BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019550
(339 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S7X6|ACL5_ARATH Thermospermine synthase ACAULIS5 OS=Arabidopsis thaliana GN=ACL5
PE=1 SV=1
Length = 339
Score = 550 bits (1416), Expect = e-156, Method: Compositional matrix adjust.
Identities = 259/339 (76%), Positives = 293/339 (86%), Gaps = 3/339 (0%)
Query: 1 MGTEAVEILFENGFSKVCNDTDPN--INGNLQDCCWFEEVIDDDLKWSFALNRVLHKGTS 58
MG EAVE++F NGF ++ T P ++ N QDC W+EE IDDDLKWSFALN VLH+GTS
Sbjct: 1 MG-EAVEVMFGNGFPEIHKATSPTQTLHSNQQDCHWYEETIDDDLKWSFALNSVLHQGTS 59
Query: 59 EFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGS 118
E+QDIALLDTKRFGKVLVIDGKMQSAE DEFIYHECLIHP LL H NPKTVFIMGGGEGS
Sbjct: 60 EYQDIALLDTKRFGKVLVIDGKMQSAERDEFIYHECLIHPALLFHPNPKTVFIMGGGEGS 119
Query: 119 AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEK 178
AARE LKH ++EKVVMCDIDQEVVDFCRRFLTVN +AFC+KKL LV+ DAKAELEKR EK
Sbjct: 120 AAREILKHTTIEKVVMCDIDQEVVDFCRRFLTVNSDAFCNKKLELVIKDAKAELEKREEK 179
Query: 179 FDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIY 238
FD+I GDLADPVEGGPCYQLYTKSFY+ ILKPKL+ NGIFVTQAGPAGIFTHKEVF+SIY
Sbjct: 180 FDIIVGDLADPVEGGPCYQLYTKSFYQNILKPKLSPNGIFVTQAGPAGIFTHKEVFTSIY 239
Query: 239 NTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSRINAELLYLNGAS 298
NT+KQVFK+V AYTAHVPSFADTWGWVMASD F + +E+D RI+ R+N EL+YLN S
Sbjct: 240 NTMKQVFKYVKAYTAHVPSFADTWGWVMASDHEFDVEVDEMDRRIEERVNGELMYLNAPS 299
Query: 299 FLSSTTMNKAVYLSLLNETHVYTEEDARFIHGHGVAYNN 337
F+S+ T+NK + L+L ET VY+EE+ARFIHGHGVAY +
Sbjct: 300 FVSAATLNKTISLALEKETEVYSEENARFIHGHGVAYRH 338
>sp|Q975S5|SPEE_SULTO Probable spermidine synthase OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=speE PE=3 SV=1
Length = 300
Score = 219 bits (557), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 169/280 (60%), Gaps = 8/280 (2%)
Query: 48 ALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPK 107
A+ +V+ + + +Q L++ RFGK L++DGK+QS DEFIYHE L+HP LL NP+
Sbjct: 20 AITKVIAEEKTPYQRALLVELARFGKALILDGKIQSTITDEFIYHEALVHPLLLSINNPE 79
Query: 108 TVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLT-VNQEAFCSKKLNLVVN 166
+ I+GGGEG+ RE LKHK+++ V M DID V+DF +++L +Q AF + K LV+
Sbjct: 80 KILILGGGEGATLREVLKHKTIKNVTMVDIDPVVIDFAKKYLQEWHQGAFDNPKSKLVIE 139
Query: 167 DAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG 226
D +++ EKFD + DL DP++ P LYTK FYE + +++ GI P+
Sbjct: 140 DGYKFIKETKEKFDAVVIDLTDPIKDSPSQMLYTKEFYEEV--KRISKWGIVTQATSPSF 197
Query: 227 IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQ--PFSINAEEIDNRIK 284
E FS IYNTIK VFK V A +VP+F WG+V ASD+ P + EEI+NRIK
Sbjct: 198 SL---ETFSIIYNTIKHVFKKVSAGITYVPAFDGLWGFVYASDEVNPAEFSKEEINNRIK 254
Query: 285 SRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEED 324
RI+ L + +G + ++ ++ K + L E + T E+
Sbjct: 255 ERIDGSLRFYDGETHITMFSIPKHIREVLEKENKISTREN 294
>sp|Q5SK28|SPEE_THET8 Spermidine synthase OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=speE PE=1 SV=1
Length = 314
Score = 211 bits (537), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 174/290 (60%), Gaps = 7/290 (2%)
Query: 49 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKT 108
+ RV+ G + FQD L ++K FGKVL++D +QS E DE+IYHE L+HP +L H PK
Sbjct: 21 MERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKR 80
Query: 109 VFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTV-NQEAFCSKKLNLVVND 167
