcCCEEEEeCCc
Q 019543 112 RKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~ 131 (339)
+++++-||++|+.||+|-+.
T Consensus 73 ~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 73 KELVDAAHARGIKVILDVVI 92 (166)
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 88999999999999999764
No 460
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=25.37 E-value=3.9e+02 Score=22.07 Aligned_cols=14 Identities=21% Similarity=0.235 Sum_probs=8.0
Q ss_pred CCeEEEcCcHHHHH
Q 019543 70 ADRALCFTSGMAAL 83 (339)
Q Consensus 70 ~~~~l~~~sG~~A~ 83 (339)
++...++..|.++.
T Consensus 33 ~~~I~i~G~G~S~~ 46 (177)
T cd05006 33 GGKILICGNGGSAA 46 (177)
T ss_pred CCEEEEEeCcHHHH
Confidence 45566666665444
No 461
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=25.26 E-value=2.5e+02 Score=21.00 Aligned_cols=51 Identities=22% Similarity=0.333 Sum_probs=32.0
Q ss_pred chHHHHHHHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEec--ccccccc
Q 019543 105 GTDRLLSRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHS--ATKFIAG 157 (339)
Q Consensus 105 ~~~~~~~~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S--~sK~l~g 157 (339)
|+..+++.+|-++++++|+..-+|-+ ..+.. .....++|+++.| +.+.|+.
T Consensus 13 gSS~~ik~kve~~l~~~gi~~~~~~~-~v~~~-~~~~~~aDiiv~s~~l~~~~~~ 65 (93)
T COG3414 13 GSSTMIKMKVEEVLKELGIDVDVEQC-AVDEI-KALTDGADIIVTSTKLADEFED 65 (93)
T ss_pred cHHHHHHHHHHHHHHHcCCCceeeeE-Eeccc-ccCCCcccEEEEehHhhhhcCc
Confidence 34445668899999999998433333 22222 2234478999987 4566753
No 462
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=25.19 E-value=67 Score=28.86 Aligned_cols=30 Identities=20% Similarity=0.408 Sum_probs=22.4
Q ss_pred CCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 100 DDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 100 ~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
++.|+.. .-+ +++++.||++|+.||+|-+.
T Consensus 45 d~~~Gt~-~d~-~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 45 DPRFGTM-EDF-KELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp STTTBHH-HHH-HHHHHHHHHTTCEEEEEEET
T ss_pred ccccchh-hhh-hhhhhccccccceEEEeeec
Confidence 3444432 333 88999999999999999865
No 463
>PRK11302 DNA-binding transcriptional regulator HexR; Provisional
Probab=24.86 E-value=3.5e+02 Score=24.26 Aligned_cols=26 Identities=23% Similarity=0.309 Sum_probs=17.0
Q ss_pred HHHHHHHHhHhCCCeEEEcCcHHHHH
Q 019543 58 DALESLLAKLDKADRALCFTSGMAAL 83 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~sG~~A~ 83 (339)
+.+++....+..++...++..|.+..
T Consensus 116 ~~i~~~~~~i~~a~~I~i~G~G~S~~ 141 (284)
T PRK11302 116 SAINRAVDLLTQAKKISFFGLGASAA 141 (284)
T ss_pred HHHHHHHHHHHcCCeEEEEEcchHHH
Confidence 45555555566777788888775544
No 464
>PRK13938 phosphoheptose isomerase; Provisional
Probab=24.65 E-value=4.5e+02 Score=22.54 Aligned_cols=18 Identities=17% Similarity=0.178 Sum_probs=10.7
Q ss_pred HhCCCeEEEcCcHHHHHH
Q 019543 67 LDKADRALCFTSGMAALA 84 (339)
Q Consensus 67 ~~g~~~~l~~~sG~~A~~ 84 (339)
+..+...+++..|.++..
T Consensus 42 l~~g~rI~i~G~G~S~~~ 59 (196)
T PRK13938 42 YRAGARVFMCGNGGSAAD 59 (196)
T ss_pred HHCCCEEEEEeCcHHHHH
Confidence 444566777776655543
No 465
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family less similar to the DAAT family.
