Query 019543
Match_columns 339
No_of_seqs 266 out of 2227
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 03:25:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019543.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019543hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nmy_A Xometc, cystathionine g 100.0 4.3E-56 1.5E-60 426.3 33.9 331 5-335 16-397 (400)
2 3ri6_A O-acetylhomoserine sulf 100.0 1.7E-56 5.8E-61 432.4 30.1 327 8-335 26-430 (430)
3 3ndn_A O-succinylhomoserine su 100.0 3E-54 1E-58 415.2 34.1 330 6-335 24-414 (414)
4 1qgn_A Protein (cystathionine 100.0 4.5E-51 1.5E-55 395.9 35.9 333 4-337 51-445 (445)
5 2fq6_A Cystathionine beta-lyas 100.0 5.7E-51 1.9E-55 392.4 32.4 325 8-337 25-414 (415)
6 3qhx_A Cystathionine gamma-syn 100.0 5.8E-50 2E-54 382.7 35.7 326 7-335 16-392 (392)
7 3cog_A Cystathionine gamma-lya 100.0 4.3E-48 1.5E-52 371.1 35.0 331 6-336 16-397 (403)
8 3acz_A Methionine gamma-lyase; 100.0 1.5E-47 5.1E-52 365.6 37.3 331 6-337 3-389 (389)
9 1n8p_A Cystathionine gamma-lya 100.0 2.2E-46 7.6E-51 358.1 32.9 334 4-337 3-391 (393)
10 2ctz_A O-acetyl-L-homoserine s 100.0 2.7E-46 9.1E-51 360.6 33.0 328 8-335 2-421 (421)
11 2cb1_A O-acetyl homoserine sul 100.0 3.2E-44 1.1E-48 344.9 35.3 329 8-337 2-412 (412)
12 1gc0_A Methionine gamma-lyase; 100.0 3.3E-44 1.1E-48 343.3 31.0 332 5-336 6-396 (398)
13 1ibj_A CBL, cystathionine beta 100.0 8.1E-42 2.8E-46 332.9 35.1 334 6-339 84-464 (464)
14 1e5e_A MGL, methionine gamma-l 100.0 2E-41 6.9E-46 324.8 33.8 329 7-336 6-394 (404)
15 2rfv_A Methionine gamma-lyase; 100.0 6.1E-40 2.1E-44 313.4 34.3 336 1-337 1-396 (398)
16 1cs1_A CGS, protein (cystathio 100.0 1.2E-39 4.1E-44 310.0 34.3 327 8-337 4-383 (386)
17 1pff_A Methionine gamma-lyase; 100.0 1.2E-32 3.9E-37 256.0 26.9 280 58-337 1-330 (331)
18 3i16_A Aluminum resistance pro 100.0 1.8E-27 6E-32 229.0 21.4 275 45-337 66-425 (427)
19 3hvy_A Cystathionine beta-lyas 100.0 4.1E-27 1.4E-31 226.4 23.2 271 45-337 67-425 (427)
20 3jzl_A Putative cystathionine 99.9 2.2E-26 7.6E-31 220.4 22.0 270 45-336 52-407 (409)
21 3ju7_A Putative PLP-dependent 99.9 1.4E-23 4.7E-28 199.1 21.0 265 54-337 35-371 (377)
22 3frk_A QDTB; aminotransferase, 99.9 3.5E-23 1.2E-27 195.1 22.7 264 53-338 34-365 (373)
23 3nyt_A Aminotransferase WBPE; 99.9 1.3E-22 4.4E-27 191.1 23.3 263 53-337 33-360 (367)
24 2w8t_A SPT, serine palmitoyltr 99.9 2.1E-22 7E-27 193.8 23.6 241 53-335 107-409 (427)
25 3uwc_A Nucleotide-sugar aminot 99.9 6.5E-22 2.2E-26 186.2 20.8 263 53-336 36-366 (374)
26 3tqx_A 2-amino-3-ketobutyrate 99.9 1.8E-21 6.3E-26 184.3 23.3 242 53-337 86-396 (399)
27 3ht4_A Aluminum resistance pro 99.9 3.1E-22 1.1E-26 193.0 17.4 213 46-276 59-345 (431)
28 3dr4_A Putative perosamine syn 99.9 2.8E-21 9.7E-26 183.2 21.5 264 53-337 54-389 (391)
29 3kki_A CAI-1 autoinducer synth 99.9 4.4E-21 1.5E-25 183.1 22.5 238 53-335 102-398 (409)
30 1b9h_A AHBA synthase, protein 99.9 2.8E-21 9.4E-26 183.0 20.7 266 51-336 34-383 (388)
31 1bs0_A Protein (8-amino-7-oxon 99.9 7.9E-21 2.7E-25 179.5 23.4 240 53-336 82-382 (384)
32 2oga_A Transaminase; PLP-depen 99.9 7.7E-21 2.6E-25 181.0 22.7 262 54-336 62-391 (399)
33 1mdo_A ARNB aminotransferase; 99.9 3.8E-21 1.3E-25 182.0 20.5 264 53-336 37-381 (393)
34 1fc4_A 2-amino-3-ketobutyrate 99.9 1.1E-20 3.7E-25 179.6 23.4 239 54-335 89-391 (401)
35 3op7_A Aminotransferase class 99.9 3.5E-21 1.2E-25 181.3 19.5 243 53-337 61-371 (375)
36 3a2b_A Serine palmitoyltransfe 99.9 3.7E-20 1.2E-24 175.8 26.5 244 49-336 82-391 (398)
37 2c81_A Glutamine-2-deoxy-scyll 99.9 2.1E-20 7.2E-25 179.0 24.6 265 53-336 40-409 (418)
38 2fnu_A Aminotransferase; prote 99.9 1.5E-20 5.1E-25 176.6 21.6 263 54-336 31-367 (375)
39 3nra_A Aspartate aminotransfer 99.9 1.1E-20 3.7E-25 179.7 20.5 246 51-336 78-404 (407)
40 2dr1_A PH1308 protein, 386AA l 99.9 1.5E-20 5.3E-25 177.0 21.2 241 54-335 52-373 (386)
41 1t3i_A Probable cysteine desul 99.9 6.8E-21 2.3E-25 181.5 17.8 250 54-335 71-407 (420)
42 3euc_A Histidinol-phosphate am 99.9 2.4E-20 8.1E-25 175.1 20.3 234 52-335 64-362 (367)
43 3dzz_A Putative pyridoxal 5'-p 99.9 5.4E-20 1.8E-24 173.8 22.1 253 46-337 57-389 (391)
44 3b8x_A WBDK, pyridoxamine 5-ph 99.9 5E-20 1.7E-24 174.7 21.3 262 53-335 32-390 (390)
45 3hdo_A Histidinol-phosphate am 99.8 8.7E-20 3E-24 171.1 22.2 235 52-336 62-350 (360)
46 3kax_A Aminotransferase, class 99.8 1.8E-19 6E-24 169.7 24.4 249 46-335 54-379 (383)
47 4dq6_A Putative pyridoxal phos 99.8 1.2E-19 4.1E-24 171.4 22.9 249 46-335 62-387 (391)
48 3lvm_A Cysteine desulfurase; s 99.8 3.4E-20 1.2E-24 177.2 18.6 254 53-335 66-393 (423)
49 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 1.7E-19 5.9E-24 173.8 23.0 268 53-336 60-431 (437)
50 3ftb_A Histidinol-phosphate am 99.8 2.4E-19 8.1E-24 167.7 23.0 238 53-335 59-359 (361)
51 3cai_A Possible aminotransfera 99.8 6E-20 2.1E-24 174.6 18.3 255 47-337 61-405 (406)
52 3lws_A Aromatic amino acid bet 99.8 2.4E-20 8.3E-25 174.4 15.2 211 53-283 45-320 (357)
53 1kmj_A Selenocysteine lyase; p 99.8 1.7E-19 5.9E-24 170.8 21.2 247 54-336 66-400 (406)
54 2bwn_A 5-aminolevulinate synth 99.8 5.8E-19 2E-23 167.7 24.5 240 53-336 89-395 (401)
55 3ffh_A Histidinol-phosphate am 99.8 3.2E-19 1.1E-23 167.1 22.0 234 53-336 65-361 (363)
56 2a7v_A Serine hydroxymethyltra 99.8 7.7E-20 2.6E-24 178.5 18.2 251 46-335 85-439 (490)
57 4hvk_A Probable cysteine desul 99.8 5.4E-20 1.8E-24 172.5 16.5 259 47-335 35-367 (382)
58 2e7j_A SEP-tRNA:Cys-tRNA synth 99.8 4E-20 1.4E-24 173.4 15.3 247 49-335 47-364 (371)
59 3zrp_A Serine-pyruvate aminotr 99.8 2.6E-19 8.8E-24 168.4 20.6 238 54-334 34-356 (384)
60 2dou_A Probable N-succinyldiam 99.8 5.5E-19 1.9E-23 166.4 22.6 238 55-336 63-373 (376)
61 2z61_A Probable aspartate amin 99.8 3.7E-19 1.3E-23 167.2 21.0 233 56-334 67-364 (370)
62 2po3_A 4-dehydrase; external a 99.8 6.3E-19 2.1E-23 169.1 22.8 213 54-281 51-328 (424)
63 1jg8_A L-ALLO-threonine aldola 99.8 4.9E-20 1.7E-24 171.5 14.7 235 53-335 36-340 (347)
64 3vax_A Putative uncharacterize 99.8 2.8E-20 9.5E-25 176.4 12.8 261 47-336 55-395 (400)
65 1lc5_A COBD, L-threonine-O-3-p 99.8 6.5E-19 2.2E-23 165.3 22.0 236 54-335 58-358 (364)
66 3get_A Histidinol-phosphate am 99.8 3.6E-19 1.2E-23 166.9 19.8 231 54-335 64-361 (365)
67 3fdb_A Beta C-S lyase, putativ 99.8 1.1E-19 3.7E-24 171.0 16.0 241 58-337 61-376 (377)
68 1elu_A L-cysteine/L-cystine C- 99.8 3.6E-19 1.2E-23 167.8 19.5 239 55-337 59-388 (390)
69 1fg7_A Histidinol phosphate am 99.8 1.6E-18 5.3E-23 162.6 23.4 233 54-337 57-354 (356)
70 1gd9_A Aspartate aminotransfer 99.8 3.8E-19 1.3E-23 168.2 19.3 242 56-338 64-387 (389)
71 3ly1_A Putative histidinol-pho 99.8 2.6E-19 8.8E-24 167.1 17.7 235 53-336 49-351 (354)
72 2o1b_A Aminotransferase, class 99.8 1.2E-18 4.1E-23 166.2 22.5 240 55-335 85-401 (404)
73 2x5d_A Probable aminotransfera 99.8 1.3E-18 4.4E-23 166.1 22.4 241 55-336 75-397 (412)
74 3aow_A Putative uncharacterize 99.8 1.4E-18 4.9E-23 168.2 22.9 241 56-335 119-443 (448)
75 3jtx_A Aminotransferase; NP_28 99.8 3.5E-18 1.2E-22 161.8 25.1 242 55-335 70-392 (396)
76 3fkd_A L-threonine-O-3-phospha 99.8 7E-19 2.4E-23 164.1 19.7 238 53-335 48-340 (350)
77 1j32_A Aspartate aminotransfer 99.8 8.9E-19 3E-23 165.6 20.6 208 57-283 69-354 (388)
78 3g0t_A Putative aminotransfera 99.8 9.1E-19 3.1E-23 168.1 20.8 244 57-335 84-435 (437)
79 4eb5_A Probable cysteine desul 99.8 2.8E-19 9.6E-24 168.1 16.6 262 47-335 35-367 (382)
80 1o69_A Aminotransferase; struc 99.8 4.3E-18 1.5E-22 161.7 24.7 261 54-336 31-382 (394)
81 1iug_A Putative aspartate amin 99.8 1.8E-18 6.1E-23 160.8 21.5 238 55-335 34-342 (352)
82 3dyd_A Tyrosine aminotransfera 99.8 3.6E-18 1.2E-22 164.1 24.3 240 54-335 95-422 (427)
83 1o4s_A Aspartate aminotransfer 99.8 1.4E-18 4.9E-23 164.7 21.1 207 55-283 78-356 (389)
84 3ezs_A Aminotransferase ASPB; 99.8 2.7E-18 9.3E-23 161.4 22.8 233 57-335 61-373 (376)
85 1u08_A Hypothetical aminotrans 99.8 1.9E-18 6.7E-23 163.2 21.8 239 57-336 69-385 (386)
86 3h14_A Aminotransferase, class 99.8 1.8E-18 6.2E-23 163.7 21.5 240 57-335 70-380 (391)
87 2gb3_A Aspartate aminotransfer 99.8 2.3E-18 7.9E-23 164.3 22.0 242 56-335 80-400 (409)
88 2r2n_A Kynurenine/alpha-aminoa 99.8 3.7E-18 1.3E-22 163.8 23.5 245 54-335 81-422 (425)
89 2zyj_A Alpha-aminodipate amino 99.8 1E-18 3.5E-23 165.9 19.2 242 55-335 74-391 (397)
90 1b5p_A Protein (aspartate amin 99.8 2.2E-18 7.6E-23 163.1 21.3 234 57-335 70-379 (385)
91 1c7n_A Cystalysin; transferase 99.8 4.4E-18 1.5E-22 161.4 23.4 239 57-335 68-391 (399)
92 1xi9_A Putative transaminase; 99.8 2.7E-18 9.3E-23 163.5 22.0 240 56-336 79-402 (406)
93 3piu_A 1-aminocyclopropane-1-c 99.8 1.4E-18 4.7E-23 167.2 19.9 238 56-335 87-430 (435)
94 3pj0_A LMO0305 protein; struct 99.8 3.9E-19 1.3E-23 166.2 15.6 229 53-322 46-340 (359)
95 1vjo_A Alanine--glyoxylate ami 99.8 1.4E-18 4.7E-23 164.5 19.4 241 54-335 66-389 (393)
96 3nnk_A Ureidoglycine-glyoxylat 99.8 1.4E-18 4.8E-23 165.1 19.6 241 55-336 46-389 (411)
97 3l8a_A METC, putative aminotra 99.8 2E-18 6.9E-23 165.4 20.4 248 46-334 91-415 (421)
98 3ffr_A Phosphoserine aminotran 99.8 2.6E-18 8.9E-23 160.2 20.3 239 55-336 43-359 (362)
99 2dkj_A Serine hydroxymethyltra 99.8 1.3E-18 4.5E-23 165.2 18.1 246 53-336 63-387 (407)
100 3nx3_A Acoat, acetylornithine 99.8 8.6E-19 2.9E-23 166.3 16.8 239 47-335 70-389 (395)
101 1v2d_A Glutamine aminotransfer 99.8 9E-18 3.1E-22 158.4 23.5 222 56-320 62-352 (381)
102 1eg5_A Aminotransferase; PLP-d 99.8 1.8E-18 6.1E-23 162.6 18.6 254 54-336 43-375 (384)
103 3isl_A Purine catabolism prote 99.8 3.5E-18 1.2E-22 162.6 20.7 242 54-336 43-389 (416)
104 2zc0_A Alanine glyoxylate tran 99.8 4.4E-18 1.5E-22 161.8 20.9 242 56-336 76-403 (407)
105 1m32_A 2-aminoethylphosphonate 99.8 2E-18 6.9E-23 161.0 18.2 240 55-336 37-360 (366)
106 1bw0_A TAT, protein (tyrosine 99.8 4.7E-18 1.6E-22 162.2 20.8 240 55-335 75-411 (416)
107 3ei9_A LL-diaminopimelate amin 99.8 7.7E-18 2.6E-22 161.7 22.3 225 55-320 98-409 (432)
108 3ruy_A Ornithine aminotransfer 99.8 9.1E-19 3.1E-23 165.9 15.4 234 52-336 75-389 (392)
109 2z9v_A Aspartate aminotransfer 99.8 4.4E-18 1.5E-22 160.8 19.6 242 55-336 42-370 (392)
110 3p1t_A Putative histidinol-pho 99.8 4.9E-18 1.7E-22 157.2 19.5 230 53-336 49-332 (337)
111 3n0l_A Serine hydroxymethyltra 99.8 5.9E-18 2E-22 161.2 20.0 245 53-335 65-387 (417)
112 3f9t_A TDC, L-tyrosine decarbo 99.8 1.4E-18 5E-23 163.6 15.5 234 54-336 68-393 (397)
113 1vp4_A Aminotransferase, putat 99.8 5.1E-18 1.7E-22 162.8 19.1 241 56-335 86-416 (425)
114 3qgu_A LL-diaminopimelate amin 99.8 1E-17 3.6E-22 161.6 21.0 239 55-335 111-438 (449)
115 1d2f_A MALY protein; aminotran 99.8 3E-17 1E-21 155.3 23.7 224 57-321 65-371 (390)
116 2o0r_A RV0858C (N-succinyldiam 99.8 1E-17 3.4E-22 159.9 20.5 248 57-336 64-391 (411)
117 4adb_A Succinylornithine trans 99.8 5.9E-18 2E-22 160.7 18.5 240 50-335 76-394 (406)
118 2huf_A Alanine glyoxylate amin 99.8 1E-17 3.4E-22 158.4 19.7 241 54-335 51-381 (393)
119 3tcm_A Alanine aminotransferas 99.8 3.6E-17 1.2E-21 160.5 24.0 242 56-336 139-493 (500)
120 3ele_A Amino transferase; RER0 99.8 2.6E-17 8.9E-22 156.0 22.1 236 56-335 81-394 (398)
121 1yiz_A Kynurenine aminotransfe 99.8 3.3E-17 1.1E-21 157.1 22.9 240 57-334 79-422 (429)
122 3fvs_A Kynurenine--oxoglutarat 99.8 2.2E-17 7.5E-22 157.7 21.7 244 57-336 69-421 (422)
123 3kgw_A Alanine-glyoxylate amin 99.8 8.2E-18 2.8E-22 158.5 18.0 243 54-336 55-387 (393)
124 2aeu_A Hypothetical protein MJ 99.8 1.2E-17 4.2E-22 157.8 19.1 157 56-217 59-269 (374)
125 3e2y_A Kynurenine-oxoglutarate 99.8 1.7E-17 5.8E-22 157.8 20.2 243 57-337 63-409 (410)
126 2vi8_A Serine hydroxymethyltra 99.8 1.2E-17 4E-22 158.5 18.8 247 53-337 63-387 (405)
127 3cq5_A Histidinol-phosphate am 99.8 2.8E-17 9.5E-22 154.6 21.2 201 57-282 71-338 (369)
128 3ppl_A Aspartate aminotransfer 99.8 1.3E-17 4.3E-22 160.0 18.7 242 55-335 78-418 (427)
129 3b46_A Aminotransferase BNA3; 99.8 5.8E-17 2E-21 156.6 22.8 243 57-336 97-442 (447)
130 2x5f_A Aspartate_tyrosine_phen 99.8 3.7E-17 1.3E-21 156.8 21.1 234 56-336 89-428 (430)
131 1iay_A ACC synthase 2, 1-amino 99.8 4.3E-17 1.5E-21 156.3 21.2 237 57-335 85-425 (428)
132 2eh6_A Acoat, acetylornithine 99.8 6.7E-18 2.3E-22 158.7 14.9 231 53-336 68-373 (375)
133 1rv3_A Serine hydroxymethyltra 99.8 2.6E-17 9E-22 160.8 18.8 171 53-228 84-347 (483)
134 3g7q_A Valine-pyruvate aminotr 99.8 9.1E-17 3.1E-21 153.1 21.9 212 54-284 74-372 (417)
135 3ihj_A Alanine aminotransferas 99.8 1.4E-16 4.8E-21 156.2 23.6 181 47-228 125-406 (498)
136 2bkw_A Alanine-glyoxylate amin 99.7 1.5E-16 5.2E-21 149.5 22.5 241 56-337 39-384 (385)
137 2yrr_A Aminotransferase, class 99.7 2.8E-17 9.5E-22 152.5 17.1 208 55-283 33-317 (353)
138 3ecd_A Serine hydroxymethyltra 99.7 3.9E-17 1.3E-21 155.8 18.5 206 56-282 78-351 (425)
139 3t18_A Aminotransferase class 99.7 6.7E-17 2.3E-21 154.1 20.1 232 55-336 83-409 (413)
140 2ch1_A 3-hydroxykynurenine tra 99.7 5.4E-17 1.8E-21 153.5 19.2 241 55-335 51-381 (396)
141 3h7f_A Serine hydroxymethyltra 99.7 3.4E-17 1.2E-21 158.3 18.0 245 53-336 85-413 (447)
142 3f0h_A Aminotransferase; RER07 99.7 4.7E-17 1.6E-21 152.8 18.4 237 55-335 52-368 (376)
143 3gbx_A Serine hydroxymethyltra 99.7 4.2E-17 1.5E-21 155.3 18.1 204 57-281 78-349 (420)
144 3ke3_A Putative serine-pyruvat 99.7 8.4E-17 2.9E-21 152.1 19.9 241 55-335 35-374 (379)
145 2oat_A Ornithine aminotransfer 99.7 2.2E-17 7.4E-22 159.5 15.8 236 53-335 116-433 (439)
146 3ez1_A Aminotransferase MOCR f 99.7 2E-16 6.7E-21 151.4 21.7 242 55-335 70-413 (423)
147 2pb2_A Acetylornithine/succiny 99.7 7.4E-17 2.5E-21 154.7 18.5 232 53-334 97-411 (420)
148 1z7d_A Ornithine aminotransfer 99.7 5.7E-17 2E-21 156.2 16.6 234 53-335 105-423 (433)
149 3rq1_A Aminotransferase class 99.7 1.5E-16 5.2E-21 151.9 18.9 230 57-337 82-415 (418)
150 1vef_A Acetylornithine/acetyl- 99.7 4.4E-17 1.5E-21 154.4 14.4 234 53-336 85-392 (395)
151 3asa_A LL-diaminopimelate amin 99.7 4.2E-16 1.4E-20 148.2 21.2 209 55-283 75-358 (400)
152 3bwn_A AT1G70560, L-tryptophan 99.7 1.8E-16 6.2E-21 150.6 18.3 247 57-336 70-382 (391)
153 3e9k_A Kynureninase; kynurenin 99.7 1.2E-16 4E-21 155.1 16.2 236 55-335 111-455 (465)
154 1uu1_A Histidinol-phosphate am 99.7 4.9E-16 1.7E-20 144.1 19.2 224 55-337 56-334 (335)
155 2c0r_A PSAT, phosphoserine ami 99.7 2.2E-16 7.6E-21 147.8 16.2 235 55-336 49-356 (362)
156 3if2_A Aminotransferase; YP_26 99.7 2.2E-16 7.4E-21 152.0 16.4 211 55-284 83-398 (444)
157 2ord_A Acoat, acetylornithine 99.7 4.4E-17 1.5E-21 154.6 11.0 235 53-335 80-395 (397)
158 3dxv_A Alpha-amino-epsilon-cap 99.7 3.7E-16 1.3E-20 150.4 17.2 239 47-334 78-418 (439)
159 1v72_A Aldolase; PLP-dependent 99.7 2.7E-15 9.2E-20 139.5 22.5 232 53-336 41-348 (356)
160 1qz9_A Kynureninase; kynurenin 99.7 6E-16 2.1E-20 147.3 17.8 235 54-334 70-395 (416)
161 3d6k_A Putative aminotransfera 99.7 1.1E-15 3.9E-20 146.3 19.6 240 57-335 78-416 (422)
162 1ax4_A Tryptophanase; tryptoph 99.7 1.5E-15 5.1E-20 147.1 20.5 251 53-335 74-435 (467)
163 3hbx_A GAD 1, glutamate decarb 99.7 3E-16 1E-20 154.0 15.5 245 53-335 89-442 (502)
164 3b1d_A Betac-S lyase; HET: PLP 99.5 2.4E-18 8.2E-23 163.1 0.0 225 57-321 68-375 (392)
165 4ffc_A 4-aminobutyrate aminotr 99.7 6.4E-16 2.2E-20 149.7 16.3 241 47-335 99-443 (453)
166 3dod_A Adenosylmethionine-8-am 99.7 2.2E-16 7.6E-21 152.6 12.5 235 51-335 83-437 (448)
167 2x3l_A ORN/Lys/Arg decarboxyla 99.7 1.9E-15 6.6E-20 146.1 19.1 231 52-336 54-352 (446)
168 3a8u_X Omega-amino acid--pyruv 99.7 7.8E-16 2.7E-20 148.6 16.1 238 51-335 89-441 (449)
169 3oks_A 4-aminobutyrate transam 99.7 1.2E-15 4.3E-20 147.6 17.2 240 48-335 97-445 (451)
170 3gju_A Putative aminotransfera 99.7 3.2E-15 1.1E-19 144.9 20.0 238 50-335 90-450 (460)
171 3mc6_A Sphingosine-1-phosphate 99.7 6.2E-16 2.1E-20 151.2 14.6 232 58-336 110-436 (497)
172 3a9z_A Selenocysteine lyase; P 99.7 9E-16 3.1E-20 147.0 15.4 258 55-335 61-422 (432)
173 7aat_A Aspartate aminotransfer 99.7 3.4E-15 1.2E-19 141.6 19.2 167 57-224 73-336 (401)
174 3mad_A Sphingosine-1-phosphate 99.7 7E-16 2.4E-20 151.7 14.9 237 53-336 133-468 (514)
175 4a6r_A Omega transaminase; tra 99.7 1.6E-15 5.6E-20 147.0 16.9 239 47-335 86-443 (459)
176 3tfu_A Adenosylmethionine-8-am 99.7 1.7E-15 5.7E-20 147.0 16.6 209 50-280 113-420 (457)
177 1s0a_A Adenosylmethionine-8-am 99.7 5.2E-15 1.8E-19 141.8 19.8 236 51-336 82-419 (429)
178 1c4k_A Protein (ornithine deca 99.7 5.1E-15 1.8E-19 150.7 20.5 174 54-229 172-444 (730)
179 4f4e_A Aromatic-amino-acid ami 99.7 6.1E-15 2.1E-19 141.1 19.9 167 57-224 94-355 (420)
180 3i4j_A Aminotransferase, class 99.6 7.9E-15 2.7E-19 140.6 20.2 242 51-334 68-421 (430)
181 2eo5_A 419AA long hypothetical 99.6 9.1E-15 3.1E-19 139.9 20.2 231 50-335 81-412 (419)
182 3ou5_A Serine hydroxymethyltra 99.6 4.6E-15 1.6E-19 140.5 17.4 251 45-335 84-439 (490)
183 1svv_A Threonine aldolase; str 99.6 5.5E-15 1.9E-19 137.4 17.7 239 47-336 41-353 (359)
184 3vp6_A Glutamate decarboxylase 99.6 5.6E-15 1.9E-19 145.3 18.2 247 47-336 125-500 (511)
185 1sff_A 4-aminobutyrate aminotr 99.6 6.5E-15 2.2E-19 140.7 17.8 234 53-335 82-418 (426)
186 2fyf_A PSAT, phosphoserine ami 99.6 7.3E-15 2.5E-19 139.5 17.8 235 55-335 78-392 (398)
187 3f6t_A Aspartate aminotransfer 99.6 2.2E-15 7.4E-20 149.0 14.5 104 71-175 165-334 (533)
188 1w23_A Phosphoserine aminotran 99.6 9.6E-16 3.3E-20 143.0 11.4 236 55-336 48-355 (360)
189 2dgk_A GAD-beta, GADB, glutama 99.6 5.9E-15 2E-19 142.7 16.4 242 58-335 84-428 (452)
190 3hmu_A Aminotransferase, class 99.6 6.3E-15 2.2E-19 143.5 16.6 237 49-335 93-446 (472)
191 1zod_A DGD, 2,2-dialkylglycine 99.6 1.4E-14 4.9E-19 138.9 18.5 238 52-335 82-426 (433)
192 3i5t_A Aminotransferase; pyrid 99.6 8.6E-15 3E-19 142.7 17.2 234 51-334 93-447 (476)
193 2qma_A Diaminobutyrate-pyruvat 99.6 1.3E-14 4.5E-19 142.1 18.2 241 53-335 134-490 (497)
194 3fsl_A Aromatic-amino-acid ami 99.6 2.5E-14 8.7E-19 135.2 19.6 168 57-225 72-334 (397)
195 1wyu_B Glycine dehydrogenase s 99.6 1.6E-15 5.4E-20 147.8 11.4 241 55-335 107-435 (474)
196 1ajs_A Aspartate aminotransfer 99.6 3.8E-14 1.3E-18 134.9 20.6 170 55-225 74-345 (412)
197 1yaa_A Aspartate aminotransfer 99.6 2.9E-14 9.9E-19 135.8 19.6 170 55-225 73-345 (412)
198 2z67_A O-phosphoseryl-tRNA(SEC 99.6 3.9E-15 1.3E-19 144.3 13.7 241 56-337 134-454 (456)
199 2oqx_A Tryptophanase; lyase, p 99.6 1E-14 3.5E-19 141.1 16.3 250 53-334 72-435 (467)
200 3k40_A Aromatic-L-amino-acid d 99.6 2.2E-14 7.6E-19 139.8 18.7 206 53-277 107-429 (475)
201 2ez2_A Beta-tyrosinase, tyrosi 99.6 2.7E-14 9.2E-19 137.9 19.0 167 53-224 73-332 (456)
202 4eu1_A Mitochondrial aspartate 99.6 5.3E-14 1.8E-18 133.9 20.7 170 55-225 79-345 (409)
203 2q7w_A Aspartate aminotransfer 99.6 2.3E-14 7.9E-19 135.4 17.8 171 54-225 68-333 (396)
204 4e1o_A HDC, histidine decarbox 99.6 2.7E-14 9.2E-19 139.4 18.3 209 47-276 108-435 (481)
205 3n5m_A Adenosylmethionine-8-am 99.6 2E-14 6.9E-19 138.8 16.7 240 52-335 88-446 (452)
206 2hox_A ALLIIN lyase 1; cystein 99.6 5.2E-14 1.8E-18 135.3 19.4 232 57-320 102-406 (427)
207 3meb_A Aspartate aminotransfer 99.6 7.8E-14 2.7E-18 134.7 20.3 169 55-224 94-371 (448)
208 2ay1_A Aroat, aromatic amino a 99.6 1.3E-14 4.5E-19 137.1 14.1 169 55-224 69-329 (394)
209 3l44_A Glutamate-1-semialdehyd 99.6 2.5E-14 8.7E-19 137.2 15.1 206 53-281 93-399 (434)
210 1wyu_A Glycine dehydrogenase ( 99.6 9E-14 3.1E-18 133.8 19.0 236 55-336 108-435 (438)
211 1js3_A DDC;, DOPA decarboxylas 99.6 1E-13 3.5E-18 135.2 19.0 147 112-277 255-432 (486)
212 2cjg_A L-lysine-epsilon aminot 99.6 1.2E-13 4.1E-18 133.5 18.4 231 51-335 97-442 (449)
213 2vyc_A Biodegradative arginine 99.6 5.6E-14 1.9E-18 144.0 16.6 171 53-226 203-466 (755)
214 2epj_A Glutamate-1-semialdehyd 99.6 6.1E-14 2.1E-18 134.7 15.8 207 52-282 93-401 (434)
215 3k28_A Glutamate-1-semialdehyd 99.6 2.1E-14 7.3E-19 137.7 12.6 206 53-281 91-396 (429)
216 2okj_A Glutamate decarboxylase 99.5 1.6E-13 5.6E-18 134.4 18.9 175 53-229 126-410 (504)
217 3k7y_A Aspartate aminotransfer 99.5 8E-13 2.7E-17 126.2 23.0 163 58-222 75-333 (405)
218 4e77_A Glutamate-1-semialdehyd 99.5 3.7E-14 1.3E-18 136.0 13.0 207 53-282 91-399 (429)
219 2e7u_A Glutamate-1-semialdehyd 99.5 4.3E-13 1.5E-17 128.3 17.4 205 53-282 90-397 (424)
220 2cy8_A D-phgat, D-phenylglycin 99.5 3.4E-13 1.1E-17 130.3 16.7 203 53-279 95-404 (453)
221 2jis_A Cysteine sulfinic acid 99.5 1.7E-12 6E-17 127.5 21.6 170 58-229 151-425 (515)
222 3fq8_A Glutamate-1-semialdehyd 99.5 1.5E-13 5.2E-18 131.5 13.2 205 53-281 90-396 (427)
223 1ohv_A 4-aminobutyrate aminotr 99.5 1.1E-12 3.9E-17 127.5 16.9 167 112-335 282-465 (472)
224 2zy4_A L-aspartate beta-decarb 99.4 3.1E-12 1.1E-16 126.7 18.8 106 71-177 166-338 (546)
225 3n75_A LDC, lysine decarboxyla 99.4 1.4E-12 4.7E-17 132.1 15.9 167 55-225 195-443 (715)
226 3e77_A Phosphoserine aminotran 99.4 3.7E-12 1.3E-16 120.2 17.4 235 55-336 58-370 (377)
227 2yky_A Beta-transaminase; tran 99.1 2.3E-14 8E-19 138.9 0.0 211 52-282 137-432 (465)
228 4h51_A Aspartate aminotransfer 99.3 8.2E-11 2.8E-15 112.6 18.5 113 57-170 89-281 (420)
229 3qm2_A Phosphoserine aminotran 99.3 8.2E-11 2.8E-15 111.4 17.9 236 54-336 71-380 (386)
230 3m5u_A Phosphoserine aminotran 99.3 1.5E-10 5E-15 108.7 17.0 231 55-336 50-355 (361)
231 4atq_A 4-aminobutyrate transam 99.3 1E-10 3.5E-15 113.0 16.3 234 55-336 107-454 (456)
232 4ao9_A Beta-phenylalanine amin 99.2 9E-11 3.1E-15 113.2 13.1 164 54-223 126-360 (454)
233 3bc8_A O-phosphoseryl-tRNA(SEC 99.2 1.6E-10 5.4E-15 110.8 13.1 164 57-225 100-338 (450)
234 4e3q_A Pyruvate transaminase; 99.2 3.4E-09 1.2E-13 102.8 21.2 175 112-336 260-467 (473)
235 4a0g_A Adenosylmethionine-8-am 99.0 5.6E-10 1.9E-14 115.3 10.7 173 112-334 619-821 (831)
236 3hl2_A O-phosphoseryl-tRNA(SEC 99.0 1.1E-09 3.7E-14 104.4 11.5 149 72-225 136-356 (501)
237 3bzy_B ESCU; auto cleavage pro 58.7 5.8 0.0002 28.2 2.4 19 112-130 30-48 (83)
238 4ew6_A D-galactose-1-dehydroge 53.7 46 0.0016 29.6 8.3 75 55-131 67-141 (330)
239 2vt1_B Surface presentation of 52.1 8.4 0.00029 27.9 2.4 19 112-130 30-48 (93)
240 3t7y_A YOP proteins translocat 51.0 8.1 0.00028 28.3 2.2 19 112-130 45-63 (97)
241 3c01_E Surface presentation of 49.9 8.6 0.0003 28.2 2.2 18 112-129 30-47 (98)
242 3sho_A Transcriptional regulat 49.3 48 0.0016 26.4 7.1 33 112-150 104-138 (187)
243 2dc1_A L-aspartate dehydrogena 47.6 56 0.0019 27.4 7.5 60 72-132 52-112 (236)
244 1vim_A Hypothetical protein AF 42.5 1E+02 0.0036 24.9 8.2 85 58-149 35-139 (200)
245 3efb_A Probable SOR-operon reg 41.2 50 0.0017 28.5 6.2 43 56-98 12-66 (266)
246 1m3s_A Hypothetical protein YC 40.2 1.3E+02 0.0046 23.6 9.2 66 58-126 25-110 (186)
247 3uuw_A Putative oxidoreductase 39.4 67 0.0023 28.0 6.9 45 85-131 82-126 (308)
248 3b1s_B Flagellar biosynthetic 45.3 6.4 0.00022 28.2 0.0 20 112-131 30-49 (87)
249 2jli_A YSCU, YOP proteins tran 36.3 18 0.00062 27.6 2.2 19 112-130 74-92 (123)
250 3kv1_A Transcriptional repress 35.8 75 0.0026 27.4 6.5 41 58-98 10-61 (267)
251 3bzs_A ESCU; auto cleavage pro 35.2 19 0.00065 28.0 2.2 19 112-130 84-102 (137)
252 3fxa_A SIS domain protein; str 35.2 1.3E+02 0.0043 24.2 7.6 51 90-149 90-142 (201)
253 3m2t_A Probable dehydrogenase; 35.0 1.4E+02 0.0047 26.7 8.4 71 57-131 57-128 (359)
254 3dty_A Oxidoreductase, GFO/IDH 34.1 1.2E+02 0.0043 27.4 8.1 71 58-131 70-145 (398)
255 1pjq_A CYSG, siroheme synthase 33.3 64 0.0022 30.3 6.0 61 71-131 13-107 (457)
256 3kux_A Putative oxidoreductase 33.1 1E+02 0.0034 27.5 7.2 68 58-129 57-125 (352)
257 2jlj_A YSCU, YOP proteins tran 33.0 22 0.00074 28.0 2.2 19 112-130 83-101 (144)
258 3o9z_A Lipopolysaccaride biosy 32.6 1.1E+02 0.0039 26.7 7.3 44 86-131 89-132 (312)
259 3ohs_X Trans-1,2-dihydrobenzen 31.5 1.1E+02 0.0037 26.9 7.1 44 86-131 83-126 (334)
260 3u3x_A Oxidoreductase; structu 31.2 1.2E+02 0.0042 27.1 7.4 58 72-131 90-148 (361)
261 3v5n_A Oxidoreductase; structu 30.6 1.4E+02 0.0048 27.3 7.9 45 85-131 126-170 (417)
262 3ip3_A Oxidoreductase, putativ 30.6 1.7E+02 0.006 25.6 8.3 72 56-131 55-129 (337)
263 3b0z_B Flagellar biosynthetic 36.2 11 0.00038 28.4 0.0 20 112-131 30-49 (114)
264 2yva_A DNAA initiator-associat 30.0 2.1E+02 0.0071 22.7 8.3 15 112-126 126-140 (196)
265 3oa2_A WBPB; oxidoreductase, s 29.8 1.4E+02 0.0047 26.2 7.4 43 86-130 90-132 (318)
266 4fb5_A Probable oxidoreductase 29.3 1.4E+02 0.0049 26.5 7.6 53 76-131 102-154 (393)
267 3i23_A Oxidoreductase, GFO/IDH 29.2 1.2E+02 0.0041 26.9 7.0 44 85-130 81-124 (349)
268 3evn_A Oxidoreductase, GFO/IDH 28.7 1.3E+02 0.0043 26.5 7.0 72 57-131 56-127 (329)
269 3rc1_A Sugar 3-ketoreductase; 28.2 1.2E+02 0.0042 26.9 6.8 45 85-131 105-149 (350)
270 3fhl_A Putative oxidoreductase 28.2 1.2E+02 0.004 27.1 6.7 70 58-131 55-125 (362)
271 3e18_A Oxidoreductase; dehydro 28.1 1.3E+02 0.0043 27.0 6.9 69 59-131 56-125 (359)
272 4gqa_A NAD binding oxidoreduct 27.6 1.4E+02 0.0048 27.1 7.3 44 86-131 113-156 (412)
273 2xhz_A KDSD, YRBH, arabinose 5 27.4 1.1E+02 0.0039 23.9 5.9 26 59-84 37-63 (183)
274 3oqb_A Oxidoreductase; structu 26.6 1.2E+02 0.0041 27.2 6.5 70 58-131 73-143 (383)
275 4gmf_A Yersiniabactin biosynth 26.5 59 0.002 29.7 4.3 43 85-131 86-128 (372)
276 3moi_A Probable dehydrogenase; 26.5 1.7E+02 0.0058 26.4 7.5 70 59-131 55-124 (387)
277 2p2s_A Putative oxidoreductase 26.2 1.5E+02 0.005 26.1 6.9 45 85-131 82-126 (336)
278 3e82_A Putative oxidoreductase 25.8 1.5E+02 0.0053 26.4 7.0 44 85-130 83-126 (364)
279 3e9m_A Oxidoreductase, GFO/IDH 25.6 1.4E+02 0.0049 26.1 6.8 45 85-131 83-127 (330)
280 3gdo_A Uncharacterized oxidore 24.5 1.3E+02 0.0046 26.7 6.4 45 85-131 81-125 (358)
281 1lc0_A Biliverdin reductase A; 24.5 1.3E+02 0.0043 26.2 6.0 45 85-131 81-125 (294)
282 4hkt_A Inositol 2-dehydrogenas 24.0 1.9E+02 0.0066 25.2 7.3 45 85-131 79-123 (331)
283 1zh8_A Oxidoreductase; TM0312, 23.7 1.8E+02 0.006 25.7 6.9 45 85-131 98-142 (340)
284 2ho3_A Oxidoreductase, GFO/IDH 23.3 2E+02 0.0069 25.0 7.2 58 72-131 64-122 (325)
285 1ydw_A AX110P-like protein; st 23.2 2E+02 0.0069 25.5 7.3 43 85-129 87-129 (362)
286 3ezy_A Dehydrogenase; structur 22.8 1.8E+02 0.0063 25.5 6.9 46 85-132 80-125 (344)
287 1nri_A Hypothetical protein HI 22.0 3.2E+02 0.011 23.7 8.2 26 59-84 60-85 (306)
288 2glx_A 1,5-anhydro-D-fructose 21.6 2E+02 0.0067 25.0 6.8 44 85-130 78-121 (332)
289 3f4l_A Putative oxidoreductase 21.4 1.4E+02 0.0048 26.4 5.8 70 58-131 55-125 (345)
290 3db2_A Putative NADPH-dependen 21.3 1.6E+02 0.0055 26.1 6.2 45 85-131 82-126 (354)
291 3q2i_A Dehydrogenase; rossmann 20.9 2.5E+02 0.0084 24.8 7.4 45 85-131 91-135 (354)
292 3mz0_A Inositol 2-dehydrogenas 20.9 1.8E+02 0.0061 25.6 6.4 45 85-131 82-127 (344)
293 3vup_A Beta-1,4-mannanase; TIM 20.4 60 0.002 27.9 3.0 18 112-129 93-110 (351)
No 1
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=100.00 E-value=4.3e-56 Score=426.26 Aligned_cols=331 Identities=44% Similarity=0.716 Sum_probs=305.6
Q ss_pred CCCCccceeeccCCCCC-CCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHH
Q 019543 5 EEPGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAAL 83 (339)
Q Consensus 5 ~~~~~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~ 83 (339)
.+++++|+++|++...+ .++++++|||++++|.+++..+..+|.|+|.++|..++||++|++++|.+++++++||++|+
T Consensus 16 ~~~~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~l~g~~~~~~~~sG~~Ai 95 (400)
T 3nmy_A 16 RALSLATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSRTHNPTRFAYERCVAALEGGTRAFAFASGMAAT 95 (400)
T ss_dssp -CCCHHHHHHHTTCCCCTTTCBSSCCBCCCSBBBCSBTTBSSSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHH
T ss_pred cCCCcchheeeCCCCCCCCCCCcCCCccccceeeccCccccCCcccccCCCHHHHHHHHHHHHHhCCCCEEEecCHHHHH
Confidence 45688999999997665 48999999999999999988777889999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCccchHHH-----HH-------------------------------------------HHHH
Q 019543 84 AAVTHLLGTGEEIVAGDDLYGGTDRL-----LS-------------------------------------------RKIA 115 (339)
Q Consensus 84 ~~il~ll~~GD~Vi~~~~~y~~~~~~-----~~-------------------------------------------~~I~ 115 (339)
.+++.++++||+|+++++.|+++... +. ++|+
T Consensus 96 ~~~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~ 175 (400)
T 3nmy_A 96 STVMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIA 175 (400)
T ss_dssp HHHHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHHHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHH
Confidence 87777899999999999999876543 21 9999
Q ss_pred HHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEE-EEEEcChhHHHHHHHHHHhcCCCCChHHHH
Q 019543 116 EMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAG-VLAVKGERLAKELYFLQNAEGSGLAPFDCW 194 (339)
Q Consensus 116 ~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG-~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~ 194 (339)
++|++||+++|+|++|+++....++..++|++++|++|+++|+++.+|| +++++++++.+.++.....++..++|+.++
T Consensus 176 ~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~ 255 (400)
T 3nmy_A 176 VIARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSF 255 (400)
T ss_dssp HHHHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHH
T ss_pred HHHHHcCCEEEEECCCcccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 9999999999999999988777788889999999999999999888999 777777788888888887889999999999
Q ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCC
Q 019543 195 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTK 273 (339)
Q Consensus 195 ~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~ 273 (339)
+++++++++..|++++.+|+++++++|+++|.|..|.||+++++|+|++++++++|.|++++|++.+ .+.+.+|+++|+
T Consensus 256 ~~l~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~ 335 (400)
T 3nmy_A 256 LALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTE 335 (400)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCS
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999954 466889999999
Q ss_pred cceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 274 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 274 ~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.+++++|+|+.+|++.+|+.++|..++++.+.++|+.+++||+|+|+|+++|+|++|.+||+
T Consensus 336 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 336 LFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp SSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred cceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999997
No 2
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=100.00 E-value=1.7e-56 Score=432.45 Aligned_cols=327 Identities=33% Similarity=0.451 Sum_probs=257.4
Q ss_pred CccceeeccCCCCC-CCCCccccccccceeeCCCCCC--------CCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCc
Q 019543 8 GVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (339)
Q Consensus 8 ~~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~s 78 (339)
.++|+++|++...+ .++++.+|||+|+||.+++.++ ..+|.|+|.++|++++||+++++++|.+.+++++|
T Consensus 26 ~~~t~~~h~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~s 105 (430)
T 3ri6_A 26 GFTTRALHVPKAKRDVHGALRTPVYDNAAFEFENSDEIAQVSLGRALGHVYSRSSNPTVEDLEQRLKNLTGALGVLALGS 105 (430)
T ss_dssp CHHHHHHCCC--------------------------------------------CCHHHHHHHHHHHHHHTCSEEEEESC
T ss_pred CcchhheeCCCCCCCCCCCcCCCcccccccccCCHHHHHHHhhcccCCccccCCCCHHHHHHHHHHHHHHCCCcEEEECC
Confidence 36899999987654 4899999999999999987642 35689999999999999999999999999999999
Q ss_pred HHHHHHH-HHHhcCCCCEEEEcCCCccchHHHH----H------------------------------------------
Q 019543 79 GMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLL----S------------------------------------------ 111 (339)
Q Consensus 79 G~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~----~------------------------------------------ 111 (339)
|++|+.+ +.++++|||+|+++++.|+++...+ .
T Consensus 106 G~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~~d 185 (430)
T 3ri6_A 106 GMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQVAD 185 (430)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCCeecC
Confidence 9999985 4568999999999999998877633 1
Q ss_pred -HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcCh-hH----------------
Q 019543 112 -RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-RL---------------- 173 (339)
Q Consensus 112 -~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~-~l---------------- 173 (339)
++|+++|++||++||+|++|+.+...++...|+|++++|+||+++|+++.+||+++.+.. .+
T Consensus 186 l~~i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~ 265 (430)
T 3ri6_A 186 LEALSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPM 265 (430)
T ss_dssp HHHHHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGG
T ss_pred HHHHHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchh
Confidence 999999999999999999999998888888899999999999999998899999986432 12
Q ss_pred --HHHHHH-HHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCC
Q 019543 174 --AKELYF-LQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 250 (339)
Q Consensus 174 --~~~l~~-~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~ 250 (339)
+.+++. ....+|..++|+.+++++++++++..|++++.+|+++++++|+++|+|+.|.||+++++|+|+++++++ |
T Consensus 266 ~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~-g 344 (430)
T 3ri6_A 266 AFLYKARKEVFQNLGPSLSPHNAYLQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQF-R 344 (430)
T ss_dssp HHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHC-S
T ss_pred hHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhC-C
Confidence 222222 234578889999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred Ccc-eEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHH
Q 019543 251 AGS-VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISD 329 (339)
Q Consensus 251 ~~~-ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~ 329 (339)
.|+ +++|++++.+.+.+|+++|+.+++++|+|+.+|++++|++++|+.++++++++.|+.+++||+|||+|+.+|+|++
T Consensus 345 ~Gg~~lsf~l~~~~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~~~dl~~d 424 (430)
T 3ri6_A 345 YAGSILTFELESKEASYRFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEEIEDLKED 424 (430)
T ss_dssp SCCSEEEEECSSHHHHHHHHHHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSSCHHHHHHH
T ss_pred CCceEEEEEECCHHHHHHHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHH
Confidence 999 9999998888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 019543 330 LDKALR 335 (339)
Q Consensus 330 l~~al~ 335 (339)
|.+||+
T Consensus 425 l~~al~ 430 (430)
T 3ri6_A 425 ILQALC 430 (430)
T ss_dssp HHHHHC
T ss_pred HHHhhC
Confidence 999985
No 3
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3e-54 Score=415.20 Aligned_cols=330 Identities=34% Similarity=0.554 Sum_probs=299.5
Q ss_pred CCCccceeeccCCCCCCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcC
Q 019543 6 EPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (339)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~ 77 (339)
.++++|+++|++...+.++++.+|||+|++|.+++.+ ...+|.|+|+.+|..++||+++++++|.+++++++
T Consensus 24 ~~~~~t~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~~~~~ 103 (414)
T 3ndn_A 24 GVSQATVGVRGGMLRSGFEETAEAMYLTSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFATA 103 (414)
T ss_dssp TCCHHHHHHHTTCCCCTTCBSSCCBCCCSBBCCSSHHHHHHHHTTSSCCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CCCccceeeecCCCCCCCCCcCCCcccCCceecCChHHHHHHHhCCcCCcCcCCCCChHHHHHHHHHHHHHCCCcEEEEC
Confidence 4678999999997767789999999999999998763 34679999999999999999999999999999999
Q ss_pred cHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH---------------------------------------------
Q 019543 78 SGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------------- 111 (339)
Q Consensus 78 sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------------- 111 (339)
||++|+.+ +..+++|||+|+++++.|+++...+.
T Consensus 104 sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~t~~v~le~p~NptG~~~ 183 (414)
T 3ndn_A 104 SGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQSLV 183 (414)
T ss_dssp SHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSCCSEEEEESSCTTTCCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCccc
Confidence 99999985 44589999999999999998765442
Q ss_pred --HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCC
Q 019543 112 --RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 189 (339)
Q Consensus 112 --~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~ 189 (339)
++|+++|++||++||+|++|+++....++..++|++++|+||+++++|+.++|+++++++.+.+.++.....+|..++
T Consensus 184 ~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~ 263 (414)
T 3ndn_A 184 DIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMS 263 (414)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCC
T ss_pred cHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999887777778889999999999999988788999998764333366666667788899
Q ss_pred hHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-----HHH
Q 019543 190 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----LAL 264 (339)
Q Consensus 190 ~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-----~~~ 264 (339)
+..+++++++++++..|++++.+|+++++++|+++|.+..+.||+++++|+|++++++++|.|++++|.+.+ .+.
T Consensus 264 ~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~ 343 (414)
T 3ndn_A 264 AFNAWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQR 343 (414)
T ss_dssp HHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999954 677
Q ss_pred HHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 265 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 265 ~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+.+|+++|+.+++++|+|+.+|++++|+.++|+.++++.+.++|+.+++||||+|+|+.+|+|++|.+||+
T Consensus 344 ~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~e~~~dli~dl~~al~ 414 (414)
T 3ndn_A 344 AFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADIDRALS 414 (414)
T ss_dssp HHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred HHHHHHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999984
No 4
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=100.00 E-value=4.5e-51 Score=395.91 Aligned_cols=333 Identities=33% Similarity=0.555 Sum_probs=298.9
Q ss_pred CCCCCc-cceeeccCCCCC---CCCCccccccccceeeCCCCCC--------CCCCcccCCCCchHHHHHHHHHhHhCCC
Q 019543 4 EEEPGV-STLLMNFSNEFD---PYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKAD 71 (339)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~---~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~~~~~~le~~la~~~g~~ 71 (339)
...+.| +|+++|++...+ .++++.+|||+|+||.+++.++ ..+|.|+|..+|..++||+++++++|++
T Consensus 51 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~Pi~~t~t~~~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~lA~l~g~~ 130 (445)
T 1qgn_A 51 ASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAE 130 (445)
T ss_dssp CTTCCSHHHHHHHTTTTTCCSSCCSBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHTCS
T ss_pred cccCCCcccEEEecCCCCCcCCCCCCcCCCcccCCceecCCHHHHHhhhccccCCccccCCCChHHHHHHHHHHHHhCCC
Confidence 345667 899999987654 4899999999999999987542 3578999999999999999999999999
Q ss_pred eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------------------------------
Q 019543 72 RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------- 111 (339)
Q Consensus 72 ~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------- 111 (339)
++++|+||++|+.+++ .++++||+|+++++.|+++..++.
T Consensus 131 ~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tv~lV~le~p~ 210 (445)
T 1qgn_A 131 STLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTESPT 210 (445)
T ss_dssp EEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEEESSC
T ss_pred cEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCCCCEEEEeCCC
Confidence 9999999999998644 588999999999999988765421
Q ss_pred ---------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH
Q 019543 112 ---------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 182 (339)
Q Consensus 112 ---------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~ 182 (339)
++|.++|++||+++++|++|+.++...++..++|++++|+||+++|++++++|++++++ ++++.++....
T Consensus 211 NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~-~l~~~l~~~~~ 289 (445)
T 1qgn_A 211 NPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPL-KLVSEIRNLHH 289 (445)
T ss_dssp TTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECH-HHHHHHHHHHH
T ss_pred CCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccccccccceEEEEEECH-HHHHHHHHHHH
Confidence 99999999999999999999988777777789999999999999998877889999875 68888877777
Q ss_pred hcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-
Q 019543 183 AEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS- 261 (339)
Q Consensus 183 ~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~- 261 (339)
.+|..++|..+++++++++++..|++++.++++++.++|+++|++..+.||+++++|+|+++++++++.+++++|.+++
T Consensus 290 ~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~ 369 (445)
T 1qgn_A 290 ILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD 369 (445)
T ss_dssp HHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC
T ss_pred HhCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC
Confidence 7888899999998899999999999999999999999999999998899999999999999999998899999999854
Q ss_pred HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 262 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 262 ~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
.+.+.+|++.|+.+++++|+|+.+|++.+|+.++|..++.+.+..+|++++.||||+|.|+.+++|++|.++|+++
T Consensus 370 ~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~Edid~li~~L~~al~~~ 445 (445)
T 1qgn_A 370 LLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDSI 445 (445)
T ss_dssp HHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCSSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 4568899999999999999999999999999999999999999999999999999999999999999999999764
No 5
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=100.00 E-value=5.7e-51 Score=392.35 Aligned_cols=325 Identities=26% Similarity=0.448 Sum_probs=289.1
Q ss_pred CccceeeccCCCCC-CCCCccccccccceeeCCCCC--------C-CCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcC
Q 019543 8 GVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------E-NGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (339)
Q Consensus 8 ~~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~~~~~--------~-~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~ 77 (339)
+++|+++|++...+ .++++.+|||+|+||.+++.+ + ..+|.|+|.++|++++||+++|+++|++++++|+
T Consensus 25 ~~~t~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~s 104 (415)
T 2fq6_A 25 KLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFP 104 (415)
T ss_dssp CHHHHHHHTTCCHHHHTTBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTSCCCTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CcCceeEeCCCCCCCCCCCEeCCeecccceeeCCHHHHHHhhccccCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeC
Confidence 57899999987654 489999999999999998753 1 3569999999999999999999999999999999
Q ss_pred cHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------------------------------------
Q 019543 78 SGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------------------------------------- 111 (339)
Q Consensus 78 sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------------------- 111 (339)
||++|+.+++ .+++|||+|+++++.|+++...+.
T Consensus 105 sGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~tklV~~e~~~NptG~v~ 184 (415)
T 2fq6_A 105 CGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVH 184 (415)
T ss_dssp SHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTTEEEEEEESSCTTTCCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccCCcEEEEECCCCCCCEee
Confidence 9999998654 588999999999999998875542
Q ss_pred --HHHHHHHHH--cCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCC
Q 019543 112 --RKIAEMAHA--HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 187 (339)
Q Consensus 112 --~~I~~la~~--~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~ 187 (339)
++|+++|++ ||+++++|++|+.++...++..++|++++|+||+++++++.++|++++++ ++++.++..++.+|..
T Consensus 185 dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~-~~~~~l~~~~~~~G~~ 263 (415)
T 2fq6_A 185 DVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNA-RCWEQLRENAYLMGQM 263 (415)
T ss_dssp CHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECT-TTHHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCH-HHHHHHHHHHHhcCCC
Confidence 999999999 99999999999988777788889999999999999999888889999886 5778888777777888
Q ss_pred CChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC---HHH
Q 019543 188 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LAL 264 (339)
Q Consensus 188 ~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~---~~~ 264 (339)
++|..++++++++++++.|++++.+|+++++++|+++|.+..+.||+++++|+|+++++++++.+++++|.+++ .++
T Consensus 264 ~~~~~a~~~~~~l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~ 343 (415)
T 2fq6_A 264 VDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEE 343 (415)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHH
T ss_pred CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHH
Confidence 99999998889999999999999999999999999999999999999999999999998888889999999965 567
Q ss_pred HHHHHccCCcceeecccCCcccceec--cccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 265 SKHVVETTKYFSITVSFGSVKSLISM--PCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 265 ~~~~~~~L~~~~i~v~~G~~~s~~~~--p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+.+|++.|+.+++++|+|+.+|++.+ |+.++|.... +.+|+.+++||||+|.|+++|+|++|.+||+++
T Consensus 344 ~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~----~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~~ 414 (415)
T 2fq6_A 344 LANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQ----GEIDFSGTLIRLHIGLEDVDDLIADLDAGFARI 414 (415)
T ss_dssp HHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTT----CCCCCCSCEEEEECCSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCcCeEeccCCCCceeEEecCCCccccccch----hhcCCCCCEEEEEecCCCHHHHHHHHHHHHHhh
Confidence 89999999999999999999999988 8877764310 246778899999999999999999999999864
No 6
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=100.00 E-value=5.8e-50 Score=382.72 Aligned_cols=326 Identities=43% Similarity=0.721 Sum_probs=296.3
Q ss_pred CCccceeeccCCCCCC-CCCccccccccceeeCCCCCCC-CCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHH
Q 019543 7 PGVSTLLMNFSNEFDP-YGALSTPLYQTATFKQPSATEN-GPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA 84 (339)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~~~~~~pi~~~~~~~~~~~~~~-~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~ 84 (339)
.+++|+++|++..+++ ++++.+|||++++|.+++..+. .+|.|+|..+|..++||+++++++|.+++++++||++|+.
T Consensus 16 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~la~~~g~~~~~~~~sGt~A~~ 95 (392)
T 3qhx_A 16 AGLATRAIHSGYRPDPATGAVNAPIYASSTFAQDGVGGLRGGYEYARTGNPTRTALEAALAAVEDAAFGRAFSSGMAAAD 95 (392)
T ss_dssp CCHHHHHHHSSCCCCTTTCBSSCCBCCCSBBCCSSTTCCBTTBCBTTTCCHHHHHHHHHHHHHTTCSEEEEESSHHHHHH
T ss_pred CCcchhheeCCCCCCCCCCCccCCcccCcceEecCcccccCCccccCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHH
Confidence 3678999999976654 8999999999999999877643 4799999999999999999999999999999999999998
Q ss_pred HH-HHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHHH
Q 019543 85 AV-THLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIAE 116 (339)
Q Consensus 85 ~i-l~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~ 116 (339)
++ ..++++||+|+++++.|+++...+. ++|.+
T Consensus 96 ~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~ 175 (392)
T 3qhx_A 96 CALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQ 175 (392)
T ss_dssp HHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHH
Confidence 64 4588999999999999988765542 99999
Q ss_pred HHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHH
Q 019543 117 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 196 (339)
Q Consensus 117 la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~ 196 (339)
+|++||+++|+|++|+.++..++...++|++++|+||+++++++.++|+++++++++.+.++.....++..++|..++++
T Consensus 176 la~~~g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~ 255 (392)
T 3qhx_A 176 LGADSSAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLT 255 (392)
T ss_dssp HHHHHTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred HHHHcCCEEEEECCCcccccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 99999999999999998887788888999999999999999887889999998767888888877778999999999999
Q ss_pred HhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCCcc
Q 019543 197 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYF 275 (339)
Q Consensus 197 ~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~~~ 275 (339)
+++++++..|++++.+++++++++|++++.+..+.||+++++|+|+++++++++.|++++|.+.+ .+.+.+|++.|+.+
T Consensus 256 ~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~ 335 (392)
T 3qhx_A 256 MRGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIF 335 (392)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSS
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999854 67788999999999
Q ss_pred eeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 276 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 276 ~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
++++|+|+.++++++|..++|..++.+ .+|+.+++||||+|.|+++++|++|.+||+
T Consensus 336 ~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~g~~~~~iRlSvg~e~~~~~i~~l~~al~ 392 (392)
T 3qhx_A 336 ILAESLGSVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLDDLKQALG 392 (392)
T ss_dssp EECSCCCCSSCEEECGGGTSCGGGBTT---BCCCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred eECCCCCCCCceeeCcccccccccCHH---HcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 999999999999999999999887754 788999999999999999999999999984
No 7
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=100.00 E-value=4.3e-48 Score=371.14 Aligned_cols=331 Identities=42% Similarity=0.721 Sum_probs=285.1
Q ss_pred CCCccceeeccCCCCC-CC-CCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHH
Q 019543 6 EPGVSTLLMNFSNEFD-PY-GALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAAL 83 (339)
Q Consensus 6 ~~~~~~~~~~~~~~~~-~~-~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~ 83 (339)
.++++|+++|+|...+ .+ +++.+|||++|||.+++..+..+|.|+|+.+|..++||+++++++|.+++++++||++|+
T Consensus 16 ~~~~~t~~~h~g~~~~~~~~~~~~~pi~~stt~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~i~~~sG~~ai 95 (403)
T 3cog_A 16 FQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAAT 95 (403)
T ss_dssp CTTHHHHHHHTTCCGGGSTTCBSSCCBCCCSCBCCC--------------CHHHHHHHHHHHHHHTCSEEEEESCHHHHH
T ss_pred cCCcccEEEeCCCCCCcCCCCCccCCeeccceeecCCccccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEECCHHHHH
Confidence 3578899999987644 46 899999999999999877666678999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHHH
Q 019543 84 AAVTHLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIAE 116 (339)
Q Consensus 84 ~~il~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~ 116 (339)
.+++.++++||+|+++++.|+++...+. ++|++
T Consensus 96 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~ 175 (403)
T 3cog_A 96 VTITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAH 175 (403)
T ss_dssp HHHHTTSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHH
Confidence 8654488999999999999988654321 99999
Q ss_pred HHHHcC-CEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHH
Q 019543 117 MAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 195 (339)
Q Consensus 117 la~~~g-~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~ 195 (339)
+|++|| +++|+|++|+.+....++..++|++++|+||+++|++++++|+++++++++.+.++.....++..++++.+++
T Consensus 176 la~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~ 255 (403)
T 3cog_A 176 IVHKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYL 255 (403)
T ss_dssp HHTSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred HHHHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 999999 9999999999887767777889999999999999988777899998766788888877777788889999999
Q ss_pred HHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-CHHHHHHHHccCCc
Q 019543 196 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKY 274 (339)
Q Consensus 196 ~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-~~~~~~~~~~~L~~ 274 (339)
+.+++++++.|++++.+|+..+++++++++.|+.+.+|+++++|+++++.++.++.+++++|.+. ..+.+.+|+++++.
T Consensus 256 ~~~~l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~l~~~~i 335 (403)
T 3cog_A 256 CNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKL 335 (403)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSS
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCc
Confidence 89999999999999999999999999999999999999999999999988887788999999984 45667889999988
Q ss_pred ceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 275 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 275 ~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+..++|+|+.+|++.+|+.++|..++.+.+..+|++++.||||+|.|+.+++|++|.++|++
T Consensus 336 ~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~ 397 (403)
T 3cog_A 336 FTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA 397 (403)
T ss_dssp SEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred ceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 88899999999999999999999999889999999899999999999999999999999975
No 8
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=100.00 E-value=1.5e-47 Score=365.59 Aligned_cols=331 Identities=38% Similarity=0.641 Sum_probs=295.7
Q ss_pred CCCccceeeccCCCCCCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcC
Q 019543 6 EPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (339)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~ 77 (339)
+.+++|+++|++ ..+.++++.+|||+++||.+++.+ ...+|.|+|..+|..++||+++++++|.+++++++
T Consensus 3 ~~~~~t~~~~~~-~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~i~~~ 81 (389)
T 3acz_A 3 AQDITTTLLHPK-GDHVLHSHAYPIFQTSTFCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIEGAAGSAAFG 81 (389)
T ss_dssp CCCHHHHHHSCS-SCCSTTBSSCCBCCCSBBCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CCCcceeEEecC-CCCCCCCCCCCcccCCceecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHhCCCeEEEeC
Confidence 356889999998 444589999999999999998753 23578999999999999999999999999999999
Q ss_pred cHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHH----H-----------------------------------------
Q 019543 78 SGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLL----S----------------------------------------- 111 (339)
Q Consensus 78 sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~----~----------------------------------------- 111 (339)
||++|+.+++ .++++||+|+++++.|+++...+ +
T Consensus 82 sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~ 161 (389)
T 3acz_A 82 SGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPNTKMVYLESPANPTCKVS 161 (389)
T ss_dssp SHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTTEEEEEEESSCTTTCCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCeec
Confidence 9999998655 47899999999999999865542 2
Q ss_pred --HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCC
Q 019543 112 --RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 189 (339)
Q Consensus 112 --~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~ 189 (339)
++|.++|++||+++|+|++|+.+....++..++|++++|+||+++++++++||+++++++++++.++.....+|..++
T Consensus 162 ~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~ 241 (389)
T 3acz_A 162 DIKGIAVVCHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMA 241 (389)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCC
T ss_pred CHHHHHHHHHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999887767777889999999999999998877789998863678888777766788889
Q ss_pred hHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHH
Q 019543 190 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 269 (339)
Q Consensus 190 ~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~ 269 (339)
|..+++++++++.+..|++++.++++.++++|++++.++.+.+|.++++|+++++.++.++.+++++|.+.+.+...+++
T Consensus 242 ~~~~~~~~~~l~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~l 321 (389)
T 3acz_A 242 PMDAFLCARGMKTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKSFEAAKKLM 321 (389)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSHHHHHHHH
T ss_pred HHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998887888999999996666778899
Q ss_pred ccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 270 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 270 ~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
+.++.+...+|+|+.+|++.+|+.++|..++.+.+...|++++.||+|+|.|+.+++|++|.++|+++
T Consensus 322 ~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al~~~ 389 (389)
T 3acz_A 322 EHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQALELW 389 (389)
T ss_dssp TTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHTCC
T ss_pred HhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 99988889999999999999999999999999999999999999999999999999999999999864
No 9
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=2.2e-46 Score=358.06 Aligned_cols=334 Identities=42% Similarity=0.706 Sum_probs=291.6
Q ss_pred CCCCCccceeeccCCCCCCCCCccccccccceeeCCCCCCC-CCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHH
Q 019543 4 EEEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATEN-GPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAA 82 (339)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~-~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A 82 (339)
.+..+++|+++|.+...+.++++.+|||+++||.+++..+. ..|.|+|..++..++||+++|+++|.+++++|+||++|
T Consensus 3 ~~~~~~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~la~~~g~~~~i~~~sGt~a 82 (393)
T 1n8p_A 3 QESDKFATKAIHAGEHVDVHGSVIEPISLSTTFKQSSPANPIGTYEYSRSQNPNRENLERAVAALENAQYGLAFSSGSAT 82 (393)
T ss_dssp CSSCCHHHHHHHTTCCCCSSCCSSCCBCCCSBCCBSSSSSBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEESCHHHH
T ss_pred CCCCCccceEEecCCCccCCCCcCCCcccccceeeccccccccCcceecCCChhHHHHHHHHHHHhCCCcEEEECChHHH
Confidence 34567899999998755568999999999999999876543 57899999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCccchHHHH---------------------H-------------------------HHHHH
Q 019543 83 LAAVTHLLGTGEEIVAGDDLYGGTDRLL---------------------S-------------------------RKIAE 116 (339)
Q Consensus 83 ~~~il~ll~~GD~Vi~~~~~y~~~~~~~---------------------~-------------------------~~I~~ 116 (339)
+.+++.++++||+|+++++.|+++...+ + ++|.+
T Consensus 83 ~~~al~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~ 162 (393)
T 1n8p_A 83 TATILQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLLNDLPQLIKENTKLVWIETPTNPTLKVTDIQKVAD 162 (393)
T ss_dssp HHHHHHTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHHHHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHH
T ss_pred HHHHHHHcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCChHHHHHhcccCceEEEEECCCCCcceecCHHHHHH
Confidence 9854448899999999999887544321 1 99999
Q ss_pred HHHHc----CCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHH
Q 019543 117 MAHAH----GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 192 (339)
Q Consensus 117 la~~~----g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~ 192 (339)
+|++| |+++++|++|+.+...++...++|++++|+||+++++|.++||+++++++++++.++..+..+|..+++..
T Consensus 163 la~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~ 242 (393)
T 1n8p_A 163 LIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFD 242 (393)
T ss_dssp HHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHH
T ss_pred HHHHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHH
Confidence 99999 99999999998776556667789999999999999888778899998656788888877666788888988
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCC-ceEEecCCCCCCCchHhHhhhcCC-C-cceEEEeeC-CHHHHHHH
Q 019543 193 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR-VKKVNYAGLPEHPGHELHYSQAKG-A-GSVLSFLTG-SLALSKHV 268 (339)
Q Consensus 193 a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~-i~~v~~p~~~~~~~~~~~~~~~~~-~-~~ivs~~~~-~~~~~~~~ 268 (339)
++++..+++.+..++++..++++.+.++|++++. +..+.+|+++++|+++++.++.++ . +++++|.++ +...+.+|
T Consensus 243 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~ 322 (393)
T 1n8p_A 243 AWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKF 322 (393)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHH
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHH
Confidence 8888888999999999999999999999999988 888889999989999998887665 6 899999995 45678889
Q ss_pred HccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 269 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 269 ~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
++.|+.+++++|+|+..++..+|+.+.|..++.+.+..+|++++.||||+|.|+++++|+++.+||+++
T Consensus 323 l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 323 ASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp HHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999888888899999999999999999999999999999863
No 10
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=2.7e-46 Score=360.61 Aligned_cols=328 Identities=33% Similarity=0.509 Sum_probs=284.3
Q ss_pred CccceeeccCCCCC-CCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCc
Q 019543 8 GVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (339)
Q Consensus 8 ~~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~s 78 (339)
+++|+++|++...+ .++++.+|||+|+||.+++.+ ...+|.|+|..+|..++||+++++++|.+++++++|
T Consensus 2 ~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~v~~~s 81 (421)
T 2ctz_A 2 RFETLQLHAGYEPEPTTLSRQVPIYPTTSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGKAALATAS 81 (421)
T ss_dssp CHHHHHHHTTCCCCTTTCBSSCCBCCCSCBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCSEEEEESS
T ss_pred CcceeeeeCCCCCCcCCCCccCCeeccceeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHhCCCceEEecC
Confidence 46799999987654 489999999999999998753 234688999999999999999999999999999999
Q ss_pred HHHHHHHHH-HhcCCCCEEEEcCCCccchHHHH----H------------------------------------------
Q 019543 79 GMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLL----S------------------------------------------ 111 (339)
Q Consensus 79 G~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~----~------------------------------------------ 111 (339)
|++|+..++ .++++||+|+++.+.|+++...+ .
T Consensus 82 Gt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~n~~G~~~ 161 (421)
T 2ctz_A 82 GHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIP 161 (421)
T ss_dssp HHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccCCeEEEEECCCCCCCccc
Confidence 999998544 57899999999999987654322 1
Q ss_pred --HHHHHHHHHcCCEEEEeCCc-CCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcC-hhH----HHHHH-----
Q 019543 112 --RKIAEMAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKG-ERL----AKELY----- 178 (339)
Q Consensus 112 --~~I~~la~~~g~~livD~a~-a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~-~~l----~~~l~----- 178 (339)
++|.++|++||+++|+|++| +.|...+++..++|++++|++|+++++++.+||+++.++ .++ .+.++
T Consensus 162 ~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g 241 (421)
T 2ctz_A 162 DLEALAQAAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPG 241 (421)
T ss_dssp CHHHHHHHHHHHTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGG
T ss_pred CHHHHHHHHHHcCCEEEEECCcccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccch
Confidence 99999999999999999999 888766777778999999999999998877888888732 111 11111
Q ss_pred -----------------H----HHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCC
Q 019543 179 -----------------F----LQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 237 (339)
Q Consensus 179 -----------------~----~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~ 237 (339)
. ..+.+|..++|+.++++..+++.+..|++++.++++++.++|+++|+|+.+.||++++
T Consensus 242 ~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~ 321 (421)
T 2ctz_A 242 YHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPH 321 (421)
T ss_dssp GTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTT
T ss_pred hhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCC
Confidence 1 1234678899999999999999999999999999999999999999999999999999
Q ss_pred CCchHhHhhhc-CCCcceEEEeeCC-HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEE
Q 019543 238 HPGHELHYSQA-KGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVR 315 (339)
Q Consensus 238 ~~~~~~~~~~~-~~~~~ivs~~~~~-~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lR 315 (339)
+|+|+++++++ ++.+++++|.+.+ .+.+.+|+++++.+++++++|+.++++.+|+.++|..++++.++.+|+.+++||
T Consensus 322 ~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vR 401 (421)
T 2ctz_A 322 HPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVR 401 (421)
T ss_dssp CTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEE
T ss_pred CCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEE
Confidence 99999999887 6889999999966 366788999999999999999999999999999999999988999999999999
Q ss_pred EEeccCCHHHHHHHHHHHHh
Q 019543 316 ISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 316 isvg~e~~~~li~~l~~al~ 335 (339)
+|+|.|+++++|++|.+||+
T Consensus 402 lS~g~e~~~~li~~l~~al~ 421 (421)
T 2ctz_A 402 LSVGLEHVEDLKAELKEALA 421 (421)
T ss_dssp EECCSSCHHHHHHHHHHHTC
T ss_pred EEeCCCCHHHHHHHHHHHhC
Confidence 99999999999999999984
No 11
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=100.00 E-value=3.2e-44 Score=344.92 Aligned_cols=329 Identities=33% Similarity=0.533 Sum_probs=284.3
Q ss_pred CccceeeccCCCCCCCCCccccccccceeeCCCCC-------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHH
Q 019543 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT-------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGM 80 (339)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~-------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~ 80 (339)
+++|+++|++...+.++++.+|||++++|.+++.+ ...+|.|+|..++..+++|+++++++|.+++++++||+
T Consensus 2 ~~~t~~~~~~~~~~~~~~~~~pi~~s~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~~~~~~gt 81 (412)
T 2cb1_A 2 EYTTLAVLAGLPEDPHGAVGLPIYAVAAYGFKTLEEGQERFATGEGYVYARQKDPTAKALEERLKALEGALEAVVLASGQ 81 (412)
T ss_dssp CHHHHHHHTTCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHHHCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHH
T ss_pred CccceeeecCCCcCCCCCcCCCccccceeecCChHHHHHHhccccCcCcCCCCChHHHHHHHHHHHHhCCCcEEEECCHH
Confidence 46799999987555689999999999999998764 13568999999999999999999999999999999999
Q ss_pred HHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------------------------------------------HH
Q 019543 81 AALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS----------------------------------------------RK 113 (339)
Q Consensus 81 ~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~----------------------------------------------~~ 113 (339)
+|+..++ .++++||+|+++++.|+++...+. ++
T Consensus 82 ~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~ 161 (412)
T 2cb1_A 82 AATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPEPEAVREALSAKTRAVFVETVANPALLVPDLEA 161 (412)
T ss_dssp HHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCHHHHHHHhccCCeEEEEeCCCCCCcccccHHH
Confidence 9998655 478999999999999987554321 99
Q ss_pred HHHHHHHcCCEEEEeCCcCCC-CCcCcccCCCeEEEeccccccccCCCceEEEEEEcCh---------------------
Q 019543 114 IAEMAHAHGALLLVDNSIMSP-VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------------- 171 (339)
Q Consensus 114 I~~la~~~g~~livD~a~a~g-~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~--------------------- 171 (339)
|.++|++||+++++|++|+.+ ....+...+.|++++|+||+++++++.+||+++.+++
T Consensus 162 i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (412)
T 2cb1_A 162 LATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWE 241 (412)
T ss_dssp HHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HH
T ss_pred HHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhh
Confidence 999999999999999999887 5556666789999999999999988778888887643
Q ss_pred -----hHHHHHHHHH-HhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHh
Q 019543 172 -----RLAKELYFLQ-NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 245 (339)
Q Consensus 172 -----~l~~~l~~~~-~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~ 245 (339)
++.+.++... +..|..++|..++++..+++.+..+.++..++++++.++|+++++|..+++|+.+++|+|++++
T Consensus 242 ~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~ 321 (412)
T 2cb1_A 242 ALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNAR 321 (412)
T ss_dssp HHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHH
Confidence 3344444433 3356677899888888899999989998899999999999999999989999999999999999
Q ss_pred hhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHH
Q 019543 246 SQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVND 325 (339)
Q Consensus 246 ~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~ 325 (339)
+++++.+++++|.+++.+...++++++..+. ..|+|+.++++.+|+.++|..++.+.+..+|+.++.||+|+|.+++++
T Consensus 322 ~~~~~~~~iv~~~~~~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~ 400 (412)
T 2cb1_A 322 KYLASGGPILTLDLGDLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLD 400 (412)
T ss_dssp HHCSSSCSEEEEECSSHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHH
T ss_pred HhCCCCceEEEEEeCCHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHH
Confidence 9998889999999965667788888888887 889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC
Q 019543 326 LISDLDKALRTG 337 (339)
Q Consensus 326 li~~l~~al~~~ 337 (339)
+|++|.+||+++
T Consensus 401 ~i~~l~~al~~~ 412 (412)
T 2cb1_A 401 LLALFEEALEAV 412 (412)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHhhC
Confidence 999999999863
No 12
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=100.00 E-value=3.3e-44 Score=343.26 Aligned_cols=332 Identities=37% Similarity=0.614 Sum_probs=266.7
Q ss_pred CCCCccceeeccCCCCC-CCCCccccccccceeeCCCCCC--------CCCCcccCCCCchHHHHHHHHHhHhCCCeEEE
Q 019543 5 EEPGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKADRALC 75 (339)
Q Consensus 5 ~~~~~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~~~~~~--------~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~ 75 (339)
+.++++|+++|++...+ .++++.+|+|+++|+.+++..+ ..+|.|+|..+|..+++|+++++++|.+++++
T Consensus 6 ~~~~~~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~~~~i~ 85 (398)
T 1gc0_A 6 KLPGFATRAIHHGYDPQDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLA 85 (398)
T ss_dssp -CCCHHHHHHHTTCCGGGGTTBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCCcCceeEeCCCCCCCCCCCcCCCccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCCCcEEE
Confidence 45678999999987644 4899999999999999987542 24588999999999999999999999999999
Q ss_pred cCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHH----H---------------------------------------
Q 019543 76 FTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLL----S--------------------------------------- 111 (339)
Q Consensus 76 ~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~----~--------------------------------------- 111 (339)
++||++|+.++ ..++++||+|+++++.|+++...+ .
T Consensus 86 ~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~ 165 (398)
T 1gc0_A 86 LASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMH 165 (398)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCC
T ss_pred ECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCcc
Confidence 99999999854 457899999999999998866543 1
Q ss_pred ----HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh-cCC
Q 019543 112 ----RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGS 186 (339)
Q Consensus 112 ----~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~-~~~ 186 (339)
++|.++|++||+++++|++|+.+....++..++|+++.|+||+++++++.+||+++++++.+.+.++..... ++.
T Consensus 166 ~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~ 245 (398)
T 1gc0_A 166 MADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGA 245 (398)
T ss_dssp CCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCC
T ss_pred cccHHHHHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCC
Confidence 999999999999999999998876666667789999999999999988777899988753333356655555 678
Q ss_pred CCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHH
Q 019543 187 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALS 265 (339)
Q Consensus 187 ~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~ 265 (339)
.+++..++++..+++.+..++++..++++++.++|++++.++.+.+|.++++|+++++.++.++.+++++|.+.+ .+.+
T Consensus 246 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (398)
T 1gc0_A 246 VLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAG 325 (398)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHHHHH
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCCHHHH
Confidence 889998888888899999999999999999999999999999999999999999999887777789999999864 3567
Q ss_pred HHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 266 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 266 ~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.+++++++.++..+++|+.++++.+|..++|..++.+.+..+|++++.||||+|.++++++|++|.++|++
T Consensus 326 ~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 326 RRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp HHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 88999999989999999999999999999999999988999999999999999999999999999999976
No 13
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=8.1e-42 Score=332.95 Aligned_cols=334 Identities=86% Similarity=1.294 Sum_probs=288.7
Q ss_pred CCCccceeeccCCCCCCCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH
Q 019543 6 EPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA 85 (339)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~ 85 (339)
.+.++|.++|.+...++.+++++||++++++.++...+...|.|+|.++|.++++++++++++|.+++++++||++|+.+
T Consensus 84 ~~~~~~~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~~~g~~~~~~l~~~la~~~g~~~~i~~~sGt~al~~ 163 (464)
T 1ibj_A 84 EASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSA 163 (464)
T ss_dssp -CCHHHHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH
T ss_pred cCCcCCeEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCccccCCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHH
Confidence 35667878888653356889999999999998766555566889998999999999999999999999999999999987
Q ss_pred HHHhcCCCCEEEEcCCCccchHHHHH-----------------------------------------------HHHHHHH
Q 019543 86 VTHLLGTGEEIVAGDDLYGGTDRLLS-----------------------------------------------RKIAEMA 118 (339)
Q Consensus 86 il~ll~~GD~Vi~~~~~y~~~~~~~~-----------------------------------------------~~I~~la 118 (339)
++.+++|||+|+++++.|+++...+. ++|+++|
T Consensus 164 ~l~~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la 243 (464)
T 1ibj_A 164 VTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMA 243 (464)
T ss_dssp HHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred HHHHhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHH
Confidence 66788999999999999988764321 9999999
Q ss_pred HHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHh
Q 019543 119 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 198 (339)
Q Consensus 119 ~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~ 198 (339)
++||+++|+|++|+.|....++..++|++++|+||+++|+++.++|+++++++++.+.++......|..++++.++++..
T Consensus 244 ~~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~ 323 (464)
T 1ibj_A 244 HAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLR 323 (464)
T ss_dssp HTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHH
T ss_pred HHcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 99999999999999886656666789999999999999887778899999866788888777666788889998888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceee
Q 019543 199 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSIT 278 (339)
Q Consensus 199 ~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~ 278 (339)
+++.+..|+++..+++..+.++++.++.++.+.++.+..+|++++...+.++.+++++|.+++.+...+|++.|+.++++
T Consensus 324 al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~L~~~gi~ 403 (464)
T 1ibj_A 324 GIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIA 403 (464)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEEC
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECCHHHHHHHHHhcCcceEe
Confidence 89999889999999999999999999988899999999888888887766678899999997655566799999999999
Q ss_pred cccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcCCC
Q 019543 279 VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGPL 339 (339)
Q Consensus 279 v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~~~ 339 (339)
++.|..++++++|+.+.|..++.+.+...|+.++.||||+|.|+.++++++|.++|+++|.
T Consensus 404 v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~edi~~li~~L~~al~~~~~ 464 (464)
T 1ibj_A 404 VSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTFPL 464 (464)
T ss_dssp SCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCSSCHHHHHHHHHHHHHSCCC
T ss_pred ecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHhhcCC
Confidence 9999999999999888888777666667788889999999999999999999999999884
No 14
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=2e-41 Score=324.84 Aligned_cols=329 Identities=37% Similarity=0.659 Sum_probs=284.4
Q ss_pred CCccceeeccCCCCCCCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCc
Q 019543 7 PGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (339)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~s 78 (339)
.+++|+++|++.....++++.+|+|+++++.++... ....|.|+|.++|..++||+++++++|.+++++++|
T Consensus 6 ~~~~t~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~~~i~~~~ 85 (404)
T 1e5e_A 6 MTPATACIHANPQKDQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVATSS 85 (404)
T ss_dssp CCHHHHHHHSSCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEESS
T ss_pred CCccceeeecCCCCCCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCCcEEEeCC
Confidence 457899999986523479999999999999998653 134688999889999999999999999999999999
Q ss_pred HHHHHHHHH-HhcCCCCEEEEcCCCccchHH----HHH------------------------------------------
Q 019543 79 GMAALAAVT-HLLGTGEEIVAGDDLYGGTDR----LLS------------------------------------------ 111 (339)
Q Consensus 79 G~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~----~~~------------------------------------------ 111 (339)
|++|+..++ ++++|||+|+++++.|+++.. .+.
T Consensus 86 g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~t~~v~l~~p~NptG~v~~ 165 (404)
T 1e5e_A 86 GMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFETPANPTLKIID 165 (404)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred hHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCcEEEEECCCCCCCcccC
Confidence 999998644 588999999999999988766 332
Q ss_pred -HHHHHHHHH-cCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHH-HHHHHHHhc-CCC
Q 019543 112 -RKIAEMAHA-HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK-ELYFLQNAE-GSG 187 (339)
Q Consensus 112 -~~I~~la~~-~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~-~l~~~~~~~-~~~ 187 (339)
++|+++|++ ||+++|+|++|+.+....++..+.|++++|+||+++++++.++|++++++ ++++ .++.....+ +..
T Consensus 166 l~~i~~la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~-~~~~~~l~~~~~~~~g~~ 244 (404)
T 1e5e_A 166 MERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKA-DLLQQIRMVGIKDITGSV 244 (404)
T ss_dssp HHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECH-HHHHHHHHTCCCCCCCCC
T ss_pred HHHHHHHHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccccCCCCCCeEEEEEECH-HHHHHHHHHHHHhCCCCC
Confidence 999999999 99999999999988765666678999999999999998877678998875 4555 565544334 667
Q ss_pred CChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHH
Q 019543 188 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSK 266 (339)
Q Consensus 188 ~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~ 266 (339)
++++.++++..+++.++.+++++.++++.+.+++++++.+..+.+|.+++.|++++...+.++.+++++|.+.+. +.+.
T Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 324 (404)
T 1e5e_A 245 ISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGAK 324 (404)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHHHH
T ss_pred CCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCCHHHHH
Confidence 889888888888999888999999999999999999998988999999999999988887778899999998664 5577
Q ss_pred HHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 267 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 267 ~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+++++++.+..++++|+.+|++.+|+.++|..++.+.+...|++++.||||+|.|+.++++++|.+++++
T Consensus 325 ~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~e~~~~li~~l~~al~~ 394 (404)
T 1e5e_A 325 KLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGIEDADELIADFKQGLDA 394 (404)
T ss_dssp HHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 8888888888899999999999999999999999999999999889999999999999999999999875
No 15
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=6.1e-40 Score=313.45 Aligned_cols=336 Identities=40% Similarity=0.685 Sum_probs=287.4
Q ss_pred CCCCCCCCccceeeccCCCCC-CCCCccccccccceeeCCCCC--------CCCCCcccCCCCchHHHHHHHHHhHhCCC
Q 019543 1 MSVEEEPGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKAD 71 (339)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~~~~~--------~~~~~~y~r~~~~~~~~le~~la~~~g~~ 71 (339)
|+--..++++|+++|++...+ ...++..|++.++++..+... ....|.|+|..++..+++++++++++|.+
T Consensus 1 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~ 80 (398)
T 2rfv_A 1 MSDCRTYGFNTQIVHAGQQPDPSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGE 80 (398)
T ss_dssp -CCGGGSCHHHHHHHTTCCCCTTTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCS
T ss_pred CCCcccCCCceeEeecCCcCccCCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCC
Confidence 444455678899999987644 478999999999999987643 13568899999999999999999999999
Q ss_pred eEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHH----H-----------------------------------
Q 019543 72 RALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLL----S----------------------------------- 111 (339)
Q Consensus 72 ~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~----~----------------------------------- 111 (339)
++++++||++|+..+ ..+++|||+|+++++.|+++...+ .
T Consensus 81 ~~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~n 160 (398)
T 2rfv_A 81 AGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYIETPAN 160 (398)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSBT
T ss_pred cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCCCeEEEEECCCC
Confidence 999999999999854 457899999999999998765543 2
Q ss_pred --------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHH-HHHHHHH
Q 019543 112 --------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK-ELYFLQN 182 (339)
Q Consensus 112 --------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~-~l~~~~~ 182 (339)
++|.++|++||+++|+|++|+.+....+...+.|+++.|+||+++++++.+||++++++ ++++ .++....
T Consensus 161 ptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~-~~~~~~~~~~~~ 239 (398)
T 2rfv_A 161 PTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQ-EFIDQARFVGLK 239 (398)
T ss_dssp TTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECH-HHHHHHHHTHHH
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECH-HHHHHHHHHHHH
Confidence 99999999999999999999988776666678999999999999988877778998875 5555 5665555
Q ss_pred hc-CCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC
Q 019543 183 AE-GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 261 (339)
Q Consensus 183 ~~-~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~ 261 (339)
.+ +..+++..++++..+++.+..++++..++++.+.++|++++.++.+.+|.++..|++++...+.++.+++++|.+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~ 319 (398)
T 2rfv_A 240 DITGGCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG 319 (398)
T ss_dssp HTTCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred hCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 56 77888988888888888888899999999999999999999999999999998888888876666789999999865
Q ss_pred -HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 262 -LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 262 -~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
.+.+.++.+.++..++++++|..++++.+|...+|..++.+.+...|+.++.||||+|.++++++|++|.++|+++
T Consensus 320 ~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 320 GLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp HHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 3567789999998999999999999999999999998888888889988999999999999999999999999863
No 16
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=1.2e-39 Score=310.04 Aligned_cols=327 Identities=39% Similarity=0.621 Sum_probs=275.4
Q ss_pred CccceeeccCCCC-CCCCCccccccccceeeCCCCCCCCCCcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH
Q 019543 8 GVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAV 86 (339)
Q Consensus 8 ~~~~~~~~~~~~~-~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i 86 (339)
+++|+++|.+... +.++++.+|||++++|.+++.....+|.|+|..++..++|+++++++++.++.++++||++|+..+
T Consensus 4 ~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~ 83 (386)
T 1cs1_A 4 KQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLV 83 (386)
T ss_dssp CHHHHHHHTTTTCCTTTCBSSCCBCCCSBBCCSBTTBCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHH
T ss_pred CcceeEEecCCCccccCCCCCCCccccceeeccccCCCCCcceeCCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHH
Confidence 5679999998654 458999999999999999776655679999999999999999999999998999999999999865
Q ss_pred H-HhcCCCCEEEEcCCCccchHHHH----H-------------------------------------------HHHHHHH
Q 019543 87 T-HLLGTGEEIVAGDDLYGGTDRLL----S-------------------------------------------RKIAEMA 118 (339)
Q Consensus 87 l-~ll~~GD~Vi~~~~~y~~~~~~~----~-------------------------------------------~~I~~la 118 (339)
+ .++++||+|+++++.|+++...+ . ++|.++|
T Consensus 84 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~ 163 (386)
T 1cs1_A 84 TTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLA 163 (386)
T ss_dssp HHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHH
T ss_pred HHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHH
Confidence 4 47899999999999998754432 1 9999999
Q ss_pred HHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHh
Q 019543 119 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 198 (339)
Q Consensus 119 ~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~ 198 (339)
++||+++|+|++|+.+....+...+.|++++|++|++++++.++||+++++++++.+.++.....++...++..++.+..
T Consensus 164 ~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 243 (386)
T 1cs1_A 164 REVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLR 243 (386)
T ss_dssp HHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHH
T ss_pred HHcCCEEEEECCCcccccCCccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 99999999999998876655566788999999999999887666789988865677888776666667778888877777
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCCccee
Q 019543 199 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSI 277 (339)
Q Consensus 199 ~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~~~~i 277 (339)
.++.+..+.++..++++.+.++|++++.+..+.+|.+...|++++...+.++.+++++|.+.+ .+...++++ ..|+
T Consensus 244 ~l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~gi 320 (386)
T 1cs1_A 244 GLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLG---GLSL 320 (386)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHHHHHH---TCSS
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCCHHHHHHHHH---hCCc
Confidence 788888888899999999999999999998888999988888888877666789999999854 333344443 3455
Q ss_pred ecc---cCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 278 TVS---FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 278 ~v~---~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
.++ +|+..|++++|..+.|...+.+.+..+|+.++.||||++.+++++++++|.++|+++
T Consensus 321 ~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 321 FTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp SEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 555 899999999999989988888788888988899999999999999999999999763
No 17
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=100.00 E-value=1.2e-32 Score=255.98 Aligned_cols=280 Identities=43% Similarity=0.701 Sum_probs=232.2
Q ss_pred HHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHH----H---------------------
Q 019543 58 DALESLLAKLDKADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLL----S--------------------- 111 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~----~--------------------- 111 (339)
++||+++++++|.+++++++||++|+..++ .++++||+|+++++.|++....+ .
T Consensus 1 ~~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i 80 (331)
T 1pff_A 1 SALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHL 80 (331)
T ss_dssp CHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTC
T ss_pred ChHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhh
Confidence 368999999999999999999999998654 47899999999999998765433 1
Q ss_pred ----------------------HHHHHHHHH-cCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCceEEEEEE
Q 019543 112 ----------------------RKIAEMAHA-HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAV 168 (339)
Q Consensus 112 ----------------------~~I~~la~~-~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~ 168 (339)
++|.++|++ ||+++++|++|+.|....+...+.|++++|+||++++++..++|++++
T Consensus 81 ~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~~~~~r~~G~~~~ 160 (331)
T 1pff_A 81 KPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGHTDVVAGLVCS 160 (331)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSSSSCCCEEEEE
T ss_pred cCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccCCCCCceEEEEEe
Confidence 999999999 999999999998776544556688999999999999887655789988
Q ss_pred cChhHHHHHHHHHHh-cCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhh
Q 019543 169 KGERLAKELYFLQNA-EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 247 (339)
Q Consensus 169 ~~~~l~~~l~~~~~~-~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~ 247 (339)
+++++.+.++..... .+...++..++.+..+++.++.+.++..++.+.+.++++.++.+..+.++.+...|++.+....
T Consensus 161 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~ 240 (331)
T 1pff_A 161 RADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQ 240 (331)
T ss_dssp CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhh
Confidence 753677776655444 4567788877777778888888888889999999999998888888889988888888777665
Q ss_pred cCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHH
Q 019543 248 AKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLI 327 (339)
Q Consensus 248 ~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li 327 (339)
.++.+++++|.+.+.+...++++....+...+++|+.+|++.+|....|..++.+.+..+|++++.||||+|.+++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i 320 (331)
T 1pff_A 241 MKMFGSMIAFDVDGLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDII 320 (331)
T ss_dssp CSSCCSEEEEECSSHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHH
T ss_pred CCCCceEEEEEECCHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHH
Confidence 56678999999876555666665544444477899999999999988999888888888999889999999999999999
Q ss_pred HHHHHHHhcC
Q 019543 328 SDLDKALRTG 337 (339)
Q Consensus 328 ~~l~~al~~~ 337 (339)
+++.++|+++
T Consensus 321 ~~l~~~l~~~ 330 (331)
T 1pff_A 321 DDLKQALDLV 330 (331)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHh
Confidence 9999999863
No 18
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.95 E-value=1.8e-27 Score=229.01 Aligned_cols=275 Identities=17% Similarity=0.177 Sum_probs=203.8
Q ss_pred CCCcccCCCCchHHHHHHHHHhHhCCCeEEE---cCcHHHHHHH-HHHhcCCCCEEEEcC-CCccchHHHH--------H
Q 019543 45 GPYDYTRSGNPTRDALESLLAKLDKADRALC---FTSGMAALAA-VTHLLGTGEEIVAGD-DLYGGTDRLL--------S 111 (339)
Q Consensus 45 ~~~~y~r~~~~~~~~le~~la~~~g~~~~l~---~~sG~~A~~~-il~ll~~GD~Vi~~~-~~y~~~~~~~--------~ 111 (339)
.+|.|+|. .+++||+++|+++|++.+++ |+||++|+.+ +.++++|||+|++++ +.|++...++ .
T Consensus 66 ~gy~y~~~---~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~ 142 (427)
T 3i16_A 66 SGYGYGDI---GRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMG 142 (427)
T ss_dssp CTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSC
T ss_pred CCCCCCHH---HHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHH
Confidence 45777765 49999999999999999999 8999999985 456899999999998 8887654322 0
Q ss_pred ---------------------------------------------------------HHHHHHHHH--cCCEEEEeCCcC
Q 019543 112 ---------------------------------------------------------RKIAEMAHA--HGALLLVDNSIM 132 (339)
Q Consensus 112 ---------------------------------------------------------~~I~~la~~--~g~~livD~a~a 132 (339)
++|+++|++ ||+++++|++|+
T Consensus 143 ~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~ 222 (427)
T 3i16_A 143 SLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYG 222 (427)
T ss_dssp CTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTT
T ss_pred HHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence 899999999 999999999999
Q ss_pred CCC-CcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCCh-HH-HHHHHhchhhHHHHH
Q 019543 133 SPV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAP-FD-CWICLRGVKTMALRV 207 (339)
Q Consensus 133 ~g~-~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~-~~-a~~~~~~l~~~~~r~ 207 (339)
.++ ..++...++|++++|+||+++|+++..||+++++ ++++++++.... .++..++| +. ++++++++++++.|+
T Consensus 223 ~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~~~r~ 301 (427)
T 3i16_A 223 EFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGT-KDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLAPHIS 301 (427)
T ss_dssp TTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHH
T ss_pred cccccCCccccCCeEEEecCcccCCCCCCceEEEEEEC-HHHHHHHHHhcccCccCccCCccHHHHHHHHHHHHHHHHHH
Confidence 887 5677778899999999999999887889999987 478888876432 23333444 44 788899999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccc
Q 019543 208 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSL 287 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~ 287 (339)
+++.+|+.+++++|++++. .| +|+ +++|+|++ |++|.+++.+.+.+|++.|+.+....++-...+.
T Consensus 302 ~~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~~~----------i~~i~l~~~~~~~~f~~~l~~~~~~~s~~~p~~~ 367 (427)
T 3i16_A 302 MEALKGAILCSRIMELAGF--EV-MPK-YDEKRSDI----------IQSIKFNDKDKLIEFCKGIQTGSPIDSFVSCEPW 367 (427)
T ss_dssp HHHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCSSS----------CEEEECSSHHHHHHHHHHHHHTCSSSTTSCCCCB
T ss_pred HHHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCccE----------EEEEEECCHHHHHHHHHHHhhcCcccccccCcCC
Confidence 9999999999999999975 56 787 66665533 9999999999999999999887665443211110
Q ss_pred ee----ccccccCCCC----CHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 288 IS----MPCFMSHASI----PVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 288 ~~----~p~~~~h~~~----~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
.. .+..|+-..+ +-|..+...+.+..+...-|-.+.+...-.+..|+.++
T Consensus 368 ~~~gy~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
T 3i16_A 368 DMPGYTDQVIMAAGAFIQGSSIELSADAPIREPYIAYLQGGLTFDHAKIGILIALSRI 425 (427)
T ss_dssp CC---CCCEEEEECCSSTTCSSSSEEEEESCTTCEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CCCCCCCceeeccCcCCCCccccccCCCCCCCCeEEEEcCCccHHHHHHHHHHHHHHH
Confidence 00 0001110000 00000111234456777777777777766777777664
No 19
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.95 E-value=4.1e-27 Score=226.40 Aligned_cols=271 Identities=17% Similarity=0.139 Sum_probs=203.0
Q ss_pred CCCcccCCCCchHHHHHHHHHhHhCCCeEEE---cCcHHHHHHH-HHHhcCCCCEEEEcC-CCccchHHHH---------
Q 019543 45 GPYDYTRSGNPTRDALESLLAKLDKADRALC---FTSGMAALAA-VTHLLGTGEEIVAGD-DLYGGTDRLL--------- 110 (339)
Q Consensus 45 ~~~~y~r~~~~~~~~le~~la~~~g~~~~l~---~~sG~~A~~~-il~ll~~GD~Vi~~~-~~y~~~~~~~--------- 110 (339)
.+|.|+|. .+++||+++|+++|++++++ |+||++||.+ +.++++|||+|++++ +.|++...++
T Consensus 67 ~gy~Y~~~---g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~ 143 (427)
T 3hvy_A 67 SGYGYNDI---GRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVG 143 (427)
T ss_dssp CTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSC
T ss_pred cCCCCCch---hHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhh
Confidence 45778765 48999999999999999999 8999999985 456899999999998 8886554221
Q ss_pred -------------------------------H------------------------HHHHHHHHH--cCCEEEEeCCcCC
Q 019543 111 -------------------------------S------------------------RKIAEMAHA--HGALLLVDNSIMS 133 (339)
Q Consensus 111 -------------------------------~------------------------~~I~~la~~--~g~~livD~a~a~ 133 (339)
. ++|+++|++ ||+++++|++|+.
T Consensus 144 ~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~ 223 (427)
T 3hvy_A 144 SLREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGE 223 (427)
T ss_dssp CTGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCT
T ss_pred HHHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccc
Confidence 0 899999999 8999999999998
Q ss_pred CC-CcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh--cCC--CCChHHHHHHHhchhhHHHHHH
Q 019543 134 PV-LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EGS--GLAPFDCWICLRGVKTMALRVE 208 (339)
Q Consensus 134 g~-~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--~~~--~~~~~~a~~~~~~l~~~~~r~~ 208 (339)
++ ..++...++|++++|+||+++|+++..||+++++ ++++++++..... .+. ..++..++++++++++++.|++
T Consensus 224 ~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~~~r~~ 302 (427)
T 3hvy_A 224 FVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGK-EEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMAPHVTI 302 (427)
T ss_dssp TTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcccCCeEEEECCcccccccccceEEEEEEC-HHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHHHHHHH
Confidence 87 5677788899999999999999887889999987 5788888775422 222 2223347788899999999999
Q ss_pred HHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeeccc-------
Q 019543 209 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSF------- 281 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~------- 281 (339)
++.+|+.+++++|++++. .| +|+ +++|.| .-+++|.+++.+++.+|++.|+.+....++
T Consensus 303 ~~~~~a~~la~~L~~~g~--~V-~p~-~~~~~~----------~li~~~~l~~~~~~~~f~~~l~~~~~~~s~~~p~~~~ 368 (427)
T 3hvy_A 303 EAVKGAVFCARIMELAGF--DV-LPK-YNDKRT----------DIIQAIKFNDEKKLIDFIKGIQTASPVDSFVQCEAWD 368 (427)
T ss_dssp HHHHHHHHHHHHHHHTTC--EE-ESC-TTSCCS----------SSEEEEECSSHHHHHHHHHHHHHTCSSSTTCCC----
T ss_pred HHHHHHHHHHHHHHhCCC--ee-cCC-CCCCCc----------eEEEEEeCCCHHHHHHHHHHhccccccccccCCCCCC
Confidence 999999999999999875 45 786 666654 239999999999999999999886554332
Q ss_pred -CCcccceecccc----ccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 282 -GSVKSLISMPCF----MSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 282 -G~~~s~~~~p~~----~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
.|+.+.+..++- .+...++ +...+.+..+...-|-.+.+...-.+..|+.++
T Consensus 369 ~~Gy~~~~~~~~~~~~~~~~~e~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
T 3hvy_A 369 MPGYEDKVIMAAGTFVQGASIELS----ADAPIREPYIGYLQGGLTFDHAKLGVLIALSKL 425 (427)
T ss_dssp ------CEEEECCCSSTTCSSSSE----EEEESCTTCEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CCCCcCceeeeccccCCCcccccc----CCCCCCCCeeEEEcCCccHHHHHHHHHHHHHHh
Confidence 222222222210 0111111 112245566788888888877777888888764
No 20
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.95 E-value=2.2e-26 Score=220.41 Aligned_cols=270 Identities=18% Similarity=0.191 Sum_probs=198.8
Q ss_pred CCCcccCCCCchHHHHHHHHHhHhCCCeEEE---cCcHHHHHHH-HHHhcCCCCEEEEcC-CCccchHHHH---------
Q 019543 45 GPYDYTRSGNPTRDALESLLAKLDKADRALC---FTSGMAALAA-VTHLLGTGEEIVAGD-DLYGGTDRLL--------- 110 (339)
Q Consensus 45 ~~~~y~r~~~~~~~~le~~la~~~g~~~~l~---~~sG~~A~~~-il~ll~~GD~Vi~~~-~~y~~~~~~~--------- 110 (339)
.+|.|+|. .+++||+++|+++|++.+++ |+||++|+.+ +.++++|||+|++++ +.|++...++
T Consensus 52 ~~~~y~~~---~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~ 128 (409)
T 3jzl_A 52 TGYGYDDE---GRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGS 128 (409)
T ss_dssp CTTCTTCH---HHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSC
T ss_pred cCCCCChh---HHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhH
Confidence 45667765 58999999999999999999 8999999985 456899999999998 8888766432
Q ss_pred -H----------------------------------------------------HHHHHHHHH--cCCEEEEeCCcCCCC
Q 019543 111 -S----------------------------------------------------RKIAEMAHA--HGALLLVDNSIMSPV 135 (339)
Q Consensus 111 -~----------------------------------------------------~~I~~la~~--~g~~livD~a~a~g~ 135 (339)
+ ++|+++|++ ||+++++|++|+.++
T Consensus 129 l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~ 208 (409)
T 3jzl_A 129 LKDFHIGYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFV 208 (409)
T ss_dssp TGGGTCEEEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTT
T ss_pred HHHcCCEEEEeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccccc
Confidence 1 899999999 999999999999887
Q ss_pred -CcCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh--cC--CCCChHHHHHHHhchhhHHHHHHHH
Q 019543 136 -LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EG--SGLAPFDCWICLRGVKTMALRVEKQ 210 (339)
Q Consensus 136 -~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--~~--~~~~~~~a~~~~~~l~~~~~r~~~~ 210 (339)
..++...++|++++|+||+++|+++..||+++++ ++++++++..... .+ ....+..++++++++++++.|++++
T Consensus 209 ~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~~~~r~~~~ 287 (409)
T 3jzl_A 209 EYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGK-EALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQA 287 (409)
T ss_dssp SSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCccccCCeEEEECccccCCccCCceEEEEEeC-HHHHHHHHHHhccccccccccccHHHHHHHHHHHhhHHHHHHHH
Confidence 4567778899999999999999887889999987 5788888775432 11 1222222456788899999999999
Q ss_pred HHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccC--------
Q 019543 211 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFG-------- 282 (339)
Q Consensus 211 ~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G-------- 282 (339)
.+|+++++++|++++. .| +|. +++|+| .-|++|.+++.+++.+|++.|+.+....++-
T Consensus 288 ~~~a~~la~~L~~~g~--~v-~p~-~~~~~~----------~~i~~i~l~~~~~~~~~~~~L~~~~~~~s~~~p~~~~~~ 353 (409)
T 3jzl_A 288 IKGARFTAAMLAEFGV--EA-DPV-WDAPRT----------DLIQSVSFHNKEKMVAFAQAIQAASPVNAHVLPIGAYMP 353 (409)
T ss_dssp HHHHHHHHHHHHHTTC--EE-ESC-TTSCCS----------SSCCEEECSCHHHHHHHHHHHHHTSSSSTTSCCCCBCCT
T ss_pred HHHHHHHHHHHHhCCC--cc-cCC-CCCCCc----------cEEEEEEeCCHHHHHHHHHHHHhcCcccccCCCCCCCCC
Confidence 9999999999999875 45 776 666544 2399999999999999999998876543331
Q ss_pred CcccceeccccccCCCC----CHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 283 SVKSLISMPCFMSHASI----PVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 283 ~~~s~~~~p~~~~h~~~----~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
++...+. |+-..+ +-|..+...+.+..+.+.-|-.+.+...-.+..|+.+
T Consensus 354 gy~~~~~----~~~~~f~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (409)
T 3jzl_A 354 GYEDDVI----MAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHIKIAVTRAIQK 407 (409)
T ss_dssp TCSSCEE----EECCCSSTTCSSSCEEEEESSTTTEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CCCCcee----EeccccCCCcceeecCCCCCCCCeEEEEcCCccHHHHHHHHHHHHHh
Confidence 1111111 111110 0011111123445677777877777766677777764
No 21
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.92 E-value=1.4e-23 Score=199.15 Aligned_cols=265 Identities=13% Similarity=0.104 Sum_probs=191.6
Q ss_pred CchHHHHHHHH-HhHhC-CCeEEEcCcHHHHHHH-HHHh-cCCCCEEEEcCCCccchHHHHH------------------
Q 019543 54 NPTRDALESLL-AKLDK-ADRALCFTSGMAALAA-VTHL-LGTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 54 ~~~~~~le~~l-a~~~g-~~~~l~~~sG~~A~~~-il~l-l~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
+|.+++||+++ |+++| .+++++++||++|+.+ +..+ ++|||+|+++++.|.++...+.
T Consensus 35 ~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~ 114 (377)
T 3ju7_A 35 GPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYM 114 (377)
T ss_dssp CHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSB
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCccCCc
Confidence 68899999999 99999 8899999999999985 4456 8999999999998876543221
Q ss_pred -------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccC---CCeEEEecc--cccc
Q 019543 112 -------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLEL---GADIVMHSA--TKFI 155 (339)
Q Consensus 112 -------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~---~~Di~~~S~--sK~l 155 (339)
++|.++|+ ||++||+|++|+.|...+.... ..|+.++|| +|++
T Consensus 115 d~~~l~~~i~~~~~~tk~v~~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l 193 (377)
T 3ju7_A 115 DKTVLWDKIEELKEEVAIVVPYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPF 193 (377)
T ss_dssp CHHHHHHHHHHHGGGEEEECCBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSS
T ss_pred CHHHHHHHHhcCCCCceEEEEECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcC
Confidence 89999999 9999999999998864332222 368888876 6999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHHHHh------------cCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q 019543 156 AGHSDVMAGVLAVKGERLAKELYFLQNA------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 156 ~g~~~~~gG~v~~~~~~l~~~l~~~~~~------------~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~ 223 (339)
++ + .||+++++++++.++++.++.. ++..++++.+++++.+++.++.+.++++++++++.+.|++
T Consensus 194 ~~-g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~~~~~~L~~ 270 (377)
T 3ju7_A 194 GI-G--EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISEWYKQLLQS 270 (377)
T ss_dssp CC-B--SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-C--CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 86 3 5899999888888888776541 2466889999999999999999999999999999999998
Q ss_pred CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccC--CCCCH
Q 019543 224 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH--ASIPV 301 (339)
Q Consensus 224 ~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h--~~~~~ 301 (339)
++++.....|....+ .....+++.+.+.....++.+.|+..||.++.+....+...|....| ..++.
T Consensus 271 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~ 339 (377)
T 3ju7_A 271 NGLMKKGWQLQKTEA-----------VIQQFMPILCPEEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTR 339 (377)
T ss_dssp TTTTTTTCBCCCCSC-----------BCCSSEEEECCTTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHH
T ss_pred CCCccccccCCCCCc-----------ceEEEEEEEeCChhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHH
Confidence 876421111210000 11223456665432356788888888999887653333333332222 12221
Q ss_pred HHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 302 EVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 302 ~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
..+ +..+.||++++..-+++.++.+.++|++.
T Consensus 340 ~~~----~~~~~l~lp~~~~~t~~di~~v~~~l~~~ 371 (377)
T 3ju7_A 340 TNK----IAKRIVSLPLWEGMTKEIVEQIVICLGQK 371 (377)
T ss_dssp HHH----HHHHEEEECCCTTCCHHHHHHHHHHHTC-
T ss_pred HHH----HHhCEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 111 23468999999998888899999988753
No 22
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.91 E-value=3.5e-23 Score=195.15 Aligned_cols=264 Identities=14% Similarity=0.135 Sum_probs=188.4
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh-cCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL-LGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l-l~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.++..+++|+++++++|.+++++++||++|+.+++ .+ +++||+|+++.+.|.++...+.
