BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019549
(339 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 79 WWDRVDEFLLLGAVPFP--TDVPCLKELGVGGVITLNEPYET--LVPTSL-YHAHCIDHL 133
W+ R+D +LLGA+P T L E V GVIT+NE YET L TS + ++ L
Sbjct: 1 WYHRIDHTVLLGALPLKNMTRRLVLDE-NVRGVITMNEEYETRFLCNTSKEWKKAGVEQL 59
Query: 134 VIPTRDYCFAPSLGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVICYLM-----TP 188
+ T D P+L ++ + V F + Q YVHCKAGR RS T+V YL+ +P
Sbjct: 60 RLSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSP 119
Query: 189 DAAYDYVRSIRPRVLLASAQWQAVLEYYN 217
+ A + + IR + + +Q + + E++
Sbjct: 120 EEAIEAIAKIRSHISIRPSQLEVLKEFHK 148
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 79 WWDRVDEFLLLGAVPFP--TDVPCLKELGVGGVITLNEPYET--LVPTSL-YHAHCIDHL 133
W+ R+D +LLGA+P T L E V GVIT+NE YET L TS + ++ L
Sbjct: 2 WYHRIDHTVLLGALPLKNMTRRLVLDE-NVRGVITMNEEYETRFLCNTSKEWKKAGVEQL 60
Query: 134 VIPTRDYCFAPSLGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVICYLM-----TP 188
+ T D P+L ++ + V F + Q YVH KAGR RS T+V YL+ +P
Sbjct: 61 RLSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHSKAGRSRSATMVAAYLIQVHNWSP 120
Query: 189 DAAYDYVRSIRPRVLLASAQWQAVLEYYN 217
+ A + + IR + + +Q + + E++
Sbjct: 121 EEAIEAIAKIRSHISIRPSQLEVLKEFHK 149
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 16/132 (12%)
Query: 94 FPTDVPCLKELGVGGVITLNE---PYETLVPTSLYHAHCIDHLVIPTRDYCFAPSLGDIC 150
P L +LGV +++L E P+ P H L IP D+C P+ I
Sbjct: 24 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLH-----RLRIP--DFC-PPAPDQID 75
Query: 151 RAVDFICENALSRQTTYVHCKAGRGRSTTVVICYLMTPDA-----AYDYVRSIRPRVLLA 205
R V + E + VHC G GR+ T++ CYL+ A +R +RP +
Sbjct: 76 RFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRLRPGSIET 135
Query: 206 SAQWQAVLEYYN 217
Q +AV ++Y
Sbjct: 136 YEQEKAVFQFYQ 147
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 16/132 (12%)
Query: 94 FPTDVPCLKELGVGGVITLNE---PYETLVPTSLYHAHCIDHLVIPTRDYCFAPSLGDIC 150
P L +LGV +++L E P+ P H L IP D+C P+ I
Sbjct: 25 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLH-----RLRIP--DFC-PPAPDQID 76
Query: 151 RAVDFICENALSRQTTYVHCKAGRGRSTTVVICYLMTPDA-----AYDYVRSIRPRVLLA 205
R V + E + VHC G GR+ T + CYL+ A +R +RP +
Sbjct: 77 RFVQIVDEANARGEAVGVHCALGFGRTGTXLACYLVKERGLAAGDAIAEIRRLRPGSIET 136
Query: 206 SAQWQAVLEYYN 217
Q +AV ++Y
Sbjct: 137 YEQEKAVFQFYQ 148
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 81 DRVDEFLLLGAVPFPTDVPCLKELGVGGVITLNEPYETL---VPTSLYHAHCIDHLVIPT 137
+ V + +G D+P L++LG+ V+ E + + Y I +L I
Sbjct: 30 NEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKA 89
Query: 138 RDYCFAPSLGDICRAVDFICENALSRQT--TYVHCKAGRGRSTTVVICYLM 186
D RA DFI + AL+++ VHC+ G RS T+VI YLM
Sbjct: 90 NDTQEFNLSAYFERAADFI-DQALAQKNGRVLVHCREGYSRSPTLVIAYLM 139
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 81 DRVDEFLLLGAVPFPTDVPCLKELGVGGVITLNEPYETL---VPTSLYHAHCIDHLVIPT 137
+ V + +G D+P L++LG+ V+ E + + Y I +L I
Sbjct: 29 NEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKA 88
Query: 138 RDYCFAPSLGDICRAVDFICENALSRQT--TYVHCKAGRGRSTTVVICYLM 186
D RA DFI + AL+++ VHC+ G RS T+VI YLM
Sbjct: 89 NDTQEFNLSAYFERAADFI-DQALAQKNGRVLVHCREGYSRSPTLVIAYLM 138
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 156 ICENALSRQTTYVHCKAGRGRSTTVVICYL-----MTPDAAYDYVRSIRPRVLLASAQWQ 210
ICENA VHCKAG GR+ T++ CY+ MT +VR RP ++ Q
Sbjct: 264 ICENA--EGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQF 321
Query: 211 AVLEYYNL 218
V++ NL
Sbjct: 322 LVMKQTNL 329
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 11/113 (9%)
