Query 019547
Match_columns 339
No_of_seqs 97 out of 108
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 03:28:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019547.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019547hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kq8a_ a.4.5.14 (A:) HFH-1 (H 9.8 65 0.0047 22.5 1.9 22 231-252 14-35 (75)
2 d1jb0k_ f.30.1.1 (K:) Photosys 8.6 53 0.0039 22.2 1.0 24 248-271 30-53 (58)
3 d3bpya1 a.4.5.14 (A:93-177) Af 8.6 80 0.0058 22.5 2.1 21 231-251 23-43 (85)
4 d2a07f1 a.4.5.14 (F:503-584) F 7.8 90 0.0066 22.0 2.1 22 231-252 20-41 (82)
5 d2hd9a1 b.122.1.8 (A:1-145) Hy 7.1 38 0.0028 26.3 -0.5 21 235-255 106-129 (145)
6 d2pstx1 d.100.2.1 (X:8-68) Unc 6.8 78 0.0057 21.5 1.1 14 235-248 36-49 (61)
7 d2hdca_ a.4.5.14 (A:) Genesis 6.5 1.1E+02 0.0077 22.2 1.9 22 231-252 20-41 (97)
8 d1d5va_ a.4.5.14 (A:) Adipocyt 6.0 1.2E+02 0.0085 21.9 1.9 22 231-252 22-43 (94)
9 d2c6ya1 a.4.5.14 (A:1-98) Inte 4.7 1.2E+02 0.0088 21.9 1.2 22 231-252 21-42 (98)
10 d2axti1 f.23.37.1 (I:1-35) Pho 3.8 4.4E+02 0.032 15.6 3.5 20 51-70 3-22 (35)
No 1
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=9.76 E-value=65 Score=22.47 Aligned_cols=22 Identities=18% Similarity=0.436 Sum_probs=19.2
Q ss_pred cCCcchhHHHHhHhhhhhhhhc
Q 019547 231 FSEVGLDKRLDFFESNWAFFAG 252 (339)
Q Consensus 231 ~~g~~L~~Rl~~fE~~WaYF~G 252 (339)
.+..+|.+=-+++|+++|||-+
T Consensus 14 ~~~ltL~eIy~~i~~~fpy~r~ 35 (75)
T d1kq8a_ 14 GGRLTLAEINEYLMGKFPFFRG 35 (75)
T ss_dssp SSCBCHHHHHHHHHHHCTTGGG
T ss_pred CCCccHHHHHHHHHHhCccccc
Confidence 3578999999999999999964
No 2
>d1jb0k_ f.30.1.1 (K:) Photosystem I reaction center subunit X, PsaK {Synechococcus elongatus [TaxId: 32046]}
Probab=8.57 E-value=53 Score=22.20 Aligned_cols=24 Identities=50% Similarity=0.754 Sum_probs=13.6
Q ss_pred hhhhcchhhhHHHhhhcchhhHHH
Q 019547 248 AFFAGFGSPCVLAYFFFSPLVAYG 271 (339)
Q Consensus 248 aYF~GFG~p~tl~t~~~s~lv~~~ 271 (339)
.+|-|||.|--++|.-+-.+++.+
T Consensus 30 ~~fgg~g~~~lLat~s~GHilG~G 53 (58)
T d1jb0k_ 30 ALFEGFGLPELLATTSFGHLLAAG 53 (58)
T ss_dssp ------CCTTGGGHHHHHHHHHHH
T ss_pred hhccCCCHHHHHHHhhHHHHHhhh
Confidence 588999999888887766666644
No 3
>d3bpya1 a.4.5.14 (A:93-177) Afx (Foxo4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.56 E-value=80 Score=22.49 Aligned_cols=21 Identities=10% Similarity=0.252 Sum_probs=18.5
Q ss_pred cCCcchhHHHHhHhhhhhhhh
Q 019547 231 FSEVGLDKRLDFFESNWAFFA 251 (339)
Q Consensus 231 ~~g~~L~~Rl~~fE~~WaYF~ 251 (339)
.++.+|.+=-++||+++|||=
T Consensus 23 ~~~ltL~eIY~~i~~~fPyyr 43 (85)
T d3bpya1 23 EKRLTLAQIYEWMVRTVPYFK 43 (85)
T ss_dssp TSCBCHHHHHHHHHHHCGGGT
T ss_pred CCCccHHHHHHHHHHhChhhh
Confidence 457899999999999999995
No 4
>d2a07f1 a.4.5.14 (F:503-584) Forkhead box protein P2, FOXP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.84 E-value=90 Score=22.02 Aligned_cols=22 Identities=18% Similarity=0.463 Sum_probs=19.3
Q ss_pred cCCcchhHHHHhHhhhhhhhhc
Q 019547 231 FSEVGLDKRLDFFESNWAFFAG 252 (339)
Q Consensus 231 ~~g~~L~~Rl~~fE~~WaYF~G 252 (339)
.++.+|.+=-+++|+++|||-+
T Consensus 20 ~~~LtL~eIy~~i~~~fpyyr~ 41 (82)
T d2a07f1 20 DRQLTLNEIYSWFTRTFAYFRR 41 (82)
T ss_dssp TSCBCHHHHHHHHHHHHHHHCC
T ss_pred CCCccHHHHHHHHHHhCccccc