T Consensus 34 ~~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 113 (373)
T 3frk_A 34 LGDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAVSYTGAKPIFVEPDIRTYNID 113 (373)
T ss_dssp SSHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHHHHHSCEEEEECEETTTTEEC
T ss_pred CCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccccccCcC
Confidence 46789999999999999999999999999998644 56 8999999999999988765443
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCC--CeEEEeccc--cccccCCC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KFIAGHSD 160 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~--~Di~~~S~s--K~l~g~~~ 160 (339)
++|.++|++||+++|+|++|+.|...+....+ .|++++||+ |++++++
T Consensus 114 ~~~l~~~l~~~~~~v~~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~l~~~g- 192 (373)
T 3frk_A 114 PSLIESAITEKTKAIIAVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYPAKNLGSLG- 192 (373)
T ss_dssp GGGTGGGCCTTEEEEEEECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSS-
T ss_pred HHHHHHhcCCCCeEEEEECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCEeccccccEEEEeCcCCCccCccc-
Confidence 99999999999999999999987653333333 799999977 9998644
Q ss_pred ceEEEEEEcChhHHHHHHHHHHh------------cCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 161 VMAGVLAVKGERLAKELYFLQNA------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~------------~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
.||+++++++.+.+.++..+.. ++..++++.+++....++.++...++++++++++.+.|++++ +.
T Consensus 193 -~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~ 270 (373)
T 3frk_A 193 -DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-VI 270 (373)
T ss_dssp -SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-EE
T ss_pred -eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-eE
Confidence 3889998876777777765531 123467787877777777888888888899999999998876 43
Q ss_pred EEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceecccccc--C--CCCCHHHH
Q 019543 229 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS--H--ASIPVEVR 304 (339)
Q Consensus 229 ~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~--h--~~~~~~~~ 304 (339)
.|..+... .....++++...+ ..++.+.|+..||.++.+...+....|.... + ..++....
T Consensus 271 ---~~~~~~~~---------~~~~~~~~~~~~~---~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (373)
T 3frk_A 271 ---IPVEADYA---------KHVWYTFVIRSEK---RDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEK 335 (373)
T ss_dssp ---CCCCCTTE---------ECCCSSEEEEESS---HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHH
T ss_pred ---eccCCCCC---------ceeeEEEEEEeCC---HHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHH
Confidence 23211100 1122345555443 3466777777788888654222222222110 0 01111000
Q ss_pred HhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcCC
Q 019543 305 QARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 338 (339)
Q Consensus 305 ~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~~ 338 (339)
+..+.||+|++...+++.++.+.++|++.+
T Consensus 336 ----~~~~~lrl~~~~~~t~~di~~~~~~l~~~~ 365 (373)
T 3frk_A 336 ----IANEILSIPIWYGMKNEEIEYVIDKINAWK 365 (373)
T ss_dssp ----HHHHEEEECCCTTCCHHHHHHHHHHHHTCC
T ss_pred ----HHhCEEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 123689999999999999999999998764
No 23
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.91 E-value=1.3e-22 Score=191.11 Aligned_cols=263 Identities=16% Similarity=0.131 Sum_probs=190.9
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh-cCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL-LGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l-l~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.++..+++|+++++++|.+++++++||++|+.+++ .+ ++|||+|+++.+.|.++...+.
T Consensus 33 ~~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d 112 (367)
T 3nyt_A 33 LGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLD 112 (367)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBC
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCccCCcC
Confidence 56789999999999999999999999999998644 56 7999999999999988765443
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCC--eEEEecc--ccccccCCC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGA--DIVMHSA--TKFIAGHSD 160 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~--Di~~~S~--sK~l~g~~~ 160 (339)
++|.++|++||+++|+|++|+.|...+....+. |++++|| +|++++.|.
T Consensus 113 ~~~l~~~i~~~~~~v~~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~K~l~~~g~ 192 (367)
T 3nyt_A 113 PQLLEAAITPRTKAIIPVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSAPLGCYGD 192 (367)
T ss_dssp GGGTGGGCCTTEEEECCBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTTSSSCCSSC
T ss_pred HHHHHHhcCcCCcEEEeeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccCCCCEEEEECCCCCcCCCcCc
Confidence 999999999999999999998876533322233 9999997 899986543
Q ss_pred ceEEEEEEcChhHHHHHHHHHHh------------cCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 161 VMAGVLAVKGERLAKELYFLQNA------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~------------~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
||+++++++++.+.++..+.. ++..+++..++++...++.++...++++++++++.+.|++.+ +.
T Consensus 193 --gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~-~~ 269 (367)
T 3nyt_A 193 --GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLSLKQVG-IG 269 (367)
T ss_dssp --CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTT-CC
T ss_pred --eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-ee
Confidence 889998877787777765431 246688888888888888888888888999999999998874 22
Q ss_pred EEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccc-cCCCCCHHHHHhC
Q 019543 229 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM-SHASIPVEVRQAR 307 (339)
Q Consensus 229 ~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~-~h~~~~~~~~~~~ 307 (339)
.|..+... .....++++.+.+ ..++.+.|+..||.++.+....+...|+.. ....++...
T Consensus 270 ---~~~~~~~~---------~~~~~~~~~~~~~---~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 330 (367)
T 3nyt_A 270 ---TPFIEVNN---------ISVYAQYTVRMDN---RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGD---- 330 (367)
T ss_dssp ---CCCCCTTE---------ECCCSSEEEECSS---HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHH----
T ss_pred ---ccCCCCCC---------ceeeEEEEEEeCC---HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHH----
Confidence 22111100 1123456666653 346677777788888866432333333321 111222111
Q ss_pred CCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 308 GLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 308 g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
.+..+.||++++...+++.++.+.+++++.
T Consensus 331 ~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 331 KAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred HHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 123468999999999999999999998864
No 24
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.90 E-value=2.1e-22 Score=193.77 Aligned_cols=241 Identities=16% Similarity=0.175 Sum_probs=175.4
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
..+..++|++++++++|.+++++++||++|+..+ ..++++||+|+++.+.|......+.
T Consensus 107 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~ 186 (427)
T 2w8t_A 107 TFHDHMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHNSVEDLDKR 186 (427)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECTTCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCCCCHHHHHHH
Confidence 3577899999999999999999999999998754 4578999999999988765542221
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---------cccCCCeEEEecccccc
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFI 155 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~~---------~~~~~~Di~~~S~sK~l 155 (339)
++|.++|++||+++|+|++|+.+.... .+..++|++++|+||++
T Consensus 187 l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~ 266 (427)
T 2w8t_A 187 LGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSV 266 (427)
T ss_dssp HHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTT
T ss_pred HHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhh
Confidence 899999999999999999998876531 11225799999999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHH-H-HhcCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHhCCCCceEE
Q 019543 156 AGHSDVMAGVLAVKGERLAKELYFL-Q-NAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKV 230 (339)
Q Consensus 156 ~g~~~~~gG~v~~~~~~l~~~l~~~-~-~~~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L~~~~~i~~v 230 (339)
+. .||++++++ ++++.++.. + ..+++.+++...+.+...++.+ +.+.++..++.+++.+.|+++ ++..
T Consensus 267 g~----~gG~v~~~~-~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~- 339 (427)
T 2w8t_A 267 GT----VGGFVVSNH-PKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM-GFRL- 339 (427)
T ss_dssp CS----CCEEEEECC-TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH-TCEE-
T ss_pred cc----CCCEEEeCH-HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCcc-
Confidence 83 358998875 677766554 2 2356677787666555555544 667788888999999999876 4331
Q ss_pred ecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCC
Q 019543 231 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 310 (339)
Q Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~ 310 (339)
..+. +.+++++|.+++.....++.+.|...|+.++.|.. |.. + -.
T Consensus 340 ~~~~---------------~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~------~~~------~--------~~ 384 (427)
T 2w8t_A 340 GTET---------------CDSAIVAVMLEDQEQAAMMWQALLDGGLYVNMARP------PAT------P--------AG 384 (427)
T ss_dssp SCSS---------------CCSSEEEEEESSHHHHHHHHHHHHHTTEECEEECT------TTS------C--------TT
T ss_pred cCCC---------------CCCCEEEEEECCHHHHHHHHHHHHHCCeEEeeeCC------CCC------C--------CC
Confidence 1121 14679999998766677888888777887765432 211 1 12
Q ss_pred CCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 311 EDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 311 ~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.+.+|||++..++++.++.+.++|+
T Consensus 385 ~~~lRi~~~~~~t~e~i~~~~~~l~ 409 (427)
T 2w8t_A 385 TFLLRCSICAEHTPAQIQTVLGMFQ 409 (427)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 4689999998766666666666554
No 25
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.89 E-value=6.5e-22 Score=186.16 Aligned_cols=263 Identities=16% Similarity=0.150 Sum_probs=181.4
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh-cCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL-LGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l-l~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.++..++||+.++++++.+++++++||++|+.+++ .+ +++||+|+++.+.|++....+.
T Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ 115 (374)
T 3uwc_A 36 LGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSENGYVIDP 115 (374)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCG
T ss_pred cChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCCCcCH
Confidence 46789999999999999999999999999998654 57 8999999999999988765443
Q ss_pred --------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--cccCCCeEEEeccc--cccccCCCc
Q 019543 112 --------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR--PLELGADIVMHSAT--KFIAGHSDV 161 (339)
Q Consensus 112 --------------------------~~I~~la~~~g~~livD~a~a~g~~~~--~~~~~~Di~~~S~s--K~l~g~~~~ 161 (339)
++|.++|++||+++|+|++|+.|.... ......|++++|+| |++++++.
T Consensus 116 ~~l~~~~~~~~~~v~~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K~l~~~g~- 194 (374)
T 3uwc_A 116 EKIEAAITDKTKAIMPVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLKNLNVWSD- 194 (374)
T ss_dssp GGTGGGCCTTEEEECCBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSSSSCCSSC-
T ss_pred HHHHHhCCCCceEEEEeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCCcCCccce-
Confidence 999999999999999999999875433 22333699999977 99986543
Q ss_pred eEEEEEEcChhHHHHHHHHHHh------------cCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCC-ce
Q 019543 162 MAGVLAVKGERLAKELYFLQNA------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR-VK 228 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~~~~~------------~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~-i~ 228 (339)
||+++++++.+.+.++..+.. +...+++..+++....++.++...+++.++++++.+.|+++++ +.
T Consensus 195 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 273 (374)
T 3uwc_A 195 -AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFID 273 (374)
T ss_dssp -CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEE
T ss_pred -eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEE
Confidence 789988876777777665421 1234567777777777777888888888999999999998876 54
Q ss_pred EEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceecccccc----CCCCCHHHH
Q 019543 229 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS----HASIPVEVR 304 (339)
Q Consensus 229 ~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~----h~~~~~~~~ 304 (339)
. |..+... ......+++...+ ..++.+.|+..|+.++.|...++...|.... ...++..
T Consensus 274 ~---~~~~~~~---------~~~~~~~~~~~~~---~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 336 (374)
T 3uwc_A 274 V---PVRREGV---------YHVFHIYVLRVKY---RDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMA-- 336 (374)
T ss_dssp C---CCCCTTE---------ECCCSSEEEEETT---HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHH--
T ss_pred e---ccCCCCC---------ceeeEEEEEEcCC---HHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccH--
Confidence 2 2211100 0111344444443 3456677777788888765333322222110 0011100
Q ss_pred HhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 305 QARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 305 ~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+..+.|||+++...+++.|+.+.++|++
T Consensus 337 --~~~~~~~lrl~~~~~~t~edi~~~~~~l~~ 366 (374)
T 3uwc_A 337 --EKHGEAVITLPAHPYLTEEEINYIIKKVRE 366 (374)
T ss_dssp --HHHHHHEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred --HHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 001236899999987777777777776653
No 26
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.89 E-value=1.8e-21 Score=184.32 Aligned_cols=242 Identities=16% Similarity=0.174 Sum_probs=172.3
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
..+..++|++.+++++|.++.++++||++|+.. +..+++|||+|+++.+.|+.....++
T Consensus 86 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~ 165 (399)
T 3tqx_A 86 TQTIHKELEKDISEFLGTDDTILYSSCFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKNNAMGDLEAK 165 (399)
T ss_dssp CBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECTTCTTHHHHH
T ss_pred CchHHHHHHHHHHHHHCCCcEEEECchHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCCCCHHHHHHH
Confidence 456789999999999999999999999999875 44588999999999998876543222
Q ss_pred -----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc----c---c--CCCeEEEecccc
Q 019543 112 -----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP----L---E--LGADIVMHSATK 153 (339)
Q Consensus 112 -----------------------------~~I~~la~~~g~~livD~a~a~g~~~~~----~---~--~~~Di~~~S~sK 153 (339)
++|.++|++||+++|+|++|+.+..... . . .+.|++++|+||
T Consensus 166 l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK 245 (399)
T 3tqx_A 166 LKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGK 245 (399)
T ss_dssp HHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSS
T ss_pred HHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchH
Confidence 8999999999999999999987654321 1 1 256999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHHHHHhCCCCc
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRV 227 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~~L~~~~~i 227 (339)
+++|+ .||++++++ ++++.+..... .++...++...+.+...++. .+...++..++.+++.+.|+++ ++
T Consensus 246 ~~~g~---~gG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 320 (399)
T 3tqx_A 246 ALGGA---SGGYTSGHK-EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL-GF 320 (399)
T ss_dssp SSCSS---CCEEEEECH-HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred hcccC---ceEEEEcCH-HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 99943 468998875 67777776422 34556777665555555543 3566777778888899988876 33
Q ss_pred eEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhC
Q 019543 228 KKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQAR 307 (339)
Q Consensus 228 ~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~ 307 (339)
..+ + +.++++++.+.+.....++.+.|...|+.++.+. .+.. +
T Consensus 321 ~~~--~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~------~~~~------~------- 363 (399)
T 3tqx_A 321 QLV--P----------------GNHPIIPVMLGDAQLATNMADHLLQEGIYVVGFS------YPVV------P------- 363 (399)
T ss_dssp CBC--C----------------CSSSEEEEEEECHHHHHHHHHHHHHTTEECCEEC------TTTS------C-------
T ss_pred CcC--C----------------CCCCEEEEEeCCHHHHHHHHHHHHHCCCEEeeeC------CCCC------C-------
Confidence 211 1 2567899988776667788888877788776332 1110 0
Q ss_pred CCCCCeEEEEeccCCH----HHHHHHHHHHHhcC
Q 019543 308 GLTEDLVRISVGIEDV----NDLISDLDKALRTG 337 (339)
Q Consensus 308 g~~~~~lRisvg~e~~----~~li~~l~~al~~~ 337 (339)
-.++.+|||++...+ +.+++.|.++++++
T Consensus 364 -~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 364 -MGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp -TTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred -CCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 134689999985444 44455555555544
No 27
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.88 E-value=3.1e-22 Score=192.98 Aligned_cols=213 Identities=18% Similarity=0.222 Sum_probs=166.7
Q ss_pred CCcccCCCCchHHHHHHHHHhHhCCCeEEE---cCcHHHHHHHHH-HhcCCCCEEEEcC-CCccchHHHH----------
Q 019543 46 PYDYTRSGNPTRDALESLLAKLDKADRALC---FTSGMAALAAVT-HLLGTGEEIVAGD-DLYGGTDRLL---------- 110 (339)
Q Consensus 46 ~~~y~r~~~~~~~~le~~la~~~g~~~~l~---~~sG~~A~~~il-~ll~~GD~Vi~~~-~~y~~~~~~~---------- 110 (339)
+|.|+ .+.+++||+.+++++|.+.+++ ++||++|+.+++ ++++|||+|++++ +.|+.+...+
T Consensus 59 g~~y~---~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~ 135 (431)
T 3ht4_A 59 GYGYD---DIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSF 135 (431)
T ss_dssp TTCCS---CHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCS
T ss_pred CCCCC---hhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchH
Confidence 34455 3468999999999999998887 899999998654 5899999999998 7777655322
Q ss_pred ---H-------------------------------------------------HHHHHHHHH--cCCEEEEeCCcCCCCC
Q 019543 111 ---S-------------------------------------------------RKIAEMAHA--HGALLLVDNSIMSPVL 136 (339)
Q Consensus 111 ---~-------------------------------------------------~~I~~la~~--~g~~livD~a~a~g~~ 136 (339)
. ++|+++|++ +|+++++|++|+.+..
T Consensus 136 ~~~G~~~~~v~~~~~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~ 215 (431)
T 3ht4_A 136 KEYNIGYNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIE 215 (431)
T ss_dssp GGGTCEEEECCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSS
T ss_pred HHcCCEEEEeCCCCCCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhcc
Confidence 0 899999999 9999999999998864
Q ss_pred -cCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh--cCCC--CChHHHHHHHhchhhHHHHHHHHH
Q 019543 137 -SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSG--LAPFDCWICLRGVKTMALRVEKQQ 211 (339)
Q Consensus 137 -~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--~~~~--~~~~~a~~~~~~l~~~~~r~~~~~ 211 (339)
.++...++|++++|++|+++|+.+..||+++++ +++++.++..... .+.. .++..+++++.+++.++.+++++.
T Consensus 216 ~~~~~~~g~Di~~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 294 (431)
T 3ht4_A 216 EQEPCHVGADLMAGSLIKNPGGGIVKTGGYIVGK-EQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQAL 294 (431)
T ss_dssp SCCGGGTTCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCccccCCeEEEcCccccCCCCCCCceEEEEec-HHHHHHHHHHhccCCcccccCccHHHHHHHHhHhhhHHHHHHHHH
Confidence 566777899999999999998666678999987 4788888765432 2222 222335567788888999999999
Q ss_pred HHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcce
Q 019543 212 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 276 (339)
Q Consensus 212 ~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~ 276 (339)
+++++++++|++++. .+ +|. ++++ +.+-+++|.+++.+++.+|++.|+.+.
T Consensus 295 ~~a~~l~~~L~~~g~--~v-~p~-~~~~----------~~~li~~i~l~~~~~~~~~~~~l~~~~ 345 (431)
T 3ht4_A 295 KGAIFTAAFLEKLGM--NT-SPA-WNAP----------RTDLIQSVQFDDKDRMIAFCQAIQYAS 345 (431)
T ss_dssp HHHHHHHHHHHHHTC--CE-ESC-TTSC----------CSSSCCEEECCCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCcC--Ee-cCC-CCCC----------CccEEEEEEeCCHHHHHHHHHHHHhcC
Confidence 999999999998763 34 565 3333 234599999998888999999988764
No 28
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.88 E-value=2.8e-21 Score=183.21 Aligned_cols=264 Identities=14% Similarity=0.119 Sum_probs=187.3
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh-cCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL-LGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l-l~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.++...+||+.+++++|.+++++++||++|+.+++ .+ +++||+|+++++.|.+....+.
T Consensus 54 ~~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 133 (391)
T 3dr4_A 54 VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLD 133 (391)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBC
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCccccCcC
Confidence 46789999999999999999999999999998644 56 8999999999999988765443
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc--ccCCCeEEEeccc--cccccCCC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP--LELGADIVMHSAT--KFIAGHSD 160 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~~~--~~~~~Di~~~S~s--K~l~g~~~ 160 (339)
++|.++|++||+++|+|++|+.|..... .....|+.+.||+ |++++ +
T Consensus 134 ~~~l~~~~~~~~~~v~~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~-g- 211 (391)
T 3dr4_A 134 AAKLEALITPRTKAIMPVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITT-G- 211 (391)
T ss_dssp GGGSGGGCCTTEEEECCBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCC-B-
T ss_pred HHHHHHhcCCCceEEEEECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCc-C-
Confidence 9999999999999999999998764322 2222478888866 99975 2
Q ss_pred ceEEEEEEcChhHHHHHHHHHHhc--------------CCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCC
Q 019543 161 VMAGVLAVKGERLAKELYFLQNAE--------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR 226 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~~--------------~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~ 226 (339)
.||+++++++.+.+.++..+... ...++++.+++....++.++...++++++++++.+.|++. +
T Consensus 212 -~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 289 (391)
T 3dr4_A 212 -EGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-G 289 (391)
T ss_dssp -SCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-T
T ss_pred -CeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-C
Confidence 47888888766777776654211 1356677777777677777888888889999999999987 6
Q ss_pred ceEEec--CCCCCCCchHhHhhhcCCCcceEEEeeCC--HHHHHHHHccCCcceeecccCCcccceecccccc--CCCCC
Q 019543 227 VKKVNY--AGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMS--HASIP 300 (339)
Q Consensus 227 i~~v~~--p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~--h~~~~ 300 (339)
+..... +. . ......++++.+.+ .....++.+.|...||.++.|.. .+...|.... ...++
T Consensus 290 ~~~~~~~~~~---~---------~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~-p~~~~~~~~~~~~~~~~ 356 (391)
T 3dr4_A 290 NRVTKPHVAL---T---------GRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFH-PMHIMPPYAHLATDDLK 356 (391)
T ss_dssp TSEECCCCCT---T---------SCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCC-CGGGSGGGGGGCCTTCH
T ss_pred ccccCcCCCC---C---------CcceeEEEEEEECCccchhHHHHHHHHHHCCCceeecCC-ccccChhhhhcCcCCCh
Confidence 553322 11 0 01234567887754 22356777788777998885532 2222222111 11122
Q ss_pred HHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 301 VEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 301 ~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
...+ +..+.||++++...+++.|+.+.++|+++
T Consensus 357 ~~~~----~~~~~lrl~~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 357 IAEA----CGVDGLNLPTHAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp HHHH----HHHHEEEECCCTTCCHHHHHHHHHHHHTT
T ss_pred HHHH----HHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 1111 12467999999999999999999998864
No 29
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.88 E-value=4.4e-21 Score=183.10 Aligned_cols=238 Identities=16% Similarity=0.135 Sum_probs=170.3
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
..+..+++++++++++|.+.+++++||++|+.. +.++++|||+|+++++.|......+.
T Consensus 102 ~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~le~~ 181 (409)
T 3kki_A 102 NDYDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMHNNCDHLRML 181 (409)
T ss_dssp STTTSCHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECTTCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCCeEEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecCCCHHHHHHH
Confidence 346788999999999999999999999999875 55689999999999998876543322
Q ss_pred ------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c------ccCCCeEEEeccccccccC
Q 019543 112 ------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P------LELGADIVMHSATKFIAGH 158 (339)
Q Consensus 112 ------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~------~~~~~Di~~~S~sK~l~g~ 158 (339)
++|.++|++||++||+|++|+.+.++. . .....||++.|+||++++.
T Consensus 182 l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~ 261 (409)
T 3kki_A 182 IQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR 261 (409)
T ss_dssp HHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS
T ss_pred HHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC
Confidence 999999999999999999998765421 1 1124689999999999854
Q ss_pred CCceEEEEEEcChhHHHHHHHHH--HhcCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHhCCCCceEEecC
Q 019543 159 SDVMAGVLAVKGERLAKELYFLQ--NAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYA 233 (339)
Q Consensus 159 ~~~~gG~v~~~~~~l~~~l~~~~--~~~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p 233 (339)
||++++++ ++++.++... ..++..+++..++.+...++.+ +...++..++.+++.+.|+++. +. .
T Consensus 262 ----gg~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~---~- 331 (409)
T 3kki_A 262 ----AGAIWCNN-EVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLG-LT---I- 331 (409)
T ss_dssp ----CEEEEESS-SGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTT-CC---C-
T ss_pred ----ceEEEECH-HHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-Cc---c-
Confidence 58888876 5666665532 2345567776655555555443 4566677788899999998762 21 1
Q ss_pred CCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCe
Q 019543 234 GLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDL 313 (339)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~ 313 (339)
.+.+.++++.+++...+.++.+.|...|+.++.+. .|.. + ..++.
T Consensus 332 ---------------~~~~~~~~~~~~~~~~~~~~~~~L~~~Gv~v~~~~------~~~~------~--------~~~~~ 376 (409)
T 3kki_A 332 ---------------RSESQIIGLETGDERNTEKVRDYLESNGVFGSVFC------RPAT------S--------KNKNI 376 (409)
T ss_dssp ---------------CCSSSEEEEEEESHHHHHHHHHHHHHTTEECEEEC------TTSS------C--------TTCEE
T ss_pred ---------------CCCCCEEEEEeCCHHHHHHHHHHHHHCCceEeeeC------CCCc------C--------CCCcE
Confidence 12567899988776666778888877787765321 1111 0 13578
Q ss_pred EEEEeccCCHHHHHHHHHHHHh
Q 019543 314 VRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 314 lRisvg~e~~~~li~~l~~al~ 335 (339)
|||+++...+++.++.+.++|+
T Consensus 377 iRi~~~~~~t~e~i~~~~~~l~ 398 (409)
T 3kki_A 377 IRLSLNSDVNDEQIAKIIEVCS 398 (409)
T ss_dssp EEEECCTTCCHHHHHHHHHHHH
T ss_pred EEEEccCCCCHHHHHHHHHHHH
Confidence 9999987666555555555544
No 30
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.88 E-value=2.8e-21 Score=182.99 Aligned_cols=266 Identities=14% Similarity=0.172 Sum_probs=180.1
Q ss_pred CCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh-cCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 51 RSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL-LGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l-l~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
+..++..++||+++++++|.++.++++||++|+.+++ .+ +++||+|+++.+.|.+....+.
T Consensus 34 ~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 113 (388)
T 1b9h_A 34 RMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYN 113 (388)
T ss_dssp TTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCC
T ss_pred ecCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCC
Confidence 3457889999999999999999999999999998654 46 7899999999999887654333
Q ss_pred -----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--cc-cCCCeEEEeccc--ccccc
Q 019543 112 -----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR--PL-ELGADIVMHSAT--KFIAG 157 (339)
Q Consensus 112 -----------------------------~~I~~la~~~g~~livD~a~a~g~~~~--~~-~~~~Di~~~S~s--K~l~g 157 (339)
++|.++|++||++||+|++|+.|.... .. .++ |+.+.||| |+++|
T Consensus 114 ~d~~~l~~~i~~~~~~v~~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~-~i~~~S~s~~K~l~g 192 (388)
T 1b9h_A 114 LDPEAVAAAVTPRTKVIMPVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELD-SIATFSFQNGKLMTA 192 (388)
T ss_dssp BCHHHHHHHCCTTEEEECCBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSS-SCEEEECCTTSSSCS
T ss_pred CCHHHHHHhcCcCceEEEEeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeeccccc-ceEEEEccCCCcccC
Confidence 999999999999999999998875432 22 223 67788876 77764
Q ss_pred CCCceEEEEEEcChhH--HHHHHHHHHh-------------cCC--CCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Q 019543 158 HSDVMAGVLAVKGERL--AKELYFLQNA-------------EGS--GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEF 220 (339)
Q Consensus 158 ~~~~~gG~v~~~~~~l--~~~l~~~~~~-------------~~~--~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~ 220 (339)
+ .||+++++++.+ .+.++..... .|+ .+++..++++..+++.++.+.++++++++++.+.
T Consensus 193 ~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~l~~~ 269 (388)
T 1b9h_A 193 G---EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVRDERWTLLSRL 269 (388)
T ss_dssp S---SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred C---CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 478998886445 4555433211 012 2567766666667778888888888999999999
Q ss_pred HhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccCCcceeecccCCcccceecccccc--C
Q 019543 221 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMS--H 296 (339)
Q Consensus 221 L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~--h 296 (339)
|+++++++.+. +. +.. ....+.+++|.+++. ....++.+.|...||.++.|.. .....|.... .
T Consensus 270 L~~~~~~~~~~-~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~~~~~~~~~~~~~ 337 (388)
T 1b9h_A 270 LGAIDGVVPQG-GD-VRA---------DRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFR-AIYRTDAFWELGA 337 (388)
T ss_dssp HHTSTTCEECC-CC-TTC---------CBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCC-CGGGSHHHHHSSC
T ss_pred hccCCCccccC-CC-cCC---------CccceEEEEEEeCCcCcccHHHHHHHHHHCCCCcccccC-ccccChHhHhcCC
Confidence 99888765321 11 000 011357889988642 3456788888777888875532 1111111000 0
Q ss_pred C---------CCCHHHHHhCCCCCCeEEEEeccCC-HHHHHHHHHHHHhc
Q 019543 297 A---------SIPVEVRQARGLTEDLVRISVGIED-VNDLISDLDKALRT 336 (339)
Q Consensus 297 ~---------~~~~~~~~~~g~~~~~lRisvg~e~-~~~li~~l~~al~~ 336 (339)
. .++...+ +..+.|||+++... +++.++.+.++|++
T Consensus 338 ~~~~~~~~~~~~~~~~~----~~~~~l~l~~~~~~~t~edi~~~~~~l~~ 383 (388)
T 1b9h_A 338 PDESVDAIARRCPNTDA----ISSDCVWLHHRVLLAGEPELHATAEIIAD 383 (388)
T ss_dssp CSSCHHHHHHTCHHHHH----HHHHEEEEEGGGGGSCHHHHHHHHHHHHH
T ss_pred CcccccccccCCHHHHH----HHhCeEEecCCCCCCCHHHHHHHHHHHHH
Confidence 0 0111100 12357999999888 77778888877764
No 31
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.88 E-value=7.9e-21 Score=179.48 Aligned_cols=240 Identities=17% Similarity=0.161 Sum_probs=175.0
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
..+...+|++.+++++|.++.++++||++|+..+ ..+++|||+|+++.+.|+.....+.
T Consensus 82 ~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~ 161 (384)
T 1bs0_A 82 YSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARL 161 (384)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCCCCHHHHHHH
Confidence 4478899999999999999999999999998754 4578999999999998876543322
Q ss_pred --------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc---Cc----ccCCCeEEEeccccccccC
Q 019543 112 --------------------------RKIAEMAHAHGALLLVDNSIMSPVLS---RP----LELGADIVMHSATKFIAGH 158 (339)
Q Consensus 112 --------------------------~~I~~la~~~g~~livD~a~a~g~~~---~~----~~~~~Di~~~S~sK~l~g~ 158 (339)
++|.++|++||+++|+|++|+.+... .. ...+.|++++|+||+++.+
T Consensus 162 l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~ 241 (384)
T 1bs0_A 162 LASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVS 241 (384)
T ss_dssp HHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSC
T ss_pred HHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhcc
Confidence 99999999999999999999877542 21 1235799999999999843
Q ss_pred CCceEEEEEEcChhHHHHHHHHH-H-hcCCCCChHHHHHHHhchhhH-----HHHHHHHHHHHHHHHHHHhCCCCceEEe
Q 019543 159 SDVMAGVLAVKGERLAKELYFLQ-N-AEGSGLAPFDCWICLRGVKTM-----ALRVEKQQDNAQKIAEFLASHPRVKKVN 231 (339)
Q Consensus 159 ~~~~gG~v~~~~~~l~~~l~~~~-~-~~~~~~~~~~a~~~~~~l~~~-----~~r~~~~~~~a~~l~~~L~~~~~i~~v~ 231 (339)
||+++++ +++++.++... . ..++..++...+.+...++.+ +.+.++..++.+++.+.|+++ +++ +
T Consensus 242 ----GG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~- 313 (384)
T 1bs0_A 242 ----GAAVLCS-STVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFT-L- 313 (384)
T ss_dssp ----CEEEEEC-HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCE-E-
T ss_pred ----CcEEEeC-HHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCc-c-
Confidence 4888886 46777776542 2 234457777665554444433 456677788899999999886 333 1
Q ss_pred cCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCC
Q 019543 232 YAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 311 (339)
Q Consensus 232 ~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~ 311 (339)
+| +.++++++.+++.....++.+.|...|+.++.|..+. . + ..+
T Consensus 314 ~~----------------~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~------~------~--------~~~ 357 (384)
T 1bs0_A 314 AD----------------SCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPT------V------P--------AGT 357 (384)
T ss_dssp CS----------------CCSSBCCEEEESHHHHHHHHHHHHHTTEECCEECTTS------S------C--------TTC
T ss_pred cC----------------CCCCEEEEEeCCHHHHHHHHHHHHHCCcEEEeecCCC------C------C--------CCC
Confidence 12 1456778877655556778888877788877554211 0 0 134
Q ss_pred CeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 312 DLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 312 ~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+.+|||++..++++.++.+.++|++
T Consensus 358 ~~~Ri~~~~~~~~~~i~~~~~~l~~ 382 (384)
T 1bs0_A 358 ARLRLTLTAAHEMQDIDRLLEVLHG 382 (384)
T ss_dssp EEECCBCCTTCCHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCHHHHHHHHHHHHh
Confidence 6899999998888888888888865
No 32
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.87 E-value=7.7e-21 Score=180.99 Aligned_cols=262 Identities=18% Similarity=0.201 Sum_probs=174.3
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh-cCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL-LGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l-l~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
++...++++.+++++|.+++++++||++|+..++ .+ +++||+|+++.+.|++....+.
T Consensus 62 ~~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~ 141 (399)
T 2oga_A 62 GPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDP 141 (399)
T ss_dssp SHHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCH
T ss_pred chhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCH
Confidence 4778999999999999999999999999998655 46 7899999999998887654332
Q ss_pred --------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCC--CeEEEecc--ccccccCCCc
Q 019543 112 --------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSA--TKFIAGHSDV 161 (339)
Q Consensus 112 --------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~--~Di~~~S~--sK~l~g~~~~ 161 (339)
++|.++|+++|+++|+|++|+.+...+....+ .|++++|+ +|+++++|
T Consensus 142 ~~l~~~i~~~~~~v~~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK~~~~~G-- 219 (399)
T 2oga_A 142 LLVEKAITPRTRALLPVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGKNLGCFG-- 219 (399)
T ss_dssp HHHHHHCCTTEEEECCBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTTSSSCCSS--
T ss_pred HHHHHhcCCCCeEEEEeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCCccCCcCC--
Confidence 99999999999999999999877533322223 69999999 79998755
Q ss_pred eEEEEEEcChhHHHHHHHHHHhc----------C--CCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 162 MAGVLAVKGERLAKELYFLQNAE----------G--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~~~~~~----------~--~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
.||+++++++++.+.++..+... + ..+++..++++..+++.++...+++.++++++.+.|+++++++.
T Consensus 220 ~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 299 (399)
T 2oga_A 220 DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGLAGLPGIGL 299 (399)
T ss_dssp CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCTTCBC
T ss_pred ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 47888887667777776654321 1 25678877777778888877788888889999999998877542
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccC----CCCCHHHHH
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH----ASIPVEVRQ 305 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h----~~~~~~~~~ 305 (339)
...| +.. ......+++...+ ..++.+.|...|+.++.+........|..... ..++....
T Consensus 300 ~~~~---~~~---------~~~~~~~~~~~~~---~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~- 363 (399)
T 2oga_A 300 PVTA---PDT---------DPVWHLFTVRTER---RDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAES- 363 (399)
T ss_dssp CCCC---TTE---------ECCCSSEEEECSS---HHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHH-
T ss_pred cCCC---CCC---------cceeEEEEEECCC---HHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHH-
Confidence 1111 100 0000123443222 34566777667887775421111000100000 00000000
Q ss_pred hCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 306 ARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 306 ~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+..+.|||+++...+++.++.+.++|++
T Consensus 364 ---~~~~~lRi~~~~~~t~edi~~~~~~l~~ 391 (399)
T 2oga_A 364 ---FARQVLSLPIGPHLERPQALRVIDAVRE 391 (399)
T ss_dssp ---HHHHEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred ---HHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence 0125799999887777666776666653
No 33
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.87 E-value=3.8e-21 Score=182.05 Aligned_cols=264 Identities=14% Similarity=0.180 Sum_probs=181.2
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh-cCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL-LGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l-l~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.++..++||+.+++++|.+++++++||++|+.+++ .+ ++|||+|+++++.|++....+.
T Consensus 37 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d 116 (393)
T 1mdo_A 37 TGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVT 116 (393)
T ss_dssp SSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBC
T ss_pred CChHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCC
Confidence 35788999999999999999999999999998655 46 7999999999999887654333
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCC-CeEEEeccc--cccccCCCc
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELG-ADIVMHSAT--KFIAGHSDV 161 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~-~Di~~~S~s--K~l~g~~~~ 161 (339)
++|.++|++||+++|+|++|+.|........+ .|++++|+| |++++.
T Consensus 117 ~~~l~~~l~~~~~~v~~~~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K~l~~~--- 193 (393)
T 1mdo_A 117 PEHIEAAITPQTKAIIPVHYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITCA--- 193 (393)
T ss_dssp HHHHHHHCCTTEEEECCBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTSSSCSS---
T ss_pred HHHHHHhcCCCceEEEEeCCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCCccccc---
Confidence 99999999999999999999877432222234 899999999 999752
Q ss_pred eEEEEEEcChhHHHHHHHHHHhc----------------------C--CCCChHHHHHHHhchhhHHHHHHHHHHHHHHH
Q 019543 162 MAGVLAVKGERLAKELYFLQNAE----------------------G--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKI 217 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~~~~~~----------------------~--~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l 217 (339)
.||+++++++++.+.++..+... | ..++++.++++...++.++...++++++++++
T Consensus 194 ~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l 273 (393)
T 1mdo_A 194 EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAAIAAQY 273 (393)
T ss_dssp SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899887557777776543210 1 23577777777777777888888888899999
Q ss_pred HHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC---HHHHHHHHccCCcceeecccCCcccceeccccc
Q 019543 218 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LALSKHVVETTKYFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 218 ~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~---~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~ 294 (339)
.+.|++++ ++....|.. . ..+.+.+++|.+.+ .....++.+.|...|+.++.|.... ...|...
T Consensus 274 ~~~L~~~~-~~~~~~~~~-~----------~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~-~~~~~~~ 340 (393)
T 1mdo_A 274 HQAMADLP-FQPLSLPSW-E----------HIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAA-HTQKYYR 340 (393)
T ss_dssp HHHHHTSS-CEECCCCSS-C----------EECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCG-GGSHHHH
T ss_pred HHHHhcCC-cccccCCCC-C----------CCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCcc-ccChhhh
Confidence 99999876 432111100 0 01234578888752 1234577778877888888664210 0011000
Q ss_pred c---CCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 295 S---HASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 295 ~---h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
. ...++.. ++ +..+.||++++...+++.++.+.++|++
T Consensus 341 ~~~~~~~~~~~--~~--~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 381 (393)
T 1mdo_A 341 ERFPTLTLPDT--EW--NSERICSLPLFPDMTESDFDRVITALHQ 381 (393)
T ss_dssp HHSTTCCCHHH--HH--HHTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ccCCccCChhH--HH--HHhCEEEecCCCCCCHHHHHHHHHHHHH
Confidence 0 0001100 00 1245799999987777777777777764
No 34
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.87 E-value=1.1e-20 Score=179.55 Aligned_cols=239 Identities=16% Similarity=0.181 Sum_probs=170.3
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchHHHH----------------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLL---------------------- 110 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~~~~---------------------- 110 (339)
.+...+|++++++++|.++.++++||++|+.. +..+++|||+|+++.+.|+.....+
T Consensus 89 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l 168 (401)
T 1fc4_A 89 QDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARL 168 (401)
T ss_dssp BHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECCCCHHHHHHHH
Confidence 57789999999999999899999999999875 4457899999999998875443211
Q ss_pred --------H-------------------HHHHHHHHHcCCEEEEeCCcCCCCCc---Cc------ccCCCeEEEeccccc
Q 019543 111 --------S-------------------RKIAEMAHAHGALLLVDNSIMSPVLS---RP------LELGADIVMHSATKF 154 (339)
Q Consensus 111 --------~-------------------~~I~~la~~~g~~livD~a~a~g~~~---~~------~~~~~Di~~~S~sK~ 154 (339)
+ ++|.++|++||+++|+|++|+.+... .. +..+.|++++|+||+
T Consensus 169 ~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~ 248 (401)
T 1fc4_A 169 KEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKA 248 (401)
T ss_dssp HHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSST
T ss_pred HHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhh
Confidence 1 89999999999999999999766532 11 122569999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
++++. ||+++++ +++++.++.... .++..+++..++.+...++.+ +...++..++.+++.+.|+++ +++.
T Consensus 249 ~~~~~---gG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 323 (401)
T 1fc4_A 249 LGGAS---GGYTAAR-KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTL 323 (401)
T ss_dssp TCSSS---CEEEEEC-HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred ccCCC---CEEEEcC-HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCcc
Confidence 95432 5888886 477777766432 235677887777666666655 466777788899999999876 4432
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 309 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~ 309 (339)
+| +.++++++.+.+.....++.+.|...|+.++.|..+. . + -
T Consensus 324 --~~----------------~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~------~------~--------~ 365 (401)
T 1fc4_A 324 --AG----------------ADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPV------V------P--------K 365 (401)
T ss_dssp --CC----------------SSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTS------S------C--------T
T ss_pred --cC----------------CCCCEEEEEcCChHHHHHHHHHHHHCCcEEeeecCCC------C------C--------C
Confidence 12 2567889988665556778888877788877553211 0 0 0
Q ss_pred CCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 310 TEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 310 ~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.++.+|||++...+++.++.+.++|+
T Consensus 366 ~~~~iRi~~~~~~~~~~i~~~~~~l~ 391 (401)
T 1fc4_A 366 GQARIRTQMSAAHTPEQITRAVEAFT 391 (401)
T ss_dssp TCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 24679999996555554454444443
No 35
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.87 E-value=3.5e-21 Score=181.29 Aligned_cols=243 Identities=14% Similarity=0.105 Sum_probs=167.4
Q ss_pred CCchHHHHHHHHHhHhC---CCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 53 GNPTRDALESLLAKLDK---ADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g---~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
..+...+|++.++++++ .+++++++||++|+.++ ..+++|||+|+++.+.|.+....+.
T Consensus 61 ~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 140 (375)
T 3op7_A 61 WIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGW 140 (375)
T ss_dssp CTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTT
T ss_pred CCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCC
Confidence 34557899999999863 36899999999999864 4588999999999999987654433
Q ss_pred ------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc---c-cCCCeEEEecc
Q 019543 112 ------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP---L-ELGADIVMHSA 151 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~---~-~~~~Di~~~S~ 151 (339)
++|.++|++||+++|+|++|+....... . ..+.+++++|+
T Consensus 141 ~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~ 220 (375)
T 3op7_A 141 LPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSL 220 (375)
T ss_dssp EECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEES
T ss_pred CCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEEEeEC
Confidence 8999999999999999999976443211 1 12456999999
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH----HHHHHHHHHHHHHHHHHHhCCCCc
Q 019543 152 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRV 227 (339)
Q Consensus 152 sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~----~~r~~~~~~~a~~l~~~L~~~~~i 227 (339)
||+++.+| ..+|+++++ +++.+.++..+...+...++...+++...++.. +.+.++..++++++.+.|++++++
T Consensus 221 sK~~~~~G-~r~G~v~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 298 (375)
T 3op7_A 221 SKTYSLPG-IRIGWVAAN-HQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLV 298 (375)
T ss_dssp SSSSSCGG-GCCEEEECC-HHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred hhhcCCcc-cceEEEEeC-HHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 99998655 456788774 578888876665555666777666555555443 333444577888899999888776
Q ss_pred eEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcccceeccccccCCCCCHHHHHh
Q 019543 228 KKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 306 (339)
Q Consensus 228 ~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~ 306 (339)
..+ .|. .+..+++.+.......++++.| +..|+.+..|..+.
T Consensus 299 ~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-------------------- 341 (375)
T 3op7_A 299 SYI-RPA----------------VVSTSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFE-------------------- 341 (375)
T ss_dssp EEC-CCS----------------SSSCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGT--------------------
T ss_pred eEe-cCC----------------CeEEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhC--------------------
Confidence 432 221 2334555554333345666665 56788776554211
Q ss_pred CCCCCCeEEEEeccCC--HHHHHHHHHHHHhcC
Q 019543 307 RGLTEDLVRISVGIED--VNDLISDLDKALRTG 337 (339)
Q Consensus 307 ~g~~~~~lRisvg~e~--~~~li~~l~~al~~~ 337 (339)
.++.+|+|++..+ .++.++.|.++++++
T Consensus 342 ---~~~~iRi~~~~~~~~i~~~l~~l~~~l~~~ 371 (375)
T 3op7_A 342 ---RDGYVRLGFACEQETLIKGLEKLSQFLRRF 371 (375)
T ss_dssp ---CTTEEEECCCSCHHHHHHHHHHHHHHHGGG
T ss_pred ---CCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 1468999998753 455566666666543
No 36
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.87 E-value=3.7e-20 Score=175.84 Aligned_cols=244 Identities=17% Similarity=0.175 Sum_probs=170.2
Q ss_pred ccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 49 YTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 49 y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
+..+..+.++++++.+++++|.+++++++||++|+..++ .+++|||+|+++++.|+.....++
T Consensus 82 ~~~g~~~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~~d~~~ 161 (398)
T 3a2b_A 82 FLNGTLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGHNNMED 161 (398)
T ss_dssp TTTCCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECTTCHHH
T ss_pred cccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCCCCHHH
Confidence 333456789999999999999999999999999998654 578999999999998876543221
Q ss_pred -------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc---Ccc-c-----CCCeEEEecc
Q 019543 112 -------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS---RPL-E-----LGADIVMHSA 151 (339)
Q Consensus 112 -------------------------------~~I~~la~~~g~~livD~a~a~g~~~---~~~-~-----~~~Di~~~S~ 151 (339)
++|.++|++||+++|+|++|+.+.+. ... . .++|++++|+
T Consensus 162 l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~ 241 (398)
T 3a2b_A 162 LRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTF 241 (398)
T ss_dssp HHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEES
T ss_pred HHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecc
Confidence 89999999999999999999877542 111 1 1369999999
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHH-HH-hcCCCCChHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHhCCCC
Q 019543 152 TKFIAGHSDVMAGVLAVKGERLAKELYFL-QN-AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPR 226 (339)
Q Consensus 152 sK~l~g~~~~~gG~v~~~~~~l~~~l~~~-~~-~~~~~~~~~~a~~~~~~l~~~---~~r~~~~~~~a~~l~~~L~~~~~ 226 (339)
||+++.+ ||+++++ +++++.++.. .. ..+...++...+.+...|+.+ +.+.++..++.+++.+.|+++ +
T Consensus 242 sK~~~~~----GG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 315 (398)
T 3a2b_A 242 SKSLASL----GGFVAGD-ADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH-G 315 (398)
T ss_dssp SSTTCSS----CEEEEEC-HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT-T
T ss_pred cccccCC----CcEEEeC-HHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc-C
Confidence 9999843 3888886 4777777764 22 334455665544443444433 456667778888899988876 4
Q ss_pred ceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHh
Q 019543 227 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 306 (339)
Q Consensus 227 i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~ 306 (339)
++. ++ +.+.++++.+++.....++.+.|...|+.++.|..+.. +
T Consensus 316 ~~~--~~----------------~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~---~--------------- 359 (398)
T 3a2b_A 316 FDL--GA----------------TESPILPIFIRSNEKTFWVTKMLQDDGVFVNPVVSPAV---P--------------- 359 (398)
T ss_dssp CCB--CS----------------CCSSEEEEECCCHHHHHHHHHHHHHTTEECEEECTTTS---C---------------
T ss_pred CCc--CC----------------CCCCEEEEEcCCHHHHHHHHHHHHHCCcEEEeeCCCCC---C---------------
Confidence 331 11 13678889887655567788888777888776543210 0
Q ss_pred CCCCCCeEEEEeccCCHHH----HHHHHHHHHhc
Q 019543 307 RGLTEDLVRISVGIEDVND----LISDLDKALRT 336 (339)
Q Consensus 307 ~g~~~~~lRisvg~e~~~~----li~~l~~al~~ 336 (339)
..++.+|||++...+++ +++.|.+++++
T Consensus 360 --~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 391 (398)
T 3a2b_A 360 --AEESLIRFSLMATHTYDQIDEAIEKMVKVFKQ 391 (398)
T ss_dssp --GGGCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred --CCCceEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 02478999999744444 44455555443
No 37
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.87 E-value=2.1e-20 Score=178.96 Aligned_cols=265 Identities=17% Similarity=0.158 Sum_probs=177.6
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh-cCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL-LGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l-l~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
..+..+++++.+++++|.+++++++||++|+..++ .+ +++||+|+++.+.|.+....+.
T Consensus 40 ~~~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 119 (418)
T 2c81_A 40 EESMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATAVLNVNALPVFVDVEADTYCID 119 (418)
T ss_dssp SCCHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBC
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHHHHHcCCEEEEEecCCCCCCcC
Confidence 34568999999999999999999999999998654 46 7899999999998887654333
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCC-C-cCcccCCCeEEEecc--ccccccCCC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPV-L-SRPLELGADIVMHSA--TKFIAGHSD 160 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~-~-~~~~~~~~Di~~~S~--sK~l~g~~~ 160 (339)
++|.++|++||++||+|++|+.+. + ........|+.+.|| ||++++ |
T Consensus 120 ~~~l~~~i~~~~~~v~~~~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~-g- 197 (418)
T 2c81_A 120 PQLIKSAITDKTKAIIPVHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTA-G- 197 (418)
T ss_dssp HHHHGGGCCTTEEEECCBCCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCS-S-
T ss_pred HHHHHHhhCCCCeEEEEeCCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcccCC-C-
Confidence 999999999999999999998875 2 222222247888887 999986 4
Q ss_pred ceEEEEEEcChhHHHHHHHHHHh--------------cC------------CCCChHHHHHHHhchhhHHHHHHHHHHHH
Q 019543 161 VMAGVLAVKGERLAKELYFLQNA--------------EG------------SGLAPFDCWICLRGVKTMALRVEKQQDNA 214 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~--------------~~------------~~~~~~~a~~~~~~l~~~~~r~~~~~~~a 214 (339)
.||+++++++++.+.++..+.. +. ..++++.+++....++.++.+.+++++++
T Consensus 198 -~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~ 276 (418)
T 2c81_A 198 -EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNAIREKNA 276 (418)
T ss_dssp -SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred -CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5889988666777777655421 10 11455566666666777888888888899
Q ss_pred HHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC----HHHHHHHHccCCcc-eee---cccCCccc
Q 019543 215 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS----LALSKHVVETTKYF-SIT---VSFGSVKS 286 (339)
Q Consensus 215 ~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~----~~~~~~~~~~L~~~-~i~---v~~G~~~s 286 (339)
+++.+.|+++++++....|. ... .....+++|.+.+ .....++.+.|... ||. ++.|. ..
T Consensus 277 ~~l~~~L~~~~g~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~-~p 344 (418)
T 2c81_A 277 MFLNDALSKIDGIKVMKRPP---QVS--------RQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPY-LP 344 (418)
T ss_dssp HHHHHHHTTSTTEEECCCCT---TEE--------ECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCC-CC
T ss_pred HHHHHHhccCCCcccCCCCC---CCc--------ccccEEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccc-cc
Confidence 99999999888765321110 000 0012467777752 22346778888776 888 77654 11
Q ss_pred ceecccccc--C----------------CCCCHHHHHhCCCCCCeEEEEeccCC-HHHHHHHHHHHHhc
Q 019543 287 LISMPCFMS--H----------------ASIPVEVRQARGLTEDLVRISVGIED-VNDLISDLDKALRT 336 (339)
Q Consensus 287 ~~~~p~~~~--h----------------~~~~~~~~~~~g~~~~~lRisvg~e~-~~~li~~l~~al~~ 336 (339)
....|.... + ..++.... +..+.|||+++... +++.++.+.++|++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lrl~~~~~~gt~edi~~~~~~l~~ 409 (418)
T 2c81_A 345 VHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSER----ASGQSIVIHHAILLAEPSHLSLLVDAVAE 409 (418)
T ss_dssp GGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHH----HHHHEEEEEGGGGGSCHHHHHHHHHHHHH
T ss_pred cccCchhcccccccccccccccccccccCCChHHHH----HHhCEEEecCCccCCCHHHHHHHHHHHHH
Confidence 111111100 0 01110000 11368999998777 77777777777654
No 38
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.86 E-value=1.5e-20 Score=176.57 Aligned_cols=263 Identities=14% Similarity=0.150 Sum_probs=175.6
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh---cCCCCEEEEcCCCccchHHHHH------------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL---LGTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l---l~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
++..+++|+.+++++|.+++++++||++|+.+++ .+ ++|||+|+++++.|++....+.
T Consensus 31 ~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d 110 (375)
T 2fnu_A 31 GKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANMLLESGYTPVFAGIKNDGNID 110 (375)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSBC
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHHHHCCCEEEEeccCCCCCCC
Confidence 5678999999999999999999999999998654 56 7899999999999987765433
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc--ccCCCeEEEeccc--cccccCCC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP--LELGADIVMHSAT--KFIAGHSD 160 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~~~--~~~~~Di~~~S~s--K~l~g~~~ 160 (339)
++|.++|++||+++|+|++|+.+..... +....|+++.|+| |++++ |
T Consensus 111 ~~~l~~~i~~~~~~v~~~~~tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~~~-g- 188 (375)
T 2fnu_A 111 ELALEKLINERTKAIVSVDYAGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITT-A- 188 (375)
T ss_dssp GGGSGGGCCTTEEEEEEECGGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCC-S-
T ss_pred HHHHHhhcCcCceEEEEeCCcCCccCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCccc-c-
Confidence 9999999999999999999987754322 2211378888888 99974 3
Q ss_pred ceEEEEEEcChhHHHHHHHHHHh--------------cC--CCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC
Q 019543 161 VMAGVLAVKGERLAKELYFLQNA--------------EG--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~--------------~~--~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
.||+++.+++++.+.++..... .+ ..++++.++++...++.++.+.++..++++++.+.|+++
T Consensus 189 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 267 (375)
T 2fnu_A 189 -EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDN 267 (375)
T ss_dssp -SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred -CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 4666665555677777654321 11 256777777666667777888888899999999999998
Q ss_pred CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-H-HHHHHHccCCcceeecccCCcccceeccccc---cCCCC
Q 019543 225 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-A-LSKHVVETTKYFSITVSFGSVKSLISMPCFM---SHASI 299 (339)
Q Consensus 225 ~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~-~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~---~h~~~ 299 (339)
++++.. .| ++. ..+.+.++++.+... . ...++.+.|...|+.++.+. .+....+... ....+
T Consensus 268 ~~~~~~-~~--~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~-~p~~~~~~~~~~~~~~~~ 334 (375)
T 2fnu_A 268 PYFTPL-HP--LLK---------DKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHY-KPIYQYQLYQQLFNTAPL 334 (375)
T ss_dssp SSEEES-GG--GCS---------SCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCC-CCGGGSHHHHHHHCCCCC
T ss_pred CCcccc-CC--CCC---------CCcceEEEEEEeCccccchHHHHHHHHHHCCCCccccc-cccccchhhhcCCCccCC
Confidence 775421 11 000 011234556666432 1 45678888877788877321 1111111000 00001
Q ss_pred CHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 300 PVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 300 ~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+... ...++.||||++...+++.++.+.++|++
T Consensus 335 ~~~~----~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 367 (375)
T 2fnu_A 335 KSAE----DFYHAEISLPCHANLNLESVQNIAHSVLK 367 (375)
T ss_dssp HHHH----HHHHHEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred hHHH----HHHhCEEEecCCCCCCHHHHHHHHHHHHH
Confidence 1000 01236799999987777777777777653
No 39
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.86 E-value=1.1e-20 Score=179.67 Aligned_cols=246 Identities=18% Similarity=0.129 Sum_probs=168.9
Q ss_pred CCCCchHHHHHHHHHhHhCC-----CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------
Q 019543 51 RSGNPTRDALESLLAKLDKA-----DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~g~-----~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
++..+.++++++.+++++|. +++++++||++|+..++ .++++||+|+++.+.|.+....+.
T Consensus 78 ~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~ 157 (407)
T 3nra_A 78 RGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDY 157 (407)
T ss_dssp TCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCC
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeeccc
Confidence 34456788999999999886 67888888899998655 478999999999988765432211
Q ss_pred --------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc---
Q 019543 112 --------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL--- 140 (339)
Q Consensus 112 --------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~--- 140 (339)
++|+++|++||+++|+|++|+.+.... .+
T Consensus 158 ~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~ 237 (407)
T 3nra_A 158 VSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAE 237 (407)
T ss_dssp CSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGC
T ss_pred ccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhc
Confidence 889999999999999999998644321 11
Q ss_pred ---cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHH
Q 019543 141 ---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDN 213 (339)
Q Consensus 141 ---~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~ 213 (339)
..+.++++.|+||.++.+| ...|+++++ +++++.++.....++...++...+++...++ .++.++++.+++
T Consensus 238 ~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 315 (407)
T 3nra_A 238 AAVDAENVVTIMGPSKTESLSG-YRLGVAFGS-RAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAI 315 (407)
T ss_dssp TTSCGGGEEEEECSSSTTCCGG-GCCEEEEEC-HHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHH
T ss_pred CcccCCcEEEEeCcccccCCCe-eeEEEEEcC-HHHHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 1345699999999998655 445788776 5788888877766666667766555544443 356777778888
Q ss_pred HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCC-cceeecccCCcccceecc
Q 019543 214 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTK-YFSITVSFGSVKSLISMP 291 (339)
Q Consensus 214 a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p 291 (339)
.+++.+.|++++++..+ .| ..+..+++.+.. .....++.+.|. ..|+.++.|..+. +
T Consensus 316 ~~~l~~~L~~~~~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~ 374 (407)
T 3nra_A 316 RDELLHVLRGCEGVFAR-TP----------------QAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFS----P 374 (407)
T ss_dssp HHHHHHHHHTSTTCBCC-CC----------------SBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTC----T
T ss_pred HHHHHHHHhcCCCceec-cC----------------CeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhC----C
Confidence 99999999988765421 11 123456666643 234556777774 4688887664321 1
Q ss_pred ccccCCCCCHHHHHhCCCCCCeEEEEeccC--CHHHHHHHHHHHHhc
Q 019543 292 CFMSHASIPVEVRQARGLTEDLVRISVGIE--DVNDLISDLDKALRT 336 (339)
Q Consensus 292 ~~~~h~~~~~~~~~~~g~~~~~lRisvg~e--~~~~li~~l~~al~~ 336 (339)
..++.+|||++.. +.+..++.|.+++++
T Consensus 375 -----------------~~~~~iRis~~~~~~~i~~~~~~l~~~~~~ 404 (407)
T 3nra_A 375 -----------------HTADSVRLNFSQDHEAAVAAARRIVTLVER 404 (407)
T ss_dssp -----------------TCTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred -----------------CCCCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 1357899999861 123334455555443
No 40
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.86 E-value=1.5e-20 Score=177.03 Aligned_cols=241 Identities=15% Similarity=0.084 Sum_probs=163.9
Q ss_pred CchHHHHHHHHHhHhCCC--e-EEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccc--hHHHHH----------------
Q 019543 54 NPTRDALESLLAKLDKAD--R-ALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGG--TDRLLS---------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~--~-~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~--~~~~~~---------------- 111 (339)
.+..+++++++++++|.+ + +++++||++|+.+++ .+++|||+|+++++.|++ ....+.
T Consensus 52 ~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 131 (386)
T 2dr1_A 52 RKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKA 131 (386)
T ss_dssp HHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHHHHHHHHHhCCceEEEecCCCCC
Confidence 567899999999999976 4 667788899998654 478999999999999877 332221
Q ss_pred ----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccc
Q 019543 112 ----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 156 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~ 156 (339)
++|.++|++||+++|+|++|+.+... +....+.|++++|+||+++
T Consensus 132 ~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~ 211 (386)
T 2dr1_A 132 VKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFG 211 (386)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTC
T ss_pred CCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEecccccc
Confidence 99999999999999999999877542 2223478999999999999
Q ss_pred cCCCceEEEEEEcChhHHHHHH----------------HHH-H-hcCCCCChHHHHHHHhchhh------HHHHHHHHHH
Q 019543 157 GHSDVMAGVLAVKGERLAKELY----------------FLQ-N-AEGSGLAPFDCWICLRGVKT------MALRVEKQQD 212 (339)
Q Consensus 157 g~~~~~gG~v~~~~~~l~~~l~----------------~~~-~-~~~~~~~~~~a~~~~~~l~~------~~~r~~~~~~ 212 (339)
++++ .|++++++ ++.+.++ ... . ......++...+.+...++. ++.+.++..+
T Consensus 212 ~~~g--~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~ 288 (386)
T 2dr1_A 212 VPPG--LAIGAFSE-RFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEK 288 (386)
T ss_dssp CCSS--CEEEEECH-HHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCc--eEEEEECH-HHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 7643 57888875 6666652 221 1 22334555444444434433 4556777788
Q ss_pred HHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccc
Q 019543 213 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPC 292 (339)
Q Consensus 213 ~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~ 292 (339)
+++++.+.|+++ +++. ..|. . ...+.+++|.+++.....++.+.|...|+.++.|.. +
T Consensus 289 ~~~~l~~~L~~~-g~~~-~~~~----~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~------~- 346 (386)
T 2dr1_A 289 RAKMVREGVREI-GLDI-LAEP----G---------HESPTITAVLTPPGIKGDEVYEAMRKRGFELAKGYG------S- 346 (386)
T ss_dssp HHHHHHHHHHHT-TCCB-SSCT----T---------CBCSSEEEEECCTTCCHHHHHHHHHHTTEECEECCG------G-
T ss_pred HHHHHHHHHHHc-CCee-CcCc----c---------ccCCceEEEEcCCCCCHHHHHHHHHHCCeEEecCcc------c-
Confidence 899999999876 5432 1110 0 014678889875333356777777666888775541 1
Q ss_pred cccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 293 FMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 293 ~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..++.+|||++...+++.++.+.++|+
T Consensus 347 ----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~ 373 (386)
T 2dr1_A 347 ----------------VKEKTFRIGHMGYMKFEDIQEMLDNLR 373 (386)
T ss_dssp ----------------GTTTEEEEECCSSCCHHHHHHHHHHHH
T ss_pred ----------------cCCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 034689999997544444444444443
No 41
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.86 E-value=6.8e-21 Score=181.47 Aligned_cols=250 Identities=18% Similarity=0.157 Sum_probs=168.2
Q ss_pred CchHHHHHHHHHhHhCC---CeEEEcCcHHHHHHHHH-Hh----cCCCCEEEEcCCCccchH----HHHH----------
Q 019543 54 NPTRDALESLLAKLDKA---DRALCFTSGMAALAAVT-HL----LGTGEEIVAGDDLYGGTD----RLLS---------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~---~~~l~~~sG~~A~~~il-~l----l~~GD~Vi~~~~~y~~~~----~~~~---------- 111 (339)
.+..+++++.+++++|. +++++++||++|+.+++ .+ +++||+|+++++.|++.. ....
T Consensus 71 ~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 150 (420)
T 1t3i_A 71 TDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQ 150 (420)
T ss_dssp HHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEec
Confidence 45678999999999998 67889999999998654 46 789999999999998842 2211
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccc
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSAT 152 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~s 152 (339)
++|.++|++||+++|+|++|+.|... +....+.|++++|+|
T Consensus 151 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~s 230 (420)
T 1t3i_A 151 LDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGH 230 (420)
T ss_dssp BCTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGG
T ss_pred cCCCCCcCHHHHHHhhCCCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehh
Confidence 99999999999999999999887543 223346899999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHh--------------------cCCCCChHHHHHHHh-chhh-----HHHH
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNA--------------------EGSGLAPFDCWICLR-GVKT-----MALR 206 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--------------------~~~~~~~~~a~~~~~-~l~~-----~~~r 206 (339)
|.++++| +|++++++ ++.+.++..... +..+.++..+++++. .++. ++..
T Consensus 231 K~~~~~g---~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~ 306 (420)
T 1t3i_A 231 KMCAPTG---IGFLYGKE-EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENI 306 (420)
T ss_dssp GTTSCTT---CEEEEECH-HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred hhcCCCc---eEEEEEch-HHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHH
Confidence 9777544 57888864 666655432210 112344444443322 2332 3556
Q ss_pred HHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCccc
Q 019543 207 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKS 286 (339)
Q Consensus 207 ~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s 286 (339)
.++..++++++.+.|+++++++. ..|.. + ..+.++++.|.+.+ ....++.+.|...|+.++.|..++
T Consensus 307 ~~~~~~~~~~l~~~L~~~~g~~~-~~~~~---~--------~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~~~ 373 (420)
T 1t3i_A 307 HNYEVELTHYLWQGLGQIPQLRL-YGPNP---K--------HGDRAALASFNVAG-LHASDVATMVDQDGIAIRSGHHCT 373 (420)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEE-ESCCG---G--------GSCBCSEEEEEETT-BCHHHHHHHHHTTTEECBCSCTTC
T ss_pred HHHHHHHHHHHHHHHHhCCCeEE-eCCCc---c--------ccccCCEEEEEECC-CCHHHHHHHHHHCCeEEeeccccc
Confidence 67778889999999998877653 22310 0 00246788888753 224567777777788887664221
Q ss_pred ceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 287 LISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 287 ~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.| .....|. ++.+|||++...+++.++.+.++|+
T Consensus 374 ---~~-----------~~~~~g~-~~~iRis~~~~~~~~~i~~~~~~l~ 407 (420)
T 1t3i_A 374 ---QP-----------LHRLFDA-SGSARASLYFYNTKEEIDLFLQSLQ 407 (420)
T ss_dssp ---HH-----------HHHHTTC-CCCEEEECCTTCCHHHHHHHHHHHH
T ss_pred ---hH-----------HHHhcCC-CCeEEEecCCCCCHHHHHHHHHHHH
Confidence 01 0011222 5789999998766666666666654
No 42
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.86 E-value=2.4e-20 Score=175.11 Aligned_cols=234 Identities=15% Similarity=0.144 Sum_probs=161.8
Q ss_pred CCCchHHHHHHHHHhHhCC---CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 52 SGNPTRDALESLLAKLDKA---DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g~---~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
+.++...+|++++++++|. +++++++||++|+.+++ .++++||+|+++.+.|.+....+.
T Consensus 64 y~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 143 (367)
T 3euc_A 64 YPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFT 143 (367)
T ss_dssp SCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSC
T ss_pred CCCCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCC
Confidence 3446789999999999997 56777777899998654 578999999999988876543322
Q ss_pred ------------------------------------HHHHHHHHHc--CCEEEEeCCcCCCCCcCc---c-cCCCeEEEe
Q 019543 112 ------------------------------------RKIAEMAHAH--GALLLVDNSIMSPVLSRP---L-ELGADIVMH 149 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~--g~~livD~a~a~g~~~~~---~-~~~~Di~~~ 149 (339)
++|+++|++| |+++|+|++|+....... . ..+.++++.
T Consensus 144 ~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~ 223 (367)
T 3euc_A 144 LDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMR 223 (367)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEE
T ss_pred CCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEe
Confidence 7888999999 999999999975332211 1 234569999
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCC
Q 019543 150 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPR 226 (339)
Q Consensus 150 S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~ 226 (339)
|+||+ +.+| ...|+++++ +++.+.++.... ....++...+.+...|+. +..+.++..++.+++.+.|+++|+
T Consensus 224 s~sK~-~~~G-~r~G~~~~~-~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 298 (367)
T 3euc_A 224 TVSKL-GLAG-IRLGYVAGD-PQWLEQLDKVRP--PYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGG 298 (367)
T ss_dssp ECCCT-TSCS-CCEEEEEEC-HHHHHHHGGGCC--SSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred cchhh-cccc-cCceeeeeC-HHHHHHHHHhCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999 6554 557888886 467666654332 344566655555444433 566777788889999999999887
Q ss_pred ceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHh
Q 019543 227 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 306 (339)
Q Consensus 227 i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~ 306 (339)
++ + +|. .+.++++.+. ...++.+.|+..|+.++.|..+. +
T Consensus 299 ~~-~-~~~----------------~~~~~~~~~~---~~~~l~~~l~~~gi~v~~~~~~~----~--------------- 338 (367)
T 3euc_A 299 VT-V-FPS----------------AANFLLARVP---DAAQTFDRLLARKVLIKNVSKMH----P--------------- 338 (367)
T ss_dssp CE-E-CCC----------------SSSEEEEECS---CHHHHHHHHHTTTEECEECGGGC----G---------------
T ss_pred cE-E-CCC----------------CCeEEEEECC---CHHHHHHHHHHCCeEEEECCccC----C---------------
Confidence 75 2 331 4567778776 34566777777888887654321 1
Q ss_pred CCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 307 RGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 307 ~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..++.+|||++. ++.++.+.++|+
T Consensus 339 --~~~~~iRis~~~---~~~i~~~~~~l~ 362 (367)
T 3euc_A 339 --LLANCLRVTVST---PEENAQFLEAFA 362 (367)
T ss_dssp --GGTTEEEEECCC---HHHHHHHHHHHH
T ss_pred --CCCCEEEEecCC---HHHHHHHHHHHH
Confidence 135789999983 333445555544
No 43
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.85 E-value=5.4e-20 Score=173.76 Aligned_cols=253 Identities=17% Similarity=0.160 Sum_probs=167.6
Q ss_pred CCcccCCCCchHHHHHHHHHhHhC----CCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH---------
Q 019543 46 PYDYTRSGNPTRDALESLLAKLDK----ADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS--------- 111 (339)
Q Consensus 46 ~~~y~r~~~~~~~~le~~la~~~g----~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~--------- 111 (339)
.+.|+....+..+++.+.+++.+| .+.++++++|++|+.++ ..++++||+|+++.+.|.+....+.
T Consensus 57 ~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~ 136 (391)
T 3dzz_A 57 AFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISS 136 (391)
T ss_dssp CCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEEC
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEe
Confidence 345554444566777777777776 45788888889999854 4578999999999998876653322
Q ss_pred ----------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-----Ccc
Q 019543 112 ----------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-----RPL 140 (339)
Q Consensus 112 ----------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-----~~~ 140 (339)
++|+++|++||+++|+|++|+.+... ...
T Consensus 137 ~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~ 216 (391)
T 3dzz_A 137 DLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAF 216 (391)
T ss_dssp CCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGG
T ss_pred eeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehh
Confidence 88999999999999999999754331 111
Q ss_pred cCC---Ce--EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC-CCCChHHHHHHHhchhh----HHHHHHHH
Q 019543 141 ELG---AD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPFDCWICLRGVKT----MALRVEKQ 210 (339)
Q Consensus 141 ~~~---~D--i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~-~~~~~~~a~~~~~~l~~----~~~r~~~~ 210 (339)
... .| +++.|+||+++.+| ...|+++++++++.+.++......+ ...++...+.+...++. ++.+.++.
T Consensus 217 ~~~~~~~d~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 295 (391)
T 3dzz_A 217 TVDWDAKNWVVSLISPSKTFNLAA-LHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVL 295 (391)
T ss_dssp GSCTTTGGGEEEEECSHHHHTCTT-TCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred hcCccccCcEEEEEeChhhccccc-hhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 222 45 99999999997555 4567888875678888877654333 34455444433333332 56667777
Q ss_pred HHHHHHHHHHHhC-CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccC-CcceeecccCCcccc
Q 019543 211 QDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETT-KYFSITVSFGSVKSL 287 (339)
Q Consensus 211 ~~~a~~l~~~L~~-~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L-~~~~i~v~~G~~~s~ 287 (339)
.++.+++.+.|++ +|++.. ..|. .+.++++.+... ....++.+.| +..|+.++.|..+..
T Consensus 296 ~~~~~~l~~~l~~~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~ 358 (391)
T 3dzz_A 296 RDNFAYAREFLAKEVPEVKV-LDSN----------------ASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRG 358 (391)
T ss_dssp HHHHHHHHHHHHHHCTTSEE-CCCC----------------BSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCT
T ss_pred HHHHHHHHHHHHhhCCCcEE-eccC----------------ceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCC
Confidence 8889999999988 777642 2221 233455665421 2356778887 478998886653211
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEecc--CCHHHHHHHHHHHHhcC
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 337 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~--e~~~~li~~l~~al~~~ 337 (339)
..++.+|||++. ++.++.++.|.++++++
T Consensus 359 ---------------------~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 359 ---------------------NGHEFVRINLACPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp ---------------------TGGGEEEEECCSCHHHHHHHHHHHHHHHHTC
T ss_pred ---------------------CCCCEEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 024789999994 22344456666666554
No 44
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.85 E-value=5e-20 Score=174.66 Aligned_cols=262 Identities=17% Similarity=0.142 Sum_probs=178.3
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh-------cCCCCEEEEcCCCccchHHHHH-------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL-------LGTGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l-------l~~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
.++..+++|+.+++++|.+++++++||++|+..++ .+ +++||+|+++.+.|.+....+.
T Consensus 32 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~ 111 (390)
T 3b8x_A 32 MGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDI 111 (390)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT
T ss_pred CChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCc
Confidence 46789999999999999999999999999998544 46 7899999999998877654332
Q ss_pred ---------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCC--eEEEecc--ccc
Q 019543 112 ---------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGA--DIVMHSA--TKF 154 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~--Di~~~S~--sK~ 154 (339)
++|.++|++||+++|+|++|+.|...+....+. |+.++|+ +|.
T Consensus 112 ~~~~~d~~~l~~~i~~~~~~v~~~~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~~s~~~~k~ 191 (390)
T 3b8x_A 112 NTLNIDIESLKEAVTDSTKAILTVNLLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNKCAGTFGLMGTFSSFYSNH 191 (390)
T ss_dssp TTCSBCHHHHHHHCCTTEEEEEEECGGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred cccCcCHHHHHHHhCcCCeEEEEECCccChhhHHHHHHHHHHcCCEEEEECcCcccCEECCcccccccceEEEEccCCCC
Confidence 999999999999999999999876544333444 5655553 455
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHh-----------------------------cC--CCCChHHHHHHHhchhhH
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNA-----------------------------EG--SGLAPFDCWICLRGVKTM 203 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~-----------------------------~~--~~~~~~~a~~~~~~l~~~ 203 (339)
+++ ..||+++++++.+.++++..+.. .| ..+++..+++++.+++.+
T Consensus 192 ~~~---g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l 268 (390)
T 3b8x_A 192 IAT---MEGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKL 268 (390)
T ss_dssp SCS---SSCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHH
T ss_pred Ccc---CCceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHHHHH
Confidence 542 24789998875666666554310 01 226788888887778888
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--HHHHHHHHccCCcceeeccc
Q 019543 204 ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSF 281 (339)
Q Consensus 204 ~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--~~~~~~~~~~L~~~~i~v~~ 281 (339)
+++.++++++++++.+.|+++++++. +..+. .+...++++.+.+ .....++.+.|+..||.++.
T Consensus 269 ~~~~~~~~~~~~~l~~~L~~~~~~~~---~~~~~-----------~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~ 334 (390)
T 3b8x_A 269 PRFISVRRKNAEYFLDKFKDHPYLDV---QQETG-----------ESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECRP 334 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSEEE---CCCCS-----------BCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCccc---CCCCC-----------CcccEEEEEEecCcCcccHHHHHHHHHHCCCCeee
Confidence 88899999999999999998887642 21110 1122346666652 11345677777777888775
Q ss_pred CCcccceec-cccc--cC---CCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 282 GSVKSLISM-PCFM--SH---ASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 282 G~~~s~~~~-p~~~--~h---~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+...+.... |... .| ..++.... +..+.|||+++...+++.++.+.++|+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~l~~~~~~t~~di~~i~~~l~ 390 (390)
T 3b8x_A 335 IVTGNFLKNTDVLKYFDYTVHNNVDNAEY----LDKNGLFVGNHQIELFDEIDYLREVLK 390 (390)
T ss_dssp STTSSGGGCHHHHTTCEEEESSCCHHHHH----HHHHEEEEECCSSCCHHHHHHHHHHTC
T ss_pred ecCCchhhcchhhhcCCCCCcCCChHHHH----HhcCEEEeeCCCCCCHHHHHHHHHhhC
Confidence 321122122 2210 01 12221111 123579999999999999999988874
No 45
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.85 E-value=8.7e-20 Score=171.06 Aligned_cols=235 Identities=16% Similarity=0.144 Sum_probs=166.2
Q ss_pred CCCchHHHHHHHHHhHhC--CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 52 SGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g--~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
+.++...+|++++++++| .+++++++||++|+.+++ .+++|||+|+++.+.|.+....+.
T Consensus 62 y~~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~ 141 (360)
T 3hdo_A 62 YPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRI 141 (360)
T ss_dssp CCCSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSB
T ss_pred CCCCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCH
Confidence 344556899999999998 457889999999998654 578999999999999988765443
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcc----cCCCeEEEeccccccccCCC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPL----ELGADIVMHSATKFIAGHSD 160 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~----~~~~Di~~~S~sK~l~g~~~ 160 (339)
++|.++|+++|+++|+|++|+........ ..+.+++++|+||+++.+|
T Consensus 142 ~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G- 220 (360)
T 3hdo_A 142 AGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAG- 220 (360)
T ss_dssp TTCCSSBCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTT-
T ss_pred HHHHhhcCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCc-
Confidence 89999999999999999999742111111 1245699999999998655
Q ss_pred ceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCC
Q 019543 161 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 237 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~ 237 (339)
...|+++++ +++.+.++.... ....++...+.+...|+ .++.+.++..++.+++.+.|+++ ++.. +|
T Consensus 221 ~r~G~~~~~-~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~--~~---- 290 (360)
T 3hdo_A 221 MRIGLAIAR-PEVIAALDKIRD--HYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYDV--IP---- 290 (360)
T ss_dssp SCCEEEECC-HHHHHHHHHHSC--SCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEE--CC----
T ss_pred cceeeEeeC-HHHHHHHHHhCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEE--cC----
Confidence 446788775 577777765542 34566766555544443 35667777788889999999877 5432 22
Q ss_pred CCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEE
Q 019543 238 HPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 317 (339)
Q Consensus 238 ~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRis 317 (339)
+.+..+++.+.+. ...++.+.|...|+.++.|.. + -.++.+|||
T Consensus 291 ------------~~~~~~~~~~~~~-~~~~l~~~l~~~gi~v~~~~~------~-----------------~~~~~iRis 334 (360)
T 3hdo_A 291 ------------SQGNYLFATPPDR-DGKRVYDGLYARKVLVRHFSD------P-----------------LLAHGMRIS 334 (360)
T ss_dssp ------------CSSSEEEEECTTC-CHHHHHHHHHHTTEECBCCCS------T-----------------TTTTSEEEE
T ss_pred ------------CCccEEEEECCCC-CHHHHHHHHHHCCEEEEECCC------C-----------------CCCCEEEEE
Confidence 1456778876532 345677777777888775432 1 034789999
Q ss_pred eccCCHHHHHHHHHHHHhc
Q 019543 318 VGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 318 vg~e~~~~li~~l~~al~~ 336 (339)
++ .++.++.|.++|++
T Consensus 335 ~~---~~~e~~~l~~al~~ 350 (360)
T 3hdo_A 335 IG---TREEMEQTLAALKE 350 (360)
T ss_dssp CC---CHHHHHHHHHHHHH
T ss_pred cC---CHHHHHHHHHHHHH
Confidence 98 34555667777664
No 46
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.85 E-value=1.8e-19 Score=169.73 Aligned_cols=249 Identities=15% Similarity=0.185 Sum_probs=168.0
Q ss_pred CCcccCCCCchHHHHHHHHHhHhC----CCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH---------
Q 019543 46 PYDYTRSGNPTRDALESLLAKLDK----ADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS--------- 111 (339)
Q Consensus 46 ~~~y~r~~~~~~~~le~~la~~~g----~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~--------- 111 (339)
.+.|+....+..+++++.+++.+| .+++++++||++|+.++ ..++++||+|+++.+.|.+....+.
T Consensus 54 ~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~ 133 (383)
T 3kax_A 54 IFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVS 133 (383)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEec
Confidence 345665567788999999999887 35788888999999854 4578999999999998876653322
Q ss_pred ---------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc-c
Q 019543 112 ---------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL-E 141 (339)
Q Consensus 112 ---------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~-~ 141 (339)
++|+++|++||+++|+|++|+...... .+ .
T Consensus 134 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 213 (383)
T 3kax_A 134 PLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFAS 213 (383)
T ss_dssp CCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG
T ss_pred cceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhh
Confidence 778888999999999999997643311 11 1
Q ss_pred C-----CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCC-CCChHHHHHHHhchhh----HHHHHHHHH
Q 019543 142 L-----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS-GLAPFDCWICLRGVKT----MALRVEKQQ 211 (339)
Q Consensus 142 ~-----~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~-~~~~~~a~~~~~~l~~----~~~r~~~~~ 211 (339)
. +.++++.|+||.++.+| ...|+++++++++.+.++......+. ..++...+.+...++. ++.+.++.+
T Consensus 214 ~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 292 (383)
T 3kax_A 214 LSEELAARTITCMAPSKTFNIAG-LQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIE 292 (383)
T ss_dssp SCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred cCccccCcEEEEEEChhhccCcc-hhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 1 34599999999998555 45678877656788888777655443 5666655544444433 556667778
Q ss_pred HHHHHHHHHHhC-CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCC-cceeecccCCcccce
Q 019543 212 DNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTK-YFSITVSFGSVKSLI 288 (339)
Q Consensus 212 ~~a~~l~~~L~~-~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~-~~~i~v~~G~~~s~~ 288 (339)
++.+++.+.|++ +|++..+ .|. .+.++++.+... ....++.+.|. ..|+.++.|..+..
T Consensus 293 ~~~~~l~~~l~~~~~~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~- 354 (383)
T 3kax_A 293 DNAKFACEYIKDHIPTLSVM-KPE----------------GSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGL- 354 (383)
T ss_dssp HHHHHHHHHHHHHCTTCEEC-CCS----------------BSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCT-
T ss_pred HHHHHHHHHHHhhCCCceEe-cCC----------------ceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcC-
Confidence 888999999987 6776432 120 233444666421 23567777775 67898886643210
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..++.+|||++. +++.++.+.++|+
T Consensus 355 --------------------~~~~~iRi~~~~--~~~~i~~~l~~l~ 379 (383)
T 3kax_A 355 --------------------GGEEHIGINIGC--PRSVLEEILNRLR 379 (383)
T ss_dssp --------------------TCTTEEEEECSS--CHHHHHHHHHHHH
T ss_pred --------------------CCCCeEEEEEcC--CHHHHHHHHHHHH
Confidence 135789999995 3343444444443
No 47
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.85 E-value=1.2e-19 Score=171.38 Aligned_cols=249 Identities=11% Similarity=0.139 Sum_probs=165.6
Q ss_pred CCcccCCCCchHHHHHHHHHhHhC----CCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH---------
Q 019543 46 PYDYTRSGNPTRDALESLLAKLDK----ADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS--------- 111 (339)
Q Consensus 46 ~~~y~r~~~~~~~~le~~la~~~g----~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~--------- 111 (339)
.+.|+....+..+++++.+++++| .+++++++||++|+.++ ..++++||+|+++.+.|.+....+.
T Consensus 62 ~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~ 141 (391)
T 4dq6_A 62 IYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIIS 141 (391)
T ss_dssp CCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEee
Confidence 355666556778889999998887 45788899999999854 4578999999999987765432111
Q ss_pred ---------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C---cc-c
Q 019543 112 ---------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R---PL-E 141 (339)
Q Consensus 112 ---------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~---~~-~ 141 (339)
++|+++|++||+++|+|++|+..... . ++ .
T Consensus 142 ~~~~~~~~~~~~d~~~l~~~l~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 221 (391)
T 4dq6_A 142 PLQKLENGNYIMDYEDIENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMAS 221 (391)
T ss_dssp CCEECTTSCEECCHHHHHHHCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGG
T ss_pred eeeecCCCceEeeHHHHHHHhhcCCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHH
Confidence 88999999999999999999764331 1 11 1
Q ss_pred C-----CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC-CCCChHHHHHHHhchhh----HHHHHHHHH
Q 019543 142 L-----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPFDCWICLRGVKT----MALRVEKQQ 211 (339)
Q Consensus 142 ~-----~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~-~~~~~~~a~~~~~~l~~----~~~r~~~~~ 211 (339)
. +..+++.|+||.++.+| ...|+++++++++.+.++......+ ...++...+.+...++. ++.+.++.+
T Consensus 222 ~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 300 (391)
T 4dq6_A 222 ISKEFEKNTITCMAPTKTFNIAG-LQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLE 300 (391)
T ss_dssp SCHHHHHTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred cCccccCcEEEEEechhhccCcc-cceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 2 22389999999997655 4567888876578888877655443 35566554444443332 556677777
Q ss_pred HHHHHHHHHHhC-CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCCcc-eeecccCCcccce
Q 019543 212 DNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYF-SITVSFGSVKSLI 288 (339)
Q Consensus 212 ~~a~~l~~~L~~-~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~~~-~i~v~~G~~~s~~ 288 (339)
++.+++.+.|++ +|++..+ .| ..+.++++.+.. .....++.+.|... |+.++.|..+..
T Consensus 301 ~~~~~l~~~l~~~~~~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~- 362 (391)
T 4dq6_A 301 SNIDFAIKYINENMPKLKVR-KP----------------EGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGI- 362 (391)
T ss_dssp HHHHHHHHHHHHHCTTSEEC-CC----------------SBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCT-
T ss_pred HHHHHHHHHHHhhCCCCEec-CC----------------CccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCC-
Confidence 888899999987 6776432 11 023344566642 12345677777665 888876643210
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..++.+|||++. +++.++.+.++|+
T Consensus 363 --------------------~~~~~iRis~~~--~~~~i~~~l~~l~ 387 (391)
T 4dq6_A 363 --------------------GGSGYQRINLAC--PRSMLEEALIRIK 387 (391)
T ss_dssp --------------------TCTTEEEEECCS--CHHHHHHHHHHHH
T ss_pred --------------------CCCCeEEEEEcC--CHHHHHHHHHHHH
Confidence 135789999994 3344444444443
No 48
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.84 E-value=3.4e-20 Score=177.22 Aligned_cols=254 Identities=18% Similarity=0.152 Sum_probs=161.9
Q ss_pred CCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHHH-hc----CCCCEEEEcCCCccchHHHH---H-----------
Q 019543 53 GNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVTH-LL----GTGEEIVAGDDLYGGTDRLL---S----------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il~-ll----~~GD~Vi~~~~~y~~~~~~~---~----------- 111 (339)
..+..+++++++++++|.+ ++++++||++|+.+++. +. +|||+|+++++.|++....+ .
T Consensus 66 ~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 145 (423)
T 3lvm_A 66 AEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAP 145 (423)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEecc
Confidence 3456789999999999987 78899999999985443 44 38999999999988764332 1
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEecccc
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATK 153 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK 153 (339)
++|.++|++||++||+|++|+.+.. ......+.|++++|+||
T Consensus 146 ~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK 225 (423)
T 3lvm_A 146 QRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHK 225 (423)
T ss_dssp CTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTT
T ss_pred CCCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHH
Confidence 8999999999999999999988755 23334578999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHH-------HhcCCCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHHHHHh
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQ-------NAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~-------~~~~~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~~L~ 222 (339)
.+++.+ .|++++++ +..+.+.... .......++...+.+...++. ++...++..++++++.+.|+
T Consensus 226 ~~g~~g---~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~ 301 (423)
T 3lvm_A 226 IYGPKG---IGALYVRR-KPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIK 301 (423)
T ss_dssp TTSCSS---CEEEEECB-TTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hcCCCC---eEEEEEec-cccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 877543 46777765 3333332211 011223344333322222222 35567777888999999999
Q ss_pred CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHH
Q 019543 223 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 302 (339)
Q Consensus 223 ~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~ 302 (339)
+++++..+..+. ...++++.|.+.+. ...++.+.|.. +.++.|..+...... +..
T Consensus 302 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~l~~~l~~--i~v~~g~~~~~~~~~--------~~~ 356 (423)
T 3lvm_A 302 DIEEVYLNGDLE--------------HGAPNILNVSFNYV-EGESLIMALKD--LAVSSGSACTSASLE--------PSY 356 (423)
T ss_dssp TSTTEEEESCST--------------TBCTTEEEEEETTS-CHHHHHHHTTT--EECBCCCC-----CC--------CCH
T ss_pred cCCCEEEeCCcc--------------ccCCCeEEEEeCCC-CHHHHHHHHhh--heeccCccccCCCcc--------ccH
Confidence 888875432111 11345777777432 34567777766 777766532221000 011
Q ss_pred HHHhCCCC----CCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 303 VRQARGLT----EDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 303 ~~~~~g~~----~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
....+|+. ++.|||+++...+++.++.+.++|+
T Consensus 357 ~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~ 393 (423)
T 3lvm_A 357 VLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVR 393 (423)
T ss_dssp HHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHH
T ss_pred HHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHH
Confidence 22234443 4789999997665555555555544
No 49
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.84 E-value=1.7e-19 Score=173.84 Aligned_cols=268 Identities=14% Similarity=0.047 Sum_probs=177.5
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh---------cCCCCEEEEcCCCccchHHHHH-----------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL---------LGTGEEIVAGDDLYGGTDRLLS----------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l---------l~~GD~Vi~~~~~y~~~~~~~~----------- 111 (339)
.++..+++|+.+++++|.+++++++||++|+.+++ .+ +++||+|+++.+.|.+....+.
T Consensus 60 ~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~ 139 (437)
T 3bb8_A 60 TGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDV 139 (437)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCE
T ss_pred CChHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEec
Confidence 45789999999999999999999999999997544 45 7899999999998877654332
Q ss_pred -----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCC--CeEEEeccccc
Q 019543 112 -----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSATKF 154 (339)
Q Consensus 112 -----------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~--~Di~~~S~sK~ 154 (339)
++|.++|++||+++|+|++|+.|...+....+ .|+++.||+|.
T Consensus 140 ~~~~~~~d~~~l~~~i~~~~~~v~~~~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~s~~~~ 219 (437)
T 3bb8_A 140 DIPTYNVNASLIEAAVSDKTKAIMIAHTLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFGDIGTVSFYPA 219 (437)
T ss_dssp ETTTTEECGGGHHHHCCTTEEEEEEECGGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECSTT
T ss_pred cCccCCcCHHHHHHhcCCCCeEEEEeCCCCChhcHHHHHHHHHHcCCEEEEECccccCceECCeecccccCEEEEECcCC
Confidence 99999999999999999999877543332233 69999988655
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHh-------------------------------------c--CCCCChHHHHH
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNA-------------------------------------E--GSGLAPFDCWI 195 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~-------------------------------------~--~~~~~~~~a~~ 195 (339)
.+.++ ..||+++++++.+.+.++..+.. . +..++++.+++
T Consensus 220 k~l~~-g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~ 298 (437)
T 3bb8_A 220 KHITM-GEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAAC 298 (437)
T ss_dssp SSSCC-SSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHH
T ss_pred cCCCC-CCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHH
Confidence 44333 35889998865444443332210 0 11345777777
Q ss_pred HHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccCC
Q 019543 196 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTK 273 (339)
Q Consensus 196 ~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L~ 273 (339)
++..++.++.+.++++++++++.+.|++++++.. +|..+... ......+.+.+... ....++.+.|.
T Consensus 299 ~l~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~--~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~L~ 367 (437)
T 3bb8_A 299 GLAQLERIEEFVEKRKANFKYLKDALQSCADFIE--LPEATENS---------DPSWFGFPITLKEDSGVSRIDLVKFLD 367 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGTTTEE--CCCCCTTE---------ECCCSSEEEEECGGGSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccc--cCCCCCCC---------ceeeEEEEEEECCcCcCcHHHHHHHHH
Confidence 7777888888888888999999999998876532 33211000 00112333333211 13456777787
Q ss_pred cceeecccCCcccceecccccc-----CCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 274 YFSITVSFGSVKSLISMPCFMS-----HASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 274 ~~~i~v~~G~~~s~~~~p~~~~-----h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..||.++.+...+....|.... ...++...+ +..+.|||+++...+++.++.+.++|++
T Consensus 368 ~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~lrl~~~~~~t~~di~~i~~~l~~ 431 (437)
T 3bb8_A 368 EAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDR----IMNQTFWIGIYPGLTHDHLDYVVSKFEE 431 (437)
T ss_dssp HTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHH----HHHHEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred HCCCceeccCCcccccCchhhccCccccCCCcHHHH----HhcCEEEecCCCCCCHHHHHHHHHHHHH
Confidence 7899888664322212222100 011221111 1235799999999988888998888875
No 50
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.84 E-value=2.4e-19 Score=167.65 Aligned_cols=238 Identities=12% Similarity=0.089 Sum_probs=164.0
Q ss_pred CCchHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.++...+++++++++++. +++++++||++|+.+++..+ |+|+++.+.|.+....+.
T Consensus 59 ~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~---d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 135 (361)
T 3ftb_A 59 PDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF---EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDY 135 (361)
T ss_dssp CCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC---SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCH
T ss_pred CCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc---CcEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCH
Confidence 456678999999999985 46778888899998777655 999999998887654332
Q ss_pred -------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc---Cccc----CCCeEEEecccc
Q 019543 112 -------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS---RPLE----LGADIVMHSATK 153 (339)
Q Consensus 112 -------------------------------~~I~~la~~~g~~livD~a~a~g~~~---~~~~----~~~Di~~~S~sK 153 (339)
++|+++|++||+++|+|++|+..... .... .+.+++++|+||
T Consensus 136 ~~l~~~l~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 215 (361)
T 3ftb_A 136 EDIISKIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTK 215 (361)
T ss_dssp HHHHHHTTTCSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSS
T ss_pred HHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChh
Confidence 78899999999999999999754331 1111 233588999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCCCceEE
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKV 230 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~~i~~v 230 (339)
.++.+| ...|++++.++++.+.++.... ....++...+.+...++ .++.+.++..++.+++.+.|+++|++..+
T Consensus 216 ~~~~~G-~r~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 292 (361)
T 3ftb_A 216 FFAMPG-IRFGYGITNNKEIAAKIKAKQN--PWNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRV 292 (361)
T ss_dssp TTSCGG-GCCEEEEESCHHHHHHHHTTSC--TTCSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEE
T ss_pred hcCCCC-cceeEEEeCCHHHHHHHHhhCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCcee
Confidence 998655 4457777445677777665432 34566666665555554 34566777788899999999988876523
Q ss_pred ecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCC
Q 019543 231 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 310 (339)
Q Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~ 310 (339)
..| .++++++.+.+ ....++.+.|...|+.++.|..+. +..
T Consensus 293 ~~~-----------------~~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~g~~~~---------------------~~~ 333 (361)
T 3ftb_A 293 FSP-----------------HANFVLCRLEN-ISGEKLYDSLLKEDIVIRRCCNFI---------------------GLD 333 (361)
T ss_dssp ECC-----------------SSSEEEEEESS-SCHHHHHHHHHTTTEECEECTTST---------------------TCC
T ss_pred cCC-----------------CCeEEEEEcCC-CCHHHHHHHHHHCCeEEeeCccCC---------------------CCC
Confidence 322 45678888754 234567777766688887664321 024
Q ss_pred CCeEEEEeccCCH-HHHHHHHHHHHh
Q 019543 311 EDLVRISVGIEDV-NDLISDLDKALR 335 (339)
Q Consensus 311 ~~~lRisvg~e~~-~~li~~l~~al~ 335 (339)
++.+|+|++.++. +++++.|.+.++
T Consensus 334 ~~~iRis~~~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 334 DSFVRFAIKDEKKNTKFLRALKGVEN 359 (361)
T ss_dssp TTEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 5789999995432 445555544443
No 51
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.84 E-value=6e-20 Score=174.56 Aligned_cols=255 Identities=16% Similarity=0.080 Sum_probs=169.1
Q ss_pred CcccCCCCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHHH-h---cCCCCEEEEcCCCccchHHHH-------H--
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVTH-L---LGTGEEIVAGDDLYGGTDRLL-------S-- 111 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il~-l---l~~GD~Vi~~~~~y~~~~~~~-------~-- 111 (339)
|.|++...+..+++++.+++++|.+ .++++++|++|+.+++. + +++||+|+++++.|++....+ .
T Consensus 61 ~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~ 140 (406)
T 3cai_A 61 HPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAK 140 (406)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCE
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCe
Confidence 3343334567899999999999975 57777777888876554 5 789999999999887643211 0
Q ss_pred --------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeE
Q 019543 112 --------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADI 146 (339)
Q Consensus 112 --------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di 146 (339)
++|.++|++||+++|+|++|+.|... +....+.|+
T Consensus 141 v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~ 220 (406)
T 3cai_A 141 VKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADV 220 (406)
T ss_dssp EEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSE
T ss_pred EEEEecCcccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCCE
Confidence 99999999999999999999877542 222347899
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHHHHH---------hcCCCCChHHHHH---HHhchh-------------
Q 019543 147 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN---------AEGSGLAPFDCWI---CLRGVK------------- 201 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~---------~~~~~~~~~~a~~---~~~~l~------------- 201 (339)
+++|+||+++ ++ .||++++++ ++.+.++.... ......++...+. ++..++
T Consensus 221 ~~~s~~K~~g-~~--~G~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 296 (406)
T 3cai_A 221 VTVNAHAWGG-PP--IGAMVFRDP-SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRER 296 (406)
T ss_dssp EEEEGGGGTS-CS--CEEEEESCH-HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHH
T ss_pred EEeehhhhcC-CC--cCeEEEEeh-HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhh
Confidence 9999999876 32 343888764 56555543211 1122334332221 222222
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceee
Q 019543 202 ---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSIT 278 (339)
Q Consensus 202 ---~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~ 278 (339)
.++...++..++++++.+.|+++++++ +..|. ...+++++|.+.+. ...++.+.|...|+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~L~~~gi~ 360 (406)
T 3cai_A 297 LAVSMQSADAYLNRVFDYLMVSLRSLPLVM-LIGRP--------------EAQIPVVSFAVHKV-PADRVVQRLADNGIL 360 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCTTEE-ECCCC--------------SSBCSEEEEEETTB-CHHHHHHHHHHTTEE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcCCCeE-EcCCc--------------cccCCEEEEEECCc-CHHHHHHHHHHCCcE
Confidence 245556667788999999999887764 22221 11356888887532 245677777677888
Q ss_pred cccCCcccceeccccccCCCCCHHHHHhCCCC--CCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 279 VSFGSVKSLISMPCFMSHASIPVEVRQARGLT--EDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 279 v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~--~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
++.|..... ...+|.. .+.+|||++..++++.++.+.++|+++
T Consensus 361 v~~g~~~~~----------------~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 361 AIANTGSRV----------------LDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp CEECCSCHH----------------HHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred EecCChHHH----------------HHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 876641110 0122332 478999999988888889999998764
No 52
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.84 E-value=2.4e-20 Score=174.41 Aligned_cols=211 Identities=13% Similarity=0.068 Sum_probs=147.1
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCC--EEEEcCCCccchH----------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGE--EIVAGDDLYGGTD---------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD--~Vi~~~~~y~~~~---------------------- 107 (339)
.++...+||+++++++|.+..++++||++|+.+ +..++.+|| +|+++++.+....
T Consensus 45 ~~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 124 (357)
T 3lws_A 45 TGAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGAADRL 124 (357)
T ss_dssp EETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSCTTSC
T ss_pred CChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccCcEEEEecCCCCC
Confidence 357899999999999999999999999999875 445778888 7777654322110
Q ss_pred ---HHHH---------------------------HHHHHHHHHcCCEEEEeCCcCC---CCCcC---cccCCCeEEEecc
Q 019543 108 ---RLLS---------------------------RKIAEMAHAHGALLLVDNSIMS---PVLSR---PLELGADIVMHSA 151 (339)
Q Consensus 108 ---~~~~---------------------------~~I~~la~~~g~~livD~a~a~---g~~~~---~~~~~~Di~~~S~ 151 (339)
..+. ++|+++|++||++||+|++|.. +..+. .+....|+++.|+
T Consensus 125 ~d~~~l~~~~~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~ 204 (357)
T 3lws_A 125 MTLDEIKALPDIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISF 204 (357)
T ss_dssp CCHHHHHTCCSCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEES
T ss_pred cCHHHHhcCcCcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEec
Confidence 0000 8899999999999999999862 11111 1223578999999
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCC--ChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 152 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 152 sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~--~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
||+++++. ||+++++ +++++.++..+..++..+ ....+..+..+++...+++++..++++++.+.|+++++++.
T Consensus 205 sK~~~~~~---gg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 280 (357)
T 3lws_A 205 YKGLGGIA---GAILAGP-AAFCQTARIWKRRYGGDLISLYPYIVSADYYYELRKDRMGQYYEQAKQLAEQFNALPGVHT 280 (357)
T ss_dssp SSTTCCSS---CEEEEEC-HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred cccCCCCc---eEEEEcC-HHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence 99997653 4788776 478888877665554332 23333344455666555666677888999999999988754
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccCCcceeecccCC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGS 283 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L~~~~i~v~~G~ 283 (339)
...|. .+.++++.+.+. ....++.+.|.+.|+.++.|.
T Consensus 281 ~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~ 320 (357)
T 3lws_A 281 TPEVP----------------VSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYL 320 (357)
T ss_dssp ESSSC----------------SSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCC
T ss_pred ccCCC----------------cceEEEEEecCChHHHHHHHHHHHHhcCeEEeccc
Confidence 33332 467888887432 335677788888899888663
No 53
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.84 E-value=1.7e-19 Score=170.80 Aligned_cols=247 Identities=18% Similarity=0.183 Sum_probs=164.4
Q ss_pred CchHHHHHHHHHhHhCC---CeEEEcCcHHHHHHHHH-Hh----cCCCCEEEEcCCCccchHHH----HH----------
Q 019543 54 NPTRDALESLLAKLDKA---DRALCFTSGMAALAAVT-HL----LGTGEEIVAGDDLYGGTDRL----LS---------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~---~~~l~~~sG~~A~~~il-~l----l~~GD~Vi~~~~~y~~~~~~----~~---------- 111 (339)
.+..+++++++++++|. +.+++++||++|+.+++ .+ +++||+|+++++.|++.... ..
T Consensus 66 ~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 145 (406)
T 1kmj_A 66 TEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIP 145 (406)
T ss_dssp HHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEe
Confidence 45678999999999998 46778888899998654 46 78999999999998765321 11
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccc
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSAT 152 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~s 152 (339)
++|.++|++||+++|+|++|+.|... +....+.|++++|+|
T Consensus 146 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~ 225 (406)
T 1kmj_A 146 LNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGH 225 (406)
T ss_dssp BCTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGG
T ss_pred cCCCCCcCHHHHHHHhccCCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEch
Confidence 99999999999999999999877542 212346899999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHH---------------------hcCCCCChHHHHHHH-hchhh-----HHH
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQN---------------------AEGSGLAPFDCWICL-RGVKT-----MAL 205 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~---------------------~~~~~~~~~~a~~~~-~~l~~-----~~~ 205 (339)
|.++++| .|+++++ +++.+.++.... .+..+.++..+++++ ..++. ++.
T Consensus 226 K~~g~~G---~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~ 301 (406)
T 1kmj_A 226 KLYGPTG---IGILYVK-EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNN 301 (406)
T ss_dssp GTTSCTT---CEEEEEC-HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred hccCCCC---cEEEEEe-HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHH
Confidence 9996544 4788886 466666543220 111223444333322 23332 335
Q ss_pred HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcc
Q 019543 206 RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVK 285 (339)
Q Consensus 206 r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~ 285 (339)
..++..++++++.+.|+++++++.+ .|. +.++++.|.+.+. ...++.+.|...|+.++.|...
T Consensus 302 ~~~~~~~~~~~l~~~L~~~~~~~~~-~~~---------------~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~ 364 (406)
T 1kmj_A 302 IAEYEQNLMHYALSQLESVPDLTLY-GPQ---------------NRLGVIAFNLGKH-HAYDVGSFLDNYGIAVRTGHHC 364 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTEEEE-SCT---------------TCCSEEEEEETTC-CHHHHHHHHHHTTEECEEECTT
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEe-cCC---------------CcCCEEEEEECCC-CHHHHHHHHhhCCcEEEecccc
Confidence 5666778889999999988776532 221 1467888877532 2345667777778887765421
Q ss_pred cceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 286 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 286 s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+ .| ....+|. ++.+|||++..++++.++.+.++|++
T Consensus 365 ~---~~-----------~~~~~g~-~~~iRis~~~~~t~~~i~~~~~~l~~ 400 (406)
T 1kmj_A 365 A---MP-----------LMAYYNV-PAMCRASLAMYNTHEEVDRLVTGLQR 400 (406)
T ss_dssp C---HH-----------HHHHTTC-SCEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred c---hH-----------HHHhcCC-CCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 1 01 0112232 47899999987666666666666653
No 54
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.84 E-value=5.8e-19 Score=167.70 Aligned_cols=240 Identities=18% Similarity=0.144 Sum_probs=166.0
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-h--cCCCCEEEEcCCCccchHHHHH------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-L--LGTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-l--l~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
..+..+++++++++++|.++.++++||++++.+++. + ..|||+|+++.+.|++....++
T Consensus 89 ~~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~le 168 (401)
T 2bwn_A 89 TTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLR 168 (401)
T ss_dssp CBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTTCHHHHH
T ss_pred ChHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCCCHHHHH
Confidence 346789999999999999999999999887765544 3 3699999999988876542221
Q ss_pred -----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---cc----c--CCCeEEEecccc
Q 019543 112 -----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---PL----E--LGADIVMHSATK 153 (339)
Q Consensus 112 -----------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~~----~--~~~Di~~~S~sK 153 (339)
++|.++|++||+++|+|++|+.|.++. .. . ...|++++|+||
T Consensus 169 ~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK 248 (401)
T 2bwn_A 169 ELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAK 248 (401)
T ss_dssp HHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSS
T ss_pred HHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechh
Confidence 999999999999999999998665421 11 1 135899999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHHHH--hcCCCCChHHHHHHHhchhh---H--HHHHHHHHHHHHHHHHHHhCCCC
Q 019543 154 FIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKT---M--ALRVEKQQDNAQKIAEFLASHPR 226 (339)
Q Consensus 154 ~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~~~~~~~~~a~~~~~~l~~---~--~~r~~~~~~~a~~l~~~L~~~~~ 226 (339)
+++++ ||+++++ +++.+.++.... .++...++...+.+...++. . +...++..++.+++.+.|+++ +
T Consensus 249 ~~~~~----GG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 322 (401)
T 2bwn_A 249 AYGVF----GGYIAAS-ARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-G 322 (401)
T ss_dssp TTCSC----CEEEEEC-HHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred hccCC----CCEEecC-HHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-C
Confidence 99954 4888876 467777665322 23444556544444444433 2 556777778888899988875 4
Q ss_pred ceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC-cceeecccCCcccceeccccccCCCCCHHHHH
Q 019543 227 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 305 (339)
Q Consensus 227 i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~ 305 (339)
++.+ + ..+++++|.+++.....++.+.|. ..|+.++.+.. +.. +
T Consensus 323 ~~~~--~----------------~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~~~~------~~~------~----- 367 (401)
T 2bwn_A 323 MPII--D----------------HGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINF------PTV------P----- 367 (401)
T ss_dssp CCBC--C----------------CSSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECT------TTS------C-----
T ss_pred Cccc--C----------------CCCCeEEEEeCChHHHHHHHHHHHhcCCEEEeecCC------CCC------C-----
Confidence 4311 1 134689999876555677888884 67888764321 100 0
Q ss_pred hCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 306 ARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 306 ~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
-..+.+|+|++..++++.++.+.++|++
T Consensus 368 ---~~~~~iRis~~~~~t~~~i~~~~~~l~~ 395 (401)
T 2bwn_A 368 ---RGTERLRFTPSPVHDLKQIDGLVHAMDL 395 (401)
T ss_dssp ---TTCCEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEeeCCCCHHHHHHHHHHHHH
Confidence 0235899999987777777777777654
No 55
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.83 E-value=3.2e-19 Score=167.11 Aligned_cols=234 Identities=13% Similarity=0.124 Sum_probs=162.5
Q ss_pred CCchHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH------------------
Q 019543 53 GNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
.++...++++++++++|. +++++++||++|+.+++ .++++||+|+++++.|.+....+.
T Consensus 65 ~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 144 (363)
T 3ffh_A 65 PDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHD 144 (363)
T ss_dssp ----CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCC
T ss_pred CCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcC
Confidence 345678999999999985 57888899999998654 578999999999999887654433
Q ss_pred ------------------------------HHHHHHHHHc--CCEEEEeCCcCCCCCcC---cc----cCCCeEEEeccc
Q 019543 112 ------------------------------RKIAEMAHAH--GALLLVDNSIMSPVLSR---PL----ELGADIVMHSAT 152 (339)
Q Consensus 112 ------------------------------~~I~~la~~~--g~~livD~a~a~g~~~~---~~----~~~~Di~~~S~s 152 (339)
++|.++++.+ |+++|+|++|+...... .. ....++++.|+|
T Consensus 145 ~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 224 (363)
T 3ffh_A 145 LEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFS 224 (363)
T ss_dssp HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESS
T ss_pred HHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeech
Confidence 7788888777 99999999998433211 11 123358899999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch---hhHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l---~~~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
|.++.+|. ..|+++++ +++.+.++.... ....++...+.+...+ +.++.+.++..++.+++.+.|++++++..
T Consensus 225 K~~g~~G~-r~G~~~~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 300 (363)
T 3ffh_A 225 KIYGLASA-RVGYGIAD-KEIIRQLNIVRP--PFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKL 300 (363)
T ss_dssp STTCCSSC-CCEEEEEC-HHHHHHHHHTCC--SCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred hhhcCchh-ceeeeecC-HHHHHHHHHhCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceE
Confidence 99986653 45677775 467777765432 4456776665555555 44566777778889999999988666642
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 309 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~ 309 (339)
+|. .+.++++.++. ...++.+.|...|+.++.|..+ |
T Consensus 301 --~~~----------------~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~----------------------~- 337 (363)
T 3ffh_A 301 --YPA----------------NGNFVLIDLGI--EAGTIFSYLEKNGYITRSGAAL----------------------G- 337 (363)
T ss_dssp --CCC----------------CSSEEEEECSS--CHHHHHHHHHHTTEECEETTTT----------------------T-
T ss_pred --CCC----------------CCeEEEEECCC--CHHHHHHHHHHCCeEEEeCccC----------------------C-
Confidence 231 35678888764 3456777777778887765421 1
Q ss_pred CCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 310 TEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 310 ~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.++.+|||++ +++.++.+.++|++
T Consensus 338 ~~~~iRis~~---~~~~i~~~~~~l~~ 361 (363)
T 3ffh_A 338 FPTAVRITIG---KEEDNSAVIALLEK 361 (363)
T ss_dssp CTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred CCCeEEEECC---CHHHHHHHHHHHHH
Confidence 1478999998 44455666666654
No 56
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.83 E-value=7.7e-20 Score=178.53 Aligned_cols=251 Identities=18% Similarity=0.163 Sum_probs=151.7
Q ss_pred CCcccCC--CCchHHHHH----HHHHhHhCCCe----EEEc-CcHHHHHHH-HHHhcCCCCEEEEcCCCccchH------
Q 019543 46 PYDYTRS--GNPTRDALE----SLLAKLDKADR----ALCF-TSGMAALAA-VTHLLGTGEEIVAGDDLYGGTD------ 107 (339)
Q Consensus 46 ~~~y~r~--~~~~~~~le----~~la~~~g~~~----~l~~-~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~------ 107 (339)
+|..+|. +++.+++|| +++++++|++. +.++ +||++||.+ +.++++|||+|+++++.|++..
T Consensus 85 G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~ 164 (490)
T 2a7v_A 85 GYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMS 164 (490)
T ss_dssp C------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC---------------
T ss_pred CCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhh
Confidence 4455553 557778888 89999999986 5554 599999985 5569999999999887653210
Q ss_pred --------------------------------HHHH--------------------HHHHHHHHHcCCEEEEeCCcCCCC
Q 019543 108 --------------------------------RLLS--------------------RKIAEMAHAHGALLLVDNSIMSPV 135 (339)
Q Consensus 108 --------------------------------~~~~--------------------~~I~~la~~~g~~livD~a~a~g~ 135 (339)
..+. ++|.++|++||++|++|++|+.|.
T Consensus 165 ~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~gl 244 (490)
T 2a7v_A 165 DVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGL 244 (490)
T ss_dssp ----------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHH
T ss_pred cchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEcccccccc
Confidence 0000 999999999999999999996543
Q ss_pred -----CcCcccCCCeEEEeccccccccCCCceEEEEEEcCh--------------hHHHHHHHHHHhc-CCCCChH-HHH
Q 019543 136 -----LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------RLAKELYFLQNAE-GSGLAPF-DCW 194 (339)
Q Consensus 136 -----~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~--------------~l~~~l~~~~~~~-~~~~~~~-~a~ 194 (339)
...++. ++|++++|+||+|+|+ .||+++++++ ++.++++...... ..+.++. .++
T Consensus 245 v~~g~~~~~~~-~aDiv~~S~hK~l~Gp---~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaA 320 (490)
T 2a7v_A 245 VAAKVIPSPFK-HADIVTTTTHKTLRGA---RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAA 320 (490)
T ss_dssp HHTTSSCCGGG-TCSEEEEESSGGGCSC---SCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHH
T ss_pred ccCCcCCCCCC-CCCEEEECCcccCccc---cchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHH
Confidence 233443 6899999999999865 4799998864 2455555443211 1122222 222
Q ss_pred H--HHh-ch-hhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHH-HHHHHH
Q 019543 195 I--CLR-GV-KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA-LSKHVV 269 (339)
Q Consensus 195 ~--~~~-~l-~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~-~~~~~~ 269 (339)
+ ++. .+ +.++++.++..+|++++++.|++. +++.+. + ...++++++.+.+.. ...++.