Query: 130 IDHLVIPTRDYCFAPSLGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVICYLMTPD 189
+++ +P D AP D I + T VHC AG RS T+ I YLM
Sbjct: 70 FEYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFH 129
Query: 190 -----AAYDYVRSIRPRVLLASAQWQAVLEYYNLRVNMACLYGHVADKVLRAP 237
AY++V++ RP + W+ +++Y L+G K+++ P
Sbjct: 130 NVCLLEAYNWVKARRPVIRPNVGFWRQLIDYERQ------LFGKSTVKMVQTP 176
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 81 DRVDEFLLLGAVPFPTDVPCLKELGVGGVITLNEPYETL---VPTSLYHAHCIDHLVIPT 137
+ V + +G D+P L++LG+ V+ E + + Y I +L I
Sbjct: 30 NEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKA 89
Query: 138 RDYCFAPSLGDICRAVDFICENALSRQT--TYVHCKAGRGRSTTVVICYLM 186
D RA DFI + AL+++ VH + G RS T+VI YLM
Sbjct: 90 NDTQEFNLSAYFERAADFI-DQALAQKNGRVLVHSREGYSRSPTLVIAYLM 139
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 156 ICENALSRQTTYVHCKAGRGRSTTVVICYL-----MTPDAAYDYVRSIRPRVLLASAQWQ 210
ICENA VH KAG GR+ T++ CY+ MT +VR RP ++ Q
Sbjct: 264 ICENA--EGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQF 321
Query: 211 AVLEYYNL 218
V++ NL
Sbjct: 322 LVMKQTNL 329
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Query: 168 VHCKAGRGRSTTVVICYL-----MTPDAAYDYVRSIRP 200
+HC+AG RS T+VI YL MT AY +V+ RP
Sbjct: 88 IHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRP 125
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Query: 168 VHCKAGRGRSTTVVICYL-----MTPDAAYDYVRSIRP 200
+HC+AG RS T+VI YL MT AY +V+ RP
Sbjct: 92 IHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRP 129
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 130 IDHLVIPTRDYCFAPSLGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVICYLMT 187
+ +L IP D ++ FI E L ++ VHC AG RS T+VI Y+MT
Sbjct: 50 VKYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMT 107
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 9/122 (7%)
Query: 86 FLLLGAVPFPTDVPCLKELGVGGVITLNEPYETLVPTSLYHAHCIDHLVIPTRDYCFAPS 145
FL LG T++ L+E G+ ++ + +P +A + IP D+
Sbjct: 10 FLYLGCAKDSTNLDVLEEFGIKYILNVTPN----LPNLFENAGEFKYKQIPISDHWSQNL 65
Query: 146 LGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVICYLM-----TPDAAYDYVRSIRP 200
A+ FI E VH AG RS TV + YLM + + AYD V+ +
Sbjct: 66 SQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKS 125
Query: 201 RV 202
+
Sbjct: 126 NI 127
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 154 DFICENALSRQTTYVHCKAGRGRSTTVVICYLMTPDA-----AYDYVRSIRPRVLLASAQ 208
D I + + T +HC AG RS + + YLM A A+ + +S RP + S
Sbjct: 88 DHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRPIIRPNSGF 147
Query: 209 WQAVLEY 215
W+ ++ Y
Sbjct: 148 WEQLIHY 154
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 25/126 (19%)
Query: 86 FLLLGAVPFPTDVPCLKELGVGGVITLNEPYETLVPTSLYHAHCIDHL-------VIPTR 138
+L LG+ +D+ L+ G+ V+ ++ A C +H IP
Sbjct: 10 YLFLGSCSHSSDLQGLQACGITAVLNVS-------------ASCPNHFEGLFRYKSIPVE 56
Query: 139 DYCFAPSLGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVICYLMTP-----DAAYD 193
D A+ FI S VH +AG RS T+ + YLM D A+D
Sbjct: 57 DNQMVEISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFD 116
Query: 194 YVRSIR 199
+V+ R
Sbjct: 117 FVKQRR 122
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 151 RAVDFICENALSRQ-TTYVHCKAGRGRSTTVVICYLMTP-----DAAYDYVRSIRPRV 202
A++FI E ALS+ VHC AG RS TV + YLM + AYD V+ + +
Sbjct: 70 EAIEFIDE-ALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNI 126
