BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019547
(339 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54PW9|EI24_DICDI Protein EI24 homolog OS=Dictyostelium discoideum GN=DDB_G0284253
PE=3 SV=1
Length = 307
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 142/300 (47%), Gaps = 46/300 (15%)
Query: 27 GLREACCLHRVVILCRRSTKLLIRTGQCFLLNGFIFLGSMFVLKSAVIPFLLWILPDQCS 86
G+ ++ L +I +S L C LNG IFLG+ + +L W+ P
Sbjct: 29 GVADSMKLKGAIIRTIKSEVLRKNFIHCIFLNGIIFLGTYLI-------YLYWVSP---- 77
Query: 87 QIRSQELCLDSGILKFYSFLRLALIQLLYIFWFYPLYVFSIVLSTLWYNDIAKYGFAAMG 146
+ + +L + L + + W YP+Y+FSI+ ++ WY +IAK F G
Sbjct: 78 --------MLNYLLNHFPTLSNMFTIIYFSLWVYPVYIFSIIANSKWYTEIAKESFVISG 129
Query: 147 RSGQSSKELSRQDETLQNTEQKGRLPGLGGVMIVIGEQVYSMLLLSFFFVEVNAIGFLPY 206
R+ T N+ G++ +++Y LL V I F+PY
Sbjct: 130 RT------------TFANSTN--------GILSSFVDEIYRNLLFGVILVMSAIIAFIPY 169
Query: 207 IGKGFNFLLLSWMYAYYCFEYKWNF-SEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFS 265
NF++++W+Y+++CF+YKW + L +R+ +FE++WA+ G+G FFF
Sbjct: 170 -TNFINFVIITWLYSFWCFDYKWILRGKWNLLQRIQYFETHWAYMFGYGLIFTTCSFFFP 228
Query: 266 PLVAYGVMAILYPLFVLTATASGAEEVISSKRRSWKGAGFGRLPIFYVADALSMKVLSFF 325
L+ + +ILYPLF++ + ++ ++++ G ++PIFYV + + +L +
Sbjct: 229 MLIGNAIFSILYPLFIILSISAKPTKMVNQ-----DGILPKQIPIFYVPEIIVNVILKLY 283
>sp|O14681|EI24_HUMAN Etoposide-induced protein 2.4 homolog OS=Homo sapiens GN=EI24 PE=1
SV=4
Length = 340
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 35/246 (14%)
Query: 46 KLLIRTGQCFLLNGFIFLGSMFVLKSAVIPFLLWILPDQCSQIRSQELCLDSGIL-KFYS 104
+++ R QC NG +F S+ + IP L Q + + D + +S
Sbjct: 66 RIVSRIFQCCAWNGGVFWFSLLLFYRVFIPVL---------QSVTARIIGDPSLHGDVWS 116
Query: 105 FLRLALIQLLYIFWFYPLYVFSIVLSTLWYNDIAKYGFAAMGRSGQSSKELSRQDETLQN 164
+L L + W PL+V S V++ +W+ DIA F GR +S+
Sbjct: 117 WLEFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSK------- 169
Query: 165 TEQKGRLPGLGGVMIVIGEQVYSMLLLSFFFVEVNAIGFLPY--IGKGFNFLLLSWMYAY 222
+I + ++++LL + F ++ + P +G+ + L +S +Y+
Sbjct: 170 ---------------IIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSL 214
Query: 223 YCFEYKWNFSEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYGVM-AILYPLFV 281
YCFEY+W + + +RL E NW ++ GFG P S + G + +IL+PLF+
Sbjct: 215 YCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFI 274
Query: 282 LTATAS 287
++A +
Sbjct: 275 ISANEA 280
>sp|Q61070|EI24_MOUSE Etoposide-induced protein 2.4 OS=Mus musculus GN=Ei24 PE=1 SV=3
Length = 340
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 35/246 (14%)
Query: 46 KLLIRTGQCFLLNGFIFLGSMFVLKSAVIPFLLWILPDQCSQIRSQELCLDSGIL-KFYS 104
+++ R QC NG +F S+ + IP L Q + + D + +S
Sbjct: 66 RIVSRIFQCCAWNGGVFWFSLLLFYRVFIPVL---------QSVTARIIGDPSLHGDVWS 116
Query: 105 FLRLALIQLLYIFWFYPLYVFSIVLSTLWYNDIAKYGFAAMGRSGQSSKELSRQDETLQN 164
+L L + W PL+V S V++ +W+ DIA F GR +S+
Sbjct: 117 WLEFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSK------- 169
Query: 165 TEQKGRLPGLGGVMIVIGEQVYSMLLLSFFFVEVNAIGFLPY--IGKGFNFLLLSWMYAY 222
+I + ++++LL + F ++ + P +G+ + L +S +Y+
Sbjct: 170 ---------------IIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSL 214
Query: 223 YCFEYKWNFSEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYGVM-AILYPLFV 281
YCFEY+W + + +RL E NW ++ GFG P S + G + +IL+PLF+
Sbjct: 215 YCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFI 274
Query: 282 LTATAS 287
++A +
Sbjct: 275 ISANEA 280
>sp|Q4KM77|EI24_RAT Etoposide-induced protein 2.4 homolog OS=Rattus norvegicus GN=Ei24
PE=2 SV=1
Length = 340
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 33/245 (13%)
Query: 46 KLLIRTGQCFLLNGFIFLGSMFVLKSAVIPFLLWILPDQCSQIRSQELCLDSGILKFYSF 105
+++ R QC NG +F S+ + IP L + ++ + S +S+
Sbjct: 66 RIVSRIFQCCAWNGGVFWFSLLLFYRVFIPVL--------QSVTARVIGDPSLHGDVWSW 117