T Consensus 321 la~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~-~---------------~t~t~lv~vdl~~~g~~~~~~~ 383 (490)
T 2a7v_A 321 VAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVS-G---------------GTDNHLVLVDLRPKGLDGARAE 383 (490)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGG-G---------------SCSSSEEEEECTTTTCCHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEec-C---------------CCCCeEEEEEeCCCCCCHHHHH
Confidence 2 122 12 345678888899999999999886 443221 1 113578888875321 344566
Q ss_pred ccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEec--------cCCHHHHHHHHHHHHh
Q 019543 270 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------IEDVNDLISDLDKALR 335 (339)
Q Consensus 270 ~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg--------~e~~~~li~~l~~al~ 335 (339)
+.|++.||.++.+... ....| ..++.|||+.. .+|.+.+++.|.++++
T Consensus 384 ~~L~~~GI~v~~~~~p-~d~~p-----------------~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 384 RVLELVSITANKNTCP-GDRSA-----------------ITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp HHHHHTTEECEEECCT-TCCCS-----------------SSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCeEEecCccC-CCCCC-----------------CCCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence 6677778888754210 00011 13467999763 3556666666666654
No 57
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.83 E-value=5.4e-20 Score=172.55 Aligned_cols=259 Identities=15% Similarity=0.098 Sum_probs=162.0
Q ss_pred CcccCCCCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-Hhc----CCCCEEEEcCCCccchHHHHH--------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLL----GTGEEIVAGDDLYGGTDRLLS-------- 111 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll----~~GD~Vi~~~~~y~~~~~~~~-------- 111 (339)
|.+++...+..+++++++++++|.+ ++++++||++|+.+++ .+. +|||+|+++++.|++....+.
T Consensus 35 ~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~ 114 (382)
T 4hvk_A 35 HSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFE 114 (382)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCE
T ss_pred chHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCE
Confidence 4455555678889999999999975 4777888899997644 455 899999999988876543211
Q ss_pred -------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc-ccCCCeEE
Q 019543 112 -------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP-LELGADIV 147 (339)
Q Consensus 112 -------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~-~~~~~Di~ 147 (339)
++|.++|++||+ +++|++|+.+..... ...++|++
T Consensus 115 ~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~ 193 (382)
T 4hvk_A 115 VEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGADML 193 (382)
T ss_dssp EEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEE
T ss_pred EEEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEE
Confidence 999999999999 999999987754322 23478999
Q ss_pred EeccccccccCCCceEEEEEEcChhHHHHHHHHH-------HhcCCCCChHHHHHHHhch----hhHHHHHHHHHHHHHH
Q 019543 148 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-------NAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQK 216 (339)
Q Consensus 148 ~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-------~~~~~~~~~~~a~~~~~~l----~~~~~r~~~~~~~a~~ 216 (339)
++|+||++|+.| .|+++++++. .++... .......+....+.+...+ +.++...++..+++++
T Consensus 194 ~~s~~K~~g~~g---~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 267 (382)
T 4hvk_A 194 TISSNDIYGPKG---VGALWIRKEA---KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDR 267 (382)
T ss_dssp EEESGGGTSCTT---CEEEEEETTC---CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeHHHhcCCCc---eEEEEEcCcc---CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999876443 3555555432 111110 0112233443333222222 2345667777888999
Q ss_pred HHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccC
Q 019543 217 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH 296 (339)
Q Consensus 217 l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h 296 (339)
+.+.|+++++++.. .|. . ...++++.|.+.+. ...++.+.|...|+.++.|..++.....
T Consensus 268 l~~~L~~~~~~~~~-~~~--~-----------~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~~~----- 327 (382)
T 4hvk_A 268 IIDNVLKIEESYLN-GHP--E-----------KRLPNNVNVRFSYI-EGESIVLSLDMAGIQASTGSACSSKTLQ----- 327 (382)
T ss_dssp HHHHHTTSTTEEEC-SCS--S-----------SBCTTEEEEEETTC-CHHHHHHHHHHTTCBCBCC--------C-----
T ss_pred HHHHHhcCCCeEEe-CCc--c-----------ccCCCEEEEEECCC-CHHHHHHHHHHCCEEEeeCCccCCCCCc-----
Confidence 99999988876532 221 0 11245788877532 2456777787789998887543321110
Q ss_pred CCCCHHHHHhCCCC----CCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 297 ASIPVEVRQARGLT----EDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 297 ~~~~~~~~~~~g~~----~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+......+|++ ++.||||++..++++.++.+.++|+
T Consensus 328 ---~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~ 367 (382)
T 4hvk_A 328 ---PSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLP 367 (382)
T ss_dssp ---CCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHH
T ss_pred ---chHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHH
Confidence 11122334443 5789999996655555555554443
No 58
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.83 E-value=4e-20 Score=173.43 Aligned_cols=247 Identities=15% Similarity=0.120 Sum_probs=160.3
Q ss_pred ccCCCCchHHHHHHH-HHhHhCCCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHH----------------
Q 019543 49 YTRSGNPTRDALESL-LAKLDKADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLL---------------- 110 (339)
Q Consensus 49 y~r~~~~~~~~le~~-la~~~g~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~---------------- 110 (339)
+++...+..+++++. +++++|.+.++++++|++|+.+++ .+++|||+|+++++.|++....+
T Consensus 47 ~~~~~~~~~~~l~~~~la~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 126 (371)
T 2e7j_A 47 LDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYP 126 (371)
T ss_dssp ------CCHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTT
T ss_pred chhhHHHHHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCC
Confidence 334456789999999 999999885555556689998644 57899999999998775432111
Q ss_pred -------------------H--------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEec
Q 019543 111 -------------------S--------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHS 150 (339)
Q Consensus 111 -------------------~--------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S 150 (339)
. ++|.++|++||+++|+|++|+.+... .....+.|++++|
T Consensus 127 ~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 206 (371)
T 2e7j_A 127 DYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGS 206 (371)
T ss_dssp TCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEE
T ss_pred CCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEec
Confidence 1 99999999999999999999887642 2233468999999
Q ss_pred cccccccCCCceEEEEEEcChhHHHH-HHHHHH--hc-----CCCCChHHHHHHHhchhhHH-HHHHHH--HHHHHHHHH
Q 019543 151 ATKFIAGHSDVMAGVLAVKGERLAKE-LYFLQN--AE-----GSGLAPFDCWICLRGVKTMA-LRVEKQ--QDNAQKIAE 219 (339)
Q Consensus 151 ~sK~l~g~~~~~gG~v~~~~~~l~~~-l~~~~~--~~-----~~~~~~~~a~~~~~~l~~~~-~r~~~~--~~~a~~l~~ 219 (339)
+||+++++. .+|++++++ ++++. ++.... .. ....++...+.+...++.+. ...++. .++++++.+
T Consensus 207 ~sK~~~~~~--~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~ 283 (371)
T 2e7j_A 207 GHKSMAASG--PIGVMGMKE-EWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEKARRFAA 283 (371)
T ss_dssp HHHHSSCCS--SCEEEEECT-TTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHH
T ss_pred CCcCCCCCC--CcEEEEEec-hhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998753 468888876 45555 543322 11 23344544444444444443 345555 678889999
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 299 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~ 299 (339)
.|+++ +++.+ .|. .+.+++++|.++ ...++.+.|...|+.+.. . .+..
T Consensus 284 ~L~~~-~~~~~-~~~--------------~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~-~------~~~~------ 331 (371)
T 2e7j_A 284 EMEKL-GIKQL-GDN--------------PHNHDLMFFHAE---VLYEISKKAKGGRFFLYR-E------LKSR------ 331 (371)
T ss_dssp HHHHT-TCEEE-SSS--------------SCCSSEEEEECH---HHHHHHHHSSSGGGHHHH-H------HHHT------
T ss_pred HHHHc-CcEEe-cCC--------------CccCceEEEECC---CHHHHHHHHHHCCEEEEe-c------cccc------
Confidence 99877 55432 221 113678888875 456788888877776542 1 0000
Q ss_pred CHHHHHhCCCCCCeEE-EEeccC-CHHHHHHHHHHHHh
Q 019543 300 PVEVRQARGLTEDLVR-ISVGIE-DVNDLISDLDKALR 335 (339)
Q Consensus 300 ~~~~~~~~g~~~~~lR-isvg~e-~~~~li~~l~~al~ 335 (339)
. ..|..++.+| +|++.. .+++.++.+.++|+
T Consensus 332 ~-----~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~ 364 (371)
T 2e7j_A 332 K-----IHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFK 364 (371)
T ss_dssp T-----EECSCTTCCSEEEEECTTCCHHHHHHHHHHHH
T ss_pred c-----ccCCCCCceEEEEeeccCCCHHHHHHHHHHHH
Confidence 0 0023357899 999976 55555566555554
No 59
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.83 E-value=2.6e-19 Score=168.36 Aligned_cols=238 Identities=12% Similarity=0.046 Sum_probs=157.7
Q ss_pred CchHHHHHHHHHhHhCCCe----EEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccch--HHHHH---------------
Q 019543 54 NPTRDALESLLAKLDKADR----ALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGT--DRLLS--------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~----~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~--~~~~~--------------- 111 (339)
.+..+++++++++++|.+. +++++||++|+. ++ .+++|||+|+++++.|.+. ..+..
T Consensus 34 ~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 112 (384)
T 3zrp_A 34 VEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPGD 112 (384)
T ss_dssp HHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHHHHHHHHTTSSCEEEEECCSTTC
T ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchHHHHHHHHHcCCcEEEecCCCCC
Confidence 4578899999999999764 788888999999 55 4789999999999888652 22111
Q ss_pred ----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-cccCCCeEEEeccccccc
Q 019543 112 ----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKFIA 156 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-~~~~~~Di~~~S~sK~l~ 156 (339)
++|.++|++||+++|+|++|+.+.... ....+.|++++|+||+++
T Consensus 113 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~ 192 (384)
T 3zrp_A 113 YVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALG 192 (384)
T ss_dssp CCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTC
T ss_pred CCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCccccc
Confidence 999999999999999999998775432 234578999999999997
Q ss_pred cCCCceEEEEEEcChhHHHHH-------------HHHHH---h----cC---CCCChHHHHHHHhchhh-----HHHHHH
Q 019543 157 GHSDVMAGVLAVKGERLAKEL-------------YFLQN---A----EG---SGLAPFDCWICLRGVKT-----MALRVE 208 (339)
Q Consensus 157 g~~~~~gG~v~~~~~~l~~~l-------------~~~~~---~----~~---~~~~~~~a~~~~~~l~~-----~~~r~~ 208 (339)
|+.+ .|++++++ ++++.+ ..+.. . .+ ...+....+.+...++. ++...+
T Consensus 193 ~~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~ 269 (384)
T 3zrp_A 193 SAAG--LGLLLLSP-KALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIK 269 (384)
T ss_dssp CCSS--EEEEEECH-HHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCc--eEEEEECH-HHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 6533 57887765 566665 32221 1 11 13344333322222322 456677
Q ss_pred HHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccce
Q 019543 209 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLI 288 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~ 288 (339)
+..++++++.+.|+++ +++. ..| .+. ...+.+++|.+.+ ....++.+.|...|+.++.|..
T Consensus 270 ~~~~~~~~l~~~L~~~-g~~~-~~~----~~~--------~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~---- 330 (384)
T 3zrp_A 270 RHTMVASAIRAGLEAL-GLEI-VAR----RPE--------SYSNTVTGVILKV-ADPQKVLAGTVNEGVEFAPGVH---- 330 (384)
T ss_dssp HHHHHHHHHHHHHHHT-TCCB-SCS----SGG--------GBCSSEEEEECSS-SCHHHHHHHHHTTTCCCEECCC----
T ss_pred HHHHHHHHHHHHHHHC-CCeE-ccC----ccc--------ccCccEEEEECCC-CCHHHHHHHHHHCCEEEecCCC----
Confidence 7778889999999887 5432 111 000 1135677888865 3456777777777887765431
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
.+ . +.+|||++...+++.++.+.++|
T Consensus 331 -~~------------------~-~~iRi~~~~~~~~e~i~~~~~~l 356 (384)
T 3zrp_A 331 -PA------------------F-KYFRIGHMGWVTPNDAIIAISVI 356 (384)
T ss_dssp -TT------------------C-CEEEEECCSSCCHHHHHHHHHHH
T ss_pred -CC------------------c-CEEEEeccccCCHHHHHHHHHHH
Confidence 00 1 67999998655444444444444
No 60
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.83 E-value=5.5e-19 Score=166.42 Aligned_cols=238 Identities=15% Similarity=0.041 Sum_probs=160.6
Q ss_pred chHHHHHHHHHhHh----CC----C-eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------
Q 019543 55 PTRDALESLLAKLD----KA----D-RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~----g~----~-~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
+...+|++.+++++ |. + +++++++|++|+.+++ .+++|||+|+++++.|++....+.
T Consensus 63 ~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 142 (376)
T 2dou_A 63 SCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLRE 142 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECBCT
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCC
Confidence 35778999999887 75 3 6777888899997544 578899999999998877654322
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc----Cccc----CCCe
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS----RPLE----LGAD 145 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~----~~~~----~~~D 145 (339)
++|+++|++||+++|+|++|+.+... .... .+.+
T Consensus 143 ~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 222 (376)
T 2dou_A 143 DGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERV 222 (376)
T ss_dssp TSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTE
T ss_pred CCCCCHHHHHHhhccCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcE
Confidence 78999999999999999999764321 1122 2457
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~~L 221 (339)
++++|+||+++.+| ...|+++++ +++++.++......+...++...+.+...|+. ++...++..++.+++.+.|
T Consensus 223 i~~~s~sK~~~~~G-~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 300 (376)
T 2dou_A 223 VELFSLSKSYNLAG-FRLGFALGS-EEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEAL 300 (376)
T ss_dssp EEEEEHHHHHTCGG-GCCEEEEEC-HHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecchhhcCChh-heeEEEecC-HHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998655 446788776 47888887766655555666655544444433 4555666778888899999
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCH
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 301 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~ 301 (339)
+++ +. +..| ..+.++++.+.+.....++.+.|...|+.++.|..+. +
T Consensus 301 ~~~--~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~----~---------- 347 (376)
T 2dou_A 301 KGV--LS-LLPP----------------RATMYLWGRLPEGVDDLEFGLRLVERGVALAPGRGFG----P---------- 347 (376)
T ss_dssp TTT--SE-ECCC----------------CBSSEEEEECCTTCCHHHHHHHHHHTTEECEEGGGGC----G----------
T ss_pred HHh--cC-ccCC----------------CeeEEEEEECCCCCCHHHHHHHHHHCCEEEcCchhhC----C----------
Confidence 876 32 2111 1234577777533234567777766688877654321 0
Q ss_pred HHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 302 EVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 302 ~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
-.++.+|||++. +++.++.+.++|++
T Consensus 348 -------~~~~~~Ris~~~--~~~~i~~~l~~l~~ 373 (376)
T 2dou_A 348 -------GGKGFVRIALVR--PLEELLEAAKRIRE 373 (376)
T ss_dssp -------GGTTEEEEECCS--CHHHHHHHHHHHHH
T ss_pred -------CCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 024689999986 34444555555543
No 61
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.83 E-value=3.7e-19 Score=167.25 Aligned_cols=233 Identities=12% Similarity=0.109 Sum_probs=159.4
Q ss_pred hHHHHHHHHHhHhC--------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 56 TRDALESLLAKLDK--------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g--------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
...+|++.++++++ .+++++++||++|+.+++ .+++|||+|+++++.|++....+.
T Consensus 67 ~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~d~~~ 146 (370)
T 2z61_A 67 GILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCDFTVES 146 (370)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSSHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeCCCHHH
Confidence 46678888888764 257889999999998654 478999999999999987654322
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C---ccc----CCCeEEEeccccccc
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R---PLE----LGADIVMHSATKFIA 156 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~-~---~~~----~~~Di~~~S~sK~l~ 156 (339)
+ |.++|++||+++|+|++|+.+... . ... .+.|++++|+||+++
T Consensus 147 l~~~l~~~~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~ 225 (370)
T 2z61_A 147 LEEALSDKTKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYA 225 (370)
T ss_dssp HHHHCCSSEEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTT
T ss_pred HHHhcccCceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccC
Confidence 6 999999999999999999865431 1 112 256899999999997
Q ss_pred cCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh-----HHHHHHHHHHHHHHHHHHHhCCCCceEEe
Q 019543 157 GHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVN 231 (339)
Q Consensus 157 g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~-----~~~r~~~~~~~a~~l~~~L~~~~~i~~v~ 231 (339)
.+| ...|++++++ ++++.++......+...++...+.+...|+. ++...++..++.+++.+.|+++ +++.+
T Consensus 226 ~~G-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~- 301 (370)
T 2z61_A 226 MTG-WRIGYVISND-EIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEVN- 301 (370)
T ss_dssp CGG-GCCEEEECCH-HHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCC-
T ss_pred Ccc-ceEEEEEECH-HHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCeec-
Confidence 555 4567888775 7888887766655566777766666666653 3445566677888888888876 44321
Q ss_pred cCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC-cceeecccCCcccceeccccccCCCCCHHHHHhCCCC
Q 019543 232 YAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 310 (339)
Q Consensus 232 ~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~ 310 (339)
.| ..+.++++.+.+ ...++.+.|. ..|+.++.|..+.. . .
T Consensus 302 ~~----------------~~~~~~~~~~~~--~~~~~~~~l~~~~gi~v~~g~~f~~---~------------------~ 342 (370)
T 2z61_A 302 NP----------------IGAYYVFPNIGE--DGREFAYKLLKEKFVALTPGIGFGS---K------------------G 342 (370)
T ss_dssp CC----------------CBTTEECCBCSS--CHHHHHHHHHHHHCEECEEGGGGCG---G------------------G
T ss_pred CC----------------CcceEEEEecCC--CHHHHHHHHHHhCCEEEeCchhhCC---C------------------C
Confidence 11 123455666654 3456777775 67888876643210 0 2
Q ss_pred CCeEEEEeccCCHHHHHHHHHHHH
Q 019543 311 EDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 311 ~~~lRisvg~e~~~~li~~l~~al 334 (339)
++.+|||++. +++.++.+.++|
T Consensus 343 ~~~~Ri~~~~--~~~~i~~~~~~l 364 (370)
T 2z61_A 343 KNYIRISYAN--SYENIKEGLERI 364 (370)
T ss_dssp SSBEEEECCS--CHHHHHHHHHHH
T ss_pred CCEEEEEEeC--CHHHHHHHHHHH
Confidence 4679999993 333344444443
No 62
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.83 E-value=6.3e-19 Score=169.09 Aligned_cols=213 Identities=17% Similarity=0.181 Sum_probs=154.4
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH----------------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS---------------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~---------------------- 111 (339)
.+...+||+.+++++|.+++++++||++|+.+++..+.+||+|+++++.|.+....+.
T Consensus 51 ~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~ 130 (424)
T 2po3_A 51 GPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAGLTGEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQ 130 (424)
T ss_dssp CHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHTCCSEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHH
Confidence 4778999999999999999999999999998766544689999999999887654332
Q ss_pred ------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc--CcccCCCeEEEeccc--cccccCCCceE
Q 019543 112 ------------------------RKIAEMAHAHGALLLVDNSIMSPVLS--RPLELGADIVMHSAT--KFIAGHSDVMA 163 (339)
Q Consensus 112 ------------------------~~I~~la~~~g~~livD~a~a~g~~~--~~~~~~~Di~~~S~s--K~l~g~~~~~g 163 (339)
++|.++|++||+++|+|++|+.|... ..+....|++++||| |.+++ ..+
T Consensus 131 l~~~i~~~~~~v~~~~~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~l~~---~~~ 207 (424)
T 2po3_A 131 VAAAVTPRTSAVVGVHLWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNA---FEG 207 (424)
T ss_dssp HGGGCCTTEEEEEEECGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCC---SSC
T ss_pred HHHhhCcCCcEEEEECCCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCCccC---CCC
Confidence 99999999999999999999865432 223323589999998 87775 357
Q ss_pred EEEEEcChhHHHHHHHHHHhc------------CCCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEe
Q 019543 164 GVLAVKGERLAKELYFLQNAE------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVN 231 (339)
Q Consensus 164 G~v~~~~~~l~~~l~~~~~~~------------~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~ 231 (339)
|+++++++++++.++...... +..+++..+++++..++.++...+++.++++++.+.|+++++++.+.
T Consensus 208 G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 287 (424)
T 2po3_A 208 GAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYREHLADLPGVLVAD 287 (424)
T ss_dssp EEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECC
T ss_pred eEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccC
Confidence 899887557777777654321 12456777777776777777788888889999999999887764322
Q ss_pred cCCCCCCCchHhHhhhcCCCcceEEEeeCCH---HHHHHHHccCCcceeeccc
Q 019543 232 YAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---ALSKHVVETTKYFSITVSF 281 (339)
Q Consensus 232 ~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~---~~~~~~~~~L~~~~i~v~~ 281 (339)
.|.- ......++++.+++. ....++.+.|...|+.++.
T Consensus 288 ~~~~------------~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~ 328 (424)
T 2po3_A 288 HDRH------------GLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRA 328 (424)
T ss_dssp GGGG------------SCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEECBC
T ss_pred CCCC------------CccccEEEEEEECCccchhhHHHHHHHHHHCCCceec
Confidence 1100 001125777777531 1245677777777887764
No 63
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.83 E-value=4.9e-20 Score=171.51 Aligned_cols=235 Identities=17% Similarity=0.155 Sum_probs=157.5
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchH------------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTD------------------------ 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~------------------------ 107 (339)
.++...+||+++++++|.+++++++||++|+.+ +..+++|||+|+++++.|..+.
T Consensus 36 ~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d 115 (347)
T 1jg8_A 36 EDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMD 115 (347)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEECEETTEEC
T ss_pred CChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEecCCCCccC
Confidence 567889999999999999999999999999875 4457899999999988764311
Q ss_pred -----HHH--------H-----------------------HHHHHHHHHcCCEEEEeCCcCCC------CCcCcccCCCe
Q 019543 108 -----RLL--------S-----------------------RKIAEMAHAHGALLLVDNSIMSP------VLSRPLELGAD 145 (339)
Q Consensus 108 -----~~~--------~-----------------------~~I~~la~~~g~~livD~a~a~g------~~~~~~~~~~D 145 (339)
..+ + ++|+++|++||+++++|++|..+ .....+..++|
T Consensus 116 ~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d 195 (347)
T 1jg8_A 116 PDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYAD 195 (347)
T ss_dssp HHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCS
T ss_pred HHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhccccc
Confidence 010 1 68999999999999999987432 11111223578
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCC--ChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~--~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~ 223 (339)
.++.|+||+++++ .||+++.+ ++++++++..+..++..+ +...++++..+++....++++..++++++.+.|++
T Consensus 196 ~~~~s~sK~l~~~---~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~ 271 (347)
T 1jg8_A 196 SVMFCLSKGLCAP---VGSVVVGD-RDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKE 271 (347)
T ss_dssp EEEEESSSTTCCS---SCEEEEEC-HHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecccccCCC---ceEEEEcC-HHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8889999999853 46666665 567787776665555433 44555555555554433455555677888888877
Q ss_pred CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHH
Q 019543 224 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 302 (339)
Q Consensus 224 ~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~ 302 (339)
+ ++. +..+ ...++++++.+++ .....+|.+.|...|+.++.+
T Consensus 272 ~-~~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~-------------------- 314 (347)
T 1jg8_A 272 I-GYS-VNPE---------------DVKTNMVILRTDNLKVNAHGFIEALRNSGVLANAV-------------------- 314 (347)
T ss_dssp H-TCB-CCGG---------------GCCSSEEEEECTTSSSCHHHHHHHHHHHTEECEEE--------------------
T ss_pred c-Cce-eccC---------------CCcceEEEEEcccccCCHHHHHHHHHHCCCEEecC--------------------
Confidence 6 443 1111 1145688888753 223567888887778776521
Q ss_pred HHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 303 VRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 303 ~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.++.+|+|++...+++.++.+.++|+
T Consensus 315 -------~~~~iRl~~~~~~~~e~i~~~~~~l~ 340 (347)
T 1jg8_A 315 -------SDTEIRLVTHKDVSRNDIEEALNIFE 340 (347)
T ss_dssp -------ETTEEEEECCTTSCHHHHHHHHHHHH
T ss_pred -------CCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 12569999976555555555555544
No 64
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.83 E-value=2.8e-20 Score=176.40 Aligned_cols=261 Identities=17% Similarity=0.089 Sum_probs=155.8
Q ss_pred CcccCCCCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHHH-hc----CCCC-EEEEcCCCccchHHHHH-------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVTH-LL----GTGE-EIVAGDDLYGGTDRLLS------- 111 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il~-ll----~~GD-~Vi~~~~~y~~~~~~~~------- 111 (339)
+.+++...+..+++++++++++|.+ .+++++||++|+.+++. ++ +||| +|+++++.|++....+.
T Consensus 55 ~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~ 134 (400)
T 3vax_A 55 HEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGF 134 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTC
T ss_pred chhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCC
Confidence 3344444567899999999999975 68888888999986554 55 8999 99999887776532211
Q ss_pred --------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcc-cCCCeE
Q 019543 112 --------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPL-ELGADI 146 (339)
Q Consensus 112 --------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~-~~~~Di 146 (339)
++|.++|++||++||+|++|+.+...... .. +|+
T Consensus 135 ~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~-~d~ 213 (400)
T 3vax_A 135 EVDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP-IDM 213 (400)
T ss_dssp EEEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC-CSE
T ss_pred eEEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc-CcE
Confidence 99999999999999999999877543222 23 899
Q ss_pred EEeccccccccCCCceEEEEE-EcChhHH---HHHHHHH-------HhcCCCCChHHHHHHHhchh----hHHHHHHHHH
Q 019543 147 VMHSATKFIAGHSDVMAGVLA-VKGERLA---KELYFLQ-------NAEGSGLAPFDCWICLRGVK----TMALRVEKQQ 211 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~-~~~~~l~---~~l~~~~-------~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~ 211 (339)
+++|+||.+++.+ .|+++ ++++.+. ..+.... .......++...+.+...++ .++...++..
T Consensus 214 ~~~s~~K~~g~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 290 (400)
T 3vax_A 214 ISISGHKIGAPKG---VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQ 290 (400)
T ss_dssp EEEETGGGTSCSS---CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred EEEeHHHhCCCCc---eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 9999999665332 35555 5552111 1111110 11123334443333323333 2455677777
Q ss_pred HHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceecc
Q 019543 212 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMP 291 (339)
Q Consensus 212 ~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p 291 (339)
++++++.+.|+ .++++.. .|. . ...+++++|.+.+. ...++.+.|. .|+.++.|..++....+
T Consensus 291 ~~~~~l~~~L~-~~~~~~~-~~~--~-----------~~~~~~~~~~~~~~-~~~~l~~~L~-~gi~v~~g~~~~~~~~~ 353 (400)
T 3vax_A 291 DLRSRLLAGLA-STSFQVN-GDQ--D-----------HVVPHILNLSFEDV-DAEAFLVTLK-DLVAVATGSASTSASFT 353 (400)
T ss_dssp HHHHHHHHHHT-TTTCEEC-SCT--T-----------SBCTTEEEEECTTC-CHHHHHHHHH-HHHHHTTTTEEEEEEEC
T ss_pred HHHHHHHHhhC-CCCEEEe-CCc--c-----------cCCCCEEEEEeCCC-CHHHHHHHHh-cCcEEEecccccCCCCC
Confidence 88889999998 7776432 121 0 11346888877542 3457788888 89999988654332111
Q ss_pred ccccCCCCCHHHHHhCCCC----CCeEEEEe-ccCCHHHHHHHHHHHHhc
Q 019543 292 CFMSHASIPVEVRQARGLT----EDLVRISV-GIEDVNDLISDLDKALRT 336 (339)
Q Consensus 292 ~~~~h~~~~~~~~~~~g~~----~~~lRisv-g~e~~~~li~~l~~al~~ 336 (339)
. ......+|++ ++.||||+ +...+++.++.+.++|++
T Consensus 354 ~--------~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~ 395 (400)
T 3vax_A 354 P--------SHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAK 395 (400)
T ss_dssp C--------HHHHHTTTCCHHHHTSEEEEEEEEC----------------
T ss_pred c--------cHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHH
Confidence 1 1222334544 48999999 876666666666666654
No 65
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.83 E-value=6.5e-19 Score=165.33 Aligned_cols=236 Identities=14% Similarity=0.104 Sum_probs=160.7
Q ss_pred CchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 54 NPTRDALESLLAKLDKAD--RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
.+...++++.+++++|.+ .++++++|++|+.+++..+ +||+|+++.+.|++....+.
T Consensus 58 ~~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~-~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l 136 (364)
T 1lc5_A 58 DADYFHLHQALARHHQVPASWILAGNGETESIFTVASGL-KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLT 136 (364)
T ss_dssp CTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH-CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCC
T ss_pred CCCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc-CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccchh
Confidence 345789999999999864 6777788899998766544 78999999988875432211
Q ss_pred --------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-c-Ccc----cCCCeEEEecccc
Q 019543 112 --------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-S-RPL----ELGADIVMHSATK 153 (339)
Q Consensus 112 --------------------------------~~I~~la~~~g~~livD~a~a~g~~-~-~~~----~~~~Di~~~S~sK 153 (339)
++|+++|++||+++|+|++|+.+.. . ..+ ..+.+++++|+||
T Consensus 137 ~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 216 (364)
T 1lc5_A 137 DAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTK 216 (364)
T ss_dssp TTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTT
T ss_pred HHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECch
Confidence 8899999999999999999975443 1 112 1356899999999
Q ss_pred ccccCCCceEEEEE-EcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 154 FIAGHSDVMAGVLA-VKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 154 ~l~g~~~~~gG~v~-~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
+++.+| ...|+++ ++ +++++.++... .....++...+.+...|+. ++...++..++.+++.+.|+++|+++.
T Consensus 217 ~~~~~G-~r~G~~~~~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 292 (364)
T 1lc5_A 217 FYAIPG-LRLGYLVNSD-DAAMARMRRQQ--MPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTV 292 (364)
T ss_dssp TTTCTT-TCCEEEECCC-HHHHHHHHHHS--CTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred hhcCCc-cceEEEEECC-HHHHHHHHHhC--CCCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 998655 4457887 55 57777776543 2445677766666666654 455666677888899999998877642
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 309 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~ 309 (339)
+|. .+.++++.+.+. ..++.+.|...|+.++.|..+. + .
T Consensus 293 --~~~----------------~g~~~~~~~~~~--~~~l~~~l~~~gi~v~~g~~~~----~-----------------~ 331 (364)
T 1lc5_A 293 --YPG----------------RANYLLLRCERE--DIDLQRRLLTQRILIRSCANYP----G-----------------L 331 (364)
T ss_dssp --CCC----------------SSSEEEEEESCT--TCCHHHHHHTTTEECEECTTST----T-----------------C
T ss_pred --CCC----------------CCeEEEEECCCc--HHHHHHHHHHCCcEEeeCcccC----C-----------------C
Confidence 231 356777877532 2345666656688877654321 0 1
Q ss_pred CCCeEEEEeccC-CHHHHHHHHHHHHh
Q 019543 310 TEDLVRISVGIE-DVNDLISDLDKALR 335 (339)
Q Consensus 310 ~~~~lRisvg~e-~~~~li~~l~~al~ 335 (339)
.++.+|||++.+ +.+.+++.|.+.++
T Consensus 332 ~~~~iRis~~~~~~~~~l~~~l~~~~~ 358 (364)
T 1lc5_A 332 DSRYYRVAIRSAAQNERLLAALRNVLT 358 (364)
T ss_dssp CTTEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 357899999852 23445555555444
No 66
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.82 E-value=3.6e-19 Score=166.91 Aligned_cols=231 Identities=12% Similarity=0.110 Sum_probs=157.0
Q ss_pred CchHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHH------------------H-
Q 019543 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLL------------------S- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~------------------~- 111 (339)
++...+|++++++++|. +++++++||++|+.+++ .+++|||+|+++.+.|.+....+ .
T Consensus 64 ~~~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~ 143 (365)
T 3get_A 64 DDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEF 143 (365)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCHHHH
T ss_pred CCChHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCCCCH
Confidence 34447999999999994 57888899999998654 57899999999999886543211 1
Q ss_pred -----------------------------HHHHHHHH--HcCCEEEEeCCcCCCC---C----cCcc----cCCCeEEEe
Q 019543 112 -----------------------------RKIAEMAH--AHGALLLVDNSIMSPV---L----SRPL----ELGADIVMH 149 (339)
Q Consensus 112 -----------------------------~~I~~la~--~~g~~livD~a~a~g~---~----~~~~----~~~~Di~~~ 149 (339)
++|.++++ ++|+++|+|++|+.+. . .... ..+.+++++
T Consensus 144 ~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 223 (365)
T 3get_A 144 KKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLG 223 (365)
T ss_dssp HHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEE
T ss_pred HHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEe
Confidence 66667766 6799999999997333 1 1111 124579999
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch---hhHHHHHHHHHHHHHHHHHHHhCCCC
Q 019543 150 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFLASHPR 226 (339)
Q Consensus 150 S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l---~~~~~r~~~~~~~a~~l~~~L~~~~~ 226 (339)
|+||+++.+|. ..|+++++ +++.+.++..... ...++...+.+...+ +.++.+.++..++.+++.+.|+++ +
T Consensus 224 s~sK~~~~~G~-r~G~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g 298 (365)
T 3get_A 224 TFSKLYGLGGL-RIGYGIAN-ANIISAFYKLRAP--FNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-N 298 (365)
T ss_dssp ESSSTTSCTTT-CCEEEEEC-HHHHHHHHHHSCT--TCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred ecchHhcCcch-heEEEEcC-HHHHHHHHHhcCC--CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 99999986653 45777775 5777777665433 345666555444443 345667777888899999999887 5
Q ss_pred ceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHh
Q 019543 227 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 306 (339)
Q Consensus 227 i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~ 306 (339)
++. +|. .+.++++.+.+. ...++.+.|...|+.++.|..+
T Consensus 299 ~~~--~~~----------------~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~--------------------- 338 (365)
T 3get_A 299 IKI--IDS----------------YTNFITYFFDEK-NSTDLSEKLLKKGIIIRNLKSY--------------------- 338 (365)
T ss_dssp CEE--CCC----------------SSSEEEEECSSS-CHHHHHHHHHTTTEECEECGGG---------------------
T ss_pred CEE--CCC----------------CCeEEEEECCCC-CHHHHHHHHHHCCEEEEECccC---------------------
Confidence 432 221 456788887543 4567777777778887765421
Q ss_pred CCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 307 RGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 307 ~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
| ++.+|||++. ++.++.+.++|+
T Consensus 339 -~--~~~iRis~~~---~~~i~~l~~~l~ 361 (365)
T 3get_A 339 -G--LNAIRITIGT---SYENEKFFTEFD 361 (365)
T ss_dssp -T--CSEEEEECCC---HHHHHHHHHHHH
T ss_pred -C--CCEEEEEcCC---HHHHHHHHHHHH
Confidence 1 4789999983 333444444444
No 67
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.82 E-value=1.1e-19 Score=170.99 Aligned_cols=241 Identities=13% Similarity=0.082 Sum_probs=153.9
Q ss_pred HHHHHHHHhHhC--------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 58 DALESLLAKLDK--------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 58 ~~le~~la~~~g--------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
.++++.++++++ .+++++++||++|+.+++ .+++|||+|+++.+.|.+....+.
T Consensus 61 ~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~ 140 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGGINL 140 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTSCCH
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCCCCH
Confidence 345555555543 457889999999998644 578999999999998887653322
Q ss_pred --------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-----cc-c---CCCeEEEec
Q 019543 112 --------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-----PL-E---LGADIVMHS 150 (339)
Q Consensus 112 --------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-----~~-~---~~~Di~~~S 150 (339)
++|+++|++||+++|+|++|+...... ++ . .+.++++.|
T Consensus 141 ~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s 220 (377)
T 3fdb_A 141 HDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITA 220 (377)
T ss_dssp HHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEEC
T ss_pred HHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEe
Confidence 788888999999999999997643321 11 1 133599999
Q ss_pred cccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHHHHHhC-CC
Q 019543 151 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HP 225 (339)
Q Consensus 151 ~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~~L~~-~~ 225 (339)
+||++|.+| ...|++++.++++.+.++......+...++...+.+...++. ++.+.++..++.+++.+.|++ +|
T Consensus 221 ~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 299 (377)
T 3fdb_A 221 PSKAWNIAG-LKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIP 299 (377)
T ss_dssp STTTTTCGG-GCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred ChHhccCcc-hhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 999997655 345676665567777777655444456677665554444443 456677778888899999987 67
Q ss_pred CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC-cceeecccCCcccceeccccccCCCCCHHHH
Q 019543 226 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVR 304 (339)
Q Consensus 226 ~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~ 304 (339)
++..+ .| ..+.++++.+.+.....++++.|. ..|+.++.|..+..
T Consensus 300 ~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----------------- 345 (377)
T 3fdb_A 300 GAKIT-PM----------------QATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGE----------------- 345 (377)
T ss_dssp TCEEC-CC----------------SBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCG-----------------
T ss_pred CceEe-cC----------------CeeEEEEEECcccCCCHHHHHHHHHhCCEEecCChhccC-----------------
Confidence 66421 12 123344676643211123444443 34888776643211
Q ss_pred HhCCCCCCeEEEEeccC--CHHHHHHHHHHHHhcC
Q 019543 305 QARGLTEDLVRISVGIE--DVNDLISDLDKALRTG 337 (339)
Q Consensus 305 ~~~g~~~~~lRisvg~e--~~~~li~~l~~al~~~ 337 (339)
..++.+|||++.. +.++.++.|.+++++.
T Consensus 346 ----~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 346 ----DGTGFCRLNFATSREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp ----GGTTEEEEECCSCHHHHHHHHHHHHHHHTTC
T ss_pred ----CCCCEEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 0347899999962 2334455566666543
No 68
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.82 E-value=3.6e-19 Score=167.85 Aligned_cols=239 Identities=18% Similarity=0.107 Sum_probs=166.7
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHHH-h-cCCCCEEEEcCCCccchHHHH----H---------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAVTH-L-LGTGEEIVAGDDLYGGTDRLL----S--------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il~-l-l~~GD~Vi~~~~~y~~~~~~~----~--------------- 111 (339)
+..+++++.+++++|.+ ++++++||++|+.+++. + +++||+|+++++.|++....+ +
T Consensus 59 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 138 (390)
T 1elu_A 59 QLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATL 138 (390)
T ss_dssp HHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGS
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCC
Confidence 56889999999999976 68888999999986554 6 789999999999998754211 1
Q ss_pred -----------------------------------HHHHHHHH----HcCCEEEEeCCcCCCCCcCcc-cCCCeEEEecc
Q 019543 112 -----------------------------------RKIAEMAH----AHGALLLVDNSIMSPVLSRPL-ELGADIVMHSA 151 (339)
Q Consensus 112 -----------------------------------~~I~~la~----~~g~~livD~a~a~g~~~~~~-~~~~Di~~~S~ 151 (339)
++|.++|+ +||+++|+|++|+.|.....+ ..+.|++++|+
T Consensus 139 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~ 218 (390)
T 1elu_A 139 NQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTG 218 (390)
T ss_dssp SSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEES
T ss_pred CccchHHHHHHhcCCCceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccc
Confidence 99999999 999999999999876542212 34679999999
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHH----------------------HHhcCCCCChHHHH---HHHhchhh---H
Q 019543 152 TKFIAGHSDVMAGVLAVKGERLAKELYFL----------------------QNAEGSGLAPFDCW---ICLRGVKT---M 203 (339)
Q Consensus 152 sK~l~g~~~~~gG~v~~~~~~l~~~l~~~----------------------~~~~~~~~~~~~a~---~~~~~l~~---~ 203 (339)
+|++.++.+ .|++++++ ++.+.++.. ........++...+ .++..++. +
T Consensus 219 ~K~~~~~~g--~G~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~ 295 (390)
T 1elu_A 219 HKWFAGPAG--VGGLYIHG-DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTA 295 (390)
T ss_dssp SSTTCCCTT--CEEEEECT-TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCH
T ss_pred cccccCCCc--eEEEEECH-HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 996654422 47888875 565554321 11112233443322 22333323 5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCC
Q 019543 204 ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGS 283 (339)
Q Consensus 204 ~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~ 283 (339)
+...++..++++++.+.|+++++++.+ .|. .+.++++.|.+.......++.+.|...|+.++.|.
T Consensus 296 ~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~--------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~ 360 (390)
T 1elu_A 296 EERYQAICQRSEFLWRGLNQLPHVHCL-ATS--------------APQAGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA 360 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTEEES-CSS--------------CCSSSEEEEEECSSSCHHHHHHHHHHTTEECEEET
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEe-cCc--------------cccccEEEEEcCCCCCHHHHHHHHHHCCEEEEecC
Confidence 566777888899999999988776432 221 12567888887422234567777766677765432
Q ss_pred cccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 284 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 284 ~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
.++.+|||++...+++.++.+.++|+++
T Consensus 361 --------------------------~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 361 --------------------------DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp --------------------------TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred --------------------------CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 1367999999888888899999999864
No 69
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.82 E-value=1.6e-18 Score=162.61 Aligned_cols=233 Identities=15% Similarity=0.109 Sum_probs=159.9
Q ss_pred CchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCC-CEEEEcCCCccchHHHHH------------------
Q 019543 54 NPTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTG-EEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~G-D~Vi~~~~~y~~~~~~~~------------------ 111 (339)
.+...+|++.+|+++|.+ ++++++++++|+.+++ .+++|| |+|+++.+.|++....+.
T Consensus 57 ~~~~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d 136 (356)
T 1fg7_A 57 ECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLD 136 (356)
T ss_dssp CSSCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCC
T ss_pred CccHHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCC
Confidence 344789999999999864 5666666689997644 578899 999999998887654322
Q ss_pred --------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcc----cCCCeEEEeccccc
Q 019543 112 --------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPL----ELGADIVMHSATKF 154 (339)
Q Consensus 112 --------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~----~~~~Di~~~S~sK~ 154 (339)
++|+++|+ +|+++|+|++|+.... .... ..+.++++.|+||+
T Consensus 137 ~~~l~~~i~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 215 (356)
T 1fg7_A 137 LQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKA 215 (356)
T ss_dssp HHHHHTSCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSST
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHh
Confidence 56666677 9999999999975431 1111 13457999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh-----HHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~-----~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
++.+|. ..|+++++ +++++.++..+. .+..++...+.+...|+. ++.+.++..++.+++.+.|++++++..
T Consensus 216 ~g~~G~-r~G~~~~~-~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 291 (356)
T 1fg7_A 216 FALAGL-RCGFTLAN-EEVINLLMKVIA--PYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQ 291 (356)
T ss_dssp TCCGGG-CCEEEEEC-HHHHHHHHHHSC--SSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred hcCchh-hhEEEEeC-HHHHHHHHHhcC--CCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 986553 45788775 467777765432 235666665555554543 455566677888899999988875422
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeeccc-CCcccceeccccccCCCCCHHHHHhCC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSF-GSVKSLISMPCFMSHASIPVEVRQARG 308 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~-G~~~s~~~~p~~~~h~~~~~~~~~~~g 308 (339)
..|. .+..+++.++ ...++.+.|...|+.++. |..+ |
T Consensus 292 -~~~~----------------~~~~~~~~~~---~~~~l~~~L~~~gI~v~~~g~~~----------------------~ 329 (356)
T 1fg7_A 292 -VFDS----------------ETNYILARFK---ASSAVFKSLWDQGIILRDQNKQP----------------------S 329 (356)
T ss_dssp -ECCC----------------SSSEEEEEET---THHHHHHHHHHTTEECEECTTST----------------------T
T ss_pred -ECCC----------------CCeEEEEECC---CHHHHHHHHHHCCEEEEECCCCC----------------------C
Confidence 2332 3567788776 345677777777888775 4321 1
Q ss_pred CCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 309 LTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 309 ~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
.++.+|||++. ++.++.+.++|+++
T Consensus 330 -~~~~iRis~~~---~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 330 -LSGCLRITVGT---REESQRVIDALRAE 354 (356)
T ss_dssp -CTTEEEEECCC---HHHHHHHHHHHHTC
T ss_pred -CCCeEEEEeCC---HHHHHHHHHHHHhh
Confidence 13589999983 45677888888764
No 70
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.82 E-value=3.8e-19 Score=168.22 Aligned_cols=242 Identities=14% Similarity=0.123 Sum_probs=159.5
Q ss_pred hHHHHHHHHHhHh----C----CCe-EEEcCcHHHHHHHHHH-hcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 56 TRDALESLLAKLD----K----ADR-ALCFTSGMAALAAVTH-LLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~----g----~~~-~l~~~sG~~A~~~il~-ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
...+|++.+++++ | .++ +++++||++|+.+++. ++++||+|+++++.|++....+.
T Consensus 64 g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 143 (389)
T 1gd9_A 64 GLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEE 143 (389)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGG
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCc
Confidence 3567777777776 6 356 8888899999986554 78999999999998877643222
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C---cc-c----CC
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R---PL-E----LG 143 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~---~~-~----~~ 143 (339)
++|+++|++||+++|+|++|+.+... . .+ . .+
T Consensus 144 ~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 223 (389)
T 1gd9_A 144 DEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFE 223 (389)
T ss_dssp GTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGG
T ss_pred cCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCC
Confidence 88999999999999999999865432 1 11 1 24
Q ss_pred CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh------HHHHHHHHHHHHHHH
Q 019543 144 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKI 217 (339)
Q Consensus 144 ~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~------~~~r~~~~~~~a~~l 217 (339)
.|++++|+||+++.+| ...|+++++ +++++.++......+...++...+.+...|+. ++...++..++.+++
T Consensus 224 ~~i~~~s~sK~~~~~G-~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 301 (389)
T 1gd9_A 224 RTITVNGFSKTFAMTG-WRLGFVAAP-SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLV 301 (389)
T ss_dssp GEEEEEESTTTTTCGG-GCCEEEECC-HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEecChhhcCCcc-cceEEEEEC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHH
Confidence 6899999999998655 445788876 47778777665444455566554444444432 344566667888888
Q ss_pred HHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCC-cceeecccCCcccceecccccc
Q 019543 218 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTK-YFSITVSFGSVKSLISMPCFMS 295 (339)
Q Consensus 218 ~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~~ 295 (339)
.+.|+++ +++.+ .| ..+.++++.+.+ .....++.+.|. ..|+.+..|..+. +
T Consensus 302 ~~~L~~~-g~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~---- 355 (389)
T 1gd9_A 302 WKRLNEM-GLPTV-KP----------------KGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFG----K---- 355 (389)
T ss_dssp HHHHHHT-TCCCC-CC----------------CBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGC----G----
T ss_pred HHHHHHc-CCeec-CC----------------CeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhC----C----
Confidence 8888876 44321 11 123345666632 123456777775 6788877654321 0
Q ss_pred CCCCCHHHHHhCCCCCCeEEEEecc--CCHHHHHHHHHHHHhcCC
Q 019543 296 HASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTGP 338 (339)
Q Consensus 296 h~~~~~~~~~~~g~~~~~lRisvg~--e~~~~li~~l~~al~~~~ 338 (339)
..++.+|||++. ++.++.++.|.+++++.+
T Consensus 356 -------------~~~~~iRi~~~~~~~~i~~~l~~l~~~~~~~~ 387 (389)
T 1gd9_A 356 -------------AGEGYVRISYATAYEKLEEAMDRMERVLKERK 387 (389)
T ss_dssp -------------GGTTBEEEECCSCHHHHHHHHHHHHHHHHHTT
T ss_pred -------------CCCCeEEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence 024679999986 223344556666665543
No 71
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.82 E-value=2.6e-19 Score=167.07 Aligned_cols=235 Identities=11% Similarity=0.086 Sum_probs=161.1
Q ss_pred CCchHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH------------------
Q 019543 53 GNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
.++...+|++++++++|. +++++++||++|+.+++ .++++||+|+++.+.|.+....++
T Consensus 49 ~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d 128 (354)
T 3ly1_A 49 AKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFD 128 (354)
T ss_dssp CHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCC
T ss_pred CCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 346778999999999995 57888888899998654 478999999999999887654332
Q ss_pred --------------------------------HHHHHHHHH--cCCEEEEeCCcCCCCCcC----cc----cC-CCeEEE
Q 019543 112 --------------------------------RKIAEMAHA--HGALLLVDNSIMSPVLSR----PL----EL-GADIVM 148 (339)
Q Consensus 112 --------------------------------~~I~~la~~--~g~~livD~a~a~g~~~~----~~----~~-~~Di~~ 148 (339)
++|.++++. ||+++|+|++|+...... .. .. +.++++
T Consensus 129 ~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 208 (354)
T 3ly1_A 129 IEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILL 208 (354)
T ss_dssp HHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEE
T ss_pred HHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEE
Confidence 566666666 999999999997543321 11 12 456999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCC
Q 019543 149 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 149 ~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
+|+||+++.+| ...|+++++ +++.+.++..... ...++...+.+...++ .+..+.++..++.+++.+.|+++
T Consensus 209 ~s~sK~~g~~G-~r~G~~~~~-~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~- 283 (354)
T 3ly1_A 209 KTFSKIHAMAG-MRVGYAVAH-PTVIALMGRYVAG--EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL- 283 (354)
T ss_dssp EESSSTTCCGG-GCCEEEECC-HHHHHHHGGGTTC--SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred eeChhhccChh-hhheeeecC-HHHHHHHHHhcCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 99999997555 456788775 4677776654432 4556665554444443 35666777788888999988876
Q ss_pred CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHH
Q 019543 226 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 305 (339)
Q Consensus 226 ~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~ 305 (339)
++.. +| +.+.++++.+.+ ...++.+.|...|+.++ |.+. .
T Consensus 284 ~~~~--~~----------------~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~-g~~~-----~-------------- 323 (354)
T 3ly1_A 284 KLPY--LP----------------SEGNFVFHQLVV--PLKDYQTHMADAGVLIG-RAFP-----P-------------- 323 (354)
T ss_dssp TCCB--CC----------------CCSSEEEEECSS--CHHHHHHHHHHTTEECC-CCCT-----T--------------
T ss_pred CCeE--CC----------------CCceEEEEECCC--CHHHHHHHHHHCCEEEe-ecCC-----C--------------
Confidence 3321 12 145678888764 34567777777788887 5421 0
Q ss_pred hCCCCCCeEEEEeccC-CHHHHHHHHHHHHhc
Q 019543 306 ARGLTEDLVRISVGIE-DVNDLISDLDKALRT 336 (339)
Q Consensus 306 ~~g~~~~~lRisvg~e-~~~~li~~l~~al~~ 336 (339)
.++.+|||++.+ +.+.+++.|.+++++
T Consensus 324 ----~~~~iRis~~~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 324 ----ADNWCRISLGTPQEMQWVADTMREFRKK 351 (354)
T ss_dssp ----CTTEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred ----CCCEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 347899999842 345556666666554
No 72
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.82 E-value=1.2e-18 Score=166.17 Aligned_cols=240 Identities=13% Similarity=0.064 Sum_probs=159.7
Q ss_pred chHHHHHHHHHhHh----CC-----CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------
Q 019543 55 PTRDALESLLAKLD----KA-----DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~----g~-----~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
+...+|++.+++++ |. +.++++++|++|+.+++ .+++|||+|+++.+.|++....+.
T Consensus 85 ~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~ 164 (404)
T 2o1b_A 85 HGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP 164 (404)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc
Confidence 34677888888877 74 36777778899998644 578999999999998887654332
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C---cccC----CC
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R---PLEL----GA 144 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~---~~~~----~~ 144 (339)
++|+++|++||++||+|++|+.+... . .... +.
T Consensus 165 ~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 244 (404)
T 2o1b_A 165 PHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDV 244 (404)
T ss_dssp TTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHH
T ss_pred ccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCC
Confidence 78999999999999999999865431 1 1222 34
Q ss_pred eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEF 220 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~~ 220 (339)
+++++|+||+++.+| ...|+++++ +++++.++......+...++...+.+...|+. ++...++..++.+++.+.
T Consensus 245 ~i~~~s~sK~~g~~G-~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 322 (404)
T 2o1b_A 245 AIEIYSLSKGYNMSG-FRVGFAVGN-KDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAM 322 (404)
T ss_dssp EEEEEESTTTTTCGG-GCCEEEEEC-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecchhccCch-hheEeEecC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999998655 446788776 47888887766655556676665555444443 455566677788889899
Q ss_pred HhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC-cceeecccCCcccceeccccccCCCC
Q 019543 221 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASI 299 (339)
Q Consensus 221 L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~~h~~~ 299 (339)
|+++ +++. ..| ..+.++++.+.+.....++++.|. ..|+.++.|..+..
T Consensus 323 L~~~-g~~~-~~~----------------~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~------------ 372 (404)
T 2o1b_A 323 LAKA-DLPF-VHA----------------KGGIYVWLETPPGYDSEQFEQFLVQEKSILVAPGKPFGE------------ 372 (404)
T ss_dssp HHHT-TCCE-ECC----------------CBSSEEEEECCTTCCHHHHHHHHHHHHCEECEESGGGCG------------
T ss_pred HHhc-CCee-cCC----------------CcceEEEEeCCCCCCHHHHHHHHHHHCCEEEeCchhhCc------------
Confidence 9876 4432 212 023347777753323456777654 56888876643210
Q ss_pred CHHHHHhCCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Q 019543 300 PVEVRQARGLTEDLVRISVGIE--DVNDLISDLDKALR 335 (339)
Q Consensus 300 ~~~~~~~~g~~~~~lRisvg~e--~~~~li~~l~~al~ 335 (339)
..++.+|||++.. +.++.++.|.++++
T Consensus 373 ---------~~~~~iRis~~~~~e~l~~~l~~l~~~l~ 401 (404)
T 2o1b_A 373 ---------NGNRYVRISLALDDQKLDEAAIRLTELAY 401 (404)
T ss_dssp ---------GGTTEEEEECCSCTTHHHHHHHHHHGGGG
T ss_pred ---------CCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 0246899999962 23333444444443
No 73
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.82 E-value=1.3e-18 Score=166.11 Aligned_cols=241 Identities=11% Similarity=0.031 Sum_probs=159.7
Q ss_pred chHHHHHHHHHhHh----CC-----CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------
Q 019543 55 PTRDALESLLAKLD----KA-----DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~----g~-----~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
+...+|++.+++++ |. +++++++||++|+.+++ .+++|||+|+++++.|++....+.
T Consensus 75 ~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 154 (412)
T 2x5d_A 75 RGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVP 154 (412)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECST
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCC
Confidence 34678888888877 63 47888999999998654 478999999999998876543221
Q ss_pred ----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cC---c-cc----C
Q 019543 112 ----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SR---P-LE----L 142 (339)
Q Consensus 112 ----------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~---~-~~----~ 142 (339)
++|+++|++||+++|+|++|+.+.+ +. . .. .
T Consensus 155 ~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 234 (412)
T 2x5d_A 155 GIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAK 234 (412)
T ss_dssp TSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGG
T ss_pred ccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCcc
Confidence 7899999999999999999986543 11 1 11 2
Q ss_pred CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHH
Q 019543 143 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIA 218 (339)
Q Consensus 143 ~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~ 218 (339)
+.|++++|+||+++.+|. ..|+++++ +++++.+.......+...++...+.+...|+. ++...++..++.+++.
T Consensus 235 ~~~i~~~s~sK~~~~~G~-r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~ 312 (412)
T 2x5d_A 235 DIAVEFFTLSKSYNMAGW-RIGFMVGN-PELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLV 312 (412)
T ss_dssp GTEEEEEECC-CCSCTTS-CCEEEEEC-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEecCccccCCccc-ceEEEEcC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 568999999999986553 45788776 47888887766555566676655544444432 4556666778888888
Q ss_pred HHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHH---HHHHHHccCC-cceeecccCCcccceeccccc
Q 019543 219 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA---LSKHVVETTK-YFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 219 ~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~---~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~ 294 (339)
+.|+++ ++.. ++. ..+.++++.++... ...++++.|. ..|+.++.|..+. +
T Consensus 313 ~~L~~~-g~~~--~~~---------------~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~----~--- 367 (412)
T 2x5d_A 313 KGLREA-GWMV--ENP---------------KASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFG----D--- 367 (412)
T ss_dssp HHHHHH-TCCC--CCC---------------SBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGC----G---
T ss_pred HHHHHC-CCEe--cCC---------------CeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhC----C---
Confidence 888875 3321 110 02346777774321 3456777774 4688887664321 0
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEeccC--CHHHHHHHHHHHHhc
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVGIE--DVNDLISDLDKALRT 336 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg~e--~~~~li~~l~~al~~ 336 (339)
..++.+|||++.. +.++.++.|.+++++
T Consensus 368 --------------~~~~~iRis~~~~~~~l~~~l~~l~~~l~~ 397 (412)
T 2x5d_A 368 --------------YGDDHVRFALIENRDRLRQAVRGIKAMFRA 397 (412)
T ss_dssp --------------GGTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred --------------CCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 0247899999972 223334555555543
No 74
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.82 E-value=1.4e-18 Score=168.15 Aligned_cols=241 Identities=14% Similarity=0.120 Sum_probs=159.7
Q ss_pred hHHHHHHHHHhHh----CC---CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHH-----------------
Q 019543 56 TRDALESLLAKLD----KA---DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLL----------------- 110 (339)
Q Consensus 56 ~~~~le~~la~~~----g~---~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~----------------- 110 (339)
...+|++.+++++ |. ++++++++|++|+..++ .+++|||+|+++.+.|.+....+
T Consensus 119 g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g~ 198 (448)
T 3aow_A 119 GFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEGM 198 (448)
T ss_dssp CCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEE
T ss_pred CcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCCCC
Confidence 4567888888877 75 57778888899998654 47899999999999886543111
Q ss_pred -----------------H-----------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C---cc-c---C
Q 019543 111 -----------------S-----------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R---PL-E---L 142 (339)
Q Consensus 111 -----------------~-----------------------~~I~~la~~~g~~livD~a~a~g~~~-~---~~-~---~ 142 (339)
+ ++|+++|++||++||+|++|+.+.+. . .+ . .
T Consensus 199 d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~ 278 (448)
T 3aow_A 199 KVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNE 278 (448)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTT
T ss_pred CHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCC
Confidence 1 78999999999999999999865431 1 11 1 2
Q ss_pred CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh------HHHHHHHHHHHHHH
Q 019543 143 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQK 216 (339)
Q Consensus 143 ~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~------~~~r~~~~~~~a~~ 216 (339)
+.++++.||||+++ +| ...|+++++ +++++.+...........+++..+++...|+. +....++..++.++
T Consensus 279 ~~vi~~~S~SK~~~-~G-lriG~v~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~ 355 (448)
T 3aow_A 279 GRVIYLGTFSKILA-PG-FRIGWMVGD-PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDA 355 (448)
T ss_dssp SCEEEEEESTTTTC-GG-GCCEEEEEC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEccchhhcc-cc-ccEEEEEeC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 45799999999998 55 456788887 47888887665443344466555444444432 34445556677888
Q ss_pred HHHHHhC-CC-CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccc
Q 019543 217 IAEFLAS-HP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 217 l~~~L~~-~~-~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~ 294 (339)
+.+.|++ .| +++. ..| ..|..+++.+.+.....++++.|...|+.+..|..+. +.
T Consensus 356 l~~~L~~~~~~g~~~-~~p----------------~~g~~~~v~~~~~~~~~~l~~~l~~~gV~v~pg~~f~----~~-- 412 (448)
T 3aow_A 356 MLEALEEFMPEGVKW-TKP----------------EGGMFIWVTLPDGIDSKKMLERAIKKGVAYVPGEAFY----AH-- 412 (448)
T ss_dssp HHHHHHHHCCTTCEE-CCC----------------SBSSEEEEECSTTCCHHHHHHHHHHTTEECEEGGGGS----TT--
T ss_pred HHHHHHHhCCCCeEE-eCC----------------CccEEEEEEcCCCCCHHHHHHHHHHCCcEEEcchhhc----CC--
Confidence 8888876 45 4542 222 1355778887532234567777766688877664321 10
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEeccC---CHHHHHHHHHHHHh
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVGIE---DVNDLISDLDKALR 335 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg~e---~~~~li~~l~~al~ 335 (339)
+..++.+|||++.. +.++.++.|.++++
T Consensus 413 -------------~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~ 443 (448)
T 3aow_A 413 -------------RDVKNTMRLNFTYVDEDKIMEGIKRLAETIK 443 (448)
T ss_dssp -------------CCCCSEEEEECSSSCTHHHHHHHHHHHHHHH
T ss_pred -------------CCCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 01347899999863 34555666666654
No 75
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.82 E-value=3.5e-18 Score=161.79 Aligned_cols=242 Identities=14% Similarity=0.103 Sum_probs=158.9
Q ss_pred chHHHHHHHHHhHhC-----CC-eEEEcCcHHHHHHHHH-HhcCCC-----CEEEEcCCCccchHHHHH-----------
Q 019543 55 PTRDALESLLAKLDK-----AD-RALCFTSGMAALAAVT-HLLGTG-----EEIVAGDDLYGGTDRLLS----------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g-----~~-~~l~~~sG~~A~~~il-~ll~~G-----D~Vi~~~~~y~~~~~~~~----------- 111 (339)
+.++++.+.+++.+| .+ +++++++|++|+.+++ .++++| |+|+++.+.|++....+.
T Consensus 70 ~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~ 149 (396)
T 3jtx_A 70 ELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC 149 (396)
T ss_dssp HHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec
Confidence 344555555555545 44 7888888899998654 578897 799999999887654432
Q ss_pred -----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--cc--------
Q 019543 112 -----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR--PL-------- 140 (339)
Q Consensus 112 -----------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~--~~-------- 140 (339)
++|+++|++||+++|+|++|+...... +.
T Consensus 150 ~~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 229 (396)
T 3jtx_A 150 PAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQ 229 (396)
T ss_dssp CTTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHH
T ss_pred CCCCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhh
Confidence 679999999999999999997644321 11
Q ss_pred ---cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch---hhHHHHHHHHHHHH
Q 019543 141 ---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNA 214 (339)
Q Consensus 141 ---~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l---~~~~~r~~~~~~~a 214 (339)
..+.++++.|+||.++.+| ...|+++++ +++.+.+.......+...++...+++...+ +.+..+.++..++.
T Consensus 230 ~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 307 (396)
T 3jtx_A 230 LGRSRQKLLMFTSLSKRSNVPG-LRSGFVAGD-AELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKF 307 (396)
T ss_dssp TTCCCTTEEEEEESTTTSSCGG-GCCEEEEEC-HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred cccccCcEEEEeccccccCCcc-cceEEEEeC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 1456799999999987665 445678775 478888887776666777776655544444 34566667777888
Q ss_pred HHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcccceecccc
Q 019543 215 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCF 293 (339)
Q Consensus 215 ~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~ 293 (339)
+++.+.|+.+.. +..| ..+.++++.+.+ ....++++.| +..|+.++.|..+..-
T Consensus 308 ~~l~~~l~~~~~---~~~~----------------~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~----- 362 (396)
T 3jtx_A 308 ERVIPILQQVFD---VKLP----------------DASFYIWLKVPD-GDDLAFARNLWQKAAIQVLPGRFLARD----- 362 (396)
T ss_dssp HHHHHHHTTTSC---CCCC----------------SSSSEEEEECTT-SCHHHHHHHHHHHHCEECEEGGGGCCC-----
T ss_pred HHHHHHHHhcCC---ccCC----------------CeeEEEEEECCC-CCHHHHHHHHHHHCCEEEeCChHhCCc-----
Confidence 888888876521 1111 135577787754 2345666666 4568988877543221
Q ss_pred ccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 294 MSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 294 ~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.+.. +..++.+|||++. +++.++.+.++|+
T Consensus 363 -~~~~---------~~~~~~iRis~~~--~~~~i~~~l~~l~ 392 (396)
T 3jtx_A 363 -TEQG---------NPGEGYVRIALVA--DVATCVKAAEDIV 392 (396)
T ss_dssp -CTTC---------CTTTTEEEEECCS--CHHHHHHHHHHHH
T ss_pred -cccc---------CCCCCeEEEEEcC--CHHHHHHHHHHHH
Confidence 0100 1245789999987 3343444444443
No 76
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.82 E-value=7e-19 Score=164.14 Aligned_cols=238 Identities=14% Similarity=0.114 Sum_probs=162.1
Q ss_pred CCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.++...+|++++++++|.+ +++++++|++|+.+++..+. ||+|+++.+.|.+....++
T Consensus 48 ~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~-gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 126 (350)
T 3fkd_A 48 PEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR-GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEAD 126 (350)
T ss_dssp CCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT-TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSC
T ss_pred CCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC-CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCc
Confidence 3444579999999999864 67788888999987665444 9999999999987765443
Q ss_pred ----------------------HHHHHHHHHcC-CEEEEeCCcCCCCCcCc-----c-cCCCeEEEeccccccccCCCce
Q 019543 112 ----------------------RKIAEMAHAHG-ALLLVDNSIMSPVLSRP-----L-ELGADIVMHSATKFIAGHSDVM 162 (339)
Q Consensus 112 ----------------------~~I~~la~~~g-~~livD~a~a~g~~~~~-----~-~~~~Di~~~S~sK~l~g~~~~~ 162 (339)
++|.++++.++ .+||+|++|+....... . ..+.+++++|+||+++.+| ..
T Consensus 127 ~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r 205 (350)
T 3fkd_A 127 FSNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPG-LR 205 (350)
T ss_dssp CTTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGG-GC
T ss_pred cCCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcc-hh
Confidence 77888888876 79999999975433211 1 2244699999999998655 45
Q ss_pred EEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCC
Q 019543 163 AGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 239 (339)
Q Consensus 163 gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~ 239 (339)
.|+++++ +++.+.++.... ....++...+++...|+. +.+++++..++.+++.+.|+++|++.. +|.
T Consensus 206 ~G~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~----- 275 (350)
T 3fkd_A 206 IGYIVAN-KDFMKRVAAFST--PWAVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEV--HPS----- 275 (350)
T ss_dssp CEEEECC-HHHHHHHHTTCC--TTCSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEE--CCC-----
T ss_pred eEeEEeC-HHHHHHHHHhCC--CCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE--CCC-----
Confidence 6788774 577777665432 345666665555444443 334455555888899999988877653 231
Q ss_pred chHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCc-ceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe
Q 019543 240 GHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 318 (339)
Q Consensus 240 ~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~-~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv 318 (339)
.+..+++.++.. ...++.+.|.. .|+.++.|..+. + ..++.+|||+
T Consensus 276 -----------~~~~~~~~~~~~-~~~~l~~~L~~~~gi~v~~g~~f~----~-----------------~~~~~iRis~ 322 (350)
T 3fkd_A 276 -----------GTTFFLLRLKKG-TAAELKKYMLEEYNMLIRDASNFR----G-----------------LDESYVRITT 322 (350)
T ss_dssp -----------SSSEEEEEESSS-CHHHHHHHHHHTTCEECEECTTST----T-----------------CCTTEEEEEC
T ss_pred -----------CCcEEEEECCCC-CHHHHHHHHHHHCCEEEEeCccCC----C-----------------CCCCEEEEEc
Confidence 456777777543 45678888876 899888775321 0 2457899999
Q ss_pred ccCC-HHHHHHHHHHHHh
Q 019543 319 GIED-VNDLISDLDKALR 335 (339)
Q Consensus 319 g~e~-~~~li~~l~~al~ 335 (339)
+.++ .+.+++.|.+.++
T Consensus 323 ~~~~~~~~l~~al~~~~~ 340 (350)
T 3fkd_A 323 QRPAQNQLFIKALETFLE 340 (350)
T ss_dssp CCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 9533 3455555555443
No 77
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.82 E-value=8.9e-19 Score=165.57 Aligned_cols=208 Identities=14% Similarity=0.117 Sum_probs=139.7
Q ss_pred HHHHHHHHHhHh----C----CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 57 RDALESLLAKLD----K----ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~----g----~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
..++++.+++++ | .+++++++||++|+.+++ .+++|||+|+++++.|++....++
T Consensus 69 ~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 148 (388)
T 1j32_A 69 EPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQ 148 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGT
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccC
Confidence 556777777665 3 246777888899998654 478999999999998876543322
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C----ccc-----CCC
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R----PLE-----LGA 144 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~----~~~-----~~~ 144 (339)
++|+++|++||+++|+|++|+.+... . ... .+.
T Consensus 149 ~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (388)
T 1j32_A 149 FKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYER 228 (388)
T ss_dssp TCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHT
T ss_pred CCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCC
Confidence 89999999999999999999765431 1 111 346
Q ss_pred eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEF 220 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~ 220 (339)
|+++.|+||+++.+| ...|++++++ ++.+.++......+...++...+.+...|+ .++...++..++.+++.+.
T Consensus 229 ~~~~~s~sK~~~~~G-~r~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 306 (388)
T 1j32_A 229 SVVCSGFAKTYAMTG-WRVGFLAGPV-PLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDA 306 (388)
T ss_dssp EEEEEESTTTTTCTT-TCCEEEECCH-HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeechhccCCcc-cceEEEEeCH-HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence 899999999997665 3457887764 677877776655455666665544433333 3556677777888999999
Q ss_pred HhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCCc-ceeecccCC
Q 019543 221 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKY-FSITVSFGS 283 (339)
Q Consensus 221 L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~~-~~i~v~~G~ 283 (339)
|+++++++.+ .| ..+.++++.+.. .....++.+.|.. .|+.++.|.
T Consensus 307 L~~~~g~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 354 (388)
T 1j32_A 307 LNAMPGLECP-KP----------------DGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGA 354 (388)
T ss_dssp HHTCTTCBCC-CC----------------CBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGG
T ss_pred HhhCCCCccc-CC----------------CeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChh
Confidence 9988765421 11 012334444431 1134567777754 688877553
No 78
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.81 E-value=9.1e-19 Score=168.11 Aligned_cols=244 Identities=16% Similarity=0.104 Sum_probs=160.8
Q ss_pred HHHHHHHHHhHhC--------CCeEEEcCcHHHHHHHHH-Hhc--CCCC--EEEEcCCCccchHHHHH------------
Q 019543 57 RDALESLLAKLDK--------ADRALCFTSGMAALAAVT-HLL--GTGE--EIVAGDDLYGGTDRLLS------------ 111 (339)
Q Consensus 57 ~~~le~~la~~~g--------~~~~l~~~sG~~A~~~il-~ll--~~GD--~Vi~~~~~y~~~~~~~~------------ 111 (339)
..++++.++++++ .++++++++|++|+.+++ .++ ++|| +|+++.+.|.+....+.
T Consensus 84 ~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~ 163 (437)
T 3g0t_A 84 LPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF 163 (437)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG
T ss_pred hHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec
Confidence 4788888888876 457888888899998655 477 9999 99999998876543222
Q ss_pred -----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--cc--------
Q 019543 112 -----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR--PL-------- 140 (339)
Q Consensus 112 -----------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~--~~-------- 140 (339)
++|+++|++||++||+|++|+...+.. +.
T Consensus 164 ~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (437)
T 3g0t_A 164 EYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQP 243 (437)
T ss_dssp GGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCC
T ss_pred CCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhh
Confidence 778999999999999999997543321 11
Q ss_pred ----cCCCeEEEeccccccccCCCceEEEEEEcChhHHH-H-----------------HHHHHHhcCCCCChHHHHHHHh
Q 019543 141 ----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK-E-----------------LYFLQNAEGSGLAPFDCWICLR 198 (339)
Q Consensus 141 ----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~-~-----------------l~~~~~~~~~~~~~~~a~~~~~ 198 (339)
..+.+++++|+||.++.+| ...|++++++ ++++ . +...........++...+++..
T Consensus 244 ~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 321 (437)
T 3g0t_A 244 SVANYTDNYILALSSSKAFSYAG-QRIGVLMISG-KLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAA 321 (437)
T ss_dssp CGGGTCSCEEEEEESTTTTSCGG-GCCEEEEECH-HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHH
T ss_pred ccCCCCCcEEEEEcCccCCCCcc-ceeEEEEECH-HHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHH
Confidence 1345699999999998655 4467888764 6776 6 6555544455666666555544
Q ss_pred chhh-------HHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHcc
Q 019543 199 GVKT-------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVET 271 (339)
Q Consensus 199 ~l~~-------~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~ 271 (339)
.|+. ++.+.++..++.+++.+.|+++ ++..+ +|.-...| ...+.++++.+.+ ....++.+.
T Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~---------~~~~~~~~~~~~~-~~~~~l~~~ 389 (437)
T 3g0t_A 322 MLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNIV-YDKDGNEP---------LADGFYFTVGYKG-MDSSKLIEK 389 (437)
T ss_dssp HHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEES-SCEETTEE---------CCSSSEEEEEETT-CCHHHHHHH
T ss_pred HHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEEe-ccccCCCC---------CceeEEEEEecCC-CCHHHHHHH
Confidence 4433 5566777888899999999987 55432 10000000 0145677777752 234567777
Q ss_pred CCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEecc---CCHHHHHHHHHHHHh
Q 019543 272 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALR 335 (339)
Q Consensus 272 L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~---e~~~~li~~l~~al~ 335 (339)
|...|+.++.|..+. . ..++.+|||++. ++.+.+++.|.++++
T Consensus 390 L~~~gi~v~~~~~~~------~---------------~~~~~iRis~~~~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 390 FVRYGMCAITLKTTG------S---------------KRNEAMRICTSLLPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp HHHTTEECEESTTTT------C---------------CCTTCEEEECSSSCGGGHHHHHHHHHHHHH
T ss_pred HHHcCeEEeeccccC------C---------------CCCCEEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 777788877553211 0 023679999995 334444555555443
No 79
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.81 E-value=2.8e-19 Score=168.15 Aligned_cols=262 Identities=15% Similarity=0.104 Sum_probs=161.7
Q ss_pred CcccCCCCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-Hhc----CCCCEEEEcCCCccchHHHHH--------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLL----GTGEEIVAGDDLYGGTDRLLS-------- 111 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll----~~GD~Vi~~~~~y~~~~~~~~-------- 111 (339)
|.+++...+..+++++++++++|.+ ++++++||++|+.+++ .+. +|||+|+++++.|++....+.
T Consensus 35 ~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~ 114 (382)
T 4eb5_A 35 HSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFE 114 (382)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCE
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcE
Confidence 3333334567899999999999976 6777888899998644 455 899999999998876543221
Q ss_pred -------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcc-cCCCeEE
Q 019543 112 -------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPL-ELGADIV 147 (339)
Q Consensus 112 -------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~-~~~~Di~ 147 (339)
++|.++|++||++ |+|++|+.|.....+ ..+.|++
T Consensus 115 ~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~ 193 (382)
T 4eb5_A 115 VEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADML 193 (382)
T ss_dssp EEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEE
T ss_pred EEEeccCCCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEE
Confidence 9999999999999 999999876432112 2367999
Q ss_pred EeccccccccCCCceEEEEEEcChh-HHHHHHH---HHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHH
Q 019543 148 MHSATKFIAGHSDVMAGVLAVKGER-LAKELYF---LQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAE 219 (339)
Q Consensus 148 ~~S~sK~l~g~~~~~gG~v~~~~~~-l~~~l~~---~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~ 219 (339)
++|+||+++..| .|+++++++. +...+.. .........+....+.+...++ .++.+.++..++++++.+
T Consensus 194 ~~s~sK~~g~~g---~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~ 270 (382)
T 4eb5_A 194 TISSNDIYGPKG---VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIID 270 (382)
T ss_dssp EEETGGGTCCSS---CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeehHHhcCCCc---eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 999999866433 2566666532 1111000 0111122334333222222222 245567777888999999
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 299 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~ 299 (339)
.|+++++++. ..|. . ...+++++|.+.+. ...++.+.|...|+.++.|..++... +.
T Consensus 271 ~L~~~~~~~~-~~~~--~-----------~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~------~~-- 327 (382)
T 4eb5_A 271 NVLKIEESYL-NGHP--E-----------KRLPNNVNVRFSYI-EGESIVLSLDMAGIQASTGSACSSKT------LQ-- 327 (382)
T ss_dssp HHTTSTTEEE-CSCS--S-----------SBCTTEEEEEETTS-CHHHHHHHHHHHTCBCBCCCGGGTSS------CC--
T ss_pred HHhhCCCeEE-eCCc--c-----------cCCCCEEEEEeCCc-CHHHHHHHHHHCCEEEeccccccCCC------Cc--
Confidence 9998877642 2121 0 01256888887532 34567777777888888775432110 00
Q ss_pred CHHHHHhCCCC----CCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 300 PVEVRQARGLT----EDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 300 ~~~~~~~~g~~----~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+......+|++ ++.+|||++...+++.++.+.++|+
T Consensus 328 ~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 367 (382)
T 4eb5_A 328 PSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLP 367 (382)
T ss_dssp CCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHH
T ss_pred ccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 11122334543 5789999996555554555544443
No 80
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.81 E-value=4.3e-18 Score=161.74 Aligned_cols=261 Identities=14% Similarity=0.094 Sum_probs=172.9
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHH-Hh-cCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVT-HL-LGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il-~l-l~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
++..++||+.+++++|.+++++++||++|+.+++ .+ +++||+|+++++.|.+....+.
T Consensus 31 g~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~ 110 (394)
T 1o69_A 31 GEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVD 110 (394)
T ss_dssp THHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHH
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEEeCCCCCcCHH
Confidence 5779999999999999999999999999998654 46 7999999999998876532221
Q ss_pred ----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcc---c-CCCeEEEeccccccccCC
Q 019543 112 ----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPL---E-LGADIVMHSATKFIAGHS 159 (339)
Q Consensus 112 ----------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~---~-~~~Di~~~S~sK~l~g~~ 159 (339)
++|.++|++||+++|+|++|+.|...... . ..+|+.++|.+|.++|.
T Consensus 111 ~l~~~i~~~~~~~~~v~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~- 189 (394)
T 1o69_A 111 LLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTS- 189 (394)
T ss_dssp HHHHHHHHCSSCCCEEEEECGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCS-
T ss_pred HHHHHHhcccCCceEEEEECCCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCC-
Confidence 89999999999999999999876432211 1 24567777778998753
Q ss_pred CceEEEEEEcChhHHHHHHHHHHhcC--------------CCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCC
Q 019543 160 DVMAGVLAVKGERLAKELYFLQNAEG--------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 160 ~~~gG~v~~~~~~l~~~l~~~~~~~~--------------~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
.+|+++++++++.+.++..+.... ..+++..+++++..++.++++.++.+++++++.+.|++.
T Consensus 190 --~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~- 266 (394)
T 1o69_A 190 --GGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEY- 266 (394)
T ss_dssp --SCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred --CceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence 378998875677777766532110 015667777666667778888888899999999999876
Q ss_pred CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH---------------------HHHHHHHccCCcceeecccCCc
Q 019543 226 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---------------------ALSKHVVETTKYFSITVSFGSV 284 (339)
Q Consensus 226 ~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~---------------------~~~~~~~~~L~~~~i~v~~G~~ 284 (339)
++ + ++. ... ..+...+++|.+++. ....++.+.|...||.++.|..
T Consensus 267 -~~-~-~~~-~~~---------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~ 333 (394)
T 1o69_A 267 -FS-F-LDE-LEN---------SRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWK 333 (394)
T ss_dssp -EE-C-CCC-CTT---------EECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCC
T ss_pred -cc-c-cCC-CCC---------CcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCC
Confidence 32 1 221 100 001123677777521 1456788888778998886642
Q ss_pred ccceeccccccC--CCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 285 KSLISMPCFMSH--ASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 285 ~s~~~~p~~~~h--~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.....|..... ..++.... +..+.+|+..+...+++.++.+.++|++
T Consensus 334 -~~~~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~t~edi~~~~~~l~~ 382 (394)
T 1o69_A 334 -AMHTQEVFKGAKAYLNGNSEL----FFQKGICLPSGTAMSKDDVYEISKLILK 382 (394)
T ss_dssp -CGGGCGGGTTCEEEECSHHHH----HHHHEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred -ccccchhhhccCCCCChHHHH----HhcCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 11111211000 00111100 1124566667888888888888888764
No 81
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.81 E-value=1.8e-18 Score=160.80 Aligned_cols=238 Identities=13% Similarity=0.003 Sum_probs=157.6
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchH--HHHH------------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTD--RLLS------------------ 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~--~~~~------------------ 111 (339)
+..+++++++++++|.+ .+++++||++|+.+++ .+++|||+|+++++.|++.. .++.
T Consensus 34 ~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 113 (352)
T 1iug_A 34 EVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPR 113 (352)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCC
T ss_pred HHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCC
Confidence 45789999999999976 5777888899998644 57899999999999887753 2221
Q ss_pred ---------------------------HHHHHHHHHc--CCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccccCCCc
Q 019543 112 ---------------------------RKIAEMAHAH--GALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDV 161 (339)
Q Consensus 112 ---------------------------~~I~~la~~~--g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g~~~~ 161 (339)
++|.++|++| |+++|+|++|+.+... +....+.|++++|+||+++++.+
T Consensus 114 ~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g- 192 (352)
T 1iug_A 114 PEDVAKEGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPG- 192 (352)
T ss_dssp TTTSCCSSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSC-
T ss_pred HHHHhccCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccCCCc-
Confidence 9999999999 9999999999876432 21234689999999998776533
Q ss_pred eEEEEEEcChhHHHH---------HHHHH-----HhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHHHhC
Q 019543 162 MAGVLAVKGERLAKE---------LYFLQ-----NAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~---------l~~~~-----~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~L~~ 223 (339)
.|++++++ ++.+. ++... .......+....+.+...++ .++...++..++++++.+.|++
T Consensus 193 -~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 270 (352)
T 1iug_A 193 -LGFVALSP-RALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEE 270 (352)
T ss_dssp -EEEEEECH-HHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred -eeEEEECH-HHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36777765 44443 22111 11223344433322222222 2456677778888999999987
Q ss_pred CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHH
Q 019543 224 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEV 303 (339)
Q Consensus 224 ~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~ 303 (339)
+ +++. ..|. ..+.+++|.+.+.....++.+.|...|+.++.|. .+
T Consensus 271 ~-g~~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~------~~------------ 315 (352)
T 1iug_A 271 G-GLRP-VPKR---------------FSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQ------GP------------ 315 (352)
T ss_dssp T-TCEE-SCSS---------------BCTTCEEEECCTTCCHHHHHHHHHTTTEECEECC------GG------------
T ss_pred C-CCcc-cccc---------------cCCeEEEEEcCCCCCHHHHHHHHHHCCEEEEeCC------Cc------------
Confidence 6 5542 2120 1356888887532234567777777788877553 11
Q ss_pred HHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 304 RQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 304 ~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..++.+|||++...+++.++.+.++|+
T Consensus 316 -----~~~~~iRi~~~~~~~~~~i~~~~~~l~ 342 (352)
T 1iug_A 316 -----LKGKVFRLSLMGAYDRYEALGVAGMFR 342 (352)
T ss_dssp -----GTTTEEEECCCSSCCHHHHHHHHHHHH
T ss_pred -----cCCCEEEEEccccCCHHHHHHHHHHHH
Confidence 034789999997655555555555544
No 82
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.81 E-value=3.6e-18 Score=164.12 Aligned_cols=240 Identities=13% Similarity=0.015 Sum_probs=158.2
Q ss_pred CchHHHHHHHHHhHhC-------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 54 NPTRDALESLLAKLDK-------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g-------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
.+...++++.++++++ .+++++++||++|+.+++ .+++|||+|+++++.|.+....+.
T Consensus 95 ~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 174 (427)
T 3dyd_A 95 SIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPE 174 (427)
T ss_dssp TTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGG
T ss_pred CCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccc
Confidence 3457899999999987 457888999999998644 578999999999999987654433
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cC---c-ccCCC---
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SR---P-LELGA--- 144 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~---~-~~~~~--- 144 (339)
++|+++|++||+++|+|++|+.... +. . ...+.
T Consensus 175 ~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~ 254 (427)
T 3dyd_A 175 KSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVP 254 (427)
T ss_dssp GTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCC
T ss_pred cCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCc
Confidence 8999999999999999999975332 11 1 11222
Q ss_pred eEEEeccccccccCCCceEEEEEEcC------hhHHHHHHHHHHhcCCCCChHHHHHHHhchh-----hHHHHHHHHHHH
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKG------ERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDN 213 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~------~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~-----~~~~r~~~~~~~ 213 (339)
.++++|+||.++.+|.. .|++++++ +++.+.+...... ....++...+.+...|+ .+..+.++..++
T Consensus 255 vi~~~S~sK~~~~~G~r-iG~~~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~ 332 (427)
T 3dyd_A 255 ILSCGGLAKRWLVPGWR-LGWILIHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSN 332 (427)
T ss_dssp EEEEEESTTTSSCGGGC-CEEEEEECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred EEEEeeccccCCCcCcc-eEEEEecCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 37789999998877654 45666664 2455566554432 23455555444444443 356667777888
Q ss_pred HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-----HHHHHHHccC-CcceeecccCCcccc
Q 019543 214 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVVETT-KYFSITVSFGSVKSL 287 (339)
Q Consensus 214 a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-----~~~~~~~~~L-~~~~i~v~~G~~~s~ 287 (339)
++++.+.|+++|+++. ..|. .+..+++.+... ....++++.| ++.|+.+..|..+.
T Consensus 333 ~~~l~~~L~~~~g~~~-~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~- 394 (427)
T 3dyd_A 333 ADLCYGALAAIPGLRP-VRPS----------------GAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFE- 394 (427)
T ss_dssp HHHHHHHHHHSTTEEE-ECCS----------------BTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGT-
T ss_pred HHHHHHHHhcCCCcee-cCCC----------------eeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccC-
Confidence 8999999998887743 3331 234555555411 2235666666 46788877654211
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE--DVNDLISDLDKALR 335 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e--~~~~li~~l~~al~ 335 (339)
.++.+|||++.. +.++.++.|.++++
T Consensus 395 ----------------------~~~~iRis~~~~~e~i~~~l~~l~~~l~ 422 (427)
T 3dyd_A 395 ----------------------YPNFIRVVITVPEVMMLEACSRIQEFCE 422 (427)
T ss_dssp ----------------------CTTEEEEESCSCHHHHHHHHHHHHHHHH
T ss_pred ----------------------CCCeEEEEECCCHHHHHHHHHHHHHHHH
Confidence 247899999842 22333444444443
No 83
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.81 E-value=1.4e-18 Score=164.65 Aligned_cols=207 Identities=16% Similarity=0.135 Sum_probs=142.9
Q ss_pred chHHHHHHHHHhHh----CC----CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------
Q 019543 55 PTRDALESLLAKLD----KA----DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~----g~----~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
+...+|++.+++++ |. +++++++||++|+..++ .+++|||+|+++++.|++....+.
T Consensus 78 ~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 157 (389)
T 1o4s_A 78 RGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMS 157 (389)
T ss_dssp TCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGG
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCc
Confidence 34677888888876 53 46888888899998644 478999999999998877653322
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C--c-cc----CCC
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R--P-LE----LGA 144 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~--~-~~----~~~ 144 (339)
++|+++|++||+++|+|++|+.+... . . .. .+.
T Consensus 158 ~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~ 237 (389)
T 1o4s_A 158 KNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDR 237 (389)
T ss_dssp GTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTT
T ss_pred cCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCc
Confidence 89999999999999999999865442 1 1 11 357
Q ss_pred eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhC
Q 019543 145 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-MALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 145 Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~-~~~r~~~~~~~a~~l~~~L~~ 223 (339)
|++++|+||+++.+| ...|++++++ ++.+.+...........++...+.+...|+. ++...++..++.+++.+.|++
T Consensus 238 ~i~~~s~sK~~~~~G-~r~G~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~L~~ 315 (389)
T 1o4s_A 238 IVYINGFSKSHSMTG-WRVGYLISSE-KVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKK 315 (389)
T ss_dssp EEEEEESTTTTTCGG-GCCEEEECCH-HHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeechhhcCCcc-cceEEEEeCH-HHHHHHHHHhhhcccCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999997555 4568888864 6888887766555555666655544444433 455566667788888888887
Q ss_pred CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC-cceeecccCC
Q 019543 224 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGS 283 (339)
Q Consensus 224 ~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~-~~~i~v~~G~ 283 (339)
+ +++.+ .| ..+.++++.+. ....++.+.|. ..|+.++.|.
T Consensus 316 ~-g~~~~-~~----------------~~~~~~~~~~~--~~~~~l~~~l~~~~gi~v~~g~ 356 (389)
T 1o4s_A 316 M-GVKFV-EP----------------EGAFYLFFKVR--GDDVKFCERLLEEKKVALVPGS 356 (389)
T ss_dssp T-TCCCC-CC----------------SBSSEEEEECS--SCHHHHHHHHHHHHCEECEEGG
T ss_pred c-CCeee-cC----------------CcceEEEEeCC--CCHHHHHHHHHHHCCEEEeCch
Confidence 6 44321 11 12345666664 23456777775 6788776553
No 84
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.81 E-value=2.7e-18 Score=161.44 Aligned_cols=233 Identities=12% Similarity=0.041 Sum_probs=155.3
Q ss_pred HHHHHHHHHhH----hCC----CeEEEcCcHHHHHHHH-HHhcCC--CCEEEEcCCCccchHHHHH--------------
Q 019543 57 RDALESLLAKL----DKA----DRALCFTSGMAALAAV-THLLGT--GEEIVAGDDLYGGTDRLLS-------------- 111 (339)
Q Consensus 57 ~~~le~~la~~----~g~----~~~l~~~sG~~A~~~i-l~ll~~--GD~Vi~~~~~y~~~~~~~~-------------- 111 (339)
..++++.++++ +|. ++++++++|++|+..+ ..++++ ||+|+++.+.|.+....+.
T Consensus 61 ~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 140 (376)
T 3ezs_A 61 EESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKE 140 (376)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGG
T ss_pred CHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCC
Confidence 34555555554 463 5788888889999854 457899 9999999999887654332
Q ss_pred ------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-c---c---------cC
Q 019543 112 ------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-P---L---------EL 142 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-~---~---------~~ 142 (339)
++|+++|++||+++|+|++|+...... + . ..
T Consensus 141 ~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (376)
T 3ezs_A 141 NDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAF 220 (376)
T ss_dssp GTSCCCCCHHHHHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTC
T ss_pred CCcchhHHhhhccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHcccccccccc
Confidence 788899999999999999997644321 1 1 24
Q ss_pred CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHH
Q 019543 143 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAE 219 (339)
Q Consensus 143 ~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~ 219 (339)
+.++++.|+||++|.+| ...|+++++ +++++.+.......+...++...+.+...++ .++...++..++.+++.+
T Consensus 221 ~~~i~~~s~sK~~g~~G-~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~ 298 (376)
T 3ezs_A 221 KNVLVIHSLSKRSSAPG-LRSGFIAGD-SRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARK 298 (376)
T ss_dssp TTEEEEEESTTTTTCGG-GCCEEEEEC-HHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEecchhccCCcc-ceeEEEeeC-HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 56799999999997555 445777775 4788888776655566677766555444443 355566667777788888
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCc-ceeecccCCcccceeccccccCCC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHAS 298 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~-~~i~v~~G~~~s~~~~p~~~~h~~ 298 (339)
.|+ ++. .| +.+.++++.+. ...++.+.|.. .|+.++.|..+.. .
T Consensus 299 ~l~---~~~---~~----------------~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~~~~---~------- 343 (376)
T 3ezs_A 299 IFK---NTL---IY----------------PYSFYVYLPVQ---NGENFAKTLYQNEGIITLPALYLGR---N------- 343 (376)
T ss_dssp HST---TCC---CC----------------SBSSEEEEECS---CHHHHHHHHHHHHCCBCEEGGGGCS---T-------
T ss_pred Hhc---CCC---CC----------------CcceEEEEECC---CHHHHHHHHHHhCCEEEeCcHHhCC---C-------
Confidence 776 221 22 14567788776 23566776755 7888876653221 0
Q ss_pred CCHHHHHhCCCCCCeEEEEecc--CCHHHHHHHHHHHHh
Q 019543 299 IPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 335 (339)
Q Consensus 299 ~~~~~~~~~g~~~~~lRisvg~--e~~~~li~~l~~al~ 335 (339)
+..++.+|||++. ++.+..++.|.++++
T Consensus 344 ---------~~~~~~iRis~~~~~~~i~~~l~~l~~~l~ 373 (376)
T 3ezs_A 344 ---------RIGADYVRLALVYDTPLLEKPLEIIETYRE 373 (376)
T ss_dssp ---------TTTTTEEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred ---------CCCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 0145789999975 223344455555554
No 85
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.81 E-value=1.9e-18 Score=163.24 Aligned_cols=239 Identities=12% Similarity=0.070 Sum_probs=159.8
Q ss_pred HHHHHHHHHhH----hC----CC-eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 57 RDALESLLAKL----DK----AD-RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 57 ~~~le~~la~~----~g----~~-~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
..+|++.++++ +| .+ +++++++|++|+.+++ .+++|||+|+++++.|++....++
T Consensus 69 ~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~ 148 (386)
T 1u08_A 69 VQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPH 148 (386)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTT
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCccc
Confidence 56677777776 35 34 7888888899998654 478999999999998887654332
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cC---cc-----cCCCe
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SR---PL-----ELGAD 145 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~---~~-----~~~~D 145 (339)
++|+++|++||+++|+|++|+...+ +. ++ ..+.|
T Consensus 149 ~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (386)
T 1u08_A 149 FRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERA 228 (386)
T ss_dssp CCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTE
T ss_pred CcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcE
Confidence 8899999999999999999976432 11 11 13579
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh----HHHHHHHHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l~~~L 221 (339)
++++|+||+++.+| ...|+++++ +++++.++......+...++...+.+...|+. ++...++..++.+++.+.|
T Consensus 229 i~~~s~sK~~~~~G-~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 306 (386)
T 1u08_A 229 VAVSSFGKTYHMTG-WKVGYCVAP-APISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNAL 306 (386)
T ss_dssp EEEEEHHHHTTCGG-GCCEEEECC-HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHT
T ss_pred EEEecchhhcCCcc-cceEEEEcC-HHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998655 345788876 47888887766544555565544444434432 4455666778888899999
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccCC-cceeecccCCcccceeccccccCCC
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHAS 298 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~~h~~ 298 (339)
+++ ++. +..| ..+.++++.+.+. ....++.+.|. ..|+.++.|..+.. .+
T Consensus 307 ~~~-g~~-~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~--~~------- 359 (386)
T 1u08_A 307 NES-RLE-ILPC----------------EGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCA--DP------- 359 (386)
T ss_dssp TSS-SCE-ECCC----------------CBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCS--SC-------
T ss_pred HHC-CCe-ecCC----------------CceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCC--CC-------
Confidence 876 443 2112 1245788877542 23456776664 56888776543210 00
Q ss_pred CCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 299 IPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 299 ~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..++.+|||++. +++.++.+.++|++
T Consensus 360 ----------~~~~~iRis~~~--~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 360 ----------FPHKLIRLCFAK--KESTLLAAAERLRQ 385 (386)
T ss_dssp ----------CCSCEEEEECCS--CHHHHHHHHHHHTT
T ss_pred ----------CCCCEEEEEEcC--CHHHHHHHHHHHhh
Confidence 134789999985 45656677776654
No 86
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.81 E-value=1.8e-18 Score=163.71 Aligned_cols=240 Identities=15% Similarity=0.112 Sum_probs=158.7
Q ss_pred HHHHHHHHHhHh--------CCCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 57 RDALESLLAKLD--------KADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~--------g~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
..++++.+++++ ..+++++++||++|+.+++ .+++|||+|+++.+.|.+....+.
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~ 149 (391)
T 3h14_A 70 LPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENR 149 (391)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred hHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccC
Confidence 456677777665 2357889999999998644 588999999999998877654332
Q ss_pred ----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cccC-CCeEEEeccc
Q 019543 112 ----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PLEL-GADIVMHSAT 152 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~~~-~~Di~~~S~s 152 (339)
++|+++|++||+++|+|++|+...... .... ..+++++|+|
T Consensus 150 ~~~d~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~s 229 (391)
T 3h14_A 150 LQPVPADFAGLDLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFS 229 (391)
T ss_dssp TSCCHHHHTTSCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESS
T ss_pred CCCCHHHHHhcCCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEech
Confidence 889999999999999999997543321 1122 3469999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHh---chhhHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR---GVKTMALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~---~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
|.++.+| ...|++++++ ++.+.+......++...++...+.+.. ..+.+..+.++..++.+++.+.|++++.+.
T Consensus 230 K~~g~~G-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~- 306 (391)
T 3h14_A 230 KYFSMTG-WRVGWMVVPE-DQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGFTR- 306 (391)
T ss_dssp STTCCTT-SCCEEEECCG-GGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCC-
T ss_pred hccCCcc-ceeEEEEeCH-HHHHHHHHHHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCCc-
Confidence 9997655 4567887765 688888877766666667665444433 334456667777888888999888764321
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCCc-ceeecccCCcccceeccccccCCCCCHHHHHhC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQAR 307 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~~-~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~ 307 (339)
+..| ..+.++++.+.. .....++++.|.. .|+.++.|..+.. +
T Consensus 307 ~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~---------------- 351 (391)
T 3h14_A 307 IAPP----------------DGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDP---E---------------- 351 (391)
T ss_dssp BCCC----------------CBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCT---T----------------
T ss_pred ccCC----------------CeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCC---C----------------
Confidence 1111 123456666643 2234567777544 5888876653211 0
Q ss_pred CCCCCeEEEEeccC--CHHHHHHHHHHHHh
Q 019543 308 GLTEDLVRISVGIE--DVNDLISDLDKALR 335 (339)
Q Consensus 308 g~~~~~lRisvg~e--~~~~li~~l~~al~ 335 (339)
..++.+|||++.. +.++.++.|.++++
T Consensus 352 -~~~~~iRis~~~~~~~i~~~l~~l~~~~~ 380 (391)
T 3h14_A 352 -RGAGTLRFSYARATADIEEGLDRLEAFMQ 380 (391)
T ss_dssp -TGGGEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred -CCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1347899999982 22333444444443
No 87
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.81 E-value=2.3e-18 Score=164.27 Aligned_cols=242 Identities=17% Similarity=0.184 Sum_probs=155.8
Q ss_pred hHHHHHHHHHhHhC--------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 56 TRDALESLLAKLDK--------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g--------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
...++++.++++++ .+++++++||++|+.+++ .++++||+|+++++.|++....+.
T Consensus 80 g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 159 (409)
T 2gb3_A 80 GIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEE 159 (409)
T ss_dssp CCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGG
T ss_pred CcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCC
Confidence 45788888888764 257888899999998644 578999999999988865432111
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C--c-cc--CCCeEEE
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R--P-LE--LGADIVM 148 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~--~-~~--~~~Di~~ 148 (339)
++|+++|++||+++|+|++|+.+... . + +. .+.|+++
T Consensus 160 ~~~~~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~ 239 (409)
T 2gb3_A 160 GFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVI 239 (409)
T ss_dssp TSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEE
T ss_pred CCccHHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEE
Confidence 88999999999999999999865431 1 1 21 2569999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHHHhCC
Q 019543 149 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 149 ~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
+|+||+++.+| ...|+++++++++.+.++....... ..++...+.+...|+ .++...++..++.+++.+.|+++
T Consensus 240 ~s~sK~~g~~G-~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 317 (409)
T 2gb3_A 240 DSVSKKFSACG-ARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH 317 (409)
T ss_dssp EESTTTTTCGG-GCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecchhccCCcc-ceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999997655 4568888876467788877665544 566665544444442 24555666777888888888876
Q ss_pred CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcc------eeecccCCcccceeccccccCCC
Q 019543 225 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF------SITVSFGSVKSLISMPCFMSHAS 298 (339)
Q Consensus 225 ~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~------~i~v~~G~~~s~~~~p~~~~h~~ 298 (339)
++..+..| ..+.++++.+.+ ....++.+.|... |+.++.|..+.. .+
T Consensus 318 -g~~~~~~~----------------~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~--~~------- 370 (409)
T 2gb3_A 318 -GLKRFTKP----------------SGAFYITAELPV-EDAEEFARWMLTDFNMDGETTMVAPLRGFYL--TP------- 370 (409)
T ss_dssp -TCCCBCCC----------------SBSSEEEEECSS-SCHHHHHHHHHHSCCBTTEEEECEEGGGGCS--ST-------
T ss_pred -CceeeeCC----------------CeeEEEEEEeCC-CCHHHHHHHHHhccccccCcEEEeCchHhCC--CC-------
Confidence 44321111 123455556642 1245666666543 888775542210 00
Q ss_pred CCHHHHHhCCCCCCeEEEEecc--CCHHHHHHHHHHHHh
Q 019543 299 IPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 335 (339)
Q Consensus 299 ~~~~~~~~~g~~~~~lRisvg~--e~~~~li~~l~~al~ 335 (339)
+..++.+|||++. ++.+..++.|.++++
T Consensus 371 ---------~~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 400 (409)
T 2gb3_A 371 ---------GLGKKEIRIACVLEKDLLSRAIDVLMEGLK 400 (409)
T ss_dssp ---------TTTSSEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred ---------CCCCCEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 1135789999993 122333444444443
No 88
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.81 E-value=3.7e-18 Score=163.82 Aligned_cols=245 Identities=15% Similarity=0.159 Sum_probs=154.8
Q ss_pred CchHHHHHHHHHhHhCCC-----------eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchH--------------
Q 019543 54 NPTRDALESLLAKLDKAD-----------RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTD-------------- 107 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~-----------~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~-------------- 107 (339)
.+.++++.+.+++.+|.+ ++++++++++|+..++ .+++|||+|+++++.|.+..
T Consensus 81 ~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 160 (425)
T 2r2n_A 81 PELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVA 160 (425)
T ss_dssp HHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeC
Confidence 355667777777766742 4566666689998644 57899999999999875432
Q ss_pred ------------HHH-------------H------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-c
Q 019543 108 ------------RLL-------------S------------------------RKIAEMAHAHGALLLVDNSIMSPVL-S 137 (339)
Q Consensus 108 ------------~~~-------------~------------------------~~I~~la~~~g~~livD~a~a~g~~-~ 137 (339)
..+ . ++|+++|++||++||+|++|+...+ +
T Consensus 161 ~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g 240 (425)
T 2r2n_A 161 SDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240 (425)
T ss_dssp EETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS
T ss_pred cCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCC
Confidence 111 1 6999999999999999999974322 1
Q ss_pred C---c-cc---CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh--------
Q 019543 138 R---P-LE---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-------- 202 (339)
Q Consensus 138 ~---~-~~---~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~-------- 202 (339)
. . .. .+.+++++|+||+++ +| ...|++++++ ++++.+.......+...++...+++...|+.
T Consensus 241 ~~~~~~~~~~~~~~~i~~~s~SK~~~-~G-lRiG~~~~~~-~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~ 317 (425)
T 2r2n_A 241 FRVPTFLSMDVDGRVIRADSFSKIIS-SG-LRIGFLTGPK-PLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMA 317 (425)
T ss_dssp SCCCCTGGGCTTSCEEEEEESTTTTC-ST-TCCEEEEEEH-HHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccccCCCCCEEEEccchhhcc-Cc-cceEEEecCH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHHH
Confidence 1 1 11 234699999999997 55 4567887775 6888887776655566677665554444443
Q ss_pred -HHHHHHHHHHHHHHHHHHHhC-CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHH-HHccCCcceeec
Q 019543 203 -MALRVEKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKH-VVETTKYFSITV 279 (339)
Q Consensus 203 -~~~r~~~~~~~a~~l~~~L~~-~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~-~~~~L~~~~i~v 279 (339)
+....++..++.+++.+.|++ .+++..+..|. .|..+++.+.+.....+ +.+.|...|+.+
T Consensus 318 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~l~~~gv~v 381 (425)
T 2r2n_A 318 HVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA----------------AGMFLWIKVKGINDVKELIEEKAVKMGVLM 381 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCS----------------BSSEEEEEETTCSCCHHHHHTHHHHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCC----------------ceEEEEEEeCCCCCHHHHHHHHHHHCCcEE
Confidence 333445566777888888876 46553333331 35677887753212233 456666778888
Q ss_pred ccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccC---CHHHHHHHHHHHHh
Q 019543 280 SFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE---DVNDLISDLDKALR 335 (339)
Q Consensus 280 ~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e---~~~~li~~l~~al~ 335 (339)
+.|..+.. +. +...+.+|||++.. +.++.++.|.++++
T Consensus 382 ~pg~~f~~---~~---------------~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 422 (425)
T 2r2n_A 382 LPGNAFYV---DS---------------SAPSPYLRASFSSASPEQMDVAFQVLAQLIK 422 (425)
T ss_dssp EEGGGGSS---ST---------------TSCCCEEEEECSSCCHHHHHHHHHHHHHHHH
T ss_pred echhhhcC---CC---------------CCCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 76653221 00 01247899999742 23444555555544
No 89
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.81 E-value=1e-18 Score=165.93 Aligned_cols=242 Identities=14% Similarity=0.153 Sum_probs=159.9
Q ss_pred chHHHHHHHHHhHhCC--CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------------------
Q 019543 55 PTRDALESLLAKLDKA--DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~--~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------------------- 111 (339)
+...+|++.+++++|. ++++++++|++|+.+++ .++++||+|+++.+.|++....+.
T Consensus 74 ~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~ 153 (397)
T 2zyj_A 74 EGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEGPDLDA 153 (397)
T ss_dssp TCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHH
T ss_pred CCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCCCCCHHH
Confidence 3578999999999985 35677777788998544 578999999999998876543322
Q ss_pred --------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCc----ccCC------CeEEE
Q 019543 112 --------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRP----LELG------ADIVM 148 (339)
Q Consensus 112 --------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~----~~~~------~Di~~ 148 (339)
++|+++|++||+++|+|++|+.+.. +.. ..++ ..+++
T Consensus 154 l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~ 233 (397)
T 2zyj_A 154 LEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYL 233 (397)
T ss_dssp HHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEE
T ss_pred HHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEE
Confidence 5899999999999999999986543 111 1222 23899
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh-----hHHHHHHHHHHHHHHHHHHHhC
Q 019543 149 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 149 ~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~-----~~~~r~~~~~~~a~~l~~~L~~ 223 (339)
+|+||+++ +| ...|+++++ +++.+.++.....+....++...+.+...|+ .+....++..++.+++.+.|++
T Consensus 234 ~s~sK~~~-~G-~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 310 (397)
T 2zyj_A 234 GSFSKVLS-PG-LRVAFAVAH-PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDR 310 (397)
T ss_dssp EESTTTTC-GG-GCCEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccccccc-cc-ceeEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 44 456788876 4788877765544333346655544444343 2445566667788888888876
Q ss_pred -CC-CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCH
Q 019543 224 -HP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 301 (339)
Q Consensus 224 -~~-~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~ 301 (339)
.| ++.. ..| +.+.++++.+.+.....++.+.|...|+.++.|..+.. .
T Consensus 311 ~~~~g~~~-~~~----------------~~g~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~--~----------- 360 (397)
T 2zyj_A 311 EVPKEVRY-TRP----------------KGGMFVWMELPKGLSAEGLFRRALEENVAFVPGGPFFA--N----------- 360 (397)
T ss_dssp HSCTTSEE-CCC----------------SBSSEEEEECSTTCCHHHHHHHHHHTTEEEEESGGGCT--T-----------
T ss_pred HCCCCeEE-ccC----------------CccEEEEEEcCCCCCHHHHHHHHHHCCCEEechHHhcC--C-----------
Confidence 45 4532 222 13567788875322345677777666888776543210 0
Q ss_pred HHHHhCCCCCCeEEEEeccC---CHHHHHHHHHHHHh
Q 019543 302 EVRQARGLTEDLVRISVGIE---DVNDLISDLDKALR 335 (339)
Q Consensus 302 ~~~~~~g~~~~~lRisvg~e---~~~~li~~l~~al~ 335 (339)
+..++.+|||++.. +.++.++.|.++++
T Consensus 361 ------~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 391 (397)
T 2zyj_A 361 ------GGGENTLRLSYATLDREGIAEGVRRLGRALK 391 (397)
T ss_dssp ------SCCTTEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred ------CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 01347899999975 33444555555554
No 90
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.81 E-value=2.2e-18 Score=163.09 Aligned_cols=234 Identities=14% Similarity=0.135 Sum_probs=150.5
Q ss_pred HHHHHHHHHhHh----C----CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 57 RDALESLLAKLD----K----ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~----g----~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
..+|++.+++++ | .++++++++|++|+.+++ .+++|||+|+++++.|.+....++
T Consensus 70 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 149 (385)
T 1b5p_A 70 IPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEG 149 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGT
T ss_pred CHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccC
Confidence 456666666655 4 246788888899998654 578999999999999876654332
Q ss_pred -------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc----CcccC--CCeEEE
Q 019543 112 -------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS----RPLEL--GADIVM 148 (339)
Q Consensus 112 -------------------------------------~~I~~la~~~g~~livD~a~a~g~~~----~~~~~--~~Di~~ 148 (339)
++|+++|++||++||+|++|+...+. ..... +.++++
T Consensus 150 ~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~ 229 (385)
T 1b5p_A 150 FVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV 229 (385)
T ss_dssp TCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEE
T ss_pred CCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEE
Confidence 88999999999999999999865431 11122 457999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh-------hHHHHHHHHHHHHHHHHHHH
Q 019543 149 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-------TMALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 149 ~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~-------~~~~r~~~~~~~a~~l~~~L 221 (339)
+||||.++.+| ...|+++++ +++.+.++..+.......+.....++...|+ .++...++..++.+++.+.|
T Consensus 230 ~s~SK~~~~~G-~RiG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 307 (385)
T 1b5p_A 230 NGAAKAFAMTG-WRIGYACGP-KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGL 307 (385)
T ss_dssp EESTTTTTCGG-GCCEEEECC-HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EechhhcCCcc-cceEEEEeC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998766 446788776 4687888776554444556554444333332 24445566667778888888
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCCcceeecccCCcccceeccccccCCCCC
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIP 300 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~ 300 (339)
+++ +++. ..| ..+..+++.+.. .....++.+.|...|+.++.|..+.
T Consensus 308 ~~~-g~~~-~~~----------------~~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~-------------- 355 (385)
T 1b5p_A 308 TAL-GLKA-VRP----------------SGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFA-------------- 355 (385)
T ss_dssp HHH-TCCB-CCC----------------SBTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGT--------------
T ss_pred HHC-CCee-cCC----------------CeeEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccC--------------
Confidence 765 4431 111 022345555531 1134567777767788877664321
Q ss_pred HHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 301 VEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 301 ~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.++.+|||++ .+ ++.++...+.|+
T Consensus 356 ---------~~~~iRis~~-~~-~~~i~~~l~~l~ 379 (385)
T 1b5p_A 356 ---------AFGHVRLSYA-TS-EENLRKALERFA 379 (385)
T ss_dssp ---------CTTEEEEECC-SC-HHHHHHHHHHGG
T ss_pred ---------CCCeEEEEec-CC-HHHHHHHHHHHH
Confidence 1367999999 33 333444444443
No 91
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.81 E-value=4.4e-18 Score=161.41 Aligned_cols=239 Identities=13% Similarity=0.141 Sum_probs=157.6
Q ss_pred HHHHHHHHHhHh----C----CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 57 RDALESLLAKLD----K----ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~----g----~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
..++++.+++++ | .++++++++|++|+.+++ .+++|||+|+++.+.|++....+.
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g 147 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDG 147 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETT
T ss_pred cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCC
Confidence 667777777763 5 356888888899998654 578999999999998876543221
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cC---cc-c-----C
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SR---PL-E-----L 142 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~---~~-~-----~ 142 (339)
++|+++|++||+++|+|++|+.... +. .+ . .