>pdb|2JJD|A Chain A, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|B Chain B, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|C Chain C, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|D Chain D, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|E Chain E, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|F Chain F, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
Length = 599
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 42/121 (34%)
Query: 138 RDYCFAPSLGDICRAVDFICE----------------------------NALSRQTTYVH 169
R +C P L D C+A + + N + VH
Sbjct: 170 RKFCIQPQLPDGCKAPRLVSQLHFTSWPDFGVPFTPIGMLKFLKKVKTLNPVHAGPIVVH 229
Query: 170 CKAGRGRSTTVVI----CYLMTPDAAYDY------VRSIRPRVLLASAQ----WQAVLEY 215
C AG GR+ T ++ +M + D +R+ RP+++ Q +QA+LEY
Sbjct: 230 CSAGVGRTGTFIVIDAMMAMMHAEQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQALLEY 289
Query: 216 Y 216
Y
Sbjct: 290 Y 290
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 53/143 (37%), Gaps = 17/143 (11%)
Query: 82 RVDEFLLLGAVPFPTDVPCLKELGVGGVITLNEPYETLVPTSLYHAHCIDHLVIPTRDYC 141
++ E + LG+ +++ L+ GV ++ + + P ++ I D
Sbjct: 6 QIFEHVFLGSEWNASNLEDLQNRGVRYILNVTREIDNFFPG------VFEYHNIRVYDEE 59
Query: 142 FAPSLGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVICYLMTP-----DAAYDYVR 196
L FI + VH K G RS + VI Y M D AYDYV+
Sbjct: 60 ATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVK 119
Query: 197 SIR------PRVLLASAQWQAVL 213
R P + ++Q +L
Sbjct: 120 ERRTVTKPNPSFMRQLEEYQGIL 142
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 123 SLYHAHCIDHLVIPTRDYCFAPSLGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVI 182
S+ + + L IP D PS + ++ ++ VHC G GR+ T++
Sbjct: 53 SILKKNGLQPLHIPIPD-GGVPSDSQFLTIMKWLLSE---KEGNLVHCVGGIGRTGTILA 108
Query: 183 CYL-----MTPDAAYDYVRSIRPRVLLASAQWQAVLEYYNLRVN 221
YL + ++A D VR +RP + Q E + LRV
Sbjct: 109 SYLILTEGLEVESAIDEVRLVRPGAVQTYEQ-----EMFLLRVE 147
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 19/95 (20%)
Query: 99 PCLKEL-GVGGVITLNEPYETL---VPTSLYHAHCIDHLVIPTRDYCFA---PSLGDICR 151
P +KEL VI + E L VP YH + +H D A PSL I
Sbjct: 58 PTVKELLPFDVVINVAEEANDLRMQVPAVEYHHYRWEH------DSQIALDLPSLTSIIH 111
Query: 152 AVDFICENALSRQTTYVHCKAGRGRSTTVVICYLM 186
A R+ +HC+ G RS T++I Y+M
Sbjct: 112 AA------TTKREKILIHCQCGLSRSATLIIAYIM 140
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%)
Query: 130 IDHLVIPTRDYCFAPSLGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVICYLMT 187
I +L IP D P ++FI L+ VH AG RSTT+V Y+MT
Sbjct: 51 ITYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMT 108
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 151 RAVDFICENALSRQ-TTYVHCKAGRGRSTTVVICYLMTP-----DAAYDYVRSIRPRV 202
A++FI E ALS+ VH AG RS TV + YLM + AYD V+ + +
Sbjct: 73 EAIEFIDE-ALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNI 129
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 168 VHCKAGRGRSTTVVICYLM-----TPDAAYDYVRSIRP 200
V+CK GR RS V YLM + D A+ V+S RP
Sbjct: 94 VYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARP 131
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 128 HCIDHLVIPTRDYC--FAPSLGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVICYL 185
H ++ +PT D F P+ I RA+ + VHC GR RS T+V+ YL
Sbjct: 108 HGVEADDLPTFDLSVFFYPAAAFIDRAL------SDDHSKILVHCVMGRSRSATLVLAYL 161
Query: 186 M 186
M
Sbjct: 162 M 162
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 129 CIDHLV---IPTRDYCFAPSLGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVICYL 185
C+ HL IP D A A+DFI VH +AG RS T+ + YL
Sbjct: 46 CMTHLHYKWIPVEDSHTADISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYL 105