Probab=23.62 E-value=80 Score=29.22 Aligned_cols=73 Identities=14% Similarity=0.041 Sum_probs=44.5
Q ss_pred HHHHHHHH----hHhCCCeEEEcCc-HH----HHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEe
Q 019543 58 DALESLLA----KLDKADRALCFTS-GM----AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVD 128 (339)
Q Consensus 58 ~~le~~la----~~~g~~~~l~~~s-G~----~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD 128 (339)
.-++..++ +-.|.+++++++. |. ++-.+-+-+++.++++++++...+....+.++.|.++|++.|+.+.+-
T Consensus 159 nyl~~vla~~eA~~~g~deal~ld~~g~g~v~E~~~sNlf~v~~~g~l~Tp~l~~~~L~GItR~~vi~l~~~~Gi~v~e~ 238 (313)
T TIGR01123 159 NYAASLLAQAKAAEQGCDQVVYLDPVEHTYIEEVGAMNFFFITGDGELVTPPLSGSILPGITRDSLLQLAKDLGMEVEER 238 (313)
T ss_pred ccHHHHHHHHHHHHCCCCEEEEEeCCCCeEEEEcCcEeEEEEEcCCEEEeCCCCCCCCcchHHHHHHHHHHHcCCeEEEE
Confidence 34444444 4457888998864 22 121111112333357777666555555566688999999999998876
Q ss_pred CC
Q 019543 129 NS 130 (339)
Q Consensus 129 ~a 130 (339)
..
T Consensus 239 ~i 240 (313)
T TIGR01123 239 RI 240 (313)
T ss_pred ec
Confidence 44
No 466
>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
Probab=23.35 E-value=1.9e+02 Score=27.06 Aligned_cols=45 Identities=24% Similarity=0.224 Sum_probs=30.6
Q ss_pred chHHHHHHHHHhHhCCCeEEEcCcH-------HHHHH-----HHHHhcCCCCEEEEc
Q 019543 55 PTRDALESLLAKLDKADRALCFTSG-------MAALA-----AVTHLLGTGEEIVAG 99 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~sG-------~~A~~-----~il~ll~~GD~Vi~~ 99 (339)
...-+||++|.+.||-++|+++++- ...+. .+...+++||.|-+.
T Consensus 65 ~~~~~Le~~L~~~fgL~~a~VVp~~~~~~~~~~~~lg~aaA~~l~~~l~~gdvigV~ 121 (321)
T COG2390 65 EGCLELEQQLKERFGLKEAIVVPSDSDADDSILRRLGRAAAQYLESLLKPGDVIGVG 121 (321)
T ss_pred cchHHHHHHHHHhcCCCeEEEEcCCCCCchHHHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 3456799999999999999988852 11121 122478999965543
No 467
>PF06508 QueC: Queuosine biosynthesis protein QueC; InterPro: IPR018317 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome. In Rhizobium meliloti (Sinorhizobium meliloti), a species in which the exo genes make succinoglycan, a symbiotically important exopolysaccharide, exsB is located nearby and affects succinoglycan levels, probably through polar effects on exsA expression or the same polycistronic mRNA [, ]. In Arthrobacter viscosus, the homologous gene is designated alu1 and is associated with an aluminum tolerance phenotype. When expressed in Escherichia coli, it conferred aliminium tolerance []. The entry also contains the gene queC, which is responsible for the conversion of GTP to 7-cyano-7-deazaguanine (preQ0). The biosynthesis of hypermodified tRNA nucleoside queuosine only occurs in eubacteria. It occupies the wobble position for all known tRNAs that are specific for Asp, Asn, His or Tyr [].; PDB: 3BL5_B 2PG3_A.
Probab=23.29 E-value=88 Score=27.22 Aligned_cols=57 Identities=19% Similarity=0.226 Sum_probs=33.8
Q ss_pred eEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCC--EEEEe
Q 019543 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGA--LLLVD 128 (339)
Q Consensus 72 ~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~--~livD 128 (339)
..+++++|+....++..+.+.|++|..-...|+.....-.+...++|++.|+ ..++|
T Consensus 2 avvl~SGG~DSt~~l~~~~~~~~~v~al~~~YGq~~~~El~~a~~i~~~l~v~~~~~i~ 60 (209)
T PF06508_consen 2 AVVLFSGGLDSTTCLYWAKKEGYEVYALTFDYGQRHRRELEAAKKIAKKLGVKEHEVID 60 (209)
T ss_dssp EEEE--SSHHHHHHHHHHHHH-SEEEEEEEESSSTTCHHHHHHHHHHHHCT-SEEEEEE
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCeEEEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEee
Confidence 3678889986654433445667888776666766522222778899999997 34455
No 468
>PRK12400 D-amino acid aminotransferase; Reviewed
Probab=22.52 E-value=70 Score=29.24 Aligned_cols=68 Identities=9% Similarity=0.006 Sum_probs=43.8
Q ss_pred HHHhHhCCCeEEEcCcHHHHHHHHHH-hcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCC
Q 019543 63 LLAKLDKADRALCFTSGMAALAAVTH-LLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 63 ~la~~~g~~~~l~~~sG~~A~~~il~-ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a 130 (339)
+-|+-.|..+++++..|.-+=.+... ++..|+++++++..-+......++.|.++|++.|+.+.+...