T Consensus 148 ~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 227 (399)
T 1c7n_A 148 YYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLA 227 (399)
T ss_dssp EEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHH
T ss_pred CEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCcccc
Confidence 8899999999999999999976432 11 11 1 2
Q ss_pred CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCC-CCChHHHHHHHhchh----hHHHHHHHHHHHHHHH
Q 019543 143 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS-GLAPFDCWICLRGVK----TMALRVEKQQDNAQKI 217 (339)
Q Consensus 143 ~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~-~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l 217 (339)
+.++++.|+||+++.+| ...|+++++++++.+.++.....++. ..++...+.+...++ .++...++..++.+++
T Consensus 228 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 306 (399)
T 1c7n_A 228 DKTITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIV 306 (399)
T ss_dssp TTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeChhhccccc-hheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 34689999999998655 44678888765688888776655543 456655544443332 3455566677888889
Q ss_pred HHHHhC-CCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCCH-HHHHHHHccCC-cceeecccCCcccceecccc
Q 019543 218 AEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSL-ALSKHVVETTK-YFSITVSFGSVKSLISMPCF 293 (339)
Q Consensus 218 ~~~L~~-~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~-~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~ 293 (339)
.+.|++ +|++..+ + +.++ ++++.+.+. ....++.+.|. ..|+.++.|..+. +
T Consensus 307 ~~~L~~~~~~~~~~--~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~-- 362 (399)
T 1c7n_A 307 KDFFEVNHPEIKAP--L----------------IEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFG----D-- 362 (399)
T ss_dssp HHHHHHHCTTSBCC--C----------------CSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGC----G--
T ss_pred HHHHHhhCCCCeEe--c----------------CCceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccC----C--
Confidence 999987 6765421 1 1234 446776421 13456777775 6788877654321 1
Q ss_pred ccCCCCCHHHHHhCCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Q 019543 294 MSHASIPVEVRQARGLTEDLVRISVGIE--DVNDLISDLDKALR 335 (339)
Q Consensus 294 ~~h~~~~~~~~~~~g~~~~~lRisvg~e--~~~~li~~l~~al~ 335 (339)
..++.+|||++.. +.++.++.|.++++
T Consensus 363 ---------------~~~~~iRis~~~~~~~l~~~l~~l~~~l~ 391 (399)
T 1c7n_A 363 ---------------GGIGFERINLAAPSSVIQESLERLNKALK 391 (399)
T ss_dssp ---------------GGTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred ---------------CCCCeEEEEeccCHHHHHHHHHHHHHHHH
Confidence 0347899999975 22333445555544
No 92
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.81 E-value=2.7e-18 Score=163.55 Aligned_cols=240 Identities=14% Similarity=0.092 Sum_probs=154.1
Q ss_pred hHHHHHHHHHhHhC--------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 56 TRDALESLLAKLDK--------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g--------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
...++++.++++++ .+++++++||++|+.+++ .+++|||+|+++++.|++....+.
T Consensus 79 g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 158 (406)
T 1xi9_A 79 GLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEE 158 (406)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGG
T ss_pred CcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCc
Confidence 35677777777762 257888888899998654 478999999999998876543322
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-c--c-c--CCC-eE
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-P--L-E--LGA-DI 146 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-~--~-~--~~~-Di 146 (339)
++|+++|++||+++|+|++|+.+.... . + . .+. |+
T Consensus 159 ~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i 238 (406)
T 1xi9_A 159 DWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVI 238 (406)
T ss_dssp TSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEE
T ss_pred CCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEE
Confidence 899999999999999999998654321 1 1 1 245 89
Q ss_pred EEeccccccccCCCceEEEEE--EcCh---hHHHHHHHHHHhcCCCCChHHHHHHHhch----hhHHHHHHHHHHHHHHH
Q 019543 147 VMHSATKFIAGHSDVMAGVLA--VKGE---RLAKELYFLQNAEGSGLAPFDCWICLRGV----KTMALRVEKQQDNAQKI 217 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~--~~~~---~l~~~l~~~~~~~~~~~~~~~a~~~~~~l----~~~~~r~~~~~~~a~~l 217 (339)
+++|+||+++.+|. ..|+++ +++. ++++.++...... ...++...+.+...| +.++...++..++.+++
T Consensus 239 ~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 316 (406)
T 1xi9_A 239 VMNGLSKVYFATGW-RLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYI 316 (406)
T ss_dssp EEEESTTTTCCGGG-CCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHH
T ss_pred EEeccccccCCCcc-EEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 99999999986553 346666 5431 6778777665543 455555444433333 23455566677888889
Q ss_pred HHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCC--HHHHHHHHccCC-cceeecccCCcccceecccc
Q 019543 218 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGS--LALSKHVVETTK-YFSITVSFGSVKSLISMPCF 293 (339)
Q Consensus 218 ~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~--~~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~ 293 (339)
.+.|+++|++..+ .| .++ ++++.+.. .....++.+.|. ..|+.++.|..+..
T Consensus 317 ~~~L~~~~~~~~~-~~-----------------~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~------ 372 (406)
T 1xi9_A 317 YKRLNEIPGISTT-KP-----------------QGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGE------ 372 (406)
T ss_dssp HHHHHTSTTEECC-CC-----------------CBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCG------
T ss_pred HHHHHhCCCCeee-cC-----------------CeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCC------
Confidence 9999888765421 11 233 33445542 123456777774 77888776543210
Q ss_pred ccCCCCCHHHHHhCCCCCCeEEEEecc--CCHHHHHHHHHHHHhc
Q 019543 294 MSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 336 (339)
Q Consensus 294 ~~h~~~~~~~~~~~g~~~~~lRisvg~--e~~~~li~~l~~al~~ 336 (339)
..++.+|||++. ++.++.++.|.+++++
T Consensus 373 ---------------~~~~~lRis~~~~~~~i~~~~~~l~~~l~~ 402 (406)
T 1xi9_A 373 ---------------YGAGHFRAVFLPPIEILEEAMDRFEKFMKE 402 (406)
T ss_dssp ---------------GGTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred ---------------CCCCEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 024679999982 1123334445555443
No 93
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.81 E-value=1.4e-18 Score=167.20 Aligned_cols=238 Identities=13% Similarity=0.110 Sum_probs=153.0
Q ss_pred hHHHHHHHHHhHhC----------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHH--------------
Q 019543 56 TRDALESLLAKLDK----------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLL-------------- 110 (339)
Q Consensus 56 ~~~~le~~la~~~g----------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~-------------- 110 (339)
...+|+++++++++ .+++++++||++|+.+++ .++++||+|+++.+.|.+....+
T Consensus 87 g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~ 166 (435)
T 3piu_A 87 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCT 166 (435)
T ss_dssp CCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECC
T ss_pred CcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCC
Confidence 35789999999887 567889999999998654 58899999999988776543111
Q ss_pred ------------------------H----------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-c----
Q 019543 111 ------------------------S----------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-P---- 139 (339)
Q Consensus 111 ------------------------~----------------------~~I~~la~~~g~~livD~a~a~g~~~~-~---- 139 (339)
+ ++|+++|++||++||+|++|+.+.+.. .
T Consensus 167 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~ 246 (435)
T 3piu_A 167 SSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISV 246 (435)
T ss_dssp GGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCH
T ss_pred CccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCH
Confidence 0 889999999999999999997643321 1
Q ss_pred c----c---------CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHH---Hhchh--
Q 019543 140 L----E---------LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC---LRGVK-- 201 (339)
Q Consensus 140 ~----~---------~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~---~~~l~-- 201 (339)
. . ....++++|+||.+|.+| ...|+++++++.+.+.++.....+ ..++...+.+ +...+
T Consensus 247 ~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~ 323 (435)
T 3piu_A 247 MEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATKMSSFG--LVSSQTQHLLSAMLSDKKLT 323 (435)
T ss_dssp HHHHHC-------CGGGGEEEEEESSSSSCCGG-GCEEEEEESCHHHHHHHHHHGGGS--CCCHHHHHHHHHHHHCHHHH
T ss_pred HHhccccccccccCCCCCEEEEEeeecccCCCc-eeEEEEEeCCHHHHHHHHHHhhcC--CCCHHHHHHHHHHhcChHHH
Confidence 0 1 112388999999997555 456788886666766666544322 2334333222 22222
Q ss_pred --hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH------HHHHHHHccCC
Q 019543 202 --TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL------ALSKHVVETTK 273 (339)
Q Consensus 202 --~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~------~~~~~~~~~L~ 273 (339)
.+..+.++..++.+++.+.|+++ ++.. .+. ..+.++++.+++. ....++++.|.
T Consensus 324 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~~---------------~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~ 385 (435)
T 3piu_A 324 KNYIAENHKRLKQRQKKLVSGLQKS-GISC--LNG---------------NAGLFCWVDMRHLLRSNTFEAEMELWKKIV 385 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT-TCEE--CCC---------------CSSSEEEEECGGGSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCcc--cCC---------------CeeEEEEEEcccccccCCchhHHHHHHHHH
Confidence 23445566677888888989876 4432 111 1346788877532 13456777664
Q ss_pred -cceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccC---CHHHHHHHHHHHHh
Q 019543 274 -YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE---DVNDLISDLDKALR 335 (339)
Q Consensus 274 -~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e---~~~~li~~l~~al~ 335 (339)
..|+.++.|..+. + ..++.+||+++.. +.++.++.|.++++
T Consensus 386 ~~~gi~v~~g~~~~----~-----------------~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~ 430 (435)
T 3piu_A 386 YEVHLNISPGSSCH----C-----------------TEPGWFRVCFANLPERTLDLAMQRLKAFVG 430 (435)
T ss_dssp HTSCEECEEGGGGT----C-----------------SSTTEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred HHCCEEEeCCcccC----C-----------------CCCCEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 3488877654321 1 1357899999863 33444555555554
No 94
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.80 E-value=3.9e-19 Score=166.19 Aligned_cols=229 Identities=17% Similarity=0.085 Sum_probs=155.2
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH-HHhcCCCCE--EEEcCCCccch-----H-HH--------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAV-THLLGTGEE--IVAGDDLYGGT-----D-RL-------------- 109 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i-l~ll~~GD~--Vi~~~~~y~~~-----~-~~-------------- 109 (339)
.++..++||+++++++|.+..++++||++|+.++ ..++.+||+ |+++++.+... . ..
T Consensus 46 ~~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 125 (359)
T 3pj0_A 46 NGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTANQL 125 (359)
T ss_dssp BSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSCTTSC
T ss_pred CCHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCCcCCC
Confidence 4678999999999999999889999999998754 457788887 55554432110 0 00
Q ss_pred -----HH----------------------------HHHHHHHHHcCCEEEEeCCcCCCCC---c-C--cccCCCeEEEec
Q 019543 110 -----LS----------------------------RKIAEMAHAHGALLLVDNSIMSPVL---S-R--PLELGADIVMHS 150 (339)
Q Consensus 110 -----~~----------------------------~~I~~la~~~g~~livD~a~a~g~~---~-~--~~~~~~Di~~~S 150 (339)
+. ++|+++|++||++||+|++|..+.. + . .+..+.|+++.|
T Consensus 126 ~d~~~l~~~~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s 205 (359)
T 3pj0_A 126 LTIDDIKSLREPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVS 205 (359)
T ss_dssp CCHHHHHTCSSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEE
T ss_pred cCHHHHHhccCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEe
Confidence 00 6679999999999999999864431 1 1 122467999999
Q ss_pred cccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCC--ChHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 151 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 151 ~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~--~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
+||+++++ .||+++.+ +++++.++..+..++..+ ....+..+...++....++++..++++++.+.|+++++++
T Consensus 206 ~sK~~~~~---~gg~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 281 (359)
T 3pj0_A 206 FYKGIGGI---AGAILAGN-DDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSCSGVK 281 (359)
T ss_dssp SSSTTCCS---SCEEEEEC-HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHTSTTEE
T ss_pred ccccCCCc---ceEEEECC-HHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCCce
Confidence 99999875 34777765 578888887665554322 2222333334555555566777888999999999988875
Q ss_pred EEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHh
Q 019543 229 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 306 (339)
Q Consensus 229 ~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~ 306 (339)
....|. .++.+++.+.. ......+.+.|.+.|+.++.|..+. .+
T Consensus 282 ~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~---~~--------------- 327 (359)
T 3pj0_A 282 TVPEVP----------------VSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEK---SA--------------- 327 (359)
T ss_dssp EESSSC----------------SSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEE---ET---------------
T ss_pred eeccCC----------------cceEEEEEecCccchhHHHHHHHHHhcCcEecCCcccc---CC---------------
Confidence 432332 45677777643 2345678888888899888764311 11
Q ss_pred CCCCCCeEEEEeccCC
Q 019543 307 RGLTEDLVRISVGIED 322 (339)
Q Consensus 307 ~g~~~~~lRisvg~e~ 322 (339)
..+.+|++++...
T Consensus 328 ---~~~~~r~~i~~~~ 340 (359)
T 3pj0_A 328 ---DVCAFEVSVGDAF 340 (359)
T ss_dssp ---TEEEEEEECCTTG
T ss_pred ---CceEEEEEecCcc
Confidence 3467999998654
No 95
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.80 E-value=1.4e-18 Score=164.46 Aligned_cols=241 Identities=17% Similarity=0.131 Sum_probs=161.0
Q ss_pred CchHHHHHHHHHhHhCCC---eEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccc--hHHHHH----------------
Q 019543 54 NPTRDALESLLAKLDKAD---RALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGG--TDRLLS---------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~---~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~--~~~~~~---------------- 111 (339)
.+..+++++.+++++|.+ .+++++||++|+.++ ..++++||+|+++++.|.+ ....++
T Consensus 66 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 145 (393)
T 1vjo_A 66 LALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEV 145 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHHHHHHHHHHcCCceEEEecCCCCC
Confidence 367889999999999975 577888889999854 4578999999999999887 443222
Q ss_pred ---------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc-ccCCCeEEEecccccccc
Q 019543 112 ---------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP-LELGADIVMHSATKFIAG 157 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~-~~~~~Di~~~S~sK~l~g 157 (339)
++|.++|++||+++|+|++|+.|..... ...+.|++++|+||++++
T Consensus 146 ~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~ 225 (393)
T 1vjo_A 146 FSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGC 225 (393)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCS
T ss_pred CCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccccC
Confidence 8999999999999999999986643211 234679999999999987
Q ss_pred CCCceEEEEEEcChhHHHHHHHH----HH---------------hcCC-CCChHHHHHHHhchhh-----HHHHHHHHHH
Q 019543 158 HSDVMAGVLAVKGERLAKELYFL----QN---------------AEGS-GLAPFDCWICLRGVKT-----MALRVEKQQD 212 (339)
Q Consensus 158 ~~~~~gG~v~~~~~~l~~~l~~~----~~---------------~~~~-~~~~~~a~~~~~~l~~-----~~~r~~~~~~ 212 (339)
++ ..|++++++ ++.+.++.. .. .+.. ..++...+.+...++. ++...++..+
T Consensus 226 ~~--~~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 302 (393)
T 1vjo_A 226 SP--GASPFTMSS-RAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQK 302 (393)
T ss_dssp CS--SCEEEEECH-HHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CC--ceEEEEECH-HHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 65 247888765 566665321 00 1112 4555544444444443 3456677778
Q ss_pred HHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcc-eeecccCCcccceecc
Q 019543 213 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMP 291 (339)
Q Consensus 213 ~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~-~i~v~~G~~~s~~~~p 291 (339)
+.+++.+.|++. +++. ..| +.+ ..+.+++|.+++.....++.+.|... |+.++.|.. +
T Consensus 303 ~~~~l~~~L~~~-g~~~-~~~-----~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~------~ 361 (393)
T 1vjo_A 303 NVEYLWERLEDI-GLSL-HVE-----KEY--------RLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLG------E 361 (393)
T ss_dssp HHHHHHHHHHHT-TCCB-SSC-----GGG--------BCSSEEEEECCTTCCHHHHHHHHHHHHCEECEECCG------G
T ss_pred HHHHHHHHHHHc-CCcc-cCC-----ccc--------cCCcEEEEEcCCCCCHHHHHHHHHhhCCEEEecCcc------c
Confidence 889999999876 4431 111 000 13467888774323356778888665 888876542 1
Q ss_pred ccccCCCCCHHHHHhCCCCCCeEEEE-eccCCHHHHHHHHHHHHh
Q 019543 292 CFMSHASIPVEVRQARGLTEDLVRIS-VGIEDVNDLISDLDKALR 335 (339)
Q Consensus 292 ~~~~h~~~~~~~~~~~g~~~~~lRis-vg~e~~~~li~~l~~al~ 335 (339)
. .++.+||| ++....++.++.+.++|+
T Consensus 362 ~-----------------~~~~iRis~~~~~~~~~~i~~~~~~l~ 389 (393)
T 1vjo_A 362 L-----------------AGKVWRVGLMGFNSRKESVDQLIPALE 389 (393)
T ss_dssp G-----------------TTTEEEEECCGGGCSHHHHHHHHHHHH
T ss_pred c-----------------CCCEEEEeCCccCChHHHHHHHHHHHH
Confidence 0 24789999 465555555555555554
No 96
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.80 E-value=1.4e-18 Score=165.08 Aligned_cols=241 Identities=12% Similarity=0.115 Sum_probs=156.0
Q ss_pred chHHHHHHHHHhHhCCCe---EEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccc--hHHHHH-----------------
Q 019543 55 PTRDALESLLAKLDKADR---ALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGG--TDRLLS----------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~---~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~--~~~~~~----------------- 111 (339)
+..+++++++++++|.+. +++++||++|+.+ +..+++|||+|+++++.|.+ ....+.
T Consensus 46 ~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 125 (411)
T 3nnk_A 46 HYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVF 125 (411)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecCCCCCC
Confidence 567899999999998753 4556678999985 44588999999999998876 332222
Q ss_pred --------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccccC
Q 019543 112 --------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGH 158 (339)
Q Consensus 112 --------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g~ 158 (339)
++|.++|++||+++|+|++|+.+... +....++|++++|++|+++++
T Consensus 126 d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~ 205 (411)
T 3nnk_A 126 TPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGP 205 (411)
T ss_dssp CHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCC
T ss_pred CHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccCCC
Confidence 89999999999999999999876542 223457899999999997765
Q ss_pred CCceEEEEEEcChhHHHHHHHHH------------------------------------HhcCCCCChHHHHHHHhchhh
Q 019543 159 SDVMAGVLAVKGERLAKELYFLQ------------------------------------NAEGSGLAPFDCWICLRGVKT 202 (339)
Q Consensus 159 ~~~~gG~v~~~~~~l~~~l~~~~------------------------------------~~~~~~~~~~~a~~~~~~l~~ 202 (339)
.+ .|++++++ ++.+.++... .....+.+....+.+...++.
T Consensus 206 ~g--~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 282 (411)
T 3nnk_A 206 SG--TSPITLSA-RMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARL 282 (411)
T ss_dssp SS--EEEEEECH-HHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHH
T ss_pred Cc--eEEEEECH-HHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHH
Confidence 42 57887765 6666665432 001122333332222222322
Q ss_pred -----HHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCc-ce
Q 019543 203 -----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY-FS 276 (339)
Q Consensus 203 -----~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~-~~ 276 (339)
++...++..++++++.+.|++. +++.+ .|. ....+.+++|.+.+.....++.+.|.. .|
T Consensus 283 ~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 347 (411)
T 3nnk_A 283 ILQEGLDYGIARHKLHGDALVKGIQAM-GLETF-GDL-------------KHKMNNVLGVVIPQGINGDQARKLMLEDFG 347 (411)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBC-SCG-------------GGBCSSEEEEECCTTCCHHHHHHHHHHHHS
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeC-CCc-------------ccccccEEEEECCCCCCHHHHHHHHHHhcC
Confidence 4556677778888999999876 43321 110 012457888887533334567777755 48
Q ss_pred eecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe-ccCCHH----HHHHHHHHHHhc
Q 019543 277 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-GIEDVN----DLISDLDKALRT 336 (339)
Q Consensus 277 i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv-g~e~~~----~li~~l~~al~~ 336 (339)
+.++.|. .+ ..++.+|||+ +...++ .+++.|.+++++
T Consensus 348 i~v~~g~------~~-----------------~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 389 (411)
T 3nnk_A 348 IEIGTSF------GP-----------------LHGKVWRIGTMGYNARKDCVMTTLSALEAVLNY 389 (411)
T ss_dssp EEEEECC------GG-----------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred eEEeCcc------CC-----------------CCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHH
Confidence 8877552 11 1346899998 755444 444555555443
No 97
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.80 E-value=2e-18 Score=165.39 Aligned_cols=248 Identities=14% Similarity=0.161 Sum_probs=161.2
Q ss_pred CCcccCCCCchHHHHHHHHHhHhC----CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------
Q 019543 46 PYDYTRSGNPTRDALESLLAKLDK----ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------- 111 (339)
Q Consensus 46 ~~~y~r~~~~~~~~le~~la~~~g----~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------- 111 (339)
.+.|+....+..+++.+.+++.+| .+.+++++||++|+.+++ .++++||+|++..+.|++....+.
T Consensus 91 ~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~ 170 (421)
T 3l8a_A 91 IFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVEN 170 (421)
T ss_dssp CSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEE
T ss_pred CcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEec
Confidence 355665555667777777777776 346778888888998644 578999999999998876553322
Q ss_pred ----------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-c---Ccc-
Q 019543 112 ----------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-S---RPL- 140 (339)
Q Consensus 112 ----------------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~---~~~- 140 (339)
++|+++|++||++||+|++|+.... + .++
T Consensus 171 ~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~ 250 (421)
T 3l8a_A 171 SLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLN 250 (421)
T ss_dssp ECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGG
T ss_pred cccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHH
Confidence 8899999999999999999965322 1 111
Q ss_pred c-----CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCC-CCChHHHHHHHhchh----hHHHHHHHH
Q 019543 141 E-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS-GLAPFDCWICLRGVK----TMALRVEKQ 210 (339)
Q Consensus 141 ~-----~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~-~~~~~~a~~~~~~l~----~~~~r~~~~ 210 (339)
. .+.++++.|+||+++.+| ...|+++++++++.+.+.......+. ..++...+.+...++ .++.+.++.
T Consensus 251 ~~~~~~~~~~i~~~s~sK~~g~~G-~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~ 329 (421)
T 3l8a_A 251 TLDASYKDFTIILSSATKTFNIAG-TKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVI 329 (421)
T ss_dssp GSCTTGGGTEEEEECSHHHHTCGG-GCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HcCchhcCcEEEEEeChhhccCch-hheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 1 234599999999998555 45678887756788877766543433 566665444443333 245666777
Q ss_pred HHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCC-cceeecccCCcccce
Q 019543 211 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTK-YFSITVSFGSVKSLI 288 (339)
Q Consensus 211 ~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~-~~~i~v~~G~~~s~~ 288 (339)
.++.+++.+.|+++|++..+. |. .+.++++.+... ....++.+.|. ..|+.++.|..+.
T Consensus 330 ~~~~~~l~~~L~~~~~i~~~~-~~----------------~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~-- 390 (421)
T 3l8a_A 330 EGNIKLVIKELEAKTKIKVME-PE----------------GTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFG-- 390 (421)
T ss_dssp HHHHHHHHHHHHHHCSCEEEC-CS----------------BSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGC--
T ss_pred HHHHHHHHHHHHhCCCceEeC-CC----------------eeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhC--
Confidence 788888999998777765432 20 223445666421 12345666663 5688887664321
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
+ ..++.+||+++. +++.++.+.+.|
T Consensus 391 --~-----------------~~~~~iRi~~~~--~~~~i~~~l~~l 415 (421)
T 3l8a_A 391 --K-----------------EGKYFARLNVAT--PKNTVQEALSRI 415 (421)
T ss_dssp --G-----------------GGTTEEEEECCS--CHHHHHHHHHHH
T ss_pred --C-----------------CCCCEEEEEecC--CHHHHHHHHHHH
Confidence 0 135789999994 334344444443
No 98
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.80 E-value=2.6e-18 Score=160.16 Aligned_cols=239 Identities=13% Similarity=0.095 Sum_probs=163.3
Q ss_pred chHHHHHHHHHhHhCC---CeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccch-HHHHH------------------
Q 019543 55 PTRDALESLLAKLDKA---DRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGT-DRLLS------------------ 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~---~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~-~~~~~------------------ 111 (339)
+..+++++++++++|. +.+++++||++|+.++ .++++| +.|++..+.|... .....
T Consensus 43 ~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 121 (362)
T 3ffr_A 43 EVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFY 121 (362)
T ss_dssp HHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCC
Confidence 5678999999999986 3477888889999864 457777 5565555544411 11111
Q ss_pred ----------------------------HHHHHHHHHc-CCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCce
Q 019543 112 ----------------------------RKIAEMAHAH-GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 162 (339)
Q Consensus 112 ----------------------------~~I~~la~~~-g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~ 162 (339)
++|.++|++| |+++|+|++|+.+........ +|++++|+||+++++.+
T Consensus 122 ~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~-~d~~~~s~~K~~~~~~G-- 198 (362)
T 3ffr_A 122 PADITVPADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTK-IDSVFFSVQKCFGLPAG-- 198 (362)
T ss_dssp GGGCCCCTTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTS-CSEEEEETTSTTCCCSC--
T ss_pred HHHHhccCCccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChhH-CcEEEEecccccCCCCc--
Confidence 9999999999 999999999987754322222 79999999999995543
Q ss_pred EEEEEEcChhHHHHHHHHHH--------------------hc-CCCCChHHHHHHHhchh---h--HHHHHHHHHHHHHH
Q 019543 163 AGVLAVKGERLAKELYFLQN--------------------AE-GSGLAPFDCWICLRGVK---T--MALRVEKQQDNAQK 216 (339)
Q Consensus 163 gG~v~~~~~~l~~~l~~~~~--------------------~~-~~~~~~~~a~~~~~~l~---~--~~~r~~~~~~~a~~ 216 (339)
+|+++.++ ++.++++.... .. ....+....+.+...++ . ++.+.++..+++++
T Consensus 199 ~g~~~~~~-~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 277 (362)
T 3ffr_A 199 LGVWILND-RVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAAL 277 (362)
T ss_dssp CEEEEEEH-HHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred eEEEEECH-HHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 36777764 67777765442 00 22333333222222332 1 46677888899999
Q ss_pred HHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccC
Q 019543 217 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH 296 (339)
Q Consensus 217 l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h 296 (339)
+.+.|+++|+++.+. |. +. ...+.+++|.+.+ ...+|.+.|...|+.++.|. .+
T Consensus 278 l~~~L~~~~g~~~~~-~~----~~--------~~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~g~------~~----- 331 (362)
T 3ffr_A 278 INTYIESSKVFSFGV-ED----AK--------LRSMTTIVANTTM--LPGEINKILEPFDMAVGAGY------GS----- 331 (362)
T ss_dssp HHHHHHHCSSEEESS-SC----GG--------GBCSSEEEEEESS--CHHHHHHHHGGGTEEEEECS------GG-----
T ss_pred HHHHHHHccCceecc-CC----hh--------hcCCceEEEecCC--CHHHHHHHHHHCCeEEecCc------cc-----
Confidence 999999988865321 11 00 1135788888865 56678888887788887552 11
Q ss_pred CCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 297 ASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 297 ~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..++.||||++..++++.++++.++|++
T Consensus 332 ------------~~~~~iRis~~~~~~~e~i~~l~~~l~~ 359 (362)
T 3ffr_A 332 ------------KKETQIRIANFPAHSLEQVHKLVQTLKE 359 (362)
T ss_dssp ------------GTTTEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ------------cCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 1347899999998888889999998875
No 99
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.80 E-value=1.3e-18 Score=165.23 Aligned_cols=246 Identities=23% Similarity=0.186 Sum_probs=161.1
Q ss_pred CCchHHHHHH----HHHhHhCCCeE-EEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchH-------------------
Q 019543 53 GNPTRDALES----LLAKLDKADRA-LCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTD------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~----~la~~~g~~~~-l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~------------------- 107 (339)
+++..+.+|+ ++++++|.+.. ++++||++|+.+++ .++++||+|+++++.|++..
T Consensus 63 g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 142 (407)
T 2dkj_A 63 GCEVIDRVESLAIERAKALFGAAWANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYG 142 (407)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEEC
T ss_pred CchHHHHHHHHHHHHHHHHhCCCcceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecC
Confidence 4565556664 99999998876 56789998987644 47899999999988765441
Q ss_pred --------------HHHH--------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-----CcccCCCeEEE
Q 019543 108 --------------RLLS--------------------RKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVM 148 (339)
Q Consensus 108 --------------~~~~--------------------~~I~~la~~~g~~livD~a~a~g~~~-----~~~~~~~Di~~ 148 (339)
..+. ++|.++|++||+++|+|++|+.|... .... ..|+++
T Consensus 143 ~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~ 221 (407)
T 2dkj_A 143 VRPDTELIDLEEVRRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAHVVT 221 (407)
T ss_dssp CCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCSEEE
T ss_pred CCcccCccCHHHHHHHHhhcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc-cccEEE
Confidence 0000 99999999999999999999764321 1122 379999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC-CCCChHHHHHHHhch-----hhHHHHHHHHHHHHHHHHHHHh
Q 019543 149 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 149 ~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~-~~~~~~~a~~~~~~l-----~~~~~r~~~~~~~a~~l~~~L~ 222 (339)
+|+||+++|+ .||+++++++++.+.++.....+. ...++...+.+...+ +.++...++..++.+++.+.|+
T Consensus 222 ~s~sK~l~g~---~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 298 (407)
T 2dkj_A 222 STTHKTLRGP---RGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELA 298 (407)
T ss_dssp EESSGGGCCC---SCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccccCCCC---CceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999853 368998874577777776553332 233443222222222 3346667778888999999998
Q ss_pred CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCCcceeecccCCcccceeccccccCCCCCH
Q 019543 223 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 301 (339)
Q Consensus 223 ~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~ 301 (339)
++ +++.+ .| .+.++++++.+.+. ....++.+.|...|+.++.|.... |...+
T Consensus 299 ~~-g~~~~-~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~---------~~~~~- 351 (407)
T 2dkj_A 299 RR-GYRIV-TG---------------GTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPF---------DPKPP- 351 (407)
T ss_dssp HT-TCEEG-GG---------------SCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTT---------CSSCT-
T ss_pred hC-Cceee-cC---------------CCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCcc---------ccccc-
Confidence 87 54321 11 12467888887521 134567777777788887664210 10000
Q ss_pred HHHHhCCCCCCeEEEEec--------cCCHHHHHHHHHHHHhc
Q 019543 302 EVRQARGLTEDLVRISVG--------IEDVNDLISDLDKALRT 336 (339)
Q Consensus 302 ~~~~~~g~~~~~lRisvg--------~e~~~~li~~l~~al~~ 336 (339)
..++.+|+|++ .++.+.+++.|.+++++
T Consensus 352 -------~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 352 -------RVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp -------TTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred -------cCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 12467999984 45667777777776654
No 100
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.80 E-value=8.6e-19 Score=166.31 Aligned_cols=239 Identities=15% Similarity=0.145 Sum_probs=158.0
Q ss_pred CcccCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hc-------CCCCEEEEcCCCccchHH----------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LL-------GTGEEIVAGDDLYGGTDR---------- 108 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll-------~~GD~Vi~~~~~y~~~~~---------- 108 (339)
+.+++..++..++|++++++++|.+++++++||++|+..++. +. .++|+|++.++.|++...
T Consensus 70 ~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 149 (395)
T 3nx3_A 70 HTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEK 149 (395)
T ss_dssp CCCTTSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHH
T ss_pred ccccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcc
Confidence 445556688999999999999999999999999999985443 32 468999999988865320
Q ss_pred ---------------------HHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCc
Q 019543 109 ---------------------LLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLS 137 (339)
Q Consensus 109 ---------------------~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~ 137 (339)
.++ ++|.++|++||+++|+||+|. .|..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g 229 (395)
T 3nx3_A 150 YQKPFKPLISGVKFAKYNDISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSG 229 (395)
T ss_dssp HHGGGCSCCSCEEEECTTCHHHHHTTCCTTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred cccccCCCCCCcEEeCCCCHHHHHHhccCCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCC
Confidence 011 889999999999999999986 33222
Q ss_pred Cc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhH-HHHHHHHHHhcCCCCChHHHHHHHhchhhH--HHHHHH
Q 019543 138 RP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEK 209 (339)
Q Consensus 138 ~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l-~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~--~~r~~~ 209 (339)
.. .....|++ |+||++++ | ...|++++++ ++ .+.++......+...+++.++.+...++.+ +...++
T Consensus 230 ~~~~~~~~~~~~d~~--t~sK~~~~-G-~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~ 304 (395)
T 3nx3_A 230 KFFAYEHAQILPDIM--TSAKALGC-G-LSVGAFVINQ-KVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILEN 304 (395)
T ss_dssp SSSGGGGGTCCCSEE--EECGGGTT-T-SCCEEEEECH-HHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cchhHHhcCCCCCEE--EecccccC-C-CceEEEEEch-hhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHH
Confidence 11 12234554 67899986 4 4567887765 55 555543222234556777777666666543 233455
Q ss_pred HHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcc
Q 019543 210 QQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVK 285 (339)
Q Consensus 210 ~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~ 285 (339)
.+++.+++.+.|++ ++.+..+ ++.+.+++|.+.+...+.++.+.|...|+.++.+
T Consensus 305 ~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~--- 363 (395)
T 3nx3_A 305 VNKLTPYLEQSLDELINEFDFCKKR------------------KGLGFMQGLSLDKSVKVAKVIQKCQENALLLISC--- 363 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEECTTSCHHHHHHHHHHTTEECEEE---
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEE------------------EeEEEEEEEEeCCcchHHHHHHHHHHCCCEEecC---
Confidence 55566666665543 3433211 2256788998865445667888887777765532
Q ss_pred cceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 286 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 286 s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.++.+||++++..+++.++.+.++|+
T Consensus 364 ------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~ 389 (395)
T 3nx3_A 364 ------------------------GENDLRFLPPLILQKEHIDEMSEKLR 389 (395)
T ss_dssp ------------------------TTTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred ------------------------CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 23689999887766665555555554
No 101
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.80 E-value=9e-18 Score=158.37 Aligned_cols=222 Identities=15% Similarity=0.046 Sum_probs=151.2
Q ss_pred hHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------------
Q 019543 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------------- 111 (339)
...+|++.++++++.+ ++++++||++|+.+++ .++++||+|+++++.|++....++
T Consensus 62 ~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 141 (381)
T 1v2d_A 62 GLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLD 141 (381)
T ss_dssp CCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECC
T ss_pred CCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcC
Confidence 5789999999999864 7888889999998654 578999999999988876542211
Q ss_pred ---------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c-c--cCCCeEEEeccc
Q 019543 112 ---------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P-L--ELGADIVMHSAT 152 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~-~--~~~~Di~~~S~s 152 (339)
++|+++|++||+++|+|++|+.+.++. . . ..+.|++++|+|
T Consensus 142 ~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~s 221 (381)
T 1v2d_A 142 LSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAG 221 (381)
T ss_dssp HHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHH
T ss_pred HHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeech
Confidence 889999999999999999997654321 1 1 236799999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh------hHHHHHHHHHHHHHHHHHHHhCCCC
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK------TMALRVEKQQDNAQKIAEFLASHPR 226 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~------~~~~r~~~~~~~a~~l~~~L~~~~~ 226 (339)
|+++.+| ...|++++++ ++++.++......+...++...+.+...|+ .++...++..++.+++.+.|++. +
T Consensus 222 K~~~~~G-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 298 (381)
T 1v2d_A 222 KRLEATG-YRVGWIVGPK-EFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-G 298 (381)
T ss_dssp HHTTCGG-GCCEEEECCT-TTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred hhcCCcc-cceEEEEeCH-HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-C
Confidence 9998655 4567888865 678887766554455556654443333333 23455666778888898888874 4
Q ss_pred ceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHh
Q 019543 227 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 306 (339)
Q Consensus 227 i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~ 306 (339)
++. ..| ..+.++++.+.+.+ +.+.++..|+.++.|..+.. .+
T Consensus 299 ~~~-~~~----------------~~~~~~~~~~~~~~----~~~~l~~~gi~v~~g~~~~~--~~--------------- 340 (381)
T 1v2d_A 299 LRV-YVP----------------EGTYFLMAELPGWD----AFRLVEEARVALIPASAFYL--ED--------------- 340 (381)
T ss_dssp CCE-ECC----------------SBSSEEEEECTTCC----HHHHHHHTCEECEEGGGGCS--SS---------------
T ss_pred CEe-cCC----------------CcceEEEEecChHh----HHHHHHhCCEEEecchHhCC--CC---------------
Confidence 432 212 02456777775332 33445566887765542210 00
Q ss_pred CCCCCCeEEEEecc
Q 019543 307 RGLTEDLVRISVGI 320 (339)
Q Consensus 307 ~g~~~~~lRisvg~ 320 (339)
..++.+|||++.
T Consensus 341 --~~~~~iRi~~~~ 352 (381)
T 1v2d_A 341 --PPKDLFRFAFCK 352 (381)
T ss_dssp --CCTTEEEEECCS
T ss_pred --CCCCEEEEEeCC
Confidence 134789999997
No 102
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.80 E-value=1.8e-18 Score=162.58 Aligned_cols=254 Identities=13% Similarity=0.067 Sum_probs=158.4
Q ss_pred CchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHHH-hc----CCCCEEEEcCCCccchHHHH---H------------
Q 019543 54 NPTRDALESLLAKLDKAD--RALCFTSGMAALAAVTH-LL----GTGEEIVAGDDLYGGTDRLL---S------------ 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il~-ll----~~GD~Vi~~~~~y~~~~~~~---~------------ 111 (339)
.+..++|++.+++++|.+ ++++++||++|+.+++. +. ++||+|+++++.|++....+ .
T Consensus 43 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 122 (384)
T 1eg5_A 43 NLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVD 122 (384)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBC
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccC
Confidence 456789999999999975 78888899999986544 54 79999999999987654322 1
Q ss_pred ------------------------------------HHHHHHHHHcC--CEEEEeCCcCCCCCc-CcccCCCeEEEeccc
Q 019543 112 ------------------------------------RKIAEMAHAHG--ALLLVDNSIMSPVLS-RPLELGADIVMHSAT 152 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g--~~livD~a~a~g~~~-~~~~~~~Di~~~S~s 152 (339)
++|.++|++|| ++||+|++|+.+... +....+.|++++|+|
T Consensus 123 ~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~s 202 (384)
T 1eg5_A 123 SRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAH 202 (384)
T ss_dssp TTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGG
T ss_pred CCCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHH
Confidence 99999999999 999999999865432 212346899999999
Q ss_pred cccccCCCceEEEEEEcChhH--HHHHHHH---HHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHHHHhC
Q 019543 153 KFIAGHSDVMAGVLAVKGERL--AKELYFL---QNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l--~~~l~~~---~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~~L~~ 223 (339)
|+++.+| .|+++++++ + ...+... ........++...+.+...++ .++...++..++++++.+.|++
T Consensus 203 K~~g~~G---~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 278 (384)
T 1eg5_A 203 KFHGPKG---VGITYIRKG-VPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN 278 (384)
T ss_dssp GGTSCTT---CEEEEECTT-SCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCCCc---eEEEEEcCC-CccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC
Confidence 9977544 378888763 3 1111110 011223445544433333333 3455677778889999999987
Q ss_pred CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCccccee-ccccccCCCCCHH
Q 019543 224 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLIS-MPCFMSHASIPVE 302 (339)
Q Consensus 224 ~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~-~p~~~~h~~~~~~ 302 (339)
++++. ..|. . .+.+.+++|.+.+. ...++.+.|...|+.++.|..+.... .|. .
T Consensus 279 -~g~~~-~~~~--~-----------~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~---------~ 333 (384)
T 1eg5_A 279 -LGAHI-ITPL--E-----------ISLPNTLSVSFPNI-RGSTLQNLLSGYGIYVSTSSACTSKDERLR---------H 333 (384)
T ss_dssp -TTCEE-CSCT--T-----------SBCTTEEEEECTTC-CHHHHHHHHHHTTEECBC---------------------C
T ss_pred -CCeEE-eCCc--c-----------cCCCCEEEEEeCCC-CHHHHHHHHhhCCeEEeccccccCCCCcch---------H
Confidence 56542 2221 0 11345777876432 34567777777899888765322110 010 1
Q ss_pred HHHhCCCC----CCeEEEEeccCCH----HHHHHHHHHHHhc
Q 019543 303 VRQARGLT----EDLVRISVGIEDV----NDLISDLDKALRT 336 (339)
Q Consensus 303 ~~~~~g~~----~~~lRisvg~e~~----~~li~~l~~al~~ 336 (339)
....+|++ ++.+|||++...+ +.+++.|.+++++
T Consensus 334 ~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 375 (384)
T 1eg5_A 334 VLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSF 375 (384)
T ss_dssp HHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 12233433 4689999995444 4445555555443
No 103
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.80 E-value=3.5e-18 Score=162.63 Aligned_cols=242 Identities=14% Similarity=0.104 Sum_probs=158.1
Q ss_pred CchHHHHHHHHHhHhCCCe--EE-EcCcHHHHHHHH-HHhcCCCCEEEEcCCCccc--hHHHHH----------------
Q 019543 54 NPTRDALESLLAKLDKADR--AL-CFTSGMAALAAV-THLLGTGEEIVAGDDLYGG--TDRLLS---------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~--~l-~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~--~~~~~~---------------- 111 (339)
.+..+++++++++++|.+. .+ +++||++|+.++ ..+++|||+|+++++.|.+ ....++
T Consensus 43 ~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 122 (416)
T 3isl_A 43 TGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTV 122 (416)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCCCCC
Confidence 4568899999999999753 44 567888999854 4589999999999998876 322222
Q ss_pred ---------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEecccccccc
Q 019543 112 ---------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 157 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g 157 (339)
++|.++|++||+++|+|++|+.+... +....++|++++|++|+++|
T Consensus 123 ~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~g 202 (416)
T 3isl_A 123 FDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSV 202 (416)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCC
T ss_pred CCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCccccCC
Confidence 99999999999999999999877543 22345789999999999776
Q ss_pred CCCceEEEEEEcChhHHHHHHHHH--------------------------------H------hcCCCCChHHHHHHHhc
Q 019543 158 HSDVMAGVLAVKGERLAKELYFLQ--------------------------------N------AEGSGLAPFDCWICLRG 199 (339)
Q Consensus 158 ~~~~~gG~v~~~~~~l~~~l~~~~--------------------------------~------~~~~~~~~~~a~~~~~~ 199 (339)
+.+ .|++++++ ++++.+.... . ......+....+.+...
T Consensus 203 ~~g--~g~~~~~~-~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 279 (416)
T 3isl_A 203 PSG--MAPITYNE-RVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREG 279 (416)
T ss_dssp CSS--EEEEEECH-HHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHH
T ss_pred CCC--eEEEEECH-HHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHH
Confidence 543 57777764 6766665211 0 01122333332222222
Q ss_pred hh---h--HHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCc
Q 019543 200 VK---T--MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY 274 (339)
Q Consensus 200 l~---~--~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~ 274 (339)
++ . ++...++..++++++.+.|++. +++.. .|. ....+.+++|.+.+.....++.+.|..
T Consensus 280 l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~-------------~~~~~~~~~~~~~~~~~~~~l~~~L~~ 344 (416)
T 3isl_A 280 VRLVLEEGLETRFERHRHHEAALAAGIKAM-GLRLF-GDD-------------SCKMPVVTCVEIPGGIDGESVRDMLLA 344 (416)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBC-SCG-------------GGBCTTEEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEec-cCc-------------cccCCcEEEEeCCCCCCHHHHHHHHHH
Confidence 22 2 4566777778888999999874 44321 110 011357888887533345677887755
Q ss_pred c-eeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEecc----CC-HHHHHHHHHHHHhc
Q 019543 275 F-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----ED-VNDLISDLDKALRT 336 (339)
Q Consensus 275 ~-~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~----e~-~~~li~~l~~al~~ 336 (339)
. |+.++.|. .+ ..++.+|||++. ++ .+.+++.|.+++++
T Consensus 345 ~~gi~v~~g~------~~-----------------~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~ 389 (416)
T 3isl_A 345 QFGIEIASSF------GP-----------------LAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLR 389 (416)
T ss_dssp HHCEECBCCC------ST-----------------TTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred hCCEEEecCC------CC-----------------CCCCEEEEecccCCCcHHHHHHHHHHHHHHHHH
Confidence 4 88887653 11 145789999933 23 45555666665554
No 104
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.79 E-value=4.4e-18 Score=161.83 Aligned_cols=242 Identities=16% Similarity=0.147 Sum_probs=159.3
Q ss_pred hHHHHHHHHHhHh----C----CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHH-----------------
Q 019543 56 TRDALESLLAKLD----K----ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRL----------------- 109 (339)
Q Consensus 56 ~~~~le~~la~~~----g----~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~----------------- 109 (339)
...+|++.+++++ | .++++++++|++|+.+++ .++++||+|+++.+.|++....
T Consensus 76 ~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~ 155 (407)
T 2zc0_A 76 GIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDNDG 155 (407)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCCC
Confidence 4678888888887 7 346777777799998654 4789999999999887654311
Q ss_pred ----------H-------H-----------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCc---c-cC--
Q 019543 110 ----------L-------S-----------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRP---L-EL-- 142 (339)
Q Consensus 110 ----------~-------~-----------------------~~I~~la~~~g~~livD~a~a~g~~-~~~---~-~~-- 142 (339)
- + ++|+++|++||+++|+|++|+.+.. +.. + ..
T Consensus 156 ~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 235 (407)
T 2zc0_A 156 MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDN 235 (407)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCS
T ss_pred CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCC
Confidence 1 1 5999999999999999999986543 111 1 11
Q ss_pred -CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh-------HHHHHHHHHHHH
Q 019543 143 -GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-------MALRVEKQQDNA 214 (339)
Q Consensus 143 -~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~-------~~~r~~~~~~~a 214 (339)
+.+++++|+||+++ +| ..+|+++++ +++.+.++......+...++....++...++. ++...++..++.
T Consensus 236 ~~~~i~~~s~sK~~~-~G-~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 312 (407)
T 2zc0_A 236 EGRVIVAGTLSKVLG-TG-FRIGWIIAE-GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKR 312 (407)
T ss_dssp SCCEEEEEESTTTTC-TT-SCCEEEECC-HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHH
T ss_pred CCCEEEEcccccccC-CC-cceEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 34689999999999 44 457888886 57888777665444444566554444333332 233455566777
Q ss_pred HHHHHHHhC-CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcc-eeecccCCcccceeccc
Q 019543 215 QKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPC 292 (339)
Q Consensus 215 ~~l~~~L~~-~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~-~i~v~~G~~~s~~~~p~ 292 (339)
+++.+.|++ .+++.. ..| ..+.++++.+.+.....++.+.|... |+.++.|..+.. +
T Consensus 313 ~~l~~~L~~~~~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~---~- 371 (407)
T 2zc0_A 313 DIMLKALENHLPNAEF-TKP----------------IAGMFVMFFLPEGADGISFANELMEREGVVVVPGKPFYT---D- 371 (407)
T ss_dssp HHHHHHHHHHCTTSCB-CCC----------------SBSSEEEEECSTTCCHHHHHHHHHHHTCEECBCSGGGCS---S-
T ss_pred HHHHHHHHHhCCCCEE-ecC----------------CCcEEEEEEcCCCCCHHHHHHHHHHhCCeEEECchhccC---C-
Confidence 888888876 455432 112 13457788875322345677777666 888876643210 0
Q ss_pred cccCCCCCHHHHHhCCCCCCeEEEEecc---CCHHHHHHHHHHHHhc
Q 019543 293 FMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRT 336 (339)
Q Consensus 293 ~~~h~~~~~~~~~~~g~~~~~lRisvg~---e~~~~li~~l~~al~~ 336 (339)
+..++.+|||++. ++.+..++.|.+++++
T Consensus 372 ---------------~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 403 (407)
T 2zc0_A 372 ---------------ESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKE 403 (407)
T ss_dssp ---------------SCCTTEEEEECSSSCTTHHHHHHHHHHHHHHH
T ss_pred ---------------CCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 0134789999986 4456666777766654
No 105
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.79 E-value=2e-18 Score=161.02 Aligned_cols=240 Identities=18% Similarity=0.164 Sum_probs=156.2
Q ss_pred chHHHHHHHHHhHhCCC----eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCC-ccchH-HHHH----------------
Q 019543 55 PTRDALESLLAKLDKAD----RALCFTSGMAALAAVT-HLLGTGEEIVAGDDL-YGGTD-RLLS---------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~----~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~-y~~~~-~~~~---------------- 111 (339)
+..+++++++++++|.+ ++++++||++|+.+++ .++++||+|++.++. |+... ....
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 116 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVAR 116 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCC
Confidence 67899999999999943 5888899999998654 477899998776543 33221 1111
Q ss_pred ----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcc-cCCCeEEEeccccccc
Q 019543 112 ----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPL-ELGADIVMHSATKFIA 156 (339)
Q Consensus 112 ----------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~-~~~~Di~~~S~sK~l~ 156 (339)
++|.++|++||+++|+|++|+.+.....+ ..+.|++++|+||+++
T Consensus 117 ~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~ 196 (366)
T 1m32_A 117 PDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQ 196 (366)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTC
T ss_pred CCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCccccc
Confidence 99999999999999999999876543222 3468999999999986
Q ss_pred cCCCceEEEEEEcChhHHHHHHHH------------HHh--c-C---CCCChHHHHHHHhchhh------HHHHHHHHHH
Q 019543 157 GHSDVMAGVLAVKGERLAKELYFL------------QNA--E-G---SGLAPFDCWICLRGVKT------MALRVEKQQD 212 (339)
Q Consensus 157 g~~~~~gG~v~~~~~~l~~~l~~~------------~~~--~-~---~~~~~~~a~~~~~~l~~------~~~r~~~~~~ 212 (339)
++.+ .|++++++ ++.+.++.. ... . + ...++...+.+...++. ++...++.++
T Consensus 197 ~~~g--~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~ 273 (366)
T 1m32_A 197 GVPG--FAFVIARE-QKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQ 273 (366)
T ss_dssp CCSS--EEEEEEEH-HHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCCc--eEEEEECH-HHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHH
Confidence 5532 38888875 555443221 000 0 1 24454443333333333 3456677778
Q ss_pred HHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--HHHHHHHHccCCcceeecccCCcccceec
Q 019543 213 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISM 290 (339)
Q Consensus 213 ~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--~~~~~~~~~~L~~~~i~v~~G~~~s~~~~ 290 (339)
+++++.+.|+++ +++. ..|. . ...+.+++|.+.+ .....++.+.|...|+.++.|..
T Consensus 274 ~~~~l~~~L~~~-~~~~-~~~~---~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~------ 332 (366)
T 1m32_A 274 NQRSLVAGMRAL-GFNT-LLDD---E----------LHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKV------ 332 (366)
T ss_dssp HHHHHHHHHHHT-TCCB-SSCG---G----------GBCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCC------
T ss_pred HHHHHHHHHHHC-CCee-ccCc---h----------hcCceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCcC------
Confidence 889999999876 4431 1110 0 0123488888753 23356677777777887765431
Q ss_pred cccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 291 PCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 291 p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+ .++.+|+|++..++++.++.+.++|++
T Consensus 333 ~------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~ 360 (366)
T 1m32_A 333 S------------------QSDCFRIGNIGEVYAADITALLTAIRT 360 (366)
T ss_dssp S------------------SSCEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred C------------------CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 1 236899999987666666666666653
No 106
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.79 E-value=4.7e-18 Score=162.22 Aligned_cols=240 Identities=9% Similarity=0.052 Sum_probs=153.8
Q ss_pred chHHHHHHHHHhHhC--------------CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH--------
Q 019543 55 PTRDALESLLAKLDK--------------ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS-------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g--------------~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~-------- 111 (339)
....+|++.++++++ .++++++++|++|+.+++ .+++|||+|+++++.|++....+.
T Consensus 75 ~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~ 154 (416)
T 1bw0_A 75 VGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHF 154 (416)
T ss_dssp TCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEE
Confidence 346788888888877 457888888899998644 578999999999998887653322
Q ss_pred ---------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cC-------
Q 019543 112 ---------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SR------- 138 (339)
Q Consensus 112 ---------------------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~------- 138 (339)
++|+++|++||++||+|++|+...+ +.
T Consensus 155 v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 234 (416)
T 1bw0_A 155 YNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFT 234 (416)
T ss_dssp EEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCC
T ss_pred eecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCcc
Confidence 8899999999999999999976322 11
Q ss_pred cc-cC---CCeEEEeccccccccCCCceEEEEEEcCh-hHHHHHHH-HHH--hcCCCCChHHHHHHHhchh-----hHHH
Q 019543 139 PL-EL---GADIVMHSATKFIAGHSDVMAGVLAVKGE-RLAKELYF-LQN--AEGSGLAPFDCWICLRGVK-----TMAL 205 (339)
Q Consensus 139 ~~-~~---~~Di~~~S~sK~l~g~~~~~gG~v~~~~~-~l~~~l~~-~~~--~~~~~~~~~~a~~~~~~l~-----~~~~ 205 (339)
.+ .. +.+++++|+||+++.+| ...|+++++++ ++.+.+.. .+. ......++...+.+...|+ .++.
T Consensus 235 ~~~~~~~~~~~i~~~s~sK~~~~~G-lr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 313 (416)
T 1bw0_A 235 SVADFETTVPRVILGGTAKNLVVPG-WRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQ 313 (416)
T ss_dssp CTTSSCCSCCEEEEEESTTTTSCGG-GCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHH
T ss_pred CHHHccCCCcEEEEecchhhCCCCC-ceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHH
Confidence 11 11 22588899999998765 44578877764 34443331 111 1233456655544444343 3456
Q ss_pred HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-----HHHHHHHccC-Ccceeec
Q 019543 206 RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVVETT-KYFSITV 279 (339)
Q Consensus 206 r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-----~~~~~~~~~L-~~~~i~v 279 (339)
..++.+++.+++.+.|+++|++.. ..|. .+..+++.+... ....++++.| +..|+.+
T Consensus 314 ~~~~~~~~~~~l~~~L~~~~g~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 376 (416)
T 1bw0_A 314 IVAKIEESAMYLYNHIGECIGLAP-TMPR----------------GAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQV 376 (416)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTEEE-CCCC----------------BTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcc-cCCC----------------eeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEE
Confidence 677778889999999998877642 2221 245666666421 2345677766 4678887
Q ss_pred ccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Q 019543 280 SFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE--DVNDLISDLDKALR 335 (339)
Q Consensus 280 ~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e--~~~~li~~l~~al~ 335 (339)
+.|..+. .++.+|||++.. +.++.++.|.++++
T Consensus 377 ~~g~~f~-----------------------~~~~iRis~~~~~e~l~~~l~~l~~~l~ 411 (416)
T 1bw0_A 377 LPGTIFH-----------------------APGFTRLTTTRPVEVYREAVERIKAFCQ 411 (416)
T ss_dssp EEGGGGT-----------------------CTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred ecccccC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 7554211 136899999742 22333444444443
No 107
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.79 E-value=7.7e-18 Score=161.67 Aligned_cols=225 Identities=14% Similarity=0.099 Sum_probs=149.3
Q ss_pred chHHHHHHHHHhHh----CC--CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHH-----------------H
Q 019543 55 PTRDALESLLAKLD----KA--DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLL-----------------S 111 (339)
Q Consensus 55 ~~~~~le~~la~~~----g~--~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~-----------------~ 111 (339)
+...+|++.+++++ +. +.+++++++++++.++..+++|||+|+++++.|.+....+ +
T Consensus 98 ~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 177 (432)
T 3ei9_A 98 QGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGN 177 (432)
T ss_dssp TCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHHHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETT
T ss_pred CCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHHHHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCc
Confidence 45678999999985 43 3566666667888776678899999999999987654321 1
Q ss_pred -------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---cc-c---
Q 019543 112 -------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---PL-E--- 141 (339)
Q Consensus 112 -------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~~-~--- 141 (339)
++|+++|++||++||+|++|+.+.... .+ .
T Consensus 178 ~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~ 257 (432)
T 3ei9_A 178 IEYMRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPG 257 (432)
T ss_dssp CEEEECCGGGTTSCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTT
T ss_pred eEEeccCcccCCcCChhhCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCC
Confidence 788889999999999999998543321 11 1
Q ss_pred -CCCeEEEeccccccccCCCceEEEEEEcChh-------HHHHHHHHHHhcCCCCChHHHHHHHhch-----hhHHHHHH
Q 019543 142 -LGADIVMHSATKFIAGHSDVMAGVLAVKGER-------LAKELYFLQNAEGSGLAPFDCWICLRGV-----KTMALRVE 208 (339)
Q Consensus 142 -~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~-------l~~~l~~~~~~~~~~~~~~~a~~~~~~l-----~~~~~r~~ 208 (339)
.+.+++++|+||++|.+|. ..|+++++++. +.+.+...........++....++...+ +.++...+
T Consensus 258 ~~~~~i~~~S~SK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 336 (432)
T 3ei9_A 258 AEEVAMETASFSNYAGFTGV-RLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIG 336 (432)
T ss_dssp GGGTEEEEEESHHHHCTTTT-CCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHH
T ss_pred CCCeEEEEecchhccCCccc-ceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHH
Confidence 1346999999999986664 45788877643 1566665554444455665444333333 33566677
Q ss_pred HHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcccc
Q 019543 209 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSL 287 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~ 287 (339)
+..++.+++.+.|+++ ++.... | ..+.++++.+++. ...++++.| +..|+.++.|..+.
T Consensus 337 ~~~~~~~~l~~~L~~~-g~~~~~-~----------------~~~~~~~~~~~~~-~~~~~~~~ll~~~gv~v~~g~~f~- 396 (432)
T 3ei9_A 337 FYKENTNIIIDTFTSL-GYDVYG-G----------------KNAPYVWVHFPNQ-SSWDVFAEILEKTHVVTTPGSGFG- 396 (432)
T ss_dssp HHHHHHHHHHHHHHHT-TCCEEE-C----------------SSSSEEEEECTTS-CHHHHHHHHHHHHCEECEEGGGGC-
T ss_pred HHHHHHHHHHHHHHHC-CceecC-C----------------CcceEEEEECCCC-CHHHHHHHHHHHCCEEEeCchHhC-
Confidence 7888899999999876 443221 1 1356788888632 234555554 34588877664321
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEecc
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 320 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~ 320 (339)
+ ..++.+|||++.
T Consensus 397 ---~-----------------~~~~~iRis~~~ 409 (432)
T 3ei9_A 397 ---P-----------------GGEGFVRVSAFG 409 (432)
T ss_dssp ---G-----------------GGTTEEEEECCS
T ss_pred ---C-----------------CCCCEEEEEecC
Confidence 1 035789999865
No 108
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.79 E-value=9.1e-19 Score=165.85 Aligned_cols=234 Identities=14% Similarity=0.161 Sum_probs=160.2
Q ss_pred CCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcCC----------CCEEEEcCCCccchH-------------
Q 019543 52 SGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLGT----------GEEIVAGDDLYGGTD------------- 107 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~~----------GD~Vi~~~~~y~~~~------------- 107 (339)
+.++..+++++++++++|.+++++++||++|+.+++. +..+ ||+|++..+.|++..
T Consensus 75 ~~~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 154 (392)
T 3ruy_A 75 FHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYK 154 (392)
T ss_dssp SEETTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTT
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhc
Confidence 4568899999999999999999999999999975443 3333 789999988885321
Q ss_pred ------------------HHHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCc
Q 019543 108 ------------------RLLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRP 139 (339)
Q Consensus 108 ------------------~~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~ 139 (339)
..++ ++|.++|++||+++|+|++|+ .+..+..
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~ 234 (392)
T 3ruy_A 155 RGFGPMLPGIIVIPYGDLEALKAAITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKV 234 (392)
T ss_dssp TTCCSCCSSEEEECTTCHHHHHHHCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSS
T ss_pred cccCCCCCCCeeeCcccHHHHHHHhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccc
Confidence 0111 889999999999999999995 3322221
Q ss_pred c-----cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH--HHHHHHHHH
Q 019543 140 L-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQD 212 (339)
Q Consensus 140 ~-----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~--~~r~~~~~~ 212 (339)
. ....|++ |+||+++| |...+|++++++ ++.+.+.......+...++..++.+...++.+ +...++.++
T Consensus 235 ~~~~~~~~~~d~~--~~SK~l~g-G~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 310 (392)
T 3ruy_A 235 FACDWDNVTPDMY--ILGKALGG-GVFPISCAAANR-DILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQ 310 (392)
T ss_dssp SGGGGGTCCCSEE--EECGGGGT-TTSCCEEEEECH-HHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred hhhhccCCCCCEE--EEchhhhC-ChhhhEEEEECH-HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 1 2335766 56799986 314567888864 56655544333334566777777666666654 345666778
Q ss_pred HHHHHHHHHhCCC--CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceec
Q 019543 213 NAQKIAEFLASHP--RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISM 290 (339)
Q Consensus 213 ~a~~l~~~L~~~~--~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~ 290 (339)
+.+++.+.|+++. .+..+ .+.++++++.+++ ...++.+.|...|+.++.|
T Consensus 311 ~~~~l~~~L~~~~~~~~~~~------------------~~~g~~~~~~~~~--~~~~l~~~l~~~gi~v~~~-------- 362 (392)
T 3ruy_A 311 LGEKLVGQLKEIDNPMITEV------------------RGKGLFIGIELNE--PARPYCEQLKAAGLLCKET-------- 362 (392)
T ss_dssp HHHHHHHHHTTCCCTTEEEE------------------EEETTEEEEEESS--CSHHHHHHHHTTTEECCCB--------
T ss_pred HHHHHHHHHHHhcCCCceEE------------------EeeeeEEEEEEcc--hHHHHHHHHHHCCcEEecC--------
Confidence 8888999998763 22111 1246788888754 4456777777778776533
Q ss_pred cccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 291 PCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 291 p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.++.+|++++...+++.++.+.++|++
T Consensus 363 -------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~ 389 (392)
T 3ruy_A 363 -------------------HENVIRIAPPLVISEEDLEWAFQKIKA 389 (392)
T ss_dssp -------------------TTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred -------------------CCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 136799998877777766766666654
No 109
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.79 E-value=4.4e-18 Score=160.76 Aligned_cols=242 Identities=13% Similarity=0.056 Sum_probs=155.4
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchH--HHHH------------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTD--RLLS------------------ 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~--~~~~------------------ 111 (339)
+..+++++.+++++|.+ .+++++||++|+.+++ .+++|||+|+++++.|++.. .+..
T Consensus 42 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 121 (392)
T 2z9v_A 42 LLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAID 121 (392)
T ss_dssp HHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCC
Confidence 45789999999999974 6777788899998654 47899999999988876542 1111
Q ss_pred --------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccccC
Q 019543 112 --------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGH 158 (339)
Q Consensus 112 --------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g~ 158 (339)
++|.++|++||+++|+|++|+.|... +....+.|++++|+||+++++
T Consensus 122 ~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~ 201 (392)
T 2z9v_A 122 PQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAP 201 (392)
T ss_dssp HHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCC
T ss_pred HHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccCC
Confidence 99999999999999999999876542 222346899999999988765
Q ss_pred CCceEEEEEEcChhHHHHHHHHH--------------------HhcCCCCChHHHHHHHhchhh-----HHHHHHHHHHH
Q 019543 159 SDVMAGVLAVKGERLAKELYFLQ--------------------NAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDN 213 (339)
Q Consensus 159 ~~~~gG~v~~~~~~l~~~l~~~~--------------------~~~~~~~~~~~a~~~~~~l~~-----~~~r~~~~~~~ 213 (339)
.+. |++++++ ++++.++... .......+....+.+...++. ++...++..++
T Consensus 202 ~g~--G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~ 278 (392)
T 2z9v_A 202 PGL--TMMGVSE-RAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALT 278 (392)
T ss_dssp SCC--EEEEECH-HHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred Cce--eEEEECH-HHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 332 7887764 6666665311 011122333322222222322 34556777788
Q ss_pred HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcc-eeecccCCcccceeccc
Q 019543 214 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPC 292 (339)
Q Consensus 214 a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~-~i~v~~G~~~s~~~~p~ 292 (339)
++++.+.|+++ +++. ..|. .. ...+++++|.+++.....++.+.|... |+.++.|.. +
T Consensus 279 ~~~l~~~L~~~-g~~~-~~~~---~~---------~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~------~- 337 (392)
T 2z9v_A 279 AKAMRAGVTAM-GLSV-WAAS---DS---------IASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRG------E- 337 (392)
T ss_dssp HHHHHHHHHHT-TCCB-SSSS---GG---------GBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCG------G-
T ss_pred HHHHHHHHHHc-CCee-ccCC---cc---------ccCCceEEEECCCCCCHHHHHHHHHhcCCEEEecCCC------C-
Confidence 88898988876 5432 1111 00 013568888875322345677777765 888775531 1
Q ss_pred cccCCCCCHHHHHhCCCCCCeEEEEe-cc----CCHHHHHHHHHHHHhc
Q 019543 293 FMSHASIPVEVRQARGLTEDLVRISV-GI----EDVNDLISDLDKALRT 336 (339)
Q Consensus 293 ~~~h~~~~~~~~~~~g~~~~~lRisv-g~----e~~~~li~~l~~al~~ 336 (339)
..++.+|||+ +. ++.+.+++.|.+++++
T Consensus 338 ----------------~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~ 370 (392)
T 2z9v_A 338 ----------------TLGKLTRIGHMGPTAQPIYAIAALTALGGAMNA 370 (392)
T ss_dssp ----------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred ----------------CCCCeEEEeCcccccCHHHHHHHHHHHHHHHHH
Confidence 0347899995 52 3344445555555543
No 110
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.79 E-value=4.9e-18 Score=157.17 Aligned_cols=230 Identities=13% Similarity=0.078 Sum_probs=152.3
Q ss_pred CCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 53 GNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
.++...+|++.+++++|.+ +.++++++++++.+++..+ +||+|+++++.|.+....++
T Consensus 49 ~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~-~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~ 127 (337)
T 3p1t_A 49 PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF-SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDP 127 (337)
T ss_dssp CTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS-TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCH
T ss_pred CCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc-CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCH
Confidence 4678899999999999975 4555555578888766655 99999999999987765443
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--ccc-CCCeEEEeccccccccCCCc
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR--PLE-LGADIVMHSATKFIAGHSDV 161 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a~a~g~~~~--~~~-~~~Di~~~S~sK~l~g~~~~ 161 (339)
++|.++|+++++ +|+|++|+...... ... .+.+++++|+||+++.+|.
T Consensus 128 ~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~- 205 (337)
T 3p1t_A 128 NDLAQVSRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGL- 205 (337)
T ss_dssp HHHTTCCTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTT-
T ss_pred HHHHhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhccCcch-
Confidence 899999999997 66799997422111 111 2457999999999986554
Q ss_pred eEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhch---hhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCC
Q 019543 162 MAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 238 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l---~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~ 238 (339)
..|++++++ ++.+.++... .....++.....+...+ +.+..++++..++.+++.+.|+++ ++.. +|
T Consensus 206 r~G~~~~~~-~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~----- 274 (337)
T 3p1t_A 206 RLGALFGPS-ELIAAMKRKQ--WFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRV--AS----- 274 (337)
T ss_dssp CCEEEECCH-HHHHHHHTTS--CTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCB--CC-----
T ss_pred heEEEEeCH-HHHHHHHhhc--CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCEE--CC-----
Confidence 457887764 6777665432 22344554433333333 345566777777888899999876 4321 12
Q ss_pred CchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe
Q 019543 239 PGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 318 (339)
Q Consensus 239 ~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv 318 (339)
..++++++...+.+ .+.+.|+..|+.++.|..+. .++.+|||+
T Consensus 275 -----------~~~~~~~~~~~~~~---~~~~~l~~~gi~v~~g~~~~-----------------------~~~~iRis~ 317 (337)
T 3p1t_A 275 -----------SEANFVLVENAAGE---RTLRFLRERGIQVKDAGQFG-----------------------LHHHIRISI 317 (337)
T ss_dssp -----------CSSSEEEEECTTTH---HHHHHHHHTTEECEEGGGGT-----------------------CCSEEEEEC
T ss_pred -----------CCCeEEEEEcCCHH---HHHHHHHHCCeEEEECccCC-----------------------CCCeEEEec
Confidence 14567888765433 34445666788887664321 136899999
Q ss_pred ccCCHHHHHHHHHHHHhc
Q 019543 319 GIEDVNDLISDLDKALRT 336 (339)
Q Consensus 319 g~e~~~~li~~l~~al~~ 336 (339)
+. ++.++.|.++|++
T Consensus 318 ~~---~~~~~~l~~al~~ 332 (337)
T 3p1t_A 318 GR---EEDNDRLLAALAE 332 (337)
T ss_dssp CC---HHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHHHH
Confidence 94 3444555555553
No 111
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.79 E-value=5.9e-18 Score=161.20 Aligned_cols=245 Identities=19% Similarity=0.163 Sum_probs=151.5
Q ss_pred CCchHHHHHH----HHHhHhCCCeE-EEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHH------------------
Q 019543 53 GNPTRDALES----LLAKLDKADRA-LCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDR------------------ 108 (339)
Q Consensus 53 ~~~~~~~le~----~la~~~g~~~~-l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~------------------ 108 (339)
+++.++.+|+ .+++++|.+.. ++++||++|+.++ ..+++|||+|+++++.|++...
T Consensus 65 ~~~~~~~~~~~~~~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 144 (417)
T 3n0l_A 65 GCEFVDEIETLAIERCKKLFNCKFANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYG 144 (417)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEEC
T ss_pred cchHHHHHHHHHHHHHHHHhCCCCcceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEecc
Confidence 3455566665 88999998876 8899999999854 4589999999999987654221
Q ss_pred --------------HHH--------------------HHHHHHHHHcCCEEEEeCCcCCCCC-----cCcccCCCeEEEe
Q 019543 109 --------------LLS--------------------RKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMH 149 (339)
Q Consensus 109 --------------~~~--------------------~~I~~la~~~g~~livD~a~a~g~~-----~~~~~~~~Di~~~ 149 (339)
.+. ++|.++|++||++||+|++|+.|.. ...+. ..|++++
T Consensus 145 ~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~ 223 (417)
T 3n0l_A 145 VELDGRIDYEKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-YAHVVSS 223 (417)
T ss_dssp CCTTSSCCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-TCSEEEE
T ss_pred CCCCCCcCHHHHHHHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-cceEEEe
Confidence 000 9999999999999999999865533 11222 4699999
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC-CCCChHH-HHH--HHhc-h-hhHHHHHHHHHHHHHHHHHHHhC
Q 019543 150 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPFD-CWI--CLRG-V-KTMALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 150 S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~-~~~~~~~-a~~--~~~~-l-~~~~~r~~~~~~~a~~l~~~L~~ 223 (339)
|+||+++|+ .||+++++++++.+.++....... ...++.. +++ ++.. + +.+..+.++..++++++.+.|++
T Consensus 224 s~sK~l~g~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 300 (417)
T 3n0l_A 224 TTHKTLRGP---RGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD 300 (417)
T ss_dssp ESSTTTCSC---SCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCccccCCC---CeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 999999653 378999886677777765543221 1222222 221 1111 1 34567777888888999999987
Q ss_pred CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHH
Q 019543 224 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 302 (339)
Q Consensus 224 ~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~ 302 (339)
.++..+. + ...++++++.+.+. .....+.+.|+..|+.++.+... ....|.
T Consensus 301 -~g~~~~~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~-~~~~~~---------- 352 (417)
T 3n0l_A 301 -RKFKLVS-D---------------GTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVP-GEIRSP---------- 352 (417)
T ss_dssp -TTCEEGG-G---------------SCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCT-TCCSCT----------
T ss_pred -CCceecc-C---------------CCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccC-CCCccc----------
Confidence 4443211 1 12356777776421 12344555566678877643210 000010
Q ss_pred HHHhCCCCCCeEEEEecc--------CCHHHHHHHHHHHHh
Q 019543 303 VRQARGLTEDLVRISVGI--------EDVNDLISDLDKALR 335 (339)
Q Consensus 303 ~~~~~g~~~~~lRisvg~--------e~~~~li~~l~~al~ 335 (339)
..+..+|++... ++.+.+++.|.++++
T Consensus 353 ------~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~ 387 (417)
T 3n0l_A 353 ------FITSGLRLGTPALTARGFKEKEMEIVSNYIADILD 387 (417)
T ss_dssp ------TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ------CCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 134679998752 555666666666664
No 112
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.79 E-value=1.4e-18 Score=163.62 Aligned_cols=234 Identities=15% Similarity=0.091 Sum_probs=155.7
Q ss_pred CchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCC-------------CCEEEEcCCCccchHHHHH------
Q 019543 54 NPTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGT-------------GEEIVAGDDLYGGTDRLLS------ 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~-------------GD~Vi~~~~~y~~~~~~~~------ 111 (339)
.+..+++++++++++|.+ +.++++||++|+.+++ .+..+ ||+|+++++.|.++...+.
T Consensus 68 ~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~ 147 (397)
T 3f9t_A 68 KLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEY 147 (397)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCcee
Confidence 345678999999999875 5588999999997544 45554 9999999999887654332
Q ss_pred -------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC---cC-------
Q 019543 112 -------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL---SR------- 138 (339)
Q Consensus 112 -------------------------------------------~~I~~la~~~g~~livD~a~a~g~~---~~------- 138 (339)
++|.++|++||+++|+|++|+.+.. ..
T Consensus 148 ~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~ 227 (397)
T 3f9t_A 148 IYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGV 227 (397)
T ss_dssp EEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTC
T ss_pred EEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccc
Confidence 9999999999999999999975432 11
Q ss_pred --cccC--CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhc---------CCCC--ChHHHHHHHhch--h
Q 019543 139 --PLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE---------GSGL--APFDCWICLRGV--K 201 (339)
Q Consensus 139 --~~~~--~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~---------~~~~--~~~~a~~~~~~l--~ 201 (339)
+... ++|+++.|++|+++++. ..|+++++++.+.+.++...... ++.. +....+.++..+ .
T Consensus 228 ~~~~~~~~~~~~~~~s~~K~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 305 (397)
T 3f9t_A 228 NYKFDFSLGVDSITIDPHKMGHCPI--PSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGRE 305 (397)
T ss_dssp CCCCSGGGTCSEEECCTTTTTCCCS--SCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHH
T ss_pred cccccccccCCeEEEccccccCCCC--CceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHH
Confidence 1111 78999999999997543 24566666655544432211111 1111 223333333322 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeeccc
Q 019543 202 TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSF 281 (339)
Q Consensus 202 ~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~ 281 (339)
.++.+.++..++++++.+.|+++ ++..+. | ..+++++|.+.+ ..++.+.|...|+.++.
T Consensus 306 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~----------------~~~~~~~~~~~~---~~~~~~~l~~~gi~v~~ 364 (397)
T 3f9t_A 306 GQRKIVNECMENTLYLYKKLKEN-NFKPVI-E----------------PILNIVAIEDED---YKEVCKKLRDRGIYVSV 364 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TCCBSS-C----------------CSSSEEEEECTT---HHHHHHHHHHTTCBCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCEEEc-C----------------CCccEEEEEeCC---HHHHHHHHHhCCeEEec
Confidence 45667777888899999999887 543221 1 146788888765 34566667666776654
Q ss_pred CCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 282 GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 282 G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
|. .++.+||+++...+++.++.+.++|++
T Consensus 365 ~~--------------------------~~~~~Ri~~~~~~~~e~i~~~~~~l~~ 393 (397)
T 3f9t_A 365 CN--------------------------CVKALRIVVMPHIKREHIDNFIEILNS 393 (397)
T ss_dssp CS--------------------------SSSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred cC--------------------------CCCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 32 136899999987777777777777654
No 113
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.78 E-value=5.1e-18 Score=162.80 Aligned_cols=241 Identities=14% Similarity=0.130 Sum_probs=156.2
Q ss_pred hHHHHHHHHHhHh----C---C--CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHH-----------------
Q 019543 56 TRDALESLLAKLD----K---A--DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDR----------------- 108 (339)
Q Consensus 56 ~~~~le~~la~~~----g---~--~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~----------------- 108 (339)
...+|++.+++++ | . ++++++++|++|+.+++ .+++|||+|+++.+.|.+...
T Consensus 86 g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~ 165 (425)
T 1vp4_A 86 GDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD 165 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT
T ss_pred CCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC
Confidence 4567888888877 7 2 35666667789997544 578999999999987754321
Q ss_pred ---------HH----------H-----------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cC---cc--
Q 019543 109 ---------LL----------S-----------------------RKIAEMAHAHGALLLVDNSIMSPVL-SR---PL-- 140 (339)
Q Consensus 109 ---------~~----------~-----------------------~~I~~la~~~g~~livD~a~a~g~~-~~---~~-- 140 (339)
.+ + ++|+++|++||+++|+|++|+.+.+ +. .+
T Consensus 166 ~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 245 (425)
T 1vp4_A 166 GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFK 245 (425)
T ss_dssp EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHH
T ss_pred CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHH
Confidence 00 2 6899999999999999999986543 11 11
Q ss_pred --cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh------HHHHHHHHHH
Q 019543 141 --ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQD 212 (339)
Q Consensus 141 --~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~------~~~r~~~~~~ 212 (339)
..+.+++++|+||+++ +| ...|+++++ +++++.++.....++...++...+++...|+. ++...++..+
T Consensus 246 ~~~~~~~i~~~s~sK~~~-~G-~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 322 (425)
T 1vp4_A 246 IGGPERVVLLNTFSKVLA-PG-LRIGMVAGS-KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRR 322 (425)
T ss_dssp HHCTTTEEEEEESTTTTC-GG-GCEEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHH
T ss_pred hCCCCCEEEEeccccccc-cc-cceEEEeeC-HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 1245799999999998 54 567888887 47888887665544444566655555444433 3444555667
Q ss_pred HHHHHHHHHhCC-C---CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccce
Q 019543 213 NAQKIAEFLASH-P---RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLI 288 (339)
Q Consensus 213 ~a~~l~~~L~~~-~---~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~ 288 (339)
+.+++.+.|+++ + ++.. ..| +.+.++++.+.+.....++++.|...|+.++.|..+..
T Consensus 323 ~~~~l~~~L~~~~~~~~g~~~-~~~----------------~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~- 384 (425)
T 1vp4_A 323 KRTVMLNALEEYFSDIPGVKW-VKS----------------EGGLFIWLTLPEGFDTWEMFEYAKRKKVFYVPGRVFKV- 384 (425)
T ss_dssp HHHHHHHHHHHHSTTSTTCEE-CCC----------------SBSSEEEEECCTTCCTTTTHHHHHHHTEECEEGGGGCT-
T ss_pred HHHHHHHHHHHhCCCCCceEE-ecC----------------CccEEEEEEcCCCCCHHHHHHHHHHCCCEEECchhhcC-
Confidence 788888888763 4 3432 112 13567888875322234566666666887776543210
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEeccC---CHHHHHHHHHHHHh
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISVGIE---DVNDLISDLDKALR 335 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e---~~~~li~~l~~al~ 335 (339)
. +..++.+|||++.. +.++.++.|.++++
T Consensus 385 ---~---------------~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~ 416 (425)
T 1vp4_A 385 ---Y---------------DEPSPSMRLSFCLPPDEKIVEGIKRLREVVL 416 (425)
T ss_dssp ---T---------------CCCCSEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred ---C---------------CCCCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 0 01347899999974 34455555655554
No 114
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.78 E-value=1e-17 Score=161.57 Aligned_cols=239 Identities=16% Similarity=0.082 Sum_probs=155.8
Q ss_pred chHHHHHHHHHhHh----C--CCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 55 PTRDALESLLAKLD----K--ADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~----g--~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
+...+|++++++++ + .+.+++++++++|+..+..+++|||+|+++++.|.+....+.
T Consensus 111 ~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~ 190 (449)
T 3qgu_A 111 QGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARIQMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIE 190 (449)
T ss_dssp TCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHHHHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEE
T ss_pred CCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHHHHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeE
Confidence 44789999999997 3 346777777788988666688999999999998875542210
Q ss_pred -----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----c-cc----
Q 019543 112 -----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----P-LE---- 141 (339)
Q Consensus 112 -----------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~-~~---- 141 (339)
++|+++|++||+++|+|++|+...... . ..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~ 270 (449)
T 3qgu_A 191 YMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGA 270 (449)
T ss_dssp EEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTG
T ss_pred EEecccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCC
Confidence 889999999999999999997643321 1 11
Q ss_pred CCCeEEEeccccccccCCCceEEEEEEcChhHHH--------HHHHHHHhcCCCCChHHHHHHHhchh-----hHHHHHH
Q 019543 142 LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK--------ELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVE 208 (339)
Q Consensus 142 ~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~--------~l~~~~~~~~~~~~~~~a~~~~~~l~-----~~~~r~~ 208 (339)
.+.++++.|+||++|.+|. ..|++++++ ++++ .+...........++...+++...++ .++...+
T Consensus 271 ~~~~i~~~s~sK~~g~~G~-r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 348 (449)
T 3qgu_A 271 DEVAIETCSFSKYAGFTGV-RLGWTVVPK-ALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIK 348 (449)
T ss_dssp GGTEEEEEECSGGGTCTTC-CCEEEECCT-TCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred CCcEEEEecchhhcCCccc-eeEEEecCH-HHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHH
Confidence 2457999999999986554 457888775 4443 33333333333456655444443333 3556677
Q ss_pred HHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCc-ceeecccCCcccc
Q 019543 209 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSL 287 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~-~~i~v~~G~~~s~ 287 (339)
+..++.+++.+.|+++ ++... .| ..+.++++.++ .....++++.|.. .|+.++.|..+.
T Consensus 349 ~~~~~~~~l~~~L~~~-g~~~~-~~----------------~~~~~~~~~~~-~~~~~~~~~~l~~~~gI~v~pg~~f~- 408 (449)
T 3qgu_A 349 FYKENAQILKTTFTEM-GFSVY-GG----------------DDAPYIWVGFP-GKPSWDVFAEILERCNIVTTPGSGYG- 408 (449)
T ss_dssp HHHHHHHHHHHHHHHT-TCCEE-ES----------------SSSSEEEEECT-TSCHHHHHHHHHHHHCEECEEGGGGC-
T ss_pred HHHHHHHHHHHHHHHC-CCeee-CC----------------CCeeEEEEECC-CCCHHHHHHHHHHHCCEEEecchHhC-
Confidence 7788889999999876 44322 12 13567888776 2234566666544 488877664321
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEecc--CCHHHHHHHHHHHHh
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 335 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~--e~~~~li~~l~~al~ 335 (339)
+ ..++.||||+.. ++.++.++.|.++++
T Consensus 409 ---~-----------------~~~~~iRis~~~~~e~i~~~l~~l~~~~~ 438 (449)
T 3qgu_A 409 ---P-----------------AGEGFVRASAFGSRENILEAVRRFKEAYG 438 (449)
T ss_dssp ---G-----------------GGTTEEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred ---C-----------------CCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1 135789999754 333444555555554
No 115
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.78 E-value=3e-17 Score=155.26 Aligned_cols=224 Identities=13% Similarity=0.127 Sum_probs=147.1
Q ss_pred HHH-HHHHHHhHh----C----CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 57 RDA-LESLLAKLD----K----ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 57 ~~~-le~~la~~~----g----~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
..+ |++.+++++ | .++++++++|++|+.+++ .+++|||+|+++.+.|++....+.
T Consensus 65 ~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 144 (390)
T 1d2f_A 65 KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQA 144 (390)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECS
T ss_pred ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCC
Confidence 345 666666654 4 356888888899998654 578899999999988875542221
Q ss_pred ----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C---c-ccC--CC
Q 019543 112 ----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R---P-LEL--GA 144 (339)
Q Consensus 112 ----------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~---~-~~~--~~ 144 (339)
++|+++|++||+++|+|++|+.+... . . ... ..
T Consensus 145 ~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 224 (390)
T 1d2f_A 145 DGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGD 224 (390)
T ss_dssp SSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSS
T ss_pred CccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhh
Confidence 88999999999999999999864331 1 1 112 22
Q ss_pred -eEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH-hcCC-CCChHHHHHHHhchh----hHHHHHHHHHHHHHHH
Q 019543 145 -DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEGS-GLAPFDCWICLRGVK----TMALRVEKQQDNAQKI 217 (339)
Q Consensus 145 -Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~-~~~~-~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l 217 (339)
|+ +.|+||+++.+| ...|+++++++++.+.++.... ..+. ..++...+.+...++ .++...++..++.+++
T Consensus 225 ~d~-~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 302 (390)
T 1d2f_A 225 WAL-LTSGSKSFNIPA-LTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYI 302 (390)
T ss_dssp EEE-EECSHHHHTCGG-GCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred Hhh-ccCccHhhcccC-hhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 77 999999998555 4567888865577777776654 3332 556655444444343 2455566667788888
Q ss_pred HHHHhC-CCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCCH-HHHHHHHccCC-cceeecccCCcccceecccc
Q 019543 218 AEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSL-ALSKHVVETTK-YFSITVSFGSVKSLISMPCF 293 (339)
Q Consensus 218 ~~~L~~-~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~-~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~ 293 (339)
.+.|++ +|++..+ + +.++ ++++.+.+. ....++.+.|. ..|+.++.|..+. +
T Consensus 303 ~~~L~~~~~~~~~~--~----------------~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~----~-- 358 (390)
T 1d2f_A 303 ADKMNAAFPELNWQ--I----------------PQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYG----E-- 358 (390)
T ss_dssp HHHHHHHCSSCCCC--C----------------CSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGC----G--
T ss_pred HHHHHhhCCCCEEe--c----------------CCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccC----C--
Confidence 888887 6665321 1 1233 446776432 13456777776 5788887664321 0
Q ss_pred ccCCCCCHHHHHhCCCCCCeEEEEeccC
Q 019543 294 MSHASIPVEVRQARGLTEDLVRISVGIE 321 (339)
Q Consensus 294 ~~h~~~~~~~~~~~g~~~~~lRisvg~e 321 (339)
..++.+|||++..
T Consensus 359 ---------------~~~~~~Ris~~~~ 371 (390)
T 1d2f_A 359 ---------------EGRGFVRLNAGCP 371 (390)
T ss_dssp ---------------GGTTEEEEECCSC
T ss_pred ---------------CCCCeEEEEecCC
Confidence 0246899999974
No 116
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.78 E-value=1e-17 Score=159.85 Aligned_cols=248 Identities=15% Similarity=0.072 Sum_probs=153.6
Q ss_pred HHHHHHHHHhHh----C----CC-eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH---------------
Q 019543 57 RDALESLLAKLD----K----AD-RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS--------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~----g----~~-~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~--------------- 111 (339)
..+|++.+++++ | .+ ++++++||++|+.+++ .+++|||+|+++++.|++....+.
T Consensus 64 ~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~ 143 (411)
T 2o0r_A 64 SAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDG 143 (411)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEET
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccc
Confidence 456777777764 5 23 6778888899998644 578999999999998876543221
Q ss_pred ---------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C---cc-c----CC
Q 019543 112 ---------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R---PL-E----LG 143 (339)
Q Consensus 112 ---------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~---~~-~----~~ 143 (339)
++|+++|++||+++|+|++|+.+... . .+ . .+
T Consensus 144 ~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 223 (411)
T 2o0r_A 144 RGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAE 223 (411)
T ss_dssp TEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGG
T ss_pred cCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCC
Confidence 88999999999999999999765431 1 11 1 35
Q ss_pred CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh----hHHHHHHHHHHHHHHHHH
Q 019543 144 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAE 219 (339)
Q Consensus 144 ~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~----~~~~r~~~~~~~a~~l~~ 219 (339)
.|++++|+||.++.+| ...|+++++ +++++.+.......+...++...+.+...|+ .++...++..++.+++.+
T Consensus 224 ~~i~~~s~sK~~~~~G-~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 301 (411)
T 2o0r_A 224 RTITISSAAKMFNCTG-WKIGWACGP-AELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAA 301 (411)
T ss_dssp GEEEEEEHHHHTTCTT-TCEEEEECC-HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeechhhcCCcc-ceEEEEeeC-HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 6999999999998665 456888876 5788887766554443444433333333332 244556666777888888
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccCC-cceeecccCCcccceeccccccC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSH 296 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~~h 296 (339)
.|+++ ++.. ..| ..+.++++.+.+. ....++.+.|. ..|+.+..|..+... .....|
T Consensus 302 ~L~~~-g~~~-~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~--~~~~~~ 361 (411)
T 2o0r_A 302 GLTEI-GFAV-HDS----------------YGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDP--AAGQAS 361 (411)
T ss_dssp HHHHH-TCEE-CCC----------------CBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCC--C-----
T ss_pred HHHHc-CCEe-cCC----------------CeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCC--cccccc
Confidence 88765 4432 111 1244777877431 12456777664 568888766432110 000011
Q ss_pred CCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 297 ASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 297 ~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
... +..++.+|||++. +++.++.+.++|++
T Consensus 362 ~~~--------~~~~~~iRis~~~--~~e~i~~~~~~l~~ 391 (411)
T 2o0r_A 362 QQA--------DVWNHLVRFTFCK--RDDTLDEAIRRLSV 391 (411)
T ss_dssp -----------CCGGGCEEEECCS--CHHHHHHHHHHHGG
T ss_pred ccc--------cCCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 100 0124679999985 34445555555543
No 117
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.78 E-value=5.9e-18 Score=160.74 Aligned_cols=240 Identities=16% Similarity=0.168 Sum_probs=159.2
Q ss_pred cCCCCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcC-------CC-CEEEEcCCCccchHH------------
Q 019543 50 TRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLG-------TG-EEIVAGDDLYGGTDR------------ 108 (339)
Q Consensus 50 ~r~~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~-------~G-D~Vi~~~~~y~~~~~------------ 108 (339)
.+..++..+++++++++++|.+++++++||++|+.+++. +.. +| |+|++.++.|++...
T Consensus 76 ~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~ 155 (406)
T 4adb_A 76 NGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYS 155 (406)
T ss_dssp TTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGT
T ss_pred CCcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCcccc
Confidence 344578899999999999999999999999999986544 433 65 999999998876521
Q ss_pred -------------------HHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCc
Q 019543 109 -------------------LLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRP 139 (339)
Q Consensus 109 -------------------~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~ 139 (339)
.++ ++|.++|++||++||+|++|+ .+..+.+
T Consensus 156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~ 235 (406)
T 4adb_A 156 QDFAPLPADIRHAAYNDINSASALIDDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGEL 235 (406)
T ss_dssp GGGCSCCSSEEEECTTCHHHHHTTCSTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred ccCCCCCCCceEeCCCcHHHHHHHhcCCeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh
Confidence 011 899999999999999999996 3222222
Q ss_pred -----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH--HHHHHHHHH
Q 019543 140 -----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQD 212 (339)
Q Consensus 140 -----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~--~~r~~~~~~ 212 (339)
.....|++ ||||+++ +| ..+|++++++ ++++.+.......+...++..++.+...++.+ +...++.++
T Consensus 236 ~~~~~~~~~~d~~--t~sK~~~-~G-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 310 (406)
T 4adb_A 236 YAYMHYGVTPDLL--TTAKALG-GG-FPVGALLATE-ECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQ 310 (406)
T ss_dssp SHHHHHTCCCSEE--EECGGGG-TT-SCCEEEEECH-HHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHHHHHH
T ss_pred HHHHhcCCCCCEE--Eechhhc-CC-CCeEEEEEcH-HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 12345766 6799999 34 5677888764 66665554332334566777766666666544 555666777
Q ss_pred HHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHH--HHHHHHccCCcceeecccCCcccceec
Q 019543 213 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA--LSKHVVETTKYFSITVSFGSVKSLISM 290 (339)
Q Consensus 213 ~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~--~~~~~~~~L~~~~i~v~~G~~~s~~~~ 290 (339)
+.+++.+.|+.... .++.... .++.+.+++|.+.+.. ...++++.|...|+.++.+
T Consensus 311 ~~~~l~~~l~~~~~----~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~-------- 368 (406)
T 4adb_A 311 RHDWFVERLNTINH----RYGLFSE----------VRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIA-------- 368 (406)
T ss_dssp HHHHHHHHHHHHHH----HHCCEEE----------EEEETTEEEEEECTTTTTCHHHHHHHHHHTTEECEES--------
T ss_pred HHHHHHHHHHHHHH----hCCCceE----------EEEEEEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeec--------
Confidence 78888887775421 0110000 1235678899885432 3567777777777766532
Q ss_pred cccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 291 PCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 291 p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.++.+|++++...+++.++.+.++|+
T Consensus 369 -------------------~~~~iRi~~~~~~~~e~i~~~~~~l~ 394 (406)
T 4adb_A 369 -------------------GGNVVRFAPALNVSEEEVTTGLDRFA 394 (406)
T ss_dssp -------------------STTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred -------------------CCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 23679998777665555555554443
No 118
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.78 E-value=1e-17 Score=158.36 Aligned_cols=241 Identities=14% Similarity=0.136 Sum_probs=154.0
Q ss_pred CchHHHHHHHHHhHhCCC---eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchH--HHHH----------------
Q 019543 54 NPTRDALESLLAKLDKAD---RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTD--RLLS---------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~---~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~--~~~~---------------- 111 (339)
.+..+++++.+++++|.+ .+++++||++|+.+++ .+++|||+|+++++.|++.. .+.+
T Consensus 51 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 130 (393)
T 2huf_A 51 LKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKVGQS 130 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCCCC
Confidence 356889999999999975 3556788899998644 57899999999998887632 1111
Q ss_pred ---------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEecccccccc
Q 019543 112 ---------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 157 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g 157 (339)
++|.++|++||+++|+|++|+.+... +....+.|++++|+||+++|
T Consensus 131 ~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g 210 (393)
T 2huf_A 131 LSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGA 210 (393)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTCC
T ss_pred CCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCccccc
Confidence 89999999999999999999876432 22234689999999999875
Q ss_pred CCCceEEEEEEcChhHHHHHHHHH----H-h---------cC---------CCCChHHHHHHHhchhh-----HHHHHHH
Q 019543 158 HSDVMAGVLAVKGERLAKELYFLQ----N-A---------EG---------SGLAPFDCWICLRGVKT-----MALRVEK 209 (339)
Q Consensus 158 ~~~~~gG~v~~~~~~l~~~l~~~~----~-~---------~~---------~~~~~~~a~~~~~~l~~-----~~~r~~~ 209 (339)
+.+. |+++++ +++.+.++... . . ++ ...+....+.+...++. ++...++
T Consensus 211 ~~G~--G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 287 (393)
T 2huf_A 211 PPGI--TPVSFS-HRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIAR 287 (393)
T ss_dssp CSSC--EEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred CCCe--EEEEEC-HHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 5433 777776 46777665320 0 0 11 12233322222222222 4556677
Q ss_pred HHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCc-ceeecccCCcccce
Q 019543 210 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLI 288 (339)
Q Consensus 210 ~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~-~~i~v~~G~~~s~~ 288 (339)
..++++++.+.|+++ +++. ..|. . ...+.+++|.+.......++.+.|.. .|+.++.|..
T Consensus 288 ~~~~~~~l~~~L~~~-g~~~-~~~~----~---------~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~---- 348 (393)
T 2huf_A 288 HEDCAKRLYRGLQDA-GFEL-YADP----K---------DRLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLG---- 348 (393)
T ss_dssp HHHHHHHHHHHHHHT-TCCB-SSCG----G---------GBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCG----
T ss_pred HHHHHHHHHHHHHHc-CCee-ccCc----c---------ccCCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCcc----
Confidence 778889999999876 4431 1110 0 00234888877422234567777754 5888776542
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEe-ccC----CHHHHHHHHHHHHh
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISV-GIE----DVNDLISDLDKALR 335 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisv-g~e----~~~~li~~l~~al~ 335 (339)
+ ..++.+|||+ +.. +.+.+++.|.++++
T Consensus 349 --~-----------------~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~ 381 (393)
T 2huf_A 349 --P-----------------TAGQVFRIGLMGQNATTERVDRVLQVFQEAVA 381 (393)
T ss_dssp --G-----------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred --c-----------------ccCCEEEEEcccCcCCHHHHHHHHHHHHHHHH
Confidence 1 0347899999 643 24445555555554
No 119
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.77 E-value=3.6e-17 Score=160.47 Aligned_cols=242 Identities=14% Similarity=0.099 Sum_probs=149.9
Q ss_pred hHHHHHHHHHhHhC----CCeEEEcCcHHHHHHHHHH-hc-CCCCEEEEcCCCccchHHHHH------------------
Q 019543 56 TRDALESLLAKLDK----ADRALCFTSGMAALAAVTH-LL-GTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 56 ~~~~le~~la~~~g----~~~~l~~~sG~~A~~~il~-ll-~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
.++++.+.+.+..| .++++++++|++|+..++. ++ ++||+|+++.+.|......+.
T Consensus 139 lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 218 (500)
T 3tcm_A 139 LRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWG 218 (500)
T ss_dssp HHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSB
T ss_pred HHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCC
Confidence 34444444444333 4578888888999986554 66 799999999998876543322
Q ss_pred -----------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--cc--------
Q 019543 112 -----------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR--PL-------- 140 (339)
Q Consensus 112 -----------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~--~~-------- 140 (339)
++|+++|++||+++|+|++|+...+.. +.
T Consensus 219 ~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~ 298 (500)
T 3tcm_A 219 LETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVR 298 (500)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHH
Confidence 788889999999999999998755421 11
Q ss_pred cC-----CC-eEEEeccccccccCCCceEEEEEEc--ChhHHHHHHHHHHhcCCCCChHHHHHH---Hh-----------
Q 019543 141 EL-----GA-DIVMHSATKFIAGHSDVMAGVLAVK--GERLAKELYFLQNAEGSGLAPFDCWIC---LR----------- 198 (339)
Q Consensus 141 ~~-----~~-Di~~~S~sK~l~g~~~~~gG~v~~~--~~~l~~~l~~~~~~~~~~~~~~~a~~~---~~----------- 198 (339)
.. .. .++++|+||.+.|..+..+|++++. ++++++.+...+.. ....+....+++ +.
T Consensus 299 ~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 377 (500)
T 3tcm_A 299 SLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASV-NLCSNITGQILASLVMNPPKASDESYAS 377 (500)
T ss_dssp HTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHT-TCCCCHHHHHHHHHHHSCCCSSSTHHHH
T ss_pred HhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhc-ccCCCHHHHHHHHHHhcCccccchhHHH
Confidence 01 11 3778899999943333567788761 34688888776643 333344333222 22
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEE-eeCCHHH------------H
Q 019543 199 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LTGSLAL------------S 265 (339)
Q Consensus 199 ~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~-~~~~~~~------------~ 265 (339)
..+..+..+++++++++++.+.|+++++++.+ .| .++++.+ .+..+.. .
T Consensus 378 ~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~~-----------------~g~~~~~~~~~lp~~~~~~~~~~g~~~~ 439 (500)
T 3tcm_A 378 YKAEKDGILASLARRAKALEHAFNKLEGITCN-EA-----------------EGAMYVFPQICLPQKAIEAAKAANKAPD 439 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSTTEECC-CC-----------------CBTTEECCEECCCHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEe-cC-----------------CeEEEEeeeecCchhhHHHHHhcCCCcH
Confidence 12334556677788899999999998876532 11 3455544 2321111 1
Q ss_pred HHH-HccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEecc--CCHHHHHHHHHHHHhc
Q 019543 266 KHV-VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 336 (339)
Q Consensus 266 ~~~-~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~--e~~~~li~~l~~al~~ 336 (339)
..+ .+.|++.||.+..|..+.. + ..++.+|+|++. ++.++.++.|.+++++
T Consensus 440 ~~~~~~ll~~~gI~v~pg~~f~~---~-----------------~g~~~iRis~~~~~e~i~~~i~~l~~~~~~ 493 (500)
T 3tcm_A 440 AFYALRLLESTGIVVVPGSGFGQ---V-----------------PGTWHFRCTILPQEDKIPAVISRFTVFHEA 493 (500)
T ss_dssp HHHHHHHHHHHCEECEESTTTCC---C-----------------TTCCBEEEESCSCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEEeCcccCC---C-----------------CCCCEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 122 2445667888887754321 0 134689999983 3455667777766653
No 120
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.77 E-value=2.6e-17 Score=155.99 Aligned_cols=236 Identities=14% Similarity=0.119 Sum_probs=147.6
Q ss_pred hHHHHHHHHHhHhC----CCeEEEcCcHHHHHHHHH-HhcCCC-CEEEEcCCCccchHHHHH------------------
Q 019543 56 TRDALESLLAKLDK----ADRALCFTSGMAALAAVT-HLLGTG-EEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 56 ~~~~le~~la~~~g----~~~~l~~~sG~~A~~~il-~ll~~G-D~Vi~~~~~y~~~~~~~~------------------ 111 (339)
.++++.+.+++.+| .++++++++|++|+..++ .+++|| |+|+++++.|.+....+.
T Consensus 81 lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 160 (398)
T 3ele_A 81 TRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQI 160 (398)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSC
T ss_pred HHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcC
Confidence 34444444444444 357888888899998654 578999 999999999987664433
Q ss_pred ----------------------------------HHHHHHHHH------cCCEEEEeCCcCCCCCcC-cc-----cCCCe
Q 019543 112 ----------------------------------RKIAEMAHA------HGALLLVDNSIMSPVLSR-PL-----ELGAD 145 (339)
Q Consensus 112 ----------------------------------~~I~~la~~------~g~~livD~a~a~g~~~~-~~-----~~~~D 145 (339)
++|+++|++ ||+++|+|++|+...... .. ..+.+
T Consensus 161 d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 240 (398)
T 3ele_A 161 DFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNT 240 (398)
T ss_dssp CHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSE
T ss_pred CHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCe
Confidence 778899999 999999999997643311 11 12457
Q ss_pred EEEeccccccccCCCceEEEEEEcCh-----hHHHHHHHHHHhcC-CCCChHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q 019543 146 IVMHSATKFIAGHSDVMAGVLAVKGE-----RLAKELYFLQNAEG-SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 219 (339)
Q Consensus 146 i~~~S~sK~l~g~~~~~gG~v~~~~~-----~l~~~l~~~~~~~~-~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~ 219 (339)
+++.|+||+++.+|. ..|+++++++ .+.+.+.......+ ...++...+.+...++... ..++..++.+++.+
T Consensus 241 i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~ 318 (398)
T 3ele_A 241 LVCYSYSKSLSLPGE-RIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-DINAYKENRDLLYE 318 (398)
T ss_dssp EEEEESTTTSSCTTT-CCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-CHHHHHHHHHHHHH
T ss_pred EEEEehhhcCCCccc-eeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-HHHHHHHHHHHHHH
Confidence 999999999986664 4578877763 12333333333333 3445555555555554322 34556677778888
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 299 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~ 299 (339)
.|+++ ++. +..|. .+..+++.+.+. ...++.+.|+..|+.++.|..+.
T Consensus 319 ~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~------------- 366 (398)
T 3ele_A 319 GLTRI-GYH-CFKPD----------------GAFYMFVKALED-DSNAFCEKAKEEDVLIVAADGFG------------- 366 (398)
T ss_dssp HHHHH-TCC-EECCS----------------BSSEEEEECSSS-CHHHHHHHHHTTTEECEESGGGT-------------
T ss_pred HHHHc-CCe-ecCCC----------------eeEEEEEEcCCC-CHHHHHHHHHHCCEEEeCccccC-------------
Confidence 88765 333 22221 233477777532 34567777777888887664321
Q ss_pred CHHHHHhCCCCCCeEEEEecc--CCHHHHHHHHHHHHh
Q 019543 300 PVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 335 (339)
Q Consensus 300 ~~~~~~~~g~~~~~lRisvg~--e~~~~li~~l~~al~ 335 (339)
.++.+|||++. |+.++.++.|.++++
T Consensus 367 ----------~~~~iRis~~~~~e~i~~~l~~l~~~l~ 394 (398)
T 3ele_A 367 ----------CPGWVRISYCVDREMIKHSMPAFEKIYK 394 (398)
T ss_dssp ----------CTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred ----------CCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 13689999984 122334455555554
No 121
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.77 E-value=3.3e-17 Score=157.08 Aligned_cols=240 Identities=18% Similarity=0.106 Sum_probs=153.2
Q ss_pred HHHHHHHHHhHh----C----CC-eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHH-----------------
Q 019543 57 RDALESLLAKLD----K----AD-RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRL----------------- 109 (339)
Q Consensus 57 ~~~le~~la~~~----g----~~-~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~----------------- 109 (339)
..+|++.+++++ | .+ +++++++|++|+.+++ .++++||+|+++.+.|++....
T Consensus 79 ~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 158 (429)
T 1yiz_A 79 HPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNK 158 (429)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCccc
Confidence 456777777664 5 34 6778888899998654 4789999999998877643210
Q ss_pred ----------------HH----------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cC---c--
Q 019543 110 ----------------LS----------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SR---P-- 139 (339)
Q Consensus 110 ----------------~~----------------------------~~I~~la~~~g~~livD~a~a~g~~-~~---~-- 139 (339)
+. ++|+++|++||+++|+|++|+...+ +. +
T Consensus 159 ~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~ 238 (429)
T 1yiz_A 159 TGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRIC 238 (429)
T ss_dssp SSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGG
T ss_pred ccccccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChh
Confidence 11 8899999999999999999975332 11 1
Q ss_pred -c--cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh-----------HHH
Q 019543 140 -L--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-----------MAL 205 (339)
Q Consensus 140 -~--~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~-----------~~~ 205 (339)
+ ..+.|+++.|+||.++++| ...|+++++ +++++.+...........++...+.+...|+. +..
T Consensus 239 ~~~~~~~~~~~~~s~sK~~~~~G-~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 316 (429)
T 1yiz_A 239 TLPGMWERTITIGSAGKTFSLTG-WKIGWAYGP-EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNS 316 (429)
T ss_dssp GSTTTGGGEEEEEEHHHHHTCGG-GCCEEEESC-HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHH
T ss_pred hccCCcCceEEEecchhccCCCC-cceEEEEeC-HHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHH
Confidence 1 2357899999999998665 445788876 46888777665544555566544443333333 445
Q ss_pred HHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH------------HHHHHHHccCC
Q 019543 206 RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL------------ALSKHVVETTK 273 (339)
Q Consensus 206 r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~------------~~~~~~~~~L~ 273 (339)
..++..++.+++.+.|+++ ++.. ..|. .+.++++.+.+. ....++++.|.
T Consensus 317 ~~~~~~~~~~~l~~~L~~~-g~~~-~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 378 (429)
T 1yiz_A 317 ISGELMAKRDYMASFLAEV-GMNP-TVPQ----------------GGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMT 378 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TCEE-EECS----------------BSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC-CCcc-cCCC----------------cceEEEEEcccccccccccccccCCCHHHHHHHHH
Confidence 5566667788888888776 4432 2221 345788877532 23456777664
Q ss_pred -cceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 274 -YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 274 -~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
..|+.++.|..+.. .+ + .+..++.+|||++. +++.++.+.+.|
T Consensus 379 ~~~gv~v~~g~~f~~--~~----~----------~~~~~~~iRis~~~--~~e~i~~~l~~l 422 (429)
T 1yiz_A 379 KSVGLQGIPPSAFYS--EP----N----------KHLGEDFVRYCFFK--KDENLQKAAEIL 422 (429)
T ss_dssp HHTSEECBCGGGGSC--GG----G----------GGGTTTEEEEECCS--CHHHHHHHHHHH
T ss_pred HhCCEEEeCchHhCC--Cc----c----------cCCCCCeEEEEecC--CHHHHHHHHHHH
Confidence 67888876643211 00 0 00125789999985 344444444444
No 122
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.77 E-value=2.2e-17 Score=157.73 Aligned_cols=244 Identities=14% Similarity=0.102 Sum_probs=154.1
Q ss_pred HHHHHHHHHhHh----CC-----CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHH-----------------
Q 019543 57 RDALESLLAKLD----KA-----DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRL----------------- 109 (339)
Q Consensus 57 ~~~le~~la~~~----g~-----~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~----------------- 109 (339)
..++++.+++++ |. +++++++||++|+..++ .+++|||+|+++.+.|.+....
T Consensus 69 ~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 148 (422)
T 3fvs_A 69 YPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGP 148 (422)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCC
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEeccccc
Confidence 345555555554 32 46888888899998654 5789999999998877654311
Q ss_pred ------------------HH----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----c
Q 019543 110 ------------------LS----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----P 139 (339)
Q Consensus 110 ------------------~~----------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~ 139 (339)
+. ++|+++|++||+++|+|++|+...+.. .
T Consensus 149 ~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 228 (422)
T 3fvs_A 149 IQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHIS 228 (422)
T ss_dssp CCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCC
T ss_pred ccccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCC
Confidence 11 889999999999999999997543211 1
Q ss_pred c-c----CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh-----------hH
Q 019543 140 L-E----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----------TM 203 (339)
Q Consensus 140 ~-~----~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~-----------~~ 203 (339)
+ . .+.++++.|+||.++.+| ...|++++++ ++++.+...........++...+.+...++ .+
T Consensus 229 ~~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 306 (422)
T 3fvs_A 229 IASLPGMWERTLTIGSAGKTFSATG-WKVGWVLGPD-HIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYF 306 (422)
T ss_dssp GGGSTTTGGGEEEEEEHHHHHTCGG-GCCEEEECCH-HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHH
T ss_pred hhhcccccCcEEEEecchhccCCcc-ceEEEEEeCH-HHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHH
Confidence 1 1 234699999999998655 3457887764 677877766655555566665554444443 24
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHH-------------HHHHHc
Q 019543 204 ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLAL-------------SKHVVE 270 (339)
Q Consensus 204 ~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~-------------~~~~~~ 270 (339)
+...++..++.+++.+.|+++ ++. +..|. .+..+++.+..... ..++++
T Consensus 307 ~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (422)
T 3fvs_A 307 VQFPQAMQRCRDHMIRSLQSV-GLK-PIIPQ----------------GSYFLITDISDFKRKMPDLPGAVDEPYDRRFVK 368 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-TCE-EEBCS----------------BSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCe-ecCCC----------------eeeEEEEechhhcccccccccccccccHHHHHH
Confidence 566777788889999999887 553 23331 34566666532110 335565
Q ss_pred c-CCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEecc--CCHHHHHHHHHHHHhc
Q 019543 271 T-TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 336 (339)
Q Consensus 271 ~-L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~--e~~~~li~~l~~al~~ 336 (339)
. +++.|+.++.|..+.. .+. . ...++.+|||++. ++.++.++.|.+++++
T Consensus 369 ~ll~~~gv~v~~g~~f~~--~~~------------~--~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 369 WMIKNKGLVAIPVSIFYS--VPH------------Q--KHFDHYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp HHHHHHCEECEEGGGGSC--HHH------------H--TTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCEEEeCcHHhcC--CcC------------C--CCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 5 3457888877653211 000 0 0145889999987 2223445555555543
No 123
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.77 E-value=8.2e-18 Score=158.53 Aligned_cols=243 Identities=16% Similarity=0.191 Sum_probs=157.7
Q ss_pred CchHHHHHHHHHhHhCCC---eEEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccch--HHHHH----------------
Q 019543 54 NPTRDALESLLAKLDKAD---RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGT--DRLLS---------------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~---~~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~--~~~~~---------------- 111 (339)
.+..+++++++++++|.+ .+++++||++|+.+ +..+++|||+|+++.+.|.+. .....
T Consensus 55 ~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 134 (393)
T 3kgw_A 55 LQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEH 134 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCC
Confidence 356789999999999865 36677888999975 445889999999988776432 11111
Q ss_pred ---------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEecccccccc
Q 019543 112 ---------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 157 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g 157 (339)
++|.++|++||+++|+|++|+.|... .....+.|+++.|+||+++|
T Consensus 135 ~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~ 214 (393)
T 3kgw_A 135 YTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNA 214 (393)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCC
T ss_pred CCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccccC
Confidence 89999999999999999999866432 22345789999999999875
Q ss_pred CCCceEEEEEEcChhHHHHHHHHH--------------Hhc---------CCCCChHHHHHHHhchh---h--HHHHHHH
Q 019543 158 HSDVMAGVLAVKGERLAKELYFLQ--------------NAE---------GSGLAPFDCWICLRGVK---T--MALRVEK 209 (339)
Q Consensus 158 ~~~~~gG~v~~~~~~l~~~l~~~~--------------~~~---------~~~~~~~~a~~~~~~l~---~--~~~r~~~ 209 (339)
+.+ .|++++++ ++++.+.... ..+ ....+....+.+...++ . ++...++
T Consensus 215 ~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 291 (393)
T 3kgw_A 215 PPG--ISLISFND-KAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRR 291 (393)
T ss_dssp CSS--CEEEEECH-HHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred CCc--eeEEEECH-HHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 543 47777764 6666664311 011 12334433333323333 2 4566777
Q ss_pred HHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcc-eeecccCCcccce
Q 019543 210 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLI 288 (339)
Q Consensus 210 ~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~-~i~v~~G~~~s~~ 288 (339)
..++++++.+.|+++ +++. ..|. +. ...+.+++|.+.+.....++.+.|... |+.++.|..