Confidence 4578999999999999999974
No 5
>d2hd9a1 b.122.1.8 (A:1-145) Hypothetical protein PH1033 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=7.08 E-value=38 Score=26.35 Aligned_cols=21 Identities=29% Similarity=0.548 Sum_probs=15.7
Q ss_pred chhHHHHhHhh--hh-hhhhcchh
Q 019547 235 GLDKRLDFFES--NW-AFFAGFGS 255 (339)
Q Consensus 235 ~L~~Rl~~fE~--~W-aYF~GFG~ 255 (339)
+|-.+|+|++. +| .|++|+|+
T Consensus 106 ~l~~~L~fi~~k~~W~~y~~r~g~ 129 (145)
T d2hd9a1 106 PLINDLKFIKNKKRWSMHFFGKAM 129 (145)
T ss_dssp GGGGGCTTCCCSTTGGGGTTTCSE
T ss_pred HHHhHHHhhcCchhhhHHHhcCCc
Confidence 35567777775 89 78899886
No 6
>d2pstx1 d.100.2.1 (X:8-68) Uncharacterized protein PA2412 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=6.76 E-value=78 Score=21.45 Aligned_cols=14 Identities=21% Similarity=0.442 Sum_probs=11.1
Q ss_pred chhHHHHhHhhhhh
Q 019547 235 GLDKRLDFFESNWA 248 (339)
Q Consensus 235 ~L~~Rl~~fE~~Wa 248 (339)
+-+..++|+|++|.
T Consensus 36 ~r~~Cl~yIe~~Wt 49 (61)
T d2pstx1 36 LKKDCLAYIEEVWT 49 (61)
T ss_dssp CHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHhc
Confidence 34678999999995
No 7
>d2hdca_ a.4.5.14 (A:) Genesis {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=6.50 E-value=1.1e+02 Score=22.25 Aligned_cols=22 Identities=9% Similarity=0.360 Sum_probs=19.0
Q ss_pred cCCcchhHHHHhHhhhhhhhhc
Q 019547 231 FSEVGLDKRLDFFESNWAFFAG 252 (339)
Q Consensus 231 ~~g~~L~~Rl~~fE~~WaYF~G 252 (339)
.+..+|.+=-+++|+++|||-+
T Consensus 20 ~~~ltL~eIY~~i~~~fpyfr~ 41 (97)
T d2hdca_ 20 QKKLTLSGICEFISNRFPYYRE 41 (97)
T ss_dssp TTCBCHHHHHHHHHHHCHHHHH
T ss_pred CcCccHHHHHHHHHHhCccccC
Confidence 4678999988999999999964
No 8
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.03 E-value=1.2e+02 Score=21.91 Aligned_cols=22 Identities=14% Similarity=0.371 Sum_probs=19.3
Q ss_pred cCCcchhHHHHhHhhhhhhhhc
Q 019547 231 FSEVGLDKRLDFFESNWAFFAG 252 (339)
Q Consensus 231 ~~g~~L~~Rl~~fE~~WaYF~G 252 (339)
.++.+|.+=-+++|+|+|||-.
T Consensus 22 ~~~ltL~eIY~~i~~~fpyfr~ 43 (94)
T d1d5va_ 22 EKKITLNGIYQFIMDRFPFYRE 43 (94)
T ss_dssp SSSBCHHHHHHHHHHHCTHHHH
T ss_pred CCCccHHHHHHHHHHHCCccCc
Confidence 4678999999999999999964
No 9
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.73 E-value=1.2e+02 Score=21.94 Aligned_cols=22 Identities=9% Similarity=0.279 Sum_probs=18.8
Q ss_pred cCCcchhHHHHhHhhhhhhhhc
Q 019547 231 FSEVGLDKRLDFFESNWAFFAG 252 (339)
Q Consensus 231 ~~g~~L~~Rl~~fE~~WaYF~G 252 (339)
..+.+|.+=-++||+++|||-.
T Consensus 21 ~~~ltL~eIy~~i~~~fpyfr~ 42 (98)
T d2c6ya1 21 DKQLTLNGIYTHITKNYPYYRT 42 (98)
T ss_dssp TSCEEHHHHHHHHHHHCTTSCT
T ss_pred CCCccHHHHHHHHHHhCccccc
Confidence 4678899989999999999953
No 10
>d2axti1 f.23.37.1 (I:1-35) Photosystem II reaction center protein I, PsbI {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=3.83 E-value=4.4e+02 Score=15.55 Aligned_cols=20 Identities=20% Similarity=0.155 Sum_probs=13.2
Q ss_pred hhhHHHHHHHHHHHHHHHHH
Q 019547 51 TGQCFLLNGFIFLGSMFVLK 70 (339)
Q Consensus 51 ~~qc~lLNg~iflgSil~f~ 70 (339)
++|.++.-.++|..|+++|-
T Consensus 3 tLKi~Vy~vV~fFv~lFiFG 22 (35)
T d2axti1 3 TLKITVYIVVTFFVLLFVFG 22 (35)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEehhhHHHHHHHHHHHh
Confidence 35566666677777777665
Done!