T Consensus 163 ~ea~~~g~deaL~l~~g~v~E~t~sNif~v~~~~l~TPpl~~g~L~GItR~~llela~~~gi~v~E~~i 231 (290)
T PRK12400 163 TKAERKGCKEALFVRNGTVTEGSHSNFFLIKNGTLYTHPANHLILNGIIRQYVLSLAKTLRIPVQEELF 231 (290)
T ss_pred HHHHHcCCCEEEEEcCCEEEEcCceEEEEEECCEEEeCCCCCCcCcCHHHHHHHHHHHHcCCcEEEEeC
Confidence 33344577888888655200001112 344578888777665566666778899999999999888654
No 469
>PRK13352 thiamine biosynthesis protein ThiC; Provisional
Probab=22.16 E-value=2.8e+02 Score=26.92 Aligned_cols=25 Identities=8% Similarity=0.142 Sum_probs=19.4
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCC
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVL 136 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~ 136 (339)
++|.+||++|++.|=.=+....|..
T Consensus 209 D~lLeI~~~yDVtlSLGDglRPG~i 233 (431)
T PRK13352 209 DYLLEILKEYDVTLSLGDGLRPGCI 233 (431)
T ss_pred HHHHHHHHHhCeeeeccCCcCCCcc
Confidence 8888999999888877776665544
No 470
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=20.79 E-value=3.1e+02 Score=25.89 Aligned_cols=39 Identities=23% Similarity=0.380 Sum_probs=30.8
Q ss_pred HHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEe
Q 019543 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVD 128 (339)
Q Consensus 86 il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD 128 (339)
+..+++.|-+|++..|.- . .-. +++.++|+++|+.+++.
T Consensus 83 a~~aL~aGkHVL~EKPla--~-~Ea-~el~~~A~~~g~~l~v~ 121 (343)
T TIGR01761 83 ARALLARGIHVLQEHPLH--P-RDI-QDLLRLAERQGRRYLVN 121 (343)
T ss_pred HHHHHhCCCeEEEcCCCC--H-HHH-HHHHHHHHHcCCEEEEE
Confidence 444678999999999984 1 111 88999999999999983
No 471
>PF01269 Fibrillarin: Fibrillarin; InterPro: IPR000692 Fibrillarin is a component of a nucleolar small nuclear ribonucleoprotein (SnRNP), functioning in vivo in ribosomal RNA processing [, ]. It is associated with U3, U8 and U13 small nuclear RNAs in mammals [] and is similar to the yeast NOP1 protein []. Fibrillarin has a well conserved sequence of around 320 amino acids, and contains 3 domains, an N-terminal Gly/Arg-rich region; a central domain resembling other RNA-binding proteins and containing an RNP-2-like consensus sequence; and a C-terminal alpha-helical domain. An evolutionarily related pre-rRNA processing protein, which lacks the Gly/Arg-rich domain, has been found in various archaebacteria.; GO: 0003723 RNA binding, 0008168 methyltransferase activity, 0006364 rRNA processing, 0008033 tRNA processing; PDB: 3PLA_E 3ID6_C 3ID5_B 1NT2_A 3NVK_J 2NNW_B 3NVM_B 3NMU_J 1PRY_A 1G8A_A ....
Probab=20.33 E-value=3.1e+02 Score=24.27 Aligned_cols=75 Identities=21% Similarity=0.257 Sum_probs=36.7
Q ss_pred CCCCchHHHHHHHHHhHh------CCCeEEEcC--cHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHc-
Q 019543 51 RSGNPTRDALESLLAKLD------KADRALCFT--SGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAH- 121 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~------g~~~~l~~~--sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~- 121 (339)
|..+|.+..|-..+-.=. ....+|... ||+..- -+.-.+.+...|.+-....... ++|.++|+++
T Consensus 49 R~W~P~RSKLaAai~~Gl~~~~ik~gskVLYLGAasGTTVS-HvSDIvg~~G~VYaVEfs~r~~-----rdL~~la~~R~ 122 (229)
T PF01269_consen 49 RVWNPFRSKLAAAILKGLENIPIKPGSKVLYLGAASGTTVS-HVSDIVGPDGVVYAVEFSPRSM-----RDLLNLAKKRP 122 (229)
T ss_dssp EEE-TTT-HHHHHHHTT-S--S--TT-EEEEETTTTSHHHH-HHHHHHTTTSEEEEEESSHHHH-----HHHHHHHHHST
T ss_pred eecCchhhHHHHHHHcCccccCCCCCCEEEEecccCCCccc-hhhhccCCCCcEEEEEecchhH-----HHHHHHhccCC
Confidence 456777777766553311 122344332 333221 1333566666666544332222 7788999886
Q ss_pred CCE-EEEeCCc
Q 019543 122 GAL-LLVDNSI 131 (339)
Q Consensus 122 g~~-livD~a~ 131 (339)
|+. ++.|+.+
T Consensus 123 NIiPIl~DAr~ 133 (229)
T PF01269_consen 123 NIIPILEDARH 133 (229)
T ss_dssp TEEEEES-TTS
T ss_pred ceeeeeccCCC
Confidence 654 6666554
No 472
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed
Probab=20.28 E-value=83 Score=28.28 Aligned_cols=66 Identities=20% Similarity=0.172 Sum_probs=41.7
Q ss_pred HHHhHhCCCeEEEcC-cHH--HHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeC
Q 019543 63 LLAKLDKADRALCFT-SGM--AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 63 ~la~~~g~~~~l~~~-sG~--~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~ 129 (339)
+-|+--|..++++++ .|. ++-.+-+ ++..|+++++++...++.....++.|.++|++.|+.+.+=.