T Consensus 292 ~~~~~~~l~~~L~~~-g~~~-~~~~----~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~---- 353 (393)
T 3kgw_A 292 HREATAHLHKHLQEM-GLKF-FVKD----PE--------IRLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLG---- 353 (393)
T ss_dssp HHHHHHHHHHHHHHT-TCCB-SSSS----GG--------GBCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCG----
T ss_pred HHHHHHHHHHHHHHc-CCee-ccCC----hh--------hcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcc----
Confidence 788899999999887 4432 1111 00 112456677775333456777777665 888876531
Q ss_pred eccccccCCCCCHHHHHhCCCCCCeEEEEe-cc----CCHHHHHHHHHHHHhc
Q 019543 289 SMPCFMSHASIPVEVRQARGLTEDLVRISV-GI----EDVNDLISDLDKALRT 336 (339)
Q Consensus 289 ~~p~~~~h~~~~~~~~~~~g~~~~~lRisv-g~----e~~~~li~~l~~al~~ 336 (339)
+ ..++.+||++ +. ++.+.+++.|.+++++
T Consensus 354 --~-----------------~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 387 (393)
T 3kgw_A 354 --P-----------------TEERVLRIGLLGYNATTENVDRVAEALREALQH 387 (393)
T ss_dssp --G-----------------GTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred --c-----------------CCCCEEEEEecccCCCHHHHHHHHHHHHHHHHh
Confidence 1 1347899998 64 4455666666666654
No 124
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.77 E-value=1.2e-17 Score=157.85 Aligned_cols=157 Identities=23% Similarity=0.290 Sum_probs=116.6
Q ss_pred hHHHHHHHHHhHhCC---CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHH---H-------------------
Q 019543 56 TRDALESLLAKLDKA---DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRL---L------------------- 110 (339)
Q Consensus 56 ~~~~le~~la~~~g~---~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~---~------------------- 110 (339)
..+++++.+++++|+ +++++++||++|+..++..+ |||+|+++++.|++.... +
T Consensus 59 ~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~-~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v~d~~~l~~~ 137 (374)
T 2aeu_A 59 FAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL-KPKKVIHYLPELPGHPSIERSCKIVNAKYFESDKVGEILNK 137 (374)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH-CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEESCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC-CCCEEEEecCCCCccHHHHHHHHHcCcEEEEeCCHHHHHhc
Confidence 346777777888898 78999999999998655544 999999999977653210 0
Q ss_pred -------H----------------HHHHHHHHHcCCEEEEeCCcCCCCC---cC--cccCCCeEEEeccccccccCCCce
Q 019543 111 -------S----------------RKIAEMAHAHGALLLVDNSIMSPVL---SR--PLELGADIVMHSATKFIAGHSDVM 162 (339)
Q Consensus 111 -------~----------------~~I~~la~~~g~~livD~a~a~g~~---~~--~~~~~~Di~~~S~sK~l~g~~~~~ 162 (339)
- ++|.++|++||+++|+|++|+.+.. .. +...+.|++++|+||+++|+ .
T Consensus 138 ~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~---~ 214 (374)
T 2aeu_A 138 IDKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGP---R 214 (374)
T ss_dssp CCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSC---S
T ss_pred CCCccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCc---c
Confidence 0 8999999999999999999976531 11 34457799999999998853 5
Q ss_pred EEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHHH-HHHHHHHHHHHH
Q 019543 163 AGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL-RVEKQQDNAQKI 217 (339)
Q Consensus 163 gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~~-r~~~~~~~a~~l 217 (339)
+|++++++ ++++.++.....++..+++..++++..+++.+.. +++++.++++.+
T Consensus 215 ~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 269 (374)
T 2aeu_A 215 GGLLAGKK-ELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNF 269 (374)
T ss_dssp CEEEEEEH-HHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
T ss_pred eEEEEECH-HHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 78888875 7888888777667777788877777666665433 555555555555
No 125
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.77 E-value=1.7e-17 Score=157.79 Aligned_cols=243 Identities=17% Similarity=0.083 Sum_probs=157.6
Q ss_pred HHHHHHHHHhHhC--------C-CeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHH----------------
Q 019543 57 RDALESLLAKLDK--------A-DRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLL---------------- 110 (339)
Q Consensus 57 ~~~le~~la~~~g--------~-~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~---------------- 110 (339)
..++++.++++++ . ++++++++|++|+..++ .++++||+|+++.+.|.+....+
T Consensus 63 ~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 142 (410)
T 3e2y_A 63 HPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKP 142 (410)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccc
Confidence 5677777777765 2 57888888899998644 57899999999998876543211
Q ss_pred ------------------H----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc
Q 019543 111 ------------------S----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL 140 (339)
Q Consensus 111 ------------------~----------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~ 140 (339)
. ++|+++|++||+++|+|++|+...... .+
T Consensus 143 ~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 222 (410)
T 3e2y_A 143 TDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKI 222 (410)
T ss_dssp CCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCG
T ss_pred cccccccccCCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCH
Confidence 1 889999999999999999997543211 11
Q ss_pred -c----CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh-----------hHH
Q 019543 141 -E----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----------TMA 204 (339)
Q Consensus 141 -~----~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~-----------~~~ 204 (339)
. .+.++++.|+||.++.+| ...|++++++ ++++.++......+...++...+.+...++ .+.
T Consensus 223 ~~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 300 (410)
T 3e2y_A 223 ATLPGMWERTITIGSAGKTFSVTG-WKLGWSIGPA-HLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFN 300 (410)
T ss_dssp GGSTTCGGGEEEEEEHHHHSSCGG-GCCEEEECCH-HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHH
T ss_pred HHcCCccCeEEEEecchhhcCCCC-ceEEEEEECH-HHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHH
Confidence 1 133599999999998665 4567887764 677887776655555666665554444433 245
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-----------HHHHHHHccC-
Q 019543 205 LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----------ALSKHVVETT- 272 (339)
Q Consensus 205 ~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-----------~~~~~~~~~L- 272 (339)
...++..++.+++.+.|+++ ++. +..|. .+.++++.+... ....++++.+
T Consensus 301 ~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 362 (410)
T 3e2y_A 301 SLPKELEVKRDRMVRLLNSV-GLK-PIVPD----------------GGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMT 362 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-TCE-EEBCS----------------BSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCe-ecCCC----------------ccEEEEEEchhhhcccccccccccCHHHHHHHHH
Confidence 66677778889999999887 553 23331 344555554211 0123455543
Q ss_pred CcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 273 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 273 ~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
++.|+.++.|..+.. .+ +.+ ..++.+|||++. +++.++.+.++|+++
T Consensus 363 ~~~gv~v~~g~~f~~--~~--------~~~------~~~~~iRis~~~--~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 363 KHKKLTAIPVSAFCD--SK--------SKP------HFEKLVRFCFIK--KDSTLDAAEEIFRAW 409 (410)
T ss_dssp HHHSEECEEGGGGSC--TT--------THH------HHTTEEEEECCC--CHHHHHHHHHHHHTC
T ss_pred HHcCEEEeCchhhCC--CC--------CCC------CCCCEEEEEEcC--CHHHHHHHHHHHHhc
Confidence 567888876653221 00 000 024789999987 556666676766653
No 126
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.77 E-value=1.2e-17 Score=158.52 Aligned_cols=247 Identities=19% Similarity=0.195 Sum_probs=157.4
Q ss_pred CCchHHHHH----HHHHhHhCCCeEEE-cCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHH---------H--------
Q 019543 53 GNPTRDALE----SLLAKLDKADRALC-FTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDR---------L-------- 109 (339)
Q Consensus 53 ~~~~~~~le----~~la~~~g~~~~l~-~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~---------~-------- 109 (339)
+++...++| +++++++|.+...+ ++||++|+.++ ..++++||+|+++++.|+.... .
T Consensus 63 ~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 142 (405)
T 2vi8_A 63 GCEYVDIVEELARERAKQLFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYG 142 (405)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEEC
T ss_pred cchHHHHHHHHHHHHHHHHhCCCceEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEecc
Confidence 345666776 59999999887655 68999999854 4578999999999876543210 0
Q ss_pred ----------------HH--------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---ccc-CCCeEEEe
Q 019543 110 ----------------LS--------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---PLE-LGADIVMH 149 (339)
Q Consensus 110 ----------------~~--------------------~~I~~la~~~g~~livD~a~a~g~~~~---~~~-~~~Di~~~ 149 (339)
+. ++|.++|++||+++|+|++|+.|.... ... ...|++++
T Consensus 143 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~ 222 (405)
T 2vi8_A 143 VDPETHVIDYDDVREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTT 222 (405)
T ss_dssp BCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEE
T ss_pred cccccCCcCHHHHHHHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEE
Confidence 00 999999999999999999998543211 111 15799999
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHHHHHHhcC-CCCChHHHHHHHhch-----hhHHHHHHHHHHHHHHHHHHHhC
Q 019543 150 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPFDCWICLRGV-----KTMALRVEKQQDNAQKIAEFLAS 223 (339)
Q Consensus 150 S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~-~~~~~~~a~~~~~~l-----~~~~~r~~~~~~~a~~l~~~L~~ 223 (339)
|+||+++|+. ||+++++ +++.+.++.....+. ...++...+.+...+ +.++...++..++.+++.+.|++
T Consensus 223 s~sK~~~g~~---gG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 298 (405)
T 2vi8_A 223 TTHKTLRGPR---GGMILCQ-EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQN 298 (405)
T ss_dssp ESSSTTCCCS---CEEEEEC-HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccccCCCCC---CeEEEEc-HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998543 4888887 467777766543222 222343322222222 23456677778889999999987
Q ss_pred CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHH
Q 019543 224 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 302 (339)
Q Consensus 224 ~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~ 302 (339)
+ ++. +..| .+.+.++++.+.+. .....+.+.|...|+.++.|.. |. |.. +.
T Consensus 299 ~-g~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~------~~---~~~-~~- 350 (405)
T 2vi8_A 299 E-GFT-LVSG---------------GTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTI------PY---DPE-SP- 350 (405)
T ss_dssp T-TCE-EGGG---------------SCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECC------TT---CSS-CT-
T ss_pred C-CCe-EecC---------------CCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcC------cc---ccC-CC-
Confidence 7 543 2222 12467888877421 1245667777777888776541 10 000 00
Q ss_pred HHHhCCCCCCeEEEEecc--------CCHHHHHHHHHHHHhcC
Q 019543 303 VRQARGLTEDLVRISVGI--------EDVNDLISDLDKALRTG 337 (339)
Q Consensus 303 ~~~~~g~~~~~lRisvg~--------e~~~~li~~l~~al~~~ 337 (339)
..++.+|+|++. ++.+.+++.|.+++++.
T Consensus 351 ------~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 351 ------FVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp ------TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred ------CCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence 123579999995 44555666666666543
No 127
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.77 E-value=2.8e-17 Score=154.56 Aligned_cols=201 Identities=11% Similarity=0.042 Sum_probs=136.9
Q ss_pred HHHHHHHHHhH------hCC--CeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH----------------
Q 019543 57 RDALESLLAKL------DKA--DRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS---------------- 111 (339)
Q Consensus 57 ~~~le~~la~~------~g~--~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~---------------- 111 (339)
..++++.++++ .+. +.++++++|++|+.++ ..++++||+|+++++.|++....+.
T Consensus 71 ~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~ 150 (369)
T 3cq5_A 71 AVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFR 150 (369)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSS
T ss_pred HHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCC
Confidence 46899999888 443 3566666668888754 4578999999999998876643322
Q ss_pred ---------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-Cccc----CC-CeEEEeccc
Q 019543 112 ---------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLE----LG-ADIVMHSAT 152 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~----~~-~Di~~~S~s 152 (339)
++|.++|+.+++++|+|++|+.+... .... .+ .+++++|+|
T Consensus 151 ~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 230 (369)
T 3cq5_A 151 IDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMS 230 (369)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESS
T ss_pred CCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEech
Confidence 89999999999999999999765431 2221 24 569999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh---hHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 153 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 153 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~---~~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
|+++.+| ...|++++++ ++.+.++.... ....++...+.+...++ .++.+.++..++.+++.+.|++. +++.
T Consensus 231 K~~~~~G-~r~G~~~~~~-~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 305 (369)
T 3cq5_A 231 KAFDFAG-GRLGYFVANP-AFIDAVMLVRL--PYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL-GYAV 305 (369)
T ss_dssp STTSCGG-GCCEEEEECT-HHHHHHHTTSC--TTCSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH-TCEE
T ss_pred HhcCCcc-cceEEEEeCH-HHHHHHHHcCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEE
Confidence 9998655 4567888875 67666654332 23456665555544444 34556667778888888888763 4432
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccC
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFG 282 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G 282 (339)
+ |. .++++++.++ ....++.+.|...|+.++.|
T Consensus 306 ~--~~----------------~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~~ 338 (369)
T 3cq5_A 306 V--PS----------------ESNFVFFGDF--SDQHAAWQAFLDRGVLIRDV 338 (369)
T ss_dssp E--CC----------------SSSEEEEECC--SSHHHHHHHHHHTTEECBCC
T ss_pred C--CC----------------CCeEEEEECC--CCHHHHHHHHHHCCEEEEEC
Confidence 2 31 3567888775 23456677776778877644
No 128
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.77 E-value=1.3e-17 Score=160.02 Aligned_cols=242 Identities=12% Similarity=0.047 Sum_probs=153.9
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHH--HHH-HhcC--C----------CCEEEEcCCCccchHHHHH------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA--AVT-HLLG--T----------GEEIVAGDDLYGGTDRLLS------ 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~--~il-~ll~--~----------GD~Vi~~~~~y~~~~~~~~------ 111 (339)
....+|++.++++++.+ ++++++++++|+. .++ .++. | ||+|+++++.|.+....++
T Consensus 78 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~ 157 (427)
T 3ppl_A 78 DGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEM 157 (427)
T ss_dssp SCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEE
T ss_pred CCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEE
Confidence 45678999999998864 5667777788983 443 4566 6 9999999999987654433
Q ss_pred ----------------------------------------------HHHHHHH-HHcCCEEEEeCCcCCCCCcC-c----
Q 019543 112 ----------------------------------------------RKIAEMA-HAHGALLLVDNSIMSPVLSR-P---- 139 (339)
Q Consensus 112 ----------------------------------------------~~I~~la-~~~g~~livD~a~a~g~~~~-~---- 139 (339)
++|+++| ++||+++|+|++|+...+.. +
T Consensus 158 ~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~ 237 (427)
T 3ppl_A 158 ISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVI 237 (427)
T ss_dssp EEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCC
T ss_pred EEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCcc
Confidence 5899999 99999999999997643311 1
Q ss_pred --c-------cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh-------H
Q 019543 140 --L-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-------M 203 (339)
Q Consensus 140 --~-------~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~-------~ 203 (339)
. ..+.+++++||||+ +++| ...|+++++ +++++.+.......+...++.....+...++. +
T Consensus 238 ~~~~~~~~~~~~~~~i~~~S~SK~-~~~G-~r~G~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 314 (427)
T 3ppl_A 238 DIVGLGEAAGNPNRFWAFTSTSKI-TLAG-AGVSFFLTS-AENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVM 314 (427)
T ss_dssp CHHHHHHHTTCTTSEEEEEESTTT-SCTT-SSCEEEECC-HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHH
T ss_pred chhhhhhccCCCCcEEEEechhhc-cCcC-ccEEEEEcC-HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHH
Confidence 1 22457999999999 5455 456788876 47888887776666666666654443333322 2
Q ss_pred HHHHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeec
Q 019543 204 ALRVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITV 279 (339)
Q Consensus 204 ~~r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v 279 (339)
....+...++.+.+.+.|++ .+++. +..| ..+..+++.+.+. ...++.+.|.+.|+.+
T Consensus 315 ~~~~~~~~~~~~~l~~~L~~~l~~~~~~~-~~~p----------------~~g~~~~~~~~~~-~~~~~~~~l~~~gv~v 376 (427)
T 3ppl_A 315 RKHAASLAPKFNKVLEILDSRLAEYGVAQ-WTVP----------------AGGYFISLDVVPG-TASRVAELAKEAGIAL 376 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTCCE-ECCC----------------SBSSCEEEECSTT-CHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCceE-EeCC----------------CccEEEEEECCcc-hHHHHHHHHHHCCCEE
Confidence 23333344455555555543 22332 2222 1356788887543 3456777777789998
Q ss_pred ccCCc-ccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCC---HHHHHHHHHHHHh
Q 019543 280 SFGSV-KSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED---VNDLISDLDKALR 335 (339)
Q Consensus 280 ~~G~~-~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~---~~~li~~l~~al~ 335 (339)
+.|+. +... + +..++.+|||++..+ .++.++.|.++++
T Consensus 377 ~~~g~~~~~~-------~-----------~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~ 418 (427)
T 3ppl_A 377 TGAGSSYPLR-------Q-----------DPENKNLRLAPSLPPVEELEVAMDGVATCVL 418 (427)
T ss_dssp CCTTTTSGGG-------C-----------CTTSCEEEECCSSSCHHHHHHHHHHHHHHHH
T ss_pred ecCcCcCCCC-------C-----------CCCCCeEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 87442 1110 0 013578999998753 3344555555554
No 129
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.76 E-value=5.8e-17 Score=156.62 Aligned_cols=243 Identities=10% Similarity=0.044 Sum_probs=155.1
Q ss_pred HHHHHHHHHhHh----CC----CeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHH------------------
Q 019543 57 RDALESLLAKLD----KA----DRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRL------------------ 109 (339)
Q Consensus 57 ~~~le~~la~~~----g~----~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~------------------ 109 (339)
..+|++.+++++ |. ++++++++|++|+.++ ..+++|||+|+++++.|++....
T Consensus 97 ~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 176 (447)
T 3b46_A 97 RPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKE 176 (447)
T ss_dssp CHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGG
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccc
Confidence 456777777665 42 4677888889999864 45789999999998877654311
Q ss_pred -----------------HH----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC---c--
Q 019543 110 -----------------LS----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR---P-- 139 (339)
Q Consensus 110 -----------------~~----------------------------~~I~~la~~~g~~livD~a~a~g~~~~---~-- 139 (339)
+. ++|+++|++||++||+|++|+...+.. +
T Consensus 177 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~ 256 (447)
T 3b46_A 177 LDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIA 256 (447)
T ss_dssp GGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGG
T ss_pred cccccccccCcccCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHH
Confidence 11 889999999999999999997543311 1
Q ss_pred -c---cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh------HHHHHHH
Q 019543 140 -L---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALRVEK 209 (339)
Q Consensus 140 -~---~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~------~~~r~~~ 209 (339)
+ ..+.+++++|+||+++.+|. ..|+++++++++++.+...........++...+++...|+. ++...++
T Consensus 257 ~~~~~~~~~~i~i~S~sK~~~~~G~-riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~ 335 (447)
T 3b46_A 257 TLSPEIGQLTLTVGSAGKSFAATGW-RIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQE 335 (447)
T ss_dssp GSCHHHHTTEEEEEEHHHHTTCTTS-CCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HcCCCCCCcEEEEecCchhcCCcch-hhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHH
Confidence 1 12578999999999987665 45788883457888877665444445555544444344433 3445566
Q ss_pred HHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH---------------HHHHHHHccCC-
Q 019543 210 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---------------ALSKHVVETTK- 273 (339)
Q Consensus 210 ~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~---------------~~~~~~~~~L~- 273 (339)
..++.+++.+.|+++ ++.. ..|. .+..+++.+.+. ....+|++.|.
T Consensus 336 ~~~~~~~l~~~L~~~-g~~~-~~~~----------------~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~ 397 (447)
T 3b46_A 336 YINKFKIFTSIFDEL-GLPY-TAPE----------------GTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLIN 397 (447)
T ss_dssp HHHHHHHHHHHHHHH-TCCE-ECCS----------------BSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CCee-cCCC----------------eeEEEEEecccccCccccccccccccCCCHHHHHHHHHH
Confidence 677788888888875 4432 2221 345666666421 23456777664
Q ss_pred cceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 274 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 274 ~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..|+.+..|..+.. .+.. +..++.+|||++. .++.++...+.|++
T Consensus 398 ~~gV~v~pg~~f~~--~~~~--------------~~~~~~iRls~~~--~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 398 ELGVVAIPPTEFYI--KEHE--------------KAAENLLRFAVCK--DDAYLENAVERLKL 442 (447)
T ss_dssp HTCEECBCGGGGSC--GGGG--------------GGGTTEEEEECCS--CHHHHHHHHHHGGG
T ss_pred hCCEEEECchHhCC--CCcc--------------CCCCCEEEEEEeC--CHHHHHHHHHHHHH
Confidence 57888876643221 0000 0124789999985 34545666666554
No 130
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.76 E-value=3.7e-17 Score=156.84 Aligned_cols=234 Identities=13% Similarity=0.118 Sum_probs=157.1
Q ss_pred hHHHHHHHHHhHh-----CC--Ce---EEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHHHH-------------
Q 019543 56 TRDALESLLAKLD-----KA--DR---ALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 56 ~~~~le~~la~~~-----g~--~~---~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
...+|++.+++++ +. ++ ++++++|++|+.+++ .+++|||+|+++.+.|++....+.
T Consensus 89 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~ 168 (430)
T 2x5f_A 89 GIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIF 168 (430)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCB
T ss_pred CCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEecc
Confidence 3678999999988 54 46 777788899998654 578999999999987765432110
Q ss_pred -------------------------------------------HHHHHHHHH-----cCCEEEEeCCcCCCCCc-C---c
Q 019543 112 -------------------------------------------RKIAEMAHA-----HGALLLVDNSIMSPVLS-R---P 139 (339)
Q Consensus 112 -------------------------------------------~~I~~la~~-----~g~~livD~a~a~g~~~-~---~ 139 (339)
++|+++|++ ||+++|+|++|+..... . +
T Consensus 169 ~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~ 248 (430)
T 2x5f_A 169 DKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQS 248 (430)
T ss_dssp CTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSC
T ss_pred CccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchH
Confidence 789999999 99999999999754331 1 1
Q ss_pred c-----c-CCC---eEEEeccccccccCCCceEEEEEE--cChhHHHHHHHHHHh----cCCCCChHHHHHHHhchh-h-
Q 019543 140 L-----E-LGA---DIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQNA----EGSGLAPFDCWICLRGVK-T- 202 (339)
Q Consensus 140 ~-----~-~~~---Di~~~S~sK~l~g~~~~~gG~v~~--~~~~l~~~l~~~~~~----~~~~~~~~~a~~~~~~l~-~- 202 (339)
+ . .+. +++++|+||+++.+|. ..|++++ +++++.+.+...... .....++...+.+...|+ .
T Consensus 249 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 327 (430)
T 2x5f_A 249 LFTALTNLHSNAILPIRLDGATKEFFAWGF-RVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNK 327 (430)
T ss_dssp HHHHHHTTCCTTEEEEEEEEHHHHTTCGGG-CCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCH
T ss_pred HHHHHhhccCCcceEEEEEecccCCCCCCC-CeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccCh
Confidence 1 1 234 6889999999986654 4578877 234777877765543 445567766655555555 2
Q ss_pred --HHH---HHHHHHHHHHHHHHHHhCC---CCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCCHHHHHHHHccCC
Q 019543 203 --MAL---RVEKQQDNAQKIAEFLASH---PRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVETTK 273 (339)
Q Consensus 203 --~~~---r~~~~~~~a~~l~~~L~~~---~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~~~~~~~~~~L~ 273 (339)
.+. ..++..++.+++.+.|+++ .+++. .+ ..++ .+++.+.+ ....+|.+.|.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~--~~----------------~~~g~~~~~~~~~-~~~~~~~~~l~ 388 (430)
T 2x5f_A 328 QFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQA--YD----------------FNSGYFMAIKVHD-VDPEALRKHLI 388 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEE--CC----------------CCBSSEEEEEESS-SCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcee--eC----------------CCceEEEEeCCCC-CCHHHHHHHHH
Confidence 222 5666677888888888732 13321 11 1233 47777752 23456777776
Q ss_pred c-ceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEec---cCCHHHHHHHHHHHHhc
Q 019543 274 Y-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLISDLDKALRT 336 (339)
Q Consensus 274 ~-~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg---~e~~~~li~~l~~al~~ 336 (339)
. .|+.++.| .++.+|||++ .++.++.++.|.+++++
T Consensus 389 ~~~gi~v~~g---------------------------~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 389 DKYSIGVIAL---------------------------NATDIRIAFSCVEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp HHHCEECEEC---------------------------SSSEEEEEGGGSCGGGHHHHHHHHHHHHHH
T ss_pred HhCCEEEecC---------------------------CCCeEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 6 78876643 1257999999 34566667777776654
No 131
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.76 E-value=4.3e-17 Score=156.31 Aligned_cols=237 Identities=12% Similarity=0.106 Sum_probs=150.6
Q ss_pred HHHHHHHHHhHhC----------CCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHH-----------------
Q 019543 57 RDALESLLAKLDK----------ADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDR----------------- 108 (339)
Q Consensus 57 ~~~le~~la~~~g----------~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~----------------- 108 (339)
..+|++.++++++ .+..++++++++|+.++ ..+++|||+|+++++.|++...
T Consensus 85 ~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~ 164 (428)
T 1iay_A 85 LPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCES 164 (428)
T ss_dssp CHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCT
T ss_pred cHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCC
Confidence 6788888888875 34566666778898754 4578999999999987765431
Q ss_pred -------------HH--------H----------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C---c-c
Q 019543 109 -------------LL--------S----------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R---P-L 140 (339)
Q Consensus 109 -------------~~--------~----------------------~~I~~la~~~g~~livD~a~a~g~~~-~---~-~ 140 (339)
.+ + ++|+++|++||++||+|++|+.+.+. . . .
T Consensus 165 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~ 244 (428)
T 1iay_A 165 SNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIA 244 (428)
T ss_dssp TTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHH
T ss_pred ccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHH
Confidence 01 0 88999999999999999999764321 1 1 1
Q ss_pred c--CC-------Ce--EEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh-------
Q 019543 141 E--LG-------AD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------- 202 (339)
Q Consensus 141 ~--~~-------~D--i~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~------- 202 (339)
. .. .| +++.|+||.+|.+| ...|+++++++++++.++..... ...++...+++...++.
T Consensus 245 ~~~~~~~~~~~~~d~viv~~s~sK~~g~~G-lr~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~ 321 (428)
T 1iay_A 245 EILDEQEMTYCNKDLVHIVYSLSKDMGLPG-FRVGIIYSFNDDVVNCARKMSSF--GLVSTQTQYFLAAMLSDEKFVDNF 321 (428)
T ss_dssp HHHTSGGGTTSCTTSEEEEEESTTTSSCGG-GCEEEEEESCHHHHHHHHHHHTT--SCCCHHHHHHHHHHTTCHHHHHHH
T ss_pred HhccccccccCCCCcEEEEecchhhcCCCC-ceEEEEEeCCHHHHHHHHHHHhc--ccCCHHHHHHHHHHhcChHHHHHH
Confidence 1 12 57 89999999998655 45678888555677777655432 23455544444433332
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH------HHHHHHHccCCc-c
Q 019543 203 MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL------ALSKHVVETTKY-F 275 (339)
Q Consensus 203 ~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~------~~~~~~~~~L~~-~ 275 (339)
++...++..++.+++.+.|+++ +++. ++. ..+.++++.+.+. ....++.+.|.. .
T Consensus 322 ~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~~---------------~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 383 (428)
T 1iay_A 322 LRESAMRLGKRHKHFTNGLEVV-GIKC--LKN---------------NAGLFCWMDLRPLLRESTFDSEMSLWRVIINDV 383 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCB--CCC---------------SSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCcc--cCC---------------CeeEEEEEechhhcCCCchhHHHHHHHHHHHhC
Confidence 3445556667788888888876 4431 121 1345677777432 244567777765 4
Q ss_pred eeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEecc---CCHHHHHHHHHHHHh
Q 019543 276 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALR 335 (339)
Q Consensus 276 ~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~---e~~~~li~~l~~al~ 335 (339)
|+.++.|..+.. ..++.+|||++. ++.+.+++.|.++++
T Consensus 384 gi~v~~~~~~~~---------------------~~~~~iRis~~~~~~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 384 KLNVSPGSSFEC---------------------QEPGWFRVCFANMDDGTVDIALARIRRFVG 425 (428)
T ss_dssp CEECEEGGGGTC---------------------SSSSEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred CEEEeCchhhCC---------------------CCCCEEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 888776542110 024689999983 223344444544444
No 132
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.76 E-value=6.7e-18 Score=158.67 Aligned_cols=231 Identities=16% Similarity=0.190 Sum_probs=156.7
Q ss_pred CCchHHHHHHHHHhHhCC-CeEEEcCcHHHHHHHHHH----hc---CCC-CEEEEcCCCccchHH---------------
Q 019543 53 GNPTRDALESLLAKLDKA-DRALCFTSGMAALAAVTH----LL---GTG-EEIVAGDDLYGGTDR--------------- 108 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~-~~~l~~~sG~~A~~~il~----ll---~~G-D~Vi~~~~~y~~~~~--------------- 108 (339)
..+...+|++++++++|. +++++++||++|+.+++. +. +|| |+|+++++.|++...
T Consensus 68 ~~~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~ 147 (375)
T 2eh6_A 68 ENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGF 147 (375)
T ss_dssp CCHHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTT
T ss_pred CCHHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCC
Confidence 356788999999999998 788899999999975442 34 788 999999988765310
Q ss_pred ----------------HHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCc--c
Q 019543 109 ----------------LLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRP--L 140 (339)
Q Consensus 109 ----------------~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~--~ 140 (339)
.++ ++|.++|++||+++|+|++|+ .+..... .
T Consensus 148 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (375)
T 2eh6_A 148 EPLVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAY 227 (375)
T ss_dssp CSCCSSEEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGG
T ss_pred CCCCCCceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhh
Confidence 011 789999999999999999998 4332221 1
Q ss_pred -cCC--CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHHHHHHHHHHHHHHH
Q 019543 141 -ELG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKI 217 (339)
Q Consensus 141 -~~~--~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~~r~~~~~~~a~~l 217 (339)
..+ .|++ |+||++++ | ...|++++++ ++++.++......+...++...+.+...|+.+....++..++++++
T Consensus 228 ~~~~~~~d~~--s~SK~~~~-g-~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l 302 (375)
T 2eh6_A 228 QHFNLKPDVI--ALAKGLGG-G-VPIGAILARE-EVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGNYF 302 (375)
T ss_dssp GGGTCCCSEE--EECGGGGT-T-SCCEEEEEEH-HHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCCCCEE--EEcccccC-C-CCeEEEEEcH-HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223 6877 67799995 3 3456777764 5655554311112344567766666666766655667777888889
Q ss_pred HHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCC
Q 019543 218 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHA 297 (339)
Q Consensus 218 ~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~ 297 (339)
.+.|++++. .. . .+.+.++++.+.+ ...++.+.|...|+.+..+
T Consensus 303 ~~~L~~~~~-~~--~----------------~~~g~~~~~~~~~--~~~~~~~~l~~~gi~~~~~--------------- 346 (375)
T 2eh6_A 303 KEKLKELGK-GK--V----------------KGRGLMLGLELER--ECKDYVLKALEKGLLINCT--------------- 346 (375)
T ss_dssp HHHHHHTTS-SE--E----------------EEETTEEEEECSS--CCHHHHHHHHHTTEECEEE---------------
T ss_pred HHHHHHHhc-CC--c----------------eEEEEEEEEEEcC--cHHHHHHHHHHCCCEEecC---------------
Confidence 998887643 11 1 1246788888753 1345666665566655421
Q ss_pred CCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 298 SIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 298 ~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.++.+|||++...+++.++.+.++|++
T Consensus 347 ------------~~~~iRi~~~~~~~~~~i~~~~~~l~~ 373 (375)
T 2eh6_A 347 ------------AGKVLRFLPPLIIQKEHIDRAISVLRE 373 (375)
T ss_dssp ------------TTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred ------------CCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 136799999877777777777777764
No 133
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.75 E-value=2.6e-17 Score=160.81 Aligned_cols=171 Identities=20% Similarity=0.180 Sum_probs=114.4
Q ss_pred CCchHHHHH----HHHHhHhCCCe-----EEEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchH---------------
Q 019543 53 GNPTRDALE----SLLAKLDKADR-----ALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTD--------------- 107 (339)
Q Consensus 53 ~~~~~~~le----~~la~~~g~~~-----~l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~--------------- 107 (339)
+++..+++| +++++++|.+. .++++||++|+.+ +.++++|||+|+++++.|++..
T Consensus 84 ~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G 163 (483)
T 1rv3_A 84 GTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATS 163 (483)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHH
T ss_pred cchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCccccc
Confidence 345566666 88999999873 4899999988876 5568999999999875443221
Q ss_pred -----------------------HHHH--------------------HHHHHHHHHcCCEEEEeCCcCCCCC-----cCc
Q 019543 108 -----------------------RLLS--------------------RKIAEMAHAHGALLLVDNSIMSPVL-----SRP 139 (339)
Q Consensus 108 -----------------------~~~~--------------------~~I~~la~~~g~~livD~a~a~g~~-----~~~ 139 (339)
..+. ++|.++|++||++|++|++|+.|.. ..+
T Consensus 164 ~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p 243 (483)
T 1rv3_A 164 IFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSP 243 (483)
T ss_dssp HHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCG
T ss_pred ceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCC
Confidence 0110 9999999999999999999975532 223
Q ss_pred ccCCCeEEEeccccccccCCCceEEEEEEcCh--------------hHHHHHHHHHH--hcCCCCChHHHH--HHHhch-
Q 019543 140 LELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------RLAKELYFLQN--AEGSGLAPFDCW--ICLRGV- 200 (339)
Q Consensus 140 ~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~--------------~l~~~l~~~~~--~~~~~~~~~~a~--~~~~~l- 200 (339)
++ ++|++++|+||+|+|+ .||+++++++ ++...+..... ..|+...+..++ .++..+
T Consensus 244 ~~-~~div~~s~~K~l~Gp---rgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~ 319 (483)
T 1rv3_A 244 FE-HCHVVTTTTHKTLRGC---RAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAM 319 (483)
T ss_dssp GG-TCSEEEEESSGGGCCC---SCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHT
T ss_pred CC-CCcEEEecCcccCCCC---CceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHh
Confidence 33 6899999999999764 4689998864 12333322111 112222222222 122222
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 201 -KTMALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 201 -~~~~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
+.++.+.++..++++++.+.|+++ +++
T Consensus 320 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 347 (483)
T 1rv3_A 320 TPEFKEYQRQVVANCRALSAALVEL-GYK 347 (483)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHhc-CCE
Confidence 245677888889999999999887 554
No 134
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.75 E-value=9.1e-17 Score=153.07 Aligned_cols=212 Identities=13% Similarity=0.079 Sum_probs=135.2
Q ss_pred CchHHHHHHHHHhHh------C--CCeEEEcCcHHHHHHHHH-HhcCCCC-----EEEEc-CCCccchHHHH--------
Q 019543 54 NPTRDALESLLAKLD------K--ADRALCFTSGMAALAAVT-HLLGTGE-----EIVAG-DDLYGGTDRLL-------- 110 (339)
Q Consensus 54 ~~~~~~le~~la~~~------g--~~~~l~~~sG~~A~~~il-~ll~~GD-----~Vi~~-~~~y~~~~~~~-------- 110 (339)
.....+|++.+++++ + .++++++++|++|+.+++ .++++|| +|+++ .+.|++.....
T Consensus 74 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~ 153 (417)
T 3g7q_A 74 PQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVS 153 (417)
T ss_dssp TTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEE
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhcc
Confidence 344667888888775 2 357889999999998654 5789988 89987 77765543110
Q ss_pred ------------------------H------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-----
Q 019543 111 ------------------------S------------------------RKIAEMAHAHGALLLVDNSIMSPVLS----- 137 (339)
Q Consensus 111 ------------------------~------------------------~~I~~la~~~g~~livD~a~a~g~~~----- 137 (339)
. ++|+++|++||+++|+|++|+.+...
T Consensus 154 ~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~ 233 (417)
T 3g7q_A 154 ARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSE 233 (417)
T ss_dssp CCCEEEEEGGGEEEEECCGGGCCCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSC
T ss_pred ccCcccccCCcccccccCHHHhccccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccc
Confidence 0 88999999999999999999753211
Q ss_pred -CcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh------HHH-HHHH
Q 019543 138 -RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MAL-RVEK 209 (339)
Q Consensus 138 -~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~------~~~-r~~~ 209 (339)
.+...+.+++++|+|| ++++| ...|+++++ +++.+.++......+...+++..+++...++. ... ..+.
T Consensus 234 ~~~~~~~~~i~~~s~sK-~~~~G-~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 310 (417)
T 3g7q_A 234 ARPLWNPNIILCMSLSK-LGLPG-SRCGIIIAN-DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPF 310 (417)
T ss_dssp CCCCCCTTEEEEEESGG-GTCTT-SCCEEEECC-HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHH
T ss_pred cccCCCCCEEEEEechh-ccCCC-cceEEEEeC-HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHH
Confidence 1112356899999999 56555 456788775 47888888777666655566554444333322 111 2334
Q ss_pred HHHHHHHHHHHHhC-CCCce-EEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHHccCCcceeecccCCc
Q 019543 210 QQDNAQKIAEFLAS-HPRVK-KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSV 284 (339)
Q Consensus 210 ~~~~a~~l~~~L~~-~~~i~-~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~~~~i~v~~G~~ 284 (339)
..++.+.+.+.|++ ++.+. .+..| ..+..+++.+.. .....++.+.|...|+.++.|..
T Consensus 311 ~~~~~~~~~~~l~~~l~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~ 372 (417)
T 3g7q_A 311 YYQRVQQTIAIIRRYLSEERCLIHKP----------------EGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHY 372 (417)
T ss_dssp HHHHHHHHHHHHHHHCCTTTCEEECC----------------CBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGG
T ss_pred HHHHHHHHHHHHHHhcccCCceeeCC----------------CcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchh
Confidence 45566667777765 44321 12222 135677777753 23355677777778998887653
No 135
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.75 E-value=1.4e-16 Score=156.22 Aligned_cols=181 Identities=15% Similarity=0.158 Sum_probs=119.5
Q ss_pred CcccCCCCchHHHHHHHHHhHhC-----CCeEEEcCcHHHHHHHHH-HhcCCCC----EEEEcCCCccchHHHHH-----
Q 019543 47 YDYTRSGNPTRDALESLLAKLDK-----ADRALCFTSGMAALAAVT-HLLGTGE----EIVAGDDLYGGTDRLLS----- 111 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g-----~~~~l~~~sG~~A~~~il-~ll~~GD----~Vi~~~~~y~~~~~~~~----- 111 (339)
|..+.+..+.++++.+.+++..| .+++++++++++|+..++ .++++|| +|+++.+.|......+.
T Consensus 125 Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~ 204 (498)
T 3ihj_A 125 YSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAI 204 (498)
T ss_dssp ---CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCE
T ss_pred CCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCE
Confidence 33443333566677777766664 357888888899998655 4788875 99999998875543222
Q ss_pred -----------------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC
Q 019543 112 -----------------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR 138 (339)
Q Consensus 112 -----------------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~ 138 (339)
++|+++|++||++||+|++|+...+..
T Consensus 205 ~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~ 284 (498)
T 3ihj_A 205 QVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSP 284 (498)
T ss_dssp EEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCT
T ss_pred EEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCC
Confidence 779999999999999999998765432
Q ss_pred c--c-c-------CC------C-eEEEeccccccccCCCceEEEEEE--cChhHHHHHHHHHHhcCCCCChHHHHHHHhc
Q 019543 139 P--L-E-------LG------A-DIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQNAEGSGLAPFDCWICLRG 199 (339)
Q Consensus 139 ~--~-~-------~~------~-Di~~~S~sK~l~g~~~~~gG~v~~--~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~ 199 (339)
. . . .+ . .|+++||||.+.|..+.++||++. .++++++.+....... ...+....+++...
T Consensus 285 ~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~q~a~~~~ 363 (498)
T 3ihj_A 285 DCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVR-LCPPVSGQAAMDIV 363 (498)
T ss_dssp TCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHS-CCCCHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhcc-CCCCHHHHHHHHHH
Confidence 1 1 1 01 1 278899999995433456778774 4567888887766533 23333332222221
Q ss_pred --------------hhhHHHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 200 --------------VKTMALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 200 --------------l~~~~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
++....+++++.++++++.+.|+++|+++
T Consensus 364 l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~ 406 (498)
T 3ihj_A 364 VNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIH 406 (498)
T ss_dssp TCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred hcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 22334556777888999999999888764
No 136
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.75 E-value=1.5e-16 Score=149.52 Aligned_cols=241 Identities=12% Similarity=0.128 Sum_probs=151.9
Q ss_pred hHHHHHHHHHhHhCC------CeEEEcCcHHHHHHHHH-Hhc---CCCCEEEEcC-CCccchH-HHHH------------
Q 019543 56 TRDALESLLAKLDKA------DRALCFTSGMAALAAVT-HLL---GTGEEIVAGD-DLYGGTD-RLLS------------ 111 (339)
Q Consensus 56 ~~~~le~~la~~~g~------~~~l~~~sG~~A~~~il-~ll---~~GD~Vi~~~-~~y~~~~-~~~~------------ 111 (339)
...+++++++++++. +++++++||++|+.+++ .+. ++||+|++.+ +.|+... ..+.
T Consensus 39 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~ 118 (385)
T 2bkw_A 39 IFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL 118 (385)
T ss_dssp HHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC
Confidence 456788889988875 35677788899998654 466 8999987763 3333221 1110
Q ss_pred --------------------------------------HHHHHHHHHc--CCEEEEeCCcCCCCCc-CcccCCCeEEEec
Q 019543 112 --------------------------------------RKIAEMAHAH--GALLLVDNSIMSPVLS-RPLELGADIVMHS 150 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~--g~~livD~a~a~g~~~-~~~~~~~Di~~~S 150 (339)
++|.++|++| |+++|+|++|+.+... +....++|++++|
T Consensus 119 ~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s 198 (385)
T 2bkw_A 119 KIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTA 198 (385)
T ss_dssp STTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEE
T ss_pred CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEEEec
Confidence 9999999999 9999999999876542 2223478999999
Q ss_pred cccccccCCCceEEEEEEcChhHHH-HHH------------------HH-HHhc-C-----CCCChHHHHHHHhchhh--
Q 019543 151 ATKFIAGHSDVMAGVLAVKGERLAK-ELY------------------FL-QNAE-G-----SGLAPFDCWICLRGVKT-- 202 (339)
Q Consensus 151 ~sK~l~g~~~~~gG~v~~~~~~l~~-~l~------------------~~-~~~~-~-----~~~~~~~a~~~~~~l~~-- 202 (339)
+||+++|+.+. |++++++ ++.+ .++ .. .... + ...+....+.+...++.
T Consensus 199 ~~K~~~~~~G~--G~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 275 (385)
T 2bkw_A 199 SQKAIGAPAGL--SISLCSS-RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEIL 275 (385)
T ss_dssp SSSTTCCCSCE--EEEEECH-HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHH
T ss_pred CccccccCCcc--eEEEEcH-HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99998865432 7787765 4554 431 11 1111 1 23444433333333332
Q ss_pred ---HHHHHHHHHHHHHHHHHHH-hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceee
Q 019543 203 ---MALRVEKQQDNAQKIAEFL-ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSIT 278 (339)
Q Consensus 203 ---~~~r~~~~~~~a~~l~~~L-~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~ 278 (339)
++...++.+++++++.+.| +++ +++. ..|. +.. ...+++++|.+.+ ..++.+.|...|+.
T Consensus 276 ~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~-~~~~-~~~----------~~~~~~~~~~~~~---~~~~~~~l~~~gi~ 339 (385)
T 2bkw_A 276 EEGLHKRWDLHREMSDWFKDSLVNGL-QLTS-VSRY-PSN----------MSAHGLTAVYVAD---PPDVIAFLKSHGVV 339 (385)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHTTT-CCEE-SSCS-SST----------TBCSSCEEEECSC---HHHHHHHHHHTTEE
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHhc-Ccee-cccC-ccc----------ccCCceEEEecCC---HHHHHHHHHHCCeE
Confidence 3455677788899999999 876 5532 1111 000 0146789998865 45677777777888
Q ss_pred cccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEE-ec-------cCCHHHHHHHHHHHHhcC
Q 019543 279 VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS-VG-------IEDVNDLISDLDKALRTG 337 (339)
Q Consensus 279 v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRis-vg-------~e~~~~li~~l~~al~~~ 337 (339)
++.|.. +. ..++.+||| ++ .|+.+.+++.|.++++++
T Consensus 340 v~~g~~------~~----------------~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~~ 384 (385)
T 2bkw_A 340 IAGGIH------KD----------------IGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQRK 384 (385)
T ss_dssp CBCCCC------TT----------------TGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred EeCCCC------cc----------------cCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHhc
Confidence 776532 10 124679999 66 355666677777766553
No 137
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.75 E-value=2.8e-17 Score=152.51 Aligned_cols=208 Identities=15% Similarity=0.096 Sum_probs=135.4
Q ss_pred chHHHHHHHHHhHhCCC----eEEEcCcHHHHHHHHHH-hcCCCCEEEEcCCCccch--HHHHH----------------
Q 019543 55 PTRDALESLLAKLDKAD----RALCFTSGMAALAAVTH-LLGTGEEIVAGDDLYGGT--DRLLS---------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~----~~l~~~sG~~A~~~il~-ll~~GD~Vi~~~~~y~~~--~~~~~---------------- 111 (339)
+..+++++++++++|.+ .+++++||++|+..++. +++ |+|+++++.|++. ....+
T Consensus 33 ~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 110 (353)
T 2yrr_A 33 RVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPGEP 110 (353)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHHHHHHHHHHTTCCEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchHHHHHHHHHcCCceEEEeCCCCCC
Confidence 45789999999999973 45666778999987665 444 8999988877653 11111
Q ss_pred ---------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcc-cCCCeEEEecccccccc
Q 019543 112 ---------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPL-ELGADIVMHSATKFIAG 157 (339)
Q Consensus 112 ---------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~-~~~~Di~~~S~sK~l~g 157 (339)
++|.++|++||+++|+|++|+.+.....+ ..+.|++++|++|++++
T Consensus 111 ~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~ 190 (353)
T 2yrr_A 111 VDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSA 190 (353)
T ss_dssp CCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCC
T ss_pred CCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccC
Confidence 99999999999999999999866432222 24679999999998876
Q ss_pred CCCceEEEEEEcChhHHHHHH----------HH---H--HhcCCCCChHHHHHHHhchhh-----HHHHHHHHHHHHHHH
Q 019543 158 HSDVMAGVLAVKGERLAKELY----------FL---Q--NAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKI 217 (339)
Q Consensus 158 ~~~~~gG~v~~~~~~l~~~l~----------~~---~--~~~~~~~~~~~a~~~~~~l~~-----~~~r~~~~~~~a~~l 217 (339)
+.+ .|++++++ ++.+.++ .. . .......+....+.+...++. ++...++..++++++
T Consensus 191 ~~g--~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 267 (353)
T 2yrr_A 191 PPG--LAPIAASL-EARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWV 267 (353)
T ss_dssp CSS--CEEEEECH-HHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCc--eEEEEECH-HHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 543 37888875 5665553 11 1 112233444433322233332 445567777888899
Q ss_pred HHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCC
Q 019543 218 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGS 283 (339)
Q Consensus 218 ~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~ 283 (339)
.+.|++. +++.+. |. ...+.+++|.+++.....++.+.|...|+.++.|.
T Consensus 268 ~~~L~~~-g~~~~~-~~--------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~ 317 (353)
T 2yrr_A 268 LEELKAR-GFRPYP-KA--------------SPLPTVLVVRPPEGVDADRLVRALYAEGVAVAGGI 317 (353)
T ss_dssp HHHHHHT-TCEESC-SS--------------SBCTTEEEEECCTTCCHHHHHHHHHHTTEECEECC
T ss_pred HHHHHHC-CCcccc-Cc--------------cCCCeEEEEECCCCCCHHHHHHHHHHCCEEEeCCc
Confidence 9999876 554211 21 01356778887422234567777766788877554
No 138
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.75 E-value=3.9e-17 Score=155.75 Aligned_cols=206 Identities=21% Similarity=0.213 Sum_probs=130.7
Q ss_pred hHHHHH-HHHHhHhCCCeEE-EcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchH---H---------------------
Q 019543 56 TRDALE-SLLAKLDKADRAL-CFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTD---R--------------------- 108 (339)
Q Consensus 56 ~~~~le-~~la~~~g~~~~l-~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~---~--------------------- 108 (339)
..+++. +.+++++|.+.+. +++||++|+..+ ..+++|||+|+++++.|++.. .
T Consensus 78 ~~~~~a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 157 (425)
T 3ecd_A 78 EVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTM 157 (425)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTS
T ss_pred HHHHHHHHHHHHHhCCCCceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccC
Confidence 445544 7789999998875 499999999754 457899999999999886611 0
Q ss_pred ---------HHH--------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-----CcccCCCeEEEeccccc
Q 019543 109 ---------LLS--------------------RKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSATKF 154 (339)
Q Consensus 109 ---------~~~--------------------~~I~~la~~~g~~livD~a~a~g~~~-----~~~~~~~Di~~~S~sK~ 154 (339)
.+. ++|.++|++||++||+|++|+.|... ..+. .+|++++|+||+
T Consensus 158 ~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~-~~di~~~s~sK~ 236 (425)
T 3ecd_A 158 LIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVE-HAHVVTSTTHKT 236 (425)
T ss_dssp SCCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEESSGG
T ss_pred ccCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchh-cCcEEEecCCcc
Confidence 000 99999999999999999998655331 2222 379999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHHHHh--cCCCCChHHHHH--HH-hch-hhHHHHHHHHHHHHHHHHHHHhCCCCce
Q 019543 155 IAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSGLAPFDCWI--CL-RGV-KTMALRVEKQQDNAQKIAEFLASHPRVK 228 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--~~~~~~~~~a~~--~~-~~l-~~~~~r~~~~~~~a~~l~~~L~~~~~i~ 228 (339)
++|+ .||+++++++.+.+.+...... .+....+..+++ +. ..+ +.++...++..++.+++.+.|++. ++.
T Consensus 237 l~g~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 312 (425)
T 3ecd_A 237 LRGP---RGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVD 312 (425)
T ss_dssp GCCC---SCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred cCCC---CcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCe
Confidence 9753 4789988866666666554321 112222222222 11 112 345667777888888999999874 333
Q ss_pred EEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCCcceeecccC
Q 019543 229 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFG 282 (339)
Q Consensus 229 ~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~~~~i~v~~G 282 (339)
. ..| .+.+.++++.+.+. .....+.+.|+..|+.++.+
T Consensus 313 ~-~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~ 351 (425)
T 3ecd_A 313 L-VTG---------------GTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKN 351 (425)
T ss_dssp E-GGG---------------SCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEC
T ss_pred e-ccC---------------CCCceEEEEEeCCCCCCHHHHHHHHHHcCCEeccc
Confidence 2 111 12466888876421 22345566666678887743
No 139
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.75 E-value=6.7e-17 Score=154.13 Aligned_cols=232 Identities=12% Similarity=0.045 Sum_probs=147.8
Q ss_pred chHHHHHHHHHhHhCCC---eEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 55 PTRDALESLLAKLDKAD---RALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
+.++++.+.+....+.+ ++++++||++|+..+ ..+++|||+|+++++.|.+....+.
T Consensus 83 ~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 162 (413)
T 3t18_A 83 DYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFN 162 (413)
T ss_dssp HHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBC
T ss_pred HHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcC
Confidence 44555555555555566 788888999999864 4588999999999988865542221
Q ss_pred ---------------------------------------HHHHHHHH------HcCCEEEEeCCcCCCCC-cC---cc-c
Q 019543 112 ---------------------------------------RKIAEMAH------AHGALLLVDNSIMSPVL-SR---PL-E 141 (339)
Q Consensus 112 ---------------------------------------~~I~~la~------~~g~~livD~a~a~g~~-~~---~~-~ 141 (339)
++|+++|+ +||++||+|++|..... +. .+ .
T Consensus 163 ~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 242 (413)
T 3t18_A 163 IDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFE 242 (413)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGG
T ss_pred HHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHH
Confidence 66777777 89999999999853221 11 11 1
Q ss_pred ----CCCe---EEEeccccccccCCCceEEEEEEc--ChhHHHHHHHHHHhc----CCCCChHHHHHHHhchhh------
Q 019543 142 ----LGAD---IVMHSATKFIAGHSDVMAGVLAVK--GERLAKELYFLQNAE----GSGLAPFDCWICLRGVKT------ 202 (339)
Q Consensus 142 ----~~~D---i~~~S~sK~l~g~~~~~gG~v~~~--~~~l~~~l~~~~~~~----~~~~~~~~a~~~~~~l~~------ 202 (339)
...+ ++++|+||.++.+|. ..|++++. ++++++.+....... ....+.....++...++.
T Consensus 243 ~~~~~~~~~~~i~~~S~sK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 321 (413)
T 3t18_A 243 KFSNLPRNLFVVVAFSMSKSHTAYGL-RSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIY 321 (413)
T ss_dssp GGTTCCTTEEEEEEEEHHHHTTCGGG-CCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHH
T ss_pred HHhhcCCCeeEEEEEecCccCCCcCc-CcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHH
Confidence 1112 788999999997664 45677762 457888777654322 123555555444444432
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeec
Q 019543 203 ---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITV 279 (339)
Q Consensus 203 ---~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v 279 (339)
.....++..++.+++.+.|+.+ +++. ..| ..+.++++.+.+ ..+|.+.|.+.|+.+
T Consensus 322 ~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~-~~~----------------~~~~~~~~~~~~---~~~~~~~l~~~gv~v 380 (413)
T 3t18_A 322 EQELVDLRNMLKSRADVFVTAAKEN-KLTM-IPY----------------FGGFFTFIPTDK---AFDIVKDLEKENIFT 380 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT-TCCC-BCC----------------CSSSCEEEECSC---HHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-CCCc-cCC----------------CceEEEEeCCCC---HHHHHHHHHhCCEEE
Confidence 2234555677778888888876 4331 111 022344554533 345666666677766
Q ss_pred ccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 280 SFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 280 ~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
+.| ++.+|||++..+.+++++.|.+++++
T Consensus 381 ~~g----------------------------~~~iRis~~~~~~~~~l~~l~~~l~~ 409 (413)
T 3t18_A 381 IPS----------------------------AKGIRVAICGVGEEKIPKLVQRLAFY 409 (413)
T ss_dssp EEC----------------------------SSEEEECTTTSCGGGHHHHHHHHHHH
T ss_pred ecC----------------------------CCceEEEEeeCCHHHHHHHHHHHHHH
Confidence 533 25799999976777779999998875
No 140
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.75 E-value=5.4e-17 Score=153.49 Aligned_cols=241 Identities=15% Similarity=0.143 Sum_probs=153.4
Q ss_pred chHHHHHHHHHhHhCCC---eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchH--HHHH-----------------
Q 019543 55 PTRDALESLLAKLDKAD---RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTD--RLLS----------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~--~~~~----------------- 111 (339)
+..+++++.+++++|.+ .+++++||++|+.+++ .++++||+|+++++.|.+.. ...+
T Consensus 51 ~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 130 (396)
T 2ch1_A 51 RTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPF 130 (396)
T ss_dssp HHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCCCCCC
Confidence 45789999999999975 3667788899998644 57899999999999888753 1211
Q ss_pred --------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-CcccCCCeEEEeccccccccC
Q 019543 112 --------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGH 158 (339)
Q Consensus 112 --------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g~ 158 (339)
++|.++|++||+++|+|++|+.|... .....++|+++.|++|+++++
T Consensus 131 d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~ 210 (396)
T 2ch1_A 131 SLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAP 210 (396)
T ss_dssp CHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCC
T ss_pred CHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccCC
Confidence 89999999999999999999866432 112346799999999998866
Q ss_pred CCceEEEEEEcChhHHHHHHHH--------------HHhc---------CCCCChHHHHHHHhchh-----hHHHHHHHH
Q 019543 159 SDVMAGVLAVKGERLAKELYFL--------------QNAE---------GSGLAPFDCWICLRGVK-----TMALRVEKQ 210 (339)
Q Consensus 159 ~~~~gG~v~~~~~~l~~~l~~~--------------~~~~---------~~~~~~~~a~~~~~~l~-----~~~~r~~~~ 210 (339)
.+. |++++++ ++++.+... +..+ ..+.+......+...++ .++...++.
T Consensus 211 ~g~--g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 287 (396)
T 2ch1_A 211 PGI--TPISISP-KALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRR 287 (396)
T ss_dssp SSC--EEEEECH-HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred CCe--EEEEECH-HHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 433 6887765 566655321 1111 12233332222222232 245567777
Q ss_pred HHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCc-ceeecccCCccccee
Q 019543 211 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLIS 289 (339)
Q Consensus 211 ~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~-~~i~v~~G~~~s~~~ 289 (339)
.++++++.+.|+++ +++. ..| ...+ ..+.+++|.++......++.+.|.. .|+.++.|..
T Consensus 288 ~~~~~~l~~~L~~~-g~~~-~~~----~~~~--------~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~----- 348 (396)
T 2ch1_A 288 IECAQILYEGLGKM-GLDI-FVK----DPRH--------RLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLG----- 348 (396)
T ss_dssp HHHHHHHHHHHHHH-TCCB-SSC----SGGG--------BCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCG-----
T ss_pred HHHHHHHHHHHHHC-CCee-ccC----Cccc--------cCCceEEEEcCCCCCHHHHHHHHHHhCCEEEecCcc-----
Confidence 78888899988876 4431 111 0000 1234788887522234567777754 4887765431
Q ss_pred ccccccCCCCCHHHHHhCCCCCCeEEEEe-cc----CCHHHHHHHHHHHHh
Q 019543 290 MPCFMSHASIPVEVRQARGLTEDLVRISV-GI----EDVNDLISDLDKALR 335 (339)
Q Consensus 290 ~p~~~~h~~~~~~~~~~~g~~~~~lRisv-g~----e~~~~li~~l~~al~ 335 (339)
+ ..++.+|||+ +. |+.+.+++.|.++++
T Consensus 349 -~-----------------~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~ 381 (396)
T 2ch1_A 349 -P-----------------TFGKAWRVGIMGECSTVQKIQFYLYGFKESLK 381 (396)
T ss_dssp -G-----------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred -c-----------------cCCCEEEEECCCCcCCHHHHHHHHHHHHHHHH
Confidence 1 1347899999 54 334555566655554
No 141
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.75 E-value=3.4e-17 Score=158.34 Aligned_cols=245 Identities=22% Similarity=0.190 Sum_probs=151.6
Q ss_pred CCchHHHHH----HHHHhHhCCCeEEE-cCcHHHHHHH-HHHhcCCCCEEEEcCCCccch--------H-----------
Q 019543 53 GNPTRDALE----SLLAKLDKADRALC-FTSGMAALAA-VTHLLGTGEEIVAGDDLYGGT--------D----------- 107 (339)
Q Consensus 53 ~~~~~~~le----~~la~~~g~~~~l~-~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~--------~----------- 107 (339)
+.+..+.+| +++++++|.+.+.+ ++||+.|+.+ +..+++|||+|+++++.|++. .
T Consensus 85 g~~~~~~~e~~a~~~la~~~g~~~~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 164 (447)
T 3h7f_A 85 GCEHVDVVENLARDRAKALFGAEFANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYG 164 (447)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEEC
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcC
Confidence 344444444 89999999998887 9999999975 455899999999998765441 0
Q ss_pred --------------HHHH--------------------HHHHHHHHHcCCEEEEeCCcCCCC-----CcCcccCCCeEEE
Q 019543 108 --------------RLLS--------------------RKIAEMAHAHGALLLVDNSIMSPV-----LSRPLELGADIVM 148 (339)
Q Consensus 108 --------------~~~~--------------------~~I~~la~~~g~~livD~a~a~g~-----~~~~~~~~~Di~~ 148 (339)
..+. ++|.++|++||++||+|++|..|. ...++. ++|+++
T Consensus 165 ~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~-~~di~~ 243 (447)
T 3h7f_A 165 VDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVP-HADVVS 243 (447)
T ss_dssp CCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT-TCSEEE
T ss_pred cCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCC-CCcEEE
Confidence 0110 999999999999999999986542 222332 579999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHHHHhc--CCCCChHHHHH--HHh-ch-hhHHHHHHHHHHHHHHHHHHHh
Q 019543 149 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE--GSGLAPFDCWI--CLR-GV-KTMALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 149 ~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~--~~~~~~~~a~~--~~~-~l-~~~~~r~~~~~~~a~~l~~~L~ 222 (339)
+|+||+++|+ .||++++++ ++.+.+......+ +....+..+++ ++. .+ +.++.+.++..++++++.+.|+
T Consensus 244 ~s~sK~l~G~---~gG~i~~~~-~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 319 (447)
T 3h7f_A 244 TTVHKTLGGG---RSGLIVGKQ-QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLM 319 (447)
T ss_dssp EESSGGGCCC---SCEEEEECG-GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCcCCCCC---CeEEEEECH-HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999854 578998875 6777776553322 22222222222 222 22 2456778888899999999998
Q ss_pred CC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCCcceeecccCCcccce-eccccccC
Q 019543 223 SH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLI-SMPCFMSH 296 (339)
Q Consensus 223 ~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~~~~i~v~~G~~~s~~-~~p~~~~h 296 (339)
+. +++..+. + ...+.++++.+.+. .....+.+.|+..|+.++.... ... ..|
T Consensus 320 ~~~~~~~g~~~~~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i-~~~~~~p----- 377 (447)
T 3h7f_A 320 APDVAKAGVSVVS-G---------------GTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAV-PNDPRPP----- 377 (447)
T ss_dssp SHHHHHTTCEEGG-G---------------SCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC----------------
T ss_pred hccccCCCeEEec-C---------------CCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccC-CCCCCCC-----
Confidence 75 3443221 1 11345677766321 1223334445556777662110 000 011
Q ss_pred CCCCHHHHHhCCCCCCeEEEEec--------cCCHHHHHHHHHHHHhc
Q 019543 297 ASIPVEVRQARGLTEDLVRISVG--------IEDVNDLISDLDKALRT 336 (339)
Q Consensus 297 ~~~~~~~~~~~g~~~~~lRisvg--------~e~~~~li~~l~~al~~ 336 (339)
..++.+||+.. .++.+.+++.|.++|+.
T Consensus 378 ------------~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 378 ------------MVTSGLRIGTPALATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp ---------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred ------------CCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 12456999864 35566667777776653
No 142
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.74 E-value=4.7e-17 Score=152.83 Aligned_cols=237 Identities=16% Similarity=0.098 Sum_probs=147.9
Q ss_pred chHHHHHHHHHhHhCCC---eEEE-cCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHH--HHH----------------
Q 019543 55 PTRDALESLLAKLDKAD---RALC-FTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDR--LLS---------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~-~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~--~~~---------------- 111 (339)
+..+++++++++++|.+ +.++ ++||++|+.++ ..+++|||+|+++++.|.+... ...
T Consensus 52 ~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 131 (376)
T 3f0h_A 52 STMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEHGKK 131 (376)
T ss_dssp HHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCC
Confidence 56789999999999875 4555 56779999854 4578999999998876654321 111
Q ss_pred --------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc-ccCCCeEEEeccccccccC
Q 019543 112 --------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP-LELGADIVMHSATKFIAGH 158 (339)
Q Consensus 112 --------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~-~~~~~Di~~~S~sK~l~g~ 158 (339)
++|.++|++||+++|+|++++.+..... ...++|++++|++|+++++
T Consensus 132 ~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~ 211 (376)
T 3f0h_A 132 LTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLACP 211 (376)
T ss_dssp CCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCC
T ss_pred CCHHHHHHhhccCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccccCC
Confidence 9999999999999999999987654222 2346899999999999954
Q ss_pred CCceEEEEEEcChhHHHHHHHHH-------------Hh--c--CCCCChHHHHH---HHhchhh---HHHHHHHHHHHHH
Q 019543 159 SDVMAGVLAVKGERLAKELYFLQ-------------NA--E--GSGLAPFDCWI---CLRGVKT---MALRVEKQQDNAQ 215 (339)
Q Consensus 159 ~~~~gG~v~~~~~~l~~~l~~~~-------------~~--~--~~~~~~~~a~~---~~~~l~~---~~~r~~~~~~~a~ 215 (339)
.+ .|++++++ ++.+.+.... .. . ....+....+. ++..++. ++...++..++++
T Consensus 212 ~G--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 288 (376)
T 3f0h_A 212 PG--ISVIVLAP-RGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAA 288 (376)
T ss_dssp SS--CEEEEECH-HHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred Cc--eEEEEECH-HHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 33 36777764 6666654310 00 0 11222211122 2222222 4556666777888
Q ss_pred HHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcc-eeecccCCcccceeccccc
Q 019543 216 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 216 ~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~-~i~v~~G~~~s~~~~p~~~ 294 (339)
++.+.|++++ +. + .+. . ....++.+...+ ....++.+.|... |+.++.|.. +
T Consensus 289 ~l~~~L~~~~-~~-~-~~~---~-----------~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~------~--- 341 (376)
T 3f0h_A 289 DFRAKIKDLP-FE-L-VSE---S-----------PANGVTSVHPTT-ANAYDIFLKLKDEYGIWICPNGG------E--- 341 (376)
T ss_dssp HHHHHTTTSS-EE-E-CCS---S-----------BBTTEEEEEESS-SCHHHHHHHHHHHSSEECEECCG------G---
T ss_pred HHHHHHHHcC-Cc-c-Ccc---c-----------cCceEEEEeCCC-CCHHHHHHHHHHhCCEEEecCcc------c---
Confidence 8888888763 22 1 111 0 123455454322 2345677777666 888775521 1
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..++.+|||++...+++.++.+.++|+
T Consensus 342 --------------~~~~~lRis~~~~~t~e~i~~~~~~l~ 368 (376)
T 3f0h_A 342 --------------MKDTIFRVGHIGALTHEDNTTLVNAFK 368 (376)
T ss_dssp --------------GTTTCEEEECCSSCCHHHHHHHHHHHH
T ss_pred --------------cCCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 134689999987555555555544443
No 143
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.74 E-value=4.2e-17 Score=155.26 Aligned_cols=204 Identities=24% Similarity=0.242 Sum_probs=128.8
Q ss_pred HHHHHHHHHhHhCCCeE-EEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchH---------------------------
Q 019543 57 RDALESLLAKLDKADRA-LCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTD--------------------------- 107 (339)
Q Consensus 57 ~~~le~~la~~~g~~~~-l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~--------------------------- 107 (339)
.+..++.+++++|.+.. ++++||++|+.++ ..+++|||+|+++.+.|++..
T Consensus 78 ~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 157 (420)
T 3gbx_A 78 EQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKID 157 (420)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCC
T ss_pred HHHHHHHHHHHhCCCCceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcC
Confidence 33455789999998866 4589999998754 558999999999887665411
Q ss_pred -----HHHH--------------------HHHHHHHHHcCCEEEEeCCcCCCCC-----cCcccCCCeEEEecccccccc
Q 019543 108 -----RLLS--------------------RKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAG 157 (339)
Q Consensus 108 -----~~~~--------------------~~I~~la~~~g~~livD~a~a~g~~-----~~~~~~~~Di~~~S~sK~l~g 157 (339)
..+. ++|.++|++||+++|+|++|+.+.. ..... ..|++++|+||+++|
T Consensus 158 ~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~g 236 (420)
T 3gbx_A 158 YDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAHVVTTTTHKTLAG 236 (420)
T ss_dssp HHHHHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSSEEEEESSGGGCS
T ss_pred HHHHHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccc-cCCEEEeecccCCCC
Confidence 0010 9999999999999999999875543 11222 479999999999975
Q ss_pred CCCceEEEEEEcC--hhHHHHHHHHHHh--cCCCCChHHHHH--HH-hch-hhHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 158 HSDVMAGVLAVKG--ERLAKELYFLQNA--EGSGLAPFDCWI--CL-RGV-KTMALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 158 ~~~~~gG~v~~~~--~~l~~~l~~~~~~--~~~~~~~~~a~~--~~-~~l-~~~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
+ .||++++++ +.+.+.+...... .+....+..+++ +. ..+ +.++.+.++..++++++.+.|++. ++..
T Consensus 237 ~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 312 (420)
T 3gbx_A 237 P---RGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKV 312 (420)
T ss_dssp C---SCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred C---CceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCee
Confidence 4 368998876 2565655543211 122222222221 22 222 345667788888899999999873 4432
Q ss_pred EecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCCcceeeccc
Q 019543 230 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSF 281 (339)
Q Consensus 230 v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~~~~i~v~~ 281 (339)
+. + .+.++++++.+.+. .....+.+.|+..|+.++.
T Consensus 313 ~~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~ 349 (420)
T 3gbx_A 313 VS-G---------------GTENHLFLLDLVDKNLTGKEADAALGRANITVNK 349 (420)
T ss_dssp GG-G---------------SCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEE
T ss_pred cc-C---------------CCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEecc
Confidence 11 1 12466788876431 1234555566666877664
No 144
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.74 E-value=8.4e-17 Score=152.12 Aligned_cols=241 Identities=16% Similarity=0.152 Sum_probs=149.4
Q ss_pred chHHHHHHHHHhHhCCCeEEEc-CcHHHHHHHHHHhcCCCCEEEEcCCCccchH--------------------------
Q 019543 55 PTRDALESLLAKLDKADRALCF-TSGMAALAAVTHLLGTGEEIVAGDDLYGGTD-------------------------- 107 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~-~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~-------------------------- 107 (339)
...+++++.+++++|.++.++| +||++|+.+++.++++||+|++.++.|++..
T Consensus 35 ~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~ 114 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVARQLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTE 114 (379)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHHHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCS
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHHhCCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccccccc
Confidence 4678899999999998766655 5889999876677789999999776443210
Q ss_pred --------------HHHH-------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEE
Q 019543 108 --------------RLLS-------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIV 147 (339)
Q Consensus 108 --------------~~~~-------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~ 147 (339)
..+. ++|.++|++||+++++|++++ |.. .+...+++|++
T Consensus 115 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~~~~~~~d~~ 193 (379)
T 3ke3_A 115 APKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLDMKELGIDVL 193 (379)
T ss_dssp SCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCCHHHHTCSEE
T ss_pred ccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccccccccCCCEE
Confidence 0111 799999999999999999998 643 22223588999
Q ss_pred EeccccccccCCCceEEEEEEcChhHHHHHHHH------------H----Hh------cCCCCChHHHHHHHhchhh---
Q 019543 148 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFL------------Q----NA------EGSGLAPFDCWICLRGVKT--- 202 (339)
Q Consensus 148 ~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~------------~----~~------~~~~~~~~~a~~~~~~l~~--- 202 (339)
++|++|+++++.+ +|++++++ ++.+.+... + .. +..+.++...+.+..+++.
T Consensus 194 ~~s~~K~l~~~~g--~g~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~ 270 (379)
T 3ke3_A 194 ISAPQKGWSSTPC--AGLVMLSA-AAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKE 270 (379)
T ss_dssp EECTTTTTCSCCC--EEEEEECH-HHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred EecchhhcCCCCc--eEEEEECH-HHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999987643 57888775 566655421 0 00 1124444433333333332
Q ss_pred --HHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCCHHHHHHHHccCCcceeec
Q 019543 203 --MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVETTKYFSITV 279 (339)
Q Consensus 203 --~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~~~~~~~~~~L~~~~i~v 279 (339)
++.+.++..++++++.+.|+++ +++.+. |. ...++ +..+..++.+. .+.+.|++.|+.+
T Consensus 271 ~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~-~~--------------~~~~~~i~~~~~~~~~~--~~~~~L~~~Gi~v 332 (379)
T 3ke3_A 271 IGFDILRDAQWELGNRVRKVLTDK-GIESVA-AE--------------GFEAPGVVVSYTERDDM--HKGSAFAEAGLQI 332 (379)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHT-TCCBSB-CT--------------TCBCSSEEEEECSCHHH--HSSHHHHHTTCCC
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHc-CCEecC-Cc--------------cccCceEEEEccCCcch--HHHHHHHHCCeEE
Confidence 3556667778888999999876 343211 10 01234 44444544332 2345566678877
Q ss_pred ccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccC----CHHHHHHHHHHHHh
Q 019543 280 SFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE----DVNDLISDLDKALR 335 (339)
Q Consensus 280 ~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e----~~~~li~~l~~al~ 335 (339)
+.|.. |.. .. + ...+.+|||++.. +.+.+++.|.++++
T Consensus 333 ~~g~~------~~~-~~---~--------~~~~~lRis~~~~~t~~di~~~~~~l~~~l~ 374 (379)
T 3ke3_A 333 AAGVP------LKV-GE---P--------DNFKTFRLGLFGLDKLTDIDGTVERFEKALD 374 (379)
T ss_dssp EECCC------CSS-CC---C--------TTCCEEEEECCSHHHHTCHHHHHHHHHHHHH
T ss_pred eCCcc------ccc-cc---c--------CcCCEEEEeCCcCCCHHHHHHHHHHHHHHHH
Confidence 65531 111 00 0 1357899999764 44555555555544
No 145
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.74 E-value=2.2e-17 Score=159.47 Aligned_cols=236 Identities=14% Similarity=0.132 Sum_probs=155.4
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hc---------CCC-CEEEEcCCCccchHH-------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LL---------GTG-EEIVAGDDLYGGTDR------------- 108 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll---------~~G-D~Vi~~~~~y~~~~~------------- 108 (339)
.++...+|++++++++|.+.+++++||++|+.+++. +. .+| |+|++.++.|++...
T Consensus 116 ~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~ 195 (439)
T 2oat_A 116 YNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYD 195 (439)
T ss_dssp EESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHT
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhccc
Confidence 357889999999999999999999999999985443 22 367 999998888765310
Q ss_pred ----------------------HH-H-------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCc
Q 019543 109 ----------------------LL-S-------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRP 139 (339)
Q Consensus 109 ----------------------~~-~-------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~ 139 (339)
.+ . ++|.++|++||++||+||+|. .+..+..
T Consensus 196 ~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~ 275 (439)
T 2oat_A 196 GFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRW 275 (439)
T ss_dssp TSCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred CCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcc
Confidence 01 0 899999999999999999994 2211221
Q ss_pred -----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHH--HHHHHHHH
Q 019543 140 -----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQD 212 (339)
Q Consensus 140 -----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~ 212 (339)
.....|++ |+||++++ |...+|++++++ ++++.+.......+...+|+.++.+...++.+. ...++.++
T Consensus 276 ~~~~~~~~~~Di~--t~sK~l~~-G~~~~G~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 351 (439)
T 2oat_A 276 LAVDYENVRPDIV--LLGKALSG-GLYPVSAVLCDD-DIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADK 351 (439)
T ss_dssp SGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECH-HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred hhHHHhCCCCcEE--EecccccC-CCCCeEEEEECH-HHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 12245866 88999995 313467888874 566555432112234567877776666666553 34566677
Q ss_pred HHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHHHHccCCcceeecccCCcccceec
Q 019543 213 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISM 290 (339)
Q Consensus 213 ~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~~~~~L~~~~i~v~~G~~~s~~~~ 290 (339)
+.+++.+.|+++. ...+.. .++.|.++++.+.+. ..+.++.+.|.+.|+.++.+
T Consensus 352 ~~~~l~~~L~~l~-~~~~~~---------------~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~-------- 407 (439)
T 2oat_A 352 LGIILRNELMKLP-SDVVTA---------------VRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPT-------- 407 (439)
T ss_dssp HHHHHHHHHTTSC-TTTEEE---------------EEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECCBS--------
T ss_pred HHHHHHHHHHHhc-CCCcEE---------------EEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEecC--------
Confidence 8888888887752 111100 123577888887542 23456777776667765421
Q ss_pred cccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 291 PCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 291 p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.++.+||++++..+++.++.+.++|+
T Consensus 408 -------------------~~~~iRi~~~~~~t~e~i~~~l~~l~ 433 (439)
T 2oat_A 408 -------------------HGDIIRFAPPLVIKEDELRESIEIIN 433 (439)
T ss_dssp -------------------SSSEEEECCCTTCCHHHHHHHHHHHH
T ss_pred -------------------CCCEEEEECccCCCHHHHHHHHHHHH
Confidence 23679999987666665555555554
No 146
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.74 E-value=2e-16 Score=151.36 Aligned_cols=242 Identities=14% Similarity=0.108 Sum_probs=151.1
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHH--HHH-HhcC--C---------CCEEEEcCCCccchHHHHH-------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA--AVT-HLLG--T---------GEEIVAGDDLYGGTDRLLS------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~--~il-~ll~--~---------GD~Vi~~~~~y~~~~~~~~------- 111 (339)
+...+|++.++++++.+ ++++++++++|+. +++ .++. | ||+|+++++.|.+....+.
T Consensus 70 ~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 149 (423)
T 3ez1_A 70 AGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELL 149 (423)
T ss_dssp TCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEE
T ss_pred CChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEE
Confidence 44678999999999864 6777777788986 544 4667 7 5999999999877653322
Q ss_pred ----------------------------------------------HHHHHHH-HHcCCEEEEeCCcCCCCCcC------
Q 019543 112 ----------------------------------------------RKIAEMA-HAHGALLLVDNSIMSPVLSR------ 138 (339)
Q Consensus 112 ----------------------------------------------~~I~~la-~~~g~~livD~a~a~g~~~~------ 138 (339)
++|+++| ++||+++|+|++|+...+..
T Consensus 150 ~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~ 229 (423)
T 3ez1_A 150 TVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEP 229 (423)
T ss_dssp EEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCC
T ss_pred eccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCC
Confidence 5899999 99999999999998432211
Q ss_pred --cc-------cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh-------
Q 019543 139 --PL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------- 202 (339)
Q Consensus 139 --~~-------~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~------- 202 (339)
.. ..+.++++.||||+ .++| ...|++++++ ++++.++......+...++....++...++.
T Consensus 230 ~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G-~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 306 (423)
T 3ez1_A 230 VNFVVLARDAGYPDRAFVFASTSKI-TFAG-AGLGFVASSE-DNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEG 306 (423)
T ss_dssp CCHHHHHHHHTCTTSEEEEEESTTT-SCSS-SSCEEEEECH-HHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHH
T ss_pred cchhhhhhccCCCCeEEEEeCchhh-ccCC-cceEEEEeCH-HHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHH
Confidence 11 22457999999998 3444 4567888764 7888888777666666676654444333332
Q ss_pred -HHHHHHHHHHHHHHHHHHH----hCCC-CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcce
Q 019543 203 -MALRVEKQQDNAQKIAEFL----ASHP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 276 (339)
Q Consensus 203 -~~~r~~~~~~~a~~l~~~L----~~~~-~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~ 276 (339)
+....+...++.+.+.+.| ...+ .+. +..| ..+..+++.+.+. ....+.+.|+..|
T Consensus 307 ~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~-~~~p----------------~~g~~~~~~~~~~-~~~~~~~~l~~~g 368 (423)
T 3ez1_A 307 LMRDHAAIIAPKFRAVDEVLRAELGEGGEYAT-WTLP----------------KGGYFISLDTAEP-VADRVVKLAEAAG 368 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEE-ECCC----------------SBSSCEEEEESSS-CHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcCCCceE-EeCC----------------CccEEEEEECCCC-cHHHHHHHHHHCC
Confidence 2222333333444444444 3343 232 2223 1356778877532 3456667777789
Q ss_pred eeccc-CCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCC---HHHHHHHHHHHHh
Q 019543 277 ITVSF-GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED---VNDLISDLDKALR 335 (339)
Q Consensus 277 i~v~~-G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~---~~~li~~l~~al~ 335 (339)
+.++. |..+..- . +..++.+|||++..+ .++.++.|.++++
T Consensus 369 v~v~~~g~~~~~~-~-----------------~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 413 (423)
T 3ez1_A 369 VSLTPAGATYPAG-Q-----------------DPHNRNLRLAPTRPPVEEVRTAMQVVAACIR 413 (423)
T ss_dssp EECCCTTTTSSTT-C-----------------CSSSCEEEECCSSSCHHHHHHHHHHHHHHHH
T ss_pred cEEecCcccccCC-C-----------------CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 98886 3322100 0 013578999998643 3344555555554
No 147
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.73 E-value=7.4e-17 Score=154.69 Aligned_cols=232 Identities=14% Similarity=0.159 Sum_probs=150.3
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcC-------CC-CEEEEcCCCccchHH---------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLG-------TG-EEIVAGDDLYGGTDR--------------- 108 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~-------~G-D~Vi~~~~~y~~~~~--------------- 108 (339)
.++..++|+++|++++|.+++++++||++|+.+++. +.. +| |+|++.++.|++...
T Consensus 97 ~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~ 176 (420)
T 2pb2_A 97 TNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGF 176 (420)
T ss_dssp CCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTS
T ss_pred CCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccC
Confidence 467899999999999999999999999999986554 433 77 589998888764310
Q ss_pred ----------------HHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCc---
Q 019543 109 ----------------LLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRP--- 139 (339)
Q Consensus 109 ----------------~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~--- 139 (339)
.++ ++|.++|++||++||+||+|. .+..+..
T Consensus 177 ~p~~~~~~~~~~~d~~~le~~i~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~ 256 (420)
T 2pb2_A 177 GPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAY 256 (420)
T ss_dssp SSCCSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHH
T ss_pred CCCCCCeEEecCCCHHHHHHHhccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHH
Confidence 000 889999999999999999994 2222222
Q ss_pred --ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH--HHHHHHHHHHHH
Q 019543 140 --LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQ 215 (339)
Q Consensus 140 --~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~--~~r~~~~~~~a~ 215 (339)
.....|++ |+||++++ | ...|++++++ ++++.++......+...+++.++.+...|+.+ +...++.+++.+
T Consensus 257 ~~~~~~~dii--t~sK~l~~-G-~~iG~~~~~~-~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~ 331 (420)
T 2pb2_A 257 MHYGVTPDIL--TSAKALGG-G-FPVSAMLTTQ-EIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQ 331 (420)
T ss_dssp HHHTCCCSEE--EECGGGGT-T-SCCEEEEECH-HHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHH
T ss_pred HhcCCCCCeE--EecccccC-C-CceEEEEEhH-HHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 12346876 68999994 4 3456777764 56655543222223456787777666666554 345666677778
Q ss_pred HHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHH--HHHHHHccCCcceeecccCCccccee
Q 019543 216 KIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA--LSKHVVETTKYFSITVSFGSVKSLIS 289 (339)
Q Consensus 216 ~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~--~~~~~~~~L~~~~i~v~~G~~~s~~~ 289 (339)
++.+.|++. +.+..+ ++.|.+++|.+.+.. ...++.+.|...|+.++.|
T Consensus 332 ~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~------- 386 (420)
T 2pb2_A 332 QFVQHLQAIDEQFDIFSDI------------------RGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNA------- 386 (420)
T ss_dssp HHHHHHHHHHHHHCCEEEE------------------EEETTEEEEEECGGGTTCHHHHHHHHHHTTEECEES-------
T ss_pred HHHHHHHHHHhcCCCeEEE------------------EecceEEEEEECCCchHHHHHHHHHHHHCCCEEEeC-------
Confidence 888877653 222111 225678888875432 3567777776677765532
Q ss_pred ccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 290 MPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 290 ~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
.++.+|||+.+..+++.++.+.++|
T Consensus 387 --------------------~~~~iRl~~~~~~t~eei~~~~~~l 411 (420)
T 2pb2_A 387 --------------------GADVMRFAPSLVVEEADIHEGMQRF 411 (420)
T ss_dssp --------------------STTEEEECCCTTCCHHHHHHHHHHH
T ss_pred --------------------CCCEEEEECCCCCCHHHHHHHHHHH
Confidence 1367999976544444444444443
No 148
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.73 E-value=5.7e-17 Score=156.17 Aligned_cols=234 Identities=12% Similarity=0.145 Sum_probs=151.0
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHh----------cCCC-CEEEEcCCCccchHH-------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL----------LGTG-EEIVAGDDLYGGTDR------------- 108 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~l----------l~~G-D~Vi~~~~~y~~~~~------------- 108 (339)
.++...+|+++|++++|.+.+++++||++|+.+++.+ +.+| |+|++.++.|++...
T Consensus 105 ~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~ 184 (433)
T 1z7d_A 105 FSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTS 184 (433)
T ss_dssp EEHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC-------------------
T ss_pred CCHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccc
Confidence 3567899999999999999999999999999864432 2478 999999888765310
Q ss_pred ----------------------HH-H-------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCc
Q 019543 109 ----------------------LL-S-------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRP 139 (339)
Q Consensus 109 ----------------------~~-~-------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~ 139 (339)
.+ . ++|.++|++||++||+||+|. .+..+..
T Consensus 185 ~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~ 264 (433)
T 1z7d_A 185 NFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKL 264 (433)
T ss_dssp -------CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred cCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcc
Confidence 11 0 899999999999999999995 2221221
Q ss_pred -----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHH--HHHHHHHH
Q 019543 140 -----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQD 212 (339)
Q Consensus 140 -----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~ 212 (339)
.....|++ |+||++++ |...+|++++++ ++++.+.......+...+|+.++.+...|+.+. ...++..+
T Consensus 265 ~~~~~~~~~~di~--t~sK~l~~-G~~~~G~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 340 (433)
T 1z7d_A 265 LCVHHYNVKPDVI--LLGKALSG-GHYPISAVLAND-DIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEK 340 (433)
T ss_dssp SGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECH-HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred hhhHhcCCCCCEE--EECccccC-CCCCeEEEEECH-HHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 12345776 78999994 313467888774 566554432112234567777776666666543 24556667
Q ss_pred HHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCCcceeecccCCcccc
Q 019543 213 NAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSL 287 (339)
Q Consensus 213 ~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~~~~i~v~~G~~~s~ 287 (339)
+.+++.+.|++. +.+.. .++.|.+++|.+.+. ..+.++.+.|...|+.++.+
T Consensus 341 ~~~~l~~~L~~l~~~~~~~~~------------------~~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~----- 397 (433)
T 1z7d_A 341 LGGPFLENLKRELKDSKIVRD------------------VRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDV----- 397 (433)
T ss_dssp HHHHHHHHHHHHHTTCTTEEE------------------EEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEE-----
T ss_pred HHHHHHHHHHHHHHhCCCeEE------------------EEeeeeEEEEEEccChhHHHHHHHHHHHCCeEEecC-----
Confidence 777777777643 22111 123577899988543 23557777776667765421
Q ss_pred eeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 288 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 288 ~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..+.+|+++++..+++.++.+.++|+
T Consensus 398 ----------------------~~~~iRi~~~~~~t~e~i~~~l~~l~ 423 (433)
T 1z7d_A 398 ----------------------HDKTIRLTPPLCITKEQLDECTEIIV 423 (433)
T ss_dssp ----------------------TTTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred ----------------------CCCEEEEECCcCCCHHHHHHHHHHHH
Confidence 13679999887666555555555554
No 149
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.72 E-value=1.5e-16 Score=151.87 Aligned_cols=230 Identities=15% Similarity=0.131 Sum_probs=141.8
Q ss_pred HHHHHHHHHh----HhCCC---eEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCccchHHHHH-----------------
Q 019543 57 RDALESLLAK----LDKAD---RALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 57 ~~~le~~la~----~~g~~---~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
..+|++.+++ ..+.+ ++++++||++|+..+ ..+++|||+|+++++.|.+....+.
T Consensus 82 ~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~ 161 (418)
T 3rq1_A 82 IPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNN 161 (418)
T ss_dssp CHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSS
T ss_pred hHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCC
Confidence 3455555555 44666 788888889999864 4588999999999998876542221
Q ss_pred -----------------------------------------HHHHHHHH------HcCCEEEEeCCcCCCCCc-C---c-
Q 019543 112 -----------------------------------------RKIAEMAH------AHGALLLVDNSIMSPVLS-R---P- 139 (339)
Q Consensus 112 -----------------------------------------~~I~~la~------~~g~~livD~a~a~g~~~-~---~- 139 (339)
++|+++|+ +||+++|+|++|...... . .
T Consensus 162 ~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 241 (418)
T 3rq1_A 162 FNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAF 241 (418)
T ss_dssp BCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGG
T ss_pred cCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHH
Confidence 67777777 899999999998532221 1 1
Q ss_pred cc----CCCe---EEEeccccccccCCCceEEEEEE--cChhHHHHHHHHHHhc----CCCCChHHHHHHHhchhh----
Q 019543 140 LE----LGAD---IVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQNAE----GSGLAPFDCWICLRGVKT---- 202 (339)
Q Consensus 140 ~~----~~~D---i~~~S~sK~l~g~~~~~gG~v~~--~~~~l~~~l~~~~~~~----~~~~~~~~a~~~~~~l~~---- 202 (339)
.. ...| ++++|+||.++.+|.. .|++++ +++++++.+....... ....+.....++...++.
T Consensus 242 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 320 (418)
T 3rq1_A 242 FNKFSHLPKEILTCVCYSLSKGFTMYGQR-VGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKF 320 (418)
T ss_dssp GGGGTTCCTTEEEEEEEESTTTTTCCSSC-CEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHH
T ss_pred HHHHHhcCCCceEEEEEeCCCCCcCcCCc-ceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHH
Confidence 11 1123 7889999999877654 567766 2457888777654322 133455544444333322
Q ss_pred ------HHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCCHHHHHHHHccCCcc
Q 019543 203 ------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVETTKYF 275 (339)
Q Consensus 203 ------~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~~~~~~~~~~L~~~ 275 (339)
.....++..++.+++.+.|+.+ ++.. ++ ..++ .+++.+.+ ..+|.+.|.+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~----------------~~~~~~~~~~~~~---~~~~~~~l~~~ 378 (418)
T 3rq1_A 321 KEYEAERNCYYQLIRDRADIFKQEAAQV-GLPM--LP----------------YRGGFFITIPTDS---ANAICEELKKE 378 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCC--CC----------------CCSSSEEEEECTT---HHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCC--CC----------------CCceEEEEcCCCC---HHHHHHHHHhC
Confidence 1233455566777788888765 3321 11 1233 44444543 34566667677
Q ss_pred eeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEecc---CCHHHHHHHHHHHHhcC
Q 019543 276 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRTG 337 (339)
Q Consensus 276 ~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~---e~~~~li~~l~~al~~~ 337 (339)
|+.+..| .+.+|||++. ++.+..++.|.++++++
T Consensus 379 gi~v~~g----------------------------~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 379 HIYVIAL----------------------------ANGIRIAACGIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp TEECEEC----------------------------SSEEEEEGGGSCHHHHTTHHHHHHHHHHHT
T ss_pred CEEEecC----------------------------CCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 7766532 2569999873 33455577777777654
No 150
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.72 E-value=4.4e-17 Score=154.40 Aligned_cols=234 Identities=17% Similarity=0.198 Sum_probs=153.9
Q ss_pred CCchHHHHHHHHHhHh--CCCeEEEcCcHHHHHHHHHH-hc--CCCCEEEEcCCCccchHH-------------------
Q 019543 53 GNPTRDALESLLAKLD--KADRALCFTSGMAALAAVTH-LL--GTGEEIVAGDDLYGGTDR------------------- 108 (339)
Q Consensus 53 ~~~~~~~le~~la~~~--g~~~~l~~~sG~~A~~~il~-ll--~~GD~Vi~~~~~y~~~~~------------------- 108 (339)
..+..+++++++++++ +.+++++++||++|+.+++. +. .+||+|++.++.|++...
T Consensus 85 ~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~ 164 (395)
T 1vef_A 85 PTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLV 164 (395)
T ss_dssp CCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCS
T ss_pred CCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCC
Confidence 4678999999999999 45678889999999986544 32 689999998887754210
Q ss_pred ------------HHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----cc
Q 019543 109 ------------LLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LE 141 (339)
Q Consensus 109 ------------~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~ 141 (339)
.++ ++|.++|++||++||+|++|+ .+..+.. ..
T Consensus 165 ~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~ 244 (395)
T 1vef_A 165 EPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFG 244 (395)
T ss_dssp SCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHT
T ss_pred CCeeEeCCCcHHHHHHHhccCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcC
Confidence 000 889999999999999999998 2222221 12
Q ss_pred CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHH
Q 019543 142 LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAE 219 (339)
Q Consensus 142 ~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~ 219 (339)
...|++ |+||++++ | ...|++++++ ++++.++......+...++..++.+...++.+. ...++..++++++.+
T Consensus 245 ~~~d~~--s~sK~~~~-g-~~~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~ 319 (395)
T 1vef_A 245 IVPDIL--TLAKALGG-G-VPLGVAVMRE-EVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFME 319 (395)
T ss_dssp CCCSEE--EECGGGGT-T-SSCEEEEEEH-HHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCEE--EEcccccC-C-CceEEEEehH-HHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 346866 78999996 4 3456777765 465555431112234567776666665665543 245666778888888
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCC-cceeecccCCcccceeccccccCCC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHAS 298 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~~~h~~ 298 (339)
.|++.+. ..+.. ..+.+.+++|.+.+. ..++.+.|. ..|+.++.+
T Consensus 320 ~l~~~~~-~~~~~---------------~~~~g~~~~~~~~~~--~~~l~~~l~~~~gi~v~~~---------------- 365 (395)
T 1vef_A 320 KLRAIPS-PKIRE---------------VRGMGLMVGLELKEK--AAPYIARLEKEHRVLALQA---------------- 365 (395)
T ss_dssp HHHTSCC-TTEEE---------------EEEETTEEEEEESSC--SHHHHHHHHHHHCEECEES----------------
T ss_pred HHHHhhc-CceEE---------------EEEEEEEEEEEEcCh--HHHHHHHHHHHCCeEEecC----------------
Confidence 8887642 10100 012467889888532 346777776 677766532
Q ss_pred CCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 299 IPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 299 ~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.++.+|||++...+++.++.+.++|++
T Consensus 366 -----------~~~~iRi~~~~~~~~~~i~~~~~~l~~ 392 (395)
T 1vef_A 366 -----------GPTVIRFLPPLVIEKEDLERVVEAVRA 392 (395)
T ss_dssp -----------STTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred -----------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 136799999877766666666666653
No 151
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.72 E-value=4.2e-16 Score=148.16 Aligned_cols=209 Identities=14% Similarity=0.067 Sum_probs=134.3
Q ss_pred chHHHHHHHHHhH--hC---CCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH------------------
Q 019543 55 PTRDALESLLAKL--DK---ADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 55 ~~~~~le~~la~~--~g---~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
+...+|++.++++ .| .+++++++++++|+.+++.+++|||+|+++++.|++....+.
T Consensus 75 ~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 154 (400)
T 3asa_A 75 FGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRLLSFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAF 154 (400)
T ss_dssp TCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHHHHHHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTT
T ss_pred CCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHHHHHcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCc
Confidence 3567899999998 46 346777777789988766777999999999998876553322
Q ss_pred -------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-c----CcccC----CCeEEEecc
Q 019543 112 -------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-S----RPLEL----GADIVMHSA 151 (339)
Q Consensus 112 -------------------------------~~I~~la~~~g~~livD~a~a~g~~-~----~~~~~----~~Di~~~S~ 151 (339)
++|+++|++||+++|+|++|+.... . ..... ..++++.|+
T Consensus 155 ~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 234 (400)
T 3asa_A 155 FPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSF 234 (400)
T ss_dssp CCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEEC
T ss_pred ccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecc
Confidence 6899999999999999999973221 1 11122 235899999
Q ss_pred ccccccCCCceEEEEEEcChhH-------HHHHHHHHH-hcCCCCChHHHHHHHhchhh--HHHHHHHHHHHHHHHHHHH
Q 019543 152 TKFIAGHSDVMAGVLAVKGERL-------AKELYFLQN-AEGSGLAPFDCWICLRGVKT--MALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 152 sK~l~g~~~~~gG~v~~~~~~l-------~~~l~~~~~-~~~~~~~~~~a~~~~~~l~~--~~~r~~~~~~~a~~l~~~L 221 (339)
||++|.+|. ..|++++++ ++ ++.+..... ....+.++.....+...|+. ++...++..++.+++.+.|
T Consensus 235 sK~~g~~Gl-riG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L 312 (400)
T 3asa_A 235 SKPLGFAGI-RLGWTVIPQ-ELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKAL 312 (400)
T ss_dssp CGGGTTTTC-CCEEEECCT-TCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCcch-heeEEeeCh-hhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999986653 457887775 45 455543222 22223455444433333332 3445566667788888888
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEe-eCCHHHHHHHHccCC-cceeecccCC
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-TGSLALSKHVVETTK-YFSITVSFGS 283 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~-~~~~~~~~~~~~~L~-~~~i~v~~G~ 283 (339)
++. +++. ..| ..+.++++. +++.....++++.|. ..|+.++.|.
T Consensus 313 ~~~-g~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~~g~ 358 (400)
T 3asa_A 313 LAT-GFEV-FGG----------------EHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGI 358 (400)
T ss_dssp HHT-TCEE-EEC----------------SSSSEEEEECCCTTCCTTTHHHHHHHHHSEECEEGG
T ss_pred HHC-CCee-eCC----------------CCceEEEEeccCCCCCHHHHHHHHHHhCCEEEeChh
Confidence 876 4532 212 135678888 653222234555553 4588877664
No 152
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.72 E-value=1.8e-16 Score=150.64 Aligned_cols=247 Identities=14% Similarity=0.090 Sum_probs=150.0
Q ss_pred HHHHHHHHHhHhC-------CC-eEEEcCcHHHHHHHHH-HhcCCCC----EEEEcCCCccchHHHHH------------
Q 019543 57 RDALESLLAKLDK-------AD-RALCFTSGMAALAAVT-HLLGTGE----EIVAGDDLYGGTDRLLS------------ 111 (339)
Q Consensus 57 ~~~le~~la~~~g-------~~-~~l~~~sG~~A~~~il-~ll~~GD----~Vi~~~~~y~~~~~~~~------------ 111 (339)
..+|++.+|++++ .+ ++++++++++|+..++ .+++||| +|++++|.|......++
T Consensus 70 ~~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d 149 (391)
T 3bwn_A 70 EPELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGD 149 (391)
T ss_dssp CHHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCC
Confidence 4789999999887 33 5666666688988654 5789999 99999999998776554
Q ss_pred -------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcc--cCCCeEEEeccccccccCCCceEE
Q 019543 112 -------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPL--ELGADIVMHSATKFIAGHSDVMAG 164 (339)
Q Consensus 112 -------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~--~~~~Di~~~S~sK~l~g~~~~~gG 164 (339)
.+|++.++.++++||+|++|..+.. .++ ..+.+|+++||||.++.+|.+ .|
T Consensus 150 ~~~l~~~~~k~v~l~~p~NPtG~~~~~l~~~~~~~~~~ii~De~y~~~~~-~~l~~~~~~~i~~~S~SK~~g~~GlR-iG 227 (391)
T 3bwn_A 150 AWGFDKKGPYIELVTSPNNPDGTIRETVVNRPDDDEAKVIHDFAYYWPHY-TPITRRQDHDIMLFTFSKITGHAGSR-IG 227 (391)
T ss_dssp STTCCCCSCEEEEEESSCTTTCCCCCCCC-----CCCEEEEECTTCSTTT-SCCCCCBCCSEEEEEHHHHHSCGGGC-EE
T ss_pred HHHcCCCCCEEEEECCCCCCCchhHHHHHHHhhcCCCEEEEeCCCCCCCC-CccccCCCCeEEEEechhhcCCCccc-eE
Confidence 4454422233399999999975321 122 234579999999999877644 56
Q ss_pred EEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchh--------------hHHHHHHHHHHHHHHHHHHHhCCCCceEE
Q 019543 165 VLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK--------------TMALRVEKQQDNAQKIAEFLASHPRVKKV 230 (339)
Q Consensus 165 ~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~--------------~~~~r~~~~~~~a~~l~~~L~~~~~i~~v 230 (339)
++++.++++++.+...+.......+.....++...|+ .+...++...++.+++.+.|+++++++..
T Consensus 228 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 307 (391)
T 3bwn_A 228 WALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLP 307 (391)
T ss_dssp EEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECC
T ss_pred EEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 7776445788888877654444556554443333333 24445666678888899999988765321
Q ss_pred ecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCC
Q 019543 231 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 310 (339)
Q Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~ 310 (339)
.|. .+ ............|..+++.+.+.+ .+.+.|+..|+.++.|..+. ..
T Consensus 308 -~p~-~~--~~~f~~~~~~~~g~~~~~~~~~~~---~~~~~l~~~gV~v~pg~~fg----------------------~~ 358 (391)
T 3bwn_A 308 -KYP-EA--FCNYFGKSLESYPAFAWLGTKEET---DLVSELRRHKVMSRAGERCG----------------------SD 358 (391)
T ss_dssp -CCC-CE--EETTTTEEECCCCSEEEEEESSSC---CHHHHHHHTTEECEEGGGGT----------------------CC
T ss_pred -cCC-cc--ccccccccCCCcceEEEecCCcHH---HHHHHHHHCCEEEccCCCCC----------------------CC
Confidence 121 00 000000000112346777775422 23334455688877664321 12
Q ss_pred CCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 311 EDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 311 ~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
++.+|||++. .++.++.+.++|++
T Consensus 359 ~~~iRis~~~--~~e~i~~~~~~L~~ 382 (391)
T 3bwn_A 359 KKHVRVSMLS--REDVFNVFLERLAN 382 (391)
T ss_dssp TTEEEEESCS--CHHHHHHHHHHHHS
T ss_pred CCEEEEEecC--CHHHHHHHHHHHHH
Confidence 4789999995 34445555555543
No 153
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.71 E-value=1.2e-16 Score=155.08 Aligned_cols=236 Identities=11% Similarity=0.083 Sum_probs=147.1
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCCCE---EEEcCCCccchHH----H---------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTGEE---IVAGDDLYGGTDR----L--------------- 109 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~GD~---Vi~~~~~y~~~~~----~--------------- 109 (339)
+..+++++++++++|++ ++++++|+++++.+++ ++++|||. |+++++.|++... .
T Consensus 111 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~ 190 (465)
T 3e9k_A 111 TGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMI 190 (465)
T ss_dssp GTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEE
T ss_pred HhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEE
Confidence 45688999999999975 6777888899998654 47666554 9999998865221 0
Q ss_pred -----------------H----H--------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc-ccCCCeEE
Q 019543 110 -----------------L----S--------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP-LELGADIV 147 (339)
Q Consensus 110 -----------------~----~--------------------~~I~~la~~~g~~livD~a~a~g~~~~~-~~~~~Di~ 147 (339)
+ . ++|.++|++||+++++|++|+.|...-. ...++|++
T Consensus 191 ~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~ 270 (465)
T 3e9k_A 191 KPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFA 270 (465)
T ss_dssp CCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEE
T ss_pred ecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEE
Confidence 1 0 9999999999999999999998865322 24678999
Q ss_pred Eeccccccc-cCCCceEEEEEEcChhHHHHHHHH----------HHh---------------cCCCCChHHHHHHHhchh
Q 019543 148 MHSATKFIA-GHSDVMAGVLAVKGERLAKELYFL----------QNA---------------EGSGLAPFDCWICLRGVK 201 (339)
Q Consensus 148 ~~S~sK~l~-g~~~~~gG~v~~~~~~l~~~l~~~----------~~~---------------~~~~~~~~~a~~~~~~l~ 201 (339)
++|++|+++ |++ .. |++++++ ++.+.+... ..+ .....+....+.+..+++
T Consensus 271 ~~s~~K~l~~gp~-~~-g~l~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~ 347 (465)
T 3e9k_A 271 CWCSYKYLNAGAG-GI-AGAFIHE-KHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLE 347 (465)
T ss_dssp EECSSSTTCCCTT-CC-CEEEECG-GGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHH
T ss_pred EECcccccccCCC-ce-EEEEEcH-HHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHH
Confidence 999999995 443 23 4566654 454333210 000 011333333333333333
Q ss_pred h-----HHHHHHHHHHHHHHHHHHHhCC----------CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHH
Q 019543 202 T-----MALRVEKQQDNAQKIAEFLASH----------PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSK 266 (339)
Q Consensus 202 ~-----~~~r~~~~~~~a~~l~~~L~~~----------~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~ 266 (339)
. ++...++..++++++.+.|+++ ++++. ..|. .+ ...+++++|.+.. ...
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~-~~p~---~~---------~~~g~~~~~~~~~--~~~ 412 (465)
T 3e9k_A 348 IFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNI-ITPS---HV---------EERGCQLTITFSV--PNK 412 (465)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEE-CSCS---SG---------GGBCSCEEEEECC--TTC
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEE-eCCC---CH---------hhcccEEEEEecC--CHH
Confidence 2 3555666677788888888764 55532 2221 01 1247889998752 233
Q ss_pred HHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe-ccCCHHHHHHHHHHHHh
Q 019543 267 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-GIEDVNDLISDLDKALR 335 (339)
Q Consensus 267 ~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv-g~e~~~~li~~l~~al~ 335 (339)
++.+.|...|+.++++ .++.||||+ ++.++++.++.+.++|+
T Consensus 413 ~l~~~L~~~Gi~v~~~---------------------------~~~~iRis~~~~~~t~edi~~~~~~l~ 455 (465)
T 3e9k_A 413 DVFQELEKRGVVCDKR---------------------------NPNGIRVAPVPLYNSFHDVYKFTNLLT 455 (465)
T ss_dssp CHHHHHHTTTEECEEE---------------------------TTTEEEEBCCTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEecC---------------------------CCCEEEEeCcccCCCHHHHHHHHHHHH
Confidence 4566666667766511 237899998 55555554555544443
No 154
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.71 E-value=4.9e-16 Score=144.10 Aligned_cols=224 Identities=8% Similarity=0.070 Sum_probs=153.9
Q ss_pred chHHHHHHHHHhHhC---C--CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHH------------------
Q 019543 55 PTRDALESLLAKLDK---A--DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLS------------------ 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g---~--~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~------------------ 111 (339)
+...++++.++++++ . ++++++++|++|+..++..+ ||+|+++ +.|++....++
T Consensus 56 ~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~--gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d 132 (335)
T 1uu1_A 56 SPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF--DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIP 132 (335)
T ss_dssp SSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS--SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCC
T ss_pred CchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh--CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCC
Confidence 347899999999998 3 46777788899998766655 9999999 99987654432
Q ss_pred -------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc---c-cCCCeEEEeccccccccCCCce
Q 019543 112 -------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP---L-ELGADIVMHSATKFIAGHSDVM 162 (339)
Q Consensus 112 -------------------------~~I~~la~~~g~~livD~a~a~g~~~~~---~-~~~~Di~~~S~sK~l~g~~~~~ 162 (339)
++|.++++.+| ++|+|++|+....... . ..+.+++++|+||+++.+| ..
T Consensus 133 ~~~l~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G-~r 210 (335)
T 1uu1_A 133 EVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAA-QR 210 (335)
T ss_dssp CCCCCTTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGG-GC
T ss_pred HHHcCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcc-cC
Confidence 78888888889 9999999973211111 1 2345799999999998555 44
Q ss_pred EEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCC
Q 019543 163 AGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 239 (339)
Q Consensus 163 gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~ 239 (339)
.|+++++ +++.+.++.... ....++...+.+...|+. ++.+.++..++.+++.+.|+++ ++. + +|.
T Consensus 211 ~G~~~~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~----- 279 (335)
T 1uu1_A 211 VGYVVAS-EKFIDAYNRVRL--PFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYR-I-TDS----- 279 (335)
T ss_dssp CEEEEEC-HHHHHHHHHHSC--TTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCC-----
T ss_pred eEEEEeC-HHHHHHHHHhcC--CCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CcE-E-cCC-----
Confidence 6788875 467777765432 235566655554444443 4556667778888888888876 442 1 231
Q ss_pred chHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEec
Q 019543 240 GHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG 319 (339)
Q Consensus 240 ~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg 319 (339)
.+..+++.+.+ ....++.+.|...|+.++. .++.+|||++
T Consensus 280 -----------~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~----------------------------~~~~iRis~~ 319 (335)
T 1uu1_A 280 -----------RGNFVFVFMEK-EEKERLLEHLRTKNVAVRS----------------------------FREGVRITIG 319 (335)
T ss_dssp -----------CSSEEEEECCT-HHHHHHHHHHHHHTEEEEE----------------------------ETTEEEEECC
T ss_pred -----------CCeEEEEECCC-CCHHHHHHHHHHCCEEEEE----------------------------CCCeEEEEeC
Confidence 35678888865 3456777777777776542 1257999997
Q ss_pred cCCHHHHHHHHHHHHhcC
Q 019543 320 IEDVNDLISDLDKALRTG 337 (339)
Q Consensus 320 ~e~~~~li~~l~~al~~~ 337 (339)
.+ +.++.+.++|+++
T Consensus 320 ~~---~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 320 KR---EENDMILRELEVF 334 (335)
T ss_dssp CH---HHHHHHHHHHHCC
T ss_pred CH---HHHHHHHHHHHhh
Confidence 52 3477787777653
No 155
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.70 E-value=2.2e-16 Score=147.75 Aligned_cols=235 Identities=13% Similarity=0.056 Sum_probs=147.8
Q ss_pred chHHHHHHHHHhHhCCC---eEEEc-CcHHHHHHHH-HHhcCCCCEEEEcCCCccchH--HHHH----------------
Q 019543 55 PTRDALESLLAKLDKAD---RALCF-TSGMAALAAV-THLLGTGEEIVAGDDLYGGTD--RLLS---------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~-~sG~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~--~~~~---------------- 111 (339)
+.++++++++++++|.+ +++++ +||++|+.++ .++++|||+|++.++.+.+.. ...+
T Consensus 49 ~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 128 (362)
T 2c0r_A 49 AVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNY 128 (362)
T ss_dssp HHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhCCeEEEeccccccc
Confidence 35789999999999976 45555 6779999864 458899999987654322211 1000
Q ss_pred -------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCC
Q 019543 112 -------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSD 160 (339)
Q Consensus 112 -------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~ 160 (339)
..|.++ ||+++++|++|+.+...-.+. ..|++++|+||+++..|
T Consensus 129 ~~~~~~~~~~i~~~t~~v~~~~~~n~tG~~~~~l~~i---~~~~vivD~a~~~~~~~~~~~-~~d~~~~s~~K~~g~~G- 203 (362)
T 2c0r_A 129 MTLPKLQEIQLQDNAAYLHLTSNETIEGAQFKAFPDT---GSVPLIGDMSSDILSRPFDLN-QFGLVYAGAQKNLGPSG- 203 (362)
T ss_dssp CSCCCGGGCCCCTTEEEEEEESEETTTTEECSSCCCC---TTSCEEEECTTTTTSSCCCGG-GCSEEEEETTTTTCCSS-
T ss_pred ccCCCHHHcccCCCcCEEEEeCCcCccceeccccccc---CCCEEEEEChhhccCCccchh-HCcEEEEeccccccCcC-
Confidence 222233 899999999998875422222 23999999999997443
Q ss_pred ceEEEEEEcChhHHHHHHHH------------HHhcCCCCChHHHHHHHhchh------hHHHHHHHHHHHHHHHHHHHh
Q 019543 161 VMAGVLAVKGERLAKELYFL------------QNAEGSGLAPFDCWICLRGVK------TMALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~------------~~~~~~~~~~~~a~~~~~~l~------~~~~r~~~~~~~a~~l~~~L~ 222 (339)
.|++++++ ++++.++.. ......+.+....+.+..+++ .++.+.++.+++++++.+.|+
T Consensus 204 --~G~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 280 (362)
T 2c0r_A 204 --VTVVIVRE-DLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAID 280 (362)
T ss_dssp --CEEEEEEG-GGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred --cEEEEEcH-HHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 47888875 454443220 001223445443333333333 246667778888999999999
Q ss_pred CCCCc-eEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCH
Q 019543 223 SHPRV-KKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 301 (339)
Q Consensus 223 ~~~~i-~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~ 301 (339)
+++++ ... .+ +. ...+++++|.+++.....+|++.|...|+.+..|. +
T Consensus 281 ~~~~~~~~~-~~-----~~--------~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~~~~g~-------~---------- 329 (362)
T 2c0r_A 281 QSGGFYRGC-VD-----VD--------SRSDMNITFRLASEELEKEFVKASEQEGFVGLKGH-------R---------- 329 (362)
T ss_dssp TSTTSSEES-SC-----GG--------GBCSSEEEEECSCHHHHHHHHHHHHHTTEESCBCC-------T----------
T ss_pred HcCCccccC-CC-----hH--------HcCCcEEEEEcCCcchHHHHHHHHHHCCCeeccCC-------C----------
Confidence 87633 321 11 10 01346788888655556788888877788665331 1
Q ss_pred HHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 302 EVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 302 ~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+.||||++..++++.++.+.++|++
T Consensus 330 --------~~~~iRis~~~~~~~e~i~~l~~~l~~ 356 (362)
T 2c0r_A 330 --------SVGGLRASIYNAVPYESCEALVQFMEH 356 (362)
T ss_dssp --------TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred --------CCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 124599999976666667777777654
No 156
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.70 E-value=2.2e-16 Score=152.02 Aligned_cols=211 Identities=13% Similarity=0.047 Sum_probs=132.2
Q ss_pred chHHHHHHHHHhHh--------CCCeEEEcCcHHHHHHHHH-HhcCCCC--------------EEEEc-CCCccchH---
Q 019543 55 PTRDALESLLAKLD--------KADRALCFTSGMAALAAVT-HLLGTGE--------------EIVAG-DDLYGGTD--- 107 (339)
Q Consensus 55 ~~~~~le~~la~~~--------g~~~~l~~~sG~~A~~~il-~ll~~GD--------------~Vi~~-~~~y~~~~--- 107 (339)
....+|++.+|+++ ..++++++++|++|+.+++ .++++|| +|+++ ++.|.+..