Query: 186 MTPDA-----AYDYVRSIRPRV 202
M A+DY++ R V
Sbjct: 106 MKTKQFRLKEAFDYIKQRRSMV 127
>pdb|3AWG|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
Length = 334
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 117 ETLVPTSLYHAHCIDHLVIPTRDYCFAPSLGDICRAVD--FICENALSRQTTYVHCKAGR 174
ET +Y DH V P+L D+ + +D + + +HCKAG+
Sbjct: 75 ETKFDNHVYRVMIDDHNV---------PTLVDLLKFIDDAKVWMTSDPDHVIAIHCKAGK 125
Query: 175 GRSTTVVICYLMTPDAAYDYVRS 197
GR+ T+V +L+ D +D +
Sbjct: 126 GRTGTLVSSWLLE-DGKFDTAKE 147
>pdb|1FPZ|A Chain A, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|B Chain B, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|C Chain C, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|D Chain D, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|E Chain E, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|F Chain F, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FQ1|A Chain A, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
Length = 212
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 143 APSLGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVICYLM------TPDAAYDYVR 196
P + C ++ + + + T +H G GRS V C L+ +P+ A D +R
Sbjct: 113 TPDIASCCEIMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLR 172
Query: 197 SIRPRVLLASAQWQAVLEYYNLRVNMACLYGHVADK 232
+R S Q + +Y L L H++ +
Sbjct: 173 DLR-----GSGAIQTIKQYNYLHEFRDKLAAHLSSR 203
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 81 DRVDEFLLLGAVPFPTDVPCLKELGVGGVITLNEPYETLVPTSLYHAHCIDHLVIPTRDY 140
D V L LG + L+ LG+ V+ + P + Y I +L + D
Sbjct: 3 DEVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEA-YEGLGIRYLGVEAHDS 61
Query: 141 -CFAPSLGDICRAVDFICENALSRQ--TTYVHCKAGRGRSTTVVICYLM 186
F S+ A DFI ALS+ VHC G RS T+V+ YLM
Sbjct: 62 PAFDMSI-HFQTAADFI-HRALSQPGGKILVHCAVGVSRSATLVLAYLM 108
>pdb|3AWE|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
Length = 334
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
Query: 117 ETLVPTSLYHAHCIDHLVIPTRDYCFAPSLGDICRAVD--FICENALSRQTTYVHCKAGR 174
ET +Y DH V P+L D+ + +D + + +HCK G+
Sbjct: 75 ETKFDNHVYRVMIDDHNV---------PTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGK 125
Query: 175 GRSTTVVICYLMTPDAAYDYVRS 197
GR+ T+V +L+ D +D +
Sbjct: 126 GRTGTLVSSWLLE-DGKFDTAKE 147
>pdb|3V0I|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
256-576, E411f
Length = 324
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
Query: 117 ETLVPTSLYHAHCIDHLVIPTRDYCFAPSLGDICRAVD--FICENALSRQTTYVHCKAGR 174
ET +Y DH V P+L D+ + +D + + +HCK G+
Sbjct: 65 ETKFDNHVYRVMIDDHNV---------PTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGK 115
Query: 175 GRSTTVVICYLMTPDAAYDYVRS 197
GR+ T+V +L+ D +D +
Sbjct: 116 GRTGTLVSSWLL-EDGKFDTAKE 137
>pdb|3AWF|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
Length = 346
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
Query: 117 ETLVPTSLYHAHCIDHLVIPTRDYCFAPSLGDICRAVD--FICENALSRQTTYVHCKAGR 174
ET +Y DH V P+L D+ + +D + + +HCK G+
Sbjct: 87 ETKFDNHVYRVMIDDHNV---------PTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGK 137
Query: 175 GRSTTVVICYLMTPDAAYDYVRS 197
GR+ T+V +L+ D +D +
Sbjct: 138 GRTGTLVSSWLL-EDGKFDTAKE 159
>pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor
Length = 324
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 168 VHCKAGRGRSTTVVICYLM 186
+HCKAG+GR+ ++ YL+
Sbjct: 116 IHCKAGKGRTGVMICAYLL 134
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 135 IPTRDYCFAPSLGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVICYLMTP-----D 189