T Consensus 152 ~~A~~~g~de~l~l~~~g~v~E~s~sNi-f~v~~~~~~TP~~~~~~L~GitR~~vl~~~~~~g~~v~e~~ 220 (268)
T PRK06092 152 AELEQTEADEALVLDSEGWVIECCAANL-FWRKGGVVYTPDLDQCGVAGVMRQFILELLAQSGYPVVEVD 220 (268)
T ss_pred HHHHhcCCCEEEEECCCCCEEEccceEE-EEEECCEEECCCccccCcccHHHHHHHHHHHHcCCeEEEEE
Confidence 333445778899886 552 2211111 34457888876654454555666889999999998887643
No 473
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase. Members of this protein family are aminodeoxychorismate lyase (ADC lyase), EC 4.1.3.38, the PabC protein of PABA biosynthesis. PABA (para-aminobenzoate) is a precursor of folate, needed for de novo purine biosynthesis. This enzyme is a pyridoxal-phosphate-binding protein in the class IV aminotransferase family (pfam01063).
Probab=20.07 E-value=80 Score=28.23 Aligned_cols=70 Identities=17% Similarity=0.238 Sum_probs=44.7
Q ss_pred HHHHHHHhHhCCCeEEEcC-cHH--HHHHHHHH-hcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCC
Q 019543 59 ALESLLAKLDKADRALCFT-SGM--AALAAVTH-LLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 59 ~le~~la~~~g~~~~l~~~-sG~--~A~~~il~-ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a 130 (339)
.+..+-|+-.|..++++++ .|. ++ +... ++..|+++++++...+....+.++.|.++|++.|+.+.+-..
T Consensus 146 ~~a~~~A~~~g~de~llln~~g~v~E~--s~sNif~~~~~~l~TP~~~~~~L~GItR~~il~~~~~~g~~v~E~~i 219 (261)
T TIGR03461 146 VLIKAELENSEADEALVLDTDGNVVEC--TAANIFWRKGNQVFTPDLSYCGVAGVMRQHVLALLPALGYEIEEVKA 219 (261)
T ss_pred HHHHHHhhhcCCCEEEEECCCCCEEEe--ccEEEEEEECCEEECCCccccCcccHHHHHHHHHHHHcCCeEEEEec
Confidence 4444445556888899886 341 11 1222 344577887766544445556668889999999998887654
No 474
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=20.01 E-value=3.2e+02 Score=24.96 Aligned_cols=61 Identities=26% Similarity=0.295 Sum_probs=33.8
Q ss_pred cCCCCEEEEcCCCccchHH----HHH------------HHHHHHHHHcCCEEEEeCCcCCCCC--cCcc-cCCCeEEEec
Q 019543 90 LGTGEEIVAGDDLYGGTDR----LLS------------RKIAEMAHAHGALLLVDNSIMSPVL--SRPL-ELGADIVMHS 150 (339)
Q Consensus 90 l~~GD~Vi~~~~~y~~~~~----~~~------------~~I~~la~~~g~~livD~a~a~g~~--~~~~-~~~~Di~~~S 150 (339)
++|||.|++..-. +|.-. +++ .+=.++|+++|+--.+|.....-+. .+.. +.|+|++.-|
T Consensus 144 vkpGhtVlvhaAA-GGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDs 222 (336)
T KOG1197|consen 144 VKPGHTVLVHAAA-GGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDS 222 (336)
T ss_pred CCCCCEEEEEecc-ccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeecc
Confidence 7899999986432 33322 122 4556777888877666654321110 0111 3467877766
Q ss_pred c
Q 019543 151 A 151 (339)
Q Consensus 151 ~ 151 (339)
.
T Consensus 223 v 223 (336)
T KOG1197|consen 223 V 223 (336)
T ss_pred c
Confidence 4
Done!