T Consensus 83 ~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~ 162 (444)
T 3if2_A 83 QGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVH 162 (444)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCC
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcc
Confidence 34677888888876 3467889999999998654 5788998 78775 44443211
Q ss_pred -------------------------------H----H---HH------------------------HHHHHHHHHcCCEE
Q 019543 108 -------------------------------R----L---LS------------------------RKIAEMAHAHGALL 125 (339)
Q Consensus 108 -------------------------------~----~---~~------------------------~~I~~la~~~g~~l 125 (339)
. . +. ++|+++|++||+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~l 242 (444)
T 3if2_A 163 VEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPL 242 (444)
T ss_dssp SSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCE
T ss_pred cccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEE
Confidence 0 1 11 88999999999999
Q ss_pred EEeCCcCCCCCc---Cc---ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhc
Q 019543 126 LVDNSIMSPVLS---RP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 199 (339)
Q Consensus 126 ivD~a~a~g~~~---~~---~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~ 199 (339)
|+|++|+.+... .. ...+.+++++|+||. +++| ...|+++++ +++.+.+.......+...++...+++...
T Consensus 243 i~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G-~r~G~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~a~~~~ 319 (444)
T 3if2_A 243 IIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-GLPG-MRTGIIVAD-AKVIEAVSAMNAVVNLAPTRFGAAIATPL 319 (444)
T ss_dssp EEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-TCGG-GCCEEEECC-HHHHHHHHHHHHHHHSSCCCHHHHHHHHH
T ss_pred EEECCCCCcccccccccccccCCCCEEEEechhhc-cCCC-CceEEEEEC-HHHHHHHHHHHHhccCCCChHHHHHHHHH
Confidence 999999753221 11 123568999999997 5444 456788776 47888887766555545555544433332
Q ss_pred hhh------HHH-HHHHHHHHHHHHHHHHhC-CCCce-EEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-HHHHHHHH
Q 019543 200 VKT------MAL-RVEKQQDNAQKIAEFLAS-HPRVK-KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVV 269 (339)
Q Consensus 200 l~~------~~~-r~~~~~~~a~~l~~~L~~-~~~i~-~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~~~~~~~~ 269 (339)
++. ... ..+...++.+.+.+.|++ ++.+. .+..| ..+.++++.+.. .....+++
T Consensus 320 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~l~ 383 (444)
T 3if2_A 320 VANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKP----------------EGAIFLWLWFKDLPISTLDLY 383 (444)
T ss_dssp HHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECC----------------CBSSEEEEEETTCSSCHHHHH
T ss_pred HHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecC----------------CccEEEEEEcCCCCCCHHHHH
Confidence 222 111 233445556666666654 34332 12222 135677777753 23355677
Q ss_pred ccCCcceeecccCCc
Q 019543 270 ETTKYFSITVSFGSV 284 (339)
Q Consensus 270 ~~L~~~~i~v~~G~~ 284 (339)
+.|...|+.++.|..
T Consensus 384 ~~l~~~gi~v~~g~~ 398 (444)
T 3if2_A 384 ERLKAKGTLIVPSEY 398 (444)
T ss_dssp HHHHHTTEECEEGGG
T ss_pred HHHHHCCeEEecchh
Confidence 778778998887653
No 157
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.70 E-value=4.4e-17 Score=154.62 Aligned_cols=235 Identities=16% Similarity=0.161 Sum_probs=147.0
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHH-hcC------C-CCEEEEcCCCccchHH----------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLG------T-GEEIVAGDDLYGGTDR---------------- 108 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~-ll~------~-GD~Vi~~~~~y~~~~~---------------- 108 (339)
..+..+++++++++++|.+++++++||++|+.+++. +.. + +|+|++.++.|++...
T Consensus 80 ~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~ 159 (397)
T 2ord_A 80 WNRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFE 159 (397)
T ss_dssp EEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGC
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccC
Confidence 357889999999999999999999999999986554 332 5 4788888887754211
Q ss_pred ---------------HHH-----------------------------HHHHHHHHHcCCEEEEeCCcC-CCCCcCcc---
Q 019543 109 ---------------LLS-----------------------------RKIAEMAHAHGALLLVDNSIM-SPVLSRPL--- 140 (339)
Q Consensus 109 ---------------~~~-----------------------------~~I~~la~~~g~~livD~a~a-~g~~~~~~--- 140 (339)
.++ ++|.++|++||+++|+|++|+ .+..+.+.
T Consensus 160 p~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~ 239 (397)
T 2ord_A 160 PLVPGFEYFEFNNVEDLRRKMSEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQ 239 (397)
T ss_dssp SCCTTEEEECTTCHHHHHHHCCTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHH
T ss_pred CCCCCeeEecCCCHHHHHHHhhcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhh
Confidence 000 889999999999999999996 22112221
Q ss_pred --cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH--HHHHHHHHHHHHH
Q 019543 141 --ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQK 216 (339)
Q Consensus 141 --~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~--~~r~~~~~~~a~~ 216 (339)
....|++ |+||++++ | ...|++++++ ++. .++......+...++..++.+...|+.+ +...++.+++.++
T Consensus 240 ~~~~~~d~~--s~sK~~~~-G-~r~G~~~~~~-~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 313 (397)
T 2ord_A 240 KYGVVPDVL--TTAKGLGG-G-VPIGAVIVNE-RAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGNY 313 (397)
T ss_dssp HHTCCCSEE--EECGGGGT-T-SCCEEEEECS-TTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHH
T ss_pred hhCCCCCee--eeccccCC-C-cCeEEEEEch-Hhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 1235765 77999994 3 3456777776 454 4432111223456777666666555544 2345666677778
Q ss_pred HHHHHhCCC-CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceecccccc
Q 019543 217 IAEFLASHP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS 295 (339)
Q Consensus 217 l~~~L~~~~-~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~ 295 (339)
+.+.|++.+ ++..+.. ..+.+.+++|.+.+.....++.+.|...|+.++.|
T Consensus 314 l~~~L~~~~~~~~~~~~---------------~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~------------- 365 (397)
T 2ord_A 314 LMKKLQEMKEEYDVVAD---------------VRGMGLMIGIQFREEVSNREVATKCFENKLLVVPA------------- 365 (397)
T ss_dssp HHHHHHHHHHHCTTEEE---------------EEEETTEEEEEECTTSCHHHHHHHHHHTTEECEEE-------------
T ss_pred HHHHHHHHHHhCCceEE---------------EEEEeEEEEEEECChHHHHHHHHHHHHCCCEEccC-------------
Confidence 877776531 1100000 01246788888864323556777776667765532
Q ss_pred CCCCCHHHHHhCCCCCCeEEEEeccCCHH----HHHHHHHHHHh
Q 019543 296 HASIPVEVRQARGLTEDLVRISVGIEDVN----DLISDLDKALR 335 (339)
Q Consensus 296 h~~~~~~~~~~~g~~~~~lRisvg~e~~~----~li~~l~~al~ 335 (339)
.++.+|||++...++ ++++.|.++++
T Consensus 366 --------------~~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 366 --------------GNNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp --------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred --------------CCCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 136799997654444 44445555444
No 158
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.69 E-value=3.7e-16 Score=150.36 Aligned_cols=239 Identities=15% Similarity=0.121 Sum_probs=151.3
Q ss_pred CcccCCCCchHHHHHHHHHhHh--CC-CeEEEcCcHHHHHHHHHHh---cCCCCEEEEcCCCccch--------------
Q 019543 47 YDYTRSGNPTRDALESLLAKLD--KA-DRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGT-------------- 106 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~--g~-~~~l~~~sG~~A~~~il~l---l~~GD~Vi~~~~~y~~~-------------- 106 (339)
|.+.++.++..++|++++++++ +. +++++++||++|+..++.+ ..+++.|++.++.|++.
T Consensus 78 ~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 157 (439)
T 3dxv_A 78 ATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQA 157 (439)
T ss_dssp SCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchh
Confidence 3445556688999999999998 55 6899999999999854432 34667777766655321
Q ss_pred -----------------------------H----HHH----H-------------------------HHHHHHHHHcCCE
Q 019543 107 -----------------------------D----RLL----S-------------------------RKIAEMAHAHGAL 124 (339)
Q Consensus 107 -----------------------------~----~~~----~-------------------------~~I~~la~~~g~~ 124 (339)
. ..+ . ++|.++|++||++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 237 (439)
T 3dxv_A 158 DAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGIL 237 (439)
T ss_dssp ------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCE
T ss_pred hccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 1 122 1 8999999999999
Q ss_pred EEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHh
Q 019543 125 LLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 198 (339)
Q Consensus 125 livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~ 198 (339)
||+||+|+ .+..+.. .....|++ |+||++++ |. ..|++++++ ++++.+.......+. .+++..+.++.
T Consensus 238 li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G~-riG~~~~~~-~~~~~~~~~~~~~t~-~~~~~~~aa~a 311 (439)
T 3dxv_A 238 VVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGLGG-GL-PLSAVIAPA-EILDCASAFAMQTLH-GNPISAAAGLA 311 (439)
T ss_dssp EEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGGGT-TS-CCEEEEEEH-HHHTSCSSSSCCTTT-TCHHHHHHHHH
T ss_pred EEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchhcC-Cc-ceEEEEECH-HHHhhhcCCCcCCCc-ccHHHHHHHHH
Confidence 99999996 2222211 12234665 88999995 44 567888764 566655433212334 67777666666
Q ss_pred chhhH--HHHHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEee--------CCHHH
Q 019543 199 GVKTM--ALRVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT--------GSLAL 264 (339)
Q Consensus 199 ~l~~~--~~r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~--------~~~~~ 264 (339)
.++.+ +...++.+++.+++.+.|++ ++.+..+ .+.|.++++.+ ++...
T Consensus 312 al~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~ 373 (439)
T 3dxv_A 312 VLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDI------------------RGRGLACGMELVCDRQSREPARAE 373 (439)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEEEEETTTTEECHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EEEEEEEEEEEecCccccCCCHHH
Confidence 66543 23355556666666666654 3433221 12567888876 34555
Q ss_pred HHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 265 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 265 ~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
+.++.+.|...|+.+..|+ ...+.+||++++..+++.++.+.++|
T Consensus 374 ~~~~~~~l~~~Gv~v~~~~-------------------------~~~~~iRi~~~~~~t~e~i~~~l~~l 418 (439)
T 3dxv_A 374 TAKLIYRAYQLGLVVYYVG-------------------------MNGNVLEFTPPLTITETDIHKALDLL 418 (439)
T ss_dssp HHHHHHHHHHHTEECEEES-------------------------TTSCEEEECCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEeecC-------------------------CCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 6778888877777665432 12368999987765554444444443
No 159
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.69 E-value=2.7e-15 Score=139.47 Aligned_cols=232 Identities=14% Similarity=0.106 Sum_probs=152.5
Q ss_pred CCchHHHHHHHHHhHhCCCe-EEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccc------hH-----------------
Q 019543 53 GNPTRDALESLLAKLDKADR-ALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGG------TD----------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~-~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~------~~----------------- 107 (339)
..+..+++++++++++|.+. +++++||++|+.+++ .+++|||+|+++++.|.. ..
T Consensus 41 ~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 120 (356)
T 1v72_A 41 TDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAK 120 (356)
T ss_dssp CSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGC
T ss_pred cchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCCCCe
Confidence 46788999999999999665 578899999997644 477899999998874321 10
Q ss_pred -------H-HH---------H---------------------HHHHHHHHHcCCEEEEeCCcCCC------CCcCcc--c
Q 019543 108 -------R-LL---------S---------------------RKIAEMAHAHGALLLVDNSIMSP------VLSRPL--E 141 (339)
Q Consensus 108 -------~-~~---------~---------------------~~I~~la~~~g~~livD~a~a~g------~~~~~~--~ 141 (339)
. .+ + ++|.++|++||+++++|++|+.+ ...... .
T Consensus 121 ~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 200 (356)
T 1v72_A 121 LDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWK 200 (356)
T ss_dssp CCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGG
T ss_pred EcHHHHHHHhhhcchhhccCCceEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhh
Confidence 1 11 2 88999999999999999998632 111111 1
Q ss_pred CCCeEEEeccccccccCCCceE-EEEEEcChhHHHHHHHHHHhcCCCCC-h-HHHHHHHhchhh--HHHHHHHHHHHHHH
Q 019543 142 LGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFLQNAEGSGLA-P-FDCWICLRGVKT--MALRVEKQQDNAQK 216 (339)
Q Consensus 142 ~~~Di~~~S~sK~l~g~~~~~g-G~v~~~~~~l~~~l~~~~~~~~~~~~-~-~~a~~~~~~l~~--~~~r~~~~~~~a~~ 216 (339)
.+.|+++.|+||+ ++ ..| |+++++ +++.+.++..+...+...+ . ..+......++. +....++..++.++
T Consensus 201 ~~~d~~~~s~sK~-g~---~~G~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 275 (356)
T 1v72_A 201 AGVDALSFGATKN-GV---LAAEAIVLFN-TSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQR 275 (356)
T ss_dssp GTCCEEEECCGGG-TC---SSCEEEEESS-GGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHH
T ss_pred hcCCEEEEecccC-CC---cCccEEEEEC-HHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 3678999999999 43 345 688775 4777777665443343222 2 222112222322 33456667788899
Q ss_pred HHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccC
Q 019543 217 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH 296 (339)
Q Consensus 217 l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h 296 (339)
+.+.|+++++++.+ .|. .+.++++.+.+ ++.+.|...|+.++.|.+
T Consensus 276 l~~~L~~~~g~~~~-~~~----------------~~~~~~~~~~~-----~~~~~l~~~gi~v~~g~~------------ 321 (356)
T 1v72_A 276 LAQGLEGLGGVEVL-GGT----------------EANILFCRLDS-----AMIDALLKAGFGFYHDRW------------ 321 (356)
T ss_dssp HHHHHTTCTTEEEE-SCC----------------CSSEEEEEECH-----HHHHHHHHTTCBCBCSSS------------
T ss_pred HHHHHhhCCCcEEc-cCC----------------CccEEEEEcCH-----HHHHHHHhcCeEEecccc------------
Confidence 99999888777533 331 35677777742 566666666776664420
Q ss_pred CCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 297 ASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 297 ~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.++.+|++++...+++.++.+.++|++
T Consensus 322 -------------~~~~iRi~~~~~~~~~~i~~~~~~l~~ 348 (356)
T 1v72_A 322 -------------GPNVVRFVTSFATTAEDVDHLLNQVRL 348 (356)
T ss_dssp -------------STTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred -------------CCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 136799999877666666666666654
No 160
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.69 E-value=6e-16 Score=147.31 Aligned_cols=235 Identities=16% Similarity=0.122 Sum_probs=144.7
Q ss_pred CchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHH-HHHhc------CCCCE-EEEcCCCccchHH----H----------
Q 019543 54 NPTRDALESLLAKLDKAD--RALCFTSGMAALAA-VTHLL------GTGEE-IVAGDDLYGGTDR----L---------- 109 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~-il~ll------~~GD~-Vi~~~~~y~~~~~----~---------- 109 (339)
.+..+++++++++++|.+ ++++++||++|+.+ +..++ +|||+ |++++..|+.+.. +
T Consensus 70 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~ 149 (416)
T 1qz9_A 70 RDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTL 149 (416)
T ss_dssp GGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceE
Confidence 367789999999999975 67777788888864 43444 89997 5555555553211 0
Q ss_pred --------HH-------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcc-cCCCeEEEecccccc
Q 019543 110 --------LS-------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPL-ELGADIVMHSATKFI 155 (339)
Q Consensus 110 --------~~-------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~-~~~~Di~~~S~sK~l 155 (339)
++ ++|.++|++||+++|+|++|+.|.....+ ..++|++++|++|++
T Consensus 150 ~~v~~~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l 229 (416)
T 1qz9_A 150 RLVDSPEELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYL 229 (416)
T ss_dssp EEESSGGGHHHHCSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTT
T ss_pred EEeCcHHHHHHHhCCCceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCcccC
Confidence 11 99999999999999999999876542222 346899999999998
Q ss_pred ccCCCceE-EEEEEcChhHHHHHHHHH-----------------------HhcCCCCChHHHHHHHhchh-----hHHHH
Q 019543 156 AGHSDVMA-GVLAVKGERLAKELYFLQ-----------------------NAEGSGLAPFDCWICLRGVK-----TMALR 206 (339)
Q Consensus 156 ~g~~~~~g-G~v~~~~~~l~~~l~~~~-----------------------~~~~~~~~~~~a~~~~~~l~-----~~~~r 206 (339)
+++ ..+ |++++++ ++.+.++... .......++...+.+...++ .++..
T Consensus 230 ~~g--~~~~g~l~~~~-~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~ 306 (416)
T 1qz9_A 230 NGG--PGSQAFVWVSP-QLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASL 306 (416)
T ss_dssp CCC--TTCCCEEEECT-TTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred CCC--CCCeEEEEECH-HHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 532 224 7888875 4544443210 11112334433322222222 24556
Q ss_pred HHHHHHHHHHHHHHHhCC-C--CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCC
Q 019543 207 VEKQQDNAQKIAEFLASH-P--RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGS 283 (339)
Q Consensus 207 ~~~~~~~a~~l~~~L~~~-~--~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~ 283 (339)
.++..++++++.+.|+++ + ++.. ..|. .+ ...+++++|.+.+ ..++.+.|...|+.+..
T Consensus 307 ~~~~~~~~~~l~~~L~~~~~~~g~~~-~~~~---~~---------~~~~~~~~~~~~~---~~~l~~~l~~~gi~~~~-- 368 (416)
T 1qz9_A 307 RRKSLALTDLFIELVEQRCAAHELTL-VTPR---EH---------AKRGSHVSFEHPE---GYAVIQALIDRGVIGDY-- 368 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCEE-CSCS---SG---------GGBCSEEEEECTT---HHHHHHHHHTTTEECEE--
T ss_pred HHHHHHHHHHHHHHHHhhccCCCeEE-eCCC---CH---------HHcCCEEEEecCC---HHHHHHHHHhCCcEecc--
Confidence 777778888888888875 5 5532 2121 00 0135688888865 34566667666765421
Q ss_pred cccceeccccccCCCCCHHHHHhCCCCCCeEEEEec-cCCHHHHHHHHHHHH
Q 019543 284 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-IEDVNDLISDLDKAL 334 (339)
Q Consensus 284 ~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg-~e~~~~li~~l~~al 334 (339)
. .++.+|||++ +..+++.++.+.++|
T Consensus 369 -------~------------------~~~~lRis~~~~~~t~~~i~~~~~~l 395 (416)
T 1qz9_A 369 -------R------------------EPRIMRFGFTPLYTTFTEVWDAVQIL 395 (416)
T ss_dssp -------E------------------TTTEEEEECCTTTCCHHHHHHHHHHH
T ss_pred -------C------------------CCCeEEEeCcccCCCHHHHHHHHHHH
Confidence 0 2468999997 344444444444444
No 161
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.69 E-value=1.1e-15 Score=146.31 Aligned_cols=240 Identities=13% Similarity=0.057 Sum_probs=148.1
Q ss_pred HHHHHHHHHhHhCCC--eEEEcCcHHHHH--HHHHH-hcCC------------CCEEEEcCCCccchHHHHH--------
Q 019543 57 RDALESLLAKLDKAD--RALCFTSGMAAL--AAVTH-LLGT------------GEEIVAGDDLYGGTDRLLS-------- 111 (339)
Q Consensus 57 ~~~le~~la~~~g~~--~~l~~~sG~~A~--~~il~-ll~~------------GD~Vi~~~~~y~~~~~~~~-------- 111 (339)
..+|++.++++++.+ ++++++++++|+ .+++. +..+ ||+|+++++.|.+....++
T Consensus 78 ~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~ 157 (422)
T 3d6k_A 78 IADIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMIN 157 (422)
T ss_dssp CHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEe
Confidence 678999999999864 566666667786 44444 4455 3579999999987654332
Q ss_pred --------------------------------------------HHHHHHHH-HcCCEEEEeCCcCC-CCC--cC---cc
Q 019543 112 --------------------------------------------RKIAEMAH-AHGALLLVDNSIMS-PVL--SR---PL 140 (339)
Q Consensus 112 --------------------------------------------~~I~~la~-~~g~~livD~a~a~-g~~--~~---~~ 140 (339)
++|+++|+ +||+++|+|++|+. +.. .. .+
T Consensus 158 v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 237 (422)
T 3d6k_A 158 VPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNV 237 (422)
T ss_dssp EEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCH
T ss_pred cCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcCh
Confidence 58888898 99999999999974 221 11 11
Q ss_pred --------cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh-------HHH
Q 019543 141 --------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-------MAL 205 (339)
Q Consensus 141 --------~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~-------~~~ 205 (339)
..+.++++.||||+ +++| ...|+++++ +++++.+......++...+++..+.+...|+. +..
T Consensus 238 ~~~~~~~~~~~~~i~~~S~SK~-~~~G-lriG~~~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 314 (422)
T 3d6k_A 238 IEFAQAAGNPNRFWFMSSTSKI-THAG-SGVSFFASS-KENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLK 314 (422)
T ss_dssp HHHHHHTTCTTCEEEEEESTTT-SCTT-SSCEEEECC-HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHH
T ss_pred hhHhhccCCCCcEEEEcChhhh-cCcc-cceEEEEeC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHH
Confidence 12457999999998 5555 456788876 47888888776666666676655544444432 222
Q ss_pred HHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeeccc
Q 019543 206 RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSF 281 (339)
Q Consensus 206 r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~ 281 (339)
..+...++.+++.+.|++ .+++. +..| ..+..+++.+.+. ....+.+.|+..|+.++.
T Consensus 315 ~~~~~~~~~~~l~~~L~~~l~~~~~~~-~~~p----------------~~g~~~~~~~~~~-~~~~~~~~l~~~gV~v~~ 376 (422)
T 3d6k_A 315 HAASLAPKFERVLEILDSRLSEYGVAK-WTSP----------------TGGYFISVDVVPG-TASRVVELAKEAGIALTG 376 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEE-ECCC----------------SBSSCEEEEESTT-CHHHHHHHHHHTTEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCceE-EeCC----------------CcceEEEEECCCC-CHHHHHHHHHHCCeEEEc
Confidence 333444555566666543 33332 2223 1355678887532 234566667778998887
Q ss_pred CC-cccceeccccccCCCCCHHHHHhCCCCCCeEEEEecc---CCHHHHHHHHHHHHh
Q 019543 282 GS-VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALR 335 (339)
Q Consensus 282 G~-~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~---e~~~~li~~l~~al~ 335 (339)
|+ .+.. .+ + -.++.+|||++. ++.++.++.|.++++
T Consensus 377 ~g~~f~~--~~----~------------~~~~~iRis~~~~~~e~i~~~~~~l~~~l~ 416 (422)
T 3d6k_A 377 AGSSFPL--HN----D------------PNNENIRLAPSLPPVAELEVAMDGFATCVL 416 (422)
T ss_dssp TTTTSGG--GC----C------------TTSCEEEECCSSSCHHHHHHHHHHHHHHHH
T ss_pred CccccCC--CC----C------------CCCCeEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 43 2210 00 0 024789999985 233444555555544
No 162
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.69 E-value=1.5e-15 Score=147.06 Aligned_cols=251 Identities=16% Similarity=0.158 Sum_probs=150.2
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH-HHhcC----CCCE---EEEcCCCccchH-----------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAV-THLLG----TGEE---IVAGDDLYGGTD----------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i-l~ll~----~GD~---Vi~~~~~y~~~~----------------- 107 (339)
.++...+|+++++++++.+++++++||++|+.++ ..+++ |||+ |+++.+.|+.+.
T Consensus 74 ~~~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~ 153 (467)
T 1ax4_A 74 GSRNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEK 153 (467)
T ss_dssp SCHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGG
T ss_pred cCccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHhccCCceecccccc
Confidence 4567889999999999999999999999999854 44667 9998 888744322110
Q ss_pred ----------------H----HH------H-----------------------HHHHHHHHHcCCEEEEeCCcCC-----
Q 019543 108 ----------------R----LL------S-----------------------RKIAEMAHAHGALLLVDNSIMS----- 133 (339)
Q Consensus 108 ----------------~----~~------~-----------------------~~I~~la~~~g~~livD~a~a~----- 133 (339)
. .+ + ++|+++|++||++||+|+++..
T Consensus 154 ~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~ 233 (467)
T 1ax4_A 154 AFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYF 233 (467)
T ss_dssp GGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHH
T ss_pred cccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchh
Confidence 0 11 1 7899999999999999998754
Q ss_pred ------CCCcCcc-c------CCCeEEEeccccccccCCCceEEEEEEcCh-hHHHHHHHHHHhcC-----CCCChHHHH
Q 019543 134 ------PVLSRPL-E------LGADIVMHSATKFIAGHSDVMAGVLAVKGE-RLAKELYFLQNAEG-----SGLAPFDCW 194 (339)
Q Consensus 134 ------g~~~~~~-~------~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~-~l~~~l~~~~~~~~-----~~~~~~~a~ 194 (339)
+..+... . ..+|++++|+||+++.+ .||+++++++ ++.+.+......++ ...+.....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (467)
T 1ax4_A 234 IKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLN---IGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMA 310 (467)
T ss_dssp HHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCS---SCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHH
T ss_pred ccccccccCCCchhhhhhhhccccceEEEeccccCCCC---cceEEEeCCHHHHHHHHHhhccccccccccCCccchHHH
Confidence 2222111 1 24789999999999753 4688888755 67777766544221 122222111
Q ss_pred HHHhchhhH--HHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEe-------eCC-HHH
Q 019543 195 ICLRGVKTM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-------TGS-LAL 264 (339)
Q Consensus 195 ~~~~~l~~~--~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~-------~~~-~~~ 264 (339)
.+..+++.. ++++++..++.+++.+.|++ +++..+ .|. .+..+++. +.+ ...
T Consensus 311 a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 372 (467)
T 1ax4_A 311 AMVQGLEEGTEEEYLHYRIGQVKYLGDRLRE-AGIPIQ-YPT----------------GGHAVFVDCKKLVPQIPGDQFP 372 (467)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH-TTCCBC-SSC----------------CSSEEEEESTTTCTTSCGGGCH
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh-CCCCcc-cCC----------------CceEEEEehhhhccccccCCCC
Confidence 111123322 23455555777888888876 444321 221 34566666 321 123
Q ss_pred HHHHHccC-Ccceeeccc-CCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccC-CHHHHHHHHHHHHh
Q 019543 265 SKHVVETT-KYFSITVSF-GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE-DVNDLISDLDKALR 335 (339)
Q Consensus 265 ~~~~~~~L-~~~~i~v~~-G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e-~~~~li~~l~~al~ 335 (339)
..+|++.| +..|+.++. |... ....|... ...+ ...+.||||+... .+++.++.+.++|+
T Consensus 373 ~~~l~~~L~~~~gv~v~~~g~~~-~~~~~~~g--~~~~--------~~~~~iRls~~~~~~t~e~i~~~~~~l~ 435 (467)
T 1ax4_A 373 AQAVINALYLESGVRAVEIGSFL-LGRDPATG--EQKH--------ADMEFMRLTIARRVYTNDHMDYIADALI 435 (467)
T ss_dssp HHHHHHHHHHHHCEECEEESHHH-HCBCTTTC--SBCC--------CSCCEEEEECCTTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCceeeecCccc-cccccccc--cccc--------cccceEEEecccccCCHHHHHHHHHHHH
Confidence 56788888 778888876 4221 00001000 0000 0247899999832 44555555555554
No 163
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.68 E-value=3e-16 Score=154.00 Aligned_cols=245 Identities=15% Similarity=0.132 Sum_probs=152.0
Q ss_pred CCchHHHHHH----HHHhHhCCC-------eEEEcCcHHHHHHH-HHHhcCC--------CC-----EEEEcCCCccchH
Q 019543 53 GNPTRDALES----LLAKLDKAD-------RALCFTSGMAALAA-VTHLLGT--------GE-----EIVAGDDLYGGTD 107 (339)
Q Consensus 53 ~~~~~~~le~----~la~~~g~~-------~~l~~~sG~~A~~~-il~ll~~--------GD-----~Vi~~~~~y~~~~ 107 (339)
..|...++|+ .+++++|.+ ..+++++|++|+.. ++++..+ || +|+++++.|..+.
T Consensus 89 ~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~ 168 (502)
T 3hbx_A 89 EYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWE 168 (502)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHH
T ss_pred cChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHH
Confidence 4555555554 578888876 45568899999874 4444443 77 9999988765443
Q ss_pred HHHH-------------------------------------------------HHHHHHHHHc------CCEEEEeCCcC
Q 019543 108 RLLS-------------------------------------------------RKIAEMAHAH------GALLLVDNSIM 132 (339)
Q Consensus 108 ~~~~-------------------------------------------------~~I~~la~~~------g~~livD~a~a 132 (339)
.... ++|.++|+++ |+++++|+||+
T Consensus 169 ~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~ 248 (502)
T 3hbx_A 169 KFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASG 248 (502)
T ss_dssp HHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTG
T ss_pred HHHHHcCceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCcc
Confidence 3222 9999999999 99999999998
Q ss_pred CCCC---cCcc-----cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-HHhcC---------CCCC---hH
Q 019543 133 SPVL---SRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QNAEG---------SGLA---PF 191 (339)
Q Consensus 133 ~g~~---~~~~-----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~-~~~~~---------~~~~---~~ 191 (339)
.++. .... ..++|++++|++|++.++.+ .|+++++++......... ..+.+ ...+ .+
T Consensus 249 ~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g--~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~ 326 (502)
T 3hbx_A 249 GFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVI 326 (502)
T ss_dssp GGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSS--CEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHH
T ss_pred chhhhhhCcccccccCCCCceEEEECcccccCCCCC--eEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHH
Confidence 5431 1111 13789999999999976643 356666654433111100 01111 1111 12
Q ss_pred HHHHHHh--chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--HHHHH
Q 019543 192 DCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKH 267 (339)
Q Consensus 192 ~a~~~~~--~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--~~~~~ 267 (339)
..+.++. +.+.+..+.++..++++++.+.|+++++++.+.. . ...++++|.+.+. ....+
T Consensus 327 a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~---------------~~~~~v~f~~~~~~~~~~~~ 390 (502)
T 3hbx_A 327 AQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSK-D---------------EGVPLVAFSLKDSSCHTEFE 390 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSC-S---------------SSSSEEEEEESSCSSCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeC-C---------------CCceEEEEEecCCCcCCHHH
Confidence 2333333 3455678888999999999999999987764432 0 1357899987432 23446
Q ss_pred HHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCC----HHHHHHHHHHHHh
Q 019543 268 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED----VNDLISDLDKALR 335 (339)
Q Consensus 268 ~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~----~~~li~~l~~al~ 335 (339)
+.+.|...|+.++. ...|... -....+||+++... .+.++++|.++++
T Consensus 391 l~~~L~~~Gi~v~~------~~~p~~~--------------~~~~~lRisv~~~~t~edid~li~~L~~~l~ 442 (502)
T 3hbx_A 391 ISDMLRRYGWIVPA------YTMPPNA--------------QHITVLRVVIREDFSRTLAERLVIDIEKVMR 442 (502)
T ss_dssp HHHHHHTTTCBCCE------EECCTTC--------------TTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEee------ccCCccc--------------CCceEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 77788777776642 1223210 02367999999544 4555555555554
No 164
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.51 E-value=2.4e-18 Score=163.15 Aligned_cols=225 Identities=14% Similarity=0.168 Sum_probs=140.3
Q ss_pred HHHHHHHHHhHh----C----CCeEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHHH------------------
Q 019543 57 RDALESLLAKLD----K----ADRALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDRL------------------ 109 (339)
Q Consensus 57 ~~~le~~la~~~----g----~~~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~~------------------ 109 (339)
..++++.+++++ | .++++++++|++|+.+++ .++++||+|+++.+.|++....
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g 147 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENG 147 (392)
Confidence 556666666653 4 345677777789998644 4788999999998876543210
Q ss_pred ---HH----------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC----cc----c--C
Q 019543 110 ---LS----------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR----PL----E--L 142 (339)
Q Consensus 110 ---~~----------------------------------~~I~~la~~~g~~livD~a~a~g~~~~----~~----~--~ 142 (339)
+. ++|+++|++||+++|+|++|+...... .+ . .
T Consensus 148 ~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 227 (392)
T 3b1d_A 148 LFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFK 227 (392)
Confidence 00 789999999999999999997643311 11 1 2
Q ss_pred CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCC-CCChHHHHHHHhchhh----HHHHHHHHHHHHHHH
Q 019543 143 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS-GLAPFDCWICLRGVKT----MALRVEKQQDNAQKI 217 (339)
Q Consensus 143 ~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~-~~~~~~a~~~~~~l~~----~~~r~~~~~~~a~~l 217 (339)
+.++++.|+||+++.+| ...|+++++++++++.++.....++. ..++...+.+...|+. ++...++..++.+++
T Consensus 228 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 306 (392)
T 3b1d_A 228 DFALVLSSATKTFNIAG-TKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFA 306 (392)
Confidence 34588999999998555 45678877654577777765544432 3344444434333332 344455556777777
Q ss_pred HHHHhC-CCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCCH-HHHHHHHccCC-cceeecccCCcccceecccc
Q 019543 218 AEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSL-ALSKHVVETTK-YFSITVSFGSVKSLISMPCF 293 (339)
Q Consensus 218 ~~~L~~-~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~-~~~~~~~~~L~-~~~i~v~~G~~~s~~~~p~~ 293 (339)
.+.|++ +|++..+ + +.++ ++++.+... ....++.+.|. ..|+.+..|..+. +
T Consensus 307 ~~~l~~~~~~~~~~--~----------------~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~----~-- 362 (392)
T 3b1d_A 307 VEYFAQEAPRLKVM--K----------------PQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYG----S-- 362 (392)
Confidence 777776 5554321 1 1233 335666432 24567888884 6788877654321 0
Q ss_pred ccCCCCCHHHHHhCCCCCCeEEEEeccC
Q 019543 294 MSHASIPVEVRQARGLTEDLVRISVGIE 321 (339)
Q Consensus 294 ~~h~~~~~~~~~~~g~~~~~lRisvg~e 321 (339)
..++.+||+++..
T Consensus 363 ---------------~~~~~iRi~~~~~ 375 (392)
T 3b1d_A 363 ---------------EGELHARLNIAAP 375 (392)
Confidence 0246799999863
No 165
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.68 E-value=6.4e-16 Score=149.72 Aligned_cols=241 Identities=17% Similarity=0.195 Sum_probs=150.6
Q ss_pred CcccCCCCchHHHHHHHHHhHhC---CCeEEEcCcHHHHHHHHHHhc---CCCCEEEEcCCCccchH-------------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAAVTHLL---GTGEEIVAGDDLYGGTD------------- 107 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g---~~~~l~~~sG~~A~~~il~ll---~~GD~Vi~~~~~y~~~~------------- 107 (339)
+.+.++.++...+|+++|+++++ .+.+++++||++|+.+++.++ ..++.|++.++.|++..
T Consensus 99 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 178 (453)
T 4ffc_A 99 TCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPY 178 (453)
T ss_dssp CTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTT
T ss_pred cccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCccc
Confidence 33444567788999999999986 357899999999998654322 34588888766655210
Q ss_pred ------------------------------------HHHH------------------------------HHHHHHHHHc
Q 019543 108 ------------------------------------RLLS------------------------------RKIAEMAHAH 121 (339)
Q Consensus 108 ------------------------------------~~~~------------------------------~~I~~la~~~ 121 (339)
..++ ++|.++|++|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~ 258 (453)
T 4ffc_A 179 KSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASEN 258 (453)
T ss_dssp TTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHH
T ss_pred ccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHc
Confidence 1111 8899999999
Q ss_pred CCEEEEeCCcC-CCCCcCcc-----cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHH
Q 019543 122 GALLLVDNSIM-SPVLSRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 195 (339)
Q Consensus 122 g~~livD~a~a-~g~~~~~~-----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~ 195 (339)
|++||+||+|. .+..+... ....|++ ||||++++ |. ..|++++++ ++++.+.......+...+|+.++.
T Consensus 259 ~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~--t~sK~~~~-G~-~~G~~~~~~-~i~~~~~~~~~~~t~~~~~~~~aa 333 (453)
T 4ffc_A 259 GVVFIADEVQTGFARTGAWFASEHEGIVPDIV--TMAKGIAG-GM-PLSAVTGRA-ELMDAVYAGGLGGTYGGNPVTCAA 333 (453)
T ss_dssp TCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT-TS-SCEEEEEEH-HHHTTSCTTSSCCSSSSCHHHHHH
T ss_pred CCEEEEecCccCCCcccccchhhhcCCCcchH--hhhhhhcC-Cc-CeEEEEECH-HHHhhhcccCcCCCCCcCHHHHHH
Confidence 99999999985 33222211 1233554 67899986 54 456777764 666655433322345667877766
Q ss_pred HHhchhhHH--HHHHHHHHHHHHHHHHHh----CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-------CH
Q 019543 196 CLRGVKTMA--LRVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------SL 262 (339)
Q Consensus 196 ~~~~l~~~~--~r~~~~~~~a~~l~~~L~----~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-------~~ 262 (339)
++..|+.+. ...++.+++.+++.+.|+ .++.+..+ ++.|.+++|.+. +.
T Consensus 334 a~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~ 395 (453)
T 4ffc_A 334 AVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV------------------RGRGAMLAIEIVKPGTLEPDA 395 (453)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE------------------EEETTEEEEEEBCTTSCCBCH
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE------------------EeeceEEEEEEecCcccCCCH
Confidence 666665432 234445555555555554 34443322 235678888762 34
Q ss_pred HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 263 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 263 ~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+.+.++.+.|.+.|+.+..++. ..+.+||++.+..+++.++.+.++|+
T Consensus 396 ~~~~~~~~~l~~~Gv~v~~~~~-------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~ 443 (453)
T 4ffc_A 396 ALTKSIAAEALSQGVLILTCGT-------------------------FGNVIRLLPPLVIGDDLLDEGITALS 443 (453)
T ss_dssp HHHHHHHHHHHHTTEECCEECT-------------------------TSCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEecCCC-------------------------CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 4567788888777776653321 23679999887665555554444443
No 166
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.67 E-value=2.2e-16 Score=152.58 Aligned_cols=235 Identities=16% Similarity=0.200 Sum_probs=144.0
Q ss_pred CCCCchHHHHHHHHHhHhC--CCeEEEcCcHHHHHHHHHH-hcC----CC----CEEEEcCCCccchH------------
Q 019543 51 RSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTH-LLG----TG----EEIVAGDDLYGGTD------------ 107 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~g--~~~~l~~~sG~~A~~~il~-ll~----~G----D~Vi~~~~~y~~~~------------ 107 (339)
++.++...+|+++|+++++ .+.+++++||++|+.+++. +.. +| |+|++.++.|++..
T Consensus 83 ~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 162 (448)
T 3dod_A 83 GMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELF 162 (448)
T ss_dssp SSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-------------------
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccc
Confidence 3456788999999999984 4689999999999985443 333 44 99999888775321
Q ss_pred -----------------------------------H----HHH-----------------------------HHHHHHHH
Q 019543 108 -----------------------------------R----LLS-----------------------------RKIAEMAH 119 (339)
Q Consensus 108 -----------------------------------~----~~~-----------------------------~~I~~la~ 119 (339)
. .+. ++|.++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~ 242 (448)
T 3dod_A 163 HHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCT 242 (448)
T ss_dssp ----------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHH
T ss_pred cccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHH
Confidence 0 110 89999999
Q ss_pred HcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHH-------HHHhcCC
Q 019543 120 AHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-------LQNAEGS 186 (339)
Q Consensus 120 ~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~-------~~~~~~~ 186 (339)
+||++||+||+|. .|..+.. .....|++ |+||++++ |....|++++++ ++++.+.. .....+.
T Consensus 243 ~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~--t~sK~l~~-G~~~ig~v~~~~-~~~~~~~~~~~~~~~~~~~~t~ 318 (448)
T 3dod_A 243 TYDVLMIVDEVATGFGRTGKMFACEHENVQPDLM--AAGKGITG-GYLPIAVTFATE-DIYKAFYDDYENLKTFFHGHSY 318 (448)
T ss_dssp HTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEEEH-HHHHTTCSCGGGCCCCCCCCTT
T ss_pred HhCCEEEEeccccCCCcccchhhhhhcCCCCCEE--EecccccC-CcCceEEEEECH-HHHHHhhhccccCCcccccCCC
Confidence 9999999999986 3322221 12234655 57899986 422456777764 67666643 1112345
Q ss_pred CCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhC---CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC
Q 019543 187 GLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS---HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 261 (339)
Q Consensus 187 ~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~---~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~ 261 (339)
..+|+.+++++..|+.+. ...++.+++.+++.+.|++ ++.+..+ ++.|.++++.+.+
T Consensus 319 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~------------------~~~g~~~~~~~~~ 380 (448)
T 3dod_A 319 TGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDI------------------RQLGFMCGAELVR 380 (448)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEE------------------EEETTEEEEEECS
T ss_pred CcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EeeeEEEEEEEcc
Confidence 567877777777776542 3355556666666666654 3332211 2346788888743
Q ss_pred HHH-----------HHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHH
Q 019543 262 LAL-----------SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDL 330 (339)
Q Consensus 262 ~~~-----------~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l 330 (339)
... +.++++.|...|+.+..+ .+.|||++.+..+++.++.+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------~~~iRi~~~~~~t~e~i~~~ 432 (448)
T 3dod_A 381 SKETKEPYPADRRIGYKVSLKMRELGMLTRPL----------------------------GDVIAFLPPLASTAEELSEM 432 (448)
T ss_dssp BTTTTBCCCGGGCHHHHHHHHHHHTTEECCEE----------------------------TTEEEECCCTTCCHHHHHHH
T ss_pred CcccccccchhhHHHHHHHHHHHHCCcEEecc----------------------------CCEEEEECCCCCCHHHHHHH
Confidence 211 356777776666654311 26799987776655555555
Q ss_pred HHHHh
Q 019543 331 DKALR 335 (339)
Q Consensus 331 ~~al~ 335 (339)
.++|+
T Consensus 433 l~~l~ 437 (448)
T 3dod_A 433 VAIMK 437 (448)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 167
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.67 E-value=1.9e-15 Score=146.13 Aligned_cols=231 Identities=11% Similarity=0.018 Sum_probs=139.4
Q ss_pred CCCchHHHHHHHHHhHhCCCeEEEcCcH-HHHHHHH-HHhcCCCCEEEEcCCCccchHHHH-------------------
Q 019543 52 SGNPTRDALESLLAKLDKADRALCFTSG-MAALAAV-THLLGTGEEIVAGDDLYGGTDRLL------------------- 110 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g~~~~l~~~sG-~~A~~~i-l~ll~~GD~Vi~~~~~y~~~~~~~------------------- 110 (339)
...+..+++|+.+++ +|.++.+++++| ++|+.++ .+++++||+|+++++.|.+....+
T Consensus 54 ~~~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~ 132 (446)
T 2x3l_A 54 HPEEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLTN 132 (446)
T ss_dssp SCSSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTTS
T ss_pred CcchHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCeeccccC
Confidence 355678999999999 998776766666 6888754 457899999999988765443211
Q ss_pred -----------H--------------------HHHHHHHHHcCCEEEEeCCcCCCC-C----cCcccCCCeEEEeccccc
Q 019543 111 -----------S--------------------RKIAEMAHAHGALLLVDNSIMSPV-L----SRPLELGADIVMHSATKF 154 (339)
Q Consensus 111 -----------~--------------------~~I~~la~~~g~~livD~a~a~g~-~----~~~~~~~~Di~~~S~sK~ 154 (339)
. ++|+++|++||+++++|++|+... + ......++|++++|+||+
T Consensus 133 ~~~~~d~~~l~~~~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~~~S~~K~ 212 (446)
T 2x3l_A 133 HYNKVNLSRLNNDGHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVVQSFHKT 212 (446)
T ss_dssp SEEEEEC-------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEEEECHHHH
T ss_pred cCCCCCHHHHcCCCceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEEEECCccc
Confidence 1 999999999999999999998622 1 122345789999999998
Q ss_pred cccCCCceEEEEEEcChhHHH--HHHHHHHhc-CCCCChHHHHHHHhchhhHHH-----HHHHHHHHHHHHHHHHhCCCC
Q 019543 155 IAGHSDVMAGVLAVKGERLAK--ELYFLQNAE-GSGLAPFDCWICLRGVKTMAL-----RVEKQQDNAQKIAEFLASHPR 226 (339)
Q Consensus 155 l~g~~~~~gG~v~~~~~~l~~--~l~~~~~~~-~~~~~~~~a~~~~~~l~~~~~-----r~~~~~~~a~~l~~~L~~~~~ 226 (339)
++++. .+|+++++++ +++ .+......+ .+..+....+.+...++.+.. ..++..++++++.+. +
T Consensus 213 l~~~~--g~g~l~~~~~-~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g 284 (446)
T 2x3l_A 213 LPALT--MGSVLYIHKN-APYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-----G 284 (446)
T ss_dssp SSSCT--TCEEEEEETT-CTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----T
T ss_pred ccccc--ccEEEEEcCC-cCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-----C
Confidence 87653 3578888764 433 333222222 333344332222222333322 334444445555444 4
Q ss_pred ceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHh
Q 019543 227 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 306 (339)
Q Consensus 227 i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~ 306 (339)
++.+. +. ....++|.+.+ ....++.+.|...|+.+...
T Consensus 285 ~~~~~-~~----------------~~~~l~i~~~~-~~~~~l~~~L~~~GI~v~~~------------------------ 322 (446)
T 2x3l_A 285 FEMLQ-VD----------------DPLKLLIKYEG-FTGHDIQNWFMNAHIYLELA------------------------ 322 (446)
T ss_dssp CEEEE-CS----------------STTEEEEECTT-SCHHHHHHHHHHTTEEESEE------------------------
T ss_pred CEECc-CC----------------CCeEEEEEeCC-cCHHHHHHHHHHCCCEEEec------------------------
Confidence 43322 11 11246676642 12345666676557765411
Q ss_pred CCCCCCeEEEEeccCCHH---HHHHHHHHHHhc
Q 019543 307 RGLTEDLVRISVGIEDVN---DLISDLDKALRT 336 (339)
Q Consensus 307 ~g~~~~~lRisvg~e~~~---~li~~l~~al~~ 336 (339)
..+.+|++++..+++ .+++.|.+.++.
T Consensus 323 ---g~~~iRi~~~~~~t~e~i~l~~aL~~~~~~ 352 (446)
T 2x3l_A 323 ---DDYQALAILPLWHHDDTYLFDSLLRKIEDM 352 (446)
T ss_dssp ---CSSCEEEECCCCCTTCCCCHHHHHHHHHTC
T ss_pred ---CCCEEEEEeecCCCHHHHHHHHHHHHHHHh
Confidence 124699999863332 556666666554
No 168
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.67 E-value=7.8e-16 Score=148.57 Aligned_cols=238 Identities=15% Similarity=0.156 Sum_probs=149.9
Q ss_pred CCCCchHHHHHHHHHhHhC--CCeEEEcCcHHHHHHHHHH-hcC--------CCCEEEEcCCCccch-------------
Q 019543 51 RSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTH-LLG--------TGEEIVAGDDLYGGT------------- 106 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~g--~~~~l~~~sG~~A~~~il~-ll~--------~GD~Vi~~~~~y~~~------------- 106 (339)
++..+...+|+++++++++ .+.+++++||++|+.+++. +.. +||+|++.++.|++.
T Consensus 89 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~ 168 (449)
T 3a8u_X 89 QYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGN 168 (449)
T ss_dssp SCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHH
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhh
Confidence 3456778999999999995 4578899999999976543 332 689999977766431
Q ss_pred ------------------------------------HH----HH-----H------------------------HHHHHH
Q 019543 107 ------------------------------------DR----LL-----S------------------------RKIAEM 117 (339)
Q Consensus 107 ------------------------------------~~----~~-----~------------------------~~I~~l 117 (339)
.. .+ . ++|.++
T Consensus 169 ~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l 248 (449)
T 3a8u_X 169 RKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREI 248 (449)
T ss_dssp HTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHH
T ss_pred ccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHH
Confidence 11 11 1 899999
Q ss_pred HHHcCCEEEEeCCc-CCCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH---------H
Q 019543 118 AHAHGALLLVDNSI-MSPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---------N 182 (339)
Q Consensus 118 a~~~g~~livD~a~-a~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~---------~ 182 (339)
|++||++||+|++| +.|..+.. .....|++ |+||++++ |....|++++++ ++++.+.... .
T Consensus 249 ~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~~~G~~~~~~-~~~~~l~~~~~~~~~~~~~~ 324 (449)
T 3a8u_X 249 CNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVTN-GAIPMGAVIAST-EIYQTFMNQPTPEYAVEFPH 324 (449)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSSCCEEEEEEH-HHHHHHHTCSSCTTSCSSCC
T ss_pred HHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEcccccC-CCCceEEEEECH-HHHHHhhccCcccccccccc
Confidence 99999999999999 45533221 12235766 78899985 312345666664 6766665421 0
Q ss_pred hcCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC
Q 019543 183 AEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 260 (339)
Q Consensus 183 ~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~ 260 (339)
..+...+++.++.+...|+.+. ...++.+++.+++.+.|++++.+..+.. .++.|.+++|.+.
T Consensus 325 ~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~---------------~~~~g~~~~i~~~ 389 (449)
T 3a8u_X 325 GYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGAKNVID---------------IRNFGLAGAIQIA 389 (449)
T ss_dssp CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEE---------------EEEETTEEEEEEC
T ss_pred cCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCeEE---------------EeeeEEEEEEEEe
Confidence 1234557776666666666543 3466677778888888876432211100 0225678899875
Q ss_pred CHH-----HHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 261 SLA-----LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 261 ~~~-----~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+.. ...++.+.|...|+.++.| . +.+|||+.+..+++.++.+.++|+
T Consensus 390 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~---------------------------g-~~iRis~~~~~t~~~i~~~l~~l~ 441 (449)
T 3a8u_X 390 PRDGDAIVRPFEAGMALWKAGFYVRFG---------------------------G-DTLQFGPTFNSKPQDLDRLFDAVG 441 (449)
T ss_dssp CBTTBSSHHHHHHHHHHHHHTEECEEE---------------------------T-TEEEECCCTTCCHHHHHHHHHHHH
T ss_pred cCcccccccHHHHHHHHHHCCcEEecC---------------------------C-CEEEEECCCcCCHHHHHHHHHHHH
Confidence 321 2235777776667765421 1 569999876555555555555443
No 169
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.67 E-value=1.2e-15 Score=147.56 Aligned_cols=240 Identities=16% Similarity=0.188 Sum_probs=151.7
Q ss_pred cccCCCCchHHHHHHHHHhHhC---CCeEEEcCcHHHHHHHHHH-hc--CCCCEEEEcCCCccchH--------------
Q 019543 48 DYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAAVTH-LL--GTGEEIVAGDDLYGGTD-------------- 107 (339)
Q Consensus 48 ~y~r~~~~~~~~le~~la~~~g---~~~~l~~~sG~~A~~~il~-ll--~~GD~Vi~~~~~y~~~~-------------- 107 (339)
.+.++.++...+|+++|+++++ .+.+++++||++|+.+++. +. ..++.|++.++.|+|..
T Consensus 97 ~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 176 (451)
T 3oks_A 97 CFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYK 176 (451)
T ss_dssp TTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTT
T ss_pred cCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccc
Confidence 3344567788999999999985 3579999999999986543 22 24578888666654210
Q ss_pred ----------------------------------------HHHH------------------------------HHHHHH
Q 019543 108 ----------------------------------------RLLS------------------------------RKIAEM 117 (339)
Q Consensus 108 ----------------------------------------~~~~------------------------------~~I~~l 117 (339)
..++ ++|.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l 256 (451)
T 3oks_A 177 DGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDW 256 (451)
T ss_dssp TTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHH
T ss_pred cCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHH
Confidence 0110 899999
Q ss_pred HHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChH
Q 019543 118 AHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 191 (339)
Q Consensus 118 a~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~ 191 (339)
|++||++||+||+|. .+..+.. .....|++ ||||++++ |. ..|++++++ ++++.+.......+...+|+
T Consensus 257 ~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~-G~-~iG~v~~~~-~~~~~~~~~~~~~t~~~~~~ 331 (451)
T 3oks_A 257 CRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI--VTAKGIAG-GL-PLSAVTGRA-EIMDSPHVSGLGGTYGGNPI 331 (451)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TS-SCEEEEEEH-HHHTCSCTTSBCCSSSSCHH
T ss_pred HHHcCCEEEEEecccCCCccccchhhhhcCCCCCee--eehhhhhC-Cc-ceEEEEECH-HHHhhhcCCCcCCCCCCCHH
Confidence 999999999999995 3322221 12234665 78899986 54 455777764 66665543322334566787
Q ss_pred HHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-----
Q 019543 192 DCWICLRGVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG----- 260 (339)
Q Consensus 192 ~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~----- 260 (339)
.+++++..|+.+. ...++.+++.+++.+.|++ ++.+..+ ++.|.+++|.+.
T Consensus 332 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~G~~~~~~~~~~~~~ 393 (451)
T 3oks_A 332 ACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDV------------------RGRGAMIAMELVKAGTT 393 (451)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEEBSTTSC
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE------------------EEeeEEEEEEEecCccC
Confidence 7777766666442 2345555556666665543 4443222 235678888772
Q ss_pred --CHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 261 --SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 261 --~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+...+.++.+.|.+.|+.+..++. ..+.+||++.+..+++.++.+.++|+
T Consensus 394 ~~~~~~~~~~~~~l~~~Gv~v~~~~~-------------------------~~~~iRi~~~~~~t~e~i~~~l~~l~ 445 (451)
T 3oks_A 394 EPDADLTKALCAGAHAAGVIVLSCGT-------------------------YGNVVRFLPPLSIGDDLLNEGLDVLE 445 (451)
T ss_dssp CBCHHHHHHHHHHHHHTTEECEEECT-------------------------TSCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCcEEecCCC-------------------------CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 345567788888777776543211 23679999887766555555555443
No 170
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.67 E-value=3.2e-15 Score=144.91 Aligned_cols=238 Identities=13% Similarity=0.083 Sum_probs=146.8
Q ss_pred cCCCCchHHHHHHHHHhHhC--CCeEEEcCcHHHHHHHHHH-hc--------CCCCEEEEcCCCccch------------
Q 019543 50 TRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTH-LL--------GTGEEIVAGDDLYGGT------------ 106 (339)
Q Consensus 50 ~r~~~~~~~~le~~la~~~g--~~~~l~~~sG~~A~~~il~-ll--------~~GD~Vi~~~~~y~~~------------ 106 (339)
.++.++..++|+++|+++.+ .+.+++++||++|+.+++. +. .++|.|++.++.|++.
T Consensus 90 ~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~ 169 (460)
T 3gju_A 90 VGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDL 169 (460)
T ss_dssp TTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGG
T ss_pred cccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcc
Confidence 34456788999999999974 4678999999999986544 33 3568999877766421
Q ss_pred -------------------------------------HH----HH-----H------------------------HHHHH
Q 019543 107 -------------------------------------DR----LL-----S------------------------RKIAE 116 (339)
Q Consensus 107 -------------------------------------~~----~~-----~------------------------~~I~~ 116 (339)
.. .+ . ++|.+
T Consensus 170 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~ 249 (460)
T 3gju_A 170 FHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQA 249 (460)
T ss_dssp GTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHH
T ss_pred cccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHH
Confidence 01 11 0 89999
Q ss_pred HHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH----HH---h
Q 019543 117 MAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----QN---A 183 (339)
Q Consensus 117 la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~----~~---~ 183 (339)
+|++||++||+||+|. .|..+.. .....|++ +|||++++... ..|++++++ ++++.+... .. .
T Consensus 250 l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t~sK~l~gG~~-~lg~v~~~~-~i~~~~~~~~~~~~~~~~~ 325 (460)
T 3gju_A 250 VLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI--TIAKGLTSAYA-PLSGVIVAD-RVWQVLVQGSDKLGSLGHG 325 (460)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--EECGGGTTTSS-CCEEEEEEH-HHHHHHHHHHHHHCSCSCC
T ss_pred HHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee--eeehhhcCCCC-CeEEEEECH-HHHHHHhcccccccccccC
Confidence 9999999999999996 4332221 12234655 57899986212 346777764 677777532 11 1
Q ss_pred cCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHH----hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEE
Q 019543 184 EGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFL----ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 257 (339)
Q Consensus 184 ~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L----~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~ 257 (339)
.+...+|+.++.++..|+.+. ...++.+++.+++++.| +.++.+..+. +.|.+++|
T Consensus 326 ~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~------------------~~g~~~~~ 387 (460)
T 3gju_A 326 WTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVR------------------GDGMLAAV 387 (460)
T ss_dssp CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEE------------------EETTEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe------------------eeeEEEEE
Confidence 235567877777766666432 23444555555555544 4555443322 24667788
Q ss_pred eeCCH-----------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHH
Q 019543 258 LTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDL 326 (339)
Q Consensus 258 ~~~~~-----------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~l 326 (339)
.+.+. +.+.++.+.|.+.|+.++.++ .++.|||++.+..+++.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--------------------------~~~~iRi~~~~~~t~e~ 441 (460)
T 3gju_A 388 EFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP--------------------------QGDILGFAPPLCLTREQ 441 (460)
T ss_dssp EECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS--------------------------SSCEEEECCCTTCCHHH
T ss_pred EEccCccccccccchHHHHHHHHHHHHHCCeEEecCC--------------------------CCCEEEEECCCCCCHHH
Confidence 76421 124567777766677554221 13679999776655555
Q ss_pred HHHHHHHHh
Q 019543 327 ISDLDKALR 335 (339)
Q Consensus 327 i~~l~~al~ 335 (339)
++.+.++|+
T Consensus 442 i~~~l~~l~ 450 (460)
T 3gju_A 442 ADIVVSKTA 450 (460)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555444443
No 171
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.66 E-value=6.2e-16 Score=151.23 Aligned_cols=232 Identities=14% Similarity=0.149 Sum_probs=149.2
Q ss_pred HHHHHHHHhHhCCC----eEEEcCcHHHHHHHHH-HhcC-----CC---CEEEEcCCCccchHHHHH-------------
Q 019543 58 DALESLLAKLDKAD----RALCFTSGMAALAAVT-HLLG-----TG---EEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 58 ~~le~~la~~~g~~----~~l~~~sG~~A~~~il-~ll~-----~G---D~Vi~~~~~y~~~~~~~~------------- 111 (339)
+++.+++++++|.+ .+++++||++|+.+++ ++.+ +| |+|+++.+.|......+.
T Consensus 110 ~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~ 189 (497)
T 3mc6_A 110 SEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP 189 (497)
T ss_dssp HHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT
T ss_pred HHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc
Confidence 45555677788865 6888888999997544 3433 56 999999998876654433
Q ss_pred ------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-------------cCcccC
Q 019543 112 ------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-------------SRPLEL 142 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g~~livD~a~a~g~~-------------~~~~~~ 142 (339)
++|.++|++||+++++|++|+.+.. .+....
T Consensus 190 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~ 269 (497)
T 3mc6_A 190 TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVP 269 (497)
T ss_dssp TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTST
T ss_pred ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCC
Confidence 8999999999999999999973211 122235
Q ss_pred CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-HH-hcCC---------CCC---hHHHHHHHhchh--hHHHH
Q 019543 143 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QN-AEGS---------GLA---PFDCWICLRGVK--TMALR 206 (339)
Q Consensus 143 ~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~-~~-~~~~---------~~~---~~~a~~~~~~l~--~~~~r 206 (339)
++|+++.|++|++.++. ..|+++++++.+ ...... .. ..+. ..+ ....+.++..+. .+.++
T Consensus 270 g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~ 346 (497)
T 3mc6_A 270 GVTSISCDTHKYGFAPK--GSSVIMYRNSDL-RMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIES 346 (497)
T ss_dssp TCCEEEEETTTTTCCCS--SCEEEECSSHHH-HTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEECchhhcCCCC--CceeEEecCHHH-HhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHH
Confidence 78999999999986543 357777776432 211100 00 0011 000 122334444333 34667
Q ss_pred HHHHHHHHHHHHHHHhC-CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcc
Q 019543 207 VEKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVK 285 (339)
Q Consensus 207 ~~~~~~~a~~l~~~L~~-~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~ 285 (339)
.++..++++++.+.|++ +++++.+..| .++++.|...+. ...++.+.|...|+.++.+.
T Consensus 347 ~~~~~~~~~~l~~~L~~~~~g~~~~~~~-----------------~~~~v~~~~~~~-~~~~l~~~L~~~Gi~v~~~~-- 406 (497)
T 3mc6_A 347 CQEIVGAAMKFKKYIQENIPDLDIMGNP-----------------RYSVISFSSKTL-NIHELSDRLSKKGWHFNALQ-- 406 (497)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCEECSCC-----------------CSSEEEEECTTT-THHHHHHHHHTTTCBCEECC--
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEecCC-----------------CeeEEEEeCCCC-CHHHHHHHHHhCCEEEecCC--
Confidence 78888999999999998 5887543222 456788876432 34567777777677654221
Q ss_pred cceeccccccCCCCCHHHHHhCCCCCCeEEEEec---cCCHHHHHHHHHHHHhc
Q 019543 286 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLISDLDKALRT 336 (339)
Q Consensus 286 s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg---~e~~~~li~~l~~al~~ 336 (339)
. +..+|++++ .++.++++++|.+++++
T Consensus 407 ----~--------------------~~~~ri~~~~~t~e~i~~~~~~L~~~l~~ 436 (497)
T 3mc6_A 407 ----K--------------------PVALHMAFTRLSAHVVDEICDILRTTVQE 436 (497)
T ss_dssp ----S--------------------SCCEEEECCTTTTCTHHHHHHHHHHHHHH
T ss_pred ----C--------------------CCeEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 1 134688875 46778888888887764
No 172
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.66 E-value=9e-16 Score=147.03 Aligned_cols=258 Identities=16% Similarity=0.108 Sum_probs=139.6
Q ss_pred chHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHHH-hc--------CCCCEEEEcCCCccch-----------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAVTH-LL--------GTGEEIVAGDDLYGGT----------------- 106 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il~-ll--------~~GD~Vi~~~~~y~~~----------------- 106 (339)
+..+++++++++++|.+ +++++++|++|+.+++. ++ ++||+|++..|.|++.
T Consensus 61 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~ 140 (432)
T 3a9z_A 61 DIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPL 140 (432)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHH
Confidence 45689999999999974 67777888999976443 43 5899888877776532
Q ss_pred HHHHH-------------------------------------------------HHHHHHHHHcC----------CEEEE
Q 019543 107 DRLLS-------------------------------------------------RKIAEMAHAHG----------ALLLV 127 (339)
Q Consensus 107 ~~~~~-------------------------------------------------~~I~~la~~~g----------~~liv 127 (339)
..+.+ ++|.++|++|| +++|+
T Consensus 141 ~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~liv 220 (432)
T 3a9z_A 141 EHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHT 220 (432)
T ss_dssp HHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEE
T ss_pred HHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEE
Confidence 11100 89999999999 99999
Q ss_pred eCCcCCCCCc-CcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-------HHhcCCCCChHHHHHHHhc
Q 019543 128 DNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRG 199 (339)
Q Consensus 128 D~a~a~g~~~-~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~-------~~~~~~~~~~~~a~~~~~~ 199 (339)
|++|+.+... +....+.|+++.|+||++| + . .|+++++++.....++.. ........++...+.+...
T Consensus 221 Dea~~~~~~~~~~~~~~~d~~~~s~~K~~g-~--~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aa 296 (432)
T 3a9z_A 221 DAAQALGKRRVDVEDLGVDFLTIVGHKFYG-P--R-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKA 296 (432)
T ss_dssp ECTTTTTTSCCCHHHHCCSEEEEEGGGTTC-C--S-CEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHH
T ss_pred EchhhhCCcccChhhcCCCEEEEehhHhcC-C--c-ceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHH
Confidence 9999876432 1123468999999999875 2 3 678888763212222110 1111223444433333233
Q ss_pred hhh----HHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-HHHHHHHccCCc
Q 019543 200 VKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKY 274 (339)
Q Consensus 200 l~~----~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~-~~~~~~~~~L~~ 274 (339)
++. ++...++..++++++.+.|++++++.. .++..... ....+.+++|.+.+. .....+.+.++
T Consensus 297 l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~- 365 (432)
T 3a9z_A 297 ADLVSENCETYEAHMRDIRDYLEERLEAEFGKRI-HLNSRFPG---------VERLPNTCNFSIQGSQLRGYMVLAQCQ- 365 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGE-EESSCCTT---------CCBCTTEEEEEECSTTCCHHHHHHHCS-
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhccCCcE-EEeCCCCc---------ccCCCCEEEEEeCCCCCcHHHHHHHhc-
Confidence 332 344556666778888888877554432 22111000 011345788877531 12345555553
Q ss_pred ceeecccCCcccceeccccccCCCCCHHHHHhCCCC----CCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 275 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 275 ~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~----~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
++.++.|...... ++. . +.......|+. ++.||||++...+++.++.+.++|+
T Consensus 366 -~i~~~~G~~~~~~-~~~-----~-~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~ 422 (432)
T 3a9z_A 366 -TLLASVGASCHSD-HED-----R-PSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLK 422 (432)
T ss_dssp -SEECBSSCGGGGG-GTT-----S-CCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHH
T ss_pred -CeEEeccccccCC-CCC-----C-ccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHH
Confidence 5666666432210 000 0 01122334543 4789999996554444444444443
No 173
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.66 E-value=3.4e-15 Score=141.63 Aligned_cols=167 Identities=12% Similarity=0.080 Sum_probs=107.3
Q ss_pred HHHHHHHHHhHhC--------CCeEEE--cCcHHHHHHHHH-H---hcCCCCEEEEcCCCccchHHHHH-----------
Q 019543 57 RDALESLLAKLDK--------ADRALC--FTSGMAALAAVT-H---LLGTGEEIVAGDDLYGGTDRLLS----------- 111 (339)
Q Consensus 57 ~~~le~~la~~~g--------~~~~l~--~~sG~~A~~~il-~---ll~~GD~Vi~~~~~y~~~~~~~~----------- 111 (339)
..++++.++++++ .++.++ +++|++|+..++ . +++|||+|+++++.|.+....++
T Consensus 73 ~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~ 152 (401)
T 7aat_A 73 LADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRY 152 (401)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeee
Confidence 5567777777654 456655 788899997543 2 34899999999998876653332
Q ss_pred ---------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc------c
Q 019543 112 ---------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP------L 140 (339)
Q Consensus 112 ---------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~------~ 140 (339)
++|+++|++||+++|+|++|........ +
T Consensus 153 ~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~ 232 (401)
T 7aat_A 153 YDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWAL 232 (401)
T ss_dssp EETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHH
T ss_pred eccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHH
Confidence 8899999999999999999975543321 1
Q ss_pred -----cCCCeEEEeccccccccCCCceEEEEEE--cChh----HHHHHHHHHHhcCCCCChHHHHHHHhc----------
Q 019543 141 -----ELGADIVMHSATKFIAGHSDVMAGVLAV--KGER----LAKELYFLQNAEGSGLAPFDCWICLRG---------- 199 (339)
Q Consensus 141 -----~~~~Di~~~S~sK~l~g~~~~~gG~v~~--~~~~----l~~~l~~~~~~~~~~~~~~~a~~~~~~---------- 199 (339)
.....++++|+||.++.+|.++ |++++ .+++ +...++..........+...+..+...
T Consensus 233 ~~~~~~~~~~i~~~S~sK~~~~~G~Ri-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 311 (401)
T 7aat_A 233 RHFIEQGIDVVLSQSYAKNMGLYGERA-GAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEW 311 (401)
T ss_dssp HHHHHTTCCCEEEEECTTTSCCGGGCE-EEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHhcCCcEEEEecCCcccccccCce-EEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHH
Confidence 1233589999999999777654 55554 2334 334444433333333333333333222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhCC
Q 019543 200 VKTMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 200 l~~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
.+.+....++..++.+++.+.|+++
T Consensus 312 ~~~~~~~~~~~~~~r~~l~~~L~~~ 336 (401)
T 7aat_A 312 LVEVKGMADRIISMRTQLVSNLKKE 336 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2234555666677788888888765
No 174
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.66 E-value=7e-16 Score=151.68 Aligned_cols=237 Identities=16% Similarity=0.149 Sum_probs=151.0
Q ss_pred CCchHHHHH----HHHHhHhCCC----eE--EEcCcHHHHHHHHH-HhcCCC--------CEEEEcCCCccchHHHHH--
Q 019543 53 GNPTRDALE----SLLAKLDKAD----RA--LCFTSGMAALAAVT-HLLGTG--------EEIVAGDDLYGGTDRLLS-- 111 (339)
Q Consensus 53 ~~~~~~~le----~~la~~~g~~----~~--l~~~sG~~A~~~il-~ll~~G--------D~Vi~~~~~y~~~~~~~~-- 111 (339)
..|...++| +++++++|.+ .+ ++++||++|+..++ .+.++| |+|+++.+.|.+....+.
T Consensus 133 ~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~ 212 (514)
T 3mad_A 133 LWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYF 212 (514)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHc
Confidence 344444444 5558888865 45 88999999998544 455665 999999999887654433
Q ss_pred ----------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC---------
Q 019543 112 ----------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL--------- 136 (339)
Q Consensus 112 ----------------------------------------------~~I~~la~~~g~~livD~a~a~g~~--------- 136 (339)
++|.++|++||++|++|++|+.+..
T Consensus 213 G~~v~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~ 292 (514)
T 3mad_A 213 GIKLVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYP 292 (514)
T ss_dssp TCEEEEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCC
T ss_pred CCeeEEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCC
Confidence 9999999999999999999976532
Q ss_pred ---cCcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH-Hh---------cCCCCCh---HHHHHHHhch
Q 019543 137 ---SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NA---------EGSGLAP---FDCWICLRGV 200 (339)
Q Consensus 137 ---~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-~~---------~~~~~~~---~~a~~~~~~l 200 (339)
.+....++|++++|++|++.++. ..|+++++++.+........ .. .....+. ..++.++..+
T Consensus 293 ~~~~~~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l 370 (514)
T 3mad_A 293 VPPFDFRLEGVTSVSADTHKYGYGAK--GTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSL 370 (514)
T ss_dssp CCCCSTTSTTCCEEEECTTTTTCCCS--SCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHH
T ss_pred CCcccccCCCCcEEEECchhccCCCC--CeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHH
Confidence 11123478999999999976543 35677777643321110000 00 0111111 2233333333
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceee
Q 019543 201 --KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSIT 278 (339)
Q Consensus 201 --~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~ 278 (339)
+.++++.++..++++++.+.|+++++++.+. + ..++++|...+. ...++.+.|...|+.
T Consensus 371 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~-----------------~~~~~~~~~~~~-~~~~l~~~L~~~Gi~ 431 (514)
T 3mad_A 371 GEEGYLDATRRILQAADRLKAGVRAIPSLKILG-D-----------------PLWVIAVASDEL-NIYQVMEEMAGRGWR 431 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESS-C-----------------CSSEEEEECSSS-CHHHHHHHHHTTTCB
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeC-C-----------------CeEEEEEeCCCC-CHHHHHHHHHhcCCE
Confidence 3356778888899999999999987765322 1 234788876432 245677777666665
Q ss_pred cccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEec-----cCCHHHHHHHHHHHHhc
Q 019543 279 VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLISDLDKALRT 336 (339)
Q Consensus 279 v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg-----~e~~~~li~~l~~al~~ 336 (339)
++ |. . .++.+|++++ .++.+++++.|.+++++
T Consensus 432 v~-g~------~-------------------~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~ 468 (514)
T 3mad_A 432 LN-GL------H-------------------RPPAFHVALTLRHTEPGVVDRFLADLQDAVAQ 468 (514)
T ss_dssp CE-EE------T-------------------TTTEEEEECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred ec-cC------C-------------------CCCeEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 41 10 0 1256999998 25667777777777653
No 175
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.66 E-value=1.6e-15 Score=146.96 Aligned_cols=239 Identities=15% Similarity=0.160 Sum_probs=149.1
Q ss_pred CcccCCCCchHHHHHHHHHhHhC--CCeEEEcCcHHHHHHHHHH-hcC--------CCCEEEEcCCCccch---------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTH-LLG--------TGEEIVAGDDLYGGT--------- 106 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g--~~~~l~~~sG~~A~~~il~-ll~--------~GD~Vi~~~~~y~~~--------- 106 (339)
+.+.++.++..++|+++|+++++ .+.+++++||++|+..++. +.+ ++|.|++.++.|++.
T Consensus 86 ~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~ 165 (459)
T 4a6r_A 86 NTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGG 165 (459)
T ss_dssp CTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSC
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcC
Confidence 33445567889999999999984 5689999999999985443 433 578999877766531
Q ss_pred ---------------------------------------HH----HHH-----------------------------HHH
Q 019543 107 ---------------------------------------DR----LLS-----------------------------RKI 114 (339)
Q Consensus 107 ---------------------------------------~~----~~~-----------------------------~~I 114 (339)
.. .+. ++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l 245 (459)
T 4a6r_A 166 MKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEI 245 (459)
T ss_dssp CTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHH
T ss_pred ChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHH
Confidence 11 110 899
Q ss_pred HHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHH---HHHhcC
Q 019543 115 AEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF---LQNAEG 185 (339)
Q Consensus 115 ~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~---~~~~~~ 185 (339)
.++|++||++||+||+|. .|..+.. .....|++ +|||++++.+.. .|+++++ +++++.+.. .....+
T Consensus 246 ~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~--t~sK~l~gg~~~-lg~v~~~-~~i~~~~~~~~~~~~~~t 321 (459)
T 4a6r_A 246 ERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLF--TAAKGLSSGYLP-IGAVFVG-KRVAEGLIAGGDFNHGFT 321 (459)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSSC-CEEEEEC-HHHHHHHHHHCTTHHHHH
T ss_pred HHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee--ehhhhhcCCCCC-ccceeeC-HHHHHHhhcCCCcccCCC
Confidence 999999999999999985 3332221 12234665 578999864334 4567676 467777762 222234
Q ss_pred CCCChHHHHHHHhchhhHH--HHHHHHH-HHHHHHHHHH----hCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEe
Q 019543 186 SGLAPFDCWICLRGVKTMA--LRVEKQQ-DNAQKIAEFL----ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 258 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~--~r~~~~~-~~a~~l~~~L----~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~ 258 (339)
...+|+.+++++..|+.+. ...++.+ ++.+++.+.| +.++.+..+. +.|.++.|.
T Consensus 322 ~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~------------------~~g~~~~~~ 383 (459)
T 4a6r_A 322 YSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVR------------------GVGMVQAFT 383 (459)
T ss_dssp HCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEE------------------EETTEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE------------------EEEEEEEEE
Confidence 4567877777766666442 2344444 4555555555 4444443222 246677777
Q ss_pred eCCH-----------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHH
Q 019543 259 TGSL-----------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLI 327 (339)
Q Consensus 259 ~~~~-----------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li 327 (339)
+.+. +.+.++.+.|.+.|+.+..+ . +.|||++.+..+++.+
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~---------------------------g-~~iRi~~~~~~t~e~i 435 (459)
T 4a6r_A 384 LVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRAC---------------------------G-DHIVSAPPLVMTRAEV 435 (459)
T ss_dssp ECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEE---------------------------T-TEEEECCCTTCCHHHH
T ss_pred EecCccccccccchHHHHHHHHHHHHHCCeEEecC---------------------------C-CEEEEECCCCCCHHHH
Confidence 6321 22566777776667655421 1 5799997766555555
Q ss_pred HHHHHHHh
Q 019543 328 SDLDKALR 335 (339)
Q Consensus 328 ~~l~~al~ 335 (339)
+.+.++|+
T Consensus 436 ~~~l~~l~ 443 (459)
T 4a6r_A 436 DEMLAVAE 443 (459)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55444443
No 176
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.66 E-value=1.7e-15 Score=147.03 Aligned_cols=209 Identities=13% Similarity=0.133 Sum_probs=135.0
Q ss_pred cCCCCchHHHHHHHHHhHhC--CCeEEEcCcHHHHHHHHHH-hcC-------CC-CEEEEcCCCccchH-----------
Q 019543 50 TRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTH-LLG-------TG-EEIVAGDDLYGGTD----------- 107 (339)
Q Consensus 50 ~r~~~~~~~~le~~la~~~g--~~~~l~~~sG~~A~~~il~-ll~-------~G-D~Vi~~~~~y~~~~----------- 107 (339)
+++.++...+|+++|+++++ .+.+++++||++|+.+++. +.+ +| +.|++.++.|++..
T Consensus 113 ~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~ 192 (457)
T 3tfu_A 113 GGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHG 192 (457)
T ss_dssp SSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC-
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcc
Confidence 45567888999999999995 4688999999999986443 332 55 47887666654310
Q ss_pred ----------------------------H----HHH-----------------------------HHHHHHHHHcCCEEE
Q 019543 108 ----------------------------R----LLS-----------------------------RKIAEMAHAHGALLL 126 (339)
Q Consensus 108 ----------------------------~----~~~-----------------------------~~I~~la~~~g~~li 126 (339)
. .+. ++|.++|++||++||
T Consensus 193 ~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI 272 (457)
T 3tfu_A 193 GMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLI 272 (457)
T ss_dssp ---------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEE
T ss_pred cccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 0 110 889999999999999
Q ss_pred EeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-----HHhcCCCCChHHHHH
Q 019543 127 VDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-----QNAEGSGLAPFDCWI 195 (339)
Q Consensus 127 vD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~-----~~~~~~~~~~~~a~~ 195 (339)
+||++. .|..+.. .....|++ ||||.++|. ....|++++++ ++++.+... ....+...+|+.++.
T Consensus 273 ~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~gG-~~~lG~v~~~~-~i~~~~~~~~~~~~~~~~t~~~n~~a~aa 348 (457)
T 3tfu_A 273 FDEIATGFGRTGALFAADHAGVSPDIM--CVGKALTGG-YLSLAATLCTA-DVAHTISAGAAGALMHGPTFMANPLACAV 348 (457)
T ss_dssp EECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTT-SSCCEEEEEEH-HHHHHHHHSSSCSCCCCCTTTTCHHHHHH
T ss_pred EEcCccCCccccchhHhHhcCCCceEE--EEChhhhCC-CcceEEEEEcH-HHHHHhhccCCCceeEecCCCcCHHHHHH
Confidence 999985 3322221 12245766 789999862 12356777764 677766421 111234567877777
Q ss_pred HHhchhhHH--HHHHHHHHHHHHHHHHHhCC---CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHc
Q 019543 196 CLRGVKTMA--LRVEKQQDNAQKIAEFLASH---PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVE 270 (339)
Q Consensus 196 ~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~---~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~ 270 (339)
++..|+.+. ...++.+++.+++.+.|+++ +.+..+ ++.|.+++|.+.+...+.++.+
T Consensus 349 a~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v------------------r~~G~~~~i~l~~~~~~~~~~~ 410 (457)
T 3tfu_A 349 SVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDV------------------RVCGAIGVIECDRPVDLAVATP 410 (457)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEE------------------EECSSCEEEEESSCCCHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeee------------------ecCCeEEEEEECCcccHHHHHH
Confidence 776666542 33556667777888888764 232211 2356788888754333567777
Q ss_pred cCCcceeecc
Q 019543 271 TTKYFSITVS 280 (339)
Q Consensus 271 ~L~~~~i~v~ 280 (339)
.|.+.|+.++
T Consensus 411 ~l~~~Gv~v~ 420 (457)
T 3tfu_A 411 AALDRGVWLR 420 (457)
T ss_dssp HHHHTTEECC
T ss_pred HHHHCCeEEE
Confidence 7766677554
No 177
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.65 E-value=5.2e-15 Score=141.83 Aligned_cols=236 Identities=14% Similarity=0.118 Sum_probs=149.5
Q ss_pred CCCCchHHHHHHHHHhHhC--CCeEEEcCcHHHHHHHHHH-h---cC----CCCEEEEcCCCccch--------------
Q 019543 51 RSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTH-L---LG----TGEEIVAGDDLYGGT-------------- 106 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~g--~~~~l~~~sG~~A~~~il~-l---l~----~GD~Vi~~~~~y~~~-------------- 106 (339)
++.++...+++++++++++ .+++++++||++|+.+++. + .+ |||+|++.++.|++.
T Consensus 82 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~ 161 (429)
T 1s0a_A 82 GITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSM 161 (429)
T ss_dssp SEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTT
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhh
Confidence 3345678899999999994 5688899999999975443 2 23 699999988776531
Q ss_pred ---------------------------H------HHHH-----------------------------HHHHHHHHHcCCE
Q 019543 107 ---------------------------D------RLLS-----------------------------RKIAEMAHAHGAL 124 (339)
Q Consensus 107 ---------------------------~------~~~~-----------------------------~~I~~la~~~g~~ 124 (339)
. ..++ ++|.++|++||++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~ 241 (429)
T 1s0a_A 162 HSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGIL 241 (429)
T ss_dssp GGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCE
T ss_pred cccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 0 0110 8899999999999
Q ss_pred EEEeCCcC-CCCCcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH-----HhcCCCCChHHH
Q 019543 125 LLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-----NAEGSGLAPFDC 193 (339)
Q Consensus 125 livD~a~a-~g~~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-----~~~~~~~~~~~a 193 (339)
+|+||+|+ .+..+. ......|++ |+||.+++ |-...|++++++ ++++.+.... ...+...++...
T Consensus 242 li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~~-G~~~iG~~~~~~-~~~~~l~~~~~~~~~~~~t~~~n~~~~ 317 (429)
T 1s0a_A 242 LIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALTG-GTMTLSATLTTR-EVAETISNGEAGCFMHGPTFMGNPLAC 317 (429)
T ss_dssp EEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-SSSCCEEEEECH-HHHHHHHTSTTSSCSCCCTTTTCHHHH
T ss_pred EEEeehhhCCcccchHHHhhhcCCCCCEE--EecccccC-CCccceEEEeCH-HHHHHhhcCCCcccccCCCCCCCHHHH
Confidence 99999996 432221 112345765 68899985 313456777764 6666665310 011234566666
Q ss_pred HHHHhchhhH--HHHHHHHHHHHHHHHHHHhCC---CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHH
Q 019543 194 WICLRGVKTM--ALRVEKQQDNAQKIAEFLASH---PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHV 268 (339)
Q Consensus 194 ~~~~~~l~~~--~~r~~~~~~~a~~l~~~L~~~---~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~ 268 (339)
+.+...++.+ +...++..++.+++.+.|+++ +.+..+ .+.+.+++|.+.+.....++
T Consensus 318 ~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~l 379 (429)
T 1s0a_A 318 AAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADV------------------RVLGAIGVVETTHPVNMAAL 379 (429)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGGCTTEEEE------------------EEETTEEEEEESSCBCHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCEEEE------------------EEeeEEEEEEECCcccHHHH
Confidence 5555555543 234556667788888888764 333211 12456788887532234466
Q ss_pred HccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 269 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 269 ~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.+.|...|+.++. ..+.||||++...+++.++.+.++|++
T Consensus 380 ~~~l~~~Gi~v~~----------------------------~~~~iRis~~~~~t~e~i~~~~~~l~~ 419 (429)
T 1s0a_A 380 QKFFVEQGVWIRP----------------------------FGKLIYLMPPYIILPQQLQRLTAAVNR 419 (429)
T ss_dssp HHHHHHTTEECCC----------------------------BTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEec----------------------------cCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 6666666776541 025799998877776666666666653
No 178
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.65 E-value=5.1e-15 Score=150.70 Aligned_cols=174 Identities=14% Similarity=0.067 Sum_probs=120.0
Q ss_pred CchHHHHHHHHHhHhCCCeEEEcCcHH-HHHHH-HHHhcCCCCEEEEcCCCccch-------------------------
Q 019543 54 NPTRDALESLLAKLDKADRALCFTSGM-AALAA-VTHLLGTGEEIVAGDDLYGGT------------------------- 106 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~~~l~~~sG~-~A~~~-il~ll~~GD~Vi~~~~~y~~~------------------------- 106 (339)
.+.++++|+.+|+++|++.++++++|+ +|+.+ +.++++|||+|+++.+.|...
T Consensus 172 ~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~i~ 251 (730)
T 1c4k_A 172 EGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFI 251 (730)
T ss_dssp BTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTCCE
T ss_pred hHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCccccCcc
Confidence 457899999999999999999888885 78875 556899999999987654211
Q ss_pred -------------HHH----------H----H----------------HHHHHHHHHcCCEEEEeCCcCCCC-Cc-----
Q 019543 107 -------------DRL----------L----S----------------RKIAEMAHAHGALLLVDNSIMSPV-LS----- 137 (339)
Q Consensus 107 -------------~~~----------~----~----------------~~I~~la~~~g~~livD~a~a~g~-~~----- 137 (339)
... . + ++|+++|++||++|++|++|+.+. +.
T Consensus 252 g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~~~g 331 (730)
T 1c4k_A 252 GGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRN 331 (730)
T ss_dssp EEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGG
T ss_pred CCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcccCC
Confidence 111 1 3 999999999999999999997542 11
Q ss_pred -CcccC---CCe----EEEeccccccccCCCceEEEEEEcChhH--------HHHHHHHHH-hcCCCCChHHHHH---HH
Q 019543 138 -RPLEL---GAD----IVMHSATKFIAGHSDVMAGVLAVKGERL--------AKELYFLQN-AEGSGLAPFDCWI---CL 197 (339)
Q Consensus 138 -~~~~~---~~D----i~~~S~sK~l~g~~~~~gG~v~~~~~~l--------~~~l~~~~~-~~~~~~~~~~a~~---~~ 197 (339)
.++.. ++| ++++|+||+++|+. .||+++.+++.+ ...+..... ..++..+....+. +.
T Consensus 332 ~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~--~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~aA~ 409 (730)
T 1c4k_A 332 SSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNA 409 (730)
T ss_dssp GCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHH
T ss_pred cCcccccccCCCCCCEEEEECCCCCCCCCC--CEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHHHHH
Confidence 12322 677 99999999998653 478887765432 123333322 2344444433222 22
Q ss_pred hchh--hHHHHHHHHHHHHHHHHHHHhC-CCCceE
Q 019543 198 RGVK--TMALRVEKQQDNAQKIAEFLAS-HPRVKK 229 (339)
Q Consensus 198 ~~l~--~~~~r~~~~~~~a~~l~~~L~~-~~~i~~ 229 (339)
..++ ...+++++..++++++++.|++ .++++.
T Consensus 410 ~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v 444 (730)
T 1c4k_A 410 AMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRP 444 (730)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEE
Confidence 2222 2456788888999999999988 677653
No 179
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.65 E-value=6.1e-15 Score=141.06 Aligned_cols=167 Identities=15% Similarity=0.086 Sum_probs=106.2
Q ss_pred HHHHHHHHHhHhC--------CC--eEEEcCcHHHHHHHH---HHhcCCCCEEEEcCCCccchHHHHH------------
Q 019543 57 RDALESLLAKLDK--------AD--RALCFTSGMAALAAV---THLLGTGEEIVAGDDLYGGTDRLLS------------ 111 (339)
Q Consensus 57 ~~~le~~la~~~g--------~~--~~l~~~sG~~A~~~i---l~ll~~GD~Vi~~~~~y~~~~~~~~------------ 111 (339)
..+|++.++++++ .+ +++++++|++|+..+ +++++|||+|+++++.|.+....+.
T Consensus 94 ~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~ 173 (420)
T 4f4e_A 94 IAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYY 173 (420)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECE
T ss_pred cHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeee
Confidence 4456666665542 23 567777779999754 3568999999999998876543332
Q ss_pred --------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC-----c---
Q 019543 112 --------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-----P--- 139 (339)
Q Consensus 112 --------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~-----~--- 139 (339)
++|+++|++||+++|+|++|+...... .
T Consensus 174 ~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 253 (420)
T 4f4e_A 174 DAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRL 253 (420)
T ss_dssp ETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHH
T ss_pred ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHH
Confidence 789999999999999999996544321 1
Q ss_pred c--cCCCeEEEeccccccccCCCceEEEEE--EcChhHHHHHH-HHH---HhcCCCCChHHHHHHHhch----------h
Q 019543 140 L--ELGADIVMHSATKFIAGHSDVMAGVLA--VKGERLAKELY-FLQ---NAEGSGLAPFDCWICLRGV----------K 201 (339)
Q Consensus 140 ~--~~~~Di~~~S~sK~l~g~~~~~gG~v~--~~~~~l~~~l~-~~~---~~~~~~~~~~~a~~~~~~l----------~ 201 (339)
+ ..+.+++++|+||.++.+|..+ |+++ .+++++++.+. ... +......+...++.+...+ +
T Consensus 254 ~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 332 (420)
T 4f4e_A 254 FAAANLNVFVSSSFSKSFSLYGERV-GALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQ 332 (420)
T ss_dssp HHHTTCCEEEEEECTTTTTCGGGCE-EEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHhcCCCEEEEEeCCccCcCcCCCc-EEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHH
Confidence 1 1244699999999999766554 5553 33445554432 222 2222233444333322222 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCC
Q 019543 202 TMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 202 ~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
.++...++..++.+++.+.|+++
T Consensus 333 ~~~~~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 333 ELGEMRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 24555666778888888888876
No 180
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.65 E-value=7.9e-15 Score=140.62 Aligned_cols=242 Identities=13% Similarity=0.118 Sum_probs=142.9
Q ss_pred CCCCchHHHHHHHHHhHhC--CCeEEEcCcHHHHHHHHHH-hc--------CCCCEEEEcCCCccchH------------
Q 019543 51 RSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTH-LL--------GTGEEIVAGDDLYGGTD------------ 107 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~g--~~~~l~~~sG~~A~~~il~-ll--------~~GD~Vi~~~~~y~~~~------------ 107 (339)
++.++..++|+++++++++ .+++++++||++|+..++. +. .++|+|++.++.|++..
T Consensus 68 ~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~ 147 (430)
T 3i4j_A 68 QFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGAR 147 (430)
T ss_dssp TCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-----------------
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCcccc
Confidence 3456788999999999995 4688899999999985443 33 45789998877665321
Q ss_pred ---------------------------------HHH-----H-------------------------HHHHHHHHHcCCE
Q 019543 108 ---------------------------------RLL-----S-------------------------RKIAEMAHAHGAL 124 (339)
Q Consensus 108 ---------------------------------~~~-----~-------------------------~~I~~la~~~g~~ 124 (339)
..+ . ++|.++|++||++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 227 (430)
T 3i4j_A 148 RELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGII 227 (430)
T ss_dssp --------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCE
T ss_pred ccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 011 1 8899999999999
Q ss_pred EEEeCCcC-CCCCcCc-----c-cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH----HHhcCCCCChHHH
Q 019543 125 LLVDNSIM-SPVLSRP-----L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL----QNAEGSGLAPFDC 193 (339)
Q Consensus 125 livD~a~a-~g~~~~~-----~-~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~----~~~~~~~~~~~~a 193 (339)
||+||+|. .+..+.. . ....|++ +|||++++ |-...|+++++ +++++.+... ....+...+++.+
T Consensus 228 li~DEv~~~~~~~g~~~~~~~~~~~~~di~--t~sK~l~~-G~~r~G~~~~~-~~i~~~~~~~~~~~~~~~t~~~~~~~~ 303 (430)
T 3i4j_A 228 FIADEVMSGMGRCGSPLALSRWSGVTPDIA--VLGKGLAA-GYAPLAGLLAA-PQVYETVMGGSGAFMHGFTYAGHPVSV 303 (430)
T ss_dssp EEEECTTTTTTTTSSSSGGGGTTTCCCSEE--EECGGGTT-TSSCCEEEEEC-HHHHHHHHHTTCBCCCCCTTTTCHHHH
T ss_pred EEEechhhCCCcccchhhhhhhcCCCCcEE--EEcccccC-CccccEEEEEC-HHHHHHHhccCCcccccCCCCCCHHHH
Confidence 99999986 3322211 1 2224555 57899995 40334677775 4677777653 1123355677776
Q ss_pred HHHHhchhhH--HHHHHHHHHHHHHHHHHHh----CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH-----
Q 019543 194 WICLRGVKTM--ALRVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL----- 262 (339)
Q Consensus 194 ~~~~~~l~~~--~~r~~~~~~~a~~l~~~L~----~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~----- 262 (339)
++++..|+.+ +...++.+++.+++.+.|+ .++.+..+. +.|.++++.+.+.
T Consensus 304 aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------------~~g~~~~~~~~~~~~~~~ 365 (430)
T 3i4j_A 304 AAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQVR------------------GTGLLLGVVLGDLATGQA 365 (430)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE------------------EETTEEEEEEC-------
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE------------------EEEEEEEEEeccccccCC
Confidence 6666666543 2234455555555555554 345443221 2466888876432
Q ss_pred ----HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 263 ----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 263 ----~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
+.+.++.+.|.+.|+.+..+.. +.. |..++.+||++.+..+++.++.+.++|
T Consensus 366 ~~~~~~~~~~~~~l~~~Gv~v~~~~~------~~~--------------~~~~~~iRi~~~~~~t~e~i~~~l~~l 421 (430)
T 3i4j_A 366 FETPGIASRIGAAALKRGLITYPGSG------AEP--------------NGRGDHLLLGPPLSITAAEVDGLLALL 421 (430)
T ss_dssp -----CHHHHHHHHHHTTEECC-------------------------------CEEEECCCTTCCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHhCCCEEEeccc------ccC--------------CCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 1235677777777887764321 100 113578999977555444444444433
No 181
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.64 E-value=9.1e-15 Score=139.93 Aligned_cols=231 Identities=14% Similarity=0.118 Sum_probs=149.7
Q ss_pred cCCCCchHHHHHHHHHhHhCC---CeEEEcCcHHHHHHHHHH-hcC-CCCEEEEcCCCccc-------------------
Q 019543 50 TRSGNPTRDALESLLAKLDKA---DRALCFTSGMAALAAVTH-LLG-TGEEIVAGDDLYGG------------------- 105 (339)
Q Consensus 50 ~r~~~~~~~~le~~la~~~g~---~~~l~~~sG~~A~~~il~-ll~-~GD~Vi~~~~~y~~------------------- 105 (339)
+++.++...++++++++++|. +++++++||++|+..++. +.. +||+|++.++.|++
T Consensus 81 ~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~ 160 (419)
T 2eo5_A 81 NDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIV 160 (419)
T ss_dssp SCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSS
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCcccccccc
Confidence 345567889999999999985 467888889999986543 322 39999998776641
Q ss_pred --------------------------------------hH-HHH------H------------------------HHHHH
Q 019543 106 --------------------------------------TD-RLL------S------------------------RKIAE 116 (339)
Q Consensus 106 --------------------------------------~~-~~~------~------------------------~~I~~ 116 (339)
.. ..+ . ++|.+
T Consensus 161 ~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~ 240 (419)
T 2eo5_A 161 GPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQK 240 (419)
T ss_dssp CCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHH
T ss_pred CCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHH
Confidence 00 111 2 89999
Q ss_pred HHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCC-CceEEEEEEcChhHHHHHHHHHHhcCCCCC
Q 019543 117 MAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHS-DVMAGVLAVKGERLAKELYFLQNAEGSGLA 189 (339)
Q Consensus 117 la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~-~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~ 189 (339)
+|++||+++|+||+|. .+..+.. .....|++ ||||.+++ | .. .|++++++ +++ .+ ......+...+
T Consensus 241 l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~-G~~r-iG~~~~~~-~~~-~~-~~~~~~t~~~n 313 (419)
T 2eo5_A 241 LAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALGG-GIMP-IGATIFRK-DLD-FK-PGMHSNTFGGN 313 (419)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TTSC-CEEEEEEG-GGC-CC-------CCCCC
T ss_pred HHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE--EecccccC-Cccc-eEEEEEch-Hhh-cC-CcccCCCCCCC
Confidence 9999999999999996 4332221 12234655 78999995 4 44 46676765 455 44 21222345567
Q ss_pred hHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-CHHHHHHH
Q 019543 190 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHV 268 (339)
Q Consensus 190 ~~~a~~~~~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-~~~~~~~~ 268 (339)
+...+.+...|+.+....++.+++.+++.+.|+++ +..+ .+.|.+++|.+. +..... +
T Consensus 314 ~~~~~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~--~~~~------------------~~~g~~~~i~~~~~~~~~~-~ 372 (419)
T 2eo5_A 314 ALACAIGSKVIDIVKDLLPHVNEIGKIFAEELQGL--ADDV------------------RGIGLAWGLEYNEKKVRDR-I 372 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--SSEE------------------EEETTEEEEECSCHHHHHH-H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhe------------------EeeeEEEEEEEecCccHHH-H
Confidence 77776666667665556666778888888888765 2211 124678888874 323355 7
Q ss_pred HccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 269 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 269 ~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.+.|...|+.++.+ .++.||||+++..+++.++.+.++|+
T Consensus 373 ~~~l~~~Gv~v~~~---------------------------~~~~lRis~~~~~t~e~i~~~l~~l~ 412 (419)
T 2eo5_A 373 IGESFKRGLLLLPA---------------------------GRSAIRVIPPLVISEEEAKQGLDILK 412 (419)
T ss_dssp HHHHHHTTEECEEE---------------------------TTTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEecC---------------------------CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 77776777765532 13679999887665555555555544
No 182
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.64 E-value=4.6e-15 Score=140.52 Aligned_cols=251 Identities=19% Similarity=0.177 Sum_probs=152.5
Q ss_pred CCCcccCC--CCchHHHHHH----HHHhHhCCCeE-----EEcCcHHHHHHH-HHHhcCCCCEEEEcCCCccchH-----
Q 019543 45 GPYDYTRS--GNPTRDALES----LLAKLDKADRA-----LCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTD----- 107 (339)
Q Consensus 45 ~~~~y~r~--~~~~~~~le~----~la~~~g~~~~-----l~~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~----- 107 (339)
.+|...|+ +...++++|. +..++||++++ +=..||+.||.+ .+++++|||.|+..+...+|..
T Consensus 84 EGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~ 163 (490)
T 3ou5_A 84 EGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYM 163 (490)
T ss_dssp CC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC------------
T ss_pred CCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCccccccc
Confidence 34555554 5567777775 45678998875 556799999986 5569999999998776433321
Q ss_pred ----------HHHH-------------------------------------------HHHHHHHHHcCCEEEEeCCc---
Q 019543 108 ----------RLLS-------------------------------------------RKIAEMAHAHGALLLVDNSI--- 131 (339)
Q Consensus 108 ----------~~~~-------------------------------------------~~I~~la~~~g~~livD~a~--- 131 (339)
.+++ +++.++|++.|++|++|-+|
T Consensus 164 ~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaG 243 (490)
T 3ou5_A 164 SDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISG 243 (490)
T ss_dssp ----------------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHH
T ss_pred CCCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhh
Confidence 0001 99999999999999999999
Q ss_pred --CCCCCcCcccCCCeEEEeccccccccCCCceEEEEEEcCh--------------hHHHHHHHHHHhcCCCCCh---HH
Q 019543 132 --MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------RLAKELYFLQNAEGSGLAP---FD 192 (339)
Q Consensus 132 --a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~--------------~l~~~l~~~~~~~~~~~~~---~~ 192 (339)
+.|.+.+|++. +||+++|.+|+|.|| +||+|.++++ ++.+++.... +.|..-.| ..
T Consensus 244 LVA~g~~psP~~~-ADvVTtTTHKTLrGP---rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aV-FPg~qggp~~h~I 318 (490)
T 3ou5_A 244 LVAAKVIPSPFKH-ADIVTTTTHKTLRGA---RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAV-FPSLQGGPHNHAI 318 (490)
T ss_dssp HHHTTSSCCGGGT-CSEEEEESSSTTCSC---SCEEEEEECSEEEECC--CCEEECCCHHHHHHHH-TTTTCSSCCHHHH
T ss_pred hhcccccCCcccc-ceEEeccccccccCC---CceEEEeccccccccccccchhHHHHHHHHHhhc-CccccccchHHHH
Confidence 45677888886 899999999999976 5899998863 3445554432 22322223 22
Q ss_pred HHHHH----hchhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHH-HHHH
Q 019543 193 CWICL----RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA-LSKH 267 (339)
Q Consensus 193 a~~~~----~~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~-~~~~ 267 (339)
++.+. ..-..+....++..+|++.|++.|.+. +++.|. + ....+++.+.+.+.. ...+
T Consensus 319 AAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvs--G--------------gTdnHlvLvDl~~~g~tG~~ 381 (490)
T 3ou5_A 319 AAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVS--G--------------GTDNHLVLVDLRPKGLDGAR 381 (490)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGG--G--------------SCSSSEEEEECGGGTCCHHH
T ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeec--C--------------CCCceEEEEeccccCCCHHH
Confidence 33222 122346778888899999999999876 333332 1 235678877763221 1223
Q ss_pred HHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe--------ccCCHHHHHHHHHHHHh
Q 019543 268 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--------GIEDVNDLISDLDKALR 335 (339)
Q Consensus 268 ~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv--------g~e~~~~li~~l~~al~ 335 (339)
..+.|...+|.++-- ..|.- +....++-|||.. +.++++++.+-|.++|.
T Consensus 382 ae~~Le~agItvNkN------~iP~D------------~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 382 AERVLELVSITANKN------TCPGD------------RSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp HHHHHHHTTEECEEE------CCTTC------------CCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCcEECCC------CCCCC------------CCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 333444556665521 01210 0002345689875 44677777777777764
No 183
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.64 E-value=5.5e-15 Score=137.38 Aligned_cols=239 Identities=12% Similarity=0.044 Sum_probs=151.1
Q ss_pred CcccCCCCchHHHHHHHHHhHhCCC--eEEEcCcHHHHHHHHH-HhcCCCCEEEEcCCCccchHH---------------
Q 019543 47 YDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HLLGTGEEIVAGDDLYGGTDR--------------- 108 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~la~~~g~~--~~l~~~sG~~A~~~il-~ll~~GD~Vi~~~~~y~~~~~--------------- 108 (339)
|.++++..+..+++++++++++|.+ ++++++||++|+..++ .++++||+|+++++.|++...
T Consensus 41 ~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 120 (359)
T 1svv_A 41 QHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAP 120 (359)
T ss_dssp CCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEEC
T ss_pred ccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEe
Confidence 5555566788999999999999864 5788889999998654 478899999999887654321
Q ss_pred -------------HH-----------H-------------------HHHHHHHHHcCCEEEEeCCc---CCCCCcCcc--
Q 019543 109 -------------LL-----------S-------------------RKIAEMAHAHGALLLVDNSI---MSPVLSRPL-- 140 (339)
Q Consensus 109 -------------~~-----------~-------------------~~I~~la~~~g~~livD~a~---a~g~~~~~~-- 140 (339)
.+ + ++|.++|++||+++|+|++| +.+......
T Consensus 121 ~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 200 (359)
T 1svv_A 121 CPDGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTL 200 (359)
T ss_dssp CTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCH
T ss_pred CCCCeecHHHHHHHHHHHHhccCCCceEEEEEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhh
Confidence 00 0 78999999999999999999 433322111
Q ss_pred ---cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCC--ChHHHHHHHhch--hhHHHHHHHHHHH
Q 019543 141 ---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGV--KTMALRVEKQQDN 213 (339)
Q Consensus 141 ---~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~--~~~~a~~~~~~l--~~~~~r~~~~~~~ 213 (339)
....|+++.|++|+ +++ ...|++++++ ++.+.++......+... +..........+ +.++...++..++
T Consensus 201 ~~~~~~~d~~~~s~~K~-g~~--~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 276 (359)
T 1svv_A 201 ADIARLTDMFYIGATKA-GGM--FGEALIILND-ALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKM 276 (359)
T ss_dssp HHHHHHCSEEEEECTTT-TCS--SCEEEEECSG-GGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHH
T ss_pred hhhhhcCCEEEEecccC-CCC--CceEEEEEcc-cHHHHHHHHHhcCCcccccchhhHHHHHHHHhhhhHHHHHHHHHHH
Confidence 13579999999997 432 2247887764 56666655432222211 211111111122 2345566777788
Q ss_pred HHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcc-eeecccCCcccceeccc
Q 019543 214 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPC 292 (339)
Q Consensus 214 a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~-~i~v~~G~~~s~~~~p~ 292 (339)
.+++.+.| +.++++. ..| ..+.++++.+. .++.+.|... |+.+ +|. .+
T Consensus 277 ~~~l~~~L-~~~~~~~-~~~----------------~~~~~~~~~~~-----~~~~~~l~~~~gi~v-~~~------~~- 325 (359)
T 1svv_A 277 AAILKAGL-EACGIRL-AWP----------------SASNQLFPILE-----NTMIAELNNDFDMYT-VEP------LK- 325 (359)
T ss_dssp HHHHHHHH-HHTTCCB-SSC----------------CSSSEECBEEE-----HHHHHHHTTTEECEE-EEE------ET-
T ss_pred HHHHHHHh-ccCCeEE-ccC----------------CccceEEEEcC-----HHHHHHHHHhcCEEE-Eec------cc-
Confidence 88888888 4555432 112 12445555553 2566666655 7766 221 01
Q ss_pred cccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 293 FMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 293 ~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
-.++.+|||++...+++.++.+.++|++
T Consensus 326 ----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 353 (359)
T 1svv_A 326 ----------------DGTCIMRLCTSWATEEKECHRFVEVLKR 353 (359)
T ss_dssp ----------------TTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred ----------------CCCceEEEEccCcCCHHHHHHHHHHHHH
Confidence 0246799999887777767777776654
No 184
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.64 E-value=5.6e-15 Score=145.30 Aligned_cols=247 Identities=11% Similarity=0.080 Sum_probs=154.6
Q ss_pred CcccCCCCchHHHHHHHH----HhHhCCC----eEEEcCcHHHHHHH-HHHhcC--------------CCCEEEEcCCCc
Q 019543 47 YDYTRSGNPTRDALESLL----AKLDKAD----RALCFTSGMAALAA-VTHLLG--------------TGEEIVAGDDLY 103 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~l----a~~~g~~----~~l~~~sG~~A~~~-il~ll~--------------~GD~Vi~~~~~y 103 (339)
+.|. .+|...++|+.+ ++++|.+ ..+++++|++|+.. +..+.. |+++|++++..|
T Consensus 125 ~~~~--~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H 202 (511)
T 3vp6_A 125 FTYE--IAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSH 202 (511)
T ss_dssp SCTT--TCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSC
T ss_pred CCcc--cCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCch
Confidence 4454 678877777765 5556754 57788888999864 333322 678999988766
Q ss_pred cchHHHHH---------------------------------------------------------HHHHHHHHHcCCEEE
Q 019543 104 GGTDRLLS---------------------------------------------------------RKIAEMAHAHGALLL 126 (339)
Q Consensus 104 ~~~~~~~~---------------------------------------------------------~~I~~la~~~g~~li 126 (339)
........ ++|+++|++||++++
T Consensus 203 ~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lh 282 (511)
T 3vp6_A 203 YSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLH 282 (511)
T ss_dssp THHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEE
Confidence 54332211 999999999999999
Q ss_pred EeCCcCCCCCcCc-----cc--CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH-Hhc-C------------
Q 019543 127 VDNSIMSPVLSRP-----LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAE-G------------ 185 (339)
Q Consensus 127 vD~a~a~g~~~~~-----~~--~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-~~~-~------------ 185 (339)
+|++|+.+....+ +. .++|+++++++|+++++.+ .|+++.+++.+........ .++ .
T Consensus 283 vD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 360 (511)
T 3vp6_A 283 VDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQ--CSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTG 360 (511)
T ss_dssp EEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCG
T ss_pred EEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcC--eEEEEEeCHHHHHHHhccCCccccCcccccccccCcc
Confidence 9999988765221 11 2569999999999987633 4667776655544432110 000 0
Q ss_pred -------CCCChHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEe--cCCCCCCCchHhHhhhcCCCcce
Q 019543 186 -------SGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVN--YAGLPEHPGHELHYSQAKGAGSV 254 (339)
Q Consensus 186 -------~~~~~~~a~~~~~--~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~--~p~~~~~~~~~~~~~~~~~~~~i 254 (339)
.....+..+.+++ +.+.+++++++..++++++++.|++.|+++.+. .| ..++
T Consensus 361 ~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p-----------------~~~~ 423 (511)
T 3vp6_A 361 DKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEP-----------------EHTN 423 (511)
T ss_dssp GGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCC-----------------SSSC
T ss_pred CCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCC-----------------CeEE
Confidence 0112233333333 445678889999999999999999998876443 12 3467
Q ss_pred EEEeeCCH----------------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe
Q 019543 255 LSFLTGSL----------------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 318 (339)
Q Consensus 255 vs~~~~~~----------------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv 318 (339)
+.|.+.+. ....++.+.|...|+.+.. ..+.. -..+.+|+++
T Consensus 424 v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~-------~~~~~---------------~~~~~lRi~~ 481 (511)
T 3vp6_A 424 VCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVG-------YQPQG---------------DKANFFRMVI 481 (511)
T ss_dssp EEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEE-------EEEET---------------TEEEEEEECC
T ss_pred EEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEE-------EEEeC---------------CceEEEEEEe
Confidence 77764211 1123566666665543210 01100 0124699999
Q ss_pred -ccCCHHHHHHHHHHHHhc
Q 019543 319 -GIEDVNDLISDLDKALRT 336 (339)
Q Consensus 319 -g~e~~~~li~~l~~al~~ 336 (339)
+...+++.|+.+.+++++
T Consensus 482 ~~~~~t~~di~~ll~~i~~ 500 (511)
T 3vp6_A 482 SNPAATQSDIDFLIEEIER 500 (511)
T ss_dssp CCTTCCHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHH
Confidence 566677777888877764
No 185
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.63 E-value=6.5e-15 Score=140.67 Aligned_cols=234 Identities=16% Similarity=0.205 Sum_probs=146.3
Q ss_pred CCchHHHHHHHHHhHh-C-C-CeEEEcCcHHHHHHHHH----HhcCCCCEEEEcCCCccchH------------------
Q 019543 53 GNPTRDALESLLAKLD-K-A-DRALCFTSGMAALAAVT----HLLGTGEEIVAGDDLYGGTD------------------ 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~-g-~-~~~l~~~sG~~A~~~il----~ll~~GD~Vi~~~~~y~~~~------------------ 107 (339)
..+...+|++.+++++ | . +++++++||++|+.+++ .+.++| +|++.++.|++..
T Consensus 82 ~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~ 160 (426)
T 1sff_A 82 AYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMG 160 (426)
T ss_dssp ECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSC
T ss_pred CCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccC
Confidence 4577899999999999 5 4 56788888999997543 356676 7777776553210
Q ss_pred ----------------------------HHH------H------------------------HHHHHHHHHcCCEEEEeC
Q 019543 108 ----------------------------RLL------S------------------------RKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 108 ----------------------------~~~------~------------------------~~I~~la~~~g~~livD~ 129 (339)
..+ . ++|.++|++||++||+|+
T Consensus 161 ~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De 240 (426)
T 1sff_A 161 LMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADE 240 (426)
T ss_dssp CCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 011 1 889999999999999999
Q ss_pred CcC-CCCCcCc--c---cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhhH
Q 019543 130 SIM-SPVLSRP--L---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM 203 (339)
Q Consensus 130 a~a-~g~~~~~--~---~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~~ 203 (339)
+|+ .+..+.. + ....|++ ||||++++ | ...|++++++ ++++.+.......+...++...+.+...|+.+
T Consensus 241 ~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-G-lriG~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~ 315 (426)
T 1sff_A 241 VQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-G-FPLAGVTGRA-EVMDAVAPGGLGGTYAGNPIACVAALEVLKVF 315 (426)
T ss_dssp TTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGT-S-SCCEEEEEEH-HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHH
T ss_pred hhhccCcccchhhhhhcCCCCCEE--EEcccccC-C-CceEEEEEcH-HHHhhhccCCcCcCCCCCHHHHHHHHHHHHHH
Confidence 997 2221211 1 2234654 88999996 5 4457888775 56655542111223455777666665555544
Q ss_pred HH--HHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC--------CHHHHHHHH
Q 019543 204 AL--RVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--------SLALSKHVV 269 (339)
Q Consensus 204 ~~--r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~--------~~~~~~~~~ 269 (339)
.. ..++..++.+++.+.|+. ++.+..+ .+.|.++++.+. +.....++.