IP D A A+++I R VH +AG RS T+ + YLM +
Sbjct: 53 IPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLE 112
Query: 190 AAYDYVRSIR 199
A+++V+ R
Sbjct: 113 EAFEFVKQRR 122
>pdb|2OOQ|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptprt
pdb|2OOQ|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptprt
Length = 286
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 141 CFAPSLGDICRAVDFICENALSRQTTYVHCKAGRGRSTTVVICYLMTPDAA-------YD 193
C+A L R V F+ N VHC AG GR+ + M A ++
Sbjct: 192 CYATGLLGFVRQVKFL--NPPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFN 249
Query: 194 YVRSIRP-RVLLASAQWQAVLEYYNLRVNMACLYGHVA 230
VR +R RV L + Q V + + + ACL G+ A
Sbjct: 250 CVRELRAQRVNLVQTEEQYV--FVHDAILEACLCGNTA 285
>pdb|3CV7|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Ternary
Complex
pdb|3H4G|A Chain A, Structure Of Aldehyde Reductase Holoenzyme In Complex With
Potent Aldose Reductase Inhibitor Fidarestat:
Implications For Inhibitor Binding And Selectivity
pdb|3FX4|A Chain A, Porcine Aldehyde Reductase In Ternary Complex With
Inhibitor
Length = 325
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 157 CENALSRQTTYVHCKAGRGRSTTVVICYLMTPDAAYDYVRSIRPRVLLASAQWQAVLEYY 216
C L++ HC+A RG T L + D A+ R VLL QA+ E Y
Sbjct: 187 CHPYLAQNELIAHCQA-RGLEVTAY-SPLGSSDRAW---RDPNEPVLLEEPVVQALAEKY 241
Query: 217 NLRVNMACLYGHVADKVLRAPRSTTS----QELVAFD 249
N L V KV+ P+S T Q + FD
Sbjct: 242 NRSPAQILLRWQVQRKVICIPKSVTPSRILQNIQVFD 278
>pdb|1CWN|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Holoenzyme
Length = 324
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 157 CENALSRQTTYVHCKAGRGRSTTVVICYLMTPDAAYDYVRSIRPRVLLASAQWQAVLEYY 216
C L++ HC+A RG T L + D A+ R VLL QA+ E Y
Sbjct: 186 CHPYLAQNELIAHCQA-RGLEVTAY-SPLGSSDRAW---RDPNEPVLLEEPVVQALAEKY 240
Query: 217 NLRVNMACLYGHVADKVLRAPRSTT----SQELVAFD 249
N L V KV+ P+S T Q + FD
Sbjct: 241 NRSPAQILLRWQVQRKVICIPKSVTPSRIPQNIQVFD 277
>pdb|1AE4|A Chain A, Aldehyde Reductase Complexed With Cofactor And Inhibitor,
Alpha Carbon Atoms Only
Length = 325
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 157 CENALSRQTTYVHCKAGRGRSTTVVICYLMTPDAAYDYVRSIRPRVLLASAQWQAVLEYY 216
C L++ HC+A RG T L + D A+ R VLL QA+ E Y
Sbjct: 187 CHPYLAQNELIAHCQA-RGLEVTA-YSPLGSSDRAW---RDPNEPVLLEEPVVQALAEKY 241
Query: 217 NLRVNMACLYGHVADKVLRAPRSTT----SQELVAFD 249
N L V KV+ P+S T Q + FD
Sbjct: 242 NRSPAQILLRWQVQRKVICIPKSVTPSRIPQNIQVFD 278
>pdb|1HQT|A Chain A, The Crystal Structure Of An Aldehyde Reductase Y50f
Mutant- Nadp Complex And Its Implications For Substrate
Binding
Length = 326
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 157 CENALSRQTTYVHCKAGRGRSTTVVICYLMTPDAAYDYVRSIRPRVLLASAQWQAVLEYY 216
C L++ HC+A RG T L + D A+ R VLL QA+ E Y
Sbjct: 188 CHPYLAQNELIAHCQA-RGLEVTA-YSPLGSSDRAW---RDPNEPVLLEEPVVQALAEKY 242
Query: 217 NLRVNMACLYGHVADKVLRAPRSTT----SQELVAFD 249
N L V KV+ P+S T Q + FD
Sbjct: 243 NRSPAQILLRWQVQRKVICIPKSVTPSRIPQNIQVFD 279
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,675,282
Number of Sequences: 62578
Number of extensions: 383464
Number of successful extensions: 871
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 843
Number of HSP's gapped (non-prelim): 42
length of query: 339
length of database: 14,973,337
effective HSP length: 99
effective length of query: 240
effective length of database: 8,778,115
effective search space: 2106747600
effective search space used: 2106747600
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)