Query: 106 LRLALIQLLYIFWFYPLYVFSIVLSTLWYNDIAKYGFAAMGRSGQSSKELSRQDETLQNT 165
L L + W PL+V S V++ +W+ DIA F GR +S+
Sbjct: 118 LEFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSK-------- 169
Query: 166 EQKGRLPGLGGVMIVIGEQVYSMLLLSFFFVEVNAIGFLPY--IGKGFNFLLLSWMYAYY 223
+I + ++++LL + F ++ + P +G+ + L +S +Y+ Y
Sbjct: 170 --------------IIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSLY 215
Query: 224 CFEYKWNFSEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYGVM-AILYPLFVL 282
CFEY+W + + +RL E NW ++ GFG P S + G + +IL+PLF++
Sbjct: 216 CFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFII 275
Query: 283 TATAS 287
+A +
Sbjct: 276 SANEA 280
>sp|Q08DE5|EI24_BOVIN Etoposide-induced protein 2.4 homolog OS=Bos taurus GN=EI24 PE=2
SV=1
Length = 340
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 29/243 (11%)
Query: 46 KLLIRTGQCFLLNGFIFLGSMFVLKSAVIPFLLWILPDQCSQIRSQELCLDSGILKFYSF 105
+++ R QC NG +F S+ + IP L + +Q + S +S+
Sbjct: 66 RIVSRIFQCCAWNGGVFWFSLLLFYRVFIPVL--------QSVTAQIIGDPSLHGDVWSW 117
Query: 106 LRLALIQLLYIFWFYPLYVFSIVLSTLWYNDIAKYGFAAMGRSGQSSKELSRQDETLQNT 165
L L + W PL+V S V++ +W+ DIA F GR +S+ +
Sbjct: 118 LEFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFN 177
Query: 166 EQKGRLPGLGGVMIVIGEQVYSMLLLSFFFVEVNAIGFLPYIGKGFNFLLLSWMYAYYCF 225
L L G+ + S F + + +G+ + L +S +Y+ YCF
Sbjct: 178 LLLQALFLLQGMFV------------SLFPIHL--------VGQLVSLLHMSLLYSLYCF 217
Query: 226 EYKWNFSEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYGVM-AILYPLFVLTA 284
EY+W + + +RL E NW ++ GFG P S + G + +IL+PLF+++A
Sbjct: 218 EYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIVSGCLFSILFPLFIISA 277
Query: 285 TAS 287
+
Sbjct: 278 NEA 280
>sp|Q20123|EI24_CAEEL Ectopic P granules protein 4 OS=Caenorhabditis elegans GN=epg-4
PE=2 SV=1
Length = 315
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 121 PLYVFSIVLSTLWYNDIAKYGFAAMGRSGQSSKELSRQDETLQNTEQKGRLPGLGGVMIV 180
P++ S ++ LW++DI+ A+ S L G +I
Sbjct: 120 PIFFASRIIQALWFSDISGACMRALKLPPPPVVPFSSM---------------LAGTLIS 164
Query: 181 IGEQVYSMLLLSFFFVEVNAIGFLPY--IGKGFNFLLLSWMYAYYCFEYKWNFSEVGLDK 238
Q+ FF ++ +LP I +L ++ + + YCF+Y ++ + +
Sbjct: 165 ALHQI-------FFLIQGMLSQYLPIPLITPVIVYLHMALLNSMYCFDYFFDGYNLSFLR 217
Query: 239 RLDFFESNWAFFAGFGSPCVLAYFFFSPLVAYGVM-AILYPLFVLTATASG 288
R D FES+W +F GFG+P LA S + V+ A+L+P F++T+ +
Sbjct: 218 RKDIFESHWPYFLGFGTPLALACSISSNMFVNSVIFALLFPFFIITSYPAN 268
>sp|Q5UQ30|YL211_MIMIV Uncharacterized protein L211 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L211 PE=4 SV=1
Length = 262
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 213 FLLLSWMYAYYCFEYKWNFSEVGLDKRLDFFESNWAFFAGFGSPCVLAYFFFS-PLVAY 270
F++L+ +++ CF W++ + + R+ E WA++ G+G+ L Y + + PL+ Y
Sbjct: 152 FIILTLYHSFCCFNNLWHYKNIDIHHRISLHEKLWAYYLGYGTIASLMYIYSNHPLMIY 210
>sp|C5E0N8|AEP2_ZYGRC ATPase expression protein 2, mitochondrial OS=Zygosaccharomyces
rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC
568 / NRRL Y-229) GN=AEP2 PE=3 SV=1
Length = 550
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 270 YGVMAILYPLFVLTATASGAEEVIS 294
YG+M LYP+FV T +GA EVI+
Sbjct: 424 YGIMKELYPIFVRTKNKNGALEVIT 448
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.143 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,767,967
Number of Sequences: 539616
Number of extensions: 4526204
Number of successful extensions: 11518
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 11495
Number of HSP's gapped (non-prelim): 12
length of query: 339
length of database: 191,569,459
effective HSP length: 118
effective length of query: 221
effective length of database: 127,894,771
effective search space: 28264744391
effective search space used: 28264744391
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)