T Consensus 316 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~l~ 377 (426)
T 1sff_A 316 EQENLLQKANDLGQKLKDGLLAIAEKHPEIGDV------------------RGLGAMIAIELFEDGDHNKPDAKLTAEIV 377 (426)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEE------------------EEETTEEEEEEBGGGCTTSBCHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EEEEEEEEEEEecCccccCCChHHHHHHH
Confidence 32 345556667777776654 3322111 124678888873 234456788
Q ss_pred ccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 270 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 270 ~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+.|...|+.++.|.. .++.+|||+++..+++.++.+.++|+
T Consensus 378 ~~l~~~gi~v~~~~~-------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~ 418 (426)
T 1sff_A 378 ARARDKGLILLSCGP-------------------------YYNVLRILVPLTIEDAQIRQGLEIIS 418 (426)
T ss_dssp HHHHHTTEECEEEST-------------------------TSCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHCCcEEecCCC-------------------------CCCEEEEECCccCCHHHHHHHHHHHH
Confidence 877777887664431 13679999986555555555555543
No 186
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.63 E-value=7.3e-15 Score=139.47 Aligned_cols=235 Identities=12% Similarity=0.043 Sum_probs=143.0
Q ss_pred chHHHHHHHHHhHhCCC---eEEE-cCcHHHHHHHHH-HhcCCC-CEEEEcCCCccc----hHHHH--H-----------
Q 019543 55 PTRDALESLLAKLDKAD---RALC-FTSGMAALAAVT-HLLGTG-EEIVAGDDLYGG----TDRLL--S----------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~-~~sG~~A~~~il-~ll~~G-D~Vi~~~~~y~~----~~~~~--~----------- 111 (339)
+..+++++++++++|.+ ++++ ++||++|+.+++ ++++|| |.| ....|.. ..... .
T Consensus 78 ~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~gv~~v--~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g 155 (398)
T 2fyf_A 78 NLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKRSLHL--TYGEFSAKFASAVSKNPFVGEPIIITSDPG 155 (398)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSCEEEE--ECSHHHHHHHHHHHHCTTSCCCEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCCeEEE--eCCHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence 35789999999999975 4555 688899998644 578888 554 3333311 01111 0
Q ss_pred -----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCce
Q 019543 112 -----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 162 (339)
Q Consensus 112 -----------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~~ 162 (339)
++|.++ +|+++++|++|+.+...-.+. ++|++++|+||+++++++
T Consensus 156 ~~~~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~-~~di~~~s~sK~~~~~gg-- 229 (398)
T 2fyf_A 156 SAPEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIA-ETDAYYFAPQKNFASDGG-- 229 (398)
T ss_dssp CCCCCCCCTTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGG-GCSEEEECTTSTTCSCSS--
T ss_pred CCCCccccCCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcc-cCcEEEEecCcccCCCCc--
Confidence 556555 899999999998765422222 479999999999997643
Q ss_pred EEEEEEcChhHHHHHHHHH----------------H----hcC-CCCChHHHHHHHhchhh------HHHHHHHHHHHHH
Q 019543 163 AGVLAVKGERLAKELYFLQ----------------N----AEG-SGLAPFDCWICLRGVKT------MALRVEKQQDNAQ 215 (339)
Q Consensus 163 gG~v~~~~~~l~~~l~~~~----------------~----~~~-~~~~~~~a~~~~~~l~~------~~~r~~~~~~~a~ 215 (339)
.|++++++ ++++.++..+ . ... .+.+....+.+..+++. ++.+.++..++++
T Consensus 230 ~g~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~ 308 (398)
T 2fyf_A 230 LWLAIMSP-AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQ 308 (398)
T ss_dssp EEEEEECH-HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred eEEEEECH-HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 46777764 6666664321 0 011 12333322222223322 4556777788899
Q ss_pred HHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcc-eEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccc
Q 019543 216 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM 294 (339)
Q Consensus 216 ~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~-ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~ 294 (339)
++.+.|+++++++. ..+. | .+.++ +++|.+++.....++.+.|...|+.++.|. .
T Consensus 309 ~l~~~L~~~~g~~~-~~~~----~---------~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~-------~--- 364 (398)
T 2fyf_A 309 RLYSWAQERPYTTP-FVTD----P---------GLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPY-------R--- 364 (398)
T ss_dssp HHHHHHHHSTTEEE-SCCS----G---------GGBCSSEEEEEECTTSCHHHHHHHHHHTTCBCCSCC-------T---
T ss_pred HHHHHHHHcCCcee-ccCC----h---------hhcCCcEEEEECCCCCCHHHHHHHHHHCCcEEecCc-------c---
Confidence 99999998877642 1110 1 01234 888888532234567777766687776431 0
Q ss_pred cCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 295 SHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 295 ~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
. ..++.+|||++...+++.++.+.++|+
T Consensus 365 ---~----------~~~~~iRis~~~~~t~e~i~~~~~~l~ 392 (398)
T 2fyf_A 365 ---K----------LGRNQLRVAMFPAVEPDDVSALTECVD 392 (398)
T ss_dssp ---T----------TCSSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred ---c----------CCCCEEEEEecCCCCHHHHHHHHHHHH
Confidence 0 124789999996555555555555554
No 187
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.63 E-value=2.2e-15 Score=149.01 Aligned_cols=104 Identities=15% Similarity=0.190 Sum_probs=73.7
Q ss_pred CeEEEcCcHHHHHHHHH-H-----hcCCCCEEEEcCCCccchHHHHH---------------------------------
Q 019543 71 DRALCFTSGMAALAAVT-H-----LLGTGEEIVAGDDLYGGTDRLLS--------------------------------- 111 (339)
Q Consensus 71 ~~~l~~~sG~~A~~~il-~-----ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------- 111 (339)
++++++++|++|+..++ . +++|||+|+++++.|.+....+.
T Consensus 165 ~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~ 244 (533)
T 3f6t_A 165 TDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPS 244 (533)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTT
T ss_pred ceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCC
Confidence 46777777799997544 3 68999999999998765432111
Q ss_pred ----------------------HHHHHHHH-HcCCEEEEeCCcCCCCCc-Ccc---cCCCeEEEeccccccccCCCceEE
Q 019543 112 ----------------------RKIAEMAH-AHGALLLVDNSIMSPVLS-RPL---ELGADIVMHSATKFIAGHSDVMAG 164 (339)
Q Consensus 112 ----------------------~~I~~la~-~~g~~livD~a~a~g~~~-~~~---~~~~Di~~~S~sK~l~g~~~~~gG 164 (339)
++|+++|+ +||+++|+|++|+..... ..+ ..+.+++++||||++|.+|. ..|
T Consensus 245 ~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-RiG 323 (533)
T 3f6t_A 245 IKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGW-RLG 323 (533)
T ss_dssp EEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGG-CEE
T ss_pred CeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCccc-ceE
Confidence 68999999 589999999999754331 111 12346999999999987664 456
Q ss_pred EEEEcChhHHH
Q 019543 165 VLAVKGERLAK 175 (339)
Q Consensus 165 ~v~~~~~~l~~ 175 (339)
+++++++.+.+
T Consensus 324 ~l~~~~~~~~~ 334 (533)
T 3f6t_A 324 VIALNEKNVFD 334 (533)
T ss_dssp EEEEESSCHHH
T ss_pred EEEECcHHHHH
Confidence 88887653333
No 188
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.63 E-value=9.6e-16 Score=143.00 Aligned_cols=236 Identities=14% Similarity=0.080 Sum_probs=146.0
Q ss_pred chHHHHHHHHHhHhCCC---eEEEcCcH-HHHHHH-HHHhcCC---CCEEEEcCCCccchH-------------------
Q 019543 55 PTRDALESLLAKLDKAD---RALCFTSG-MAALAA-VTHLLGT---GEEIVAGDDLYGGTD------------------- 107 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~~~sG-~~A~~~-il~ll~~---GD~Vi~~~~~y~~~~------------------- 107 (339)
+..+++++.+++++|.+ ++++++++ ++|+.+ +..++.+ ||+|+++.+.|....
T Consensus 48 ~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 127 (360)
T 1w23_A 48 EVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSY 127 (360)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTS
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHHHHHHHhCCeEEeecccccCc
Confidence 35789999999999975 45566666 889875 4456654 677776654332110
Q ss_pred -------H-HHH-------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCC
Q 019543 108 -------R-LLS-------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSD 160 (339)
Q Consensus 108 -------~-~~~-------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~ 160 (339)
. .+. . +|+++||++||+|++|+.+.....+. ..|++++|+||++++.|
T Consensus 128 ~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~---~i~~~~~~~li~D~a~~~~~~~~~~~-~~di~~~s~sK~~~~~G- 202 (360)
T 1w23_A 128 QSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ---NFPEINHAPLIADMSSDILSRPLKVN-QFGMIYAGAQKNLGPSG- 202 (360)
T ss_dssp CSCCCGGGCCCCTTEEEEEEESEETTTTEECS---SCCCCCSSCEEEECTTTTTSSCCCGG-GCSEEEEETTTTTSCTT-
T ss_pred CCccchHhhccCCCCCEEEEeCCCCCcceecc---cccccCCceEEEechhhcCCCCcCcc-cCCEEEEEcccccCCCC-
Confidence 0 010 3 45558999999999998775422222 23899999999998543
Q ss_pred ceEEEEEEcChhHHHHHHHHH-----------HhcC-CCCChHHHHHHHhchhh------HHHHHHHHHHHHHHHHHHHh
Q 019543 161 VMAGVLAVKGERLAKELYFLQ-----------NAEG-SGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 161 ~~gG~v~~~~~~l~~~l~~~~-----------~~~~-~~~~~~~a~~~~~~l~~------~~~r~~~~~~~a~~l~~~L~ 222 (339)
.|++++++ +++++++... .... .+.+....+.+..+++. ++.+.++..++++++.+.|+
T Consensus 203 --~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 279 (360)
T 1w23_A 203 --VTVVIVKK-DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTID 279 (360)
T ss_dssp --CEEEEEEH-HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred --cEEEEEcH-HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 36777764 4544433211 0011 23333333333333332 45567777888999999999
Q ss_pred CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHH
Q 019543 223 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 302 (339)
Q Consensus 223 ~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~ 302 (339)
+++++... +. .+. ...+.+++|.+++.....+|.+.|...|+.+..|..
T Consensus 280 ~~~~~~~~-~~----~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~------------------ 328 (360)
T 1w23_A 280 ESNGFYVG-HA----EKG--------SRSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGHR------------------ 328 (360)
T ss_dssp TTTTSSEE-SS----CGG--------GBCSSEEEEECSSHHHHHHHHHHHHHTTEESCBCCT------------------
T ss_pred HccCcccc-cC----Cch--------hccCcEEEEEcCCCccHHHHHHHHHHCCeeeecCCC------------------
Confidence 87653111 10 010 002348999887655567788888777877653321
Q ss_pred HHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 303 VRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 303 ~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.++.||||++..++++.++.+.++|++
T Consensus 329 -------~~~~iRis~~~~~~~~~i~~~~~~l~~ 355 (360)
T 1w23_A 329 -------SVGGCRASIYNAVPIDACIALRELMIQ 355 (360)
T ss_dssp -------TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred -------CCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 136799999987777777777777754
No 189
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.62 E-value=5.9e-15 Score=142.69 Aligned_cols=242 Identities=12% Similarity=0.004 Sum_probs=145.7
Q ss_pred HHHHHHHHhHhCCCe-------EEEcCcHHHHHHH-HHHhcC--------CC-----CEEEEcCCCccchHHHHH-----
Q 019543 58 DALESLLAKLDKADR-------ALCFTSGMAALAA-VTHLLG--------TG-----EEIVAGDDLYGGTDRLLS----- 111 (339)
Q Consensus 58 ~~le~~la~~~g~~~-------~l~~~sG~~A~~~-il~ll~--------~G-----D~Vi~~~~~y~~~~~~~~----- 111 (339)
+++.+.+++++|.+. ++++++|++|+.. +.++.. +| |+|++++ .|..+.....
T Consensus 84 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~ 162 (452)
T 2dgk_A 84 LRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVE 162 (452)
T ss_dssp HHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCce
Confidence 344555688888752 7888899999875 434432 55 6999988 6654432221
Q ss_pred --------------------------------------------HHHHHHHHHc------CCEEEEeCCcCCCCC---cC
Q 019543 112 --------------------------------------------RKIAEMAHAH------GALLLVDNSIMSPVL---SR 138 (339)
Q Consensus 112 --------------------------------------------~~I~~la~~~------g~~livD~a~a~g~~---~~ 138 (339)
++|.++|++| |+++++|++|+.++. ..
T Consensus 163 v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 242 (452)
T 2dgk_A 163 LREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAP 242 (452)
T ss_dssp EEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCT
T ss_pred EEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCc
Confidence 9999999996 999999999986542 11
Q ss_pred c--c---cCCCeEEEeccccccccCCCceEEEEEEcChhHH-HHHHHHHHhcC----------CCC--ChHHHHHHHhc-
Q 019543 139 P--L---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYFLQNAEG----------SGL--APFDCWICLRG- 199 (339)
Q Consensus 139 ~--~---~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~-~~l~~~~~~~~----------~~~--~~~~a~~~~~~- 199 (339)
. . ..++|++++|++|++.++. ..|+++++++.+. +.+.....+.+ ... .....+.++..
T Consensus 243 ~~~~~~~~~~~d~~~~~~hK~~~~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~l 320 (452)
T 2dgk_A 243 DIVWDFRLPRVKSISASGHKFGLAPL--GCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRL 320 (452)
T ss_dssp TCCCSTTSTTEEEEEEETTTTTCCCS--SCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHH
T ss_pred cchhhcCCCCCcEEEECcccccCCCC--CeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHH
Confidence 1 1 1268999999999876543 3678888764332 22211001111 111 11222333332
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH----HHHHHHHccCCc
Q 019543 200 -VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL----ALSKHVVETTKY 274 (339)
Q Consensus 200 -l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~----~~~~~~~~~L~~ 274 (339)
.+.+.++.++..++++++.+.|+++++++.+. |..+ ....+++.|.+.+. ....++.+.|..
T Consensus 321 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~------------~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~ 387 (452)
T 2dgk_A 321 GREGYTKVQNASYQVAAYLADEIAKLGPYEFIC-TGRP------------DEGIPAVCFKLKDGEDPGYTLYDLSERLRL 387 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEE-ECCT------------TTBSSEEEEEECTTCCCSCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEec-CCCC------------CCCeEEEEEEecCcccccCCHHHHHHHHHh
Confidence 24467778888899999999999998876543 3210 01457888887542 123567777776
Q ss_pred ceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 275 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 275 ~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
.|+.++. ...|.. + -....+|+|++..++++.++.+.++|+
T Consensus 388 ~Gi~v~~------~~~~~~-----~---------~~~~~lRis~~~~~t~e~id~li~~l~ 428 (452)
T 2dgk_A 388 RGWQVPA------FTLGGE-----A---------TDIVVMRIMCRRGFEMDFAELLLEDYK 428 (452)
T ss_dssp TTCBCCE------EECSTT-----C---------TTCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred cCCeeee------eeCCcc-----c---------CCeEEEEEEecCCCCHHHHHHHHHHHH
Confidence 6765542 111211 0 024589999997555544555444443
No 190
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.62 E-value=6.3e-15 Score=143.53 Aligned_cols=237 Identities=15% Similarity=0.111 Sum_probs=149.3
Q ss_pred ccCCCCchHHHHHHHHHhHhC--CCeEEEcCcHHHHHHHHHH-hcC--------CCCEEEEcCCCccch-----------
Q 019543 49 YTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTH-LLG--------TGEEIVAGDDLYGGT----------- 106 (339)
Q Consensus 49 y~r~~~~~~~~le~~la~~~g--~~~~l~~~sG~~A~~~il~-ll~--------~GD~Vi~~~~~y~~~----------- 106 (339)
+.++.++...+|+++|+++.+ .+.+++++||++|+..++. +.. +++.||+.++.|++.
T Consensus 93 ~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~ 172 (472)
T 3hmu_A 93 FFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMA 172 (472)
T ss_dssp SSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCH
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCCh
Confidence 334567888999999999985 4588999999999985443 332 468888877766531
Q ss_pred ------------------------------------HH----HHH-----------------------------HHHHHH
Q 019543 107 ------------------------------------DR----LLS-----------------------------RKIAEM 117 (339)
Q Consensus 107 ------------------------------------~~----~~~-----------------------------~~I~~l 117 (339)
.. .+. ++|.++
T Consensus 173 ~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l 252 (472)
T 3hmu_A 173 GMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRI 252 (472)
T ss_dssp HHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHH
T ss_pred hhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHH
Confidence 01 110 899999
Q ss_pred HHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH--HHhcCCCCC
Q 019543 118 AHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSGLA 189 (339)
Q Consensus 118 a~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~--~~~~~~~~~ 189 (339)
|++||++||+||+|. .|..+.. .....|++ +++|+++|.+..+ |++++++ ++++.+... ....+...+
T Consensus 253 ~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~--t~sK~l~gg~~pl-G~v~~~~-~i~~~~~~~~~~~~~t~~~n 328 (472)
T 3hmu_A 253 CDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM--TIAKGLSSGYAPI-GGSIVCD-EVAHVIGKDEFNHGYTYSGH 328 (472)
T ss_dssp HHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--EECGGGTTTSSCC-EEEEEEH-HHHHHHTTSCBCCCCTTTTC
T ss_pred HHHcCCEEEEEccccCCcccCccchhHHhCCCCcee--eechhhhcCCcce-EEEEECH-HHHHhcccCCccccCCCCCC
Confidence 999999999999995 4333221 12235776 4789998743344 5666664 677766211 111235567
Q ss_pred hHHHHHHHhchhhHH--HHHHHHH-HHHHHHHHHHhCC---CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--
Q 019543 190 PFDCWICLRGVKTMA--LRVEKQQ-DNAQKIAEFLASH---PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-- 261 (339)
Q Consensus 190 ~~~a~~~~~~l~~~~--~r~~~~~-~~a~~l~~~L~~~---~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-- 261 (339)
|+.++.++..|+.+. ...++.+ ++.+++.+.|+.+ +.+..+ ++.|.++.|.+..
T Consensus 329 p~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v------------------r~~G~~~~i~~~~~~ 390 (472)
T 3hmu_A 329 PVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEA------------------KIVGMMASIALTPNK 390 (472)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEE------------------EEETTEEEEEECSCG
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EecCceEEEEEecCc
Confidence 887777777776542 3455566 6677777777654 333222 2356788887642
Q ss_pred ----------HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHH
Q 019543 262 ----------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 331 (339)
Q Consensus 262 ----------~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~ 331 (339)
...+.++.+.|.+.|+.++.+ . +.|||++.+..+++.++.+.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~---------------------------g-~~iRi~p~~~~t~e~i~~~l 442 (472)
T 3hmu_A 391 ASRAKFASEPGTIGYICRERCFANNLIMRHV---------------------------G-DRMIISPPLVITPAEIDEMF 442 (472)
T ss_dssp GGTCCBSSCTTHHHHHHHHHHHHTTBCCEEE---------------------------T-TEEEECCCTTCCHHHHHHHH
T ss_pred cccccccchhHHHHHHHHHHHHHCCcEEEec---------------------------C-CEEEEECCCCCCHHHHHHHH
Confidence 122556777776666644311 1 67999977655555555554
Q ss_pred HHHh
Q 019543 332 KALR 335 (339)
Q Consensus 332 ~al~ 335 (339)
++|+
T Consensus 443 ~~l~ 446 (472)
T 3hmu_A 443 VRIR 446 (472)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 191
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.62 E-value=1.4e-14 Score=138.87 Aligned_cols=238 Identities=16% Similarity=0.149 Sum_probs=149.4
Q ss_pred CCCchHHHHHHHHHhHhC--CCeEEEcCcHHHHHHHHHH-hc--CCCCEEEEcCCCccch--------------------
Q 019543 52 SGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTH-LL--GTGEEIVAGDDLYGGT-------------------- 106 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g--~~~~l~~~sG~~A~~~il~-ll--~~GD~Vi~~~~~y~~~-------------------- 106 (339)
+.++...+|+++++++++ .+.+++++||++|+..++. +. ..+|+|++.++.|++.
T Consensus 82 ~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 161 (433)
T 1zod_A 82 MLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAA 161 (433)
T ss_dssp CCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCC
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCC
Confidence 345678999999999996 4678889999999986543 22 3468899888776420
Q ss_pred ---------------------------HH----HH-----H------------------------HHHHHHHHHcCCEEE
Q 019543 107 ---------------------------DR----LL-----S------------------------RKIAEMAHAHGALLL 126 (339)
Q Consensus 107 ---------------------------~~----~~-----~------------------------~~I~~la~~~g~~li 126 (339)
.. .+ . ++|.++|++||++||
T Consensus 162 ~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li 241 (433)
T 1zod_A 162 VGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLI 241 (433)
T ss_dssp TTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEE
T ss_pred CCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEE
Confidence 11 11 1 899999999999999
Q ss_pred EeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh--cCCCCChHHHHHHHh
Q 019543 127 VDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSGLAPFDCWICLR 198 (339)
Q Consensus 127 vD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--~~~~~~~~~a~~~~~ 198 (339)
+||+|+ .+..+.. .....|+ .|+||++++ | ...|++++++ ++++.+...... .+...+++..+++..
T Consensus 242 ~DEv~~~~g~~g~~~~~~~~~~~~di--~s~sK~~~~-G-~~ig~~~~~~-~~~~~~~~~~~~~~~t~~~~~~~~~a~~a 316 (433)
T 1zod_A 242 LDEAQTGVGRTGTMFACQRDGVTPDI--LTLSKTLGA-G-LPLAAIVTSA-AIEERAHELGYLFYTTHVSDPLPAAVGLR 316 (433)
T ss_dssp EECTTTTTTTTSSSSTHHHHTCCCSE--EEECHHHHT-T-SSCEEEEECH-HHHHHHHHTTCCCCCTTTTCHHHHHHHHH
T ss_pred EeccccCCCcCchHhHHhhcCCCCCE--EEecccccC-C-CCeeEEEEhH-HHHHhhccCCCCCCCCCCcCHHHHHHHHH
Confidence 999997 4332221 1223465 478999996 4 4457887764 677766542111 234456776665555
Q ss_pred chhhHH--HHHHHHHHHHHHHHHHHhC----CCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC--------HHH
Q 019543 199 GVKTMA--LRVEKQQDNAQKIAEFLAS----HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--------LAL 264 (339)
Q Consensus 199 ~l~~~~--~r~~~~~~~a~~l~~~L~~----~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~--------~~~ 264 (339)
.++.+. ...++.+++.+++.+.|++ ++.+..+ .+.|.+++|.+.+ ...
T Consensus 317 al~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~------------------~~~g~~~~i~~~~~~~~~~~~~~~ 378 (433)
T 1zod_A 317 VLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDV------------------RGRGLLLGVEIVKDRRTKEPADGL 378 (433)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EEETTEEEEEEEEETTTTEECTTH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------EEEEEEEEEEEecCccccCCChHH
Confidence 555432 2345556666777776654 2332211 1246788887632 123
Q ss_pred HHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 265 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 265 ~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..+|.+.|...|+.++.|..+ + .++.+||++.+..+++.++.+.++|+
T Consensus 379 ~~~~~~~l~~~Gv~v~~~~~~----------------------~-~~~~lRi~~~~~~t~~~i~~~l~~l~ 426 (433)
T 1zod_A 379 GAKITRECMNLGLSMNIVQLP----------------------G-MGGVFRIAPPLTVSEDEIDLGLSLLG 426 (433)
T ss_dssp HHHHHHHHHHTTEECCEECCT----------------------T-SCCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCeEeccCCC----------------------C-CCCEEEEECCcCCCHHHHHHHHHHHH
Confidence 566777776778776644310 1 23789999877666665555555554
No 192
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.62 E-value=8.6e-15 Score=142.70 Aligned_cols=234 Identities=19% Similarity=0.178 Sum_probs=149.1
Q ss_pred CCCCchHHHHHHHHHhHhC--CCeEEEcCcHHHHHHHHHH-hc--------CCCCEEEEcCCCccch-------------
Q 019543 51 RSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTH-LL--------GTGEEIVAGDDLYGGT------------- 106 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~g--~~~~l~~~sG~~A~~~il~-ll--------~~GD~Vi~~~~~y~~~------------- 106 (339)
.+.++...+|+++|+++++ .+.+++++||++|+..++. +. ..++.||+.++.|++.
T Consensus 93 ~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~ 172 (476)
T 3i5t_A 93 YMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGN 172 (476)
T ss_dssp TCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGG
T ss_pred ccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhh
Confidence 4567889999999999984 5789999999999985444 32 3367888777665421
Q ss_pred ----------------------------------H----HHHH-----------------------------HHHHHHHH
Q 019543 107 ----------------------------------D----RLLS-----------------------------RKIAEMAH 119 (339)
Q Consensus 107 ----------------------------------~----~~~~-----------------------------~~I~~la~ 119 (339)
. ..+. ++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~ 252 (476)
T 3i5t_A 173 WPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICE 252 (476)
T ss_dssp CTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHH
T ss_pred ccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHH
Confidence 1 1111 89999999
Q ss_pred HcCCEEEEeCCcC-CCCCcCc------ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH-------HhcC
Q 019543 120 AHGALLLVDNSIM-SPVLSRP------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-------NAEG 185 (339)
Q Consensus 120 ~~g~~livD~a~a-~g~~~~~------~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-------~~~~ 185 (339)
+||++||+||+|. .|..+.. .....|++ +++|++++ |-...|+++++ +++++.+.... ...+
T Consensus 253 ~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~--t~sK~l~~-G~~plg~v~~~-~~i~~~~~~~~~~~~~~~~~~t 328 (476)
T 3i5t_A 253 KHDILYISDEVVTGFGRCGEWFASEKVFGVVPDII--TFAKGVTS-GYVPLGGLAIS-EAVLARISGENAKGSWFTNGYT 328 (476)
T ss_dssp HTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEE--EECGGGGT-TSSCCEEEEEC-HHHHHTTSGGGCTTCEECCCCT
T ss_pred HcCCEEEEEecccCCccccCceeeecccCCCcchh--hhhhhhcC-CCcCeEEEEEC-HHHHHHHhcCCcccccccccCC
Confidence 9999999999995 3332221 12234766 57899986 31234567676 46776665421 1134
Q ss_pred CCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCCC---CceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC
Q 019543 186 SGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHP---RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 260 (339)
Q Consensus 186 ~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~~---~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~ 260 (339)
...+|+.+++++..|+.+. ...++.+++.+++.+.|+.+. .+..+ ++.|.++.|.+.
T Consensus 329 ~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v------------------~~~G~~~~i~~~ 390 (476)
T 3i5t_A 329 YSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAET------------------RSVGLVGCVQCL 390 (476)
T ss_dssp TTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEE------------------EEETTEEEEEEC
T ss_pred CCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------EecCceeEEEEe
Confidence 5667887777777776543 346667777888888887543 22211 235678888764
Q ss_pred CH-----------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHH
Q 019543 261 SL-----------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISD 329 (339)
Q Consensus 261 ~~-----------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~ 329 (339)
+. ..+.++++.|.+.|+.+. |. . +.|||++.+..+++.++.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----------~~-----------------g-~~iRi~p~l~~t~e~i~~ 442 (476)
T 3i5t_A 391 LDPTRADGTAEDKAFTLKIDERCFELGLIVR----------PL-----------------G-DLCVISPPLIISRAQIDE 442 (476)
T ss_dssp CC-----CCHHHHHHHHHHHHHHHHTTEECE----------EE-----------------T-TEEEECCCTTCCHHHHHH
T ss_pred cCccccccccchhHHHHHHHHHHHHCCCEEE----------ec-----------------C-CEEEEECCCCCCHHHHHH
Confidence 32 125567777766666543 10 1 679999766555554444
Q ss_pred HHHHH
Q 019543 330 LDKAL 334 (339)
Q Consensus 330 l~~al 334 (339)
+.++|
T Consensus 443 ~l~~l 447 (476)
T 3i5t_A 443 MVAIM 447 (476)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 193
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.62 E-value=1.3e-14 Score=142.05 Aligned_cols=241 Identities=12% Similarity=0.099 Sum_probs=144.1
Q ss_pred CCchHHHHHHH----HHhHhCC---CeEEEcCcHHHHHHHH-HH----hc---------CC------CC-EEEEcCCCcc
Q 019543 53 GNPTRDALESL----LAKLDKA---DRALCFTSGMAALAAV-TH----LL---------GT------GE-EIVAGDDLYG 104 (339)
Q Consensus 53 ~~~~~~~le~~----la~~~g~---~~~l~~~sG~~A~~~i-l~----ll---------~~------GD-~Vi~~~~~y~ 104 (339)
..|...++|+. +++++|. +.+++++||++|+..+ .. ++ ++ || +|++++..|.
T Consensus 134 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~ 213 (497)
T 2qma_A 134 QASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHF 213 (497)
T ss_dssp GCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCT
T ss_pred hChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchH
Confidence 45677777776 8889986 4678888899998743 32 12 13 46 7888776543
Q ss_pred chHHH------------------------------HH---------------------------HHHHHHHHHcCCEEEE
Q 019543 105 GTDRL------------------------------LS---------------------------RKIAEMAHAHGALLLV 127 (339)
Q Consensus 105 ~~~~~------------------------------~~---------------------------~~I~~la~~~g~~liv 127 (339)
..... +. ++|.++|++||+++++
T Consensus 214 s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~v 293 (497)
T 2qma_A 214 TVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHV 293 (497)
T ss_dssp HHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEE
Confidence 32211 10 9999999999999999
Q ss_pred eCCcCCCCCcCc----c-cC-CCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhc-C----------CC---
Q 019543 128 DNSIMSPVLSRP----L-EL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-G----------SG--- 187 (339)
Q Consensus 128 D~a~a~g~~~~~----~-~~-~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~-~----------~~--- 187 (339)
|++|+.+..... + .. ++|+++.|+||+++++. ..|+++++++...+.+.....+. + ..
T Consensus 294 D~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~--~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 371 (497)
T 2qma_A 294 DGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTI--SCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIAT 371 (497)
T ss_dssp EETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCS--SCEEEEESCGGGGGGGCC--------------------CC
T ss_pred ehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCc--ceEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCC
Confidence 999987654222 1 22 67999999999998764 34677776654333221111010 0 00
Q ss_pred ---CChHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH
Q 019543 188 ---LAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 262 (339)
Q Consensus 188 ---~~~~~a~~~~~--~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~ 262 (339)
...+..+.+++ +.+.+..+.++..++++++.+.|++.++++.+..| .+++++|.+.+.
T Consensus 372 ~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~v~f~~~~~ 434 (497)
T 2qma_A 372 TKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEP-----------------SLSTVLFRATHE 434 (497)
T ss_dssp SCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCC-----------------SSSEEEEEECCS
T ss_pred CCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCC-----------------CceEEEEEEcCC
Confidence 01122233333 23446677788889999999999998876543222 356899987432
Q ss_pred -----HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEe-ccCCHHHHHHHHHHHHh
Q 019543 263 -----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-GIEDVNDLISDLDKALR 335 (339)
Q Consensus 263 -----~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisv-g~e~~~~li~~l~~al~ 335 (339)
....++.+.|...|+.+..+ ... -..+.+|+|+ +...+++.++.+.++|+
T Consensus 435 ~~~~~~l~~~l~~~l~~~G~~~~~~---------~~~--------------~g~~~lRis~~~~~~t~edi~~~~~~l~ 490 (497)
T 2qma_A 435 TADLDELNKALRLEALTRGIAVLGE---------TIV--------------DGKTALKFTILNPCLTTSDFESLLSKIN 490 (497)
T ss_dssp SSCHHHHHHHHHHHHHHHTSCBCEE---------EEE--------------TTEEEEEEECCCTTCCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCEEEEe---------eEE--------------CCEEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 11335555565555543210 000 0235799998 55555555555555544
No 194
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.62 E-value=2.5e-14 Score=135.18 Aligned_cols=168 Identities=14% Similarity=0.099 Sum_probs=107.2
Q ss_pred HHHHHHHHHhHhC--------CC--eEEEcCcHHHHHHHH---HHhcCCCCEEEEcCCCccchHHHHH------------
Q 019543 57 RDALESLLAKLDK--------AD--RALCFTSGMAALAAV---THLLGTGEEIVAGDDLYGGTDRLLS------------ 111 (339)
Q Consensus 57 ~~~le~~la~~~g--------~~--~~l~~~sG~~A~~~i---l~ll~~GD~Vi~~~~~y~~~~~~~~------------ 111 (339)
..++++.++++++ .+ ++++++||++|+..+ +++++|||+|+++.+.|.+....++
T Consensus 72 ~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 151 (397)
T 3fsl_A 72 LNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWY 151 (397)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCE
T ss_pred hHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeee
Confidence 4566666666653 34 567777889999754 3468999999999998876543322
Q ss_pred --------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc---C--cc--
Q 019543 112 --------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS---R--PL-- 140 (339)
Q Consensus 112 --------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~---~--~~-- 140 (339)
++|+++|++||+++|+|++|+..... . .+
T Consensus 152 ~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 231 (397)
T 3fsl_A 152 DEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRA 231 (397)
T ss_dssp ETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHH
T ss_pred eccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHH
Confidence 68999999999999999999765442 1 11
Q ss_pred ---cCCCeEEEeccccccccCCCceEEEEEE--cChhHHHHHHH-HHH---hcCCCCChHHHHHH---Hhc-------hh
Q 019543 141 ---ELGADIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYF-LQN---AEGSGLAPFDCWIC---LRG-------VK 201 (339)
Q Consensus 141 ---~~~~Di~~~S~sK~l~g~~~~~gG~v~~--~~~~l~~~l~~-~~~---~~~~~~~~~~a~~~---~~~-------l~ 201 (339)
.....+++.|+||.++.+|.. .|++++ .+.++++.+.. ... ......+......+ +.. .+
T Consensus 232 ~~~~~~~~i~~~S~SK~~~~~G~r-iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 310 (397)
T 3fsl_A 232 IASAGLPALVSNSFSKIFSLYGER-VGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLK 310 (397)
T ss_dssp HHHTTCCEEEEEECTTTTTCGGGC-CEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHH
T ss_pred HHhcCCCEEEEecccccccCcCCC-eeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHH
Confidence 123468999999999866644 456653 34445544432 221 11222233332222 221 22
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCCC
Q 019543 202 TMALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 202 ~~~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
.++.+.++..++.+++.+.|++++
T Consensus 311 ~~~~~~~~~~~~~~~l~~~L~~~~ 334 (397)
T 3fsl_A 311 EVEEMRTRILAMRQELVKVLSTEM 334 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 345566677788888888888753
No 195
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.61 E-value=1.6e-15 Score=147.78 Aligned_cols=241 Identities=15% Similarity=0.135 Sum_probs=147.1
Q ss_pred chHHHHHHHHHhHhCCCeEEEc-CcHHHHHHH-HHH----hcCCCC-----EEEEcCCCccchHHHHH------------
Q 019543 55 PTRDALESLLAKLDKADRALCF-TSGMAALAA-VTH----LLGTGE-----EIVAGDDLYGGTDRLLS------------ 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~-~sG~~A~~~-il~----ll~~GD-----~Vi~~~~~y~~~~~~~~------------ 111 (339)
...+++++++++++|.+.++++ ++|++|+.+ ++. +.++|| +|+++++.|+.+...+.
T Consensus 107 ~l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~ 186 (474)
T 1wyu_B 107 RLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG 186 (474)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC
T ss_pred HHHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC
Confidence 3578899999999998876645 677888864 322 246898 99999987765543322
Q ss_pred ------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC--cCcccCCCeEEEecccc
Q 019543 112 ------------------------------------RKIAEMAHAHGALLLVDNSIMSPVL--SRPLELGADIVMHSATK 153 (339)
Q Consensus 112 ------------------------------------~~I~~la~~~g~~livD~a~a~g~~--~~~~~~~~Di~~~S~sK 153 (339)
++|+++|++||+++++|++|+.+.. .++...++|++++|+||
T Consensus 187 ~~~~~d~~~L~~~i~~~t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K 266 (474)
T 1wyu_B 187 PEGEVDLEALKRELGPHVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHK 266 (474)
T ss_dssp TTSSBCHHHHHHHCSTTEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTT
T ss_pred CCCCcCHHHHHHhhCCCceEEEEECCCCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCcc
Confidence 8999999999999999999976543 22334578999999999
Q ss_pred ccccC-C--CceEEEEEEcChhHHHHHHH-H------------------HHhcCCCCChHHHHHHHhch-----hhHHHH
Q 019543 154 FIAGH-S--DVMAGVLAVKGERLAKELYF-L------------------QNAEGSGLAPFDCWICLRGV-----KTMALR 206 (339)
Q Consensus 154 ~l~g~-~--~~~gG~v~~~~~~l~~~l~~-~------------------~~~~~~~~~~~~a~~~~~~l-----~~~~~r 206 (339)
+++++ | +...|++++++ ++++.+.. . ++......++..+..+...+ +.+.+.
T Consensus 267 ~~~~p~g~gG~~~G~~~~~~-~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~ 345 (474)
T 1wyu_B 267 TFTVPHGGGGPGSGPVGVKA-HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKA 345 (474)
T ss_dssp TTCCCCTTSCCCCCCEEECG-GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCeEEEEEcH-HHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99865 2 23467888876 55554431 0 00011123343333333333 335555
Q ss_pred HHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCccc
Q 019543 207 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKS 286 (339)
Q Consensus 207 ~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s 286 (339)
.++..++++++.+.|++. +++. .++. + ....+.+.+.......++.+.|...|+.+. +.
T Consensus 346 ~~~~~~~~~~l~~~L~~~-g~~~-~~~~----~-----------~~~~~~~~~~~~~~~~~l~~~L~~~Gi~~~-~~--- 404 (474)
T 1wyu_B 346 AALAVLNARYLKELLKEK-GYRV-PYDG----P-----------SMHEFVAQPPEGFRALDLAKGLLELGFHPP-TV--- 404 (474)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCBC-SSCS----S-----------CCSCEEEBCSTTCCHHHHHHHHHHTTCCCC-EE---
T ss_pred HHHHHHHHHHHHHHHhhc-CcEe-cCCC----C-----------cceEEEEEcCCCCCHHHHHHHHHHCCcccc-cc---
Confidence 777788899999999876 5432 1111 0 111123333211234566776655566431 10
Q ss_pred ceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 287 LISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 287 ~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
..|. ..++.+|||++..++++.++.+.++|+
T Consensus 405 --~~~~----------------~~~~~lRis~~~~~t~e~id~~~~~L~ 435 (474)
T 1wyu_B 405 --YFPL----------------IVKEALMVEPTETEAKETLEAFAEAMG 435 (474)
T ss_dssp --SCST----------------TSTTCEEECCCTTSCHHHHHHHHHHHH
T ss_pred --cccc----------------ccCCEEEEEeecCCCHHHHHHHHHHHH
Confidence 0110 124679999997655555566655554
No 196
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.61 E-value=3.8e-14 Score=134.87 Aligned_cols=170 Identities=11% Similarity=0.063 Sum_probs=110.6
Q ss_pred chHHHHHHHHHhHh-C-------CCeEEE--cCcHHHHHHHH---HHhcCCC-----CEEEEcCCCccchHHHHH-----
Q 019543 55 PTRDALESLLAKLD-K-------ADRALC--FTSGMAALAAV---THLLGTG-----EEIVAGDDLYGGTDRLLS----- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~-g-------~~~~l~--~~sG~~A~~~i---l~ll~~G-----D~Vi~~~~~y~~~~~~~~----- 111 (339)
+...+|++.+++++ + .+++++ ++||++|+.++ +.+++|| |+|+++.+.|++....+.
T Consensus 74 ~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~ 153 (412)
T 1ajs_A 74 LGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFK 153 (412)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCS
T ss_pred CCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCc
Confidence 44678999999887 4 257878 88889999754 2457899 999999887765431110
Q ss_pred ----------------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc--
Q 019543 112 ----------------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-- 137 (339)
Q Consensus 112 ----------------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-- 137 (339)
++|+++|++||+++|+|++|......
T Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~ 233 (412)
T 1ajs_A 154 DIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNL 233 (412)
T ss_dssp CEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCH
T ss_pred eeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcc
Confidence 68999999999999999998643322
Q ss_pred --C--ccc----C-CCeEEEeccccccccCCCceEEEEEE--cChh----HHHHHHHHHHhcCCCCChHHHHHHHhchh-
Q 019543 138 --R--PLE----L-GADIVMHSATKFIAGHSDVMAGVLAV--KGER----LAKELYFLQNAEGSGLAPFDCWICLRGVK- 201 (339)
Q Consensus 138 --~--~~~----~-~~Di~~~S~sK~l~g~~~~~gG~v~~--~~~~----l~~~l~~~~~~~~~~~~~~~a~~~~~~l~- 201 (339)
. ++. . ..++++.|+||.++++|. ..|++++ ++++ +.+.+...........++...+++...|+
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 312 (412)
T 1ajs_A 234 EKDAWAIRYFVSEGFELFCAQSFSKNFGLYNE-RVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSD 312 (412)
T ss_dssp HHHTHHHHHHHHTTCCEEEEEECTTTSCCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHS
T ss_pred cccchHHHHHhccCCcEEEEEecccccCCCCc-ceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcC
Confidence 1 111 1 124889999999997664 4567777 2344 33334332322223335554444443333
Q ss_pred ---------hHHHHHHHHHHHHHHHHHHHhCCC
Q 019543 202 ---------TMALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 202 ---------~~~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
.++...++..++.+++.+.|++++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1ajs_A 313 PELFHEWTGNVKTMADRILSMRSELRARLEALK 345 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 234456666777888888888753
No 197
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.61 E-value=2.9e-14 Score=135.77 Aligned_cols=170 Identities=14% Similarity=0.118 Sum_probs=111.4
Q ss_pred chHHHHHHHHHhHh-C-------CCeEEE--cCcHHHHHHHH---HHhcCCCCEEEEcCCCccchHHHHH----------
Q 019543 55 PTRDALESLLAKLD-K-------ADRALC--FTSGMAALAAV---THLLGTGEEIVAGDDLYGGTDRLLS---------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~-g-------~~~~l~--~~sG~~A~~~i---l~ll~~GD~Vi~~~~~y~~~~~~~~---------- 111 (339)
+...+|++.+++++ + .+++++ +++|++|+.++ +.++.|||+|+++++.|.+....++
T Consensus 73 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~ 152 (412)
T 1yaa_A 73 TGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYP 152 (412)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEE
T ss_pred CCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEe
Confidence 34667888888876 3 356777 88889998754 4466899999999988876543222
Q ss_pred ----------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC------c
Q 019543 112 ----------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR------P 139 (339)
Q Consensus 112 ----------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~------~ 139 (339)
++|+++|++||+++|+|++|+...... +
T Consensus 153 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 232 (412)
T 1yaa_A 153 YWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYA 232 (412)
T ss_dssp CEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHH
T ss_pred eecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHH
Confidence 689999999999999999996433221 1
Q ss_pred c----cCC----CeEEEeccccccccCCCceEEEEE--E----cChh----HHHHHHHHHHhcCCCCChHHHHHHHhchh
Q 019543 140 L----ELG----ADIVMHSATKFIAGHSDVMAGVLA--V----KGER----LAKELYFLQNAEGSGLAPFDCWICLRGVK 201 (339)
Q Consensus 140 ~----~~~----~Di~~~S~sK~l~g~~~~~gG~v~--~----~~~~----l~~~l~~~~~~~~~~~~~~~a~~~~~~l~ 201 (339)
+ ..+ .+++++|+||.++++|. ..|+++ + ++++ +.+.+...........++...+++...|+
T Consensus 233 ~~~~~~~~~~~~~~i~~~s~sK~~~~~Gl-riG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~ 311 (412)
T 1yaa_A 233 VRLGVEKLSTVSPVFVCQSFAKNAGMYGE-RVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLE 311 (412)
T ss_dssp HHHHHHHTTTTCCEEEEEECTTTSCCGGG-CEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCcceEEEeccCCCCCCcCC-cceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhC
Confidence 1 122 36889999999986564 456776 6 1344 55666554333233335544433333332
Q ss_pred ----------hHHHHHHHHHHHHHHHHHHHhCCC
Q 019543 202 ----------TMALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 202 ----------~~~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
.++...++..++.+++.+.|++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1yaa_A 312 TPELTEQWHKDMVTMSSRITKMRHALRDHLVKLG 345 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 234455666677888888887653
No 198
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.61 E-value=3.9e-15 Score=144.34 Aligned_cols=241 Identities=11% Similarity=0.052 Sum_probs=147.9
Q ss_pred hHHHHHHHHHhHhCCCe-EEEcCcHH-HHHHH-HHHhcC--CCCEEEEcCCCccchH-----------------------
Q 019543 56 TRDALESLLAKLDKADR-ALCFTSGM-AALAA-VTHLLG--TGEEIVAGDDLYGGTD----------------------- 107 (339)
Q Consensus 56 ~~~~le~~la~~~g~~~-~l~~~sG~-~A~~~-il~ll~--~GD~Vi~~~~~y~~~~----------------------- 107 (339)
..+++++++++++|.+. ++++++|+ +++.+ ++.+.. +||+|+++++.|....
T Consensus 134 ~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~ 213 (456)
T 2z67_A 134 LTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVY 213 (456)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEE
T ss_pred HHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCC
Confidence 45678899999999874 56677778 56653 333322 7888888776554322
Q ss_pred -------HHH-------H-------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-Cc-----ccCCCeEEE
Q 019543 108 -------RLL-------S-------------------RKIAEMAHAHGALLLVDNSIMSPVLS-RP-----LELGADIVM 148 (339)
Q Consensus 108 -------~~~-------~-------------------~~I~~la~~~g~~livD~a~a~g~~~-~~-----~~~~~Di~~ 148 (339)
..+ + ++|.++|++||+++++|+||+....+ .+ +..++|+++
T Consensus 214 ~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~ 293 (456)
T 2z67_A 214 VPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVV 293 (456)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEE
T ss_pred cCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCCEEE
Confidence 112 1 99999999999999999999755431 11 111789999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCC-Ch-HHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHhCC
Q 019543 149 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL-AP-FDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 149 ~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~-~~-~~a~~~~~~l--~~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
+|++|+++++ ..+|+++++++++.+.+.. .+.|... ++ ...+.++..+ +.++++.++..++++++.+.|+++
T Consensus 294 ~s~hK~~~~p--~g~G~l~~~~~~~~~~l~~--~~~g~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 369 (456)
T 2z67_A 294 SSSDKNLLTP--IGGGLVYSTDAEFIKEISL--SYPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDL 369 (456)
T ss_dssp EEHHHHHCCC--SSCEEEEESCHHHHHHHHT--TSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCcCCC--CCeEEEEEcCHHHHhhcCc--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998755 3468888866566665521 1233321 22 2222233322 345667778888899999999877
Q ss_pred C---CceEEecCCCCCCCchHhHhhhcCCCcceEEEee--CCHHHHHHHHccCCccee-ecccC---Ccccceecccccc
Q 019543 225 P---RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT--GSLALSKHVVETTKYFSI-TVSFG---SVKSLISMPCFMS 295 (339)
Q Consensus 225 ~---~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~--~~~~~~~~~~~~L~~~~i-~v~~G---~~~s~~~~p~~~~ 295 (339)
+ ++. +..| . ++++|.+ .+. ..++.+.|...++ +++.. +.+. ..++..
T Consensus 370 ~~~~g~~-v~~~-----------------~-~~v~~~~~~~~~--~~~l~~~L~~~gi~~~rv~~~~g~f~-G~~~~~-- 425 (456)
T 2z67_A 370 SKKTGGK-FLDV-----------------E-SPIASCISVNSD--PVEIAAKLYNLRVTGPRGIKKTDHFG-NCYLGT-- 425 (456)
T ss_dssp HHHSSCC-BCCC-----------------C-CSSEEEEECSSC--HHHHHHHHHHTTEESCEEECTTCHHH-HTCSSC--
T ss_pred ccccCCE-ecCC-----------------C-CeEEEEEecccH--HHHHHHHHHHcCCCcceEEeecCccc-cccccc--
Confidence 4 432 2111 2 4666766 432 2345555544443 11110 0000 011111
Q ss_pred CCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Q 019543 296 HASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 337 (339)
Q Consensus 296 h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~~ 337 (339)
...+.+|+|++..++++.++.+.++|+++
T Consensus 426 -------------~~~~~vr~s~~~~~t~eeid~~l~~L~~~ 454 (456)
T 2z67_A 426 -------------YTHDYIVMNAAIGVRTEDIVNSVSKLEKI 454 (456)
T ss_dssp -------------CSCCEEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred -------------cCcchhhhhhhcCCCHHHHHHHHHHHHHH
Confidence 12468999999998888899999999864
No 199
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.61 E-value=1e-14 Score=141.12 Aligned_cols=250 Identities=14% Similarity=0.079 Sum_probs=143.3
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHH-HHHhcCC-----C----CEEEEcCCCcc------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGT-----G----EEIVAGDDLYG------------------ 104 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~-il~ll~~-----G----D~Vi~~~~~y~------------------ 104 (339)
.++...+||+++++++|.+++++++||++|+.+ +..+.++ | |+|+++.+.|.
T Consensus 72 ~~~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~ 151 (467)
T 2oqx_A 72 GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYI 151 (467)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBC
T ss_pred cCchhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEecccccccchhhhhccCcceeeccc
Confidence 456788999999999999999999999999875 4446677 8 99887632210
Q ss_pred -------------c--hH----HHH------H-----------------------HHHHHHHHHcCCEEEEeCCcCC---
Q 019543 105 -------------G--TD----RLL------S-----------------------RKIAEMAHAHGALLLVDNSIMS--- 133 (339)
Q Consensus 105 -------------~--~~----~~~------~-----------------------~~I~~la~~~g~~livD~a~a~--- 133 (339)
+ .. ..+ + ++|+++|++||++||+|++|+.
T Consensus 152 ~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~ 231 (467)
T 2oqx_A 152 KEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENA 231 (467)
T ss_dssp TTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHH
T ss_pred cccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhh
Confidence 0 00 111 1 7899999999999999988755
Q ss_pred --------CCCcCc---cc----CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH---hcC-----CCCCh
Q 019543 134 --------PVLSRP---LE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN---AEG-----SGLAP 190 (339)
Q Consensus 134 --------g~~~~~---~~----~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~---~~~-----~~~~~ 190 (339)
+..+.. +. ..+|++++|+||+++++ .||+++++++.+++.+..++. ..+ ...+.
T Consensus 232 ~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~---~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (467)
T 2oqx_A 232 YFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVP---MGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEG 308 (467)
T ss_dssp HHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCS---SCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCH
T ss_pred hhcccccccccCccHHHHhhhhhccCCeEEEecccccCCC---CceEEEecChhHHHHHHHHHHhhhccCCcccccchhh
Confidence 222211 11 24788899999999853 468888876413333333222 111 11222
Q ss_pred HHHHHHHhchhhH--HHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC----C--H
Q 019543 191 FDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG----S--L 262 (339)
Q Consensus 191 ~~a~~~~~~l~~~--~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~----~--~ 262 (339)
...+.+..+++.. +.++++..++++++.+.|++. ++..+ |. .+.++++.+. + .
T Consensus 309 ~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~--~~----------------~~~~~~~~~~~~~~~~~~ 369 (467)
T 2oqx_A 309 GAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ--QA----------------GGHAAFVDAGKLLPHIPA 369 (467)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE--EE----------------CSSCEEEEHHHHSTTSCG
T ss_pred hHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee--cC----------------CceEEEEechhhcccCCc
Confidence 1111111222222 234556677888999999876 55433 31 2456677652 1 1
Q ss_pred HH--HHHHHccC-CcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccC-CHHHHHHHHHHHH
Q 019543 263 AL--SKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE-DVNDLISDLDKAL 334 (339)
Q Consensus 263 ~~--~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e-~~~~li~~l~~al 334 (339)
.. ..++++.| ...|+.++.|+.+..-..|.. .... ....+.||||++.. .+++.++.+.++|
T Consensus 370 ~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~--g~~~--------~~~~~~iRl~~~~~~~t~e~i~~~~~~l 435 (467)
T 2oqx_A 370 DQFPAQALACELYKVAGIRAVEIGSFLLGRDPKT--GKQL--------PCPAELLRLTIPRATYTQTHMDFIIEAF 435 (467)
T ss_dssp GGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTT--CSBC--------CCSCCEEEECCCTTTSCHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhcCceecccccccccccccc--cccc--------cCccCeEEEEecCCCCCHHHHHHHHHHH
Confidence 11 44567777 777888875432110000100 0000 01247899999976 5555444444444
No 200
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.61 E-value=2.2e-14 Score=139.78 Aligned_cols=206 Identities=13% Similarity=0.143 Sum_probs=131.4
Q ss_pred CCchHHHHHHHH----HhHhCCC-----------eEEEcCcHHHHHHH-HHHh-------------------cCCCCEEE
Q 019543 53 GNPTRDALESLL----AKLDKAD-----------RALCFTSGMAALAA-VTHL-------------------LGTGEEIV 97 (339)
Q Consensus 53 ~~~~~~~le~~l----a~~~g~~-----------~~l~~~sG~~A~~~-il~l-------------------l~~GD~Vi 97 (339)
.+|...+||+++ ++++|.+ ..+++++|++||.. ++.. +.|+++|+
T Consensus 107 ~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi 186 (475)
T 3k40_A 107 ASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGY 186 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEE
T ss_pred CCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEE
Confidence 678888899865 6667765 47888999999863 3322 12457899
Q ss_pred EcCCCccchHHHHH-----------------------------------------------------HHHHHHHHHcCCE
Q 019543 98 AGDDLYGGTDRLLS-----------------------------------------------------RKIAEMAHAHGAL 124 (339)
Q Consensus 98 ~~~~~y~~~~~~~~-----------------------------------------------------~~I~~la~~~g~~ 124 (339)
++...+..+..... ++|+++|++||++
T Consensus 187 ~s~~~H~s~~~~~~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~ 266 (475)
T 3k40_A 187 CSDQAHSSVERAGLLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLW 266 (475)
T ss_dssp EETTSCHHHHHHHHHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCE
T ss_pred ECCCchHHHHHHHHHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCe
Confidence 98876544322111 9999999999999
Q ss_pred EEEeCCcCCCCCcC----cccC---CCeEEEeccccccccCCCceEEEEEEcChhHH-HHHHHHHHhc------------
Q 019543 125 LLVDNSIMSPVLSR----PLEL---GADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYFLQNAE------------ 184 (339)
Q Consensus 125 livD~a~a~g~~~~----~~~~---~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~-~~l~~~~~~~------------ 184 (339)
+++|++|+.+.... .... .+|.++.|++|+++++.+ +|+++.+++... +.+.....++
T Consensus 267 lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g--~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 344 (475)
T 3k40_A 267 IHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFD--CSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYR 344 (475)
T ss_dssp EEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESSGGGC-----------------------
T ss_pred EEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCc--eEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcc
Confidence 99999998764321 1111 369999999999997643 466666665442 2221110000
Q ss_pred --C--CC--CChHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEE
Q 019543 185 --G--SG--LAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 256 (339)
Q Consensus 185 --~--~~--~~~~~a~~~~~--~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs 256 (339)
+ .+ ...+..+.+++ +.+.++.+.++..++++++++.|++.++++.+.-| ..++++
T Consensus 345 ~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~-----------------~~~iv~ 407 (475)
T 3k40_A 345 HWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEI-----------------NMGLVC 407 (475)
T ss_dssp ----CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCC-----------------BTTEEE
T ss_pred cccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-----------------ceEEEE
Confidence 0 00 01222233332 34556778888899999999999999887643211 357999
Q ss_pred Eee-CCHHHHHHHHccCCccee
Q 019543 257 FLT-GSLALSKHVVETTKYFSI 277 (339)
Q Consensus 257 ~~~-~~~~~~~~~~~~L~~~~i 277 (339)
|.+ +......++.++|...|.
T Consensus 408 f~~~~~~~~~~~l~~~L~~~g~ 429 (475)
T 3k40_A 408 FRLKGSNERNEALLKRINGRGH 429 (475)
T ss_dssp EEESSCHHHHHHHHHHHHHHTS
T ss_pred EEeCCchHHHHHHHHHHHhCCc
Confidence 987 444456778888766543
No 201
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.61 E-value=2.7e-14 Score=137.87 Aligned_cols=167 Identities=19% Similarity=0.195 Sum_probs=112.2
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcHHHHHHHH-HHhcCCCCEEEEcCCCc-cchH-----------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLY-GGTD----------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG~~A~~~i-l~ll~~GD~Vi~~~~~y-~~~~----------------------- 107 (339)
.++...+||++++++++.+++++++||++|+.++ ..+++||| +++++.| +.+.
T Consensus 73 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~ 150 (456)
T 2ez2_A 73 GSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGL 150 (456)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTC
T ss_pred cChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHHHHHHcCCEEEEecccccccccc
Confidence 4677899999999999999999999999999854 45789999 4556655 2100
Q ss_pred ----------H----HHH-----------------------------HHHHHHHHHcCCEEEEeCCcCCC----------
Q 019543 108 ----------R----LLS-----------------------------RKIAEMAHAHGALLLVDNSIMSP---------- 134 (339)
Q Consensus 108 ----------~----~~~-----------------------------~~I~~la~~~g~~livD~a~a~g---------- 134 (339)
. .+. ++|+++|++||++||+|++|+.|
T Consensus 151 ~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~ 230 (456)
T 2ez2_A 151 NIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQ 230 (456)
T ss_dssp CCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHST
T ss_pred cccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEcccccccccccccccc
Confidence 0 110 89999999999999999999763
Q ss_pred -CCcCcc-------cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhc-C----CCCChHH-HHHHHhch
Q 019543 135 -VLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-G----SGLAPFD-CWICLRGV 200 (339)
Q Consensus 135 -~~~~~~-------~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~-~----~~~~~~~-a~~~~~~l 200 (339)
..+... ....|+++.|++|+.+ .+ +||+++++++++++.++..+... + ...+... ++++...+
T Consensus 231 ~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~-~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~ 307 (456)
T 2ez2_A 231 GFENKSIAEIVHEMFSYADGCTMSGKKDCL-VN--IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLR 307 (456)
T ss_dssp TCTTSCHHHHHHHHHTTCSEEEEETTTTTC-CS--SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHH
T ss_pred ccCCcchhhhhhhhcccCCEEEEeCcccCC-CC--ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHH
Confidence 222221 1236888888888755 32 47899886567878777655432 1 1223221 21122223
Q ss_pred hhH-HHHHHHHHHHHHHHHHHHhCC
Q 019543 201 KTM-ALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 201 ~~~-~~r~~~~~~~a~~l~~~L~~~ 224 (339)
+.+ +...+++.++.+++.+.|++.
T Consensus 308 ~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (456)
T 2ez2_A 308 EAMQYEYIEHRVKQVRYLGDKLKAA 332 (456)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 333 455666677788888888764
No 202
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.60 E-value=5.3e-14 Score=133.87 Aligned_cols=170 Identities=14% Similarity=0.152 Sum_probs=112.0
Q ss_pred chHHHHHHHHHhHh-CCC-------eE--EEcCcHHHHHHHH---HH-hcCCCCEEEEcCCCccchHHHHH---------
Q 019543 55 PTRDALESLLAKLD-KAD-------RA--LCFTSGMAALAAV---TH-LLGTGEEIVAGDDLYGGTDRLLS--------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~-g~~-------~~--l~~~sG~~A~~~i---l~-ll~~GD~Vi~~~~~y~~~~~~~~--------- 111 (339)
+...+|++.+++++ |.. +. +.+++|+.|+.++ +. ++++||+|+++++.|.+....++
T Consensus 79 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~ 158 (409)
T 4eu1_A 79 TGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPY 158 (409)
T ss_dssp TCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEE
T ss_pred CCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEE
Confidence 44578999999875 532 33 4578888888643 22 56899999999998876653332
Q ss_pred -----------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC------
Q 019543 112 -----------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR------ 138 (339)
Q Consensus 112 -----------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~------ 138 (339)
++|+++|++||+++|+|++|+......
T Consensus 159 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 238 (409)
T 4eu1_A 159 SYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAF 238 (409)
T ss_dssp CCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTH
T ss_pred EeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchH
Confidence 779999999999999999987554322
Q ss_pred cc----cC-CCeEEEeccccccccCCCceEEEE--EEcChh----HHHHHHHHHHhcCCCCChHHHHHHHhchh------
Q 019543 139 PL----EL-GADIVMHSATKFIAGHSDVMAGVL--AVKGER----LAKELYFLQNAEGSGLAPFDCWICLRGVK------ 201 (339)
Q Consensus 139 ~~----~~-~~Di~~~S~sK~l~g~~~~~gG~v--~~~~~~----l~~~l~~~~~~~~~~~~~~~a~~~~~~l~------ 201 (339)
+. .. .-.++++|+||.++.+|..+ |++ ++.+++ +.+.++...+......++..++++...|+
T Consensus 239 ~~~~~~~~~~~~i~~~S~SK~~g~~G~ri-G~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 317 (409)
T 4eu1_A 239 VPRHLVDMVPNLIVAQSFSKNFGLYGHRC-GALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTA 317 (409)
T ss_dssp HHHHHHTTSSCCEEEEECTTTSSCGGGCC-EEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHhhCCcEEEEecCcccccCccCCc-eEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHH
Confidence 11 11 22488999999999776544 565 455556 55555554433333444554444333332
Q ss_pred ----hHHHHHHHHHHHHHHHHHHHhCCC
Q 019543 202 ----TMALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 202 ----~~~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
.+...+++..++.+++.+.|++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g 345 (409)
T 4eu1_A 318 LWKKELKQMSSRIAEVRKRLVSELKACG 345 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 345566677788888888888753
No 203
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.60 E-value=2.3e-14 Score=135.40 Aligned_cols=171 Identities=12% Similarity=0.051 Sum_probs=109.9
Q ss_pred CchHHHHHHHHHhHh---C-----CCeEEE--cCcHHHHHHHHHH---hcCCCCEEEEcCCCccchHHHHH---------
Q 019543 54 NPTRDALESLLAKLD---K-----ADRALC--FTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDRLLS--------- 111 (339)
Q Consensus 54 ~~~~~~le~~la~~~---g-----~~~~l~--~~sG~~A~~~il~---ll~~GD~Vi~~~~~y~~~~~~~~--------- 111 (339)
.+...+|++.+++++ + .+++++ ++||++|+.+++. .+.|||+|+++.+.|++....+.
T Consensus 68 ~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~ 147 (396)
T 2q7w_A 68 IDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREY 147 (396)
T ss_dssp TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEE
T ss_pred CCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEE
Confidence 344678888888886 2 346666 8888999975442 35799999999998876543222
Q ss_pred -----------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc---C--c
Q 019543 112 -----------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS---R--P 139 (339)
Q Consensus 112 -----------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~---~--~ 139 (339)
++|+++|++||+++|+|++|+..... . +
T Consensus 148 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 227 (396)
T 2q7w_A 148 AYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEG 227 (396)
T ss_dssp ECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHH
T ss_pred ecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHH
Confidence 68999999999999999999754332 1 1
Q ss_pred cc----C-CCeEEEeccccccccCCCceEEEEEE--cChh----HHHHHHHHHHhcCCCCChHHHHHHHhchh-------
Q 019543 140 LE----L-GADIVMHSATKFIAGHSDVMAGVLAV--KGER----LAKELYFLQNAEGSGLAPFDCWICLRGVK------- 201 (339)
Q Consensus 140 ~~----~-~~Di~~~S~sK~l~g~~~~~gG~v~~--~~~~----l~~~l~~~~~~~~~~~~~~~a~~~~~~l~------- 201 (339)
+. . ..++++.|+||.++.+|. ..|++++ ++++ +.+.+....+......++...+++...|+
T Consensus 228 ~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~ 306 (396)
T 2q7w_A 228 LRAFAAMHKELIVASSYSXNFGLYNE-RVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAI 306 (396)
T ss_dssp HHHHHHHCSCEEEEEECTTTTTCGGG-CCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHH
T ss_pred HHHHHhcCCcEEEEEecccccccccc-ccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHH
Confidence 11 1 235889999999986554 4567765 3333 44444433322223335555444444332
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHhCCC
Q 019543 202 ---TMALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 202 ---~~~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
.++...++..++.+++.+.|++++
T Consensus 307 ~~~~~~~~~~~~~~~~~~l~~~L~~~~ 333 (396)
T 2q7w_A 307 WEQELTDMRQRIQRMRQLFVNTLQEKG 333 (396)
T ss_dssp HHHHHHHC-CHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 233445556677788888888763
No 204
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.60 E-value=2.7e-14 Score=139.37 Aligned_cols=209 Identities=14% Similarity=0.172 Sum_probs=135.4
Q ss_pred CcccCCCCchHHHHHHHH----HhHhCCC------------eEEEcCcHHHHHHH-HHHhc-------------------
Q 019543 47 YDYTRSGNPTRDALESLL----AKLDKAD------------RALCFTSGMAALAA-VTHLL------------------- 90 (339)
Q Consensus 47 ~~y~r~~~~~~~~le~~l----a~~~g~~------------~~l~~~sG~~A~~~-il~ll------------------- 90 (339)
+.|. .+|...++|+++ ++++|.+ ..++++||++||.. ++...
T Consensus 108 ~~~~--~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~ 185 (481)
T 4e1o_A 108 FTWA--SSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSL 185 (481)
T ss_dssp SSTT--TCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred CCcC--CCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccc
Confidence 4454 678888888866 4566754 46888999999863 33221
Q ss_pred CCCCEEEEcCCCccchHHHHH------------------------------------------------------HHHHH
Q 019543 91 GTGEEIVAGDDLYGGTDRLLS------------------------------------------------------RKIAE 116 (339)
Q Consensus 91 ~~GD~Vi~~~~~y~~~~~~~~------------------------------------------------------~~I~~ 116 (339)
.++++|+++...+..+..... ++|++
T Consensus 186 ~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~ 265 (481)
T 4e1o_A 186 NARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGP 265 (481)
T ss_dssp HTTEEEEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHH
T ss_pred cCCeEEEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHH
Confidence 267899998876654432211 99999
Q ss_pred HHHHcCCEEEEeCCcCCCCCcC----cccCC---CeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH-Hhc----
Q 019543 117 MAHAHGALLLVDNSIMSPVLSR----PLELG---ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAE---- 184 (339)
Q Consensus 117 la~~~g~~livD~a~a~g~~~~----~~~~~---~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-~~~---- 184 (339)
+|++||+++++|++|+.+.... ....+ +|.++.+++|+++++.+ +|+++.+++.......... .+.
T Consensus 266 la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g--~g~l~~~~~~~l~~~~~~~~~yl~~~~ 343 (481)
T 4e1o_A 266 ICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFD--CTGFWVKDKYKLQQTFSVNPIYLRHAN 343 (481)
T ss_dssp HHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESBHHHHHTTTCCCCGGGCCTT
T ss_pred HHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCc--eEEEEEeCHHHHHHHhcCCchhccCcc
Confidence 9999999999999998764321 11123 59999999999997743 4566666654332111100 010
Q ss_pred --------------CCCCChHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhc
Q 019543 185 --------------GSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA 248 (339)
Q Consensus 185 --------------~~~~~~~~a~~~~~--~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~ 248 (339)
+.....+..+.+++ +.+.+++++++..++++++.+.|++.|+++.+.-|
T Consensus 344 ~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~--------------- 408 (481)
T 4e1o_A 344 SGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKR--------------- 408 (481)
T ss_dssp TTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCC---------------
T ss_pred cCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC---------------
Confidence 00112233333333 34567788888999999999999999887643211
Q ss_pred CCCcceEEEeeC-CHHHHHHHHccCCcce
Q 019543 249 KGAGSVLSFLTG-SLALSKHVVETTKYFS 276 (339)
Q Consensus 249 ~~~~~ivs~~~~-~~~~~~~~~~~L~~~~ 276 (339)
..++++|.+. ......++.++|...|
T Consensus 409 --~~~~v~f~~~~~~~~~~~l~~~L~~~g 435 (481)
T 4e1o_A 409 --HLGLVVFRLKGPNSLTENVLKEIAKAG 435 (481)
T ss_dssp --CSSEEEEEESSCHHHHHHHHHHHHHHC
T ss_pred --ceeEEEEEeCCchHHHHHHHHHHHhCC
Confidence 3578999874 4445667888776655
No 205
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.59 E-value=2e-14 Score=138.82 Aligned_cols=240 Identities=16% Similarity=0.177 Sum_probs=149.4
Q ss_pred CCCchHHHHHHHHHhHhCCC-eEEEcCcHHHHHHHHHH-hc-----C---CCCEEEEcCCCccch---------------
Q 019543 52 SGNPTRDALESLLAKLDKAD-RALCFTSGMAALAAVTH-LL-----G---TGEEIVAGDDLYGGT--------------- 106 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~g~~-~~l~~~sG~~A~~~il~-ll-----~---~GD~Vi~~~~~y~~~--------------- 106 (339)
+.++...+|+++|+++++.. ++++++||++|+..++. +. . ++|+|++.++.|++.
T Consensus 88 ~~~~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 167 (452)
T 3n5m_A 88 QSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRY 167 (452)
T ss_dssp SEEHHHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTT
T ss_pred cCCHHHHHHHHHHHHhCCCCceEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhcc
Confidence 45578899999999998753 47788899999986544 33 4 789999988776531
Q ss_pred ---------------------------------HHHHH---------------------------------HHHHHHHHH
Q 019543 107 ---------------------------------DRLLS---------------------------------RKIAEMAHA 120 (339)
Q Consensus 107 ---------------------------------~~~~~---------------------------------~~I~~la~~ 120 (339)
...++ ++|.++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~ 247 (452)
T 3n5m_A 168 QYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITGGGILMAPQDYMKAVHETCQK 247 (452)
T ss_dssp TTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHH
T ss_pred ccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCeeeCCHHHHHHHHHHHHH
Confidence 11110 889999999
Q ss_pred cCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCC-CceEEEEEEcChhHHHHHHH---HHH---hcCCC
Q 019543 121 HGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHS-DVMAGVLAVKGERLAKELYF---LQN---AEGSG 187 (339)
Q Consensus 121 ~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~-~~~gG~v~~~~~~l~~~l~~---~~~---~~~~~ 187 (339)
||++||+||+|. .|..+.. .....|++ ||||++++ | .. .|++++++ ++++.+.. .+. ..+..
T Consensus 248 ~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~-G~~~-ig~~~~~~-~i~~~~~~~~~~~~~~~~~t~~ 322 (452)
T 3n5m_A 248 HGALLISDEVICGFGRTGKAFGFMNYDVKPDII--TMAKGITS-AYLP-LSATAVKR-EIYEAFKGKGEYEFFRHINTFG 322 (452)
T ss_dssp HTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE--EECGGGGT-TSSC-CEEEEEEH-HHHGGGCSSSTTCSCCCCCSST
T ss_pred cCCEEEEecchhCCCcccccchhhhcCCCCCEE--eecccccC-CCcc-eEEEEECH-HHHHHHhhccCCCCccccCCCC
Confidence 999999999985 3322221 12234655 58899986 4 44 45777764 67666532 111 12345
Q ss_pred CChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHh----CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-
Q 019543 188 LAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLA----SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG- 260 (339)
Q Consensus 188 ~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~----~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~- 260 (339)
.+|+.++.++..|+.+. ...++.+++.+++.+.|+ .++.+..+. +.|.+++|.+.
T Consensus 323 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~------------------~~g~~~~i~~~~ 384 (452)
T 3n5m_A 323 GNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDIR------------------GKGLLVGIELVN 384 (452)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEE------------------ESSSCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE------------------EEEEEEEEEEec
Confidence 67777776666666432 234555556666666554 444433222 24567777652
Q ss_pred C--------HHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHH
Q 019543 261 S--------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDK 332 (339)
Q Consensus 261 ~--------~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~ 332 (339)
+ .+.+.++++.|...|+.+..++.+. + -.++.|||++++..+++.++.+.+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~----~-----------------~~~~~iRi~~~~~~t~e~i~~~l~ 443 (452)
T 3n5m_A 385 DKETKEPIDNDKIASVVNACKEKGLIIGRNGMTT----A-----------------GYNNILTLAPPLVISSEEIAFVIG 443 (452)
T ss_dssp ETTTTEECCHHHHHHHHHHHHHTTEECEECTTSS----T-----------------TCCCEEEECCCTTCCHHHHHHHHH
T ss_pred CCcccCCCCHHHHHHHHHHHHHCCcEEeecCccc----C-----------------CCCCEEEEECCCCCCHHHHHHHHH
Confidence 1 2334567777777788776543211 0 135789999887666665555555
Q ss_pred HHh
Q 019543 333 ALR 335 (339)
Q Consensus 333 al~ 335 (339)
+|+
T Consensus 444 ~l~ 446 (452)
T 3n5m_A 444 TLK 446 (452)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 206
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.59 E-value=5.2e-14 Score=135.28 Aligned_cols=232 Identities=14% Similarity=0.068 Sum_probs=141.1
Q ss_pred HHHHHHHHHhHhC--------CCeEEEcCcHHHHHHHHH-Hh--------cCCCCEEEEcCCCccchHHHHH--------
Q 019543 57 RDALESLLAKLDK--------ADRALCFTSGMAALAAVT-HL--------LGTGEEIVAGDDLYGGTDRLLS-------- 111 (339)
Q Consensus 57 ~~~le~~la~~~g--------~~~~l~~~sG~~A~~~il-~l--------l~~GD~Vi~~~~~y~~~~~~~~-------- 111 (339)
..+|++.++++++ .+++++++++++|+.+++ .+ ++|||+|+++.|.|.+....++
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~ 181 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV 181 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeee
Confidence 6789999998875 346777777799998654 57 8999999999999988765554
Q ss_pred -----HHHH------------------------HHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEeccccccccCCCc
Q 019543 112 -----RKIA------------------------EMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHSDV 161 (339)
Q Consensus 112 -----~~I~------------------------~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK~l~g~~~~ 161 (339)
++|. ++++ ++..+.|+++-.... ...+..+.+|+++||||.++.+| .
T Consensus 182 ~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~l~--~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G-~ 258 (427)
T 2hox_A 182 WAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRHAVIK--GCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFTGHSG-S 258 (427)
T ss_dssp EEEEGGGGTTCSCGGGEEEEEESSCTTTCCCCCCSST--TCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHTSCGG-G
T ss_pred ecCCHHHHHHhhcCCceEEEEcCCCCCcccccHHHHc--CCCEEEeecccCCCCCccccCCCceEEEEeChhcCCCCC-c
Confidence 1111 1221 345566666532110 01112356899999999998766 4
Q ss_pred eEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh---------------HHHHHHHHHHHHHHHHHHHhCCCC
Q 019543 162 MAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---------------MALRVEKQQDNAQKIAEFLASHPR 226 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~---------------~~~r~~~~~~~a~~l~~~L~~~~~ 226 (339)
+.|+++++++++++.++.++.......+.....++...|+. +...+++.+++.+++.+.|+++++
T Consensus 259 RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 338 (427)
T 2hox_A 259 RFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDR 338 (427)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSS
T ss_pred eEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 56788886567888888877655555666554444333332 233456667788889999998877
Q ss_pred ceEEec--CCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccC-CcceeecccCCcccceeccccccCCCCCHHH
Q 019543 227 VKKVNY--AGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEV 303 (339)
Q Consensus 227 i~~v~~--p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L-~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~ 303 (339)
+....+ |. +...+.......+..+++.+... ..++++.| +..||.++.|..+.
T Consensus 339 ~~~~~~~~~~-----~~~~~~~~~p~~g~f~~~~~~~~--~~~~~~~ll~~~gI~v~pg~~f~----------------- 394 (427)
T 2hox_A 339 FSYQELPQSE-----YCNYFRRMRPPSPSYAWVKCEWE--EDKDCYQTFQNGRINTQNGVGFE----------------- 394 (427)
T ss_dssp EECCCCCSCE-----EETTTTEEECCCCSEEEEEECSG--GGCSHHHHHHHTTEECEEGGGGT-----------------
T ss_pred cccccccccc-----ccccccccCCCCceEEEEECCCc--HHHHHHHHHHHCCEEEcCCCccC-----------------
Confidence 642101 10 00000000011345677777541 23445544 35688877664321
Q ss_pred HHhCCCCCCeEEEEecc
Q 019543 304 RQARGLTEDLVRISVGI 320 (339)
Q Consensus 304 ~~~~g~~~~~lRisvg~ 320 (339)
..++.+|||++.
T Consensus 395 -----~~~~~~Ris~~~ 406 (427)
T 2hox_A 395 -----ASSRYVRLSLIK 406 (427)
T ss_dssp -----SCTTEEEEECSS
T ss_pred -----CCCCEEEEEecC
Confidence 124789999996
No 207
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.59 E-value=7.8e-14 Score=134.74 Aligned_cols=169 Identities=13% Similarity=0.076 Sum_probs=109.8
Q ss_pred chHHHHHHHHHhHh-CCC-------eEEE--cCcHHHHHHH---HHHhcCCCCEEEEcCCCccchHHHH-----------
Q 019543 55 PTRDALESLLAKLD-KAD-------RALC--FTSGMAALAA---VTHLLGTGEEIVAGDDLYGGTDRLL----------- 110 (339)
Q Consensus 55 ~~~~~le~~la~~~-g~~-------~~l~--~~sG~~A~~~---il~ll~~GD~Vi~~~~~y~~~~~~~----------- 110 (339)
....++++.+++++ |.+ ++++ +++|+.|+.. +++++.|||+|+++++.|......+
T Consensus 94 ~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v 173 (448)
T 3meb_A 94 AGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPY 173 (448)
T ss_dssp TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCC
T ss_pred cchHHHHHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeE
Confidence 34678888888876 643 5777 8888999864 3457889999999988776432110
Q ss_pred -----------------------H---------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC--
Q 019543 111 -----------------------S---------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR-- 138 (339)
Q Consensus 111 -----------------------~---------------------------~~I~~la~~~g~~livD~a~a~g~~~~-- 138 (339)
+ ++|+++|++||+++|+|++|.......
T Consensus 174 ~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~ 253 (448)
T 3meb_A 174 KEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFE 253 (448)
T ss_dssp EEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHH
T ss_pred EEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcc
Confidence 0 779999999999999999987543322
Q ss_pred ----cc----cCC-CeEEEeccccccccCCCceEEEE--EE--------cCh----hHHHHHHHHHHhcCCCCChHHHHH
Q 019543 139 ----PL----ELG-ADIVMHSATKFIAGHSDVMAGVL--AV--------KGE----RLAKELYFLQNAEGSGLAPFDCWI 195 (339)
Q Consensus 139 ----~~----~~~-~Di~~~S~sK~l~g~~~~~gG~v--~~--------~~~----~l~~~l~~~~~~~~~~~~~~~a~~ 195 (339)
.+ ..+ -.+++.|+||.++.+|..+| ++ ++ +++ .+.+.+....+......+...+++
T Consensus 254 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG-~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a 332 (448)
T 3meb_A 254 ADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIG-CLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYI 332 (448)
T ss_dssp HHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCE-EEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred cCchhHHHHhhcCCcEEEEecccccCCCccccce-eeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHH
Confidence 01 112 24789999999997775554 54 45 434 344444444433333444444433
Q ss_pred HHhch----------hhHHHHHHHHHHHHHHHHHHHhCC
Q 019543 196 CLRGV----------KTMALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 196 ~~~~l----------~~~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
+...| +.++...++..++.+++.+.|+++
T Consensus 333 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 333 VQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp HHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33332 224555666677788888888765
No 208
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.58 E-value=1.3e-14 Score=137.12 Aligned_cols=169 Identities=13% Similarity=0.056 Sum_probs=107.9
Q ss_pred chHHHHHHHHHhHh-CC----CeEEE--cCcHHHHHHHHHH-h--cCCCCEEEEcCCCccchHHHHH-------------
Q 019543 55 PTRDALESLLAKLD-KA----DRALC--FTSGMAALAAVTH-L--LGTGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~-g~----~~~l~--~~sG~~A~~~il~-l--l~~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
....+|++.+++++ +. +++++ ++||++|+.+++. + +.|||+|+++.+.|++....+.
T Consensus 69 ~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 148 (394)
T 2ay1_A 69 SGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFD 148 (394)
T ss_dssp SCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEE
T ss_pred CCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEeccc
Confidence 34678999999886 43 46776 8888999986543 3 3599999999998876543222
Q ss_pred -------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc---C--cc---
Q 019543 112 -------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS---R--PL--- 140 (339)
Q Consensus 112 -------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~---~--~~--- 140 (339)
++|+++|++||+++|+|++|+..... . ++
T Consensus 149 ~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 228 (394)
T 2ay1_A 149 AETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLI 228 (394)
T ss_dssp TTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHH
T ss_pred ccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHH
Confidence 68999999999999999999765432 1 11
Q ss_pred -cCC-CeEEEeccccccccCCCceEEEEEE--cChhHHHHHH----HHHHhcCCCCChHHHHHHHhchh----------h
Q 019543 141 -ELG-ADIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELY----FLQNAEGSGLAPFDCWICLRGVK----------T 202 (339)
Q Consensus 141 -~~~-~Di~~~S~sK~l~g~~~~~gG~v~~--~~~~l~~~l~----~~~~~~~~~~~~~~a~~~~~~l~----------~ 202 (339)
..+ ..++++|+||+++.+|. ..|++++ +++++.+.+. ..........++..++++...|+ .
T Consensus 229 ~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~ 307 (394)
T 2ay1_A 229 ASRIPEVLIAASCSKNFGIYRE-RTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAE 307 (394)
T ss_dssp HHHCSSEEEEEECTTTTTCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHH
T ss_pred hhcCCCEEEEEeccCCCcCcCC-ccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHH
Confidence 112 24789999999986553 4567776 3344444332 22222222335554444433332 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC
Q 019543 203 MALRVEKQQDNAQKIAEFLASH 224 (339)
Q Consensus 203 ~~~r~~~~~~~a~~l~~~L~~~ 224 (339)
++...++..++.+++.+.|+++
T Consensus 308 ~~~~~~~~~~~~~~l~~~L~~~ 329 (394)
T 2ay1_A 308 LEAVRSGMLRLREQLAGELRDL 329 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 3444555666777777777764
No 209
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.57 E-value=2.5e-14 Score=137.24 Aligned_cols=206 Identities=15% Similarity=0.131 Sum_probs=130.2
Q ss_pred CCchHHHHHHHHHhHh-CCCeEEEcCcHHHHHHHHHH-hc--CCCCEEEEcCCCccchH---------------------
Q 019543 53 GNPTRDALESLLAKLD-KADRALCFTSGMAALAAVTH-LL--GTGEEIVAGDDLYGGTD--------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~-g~~~~l~~~sG~~A~~~il~-ll--~~GD~Vi~~~~~y~~~~--------------------- 107 (339)
.++...+|++++++++ +.+.+++++||++|+..++. +. .++|+|++.++.|++..
T Consensus 93 ~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 172 (434)
T 3l44_A 93 PTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAG 172 (434)
T ss_dssp CCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTT
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCC
Confidence 4677889999999998 56789999999999985443 32 37899999887765411
Q ss_pred ---------------------HHHH----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC
Q 019543 108 ---------------------RLLS----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR 138 (339)
Q Consensus 108 ---------------------~~~~----------------------------~~I~~la~~~g~~livD~a~a~g~~~~ 138 (339)
..+. ++|.++|++||++||+||+|.....+.
T Consensus 173 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~ 252 (434)
T 3l44_A 173 VPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMY 252 (434)
T ss_dssp CCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSS
T ss_pred CCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccc
Confidence 0111 899999999999999999996221111
Q ss_pred c-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH---hcCCCCChHHHHHHHhchhhH--HHHHH
Q 019543 139 P-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN---AEGSGLAPFDCWICLRGVKTM--ALRVE 208 (339)
Q Consensus 139 ~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~---~~~~~~~~~~a~~~~~~l~~~--~~r~~ 208 (339)
. .....|+ .|+||.+++ | ...|+++++ +++++.+..... ..+...+++.++.+...++.+ +...+
T Consensus 253 ~~~~~~~~~~~di--~t~sK~~~~-G-~~iG~~~~~-~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~ 327 (434)
T 3l44_A 253 GGAQDLLGVTPDL--TALGKVIGG-G-LPIGAYGGK-KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYE 327 (434)
T ss_dssp SCHHHHHTCCCSE--EEEEGGGGT-T-SSCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHH
T ss_pred cHHHHHcCCCCCe--eehhhhhcC-C-cCeeeEEEc-HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHH
Confidence 1 1223464 468899984 4 345667666 466665543211 123556777766666655543 33455
Q ss_pred HHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-------------CHHHHHHHHcc
Q 019543 209 KQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------------SLALSKHVVET 271 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-------------~~~~~~~~~~~ 271 (339)
+.+++.+++.+.|++. +.+..+ ++.+.++++.+. +.....++.+.
T Consensus 328 ~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (434)
T 3l44_A 328 KLDELGATLEKGILEQAAKHNIDITL------------------NRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKL 389 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEE------------------EEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEE------------------EeeccEEEEEEecCcccchhhccccCHHHHHHHHHH
Confidence 5666666777766542 322111 225678888762 23334667777
Q ss_pred CCcceeeccc
Q 019543 272 TKYFSITVSF 281 (339)
Q Consensus 272 L~~~~i~v~~ 281 (339)
|.+.|+.++.
T Consensus 390 l~~~Gv~v~~ 399 (434)
T 3l44_A 390 MLQEGVNLAP 399 (434)
T ss_dssp HHHTTEECCS
T ss_pred HHHCCeEEee
Confidence 7777776653
No 210
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.57 E-value=9e-14 Score=133.83 Aligned_cols=236 Identities=17% Similarity=0.172 Sum_probs=147.8
Q ss_pred chHHHHHHHHHhHhCCCeE--EEcCcHHHHHHH-HHH-hcCCCCEEEEcCCCccchHHHHH-------------------
Q 019543 55 PTRDALESLLAKLDKADRA--LCFTSGMAALAA-VTH-LLGTGEEIVAGDDLYGGTDRLLS------------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~--l~~~sG~~A~~~-il~-ll~~GD~Vi~~~~~y~~~~~~~~------------------- 111 (339)
+..+++++.+++++|.+.. +++++|++|+.+ .+. .+++||+|+++++.|+.+...+.
T Consensus 108 ~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~ 187 (438)
T 1wyu_A 108 QATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGR 187 (438)
T ss_dssp HHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTB
T ss_pred HHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCcCCc
Confidence 4578999999999998754 566666755443 222 46899999999998876643221
Q ss_pred ---------------------------HHHHHHHHHcCCEEEEeCC-cCCCCCcCcccCCCeEEEecccc-----ccccC
Q 019543 112 ---------------------------RKIAEMAHAHGALLLVDNS-IMSPVLSRPLELGADIVMHSATK-----FIAGH 158 (339)
Q Consensus 112 ---------------------------~~I~~la~~~g~~livD~a-~a~g~~~~~~~~~~Di~~~S~sK-----~l~g~ 158 (339)
++|.++|++||+++++|.. ++.|....+..+++|++++|..| +++|+
T Consensus 188 ~d~~~i~~~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~~~~~Gp 267 (438)
T 1wyu_A 188 TPLPEVGEEVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPMGFGGP 267 (438)
T ss_dssp CCCCCCCTTEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCCCGGGCS
T ss_pred cCHHHhCCCeEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCCccCCCC
Confidence 9999999999999998844 55554433334578999999333 34443
Q ss_pred CCceEEEEEEcChhHHHHHHH-------------------------HHHhcCC-CC---ChHHHHH-H--Hhchh--hHH
Q 019543 159 SDVMAGVLAVKGERLAKELYF-------------------------LQNAEGS-GL---APFDCWI-C--LRGVK--TMA 204 (339)
Q Consensus 159 ~~~~gG~v~~~~~~l~~~l~~-------------------------~~~~~~~-~~---~~~~a~~-~--~~~l~--~~~ 204 (339)
.+|++++++ ++.+.+.. .++..++ .+ ....+.. + +..+. .++
T Consensus 268 ---~~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~ 343 (438)
T 1wyu_A 268 ---HFGFLATKK-AFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLR 343 (438)
T ss_dssp ---CCEEEEECG-GGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CeeEEEEcH-HHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHH
Confidence 357888875 45544310 0111121 11 2222211 1 22222 245
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeec--ccC
Q 019543 205 LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITV--SFG 282 (339)
Q Consensus 205 ~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v--~~G 282 (339)
+..++..++++++.+.|++.++++.+ .|. + .-.++.|.++ ....++.+.|...|+.+ +.|
T Consensus 344 ~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~----~-----------~~~~~~~~~~--~~~~~~~~~L~~~gi~v~~~~~ 405 (438)
T 1wyu_A 344 EVALKSVEMAHKLHALLLEVPGVRPF-TPK----P-----------FFNEFALALP--KDPEAVRRALAERGFHGATPVP 405 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTCEEC-SCS----S-----------BCSEEEEECS--SCHHHHHHHHHHTTCCCCEECC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEC-CCC----C-----------eEEEEEEeCC--CCHHHHHHHHHHCCceeccccc
Confidence 56667778899999999998876532 221 1 2234555543 13456777776667765 222
Q ss_pred CcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 283 SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 283 ~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.. .+++.||||++..++++.++.+.++|++
T Consensus 406 ~~------------------------~~~~~lRis~~~~~t~edi~~~~~~l~~ 435 (438)
T 1wyu_A 406 RE------------------------YGENLALFAATELHEEEDLLALREALKE 435 (438)
T ss_dssp TT------------------------SCSSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred cc------------------------cCCCeEEEEecccCCHHHHHHHHHHHHH
Confidence 11 0247899999988888888888888865
No 211
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.56 E-value=1e-13 Score=135.16 Aligned_cols=147 Identities=16% Similarity=0.212 Sum_probs=93.5
Q ss_pred HHHHHHHHHcCCEEEEeCCcCCCCCcCc-c-----c-CCCeEEEeccccccccCCCceEEEEEEcChhH-HHHHHHHHHh
Q 019543 112 RKIAEMAHAHGALLLVDNSIMSPVLSRP-L-----E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYFLQNA 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a~g~~~~~-~-----~-~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l-~~~l~~~~~~ 183 (339)
++|+++|++||+++++|++|+.+....+ . . .++|++++|+||+++++ ..+|+++++++.. .+.+.....+
T Consensus 255 ~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p--~~~G~l~~~~~~~l~~~~~~~~~y 332 (486)
T 1js3_A 255 LEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN--FDCSAMWVKRRTDLTGAFKLDPVY 332 (486)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC--SSCEEEEESCHHHHHGGGC-----
T ss_pred HHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCC--cceEEEEEeCHHHHHHHhcCCchh
Confidence 9999999999999999999987643211 1 1 26799999999999865 3467888876543 2322110100
Q ss_pred c--------------------CCCCChHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHhCCCCceEEecCCCCCCCch
Q 019543 184 E--------------------GSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 241 (339)
Q Consensus 184 ~--------------------~~~~~~~~a~~~~~--~l~~~~~r~~~~~~~a~~l~~~L~~~~~i~~v~~p~~~~~~~~ 241 (339)
. +.....+..+.++. +.+.+.++.++..++++++.+.|++.|+++.+..|
T Consensus 333 l~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-------- 404 (486)
T 1js3_A 333 LKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEV-------- 404 (486)
T ss_dssp -------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCC--------
T ss_pred hCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC--------
Confidence 0 00112233333333 34556777888889999999999998887643222
Q ss_pred HhHhhhcCCCcceEEEeeCC-HHHHHHHHccCCccee
Q 019543 242 ELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSI 277 (339)
Q Consensus 242 ~~~~~~~~~~~~ivs~~~~~-~~~~~~~~~~L~~~~i 277 (339)
..+++.|.+.+ .....++.+.|...|+
T Consensus 405 ---------~~~~v~f~~~~~~~~~~~l~~~L~~~g~ 432 (486)
T 1js3_A 405 ---------TLGLVCFRLKGSDGLNEALLERINSARK 432 (486)
T ss_dssp ---------CSSEEEEEESSCHHHHHHHHHHHHHHTS
T ss_pred ---------ceeEEEEEecChHHHHHHHHHHHHhcCC
Confidence 35688888753 2234667777765554
No 212
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.56 E-value=1.2e-13 Score=133.50 Aligned_cols=231 Identities=15% Similarity=0.114 Sum_probs=147.5
Q ss_pred CCCCchHHHHHHHHHhHhC---CCeEEEcCcHHHHHHHHHH-h---cC----------C-CCEEEEcCCCccc-------
Q 019543 51 RSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAAVTH-L---LG----------T-GEEIVAGDDLYGG------- 105 (339)
Q Consensus 51 r~~~~~~~~le~~la~~~g---~~~~l~~~sG~~A~~~il~-l---l~----------~-GD~Vi~~~~~y~~------- 105 (339)
++.++...+++++|+++++ .+++++++||++|+..++. + .+ | ||+||+.++.|++
T Consensus 97 ~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~ 176 (449)
T 2cjg_A 97 DVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLS 176 (449)
T ss_dssp TCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGG
T ss_pred ccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhh
Confidence 4456778999999999984 4688899999999975432 1 22 2 8999998876542
Q ss_pred --------------------------------------------hHHHH----H------------------------HH
Q 019543 106 --------------------------------------------TDRLL----S------------------------RK 113 (339)
Q Consensus 106 --------------------------------------------~~~~~----~------------------------~~ 113 (339)
....+ . ++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~ 256 (449)
T 2cjg_A 177 LTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAA 256 (449)
T ss_dssp TCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHH
T ss_pred hcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHH
Confidence 11122 1 89
Q ss_pred HHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHH-----HHH
Q 019543 114 IAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-----LQN 182 (339)
Q Consensus 114 I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~-----~~~ 182 (339)
|.++|++||++||+||+|+ .|..+.. .....|++ |+||++ + + |++++++ ++.+.+.. ...
T Consensus 257 l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l--~---i-G~~~~~~-~~~~~l~~~~~~~~~~ 327 (449)
T 2cjg_A 257 MRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV--AFGKKT--Q---V-CGVMAGR-RVDEVADNVFAVPSRL 327 (449)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGG--S---S-EEEEECG-GGGGSTTCTTTSTTSS
T ss_pred HHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEE--EecCcc--c---E-EEEEECH-HHhhhhhhcccCCccc
Confidence 9999999999999999997 3332221 12345765 678999 2 3 5666665 56654221 111
Q ss_pred hcCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCC----CC-ceEEecCCCCCCCchHhHhhhcCCCcceE
Q 019543 183 AEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH----PR-VKKVNYAGLPEHPGHELHYSQAKGAGSVL 255 (339)
Q Consensus 183 ~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~----~~-i~~v~~p~~~~~~~~~~~~~~~~~~~~iv 255 (339)
..+...++..++.+...|+.+. ...++.+++.+++.+.|+++ +. +..+ ++.|.++
T Consensus 328 ~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~------------------~~~g~~~ 389 (449)
T 2cjg_A 328 NSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDP------------------RGRGLMC 389 (449)
T ss_dssp CCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE------------------EEETTEE
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE------------------eeccEEE
Confidence 1234556776666666665432 34556667777888877653 33 3211 2256788
Q ss_pred EEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Q 019543 256 SFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 335 (339)
Q Consensus 256 s~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~ 335 (339)
+|.+.+.....+|++.|.+.|+.++.+ .++.||+++.+..+++.++.+.++|+
T Consensus 390 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~---------------------------g~~~iRi~~~~~~t~e~i~~~l~~l~ 442 (449)
T 2cjg_A 390 AFSLPTTADRDELIRQLWQRAVIVLPA---------------------------GADTVRFRPPLTVSTAEIDAAIAAVR 442 (449)
T ss_dssp EEECSSHHHHHHHHHHHHHTTEECEEE---------------------------TTTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEECChHHHHHHHHHHHHCCeEEecC---------------------------CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 888876545667888776667765422 13679999887666665555555554
No 213
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.55 E-value=5.6e-14 Score=143.99 Aligned_cols=171 Identities=13% Similarity=0.092 Sum_probs=115.4
Q ss_pred CCchHHHHHHHHHhHhCCCeEEEcCcH-HHHHHH-HHHhcCCCCEEEEcCCCccch------------------------
Q 019543 53 GNPTRDALESLLAKLDKADRALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGT------------------------ 106 (339)
Q Consensus 53 ~~~~~~~le~~la~~~g~~~~l~~~sG-~~A~~~-il~ll~~GD~Vi~~~~~y~~~------------------------ 106 (339)
....+.++|+.+++++|.++++++++| ++|+.+ +.++++|||+|+++++.|...
T Consensus 203 ~~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~~ 282 (755)
T 2vyc_A 203 HTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGII 282 (755)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSCB
T ss_pred CccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCccccc
Confidence 345688999999999999988888888 477875 556899999999987654211
Q ss_pred ---------H----HHH--------------H----------------HHHHHHHHHcCCEEEEeCCcCCCCCc------
Q 019543 107 ---------D----RLL--------------S----------------RKIAEMAHAHGALLLVDNSIMSPVLS------ 137 (339)
Q Consensus 107 ---------~----~~~--------------~----------------~~I~~la~~~g~~livD~a~a~g~~~------ 137 (339)
. ..+ + ++|+++|++||+++++|++|+.+...
T Consensus 283 g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~ 362 (755)
T 2vyc_A 283 GPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYAD 362 (755)
T ss_dssp CCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTT
T ss_pred cccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCcccCC
Confidence 1 111 0 99999999999999999999764321
Q ss_pred -CcccCC--CeE------EEeccccccccCCCceEEEEEEcCh--hH-HHHHHHHHHhc-CCCCChHHHHH---HHhchh
Q 019543 138 -RPLELG--ADI------VMHSATKFIAGHSDVMAGVLAVKGE--RL-AKELYFLQNAE-GSGLAPFDCWI---CLRGVK 201 (339)
Q Consensus 138 -~~~~~~--~Di------~~~S~sK~l~g~~~~~gG~v~~~~~--~l-~~~l~~~~~~~-~~~~~~~~a~~---~~~~l~ 201 (339)
.++ .+ +|+ +++|+||+++|+. .||+++++++ .+ ...+......+ ++..+....+. +...++
T Consensus 363 ~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~~--~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~ 439 (755)
T 2vyc_A 363 HYAM-RGEPGDHNGPTVFATHSTHKLLNALS--QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMD 439 (755)
T ss_dssp SSSS-CSCCCCCSSBEEEEEEETTTSSSCCT--TCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHS
T ss_pred cchh-cCCcCCccCCCeEEEECccccccCcC--CeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 122 45 676 9999999998753 4778877653 12 23333332233 34444432222 222222
Q ss_pred h--HHHHHHHHHHHHHHHHHHHhCCCC
Q 019543 202 T--MALRVEKQQDNAQKIAEFLASHPR 226 (339)
Q Consensus 202 ~--~~~r~~~~~~~a~~l~~~L~~~~~ 226 (339)
. ...++++..++++++++.|+++++
T Consensus 440 ~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 440 GNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2 356788888889999999887655
No 214
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.55 E-value=6.1e-14 Score=134.67 Aligned_cols=207 Identities=15% Similarity=0.169 Sum_probs=136.1
Q ss_pred CCCchHHHHHHHHHhHh-CCCeEEEcCcHHHHHHHHHHh---cCCCCEEEEcCCCccchH--------------------
Q 019543 52 SGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTD-------------------- 107 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~-g~~~~l~~~sG~~A~~~il~l---l~~GD~Vi~~~~~y~~~~-------------------- 107 (339)
+.++..++++++|++++ +.+.+++++||++|+.+++.+ +.++|+|++.++.|++..
T Consensus 93 ~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~ 172 (434)
T 2epj_A 93 APGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSA 172 (434)
T ss_dssp SCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESST
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCC
Confidence 35677899999999999 788899999999999764432 456677887777665310
Q ss_pred ----------------------HHHH----------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-
Q 019543 108 ----------------------RLLS----------------------------RKIAEMAHAHGALLLVDNSIMSPVL- 136 (339)
Q Consensus 108 ----------------------~~~~----------------------------~~I~~la~~~g~~livD~a~a~g~~- 136 (339)
..++ ++|.++|++||++||+||+|+ |..
T Consensus 173 g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~ 251 (434)
T 2epj_A 173 GVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GFRL 251 (434)
T ss_dssp TCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TTTS
T ss_pred CCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ceeC
Confidence 0110 899999999999999999997 331
Q ss_pred cCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH--h-cCCCCChHHHHHHHhchhhHH--HH
Q 019543 137 SRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--A-EGSGLAPFDCWICLRGVKTMA--LR 206 (339)
Q Consensus 137 ~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~-~~~~~~~~~a~~~~~~l~~~~--~r 206 (339)
+.. .....|++ |+||++++ | ..+|++++++ ++++.+..... . .+...+|..++.+...|+.+. ..
T Consensus 252 g~~~~~~~~~~~~di~--s~sK~l~~-G-~~~G~v~~~~-~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~ 326 (434)
T 2epj_A 252 GLEGAQGYFNIEGDII--VLGKIIGG-G-FPVGAVAGSR-EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPV 326 (434)
T ss_dssp STTHHHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECH-HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCH
T ss_pred CcchhhHHhCCCCCee--eecchhcC-C-cceeeeeecH-HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCH
Confidence 111 12235764 78999996 4 4577888874 66665543111 1 123567777766666666543 34
Q ss_pred HHHHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-------------HHHHHHHH
Q 019543 207 VEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-------------LALSKHVV 269 (339)
Q Consensus 207 ~~~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-------------~~~~~~~~ 269 (339)
.++.+++.+++.+.|++. +.+..+ ++.|.+++|.+.+ .....+|.
T Consensus 327 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (434)
T 2epj_A 327 YSVSREAAKALEEAASEVLDRTGLPYTI------------------NRVESMMQLFIGVEEVSNAAQARKADKKFYVKLH 388 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEE------------------EEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcEEE------------------EEeeeEEEEEEeCCCcccchhccccCHHHHHHHH
Confidence 566667777777777653 211111 1256788998754 23456788
Q ss_pred ccCCcceeecccC
Q 019543 270 ETTKYFSITVSFG 282 (339)
Q Consensus 270 ~~L~~~~i~v~~G 282 (339)
+.|.+.|+.++.|
T Consensus 389 ~~l~~~Gv~v~~~ 401 (434)
T 2epj_A 389 EEMLRRGVFIAPS 401 (434)
T ss_dssp HHHHHTTEECCSS
T ss_pred HHHHHCCeEEecc
Confidence 8887778876644
No 215
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.55 E-value=2.1e-14 Score=137.73 Aligned_cols=206 Identities=14% Similarity=0.121 Sum_probs=130.1
Q ss_pred CCchHHHHHHHHHhHh-CCCeEEEcCcHHHHHHHHHH-hc--CCCCEEEEcCCCccchH---------------------
Q 019543 53 GNPTRDALESLLAKLD-KADRALCFTSGMAALAAVTH-LL--GTGEEIVAGDDLYGGTD--------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~-g~~~~l~~~sG~~A~~~il~-ll--~~GD~Vi~~~~~y~~~~--------------------- 107 (339)
.++...+|++++++++ +.+.+++++||++|+..++. +. .++++|++.++.|++..
T Consensus 91 ~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 170 (429)
T 3k28_A 91 PTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPG 170 (429)
T ss_dssp CCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTT
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCC
Confidence 4678889999999998 56789999999999985443 32 36788888776654210
Q ss_pred ---------------------HHHH----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC
Q 019543 108 ---------------------RLLS----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR 138 (339)
Q Consensus 108 ---------------------~~~~----------------------------~~I~~la~~~g~~livD~a~a~g~~~~ 138 (339)
..+. ++|.++|++||++||+||+|.....+.
T Consensus 171 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~ 250 (429)
T 3k28_A 171 VPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVAY 250 (429)
T ss_dssp CCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSST
T ss_pred CCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccCc
Confidence 1111 889999999999999999995211111
Q ss_pred c-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH---hcCCCCChHHHHHHHhchhhH-HHHHHH
Q 019543 139 P-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN---AEGSGLAPFDCWICLRGVKTM-ALRVEK 209 (339)
Q Consensus 139 ~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~---~~~~~~~~~~a~~~~~~l~~~-~~r~~~ 209 (339)
. .....|++ |+||++++ | ...|++++++ ++++.+..... ..+...+++.++.++..++.+ +...++
T Consensus 251 ~~~~~~~~~~~di~--t~sK~~~~-G-~~iG~~~~~~-~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~ 325 (429)
T 3k28_A 251 NCGQGYYGVTPDLT--CLGKVIGG-G-LPVGAYGGKA-EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLTPESYVE 325 (429)
T ss_dssp THHHHHHTCCCSEE--EECGGGGT-T-SCCEEEEECH-HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCCHHHHHH
T ss_pred chHHHHhCCCCcee--hhhhhhcC-C-CCeEEEEEcH-HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 1 12234554 68899985 4 4567887764 66665543221 123456777666665555432 455666
Q ss_pred HHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-------------CHHHHHHHHccC
Q 019543 210 QQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------------SLALSKHVVETT 272 (339)
Q Consensus 210 ~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-------------~~~~~~~~~~~L 272 (339)
.+++.+++.+.|++. +.+..+ ++.+.++++.+. +...+.++.+.|
T Consensus 326 ~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 387 (429)
T 3k28_A 326 FERKAEMLEAGLRKAAEKHGIPHHI------------------NRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREM 387 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEE------------------EEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCEEE------------------EeeccEEEEEEecCCcccccccccccHHHHHHHHHHH
Confidence 667777777777653 322111 224667777652 233356777777
Q ss_pred Ccceeeccc
Q 019543 273 KYFSITVSF 281 (339)
Q Consensus 273 ~~~~i~v~~ 281 (339)
...|+.++.
T Consensus 388 ~~~Gv~v~~ 396 (429)
T 3k28_A 388 VEQGVFLPP 396 (429)
T ss_dssp HHTTEECCS
T ss_pred HHCCeEEec
Confidence 777776654
No 216
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.55 E-value=1.6e-13 Score=134.45 Aligned_cols=175 Identities=11% Similarity=0.109 Sum_probs=113.0
Q ss_pred CCchHHHHHHH----HHhHhCCC----eEEEcCcHHHHHHHHH-Hhc--------CCC-----C-EEEEcCCCccchHHH
Q 019543 53 GNPTRDALESL----LAKLDKAD----RALCFTSGMAALAAVT-HLL--------GTG-----E-EIVAGDDLYGGTDRL 109 (339)
Q Consensus 53 ~~~~~~~le~~----la~~~g~~----~~l~~~sG~~A~~~il-~ll--------~~G-----D-~Vi~~~~~y~~~~~~ 109 (339)
.+|...++|+. +++++|.+ .++++++|++|+..++ .+. ++| | +|++++..|......
T Consensus 126 ~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~ 205 (504)
T 2okj_A 126 IAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKA 205 (504)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHH
T ss_pred hChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHH
Confidence 44666666655 48888864 5778888899987533 332 257 7 788887655433211
Q ss_pred HH---------------------------------------------------------HHHHHHHHHcCCEEEEeCCcC
Q 019543 110 LS---------------------------------------------------------RKIAEMAHAHGALLLVDNSIM 132 (339)
Q Consensus 110 ~~---------------------------------------------------------~~I~~la~~~g~~livD~a~a 132 (339)
+. ++|+++|++||+++++|++|+
T Consensus 206 ~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~ 285 (504)
T 2okj_A 206 GAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWG 285 (504)
T ss_dssp HHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTG
T ss_pred HHHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhh
Confidence 10 999999999999999999998
Q ss_pred CCCCc-----Cccc--CCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHH-HHhc-CCC----------------
Q 019543 133 SPVLS-----RPLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-QNAE-GSG---------------- 187 (339)
Q Consensus 133 ~g~~~-----~~~~--~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~-~~~~-~~~---------------- 187 (339)
.+... ..+. .++|+++.|++|+++++. .+|+++++++++....... ..+. +..
T Consensus 286 ~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~--~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 363 (504)
T 2okj_A 286 GGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLL--QCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQC 363 (504)
T ss_dssp GGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCS--CCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCS
T ss_pred hHHHhCHhhHhhcCCcccCCEEEECchhhcCCCc--ceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCC
Confidence 76542 1122 268999999999999663 3578888764454432111 1111 110
Q ss_pred ---CChHHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 188 ---LAPFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 188 ---~~~~~a~~~~~~l--~~~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
......+.++..+ +.+.++.++..++++++.+.|++.++++.
T Consensus 364 ~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 410 (504)
T 2okj_A 364 GRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEM 410 (504)
T ss_dssp SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred CCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 1233333333333 44566777888999999999999888754
No 217
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.55 E-value=8e-13 Score=126.19 Aligned_cols=163 Identities=15% Similarity=0.084 Sum_probs=100.9
Q ss_pred HHHHHHHHhHh-C---C----Ce--EEEcCcHHHHHHHHH-HhcC--CCCEEEEcCCCccchHHHHH-------------
Q 019543 58 DALESLLAKLD-K---A----DR--ALCFTSGMAALAAVT-HLLG--TGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 58 ~~le~~la~~~-g---~----~~--~l~~~sG~~A~~~il-~ll~--~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
.+|++.+++++ + . ++ .+++++|+.|+..++ .++. | |+|++++|.|......++
T Consensus 75 ~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~ 153 (405)
T 3k7y_A 75 EDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFD 153 (405)
T ss_dssp HHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEE
T ss_pred HHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccc
Confidence 45666666554 2 1 22 467777789997544 4555 8 999999999877654433
Q ss_pred -------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcC------cc--
Q 019543 112 -------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSR------PL-- 140 (339)
Q Consensus 112 -------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~------~~-- 140 (339)
++|+++|++||++||+|++|....... ++
T Consensus 154 ~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~ 233 (405)
T 3k7y_A 154 YNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRK 233 (405)
T ss_dssp TTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHH
T ss_pred cccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHH
Confidence 889999999999999999996433321 11
Q ss_pred --cC-CCeEEEeccccccccCCCceEEEEE--EcChhHHHHHHH-H---HHhcCCCCChHHHHHHHhch----------h
Q 019543 141 --EL-GADIVMHSATKFIAGHSDVMAGVLA--VKGERLAKELYF-L---QNAEGSGLAPFDCWICLRGV----------K 201 (339)
Q Consensus 141 --~~-~~Di~~~S~sK~l~g~~~~~gG~v~--~~~~~l~~~l~~-~---~~~~~~~~~~~~a~~~~~~l----------~ 201 (339)
.. .--|++.||||.++.+|.++| +++ ..++++.+.+.. + .+......+.+.+.++...+ +
T Consensus 234 ~~~~~~~~i~~~S~SK~~~l~GlRiG-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~ 312 (405)
T 3k7y_A 234 FEEKNIAFSVCQSFSKNMSLYGERAG-ALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIK 312 (405)
T ss_dssp HHTTTCCEEEEEECTTTSCCTTTTEE-EEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHhcCCcEEEEeeCCccCCCccccce-EEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHH
Confidence 11 124888999999998776655 553 345556555532 2 22112222333332222222 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHh
Q 019543 202 TMALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 202 ~~~~r~~~~~~~a~~l~~~L~ 222 (339)
.+...+++..++.+.+.+.|+
T Consensus 313 ~l~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 313 ELSQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 233445556777888888888
No 218
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.54 E-value=3.7e-14 Score=135.99 Aligned_cols=207 Identities=13% Similarity=0.118 Sum_probs=131.1
Q ss_pred CCchHHHHHHHHHhHh-CCCeEEEcCcHHHHHHHHHH---hcCCCCEEEEcCCCccchHH--------------------
Q 019543 53 GNPTRDALESLLAKLD-KADRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDR-------------------- 108 (339)
Q Consensus 53 ~~~~~~~le~~la~~~-g~~~~l~~~sG~~A~~~il~---ll~~GD~Vi~~~~~y~~~~~-------------------- 108 (339)
.++...+|++++++++ +.+.+++++||++|+..++. ...+++.|++.++.|++...
T Consensus 91 ~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 170 (429)
T 4e77_A 91 PTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPG 170 (429)
T ss_dssp CCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTT
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCC
Confidence 4678899999999998 56789999999999975443 23466788887666654321
Q ss_pred ----------------------HHH----------------------------HHHHHHHHHcCCEEEEeCCcC---CCC
Q 019543 109 ----------------------LLS----------------------------RKIAEMAHAHGALLLVDNSIM---SPV 135 (339)
Q Consensus 109 ----------------------~~~----------------------------~~I~~la~~~g~~livD~a~a---~g~ 135 (339)
.+. ++|.++|++||++||+||+|+ .|.
T Consensus 171 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~ 250 (429)
T 4e77_A 171 VPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVAL 250 (429)
T ss_dssp SCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBT
T ss_pred CCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCc
Confidence 110 889999999999999999997 221
Q ss_pred Cc--CcccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH---HhcCCCCChHHHHHHHhchhhH--HHHHH
Q 019543 136 LS--RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTM--ALRVE 208 (339)
Q Consensus 136 ~~--~~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~---~~~~~~~~~~~a~~~~~~l~~~--~~r~~ 208 (339)
.. .......|++ |+||.+++ | ..+|++++++ ++++.+.... ...+...+++.++.+...|+.+ +...+
T Consensus 251 ~~~~~~~~~~pdi~--t~sK~~~~-G-~~~G~~~~~~-~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 325 (429)
T 4e77_A 251 AGAQDYYHVIPDLT--CLGKIIGG-G-MPVGAFGGRR-EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYE 325 (429)
T ss_dssp TCHHHHTTCCCSEE--EEEGGGGT-T-SCCEEEEECH-HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHH
T ss_pred chHHHhcCCCCCee--eecccccC-C-CCeEEEEECH-HHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 11 1112234664 78999994 4 4567887764 6666554321 1123467787777666666543 34455
Q ss_pred HHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCH--------------HHHHHHHc
Q 019543 209 KQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--------------ALSKHVVE 270 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~--------------~~~~~~~~ 270 (339)
+.+++.+++.+.|++. +.+.. .++.|.++++.+.+. ..+.++.+
T Consensus 326 ~~~~~~~~l~~~L~~~~~~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (429)
T 4e77_A 326 TLTELTDSLATGLRHAAKEENIPLV------------------VNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFH 387 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCE------------------EEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceE------------------EEEeeeEEEEEEccCcccccccccccccHHHHHHHHH
Confidence 5666666676666542 22111 123467777776432 34467777
Q ss_pred cCCcceeecccC
Q 019543 271 TTKYFSITVSFG 282 (339)
Q Consensus 271 ~L~~~~i~v~~G 282 (339)
.|...|+.++.+
T Consensus 388 ~l~~~Gi~v~~~ 399 (429)
T 4e77_A 388 LMLEEGVYLAPS 399 (429)
T ss_dssp HHHHTTEECCSS
T ss_pred HHHHCCeEEeec
Confidence 777778776643
No 219
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.50 E-value=4.3e-13 Score=128.32 Aligned_cols=205 Identities=18% Similarity=0.134 Sum_probs=134.4
Q ss_pred CCchHHHHHHHHHhHh-CCCeEEEcCcHHHHHHHHHH---hcCCCCEEEEcCCCccchH---------------------
Q 019543 53 GNPTRDALESLLAKLD-KADRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTD--------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~-g~~~~l~~~sG~~A~~~il~---ll~~GD~Vi~~~~~y~~~~--------------------- 107 (339)
.++..++|++++++++ +.+.+++++||++|+.+++. .+.++|.|++.++.|++..
T Consensus 90 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g 169 (424)
T 2e7u_A 90 PSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAG 169 (424)
T ss_dssp CCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTT
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCC
Confidence 4677899999999999 67889999999999975443 2445677888787765410
Q ss_pred ---------------------HHHH----------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-c
Q 019543 108 ---------------------RLLS----------------------------RKIAEMAHAHGALLLVDNSIMSPVL-S 137 (339)
Q Consensus 108 ---------------------~~~~----------------------------~~I~~la~~~g~~livD~a~a~g~~-~ 137 (339)
..+. ++|.++ ++||++||+||+|+ |.. +
T Consensus 170 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~~~g 247 (424)
T 2e7u_A 170 VPEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GFRLA 247 (424)
T ss_dssp CCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TTTSS
T ss_pred CCCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-ccccc
Confidence 0110 889999 99999999999997 331 1
Q ss_pred Cc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH--hc-CCCCChHHHHHHHhchhhH---HHH
Q 019543 138 RP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AE-GSGLAPFDCWICLRGVKTM---ALR 206 (339)
Q Consensus 138 ~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~-~~~~~~~~a~~~~~~l~~~---~~r 206 (339)
.. .....|++ |+||++++ | ..+|++++++ ++++.+..... .. +...+|+.++++...++.+ +..
T Consensus 248 ~~~~~~~~~~~~di~--s~sK~l~~-G-~~~G~~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 322 (424)
T 2e7u_A 248 FGGATELLGLKPDLV--TLGKILGG-G-LPAAAYAGRR-EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGY 322 (424)
T ss_dssp TTHHHHHHTCCCSEE--EECGGGGT-T-SSCEEEEECH-HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHH
T ss_pred hhHHHHHhCCCcchh--hhhhhhhC-C-cceEEEEEcH-HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence 11 12235765 88999995 4 4577888764 66665543111 11 2356777766666666554 335
Q ss_pred HHHHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-------------HHHHHHHH
Q 019543 207 VEKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-------------LALSKHVV 269 (339)
Q Consensus 207 ~~~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-------------~~~~~~~~ 269 (339)
.++..++.+++.+.|++. +.+..+ ++.|.+++|.+.+ ...+.++.
T Consensus 323 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (424)
T 2e7u_A 323 YAYLEDLGARLEAGLKEVLKEKGLPHTV------------------NRVGSMITVFFTEGPVVTFQDARRTDTELFKRFF 384 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCEE------------------EEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEE------------------EeeceEEEEEEeCCCCcchhhhcccCHHHHHHHH
Confidence 666677778888877653 221111 1256788988743 23456788
Q ss_pred ccCCcceeecccC
Q 019543 270 ETTKYFSITVSFG 282 (339)
Q Consensus 270 ~~L~~~~i~v~~G 282 (339)
+.|.+.|+.++.|
T Consensus 385 ~~l~~~Gv~v~~~ 397 (424)
T 2e7u_A 385 HGLLDRGIYWPPS 397 (424)
T ss_dssp HHHHTTTEECCSS
T ss_pred HHHHHCCeEEecc
Confidence 8777778876643
No 220
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.50 E-value=3.4e-13 Score=130.26 Aligned_cols=203 Identities=16% Similarity=0.121 Sum_probs=126.3
Q ss_pred CCchHHHHHHHHHhHh-CCCeEEEcCcHHHHHHHHHHh---cCCCCEEEEcCCCccchH-----------------H---
Q 019543 53 GNPTRDALESLLAKLD-KADRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTD-----------------R--- 108 (339)
Q Consensus 53 ~~~~~~~le~~la~~~-g~~~~l~~~sG~~A~~~il~l---l~~GD~Vi~~~~~y~~~~-----------------~--- 108 (339)
..+..+++.+++++.+ +.+.+++++||++|+.+++.+ +.++|+|++.++.|++.. .
T Consensus 95 ~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~ 174 (453)
T 2cy8_A 95 SHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLP 174 (453)
T ss_dssp SCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHHHCCCEEEEECC---------------------------
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCc
Confidence 4556677777777776 677899999999999854433 444567777777776310 0
Q ss_pred -------------------HHH----------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCc-
Q 019543 109 -------------------LLS----------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRP- 139 (339)
Q Consensus 109 -------------------~~~----------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~- 139 (339)
.+. ++|.++|++||++||+||+|+ |.. +..
T Consensus 175 ~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~ 253 (453)
T 2cy8_A 175 ETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GFRVGNHG 253 (453)
T ss_dssp -CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTCTTH
T ss_pred cccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-ccccCchh
Confidence 010 889999999999999999997 331 111
Q ss_pred ----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHH---H--HHhcCCCCChHHHHHHHhchhh-H-HHHHH
Q 019543 140 ----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF---L--QNAEGSGLAPFDCWICLRGVKT-M-ALRVE 208 (339)
Q Consensus 140 ----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~---~--~~~~~~~~~~~~a~~~~~~l~~-~-~~r~~ 208 (339)
.....|++ |+||++++ | ..+|++++++ ++++.+.. . ....+...+|+.++++...|+. + +...+
T Consensus 254 ~~~~~~~~~di~--s~sK~l~~-G-~~~G~v~~~~-~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~~~~~~~ 328 (453)
T 2cy8_A 254 MQALLDVQPDLT--CLAKASAG-G-LPGGILGGRE-DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCA 328 (453)
T ss_dssp HHHHHTCCCSEE--EEEGGGGT-T-SSCEEEEECH-HHHTTSSSCC---------CCCCHHHHHHHHHHHHHHHHTTHHH
T ss_pred hhHHhCCCCcEE--EEChhhhC-C-cceEEEechH-HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHhhhhHHH
Confidence 12235765 78999996 3 4578888874 66665543 1 1112345678777766666665 3 34456
Q ss_pred HHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-------------------HHHH
Q 019543 209 KQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-------------------LALS 265 (339)
Q Consensus 209 ~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-------------------~~~~ 265 (339)
+..++.+++.+.|++. +.+.. . ++.|.+++|.+.+ ....
T Consensus 329 ~~~~~~~~l~~~L~~~~~~~~~~~~--~----------------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (453)
T 2cy8_A 329 KINDLGQFAREAMNHLFARKGLNWL--A----------------YGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMI 390 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEE--E----------------ECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCcEE--E----------------EEeeeEEEEEEeccccccccccccccccccccHHHH
Confidence 6667777777777653 22111 1 2356789998753 2235
Q ss_pred HHHHccCCcceeec
Q 019543 266 KHVVETTKYFSITV 279 (339)
Q Consensus 266 ~~~~~~L~~~~i~v 279 (339)
.+|.+.|...|+.+
T Consensus 391 ~~l~~~l~~~Gv~v 404 (453)
T 2cy8_A 391 AAMRMALILEGVDI 404 (453)
T ss_dssp HHHHHHHHHTTEEC
T ss_pred HHHHHHHHHCCeEE
Confidence 66777776667655
No 221
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.50 E-value=1.7e-12 Score=127.53 Aligned_cols=170 Identities=16% Similarity=0.167 Sum_probs=109.3
Q ss_pred HHHHHHHHhHhCCC--eEEEcCcHHHHHHHHHHhc--------C-CCC------EEEEcCCCccchHHHHH---------
Q 019543 58 DALESLLAKLDKAD--RALCFTSGMAALAAVTHLL--------G-TGE------EIVAGDDLYGGTDRLLS--------- 111 (339)
Q Consensus 58 ~~le~~la~~~g~~--~~l~~~sG~~A~~~il~ll--------~-~GD------~Vi~~~~~y~~~~~~~~--------- 111 (339)
+++.+++++++|.+ .+++++||++|+...+..+ + +|| +|++++..|......+.
T Consensus 151 ~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v 230 (515)
T 2jis_A 151 EEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSV 230 (515)
T ss_dssp HHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGE
T ss_pred HHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcE
Confidence 34455688899875 6788888899987543322 2 586 88888765543321110
Q ss_pred ------------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc----
Q 019543 112 ------------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP---- 139 (339)
Q Consensus 112 ------------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~---- 139 (339)
++|.++|++||+++++|++|+.+....+
T Consensus 231 ~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~ 310 (515)
T 2jis_A 231 RVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRH 310 (515)
T ss_dssp EEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG
T ss_pred EEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHh
Confidence 9999999999999999999987654321
Q ss_pred -c-cC-CCeEEEeccccccccCCCceEEEEEEcCh-hHHHHHHH-HHH-hcCC-------------------CCChHHHH
Q 019543 140 -L-EL-GADIVMHSATKFIAGHSDVMAGVLAVKGE-RLAKELYF-LQN-AEGS-------------------GLAPFDCW 194 (339)
Q Consensus 140 -~-~~-~~Di~~~S~sK~l~g~~~~~gG~v~~~~~-~l~~~l~~-~~~-~~~~-------------------~~~~~~a~ 194 (339)
+ .. ++|++++|++|+++++.+ .|+++++++ .+.+.... ... ..+. ....+..+
T Consensus 311 ~~~g~~~aD~v~~s~hK~l~~p~g--~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~ 388 (515)
T 2jis_A 311 LLDGIQRADSVAWNPHKLLAAGLQ--CSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLW 388 (515)
T ss_dssp GGTTGGGCSEEEECTTSTTCCCSC--CEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHH
T ss_pred hcCCCccCCEEEECcccccCCCCC--eeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHH
Confidence 2 22 689999999999986643 478888765 35443211 000 1010 01122233
Q ss_pred HHHhch--hhHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 019543 195 ICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKK 229 (339)
Q Consensus 195 ~~~~~l--~~~~~r~~~~~~~a~~l~~~L~~~~~i~~ 229 (339)
.+++.+ +.+....++..++++++.+.|++.++++.
T Consensus 389 ~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 425 (515)
T 2jis_A 389 LMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFEL 425 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 333322 34566677788899999999999888754
No 222
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.49 E-value=1.5e-13 Score=131.51 Aligned_cols=205 Identities=14% Similarity=0.155 Sum_probs=128.0
Q ss_pred CCchHHHHHHHHHhHh-CCCeEEEcCcHHHHHHHHHH---hcCCCCEEEEcCCCccchH---------------------
Q 019543 53 GNPTRDALESLLAKLD-KADRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTD--------------------- 107 (339)
Q Consensus 53 ~~~~~~~le~~la~~~-g~~~~l~~~sG~~A~~~il~---ll~~GD~Vi~~~~~y~~~~--------------------- 107 (339)
.++...+|++++++++ +.+.+++++||++|+.+++. ....+++|++.++.|++..
T Consensus 90 ~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 169 (427)
T 3fq8_A 90 PCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPG 169 (427)
T ss_dssp CCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSS
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCC
Confidence 5678899999999998 46788999999999985442 2334578888777665310
Q ss_pred ---------------------HHHH----------------------------HHHHHHHHHcCCEEEEeCCcCCCC-Cc
Q 019543 108 ---------------------RLLS----------------------------RKIAEMAHAHGALLLVDNSIMSPV-LS 137 (339)
Q Consensus 108 ---------------------~~~~----------------------------~~I~~la~~~g~~livD~a~a~g~-~~ 137 (339)
..+. ++|.++|++||++||+||+|+ +. .+
T Consensus 170 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~~~g 248 (427)
T 3fq8_A 170 VPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GFRIA 248 (427)
T ss_dssp SCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BTTTB
T ss_pred CCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-ccccC
Confidence 1111 899999999999999999996 22 11
Q ss_pred C-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHH-hc--CCCCChHHHHHHHhchhhH--HHHH
Q 019543 138 R-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AE--GSGLAPFDCWICLRGVKTM--ALRV 207 (339)
Q Consensus 138 ~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~-~~--~~~~~~~~a~~~~~~l~~~--~~r~ 207 (339)
. ......|+ .|+||++++ | ..+|+++++ +++++.+..... .. +...+++.++.+...++.+ +...
T Consensus 249 ~~~~~~~~~~~~di--~t~sK~~~~-G-~~~G~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~ 323 (427)
T 3fq8_A 249 YGGVQEKFGVTPDL--TTLGKIIGG-G-LPVGAYGGK-REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTY 323 (427)
T ss_dssp TTHHHHHTTCCCSE--EEECGGGGT-T-SSCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHH
T ss_pred cchhhHhcCCCCCh--hhhhhhhhC-C-cceEEEEEc-HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHH
Confidence 1 11223465 577899994 4 456788776 466665543211 12 2345777766666666543 3345
Q ss_pred HHHHHHHHHHHHHHhCC----CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-------------HHHHHHHHc
Q 019543 208 EKQQDNAQKIAEFLASH----PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-------------LALSKHVVE 270 (339)
Q Consensus 208 ~~~~~~a~~l~~~L~~~----~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-------------~~~~~~~~~ 270 (339)
++.+++.+++.+.|++. +.... .++.+.+++|.+.+ .+...++.+
T Consensus 324 ~~~~~~~~~~~~~l~~~~~~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 385 (427)
T 3fq8_A 324 EYLDQITKRLSDGLLAIAQETGHAAC------------------GGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHR 385 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCE------------------EEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeE------------------EEEeeeEEEEEEecCccccccccccccHHHHHHHHH
Confidence 55666666666666542 21110 12245677776522 223456777
Q ss_pred cCCcceeeccc
Q 019543 271 TTKYFSITVSF 281 (339)
Q Consensus 271 ~L~~~~i~v~~ 281 (339)
.|...|+.++.
T Consensus 386 ~l~~~Gi~v~~ 396 (427)
T 3fq8_A 386 GMLEQGIYLAP 396 (427)
T ss_dssp HHHHTTEECCS
T ss_pred HHHHCCcEEec
Confidence 77667776653
No 223
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.46 E-value=1.1e-12 Score=127.55 Aligned_cols=167 Identities=14% Similarity=0.173 Sum_probs=102.3
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc--c-cCC----CeEEEeccccc-cccCCCceEEEEEEcChhHHHHHHHHHH
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP--L-ELG----ADIVMHSATKF-IAGHSDVMAGVLAVKGERLAKELYFLQN 182 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~--~-~~~----~Di~~~S~sK~-l~g~~~~~gG~v~~~~~~l~~~l~~~~~ 182 (339)
++|.++|++||+++|+||+|. .|..+.. . ..+ .|++ ||||+ ++ ||+++ + +++. .+... .
T Consensus 282 ~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~--t~sK~~l~------GG~~~-~-~~~~-~~~~~-~ 349 (472)
T 1ohv_A 282 RKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVM--TFSKKMMT------GGFFH-K-EEFR-PNAPY-R 349 (472)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEE--EECGGGSS------EEEEE-C-GGGS-CSSSS-S
T ss_pred HHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEE--EEcccccc------CCccC-c-hhhc-ccccc-c
Confidence 899999999999999999996 3332221 1 123 5765 68899 55 47776 4 3442 11111 1
Q ss_pred hcC-CCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHhCC----CC-ceEEecCCCCCCCchHhHhhhcCCCcce
Q 019543 183 AEG-SGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASH----PR-VKKVNYAGLPEHPGHELHYSQAKGAGSV 254 (339)
Q Consensus 183 ~~~-~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~~L~~~----~~-i~~v~~p~~~~~~~~~~~~~~~~~~~~i 254 (339)
..+ ...+|..++.+...|+.+. ...++.+++.+++.+.|+++ |. +..+ ++.|.+
T Consensus 350 ~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~------------------~~~g~~ 411 (472)
T 1ohv_A 350 IFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRV------------------RGRGTF 411 (472)
T ss_dssp SCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEE------------------EEETTE
T ss_pred ccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEee------------------cCCceE
Confidence 123 3457776666666665442 23455566667777776643 21 2111 235678
Q ss_pred EEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHH
Q 019543 255 LSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 334 (339)
Q Consensus 255 vs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al 334 (339)
++|.+.+.....+|++.|.+.|+.+..+ ..+.|||++++.++++.|+.+.++|
T Consensus 412 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------------------------g~~~iRi~~~~~~t~e~i~~~~~~l 464 (472)
T 1ohv_A 412 CSFDTPDESIRNKLISIARNKGVMLGGC---------------------------GDKSIRFRPTLVFRDHHAHLFLNIF 464 (472)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTEECEEE---------------------------TTTEEEECCCTTCCHHHHHHHHHHH
T ss_pred EEEEeCChhHHHHHHHHHHHCCeEEecC---------------------------CCCEEEEECCCCCCHHHHHHHHHHH
Confidence 8888866555667888776666654321 1368999999887777776666666
Q ss_pred h
Q 019543 335 R 335 (339)
Q Consensus 335 ~ 335 (339)
+
T Consensus 465 ~ 465 (472)
T 1ohv_A 465 S 465 (472)
T ss_dssp H
T ss_pred H
Confidence 4
No 224
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.44 E-value=3.1e-12 Score=126.67 Aligned_cols=106 Identities=15% Similarity=0.224 Sum_probs=75.6
Q ss_pred CeEEEcCcHHHHHHHHHH------hcCCCCEEEEcCCCccchHHHHH---------------------------------
Q 019543 71 DRALCFTSGMAALAAVTH------LLGTGEEIVAGDDLYGGTDRLLS--------------------------------- 111 (339)
Q Consensus 71 ~~~l~~~sG~~A~~~il~------ll~~GD~Vi~~~~~y~~~~~~~~--------------------------------- 111 (339)
+++++++++++|+..++. +++|||+|++++|.|.+......
T Consensus 166 ~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~ 245 (546)
T 2zy4_A 166 VNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPA 245 (546)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTT
T ss_pred ceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCC
Confidence 345566666888875443 47899999999998876653211
Q ss_pred ----------------------HHHHHHH--HHcCCEEEEeCCcCCCCCc--Cccc--CCCeEEEeccccccccCCCceE
Q 019543 112 ----------------------RKIAEMA--HAHGALLLVDNSIMSPVLS--RPLE--LGADIVMHSATKFIAGHSDVMA 163 (339)
Q Consensus 112 ----------------------~~I~~la--~~~g~~livD~a~a~g~~~--~~~~--~~~Di~~~S~sK~l~g~~~~~g 163 (339)
++|+++| ++||++||+|++|+..... .... .+.+|++.||||.+|.+|. +.
T Consensus 246 ~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~Gl-Ri 324 (546)
T 2zy4_A 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGW-RL 324 (546)
T ss_dssp EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGG-CE
T ss_pred CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCc-ce
Confidence 7789998 7899999999999754321 1111 1457999999999986664 56
Q ss_pred EEEEEcChhHHHHH
Q 019543 164 GVLAVKGERLAKEL 177 (339)
Q Consensus 164 G~v~~~~~~l~~~l 177 (339)
|+++++++++++.+
T Consensus 325 G~~~~~~~~l~~~l 338 (546)
T 2zy4_A 325 GVVAAHQQNVFDLA 338 (546)
T ss_dssp EEEEEESSCHHHHH
T ss_pred EEEEECCHHHHHHH
Confidence 78888764466655
No 225
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.44 E-value=1.4e-12 Score=132.07 Aligned_cols=167 Identities=15% Similarity=0.068 Sum_probs=115.5
Q ss_pred chHHHHHHHHHhHhCCCeEEEcCcH-HHHHHH-HHHhcCCCCEEEEcCCCccch--------------------------
Q 019543 55 PTRDALESLLAKLDKADRALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGT-------------------------- 106 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~sG-~~A~~~-il~ll~~GD~Vi~~~~~y~~~-------------------------- 106 (339)
..+.++|+.+|+++|+++++++++| ++||.+ +.++++|||+|+++++.|...
T Consensus 195 g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi~~~ 274 (715)
T 3n75_A 195 GPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGG 274 (715)
T ss_dssp THHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCCBCC
T ss_pred HHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEeccccccccccC
Confidence 4689999999999999999999999 588875 556899999999987754211
Q ss_pred -------HH----HHH-------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-c------CcccCC
Q 019543 107 -------DR----LLS-------------------------RKIAEMAHAHGALLLVDNSIMSPVL-S------RPLELG 143 (339)
Q Consensus 107 -------~~----~~~-------------------------~~I~~la~~~g~~livD~a~a~g~~-~------~~~~~~ 143 (339)
.. .+. ++|.++|++++ +++|+||+.+.. . ..+..+
T Consensus 275 i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~al~~g 352 (715)
T 3n75_A 275 IPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGG 352 (715)
T ss_dssp CCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSSTTSSS
T ss_pred cccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEccccccccccCCccccccccccC
Confidence 11 110 88999997664 799999987642 1 122223
Q ss_pred --CeEE---EeccccccccCCCceEEEEEEcChhHHHHHHHHHHh-cCCCCChHHHHHHHhc---hh--hHHHHHHHHHH
Q 019543 144 --ADIV---MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGSGLAPFDCWICLRG---VK--TMALRVEKQQD 212 (339)
Q Consensus 144 --~Di~---~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~-~~~~~~~~~a~~~~~~---l~--~~~~r~~~~~~ 212 (339)
+|++ ++|+||+++++ ..||++.++++....++...... .++.+++...+.+..+ ++ .-.+++++..+
T Consensus 353 ~~aD~vii~~~S~hKtL~gl--tqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~ 430 (715)
T 3n75_A 353 RVEGKVIYETQSTHKLLAAF--SQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIE 430 (715)
T ss_dssp CCTTCEEEEEECHHHHSSCC--TTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred cCCCEEEEEEecccccccCC--CCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 5765 89999999965 35788888764223344444443 4566666544333323 33 23556788889
Q ss_pred HHHHHHHHHhCCC
Q 019543 213 NAQKIAEFLASHP 225 (339)
Q Consensus 213 ~a~~l~~~L~~~~ 225 (339)
+++++++.|++++
T Consensus 431 ~a~~~r~~L~~i~ 443 (715)
T 3n75_A 431 RAIKFRKEIKRLR 443 (715)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999888765
No 226
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.43 E-value=3.7e-12 Score=120.20 Aligned_cols=235 Identities=14% Similarity=0.093 Sum_probs=142.5
Q ss_pred chHHHHHHHHHhHhCCC--eEEEc--CcHHHHHHH-HHHhcCC--CCEEEEcCCCccchHH--HHH--------------
Q 019543 55 PTRDALESLLAKLDKAD--RALCF--TSGMAALAA-VTHLLGT--GEEIVAGDDLYGGTDR--LLS-------------- 111 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~--~~l~~--~sG~~A~~~-il~ll~~--GD~Vi~~~~~y~~~~~--~~~-------------- 111 (339)
...++.++.+++++|++ +-++| .||+.++.+ +..++.+ ||+|++....+.+... ..+
T Consensus 58 ~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~ 137 (377)
T 3e77_A 58 KIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGS 137 (377)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCC
Confidence 45678889999999975 33444 467999875 4557655 9998776543333211 111
Q ss_pred -------------------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEeccccccccCC
Q 019543 112 -------------------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAGHS 159 (339)
Q Consensus 112 -------------------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK~l~g~~ 159 (339)
.-| +|+++|+++++|.+++.|.. .+...+ |++++|.+|++|++|
T Consensus 138 ~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi--i~~~~~~~~~vD~~q~~g~~~id~~~~--~~~~~s~~K~~gp~G 213 (377)
T 3e77_A 138 YTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF--IPDVKGAVLVCDMSSNFLSKPVDVSKF--GVIFAGAQKNVGSAG 213 (377)
T ss_dssp SCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS--CCCCTTCCEEEECTTTTTSSCCCGGGC--SEEEEEGGGTTSCTT
T ss_pred cCCCCChHHhccCCCccEEEEeCccCchheEchh--hhccCCCEEEEEcccccCCCCCchhhc--CEEEEecccccCCCc
Confidence 223 57889999999999998864 233333 478899999996433
Q ss_pred CceEEEEEEcChhHHHHH----------HHHHH-hcCCCCChHH-HHHHHhchh------hHHHHHHHHHHHHHHHHHHH
Q 019543 160 DVMAGVLAVKGERLAKEL----------YFLQN-AEGSGLAPFD-CWICLRGVK------TMALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 160 ~~~gG~v~~~~~~l~~~l----------~~~~~-~~~~~~~~~~-a~~~~~~l~------~~~~r~~~~~~~a~~l~~~L 221 (339)
.|+++.+++ +.+++ ..... ......++.. .+.+..+++ -++.+.++..+.++++.+.|
T Consensus 214 ---~g~l~~~~~-~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L 289 (377)
T 3e77_A 214 ---VTVVIVRDD-LLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEII 289 (377)
T ss_dssp ---CEEEEEETT-SCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cEEEEEcHH-HHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 356766653 22111 11111 1111223322 222222222 24556666778889999999
Q ss_pred hCCCCceEEecCCCCCCCchHhHhhhcCCCc-ceEEEeeCC----HHHHHHHHccCCcceeecccCCcccceeccccccC
Q 019543 222 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAG-SVLSFLTGS----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH 296 (339)
Q Consensus 222 ~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~-~ivs~~~~~----~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h 296 (339)
++.+++.. .|. ++. ..+ .+++|.+++ .+-...|.+.+...|+.+..|.
T Consensus 290 ~~~~g~~~--~~~---~~~---------~rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~------------- 342 (377)
T 3e77_A 290 DNSQGFYV--CPV---EPQ---------NRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGH------------- 342 (377)
T ss_dssp HTSTTSEE--CCS---CGG---------GBCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCC-------------
T ss_pred HhcCCcee--cCC---CHH---------HcCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCC-------------
Confidence 99887642 221 111 133 469998864 2222457776666777665432
Q ss_pred CCCCHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 297 ASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 297 ~~~~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
. ..+.+|+|++..++++.|+.|.++|++
T Consensus 343 ~------------~~g~iRiS~~~~~t~edId~l~~al~~ 370 (377)
T 3e77_A 343 R------------SVGGIRASLYNAVTIEDVQKLAAFMKK 370 (377)
T ss_dssp T------------TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred C------------cCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 0 124599999999888888888888875
No 227
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.11 E-value=2.3e-14 Score=138.95 Aligned_cols=211 Identities=16% Similarity=0.094 Sum_probs=135.6
Q ss_pred CCCchHHHHHHHHHhHh-CCCeEEEcCcHHHHHHHHHHhc---CCCCEEEEcCCCccchHH-------------------
Q 019543 52 SGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVTHLL---GTGEEIVAGDDLYGGTDR------------------- 108 (339)
Q Consensus 52 ~~~~~~~~le~~la~~~-g~~~~l~~~sG~~A~~~il~ll---~~GD~Vi~~~~~y~~~~~------------------- 108 (339)
+.++...+|+++|++++ +.+.+++++||++|+.+++.++ ..+|+||+.+..|+|...
T Consensus 137 ~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~ 216 (465)
T 2yky_A 137 TQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGV 216 (465)
Confidence 34677889999999999 6788999999999998655432 456889988877754110
Q ss_pred ---------HH----H------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcc-----cCCCeE
Q 019543 109 ---------LL----S------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPL-----ELGADI 146 (339)
Q Consensus 109 ---------~~----~------------------------~~I~~la~~~g~~livD~a~a~g~~~~~~-----~~~~Di 146 (339)
.+ . ++|.++|++||++||+||+|. +..+... ....|+
T Consensus 217 ~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi 295 (465)
T 2yky_A 217 YNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADL 295 (465)
Confidence 00 0 889999999999999999998 5322211 112354
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHHH--H---HhcCCCCChHHHHHHHhchhhHH--HHHHHHHHHHHHHHH
Q 019543 147 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--Q---NAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAE 219 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~--~---~~~~~~~~~~~a~~~~~~l~~~~--~r~~~~~~~a~~l~~ 219 (339)
.||+|++++ | ...|++++++ ++++.+... . ...+...+|+.+++++..|+.+. ...++.+++.+++.+
T Consensus 296 --~t~sK~lg~-G-~piG~v~~~~-~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~ 370 (465)
T 2yky_A 296 --TTLGKYIGG-G-MSFGAFGGRR-DLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRA 370 (465)
Confidence 479999996 4 4567887775 677777651 1 12334566776666666665442 345555666777777
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC-H------------HHHHHHHccCCcceeecccC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-L------------ALSKHVVETTKYFSITVSFG 282 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~-~------------~~~~~~~~~L~~~~i~v~~G 282 (339)
.|++... .++. .. ..++.|.+++|.+.+ . +...+|.+.|.+.|+.+..+
T Consensus 371 ~L~~~~~----~~~~-~~---------~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~ 432 (465)
T 2yky_A 371 NLNRIAV----ENQA-PL---------QFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPR 432 (465)
Confidence 7765410 0110 00 013567889987753 1 12456777777777765533
No 228
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.31 E-value=8.2e-11 Score=112.63 Aligned_cols=113 Identities=13% Similarity=0.035 Sum_probs=77.2
Q ss_pred HHHHHHHHHhHh-CC------CeEEEcCcHHHHHHH-H--H-H-hcCCCCEEEEcCCCccchHHHHH-------------
Q 019543 57 RDALESLLAKLD-KA------DRALCFTSGMAALAA-V--T-H-LLGTGEEIVAGDDLYGGTDRLLS------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~-g~------~~~l~~~sG~~A~~~-i--l-~-ll~~GD~Vi~~~~~y~~~~~~~~------------- 111 (339)
..+|++.++++. |. ...+.+.+|+.|+.. + + . ++.|||+|++++|.|+....+++
T Consensus 89 ~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~ 168 (420)
T 4h51_A 89 YQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYY 168 (420)
T ss_dssp CHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECE
T ss_pred hHHHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccc
Confidence 346677777653 32 124457788888752 2 2 2 46799999999999987655443
Q ss_pred --------------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc----c---
Q 019543 112 --------------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP----L--- 140 (339)
Q Consensus 112 --------------------------------------------~~I~~la~~~g~~livD~a~a~g~~~~~----~--- 140 (339)
++|+++|+++++++++|++|....+++. .
T Consensus 169 ~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~ 248 (420)
T 4h51_A 169 DPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAAR 248 (420)
T ss_dssp EGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHH
T ss_pred cccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHH
Confidence 8999999999999999999964333211 0
Q ss_pred ---cC-CCeEEEeccccccccCCCceEEEEEEcC
Q 019543 141 ---EL-GADIVMHSATKFIAGHSDVMAGVLAVKG 170 (339)
Q Consensus 141 ---~~-~~Di~~~S~sK~l~g~~~~~gG~v~~~~ 170 (339)
.. ..-+++.||||.++.+|+++| ++++..
T Consensus 249 ~~~~~~~~~i~~~s~SK~~~~~G~RvG-~~~~~~ 281 (420)
T 4h51_A 249 LFARRGIEVLLAQSFSKNMGLYSERAG-TLSLLL 281 (420)
T ss_dssp HHHHTTCCCEEEEECTTTSCCGGGCEE-EEEEEC
T ss_pred hHHhhCceEEEEeccccccccccCceE-EEEecc
Confidence 11 123888999999998887665 555443
No 229
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.30 E-value=8.2e-11 Score=111.42 Aligned_cols=236 Identities=13% Similarity=0.061 Sum_probs=135.5
Q ss_pred CchHHHHHHHHHhHhCCC--e-EEE-cCcHHHHHHH-HHHhcCCCCEEEEcCCCccchH---------------------
Q 019543 54 NPTRDALESLLAKLDKAD--R-ALC-FTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTD--------------------- 107 (339)
Q Consensus 54 ~~~~~~le~~la~~~g~~--~-~l~-~~sG~~A~~~-il~ll~~GD~Vi~~~~~y~~~~--------------------- 107 (339)
....++.++.+++++|++ + +++ ++||+.++.+ +..++++||+|++......+..
T Consensus 71 ~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G~v~~v~~~~~~~ 150 (386)
T 3qm2_A 71 IQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYCAPQIIDAKITVD 150 (386)
T ss_dssp --CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEET
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHhCCeEEEecCcccC
Confidence 456789999999999985 3 444 2577999875 5568899998754322111100
Q ss_pred ------HHHH-----------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cCcccCCCeEEEecccccccc
Q 019543 108 ------RLLS-----------------------RKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFIAG 157 (339)
Q Consensus 108 ------~~~~-----------------------~~I~~la~~~g~~livD~a~a~g~~-~~~~~~~~Di~~~S~sK~l~g 157 (339)
..+. ..|.+++ +|+++++|.+++.|.. .+...+ |++++|.+|++|
T Consensus 151 G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~~i~--~g~~~~vDa~qs~g~~pidv~~~--~~~~~s~hK~lG- 225 (386)
T 3qm2_A 151 GKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPDFG--PEVVVTADFSSTILSAPLDVSRY--GVIYAGAQKNIG- 225 (386)
T ss_dssp TEEEECCGGGCCCCTTCSCEEECSEETTTTEECCCCCCCC--TTCCEEEECTTTTTSSCCCGGGC--SEEEEETTTTTC-
T ss_pred CCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCchhhhc--CCCEEEEEcccccCCCCCCcccc--CEEEEecccccC-
Confidence 0000 1233444 7999999999998864 233333 467899999996
Q ss_pred CCCceEEEEEEcChhHHHHH----------HHHH---HhcCC-CCChHHHH-HHHhchhh---HHHHHHHHHHHHHHHHH
Q 019543 158 HSDVMAGVLAVKGERLAKEL----------YFLQ---NAEGS-GLAPFDCW-ICLRGVKT---MALRVEKQQDNAQKIAE 219 (339)
Q Consensus 158 ~~~~~gG~v~~~~~~l~~~l----------~~~~---~~~~~-~~~~~~a~-~~~~~l~~---~~~r~~~~~~~a~~l~~ 219 (339)
|.+ .|+++.+++ +.+++ .... ..+++ ..+.+.+. .++..+.. ++...++..+.++++.+
T Consensus 226 P~G--~g~l~v~~~-~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~ 302 (386)
T 3qm2_A 226 PAG--LTLVIVRED-LLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYG 302 (386)
T ss_dssp CTT--EEEEEEEGG-GCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CCc--cEEEEECHH-HHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 433 467777653 21110 1110 11222 12222111 12222222 45555666677888999
Q ss_pred HHhCCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCCHHHHHHHHccCCcceeecccCCcccceeccccccCCCC
Q 019543 220 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 299 (339)
Q Consensus 220 ~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~ 299 (339)
.|++.+ +. ..+. ++.+ + ..++++|.+++......+...|+..||.+..|. ++
T Consensus 303 ~l~~~~-~~--~~~~---~~~~-------r-s~~iv~f~~~~~~~~~~~~~~L~~~gI~~~~g~------~~-------- 354 (386)
T 3qm2_A 303 VIDNSD-FY--RNDV---AQAN-------R-SRMNVPFQLADNTLDKVFLEESFAAGLHALKGH------RV-------- 354 (386)
T ss_dssp HHHTCS-SE--ECCB---CGGG-------B-CSSEEEEEESSGGGHHHHHHHHHHTTEECCBCC------TT--------
T ss_pred HHHHCC-Cc--ccCC---CHHH-------c-CceEEEEECCCccccHHHHHHHHHCCCEEeCCC------CC--------
Confidence 998773 21 1111 1110 1 236899998642111466666777788765442 11
Q ss_pred CHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 300 PVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 300 ~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
.+.+|+|++..++++.|+.|.++|++
T Consensus 355 -----------~~~iRiS~~~~~t~edId~l~~~l~~ 380 (386)
T 3qm2_A 355 -----------VGGMRASIYNAMPIEGVKALTDFMID 380 (386)
T ss_dssp -----------TCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred -----------cCeEEEEcCCCCCHHHHHHHHHHHHH
Confidence 13499999999888999999998875
No 230
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.26 E-value=1.5e-10 Score=108.71 Aligned_cols=231 Identities=12% Similarity=-0.006 Sum_probs=138.5
Q ss_pred chHHHHHHHHHhHhCCC---eEEE-cCcHHHHHHH-HHHhcCCCCEE--EEcCC---------------------Cccch
Q 019543 55 PTRDALESLLAKLDKAD---RALC-FTSGMAALAA-VTHLLGTGEEI--VAGDD---------------------LYGGT 106 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~---~~l~-~~sG~~A~~~-il~ll~~GD~V--i~~~~---------------------~y~~~ 106 (339)
...++.++.+++++|++ ++++ ++||+.|+.+ +..++ +||++ ++... ..++.
T Consensus 50 ~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~ 128 (361)
T 3m5u_A 50 EVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESN 128 (361)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcC
Confidence 45678888999999984 3444 4566899875 45577 88854 33211 00110
Q ss_pred H------HHHH-------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCcccCCCeEEEeccccccccCCCc
Q 019543 107 D------RLLS-------------------RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDV 161 (339)
Q Consensus 107 ~------~~~~-------------------~~I~~la~~~g~~livD~a~a~g~~~~~~~~~~Di~~~S~sK~l~g~~~~ 161 (339)
. . +. +. +++ +|+++++|.+++.|...-.+. ..|++++|.+|++| |.+
T Consensus 129 ~~~~~~~~-l~~~t~lv~~~~~e~~tG~~~~~---i~~-~~~~~~vD~~q~~g~~~id~~-~~d~~~~s~~K~~g-p~G- 200 (361)
T 3m5u_A 129 FDHIPRVE-FSDNADYAYICSNNTIYGTQYQN---YPK-TKTPLIVDASSDFFSRKVDFS-NIALFYGGVQKNAG-ISG- 200 (361)
T ss_dssp SCSCCCCC-CCTTSSEEEEESEETTTTEECSS---CCC-CSSCEEEECGGGTTSSCCCCT-TEEEEEEETTTTSS-CTT-
T ss_pred CCcCChhh-cCCCCCEEEEeCCCCCcceeCCc---ccc-cCCEEEEEcccccCCCCCCcc-cCCEEEEechhccC-CCc-
Confidence 0 0 11 32 344 499999999998886421122 46999999999996 433
Q ss_pred eEEEEEEcChhHHHHHHH--------HHH----hcCCCCChHHH-HHHHhchh------hHHHHHHHHHHHHHHHHHHHh
Q 019543 162 MAGVLAVKGERLAKELYF--------LQN----AEGSGLAPFDC-WICLRGVK------TMALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 162 ~gG~v~~~~~~l~~~l~~--------~~~----~~~~~~~~~~a-~~~~~~l~------~~~~r~~~~~~~a~~l~~~L~ 222 (339)
.|+++.++ ++.+.+.. +.. ......++... +.+..+++ .++.+.++..+.++++.+.|+
T Consensus 201 -~g~l~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~ 278 (361)
T 3m5u_A 201 -LSCIFIRK-DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECID 278 (361)
T ss_dssp -CEEEEEEH-HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred -cEEEEEcH-HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 36777765 55555432 111 01112223222 21222222 145556666778889999999
Q ss_pred CCCCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeCC---HHHHHHHHccCCcceeecccCCcccceeccccccCCCC
Q 019543 223 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 299 (339)
Q Consensus 223 ~~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~~---~~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~ 299 (339)
+++++..+..+ +.+ + ..++++|.+++ .+ ..+...|+..|+.++.|..
T Consensus 279 ~~~g~~~~~~~-----~~~-------r-s~~ivsf~~~~~~~~~--~~~~~~L~~~gI~~~~g~~--------------- 328 (361)
T 3m5u_A 279 LSNGFYKGHAD-----KKD-------R-SLMNVSFNIAKNKDLE--PLFVKEAEEAGMIGLKGHR--------------- 328 (361)
T ss_dssp TSTTSEEESSC-----GGG-------B-CSSEEEEEESSCTTHH--HHHHHHHHHTTEECCBCCT---------------
T ss_pred HCCCeeeccCC-----HHH-------c-CCeEEEEECCCchhhh--HHHHHHHHHCCCEEecCCC---------------
Confidence 98865222111 100 1 24689999865 33 3567777777887654421
Q ss_pred CHHHHHhCCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Q 019543 300 PVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 336 (339)
Q Consensus 300 ~~~~~~~~g~~~~~lRisvg~e~~~~li~~l~~al~~ 336 (339)
..+.+|+|++..++++.|+.+.++|++
T Consensus 329 ----------~~g~iRiS~~~~~t~edId~l~~al~~ 355 (361)
T 3m5u_A 329 ----------ILGGIRASIYNALNLDQVKTLCEFMKE 355 (361)
T ss_dssp ----------TTCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ----------ccCeEEEEccCCCCHHHHHHHHHHHHH
Confidence 113499999999888889999998875
No 231
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.26 E-value=1e-10 Score=113.05 Aligned_cols=234 Identities=19% Similarity=0.206 Sum_probs=139.3
Q ss_pred chHHHHHHHHHhHhC---CCeEEEcCcHHHHHHHHHH---hcCCCCEEEEcCCCccchHH--------------------
Q 019543 55 PTRDALESLLAKLDK---ADRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDR-------------------- 108 (339)
Q Consensus 55 ~~~~~le~~la~~~g---~~~~l~~~sG~~A~~~il~---ll~~GD~Vi~~~~~y~~~~~-------------------- 108 (339)
+...+|.++|.++.. .+.+.+++||+.|+...+. .......|+.-...|+|...
T Consensus 107 ~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~ 186 (456)
T 4atq_A 107 EGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFA 186 (456)
T ss_dssp HHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCC
T ss_pred HHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCcc
Confidence 344577788888875 3467888999999975432 33445677776666665310
Q ss_pred ---------------------------HHH---------------------------------HHHHHHHHHcCCEEEEe
Q 019543 109 ---------------------------LLS---------------------------------RKIAEMAHAHGALLLVD 128 (339)
Q Consensus 109 ---------------------------~~~---------------------------------~~I~~la~~~g~~livD 128 (339)
.+. ++|.++|++||+++|+|
T Consensus 187 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~D 266 (456)
T 4atq_A 187 PEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIAD 266 (456)
T ss_dssp SSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEE
T ss_pred ccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEec
Confidence 000 99999999999999999
Q ss_pred CCcC-CCCCcC-----cccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhcCCCCChHHHHHHHhchhh
Q 019543 129 NSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT 202 (339)
Q Consensus 129 ~a~a-~g~~~~-----~~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~~~~~~~~~a~~~~~~l~~ 202 (339)
|++. .|-.+. ......||++ ++|.++|. .-.|.+++++ ++.+.+.......+..-+|+.+++++..|+.
T Consensus 267 EV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lggg--~P~~av~~~~-~i~~~~~~~~~~~Tf~gnpla~aaala~L~~ 341 (456)
T 4atq_A 267 EVQSGFCRTGEWFAVDHEGVVPDIIT--MAKGIAGG--LPLSAITGRA-DLLDAVHPGGLGGTYGGNPVACAAALAAIDT 341 (456)
T ss_dssp CTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGGTT--SSCEEEEEEH-HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHH
T ss_pred ccccccCCccccccccccCCCCchhh--hhhcccCc--CCceeeEecH-HHHhcccccCCCCCCCCChHHHHhhHHHHHH
Confidence 9983 222221 1223459876 57999864 3345566654 5555443222122345578888888777776
Q ss_pred HHH--HHHHHHHHHHHHHHHHhCC---------CCceEEecCCCCCCCchHhHhhhcCCCcceEEEeeC-------CHHH
Q 019543 203 MAL--RVEKQQDNAQKIAEFLASH---------PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------SLAL 264 (339)
Q Consensus 203 ~~~--r~~~~~~~a~~l~~~L~~~---------~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ivs~~~~-------~~~~ 264 (339)
+.+ ..++.++..+++.+.|+++ +.|..| +|.|.++.|++. +.+.
T Consensus 342 i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~V------------------RG~Gl~~giel~~~~~~~~~~~~ 403 (456)
T 4atq_A 342 MEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDI------------------RGRGAMLAIELVQPGSKEPNAEL 403 (456)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEE------------------EEETTEEEEEEBCTTSCCBCHHH
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEe------------------eecceEEEEEEecCCCCCcCHHH
Confidence 532 2333334444454444432 222222 356778888762 2234
Q ss_pred HHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEecc----CCHHHHHHHHHHHHhc
Q 019543 265 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 336 (339)
Q Consensus 265 ~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~----e~~~~li~~l~~al~~ 336 (339)
+.++.+.+...|+.+...+ ...+.|||+.-+ ++.++.++.|.++|++
T Consensus 404 ~~~v~~~~~~~Gvl~~~~g-------------------------~~~~~irl~PpL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 404 TKAVAAACLKEGVIILTCG-------------------------TYGNVIRLLPPLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp HHHHHHHHHHTTEECEEEC-------------------------TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEecC-------------------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 5677777777676543211 123678887544 5556666777777764
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.21 E-value=9e-11 Score=113.22 Aligned_cols=164 Identities=16% Similarity=0.153 Sum_probs=104.5
Q ss_pred CchHHHHHHHHHhHhC-CCeEEEcCcHHHHHHHHHHh---cCCCCEEEEcCCCccchH----------------------
Q 019543 54 NPTRDALESLLAKLDK-ADRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTD---------------------- 107 (339)
Q Consensus 54 ~~~~~~le~~la~~~g-~~~~l~~~sG~~A~~~il~l---l~~GD~Vi~~~~~y~~~~---------------------- 107 (339)
++...+|++.|++++. .+.+.+++||++|+...+.+ ....+.|+.....|+|..
T Consensus 126 ~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~n 205 (454)
T 4ao9_A 126 NLLEGRLARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYN 205 (454)
T ss_dssp ESSHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTT
T ss_pred cHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCCc
Confidence 3456678888888774 56788889999999754432 223467777666665431
Q ss_pred ------HHHH----------------------------HHHHHHHHHcCCEEEEeCCcCCCCCcCc-----ccCCCeEEE
Q 019543 108 ------RLLS----------------------------RKIAEMAHAHGALLLVDNSIMSPVLSRP-----LELGADIVM 148 (339)
Q Consensus 108 ------~~~~----------------------------~~I~~la~~~g~~livD~a~a~g~~~~~-----~~~~~Di~~ 148 (339)
..++ ++|.++|++||++||+||++. |-.+.. .....|+++
T Consensus 206 d~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~t 284 (454)
T 4ao9_A 206 DAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLTT 284 (454)
T ss_dssp CHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEEE
T ss_pred hHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEEE
Confidence 1111 899999999999999999995 322211 123458764
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHHH-H-hc--CCCCChHHHHHHHhchhhH--HHHHHHHHHHHHHHHHHHh
Q 019543 149 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-N-AE--GSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLA 222 (339)
Q Consensus 149 ~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-~-~~--~~~~~~~~a~~~~~~l~~~--~~r~~~~~~~a~~l~~~L~ 222 (339)
++|.++|. .-.|++++++ ++.+.+.... . .. +..-+|+.++.++..|+.+ +...++.+++.++|.+.|+
T Consensus 285 --~gK~lggG--~Piga~~~~~-ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~ 359 (454)
T 4ao9_A 285 --LGKYIGGG--MSFGAFGGRA-DVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLN 359 (454)
T ss_dssp --EEGGGGTT--SSCEEEEECH-HHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred --eccccCCC--CcceeeeeHH-HHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHH
Confidence 78999864 3345666664 5665543211 1 12 2345688777777666654 3445666667777777766
Q ss_pred C
Q 019543 223 S 223 (339)
Q Consensus 223 ~ 223 (339)
+
T Consensus 360 ~ 360 (454)
T 4ao9_A 360 A 360 (454)
T ss_dssp H
T ss_pred H
Confidence 4
No 233
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.18 E-value=1.6e-10 Score=110.84 Aligned_cols=164 Identities=13% Similarity=0.091 Sum_probs=106.5
Q ss_pred HHHHHHHHHhHhCCCe---EEEcCcHH-HHHHHHHHhcCC----CCEEEEcCCCccchHHHHH-----------------
Q 019543 57 RDALESLLAKLDKADR---ALCFTSGM-AALAAVTHLLGT----GEEIVAGDDLYGGTDRLLS----------------- 111 (339)
Q Consensus 57 ~~~le~~la~~~g~~~---~l~~~sG~-~A~~~il~ll~~----GD~Vi~~~~~y~~~~~~~~----------------- 111 (339)
.+.++..+.++.|-+. .+++++++ .++.++++.+++ ||.|++++..+......+.
T Consensus 100 e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~ 179 (450)
T 3bc8_A 100 TNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDE 179 (450)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTE
T ss_pred HHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecCcc
Confidence 3455666666677543 36777777 445555555444 8999998875544332221
Q ss_pred --------------------------------------HHHHHHHHHcCCEEEEeCCcCCCCCc-C-----cccC-CCeE
Q 019543 112 --------------------------------------RKIAEMAHAHGALLLVDNSIMSPVLS-R-----PLEL-GADI 146 (339)
Q Consensus 112 --------------------------------------~~I~~la~~~g~~livD~a~a~g~~~-~-----~~~~-~~Di 146 (339)
++|+++|++||++++||+||+..... . .+.. ++|+
T Consensus 180 ~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~ 259 (450)
T 3bc8_A 180 LRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDA 259 (450)
T ss_dssp EECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCE
T ss_pred CCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCE
Confidence 99999999999999999999865321 1 1222 7899
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHHHHHhc-C-CCCCh-HHHHHHHh--chhhHHHHHHHHHHHHHHHHHHH
Q 019543 147 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-G-SGLAP-FDCWICLR--GVKTMALRVEKQQDNAQKIAEFL 221 (339)
Q Consensus 147 ~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~-~-~~~~~-~~a~~~~~--~l~~~~~r~~~~~~~a~~l~~~L 221 (339)
++.|.+|++..+ ..|+++..++++..+.+ ...+ + ...+| +..|..+. +.+.+.+.+++..++++++++.+
T Consensus 260 ~v~S~HK~l~a~--~~~~~l~~rd~~~~~~~---~~~~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l 334 (450)
T 3bc8_A 260 FVQSLDKNFMVP--VGGAIIAGFNEPFIQDI---SKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQL 334 (450)
T ss_dssp EEEEHHHHHSCC--SSCEEEEESCHHHHHHH---HHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCccCCCch--hccEEEEecCHHHHHHH---HHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999865 45677777765555444 3334 2 11234 33343322 34445666777788889999988
Q ss_pred hCCC
Q 019543 222 ASHP 225 (339)
Q Consensus 222 ~~~~ 225 (339)
++++
T Consensus 335 ~~~~ 338 (450)
T 3bc8_A 335 KKLA 338 (450)
T ss_dssp HHHH
T ss_pred HhhH
Confidence 8766
No 234
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.15 E-value=3.4e-09 Score=102.80 Aligned_cols=175 Identities=16% Similarity=0.219 Sum_probs=105.2
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCc-----ccCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHHHh--
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-- 183 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~-----~~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~-- 183 (339)
++|.++|++||+++|.||++. +|-.+.. .....||++ ++|.+++..-. .|.+++++ ++.+.+......
T Consensus 260 ~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t--~~K~l~gG~~P-l~av~~~~-~i~~~~~~~~~~~~ 335 (473)
T 4e3q_A 260 QAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAII--SSKNLTAGFFP-MGAVILGP-ELSKRLETAIEAIE 335 (473)
T ss_dssp HHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEE--ECGGGGTTSSC-CEEEEECH-HHHHHHHHHHHHHS
T ss_pred HHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChHH--hcccccCCCCC-cccccccH-HHHHHhcccccccc
Confidence 999999999999999999983 3322221 223458876 68999864323 45565664 677766543221
Q ss_pred -----cCCCCChHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHhC---CCCceEEecCCCCCCCchHhHhhhcCCCcc
Q 019543 184 -----EGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLAS---HPRVKKVNYAGLPEHPGHELHYSQAKGAGS 253 (339)
Q Consensus 184 -----~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a~~l~~~L~~---~~~i~~v~~p~~~~~~~~~~~~~~~~~~~~ 253 (339)
.+..-+|+.+++++..|+.+.+ ..++.++..+++.+.|+. ++.|..| +|.|.
T Consensus 336 ~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~v------------------RG~Gl 397 (473)
T 4e3q_A 336 EFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEY------------------RGIGF 397 (473)
T ss_dssp CCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSTTEEEE------------------EEETT
T ss_pred ccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcCCCeeEE------------------eecce
Confidence 1234468888888777776532 234445556666666654 3444333 34567
Q ss_pred eEEEee-CCH----------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEE----e
Q 019543 254 VLSFLT-GSL----------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----V 318 (339)
Q Consensus 254 ivs~~~-~~~----------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRis----v 318 (339)
++.|++ .+. ....++.+.+.+.|+.+... .+.|||+ +
T Consensus 398 ~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------------------------g~~i~l~PPL~i 449 (473)
T 4e3q_A 398 MWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPL----------------------------GQSVVLCPPFIL 449 (473)
T ss_dssp EEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEE----------------------------TTEEEECCCTTC
T ss_pred EEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEec----------------------------CCEEEEeCCCCC
Confidence 777875 211 12445666666656544311 1456665 3
Q ss_pred ccCCHHHHHHHHHHHHhc
Q 019543 319 GIEDVNDLISDLDKALRT 336 (339)
Q Consensus 319 g~e~~~~li~~l~~al~~ 336 (339)
+.++.+++++.|.++|++
T Consensus 450 t~~eid~~~~~l~~al~~ 467 (473)
T 4e3q_A 450 TEAQMDEMFDKLEKALDK 467 (473)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 456677777888887764
No 235
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.04 E-value=5.6e-10 Score=115.32 Aligned_cols=173 Identities=12% Similarity=0.129 Sum_probs=101.5
Q ss_pred HHHHHHHHHcCCEEEEeCCcC-CCCCcCcc-----cCCCeEEEeccccccccCCCceEEEEEEcChhHHHHHHHHH----
Q 019543 112 RKIAEMAHAHGALLLVDNSIM-SPVLSRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---- 181 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~a-~g~~~~~~-----~~~~Di~~~S~sK~l~g~~~~~gG~v~~~~~~l~~~l~~~~---- 181 (339)
++|.++|++||+++|+||++. +|..+... ....|++ +++|.++| |-...|++++++ ++++.+....
T Consensus 619 ~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDii--tlsK~L~g-G~~Plgav~~~~-~i~~~~~~~~~~~~ 694 (831)
T 4a0g_A 619 RVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIA--CFAKLLTG-GMVPLAVTLATD-AVFDSFSGDSKLKA 694 (831)
T ss_dssp HHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEE--EECGGGGT-TSSCCEEEEECH-HHHHTTCSSCGGGS
T ss_pred HHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEE--EEeccccc-CccCcEEEEECH-HHHHHHhccccccc
Confidence 899999999999999999874 44333221 2234776 58999986 312346676764 6666654311
Q ss_pred --HhcCCCCChHHHHHHHhchhhHHH--HHHHHHHHH--------HHHHHHHhCCCCceEEecCCCCCCCchHhHhhhcC
Q 019543 182 --NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNA--------QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 249 (339)
Q Consensus 182 --~~~~~~~~~~~a~~~~~~l~~~~~--r~~~~~~~a--------~~l~~~L~~~~~i~~v~~p~~~~~~~~~~~~~~~~ 249 (339)
..++.+.+|+.++.++..|+.+++ ..++..++. +.+.+.++.++.|..+.
T Consensus 695 ~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vr------------------ 756 (831)
T 4a0g_A 695 LLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVV------------------ 756 (831)
T ss_dssp CCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEE------------------
T ss_pred ceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEe------------------
Confidence 123456688888887777766532 111111111 12344455566554443
Q ss_pred CCcceEEEeeCCH--------HHHHHHHccCCcceeecccCCcccceeccccccCCCCCHHHHHhCCCCCCeEEEEeccC
Q 019543 250 GAGSVLSFLTGSL--------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE 321 (339)
Q Consensus 250 ~~~~ivs~~~~~~--------~~~~~~~~~L~~~~i~v~~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~lRisvg~e 321 (339)
+.|.++.|++.+. ..+.++.+.|.+.|+.++ | ..+.|||+..+.
T Consensus 757 g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~----------p------------------~g~~lrl~pp~~ 808 (831)
T 4a0g_A 757 VIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTR----------P------------------LGNVIYLMCGPC 808 (831)
T ss_dssp EETTEEEEEEC---------CHHHHHHHHHHHHTTEECC----------C------------------BTTEEEEECCTT
T ss_pred ecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEE----------e------------------cCCEEEEECCCC
Confidence 3567888887422 245667777777676543 2 126799996665
Q ss_pred CHHHHHHHHHHHH
Q 019543 322 DVNDLISDLDKAL 334 (339)
Q Consensus 322 ~~~~li~~l~~al 334 (339)
.+++.|+.+.++|
T Consensus 809 ~t~e~id~~~~~l 821 (831)
T 4a0g_A 809 TSPEICRRLLTKL 821 (831)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 5555444444444
No 236
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.04 E-value=1.1e-09 Score=104.37 Aligned_cols=149 Identities=12% Similarity=0.077 Sum_probs=100.7
Q ss_pred eEEEcCcHHHHHH-HHHHhcCC----CCEEEEcCCCccchHHHHH-----------------------------------
Q 019543 72 RALCFTSGMAALA-AVTHLLGT----GEEIVAGDDLYGGTDRLLS----------------------------------- 111 (339)
Q Consensus 72 ~~l~~~sG~~A~~-~il~ll~~----GD~Vi~~~~~y~~~~~~~~----------------------------------- 111 (339)
..+++++++.++. ++++.+++ ||.||+++..+......+.
T Consensus 136 ~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~ 215 (501)
T 3hl2_A 136 NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPD 215 (501)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCGG
T ss_pred cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCCC
Confidence 4677777786665 56666664 4999998875543332211
Q ss_pred --------------------HHHHHHHHHcCCEEEEeCCcCCCCC-cC-----cccCC-CeEEEeccccccccCCCceEE
Q 019543 112 --------------------RKIAEMAHAHGALLLVDNSIMSPVL-SR-----PLELG-ADIVMHSATKFIAGHSDVMAG 164 (339)
Q Consensus 112 --------------------~~I~~la~~~g~~livD~a~a~g~~-~~-----~~~~~-~Di~~~S~sK~l~g~~~~~gG 164 (339)
++|+++|++||++++||+||+.... .. .+..| +|+++.|.+|.+-.+ +.||
T Consensus 216 ~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvp--IGG~ 293 (501)
T 3hl2_A 216 CILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVP--VGGA 293 (501)
T ss_dssp GEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCC--SSCE
T ss_pred cEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceee--cCce
Confidence 9999999999999999999987642 11 22346 999999999998654 3355
Q ss_pred EEEEcChhHHHHHHHHHHhc-CCC-CChH-HHHHHH--hchhhHHHHHHHHHHHHHHHHHHHhCCC
Q 019543 165 VLAVKGERLAKELYFLQNAE-GSG-LAPF-DCWICL--RGVKTMALRVEKQQDNAQKIAEFLASHP 225 (339)
Q Consensus 165 ~v~~~~~~l~~~l~~~~~~~-~~~-~~~~-~a~~~~--~~l~~~~~r~~~~~~~a~~l~~~L~~~~ 225 (339)
.+..+++++.+++ ...+ |.. .+|. +.++.+ .+.+.+...++++.++++++.+.|+++.
T Consensus 294 ii~~~d~e~l~~~---~~~yPGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la 356 (501)
T 3hl2_A 294 IIAGFNDSFIQEI---SKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLS 356 (501)
T ss_dssp EEEESCHHHHHHH---HHTSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCHHHHHHH---HHhCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5657776665554 3333 322 2343 344433 3455677788888899999999988753
No 237
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=58.74 E-value=5.8 Score=28.16 Aligned_cols=19 Identities=16% Similarity=0.141 Sum_probs=17.5
Q ss_pred HHHHHHHHHcCCEEEEeCC
Q 019543 112 RKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a 130 (339)
.+|.++|+++|++++.|-.
T Consensus 30 ~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 30 LQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHcCCCEEeCHH
Confidence 8899999999999999963
No 238
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=53.67 E-value=46 Score=29.60 Aligned_cols=75 Identities=13% Similarity=0.117 Sum_probs=48.2
Q ss_pred chHHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 55 PTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 55 ~~~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
+....+++.|++....+-+++++.-..-...+...++.|-+|++..|.-...... ++|.++|+++|+.+++--..
T Consensus 67 ~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~e~--~~l~~~a~~~g~~~~v~~~~ 141 (330)
T 4ew6_A 67 NSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAAYKALVAGKHVFLEKPPGATLSEV--ADLEALANKQGASLFASWHS 141 (330)
T ss_dssp EEESSHHHHHHHCTTCCEEEECSCHHHHHHHHHHHHHTTCEEEECSSSCSSHHHH--HHHHHHHHHHTCCEEECCGG
T ss_pred CccCCHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEeCCCCCCHHHH--HHHHHHHHhcCCeEEEEehh
Confidence 4445677777763344444444433222234555678999999999864432222 78999999999999886544
No 239
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=52.13 E-value=8.4 Score=27.93 Aligned_cols=19 Identities=16% Similarity=0.127 Sum_probs=17.3
Q ss_pred HHHHHHHHHcCCEEEEeCC
Q 019543 112 RKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a 130 (339)
.+|.++|+++|++++.|-.
T Consensus 30 ~~I~e~A~e~gVPi~e~~~ 48 (93)
T 2vt1_B 30 LAVRKYANEVGIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHcCCCEEECHH
Confidence 8999999999999999953
No 240
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=50.98 E-value=8.1 Score=28.26 Aligned_cols=19 Identities=16% Similarity=0.268 Sum_probs=17.6
Q ss_pred HHHHHHHHHcCCEEEEeCC
Q 019543 112 RKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a 130 (339)
.+|.++|++||++++.|..
T Consensus 45 ~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 45 KRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHcCCeEEECHH
Confidence 8999999999999999964
No 241
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=49.90 E-value=8.6 Score=28.17 Aligned_cols=18 Identities=22% Similarity=0.268 Sum_probs=16.9
Q ss_pred HHHHHHHHHcCCEEEEeC
Q 019543 112 RKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~ 129 (339)
.+|.++|+++|++++.|-
T Consensus 30 ~~I~e~A~e~gVPi~e~~ 47 (98)
T 3c01_E 30 LAVRAYAEKVGVPVIVDI 47 (98)
T ss_dssp HHHHHHHHHHTCCEEECH
T ss_pred HHHHHHHHHcCCCeecCH
Confidence 889999999999999994
No 242
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=49.25 E-value=48 Score=26.40 Aligned_cols=33 Identities=24% Similarity=0.160 Sum_probs=19.5
Q ss_pred HHHHHHHHHcCCEEE--EeCCcCCCCCcCcccCCCeEEEec
Q 019543 112 RKIAEMAHAHGALLL--VDNSIMSPVLSRPLELGADIVMHS 150 (339)
Q Consensus 112 ~~I~~la~~~g~~li--vD~a~a~g~~~~~~~~~~Di~~~S 150 (339)
-++++.|+++|+.+| .|.. ..++...+|+++..
T Consensus 104 ~~~~~~ak~~g~~vi~IT~~~------~s~l~~~ad~~l~~ 138 (187)
T 3sho_A 104 VAALAGAAERGVPTMALTDSS------VSPPARIADHVLVA 138 (187)
T ss_dssp HHHHHHHHHTTCCEEEEESCT------TSHHHHHCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEeCCC------CCcchhhCcEEEEe
Confidence 456788899888665 3322 23444456766654
No 243
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=47.57 E-value=56 Score=27.35 Aligned_cols=60 Identities=10% Similarity=0.163 Sum_probs=40.3
Q ss_pred eEEEcCcHHHHHH-HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCcC
Q 019543 72 RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSIM 132 (339)
Q Consensus 72 ~~l~~~sG~~A~~-~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~a 132 (339)
++++..+...+.. .+...+++|-+|++..+......... ++|.++++++|..+++|.-..
T Consensus 52 DvVv~~~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~-~~l~~~a~~~g~~~~i~~~~~ 112 (236)
T 2dc1_A 52 DVAVEAASQQAVKDYAEKILKAGIDLIVLSTGAFADRDFL-SRVREVCRKTGRRVYIASGAI 112 (236)
T ss_dssp SEEEECSCHHHHHHHHHHHHHTTCEEEESCGGGGGSHHHH-HHHHHHHHHHCCCEEECCTTC
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCcEEEECcccCChHHHH-HHHHHHHHhcCCeEEecCccc
Confidence 4555555544443 45557789999999887554333322 688899999999988886543
No 244
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=42.54 E-value=1e+02 Score=24.89 Aligned_cols=85 Identities=20% Similarity=0.266 Sum_probs=44.9
Q ss_pred HHHHHHHHhHhCCCeEEEcCcHHHHHHH--H-HHh-----------------cCCCCEEEEcCCCccchHHHHHHHHHHH
Q 019543 58 DALESLLAKLDKADRALCFTSGMAALAA--V-THL-----------------LGTGEEIVAGDDLYGGTDRLLSRKIAEM 117 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~sG~~A~~~--i-l~l-----------------l~~GD~Vi~~~~~y~~~~~~~~~~I~~l 117 (339)
+.+++....+..++.+.++..|.++..+ + ..+ ++++|.||+-+.. +.+... -++++.
T Consensus 35 ~~l~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~DvvI~iS~S-G~t~~~--i~~~~~ 111 (200)
T 1vim_A 35 ETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETVTPRITDQDVLVGISGS-GETTSV--VNISKK 111 (200)
T ss_dssp HHHHHHHHHHHHSSCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSS-SCCHHH--HHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEEecHHHHHHHHHHHHHHhcCCeEEEeCCccccCCCCCCEEEEEeCC-CCcHHH--HHHHHH
Confidence 4455555555667889999999766532 1 112 2344544443221 112222 456788
Q ss_pred HHHcCCEEEEeCCcCCCCCcCcccCCCeEEEe
Q 019543 118 AHAHGALLLVDNSIMSPVLSRPLELGADIVMH 149 (339)
Q Consensus 118 a~~~g~~livD~a~a~g~~~~~~~~~~Di~~~ 149 (339)
|++.|+.+|.= +.....++...+|+++.
T Consensus 112 ak~~g~~vI~I----T~~~~s~La~~ad~~l~ 139 (200)
T 1vim_A 112 AKDIGSKLVAV----TGKRDSSLAKMADVVMV 139 (200)
T ss_dssp HHHHTCEEEEE----ESCTTSHHHHHCSEEEE
T ss_pred HHHCCCeEEEE----ECCCCChHHHhCCEEEE
Confidence 99999876521 11112344444676664
No 245
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=41.16 E-value=50 Score=28.51 Aligned_cols=43 Identities=16% Similarity=0.119 Sum_probs=29.9
Q ss_pred hHHHHHHHHHhHhCCCeEEEcCcH---H----HHHH-----HHHHhcCCCCEEEE
Q 019543 56 TRDALESLLAKLDKADRALCFTSG---M----AALA-----AVTHLLGTGEEIVA 98 (339)
Q Consensus 56 ~~~~le~~la~~~g~~~~l~~~sG---~----~A~~-----~il~ll~~GD~Vi~ 98 (339)
...+||++|.+.||-++++++++. . ..+. .+..++++||.|-+
T Consensus 12 ~~~~Le~~L~~~fgL~~v~Vvp~~~~~~~~~~~~lg~~aA~~L~~~l~~~~vIGv 66 (266)
T 3efb_A 12 ENLWLEQQLKQKFGLKDVVVVSGNDEDEETQLAMMGLHGAQLLDRLLEPGDIVGF 66 (266)
T ss_dssp CCHHHHHHHHHHHTCSEEEEECCCSCCHHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred cHHHHHHHHHHHhCCCEEEEEcCCCCChHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 356899999999999999998762 1 1121 12347889986655
No 246
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=40.20 E-value=1.3e+02 Score=23.60 Aligned_cols=66 Identities=20% Similarity=0.312 Sum_probs=38.5
Q ss_pred HHHHHHHHhHhCCCeEEEcCcHHHHHHH---HHHh-----------------cCCCCEEEEcCCCccchHHHHHHHHHHH
Q 019543 58 DALESLLAKLDKADRALCFTSGMAALAA---VTHL-----------------LGTGEEIVAGDDLYGGTDRLLSRKIAEM 117 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~sG~~A~~~---il~l-----------------l~~GD~Vi~~~~~y~~~~~~~~~~I~~l 117 (339)
+.+++....+..++...++..|.+...+ ...+ ++++|.||+-+.. +.+... -++++.
T Consensus 25 ~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vI~iS~s-G~t~~~--~~~~~~ 101 (186)
T 1m3s_A 25 EEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGS-GETKSL--IHTAAK 101 (186)
T ss_dssp HHHHHHHHHHHHCSCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSS-SCCHHH--HHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEecCHHHHHHHHHHHHHHhcCCeEEEeCcccccCCCCCCEEEEEcCC-CCcHHH--HHHHHH
Confidence 4566655566667889999999765432 1112 3456655543321 222222 356788
Q ss_pred HHHcCCEEE
Q 019543 118 AHAHGALLL 126 (339)
Q Consensus 118 a~~~g~~li 126 (339)
|++.|+.+|
T Consensus 102 ak~~g~~vi 110 (186)
T 1m3s_A 102 AKSLHGIVA 110 (186)
T ss_dssp HHHTTCEEE
T ss_pred HHHCCCEEE
Confidence 999998765
No 247
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=39.43 E-value=67 Score=27.98 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=32.9
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+...++.|-+|++..|.-...... ++|.++|+++|+.+++.-.+
T Consensus 82 ~~~~al~~gk~vl~EKP~~~~~~~~--~~l~~~a~~~g~~~~v~~~~ 126 (308)
T 3uuw_A 82 IIKILLNLGVHVYVDKPLASTVSQG--EELIELSTKKNLNLMVGFNR 126 (308)
T ss_dssp HHHHHHHTTCEEEECSSSSSSHHHH--HHHHHHHHHHTCCEEECCGG
T ss_pred HHHHHHHCCCcEEEcCCCCCCHHHH--HHHHHHHHHcCCEEEEeecc
Confidence 3445678899999998864432221 78899999999999987554
No 248
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=45.29 E-value=6.4 Score=28.21 Aligned_cols=20 Identities=20% Similarity=0.280 Sum_probs=18.1
Q ss_pred HHHHHHHHHcCCEEEEeCCc
Q 019543 112 RKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~ 131 (339)
.+|.++|+++|++++.|-.-
T Consensus 30 ~~I~e~A~e~~VPi~e~~~L 49 (87)
T 3b1s_B 30 QKIVEIAENYSIPVVRKPEL 49 (87)
Confidence 88999999999999999754
No 249
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=36.34 E-value=18 Score=27.61 Aligned_cols=19 Identities=16% Similarity=0.317 Sum_probs=17.6
Q ss_pred HHHHHHHHHcCCEEEEeCC
Q 019543 112 RKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a 130 (339)
.+|.++|++||++++.|-.
T Consensus 74 ~~I~~~A~e~~VPi~e~~~ 92 (123)
T 2jli_A 74 QTVRKIAEEEGVPILQRIP 92 (123)
T ss_dssp HHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHcCCCEEeCHH
Confidence 8999999999999999964
No 250
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=35.78 E-value=75 Score=27.41 Aligned_cols=41 Identities=22% Similarity=0.147 Sum_probs=29.1
Q ss_pred HHHHHHHHhHhCCCeEEEcCcH------HHHHH-----HHHHhcCCCCEEEE
Q 019543 58 DALESLLAKLDKADRALCFTSG------MAALA-----AVTHLLGTGEEIVA 98 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~sG------~~A~~-----~il~ll~~GD~Vi~ 98 (339)
.+||++|.+.||-++++++++. ...+. .+..++++||.|-+
T Consensus 10 ~~Le~~L~~~fgL~~~~Vvp~~~~~~~~~~~lg~aaA~~L~~~l~~~~vIGv 61 (267)
T 3kv1_A 10 VQLEQKLVEKFNLKRALISLDQPNTNEQRKQVAALVSSYLNNNLQEGMAVAV 61 (267)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSHHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCchHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 7999999999999999988753 12221 12347889986654
No 251
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=35.21 E-value=19 Score=28.04 Aligned_cols=19 Identities=16% Similarity=0.141 Sum_probs=17.6
Q ss_pred HHHHHHHHHcCCEEEEeCC
Q 019543 112 RKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a 130 (339)
.+|.++|++||++++.|-.
T Consensus 84 ~~I~e~A~e~gVPi~e~~~ 102 (137)
T 3bzs_A 84 LQIIKLAELYDIPVIEDIP 102 (137)
T ss_dssp HHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHcCCCEEeCHH
Confidence 8999999999999999964
No 252
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=35.18 E-value=1.3e+02 Score=24.21 Aligned_cols=51 Identities=20% Similarity=0.274 Sum_probs=26.1
Q ss_pred cCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEE--eCCcCCCCCcCcccCCCeEEEe
Q 019543 90 LGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLV--DNSIMSPVLSRPLELGADIVMH 149 (339)
Q Consensus 90 l~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~liv--D~a~a~g~~~~~~~~~~Di~~~ 149 (339)
++++|.||+-+.. +.+... -++++.|++.|+.+|. |.. ..++...+|+++.
T Consensus 90 ~~~~dvvI~iS~s-G~t~~~--~~~~~~ak~~g~~vi~IT~~~------~s~l~~~ad~~l~ 142 (201)
T 3fxa_A 90 LQKEDILILISKG-GNTGEL--LNLIPACKTKGSTLIGVTENP------DSVIAKEADIFFP 142 (201)
T ss_dssp CCTTCEEEEECSS-SCCHHH--HTTHHHHHHHTCEEEEEESCT------TSHHHHHCSEEEE
T ss_pred CCCCCEEEEEeCC-CCCHHH--HHHHHHHHHcCCeEEEEECCC------CChhHHhCCEEEE
Confidence 3456655553321 222222 3567888999887663 322 2344434666554
No 253
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=34.98 E-value=1.4e+02 Score=26.70 Aligned_cols=71 Identities=10% Similarity=0.107 Sum_probs=45.1
Q ss_pred HHHHHHHHHhHhCCCeEEEcCcHHHHH-HHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 57 RDALESLLAKLDKADRALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 57 ~~~le~~la~~~g~~~~l~~~sG~~A~-~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
...+++.+++- .. ++++.++-...- ..+...++.|-+|++..|.-...... ++|.++|+++|+.+++--.+
T Consensus 57 ~~~~~~ll~~~-~v-D~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~--~~l~~~a~~~g~~~~v~~~~ 128 (359)
T 3m2t_A 57 LDNVPAMLNQV-PL-DAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEEL--ETLIDAARRSDVVSGVGMNF 128 (359)
T ss_dssp ESSHHHHHHHS-CC-SEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHH--HHHHHHHHHHTCCEEECCHH
T ss_pred cCCHHHHhcCC-CC-CEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHH--HHHHHHHHHcCCEEEEEecc
Confidence 34466666541 23 455444443332 34555678899999999864432222 78899999999999887544
No 254
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=34.08 E-value=1.2e+02 Score=27.42 Aligned_cols=71 Identities=14% Similarity=0.170 Sum_probs=44.7
Q ss_pred HHHHHHHHhHh----CCCeEEEc-CcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 58 DALESLLAKLD----KADRALCF-TSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 58 ~~le~~la~~~----g~~~~l~~-~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
..+++.+++-. ..+-++++ ++...+ ..+...++.|-+|++..|.-...... ++|.++|+++|+.+++.-.+
T Consensus 70 ~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~-~~~~~al~aGkhVl~EKPla~~~~ea--~~l~~~a~~~g~~~~v~~~~ 145 (398)
T 3dty_A 70 ADYLSMFEQEARRADGIQAVSIATPNGTHY-SITKAALEAGLHVVCEKPLCFTVEQA--ENLRELSHKHNRIVGVTYGY 145 (398)
T ss_dssp SSHHHHHHHHTTCTTCCSEEEEESCGGGHH-HHHHHHHHTTCEEEECSCSCSCHHHH--HHHHHHHHHTTCCEEECCGG
T ss_pred CCHHHHHhcccccCCCCCEEEECCCcHHHH-HHHHHHHHCCCeEEEeCCCcCCHHHH--HHHHHHHHHcCCeEEEEecc
Confidence 34666666531 23434433 333333 23445567899999999875443222 78999999999999987554
No 255
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=33.27 E-value=64 Score=30.28 Aligned_cols=61 Identities=15% Similarity=0.184 Sum_probs=36.6
Q ss_pred CeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccc-hHHH--------------------------------HHHHHHHH
Q 019543 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGG-TDRL--------------------------------LSRKIAEM 117 (339)
Q Consensus 71 ~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~-~~~~--------------------------------~~~~I~~l 117 (339)
..++++..|..|...+-.|++.|-.|.+-++.... ...+ +...+.+.
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~~~~~n~~i~~~ 92 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDTVNQRVSDA 92 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCCCHHHHHHHHHH
Confidence 46777777777766555556666555443332111 1111 11788999
Q ss_pred HHHcCCEE-EEeCCc
Q 019543 118 AHAHGALL-LVDNSI 131 (339)
Q Consensus 118 a~~~g~~l-ivD~a~ 131 (339)
|+++|+++ ++|+..
T Consensus 93 a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 93 AESRRIFCNVVDAPK 107 (457)
T ss_dssp HHHTTCEEEETTCTT
T ss_pred HHHcCCEEEECCCcc
Confidence 99999987 567653
No 256
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=33.15 E-value=1e+02 Score=27.45 Aligned_cols=68 Identities=18% Similarity=0.158 Sum_probs=41.9
Q ss_pred HHHHHHHHhHhCCCeEEEcC-cHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeC
Q 019543 58 DALESLLAKLDKADRALCFT-SGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~-sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~ 129 (339)
..+++.+++ ...+-+++++ +...+ ..+...++.|-+|++..|.-...... ++|.++|+++|+.+.+.-
T Consensus 57 ~~~~~ll~~-~~vD~V~i~tp~~~H~-~~~~~al~aGkhV~~EKPla~~~~e~--~~l~~~a~~~g~~~~v~~ 125 (352)
T 3kux_A 57 SDPQMLFND-PSIDLIVIPTPNDTHF-PLAQSALAAGKHVVVDKPFTVTLSQA--NALKEHADDAGLLLSVFH 125 (352)
T ss_dssp SCHHHHHHC-SSCCEEEECSCTTTHH-HHHHHHHHTTCEEEECSSCCSCHHHH--HHHHHHHHHTTCCEEECC
T ss_pred CCHHHHhcC-CCCCEEEEeCChHHHH-HHHHHHHHCCCcEEEECCCcCCHHHH--HHHHHHHHHcCCeEEEEe
Confidence 345666654 1233333333 22332 23445678899999998854432222 789999999999999843
No 257
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=33.03 E-value=22 Score=27.99 Aligned_cols=19 Identities=16% Similarity=0.317 Sum_probs=17.5
Q ss_pred HHHHHHHHHcCCEEEEeCC
Q 019543 112 RKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a 130 (339)
.+|.++|++||++++.|-.
T Consensus 83 ~~I~e~A~e~gVPi~e~~~ 101 (144)
T 2jlj_A 83 QTVRKIAEEEGVPILQRIP 101 (144)
T ss_dssp HHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHcCCCEEeCHH
Confidence 8999999999999999953
No 258
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=32.59 E-value=1.1e+02 Score=26.75 Aligned_cols=44 Identities=11% Similarity=0.177 Sum_probs=32.5
Q ss_pred HHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 86 il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
+...++.|-+|++..|.-...... ++|.++|+++|..+++--..
T Consensus 89 ~~~al~aGkhVl~EKPla~~~~ea--~~l~~~a~~~g~~~~v~~~~ 132 (312)
T 3o9z_A 89 IRMALRLGANALSEKPLVLWPEEI--ARLKELEARTGRRVYTVLQL 132 (312)
T ss_dssp HHHHHHTTCEEEECSSSCSCHHHH--HHHHHHHHHHCCCEEECCGG
T ss_pred HHHHHHCCCeEEEECCCCCCHHHH--HHHHHHHHHcCCEEEEEeeh
Confidence 445678899999999865433222 78999999999999876443
No 259
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=31.50 E-value=1.1e+02 Score=26.95 Aligned_cols=44 Identities=16% Similarity=0.240 Sum_probs=32.5
Q ss_pred HHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 86 il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
+...++.|-+|++..|.-...... ++|.++|+++|+.+++--.+
T Consensus 83 ~~~al~~GkhVl~EKP~a~~~~e~--~~l~~~a~~~~~~~~v~~~~ 126 (334)
T 3ohs_X 83 VMLCLAAGKAVLCEKPMGVNAAEV--REMVTEARSRGLFLMEAIWT 126 (334)
T ss_dssp HHHHHHTTCEEEEESSSSSSHHHH--HHHHHHHHHTTCCEEEECGG
T ss_pred HHHHHhcCCEEEEECCCCCCHHHH--HHHHHHHHHhCCEEEEEEhH
Confidence 445578899999999864433222 78899999999999986543
No 260
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=31.22 E-value=1.2e+02 Score=27.08 Aligned_cols=58 Identities=10% Similarity=0.131 Sum_probs=39.3
Q ss_pred eEEEcCcHHHHH-HHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 72 RALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 72 ~~l~~~sG~~A~-~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
++++.++-...- ..+...++.|-+|++..|.-...... ++|.++|+++|+.+++.-..
T Consensus 90 D~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea--~~l~~~a~~~g~~l~v~~~~ 148 (361)
T 3u3x_A 90 GLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQL--AKLRRVQAETGRIFSILYSE 148 (361)
T ss_dssp CEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHH--HHHHHHHHTTCCCEEEECHH
T ss_pred CEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHH--HHHHHHHHHcCCEEEEechH
Confidence 455444443332 23455678899999999864433222 78999999999999988654
No 261
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=30.59 E-value=1.4e+02 Score=27.32 Aligned_cols=45 Identities=18% Similarity=0.311 Sum_probs=33.6
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+...++.|-+|+|..|.-...... ++|.++|+++|+.+++.-.+
T Consensus 126 ~~~~al~aGkhVl~EKPla~~~~ea--~~l~~~a~~~g~~~~v~~~~ 170 (417)
T 3v5n_A 126 AAKEFLKRGIHVICDKPLTSTLADA--KKLKKAADESDALFVLTHNY 170 (417)
T ss_dssp HHHHHHTTTCEEEEESSSCSSHHHH--HHHHHHHHHCSSCEEEECGG
T ss_pred HHHHHHhCCCeEEEECCCcCCHHHH--HHHHHHHHHcCCEEEEEecc
Confidence 3455678899999998864433222 78899999999999987654
No 262
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=30.59 E-value=1.7e+02 Score=25.63 Aligned_cols=72 Identities=14% Similarity=0.057 Sum_probs=44.5
Q ss_pred hHHHHHHHHHhHhCCCeEEEcCcHHHHH-HHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCE--EEEeCCc
Q 019543 56 TRDALESLLAKLDKADRALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGAL--LLVDNSI 131 (339)
Q Consensus 56 ~~~~le~~la~~~g~~~~l~~~sG~~A~-~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~--livD~a~ 131 (339)
....+++.|++- ..+ +++.++-...- ..+...++.|-+|++..|.-...... ++|.++|+++|.. +.+.-.+
T Consensus 55 ~~~~~~~ll~~~-~vD-~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea--~~l~~~a~~~g~~~~~~v~~~~ 129 (337)
T 3ip3_A 55 KYNNWWEMLEKE-KPD-ILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDL--EKIRSVYQKVRNEVFFTAMFGI 129 (337)
T ss_dssp ECSSHHHHHHHH-CCS-EEEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHH--HHHHHHHHHHTTTCCEEECCGG
T ss_pred ccCCHHHHhcCC-CCC-EEEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHH--HHHHHHHHHhCCceEEEecccc
Confidence 334566666652 334 44433332222 23455678899999999875433222 7899999999987 7776443
No 263
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=36.17 E-value=11 Score=28.43 Aligned_cols=20 Identities=20% Similarity=0.257 Sum_probs=18.0
Q ss_pred HHHHHHHHHcCCEEEEeCCc
Q 019543 112 RKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~a~ 131 (339)
.+|.++|++||++++.|-.-
T Consensus 30 ~~I~e~A~e~gVPi~e~~~L 49 (114)
T 3b0z_B 30 LRIREIGAEHRVPTLEAPPL 49 (114)
Confidence 88999999999999999654
No 264
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=29.97 E-value=2.1e+02 Score=22.68 Aligned_cols=15 Identities=20% Similarity=0.173 Sum_probs=10.5
Q ss_pred HHHHHHHHHcCCEEE
Q 019543 112 RKIAEMAHAHGALLL 126 (339)
Q Consensus 112 ~~I~~la~~~g~~li 126 (339)
-+.++.|++.|+.+|
T Consensus 126 i~~~~~ak~~g~~vI 140 (196)
T 2yva_A 126 VKAVEAAVTRDMTIV 140 (196)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHCCCEEE
Confidence 456677788887665
No 265
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=29.82 E-value=1.4e+02 Score=26.23 Aligned_cols=43 Identities=14% Similarity=0.138 Sum_probs=32.3
Q ss_pred HHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCC
Q 019543 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 86 il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a 130 (339)
+...++.|-+|++..|.-...... ++|.++|+++|..+++--.
T Consensus 90 ~~~al~aGkhVl~EKPla~~~~ea--~~l~~~a~~~g~~~~v~~~ 132 (318)
T 3oa2_A 90 IAAGLRLGCDVICEKPLVPTPEML--DQLAVIERETDKRLYNILQ 132 (318)
T ss_dssp HHHHHHTTCEEEECSSCCSCHHHH--HHHHHHHHHHTCCEEECCG
T ss_pred HHHHHHCCCeEEEECCCcCCHHHH--HHHHHHHHHhCCEEEEEEh
Confidence 444568899999999865443222 7899999999999987644
No 266
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=29.33 E-value=1.4e+02 Score=26.52 Aligned_cols=53 Identities=9% Similarity=0.096 Sum_probs=36.6
Q ss_pred cCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 76 FTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 76 ~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
+++.+.+-. +...++.|-+|+|..|.-...... ++|.++|+++|..+++--.+
T Consensus 102 tP~~~H~~~-a~~al~aGkhVl~EKPla~~~~ea--~~l~~~a~~~g~~l~vg~~~ 154 (393)
T 4fb5_A 102 TPNQFHAEM-AIAALEAGKHVWCEKPMAPAYADA--ERMLATAERSGKVAALGYNY 154 (393)
T ss_dssp SCGGGHHHH-HHHHHHTTCEEEECSCSCSSHHHH--HHHHHHHHHSSSCEEECCGG
T ss_pred CChHHHHHH-HHHHHhcCCeEEEccCCcccHHHH--HHhhhhHHhcCCcccccccc
Confidence 444454433 334467899999999865443222 78999999999999987544
No 267
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=29.24 E-value=1.2e+02 Score=26.93 Aligned_cols=44 Identities=5% Similarity=0.228 Sum_probs=32.4
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCC
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a 130 (339)
.+...++.|-+|++..|.-..... . ++|.++|+++|+.+++.-.
T Consensus 81 ~~~~al~aGk~Vl~EKP~a~~~~e-~-~~l~~~a~~~g~~~~v~~~ 124 (349)
T 3i23_A 81 LAKQAILAGKSVIVEKPFCDTLEH-A-EELFALGQEKGVVVMPYQN 124 (349)
T ss_dssp HHHHHHHTTCEEEECSCSCSSHHH-H-HHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHcCCEEEEECCCcCCHHH-H-HHHHHHHHHcCCeEEEEec
Confidence 344567889999999886443222 1 7899999999999988544
No 268
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=28.75 E-value=1.3e+02 Score=26.48 Aligned_cols=72 Identities=17% Similarity=0.192 Sum_probs=42.8
Q ss_pred HHHHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 57 RDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 57 ~~~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
...+++.+++ ...+-+++++....-...+...++.|-+|++..|.-...... ++|.++|+++|+.+++--..
T Consensus 56 ~~~~~~ll~~-~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~--~~l~~~a~~~~~~~~v~~~~ 127 (329)
T 3evn_A 56 YDKLEDMLAD-ESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQA--NELFALAESCNLFLMEAQKS 127 (329)
T ss_dssp ESCHHHHHTC-TTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHH--HHHHHHHHHTTCCEEEECSS
T ss_pred cCCHHHHhcC-CCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHH--HHHHHHHHHcCCEEEEEEcc
Confidence 3445555542 123333333332222223445678899999999864433222 78899999999999876443
No 269
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=28.23 E-value=1.2e+02 Score=26.92 Aligned_cols=45 Identities=18% Similarity=0.293 Sum_probs=32.7
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+...++.|-+|++..|.-...... ++|.++|+++|+.+++.-.+
T Consensus 105 ~~~~al~aGk~Vl~EKP~a~~~~ea--~~l~~~a~~~g~~~~v~~~~ 149 (350)
T 3rc1_A 105 WIDRALRAGKHVLAEKPLTTDRPQA--ERLFAVARERGLLLMENFMF 149 (350)
T ss_dssp HHHHHHHTTCEEEEESSSCSSHHHH--HHHHHHHHHTTCCEEEECGG
T ss_pred HHHHHHHCCCcEEEeCCCCCCHHHH--HHHHHHHHHhCCEEEEEecc
Confidence 3445567888999998864433222 78899999999999987544
No 270
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=28.17 E-value=1.2e+02 Score=27.13 Aligned_cols=70 Identities=16% Similarity=0.186 Sum_probs=42.8
Q ss_pred HHHHHHHHhHhCCCeEEEcCc-HHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 58 DALESLLAKLDKADRALCFTS-GMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~s-G~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
..+++.+++ ...+-+++++. ...+ ..+...++.|-+|++..|.-...... ++|.++|++.|+.+++.-.+
T Consensus 55 ~~~~~ll~~-~~vD~V~i~tp~~~H~-~~~~~al~aGkhVl~EKP~a~~~~ea--~~l~~~a~~~g~~~~v~~~~ 125 (362)
T 3fhl_A 55 RSFKELTED-PEIDLIVVNTPDNTHY-EYAGMALEAGKNVVVEKPFTSTTKQG--EELIALAKKKGLMLSVYQNR 125 (362)
T ss_dssp SCSHHHHTC-TTCCEEEECSCGGGHH-HHHHHHHHTTCEEEEESSCCSSHHHH--HHHHHHHHHHTCCEEEECGG
T ss_pred CCHHHHhcC-CCCCEEEEeCChHHHH-HHHHHHHHCCCeEEEecCCCCCHHHH--HHHHHHHHHcCCEEEEEecc
Confidence 345555543 12333333333 2332 23445678899999999864433222 78999999999999986543
No 271
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=28.07 E-value=1.3e+02 Score=26.96 Aligned_cols=69 Identities=17% Similarity=0.236 Sum_probs=42.1
Q ss_pred HHHHHHHhHhCCCeEEEcCcHHH-HHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 59 ALESLLAKLDKADRALCFTSGMA-ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 59 ~le~~la~~~g~~~~l~~~sG~~-A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+++.+++ ... ++++.++-.. -...+...++.|-+|++..|.-...... ++|.++|+++|+.+++--.+
T Consensus 56 ~~~~ll~~-~~~-D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea--~~l~~~a~~~g~~~~v~~~~ 125 (359)
T 3e18_A 56 SYEAVLAD-EKV-DAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDL--LAIMDVAKRVNKHFMVHQNR 125 (359)
T ss_dssp CHHHHHHC-TTC-CEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHH--HHHHHHHHHHTCCEEEECGG
T ss_pred CHHHHhcC-CCC-CEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHH--HHHHHHHHHhCCeEEEEeee
Confidence 45555553 123 3444333322 2223445677899999999864433222 78899999999999886543
No 272
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=27.65 E-value=1.4e+02 Score=27.12 Aligned_cols=44 Identities=14% Similarity=0.195 Sum_probs=32.9
Q ss_pred HHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 86 il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
++..++.|-+|++..|.-...... ++|.++|++.|..+++.-.+
T Consensus 113 ~~~al~aGkhVl~EKP~a~~~~ea--~~l~~~a~~~g~~~~v~~~~ 156 (412)
T 4gqa_A 113 AMAAIAAGKHVYCEKPLAVNEQQA--QEMAQAARRAGVKTMVAFNN 156 (412)
T ss_dssp HHHHHHTTCEEEEESCSCSSHHHH--HHHHHHHHHHTCCEEEECGG
T ss_pred HHHHHHcCCCeEeecCCcCCHHHH--HHHHHHHHHhCCeeeeccce
Confidence 344567889999999865443222 78999999999999987554
No 273
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=27.43 E-value=1.1e+02 Score=23.92 Aligned_cols=26 Identities=8% Similarity=0.058 Sum_probs=17.8
Q ss_pred HHHHHHHhHhCCC-eEEEcCcHHHHHH
Q 019543 59 ALESLLAKLDKAD-RALCFTSGMAALA 84 (339)
Q Consensus 59 ~le~~la~~~g~~-~~l~~~sG~~A~~ 84 (339)
.+++....+..++ ..+++..|.+...
T Consensus 37 ~i~~~~~~i~~a~~~I~i~G~G~S~~~ 63 (183)
T 2xhz_A 37 NFTLACEKMFWCKGKVVVMGMGASGHI 63 (183)
T ss_dssp HHHHHHHHHHTCSSCEEEEECHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEeecHHHHH
Confidence 5666666666666 7888888866543
No 274
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=26.61 E-value=1.2e+02 Score=27.23 Aligned_cols=70 Identities=10% Similarity=0.143 Sum_probs=42.9
Q ss_pred HHHHHHHHhHhCCCeEEEcCcHHH-HHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 58 DALESLLAKLDKADRALCFTSGMA-ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~sG~~-A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
..+++.+++ ... ++++.++... -...+...++.|-+|++..|.-...... ++|.++|+++|+.+++--..
T Consensus 73 ~~~~~ll~~-~~i-D~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~--~~l~~~a~~~~~~~~v~~~~ 143 (383)
T 3oqb_A 73 TDLDAALAD-KND-TMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEA--LEVVKLANSKGVKHGTVQDK 143 (383)
T ss_dssp SCHHHHHHC-SSC-CEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHH--HHHHHHHHHTTCCEEECCGG
T ss_pred CCHHHHhcC-CCC-CEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHH--HHHHHHHHHcCCeEEEEecc
Confidence 345555554 122 4444333321 1223455678999999998864432221 78999999999998876543
No 275
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=26.54 E-value=59 Score=29.69 Aligned_cols=43 Identities=14% Similarity=0.309 Sum_probs=32.7
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+..+++.|-+|++..|+ +..-. +++.++|+++|+.+++.--+
T Consensus 86 ~a~~al~aGkhVl~EKPl---~~~ea-~~l~~~A~~~g~~~~v~~~y 128 (372)
T 4gmf_A 86 LARHFLARGVHVIQEHPL---HPDDI-SSLQTLAQEQGCCYWINTFY 128 (372)
T ss_dssp HHHHHHHTTCEEEEESCC---CHHHH-HHHHHHHHHHTCCEEEECSG
T ss_pred HHHHHHHcCCcEEEecCC---CHHHH-HHHHHHHHHcCCEEEEcCcc
Confidence 455578899999999996 12211 78999999999999987543
No 276
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=26.47 E-value=1.7e+02 Score=26.40 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=41.9
Q ss_pred HHHHHHHhHhCCCeEEEcCcHHHHHHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 59 ALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 59 ~le~~la~~~g~~~~l~~~sG~~A~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+++.+++ ...+-+++++.-..-...+...++.|-+|++..|.-...... ++|.++|+++|+.+++--.+
T Consensus 55 ~~~ell~~-~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~--~~l~~~a~~~g~~~~v~~~~ 124 (387)
T 3moi_A 55 TLAEMMQH-VQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEA--DRMIEAVERAGVHLVVGTSR 124 (387)
T ss_dssp SHHHHHHH-SCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHH--HHHHHHHHHHTCCEEECCCG
T ss_pred CHHHHHcC-CCCCEEEEcCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHH--HHHHHHHHHhCCeEEEEecc
Confidence 35555543 223333333332222223455678899999999864432222 78899999999999876543
No 277
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=26.24 E-value=1.5e+02 Score=26.11 Aligned_cols=45 Identities=11% Similarity=0.127 Sum_probs=32.7
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+...++.|-+|++..|.-..... . ++|.++|+++|+.+++.-..
T Consensus 82 ~~~~al~aGkhVl~EKP~a~~~~e-~-~~l~~~a~~~g~~~~v~~~~ 126 (336)
T 2p2s_A 82 LALRTLDAGKDFFTAKPPLTTLEQ-L-DAVQRRVAETGRKFAVYFNE 126 (336)
T ss_dssp HHHHHHHTTCEEEECSSCCSCHHH-H-HHHHHHHHHHCCCEEECCTT
T ss_pred HHHHHHHCCCcEEEeCCCCCCHHH-H-HHHHHHHHHcCCEEEEeecc
Confidence 344557789999999876443222 1 78999999999999976554
No 278
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=25.77 E-value=1.5e+02 Score=26.43 Aligned_cols=44 Identities=18% Similarity=0.229 Sum_probs=32.4
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCC
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a 130 (339)
.+...++.|-+|++..|.-...... ++|.++|+++|+.+++.-.
T Consensus 83 ~~~~al~aGk~Vl~EKPla~~~~e~--~~l~~~a~~~g~~~~v~~~ 126 (364)
T 3e82_A 83 LARLALNAGKHVVVDKPFTLDMQEA--RELIALAEEKQRLLSVFHN 126 (364)
T ss_dssp HHHHHHHTTCEEEECSCSCSSHHHH--HHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHCCCcEEEeCCCcCCHHHH--HHHHHHHHHhCCeEEEEee
Confidence 3445678899999998864433222 7899999999999998543
No 279
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=25.64 E-value=1.4e+02 Score=26.13 Aligned_cols=45 Identities=13% Similarity=0.233 Sum_probs=32.8
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+...++.|-+|++..|.-...... ++|.++|+++|+.+++.-.+
T Consensus 83 ~~~~al~~gk~vl~EKP~~~~~~e~--~~l~~~a~~~g~~~~v~~~~ 127 (330)
T 3e9m_A 83 AAKLALSQGKPVLLEKPFTLNAAEA--EELFAIAQEQGVFLMEAQKS 127 (330)
T ss_dssp HHHHHHHTTCCEEECSSCCSSHHHH--HHHHHHHHHTTCCEEECCSG
T ss_pred HHHHHHHCCCeEEEeCCCCCCHHHH--HHHHHHHHHcCCeEEEEEhh
Confidence 3445677888999998864432222 78899999999999887654
No 280
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=24.52 E-value=1.3e+02 Score=26.75 Aligned_cols=45 Identities=16% Similarity=0.225 Sum_probs=33.2
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+...++.|-+|++..|.-...... ++|.++|+++|+.+++.-.+
T Consensus 81 ~~~~al~aGkhVl~EKPla~~~~e~--~~l~~~a~~~g~~~~v~~~~ 125 (358)
T 3gdo_A 81 HTMACIQAGKHVVMEKPMTATAEEG--ETLKRAADEKGVLLSVYHNR 125 (358)
T ss_dssp HHHHHHHTTCEEEEESSCCSSHHHH--HHHHHHHHHHTCCEEEECGG
T ss_pred HHHHHHHcCCeEEEecCCcCCHHHH--HHHHHHHHHcCCeEEEeeec
Confidence 3455678899999999864433222 78999999999999986543
No 281
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=24.52 E-value=1.3e+02 Score=26.15 Aligned_cols=45 Identities=13% Similarity=0.206 Sum_probs=32.3
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+...++.|-+|++..|.-...... ++|.++|+++|+.+++--..
T Consensus 81 ~~~~al~aGkhVl~EKPla~~~~ea--~~l~~~a~~~g~~~~~~~~~ 125 (294)
T 1lc0_A 81 YIRQFLQAGKHVLVEYPMTLSFAAA--QELWELAAQKGRVLHEEHVE 125 (294)
T ss_dssp HHHHHHHTTCEEEEESCSCSCHHHH--HHHHHHHHHTTCCEEEECGG
T ss_pred HHHHHHHCCCcEEEeCCCCCCHHHH--HHHHHHHHHhCCEEEEEEhH
Confidence 3445678899999998764332211 78999999999998875443
No 282
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=23.99 E-value=1.9e+02 Score=25.21 Aligned_cols=45 Identities=16% Similarity=0.214 Sum_probs=32.4
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+...++.|-+|++..|.-...... ++|.++|+++|+.+++.-.+
T Consensus 79 ~~~~al~~gk~v~~EKP~~~~~~~~--~~l~~~a~~~g~~~~v~~~~ 123 (331)
T 4hkt_A 79 LIERFARAGKAIFCEKPIDLDAERV--RACLKVVSDTKAKLMVGFNR 123 (331)
T ss_dssp HHHHHHHTTCEEEECSCSCSSHHHH--HHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHcCCcEEEecCCCCCHHHH--HHHHHHHHHcCCeEEEcccc
Confidence 3445567889999998854332211 78899999999999987554
No 283
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=23.71 E-value=1.8e+02 Score=25.72 Aligned_cols=45 Identities=9% Similarity=0.248 Sum_probs=32.9
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+...++.|-+|++..|.-..... . ++|.++|+++|+.+++.-.+
T Consensus 98 ~~~~al~aGkhVl~EKPla~~~~e-a-~~l~~~a~~~g~~~~v~~~~ 142 (340)
T 1zh8_A 98 FIEKALRKGVHVICEKPISTDVET-G-KKVVELSEKSEKTVYIAENF 142 (340)
T ss_dssp HHHHHHHTTCEEEEESSSSSSHHH-H-HHHHHHHHHCSSCEEEECGG
T ss_pred HHHHHHHCCCcEEEeCCCCCCHHH-H-HHHHHHHHHcCCeEEEEecc
Confidence 344567788899999886443222 1 78999999999999987554
No 284
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=23.28 E-value=2e+02 Score=25.00 Aligned_cols=58 Identities=9% Similarity=0.099 Sum_probs=36.9
Q ss_pred eEEEcCcHHHHH-HHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 72 RALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 72 ~~l~~~sG~~A~-~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
++++.++-.... ..+...++.|-+|++..|.-... .-. ++|.++|+++|+.+++--.+
T Consensus 64 D~V~i~tp~~~h~~~~~~al~~gk~V~~EKP~~~~~-~~~-~~l~~~a~~~g~~~~~~~~~ 122 (325)
T 2ho3_A 64 DLVYIASPNSLHFAQAKAALSAGKHVILEKPAVSQP-QEW-FDLIQTAEKNNCFIFEAARN 122 (325)
T ss_dssp SEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSH-HHH-HHHHHHHHHTTCCEEEECTT
T ss_pred CEEEEeCChHHHHHHHHHHHHcCCcEEEecCCcCCH-HHH-HHHHHHHHHcCCEEEEEEhh
Confidence 444444332222 23445678899999998753322 112 78999999999998876544
No 285
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=23.22 E-value=2e+02 Score=25.49 Aligned_cols=43 Identities=14% Similarity=0.203 Sum_probs=31.4
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeC
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~ 129 (339)
.+...++.|-+|++..|.-..... . ++|.++|+++|+.+++--
T Consensus 87 ~~~~al~aGk~V~~EKP~a~~~~e-~-~~l~~~a~~~g~~~~~~~ 129 (362)
T 1ydw_A 87 WAIKAAEKGKHILLEKPVAMNVTE-F-DKIVDACEANGVQIMDGT 129 (362)
T ss_dssp HHHHHHTTTCEEEECSSCSSSHHH-H-HHHHHHHHTTTCCEEECC
T ss_pred HHHHHHHCCCeEEEecCCcCCHHH-H-HHHHHHHHHcCCEEEEEE
Confidence 344567889999998875433222 2 789999999999998753
No 286
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=22.78 E-value=1.8e+02 Score=25.54 Aligned_cols=46 Identities=9% Similarity=0.055 Sum_probs=33.5
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCcC
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSIM 132 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~a 132 (339)
.+...++.|-+|++..|.-...... ++|.++|+++|+.+++.-.+.
T Consensus 80 ~~~~al~~gk~v~~EKP~~~~~~e~--~~l~~~a~~~g~~~~v~~~~R 125 (344)
T 3ezy_A 80 LVIACAKAKKHVFCEKPLSLNLADV--DRMIEETKKADVILFTGFNRR 125 (344)
T ss_dssp HHHHHHHTTCEEEEESCSCSCHHHH--HHHHHHHHHHTCCEEEECGGG
T ss_pred HHHHHHhcCCeEEEECCCCCCHHHH--HHHHHHHHHhCCcEEEeeccc
Confidence 3445677889999998854432221 788999999999999886553
No 287
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=22.04 E-value=3.2e+02 Score=23.75 Aligned_cols=26 Identities=15% Similarity=0.360 Sum_probs=16.3
Q ss_pred HHHHHHHhHhCCCeEEEcCcHHHHHH
Q 019543 59 ALESLLAKLDKADRALCFTSGMAALA 84 (339)
Q Consensus 59 ~le~~la~~~g~~~~l~~~sG~~A~~ 84 (339)
.+++....+..+...+++..|++...
T Consensus 60 ~i~~i~~~l~~a~rI~~~G~G~S~~l 85 (306)
T 1nri_A 60 AVEQIVQAFQQGGRLIYIGAGTSGRL 85 (306)
T ss_dssp HHHHHHHHHHTTCCEEEEESHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEeccHhHHH
Confidence 33444444556678889998876543
No 288
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=21.60 E-value=2e+02 Score=25.05 Aligned_cols=44 Identities=14% Similarity=0.169 Sum_probs=30.9
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCC
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNS 130 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a 130 (339)
.+...++.|-+|++..|.-... .-. ++|.++|+++|+.+++.-.
T Consensus 78 ~~~~al~~Gk~v~~ekP~~~~~-~~~-~~l~~~a~~~g~~~~~~~~ 121 (332)
T 2glx_A 78 QTLAAIRAGKHVLCEKPLAMTL-EDA-REMVVAAREAGVVLGTNHH 121 (332)
T ss_dssp HHHHHHHTTCEEEECSSSCSSH-HHH-HHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHCCCeEEEeCCCcCCH-HHH-HHHHHHHHHcCCEEEEeeh
Confidence 3445577899999987753322 112 7899999999999887543
No 289
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=21.37 E-value=1.4e+02 Score=26.39 Aligned_cols=70 Identities=9% Similarity=0.189 Sum_probs=42.2
Q ss_pred HHHHHHHHhHhCCCeEEEcCcHHHH-HHHHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 58 DALESLLAKLDKADRALCFTSGMAA-LAAVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 58 ~~le~~la~~~g~~~~l~~~sG~~A-~~~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
..+++.+++ ... ++++.++-... ...+...++.|-+|++..|.-...... ++|.++|+++|+.+++.-.+
T Consensus 55 ~~~~~ll~~-~~~-D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~--~~l~~~a~~~g~~~~v~~~~ 125 (345)
T 3f4l_A 55 SDLDEVLND-PDV-KLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQA--KELFALAKSKGLTVTPYQNR 125 (345)
T ss_dssp SCTHHHHTC-TTE-EEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHH--HHHHHHHHHHTCCEEECCGG
T ss_pred CCHHHHhcC-CCC-CEEEEcCChHHHHHHHHHHHHcCCcEEEeCCCCCCHHHH--HHHHHHHHHcCCeEEEEech
Confidence 344555443 112 45544333222 223455678899999998864433222 78899999999999875443
No 290
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=21.32 E-value=1.6e+02 Score=26.05 Aligned_cols=45 Identities=16% Similarity=0.269 Sum_probs=32.9
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+...++.|-+|++..|.-...... ++|.++|+++|+.+++.-.+
T Consensus 82 ~~~~al~~gk~vl~EKP~~~~~~~~--~~l~~~a~~~~~~~~v~~~~ 126 (354)
T 3db2_A 82 VIEQCARSGKHIYVEKPISVSLDHA--QRIDQVIKETGVKFLCGHSS 126 (354)
T ss_dssp HHHHHHHTTCEEEEESSSCSSHHHH--HHHHHHHHHHCCCEEEECGG
T ss_pred HHHHHHHcCCEEEEccCCCCCHHHH--HHHHHHHHHcCCeEEEeech
Confidence 3445677899999998854432211 78899999999999987654
No 291
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=20.87 E-value=2.5e+02 Score=24.78 Aligned_cols=45 Identities=9% Similarity=0.004 Sum_probs=32.1
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEEEEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALLLVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~livD~a~ 131 (339)
.+...++.|-+|++..|.-...... ++|.++|+++|+.+++.-.+
T Consensus 91 ~~~~al~~gk~v~~EKP~a~~~~~~--~~l~~~a~~~g~~~~v~~~~ 135 (354)
T 3q2i_A 91 QSIECSEAGFHVMTEKPMATRWEDG--LEMVKAADKAKKHLFVVKQN 135 (354)
T ss_dssp HHHHHHHTTCEEEECSSSCSSHHHH--HHHHHHHHHHTCCEEECCGG
T ss_pred HHHHHHHCCCCEEEeCCCcCCHHHH--HHHHHHHHHhCCeEEEEEcc
Confidence 3444567889999998854332211 78899999999999876543
No 292
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=20.86 E-value=1.8e+02 Score=25.64 Aligned_cols=45 Identities=16% Similarity=0.081 Sum_probs=32.0
Q ss_pred HHHHhcCCCCEEEEcCCCccchHHHHHHHHHHHHHHcCCEE-EEeCCc
Q 019543 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRKIAEMAHAHGALL-LVDNSI 131 (339)
Q Consensus 85 ~il~ll~~GD~Vi~~~~~y~~~~~~~~~~I~~la~~~g~~l-ivD~a~ 131 (339)
.+...++.|-+|++..|.-...... ++|.++|+++|..+ ++.-.+
T Consensus 82 ~~~~al~~Gk~vl~EKP~a~~~~e~--~~l~~~a~~~g~~~~~v~~~~ 127 (344)
T 3mz0_A 82 SVLKAIKAQKYVFCEKPLATTAEGC--MRIVEEEIKVGKRLVQVGFMR 127 (344)
T ss_dssp HHHHHHHTTCEEEECSCSCSSHHHH--HHHHHHHHHHSSCCEEECCGG
T ss_pred HHHHHHHCCCcEEEcCCCCCCHHHH--HHHHHHHHHHCCEEEEEeccc
Confidence 4455678899999998864432221 78899999999977 665443
No 293
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=20.42 E-value=60 Score=27.92 Aligned_cols=18 Identities=11% Similarity=0.126 Sum_probs=16.5
Q ss_pred HHHHHHHHHcCCEEEEeC
Q 019543 112 RKIAEMAHAHGALLLVDN 129 (339)
Q Consensus 112 ~~I~~la~~~g~~livD~ 129 (339)
+++.++|+++|+.||+|-
T Consensus 93 d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 93 KDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEe
Confidence 788999999999999885
Done!