V I+GGGEG+ RE LKH ++EK VM DID E+V+ +R + +Q AF + LV++D
Sbjct: 81 VLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDD 140
Query: 168 AKAELEKRNEKFDVIFGDLADPV-EGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG 226
A+A LE+ E++DV+ DL DPV E P LYT FY R++K LN G+ QAG
Sbjct: 141 ARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFY-RLVKAHLNPGGVMGMQAG-MI 198
Query: 227 IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASD--QPFSINAEEIDNRIK 284
+ TH V ++ T+++ F++V +Y H+P F +G+++ASD P + + I+ RI+
Sbjct: 199 LLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLASDAFDPAAFSEGVIEARIR 258
Query: 285 SRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFIHGHGVA 334
R N L +L + + K + +L ET V T+++ ++ G A
Sbjct: 259 ER-NLALRHLTAPYLEAMFVLPKDLLEALEKETMVSTDQNPFYVTPEGEA 307
>sp|Q72K55|SPEE_THET2 Spermidine synthase OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=speE PE=3 SV=1
Length = 314
Score = 211 bits (537), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 174/290 (60%), Gaps = 7/290 (2%)
Query: 49 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKT 108
+ RV+ G + FQD L ++K FGKVL++D +QS E DE+IYHE L+HP +L H PK
Sbjct: 21 MERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKR 80
Query: 109 VFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTV-NQEAFCSKKLNLVVND 167
V I+GGGEG+ RE LKH ++EK VM DID E+V+ +R + +Q AF + LV++D
Sbjct: 81 VLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDD 140
Query: 168 AKAELEKRNEKFDVIFGDLADPV-EGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG 226
A+A LE+ E++DV+ DL DPV E P LYT FY R++K LN G+ QAG
Sbjct: 141 ARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFY-RLVKAHLNPGGVMGMQAG-MI 198
Query: 227 IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASD--QPFSINAEEIDNRIK 284
+ TH V ++ T+++ F++V +Y H+P F +G+++ASD P + + I+ RI+
Sbjct: 199 LLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLASDAFDPAAFSEGVIEARIR 258
Query: 285 SRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFIHGHGVA 334
R N L +L + + K + +L ET V T+++ ++ G A
Sbjct: 259 ER-NLALRHLTAPYLEAMFVLPKDLLEALEKETMVSTDQNPFYVTPEGEA 307
>sp|Q4JAZ8|SPEE_SULAC Probable spermidine synthase OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=speE PE=3 SV=1
Length = 302
Score = 207 bits (528), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 167/280 (59%), Gaps = 6/280 (2%)
Query: 48 ALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPK 107
A+ R+L + SEFQ + L + RFGK L+IDGK+QS DEFIYHE L+HP L+ ++P+
Sbjct: 20 AIKRILIEERSEFQRVILAELFRFGKALIIDGKIQSTLADEFIYHESLVHPLLISLEDPE 79
Query: 108 TVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLT-VNQEAFCSKKLNLVVN 166
+ I+GGGEG+ REAL++KS+ KV M DID V+ F ++ L + +F + NL++
Sbjct: 80 NILILGGGEGATLREALRYKSVRKVTMVDIDPVVIKFAKQNLQEWHMGSFDDSRTNLIIG 139
Query: 167 DAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG 226
D +++ NEK++ I DL DP++ P LYT FY R LK + NG VTQA
Sbjct: 140 DGYKFVKETNEKYNAIILDLTDPIQDSPSQLLYTSEFY-RDLKSIITPNGGLVTQATSPS 198
Query: 227 IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASD--QPFSINAEEIDNRIK 284
+ F+ IY+T+K VFK+V A +VPSF WG++ ASD P +N +I++RIK
Sbjct: 199 F--SLDTFAIIYSTLKTVFKNVSAGITYVPSFDGLWGFIYASDVTNPAHLNRNQINDRIK 256
Query: 285 SRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEED 324
R+ L + +G + + K + + NE V T E+
Sbjct: 257 ERVTGSLRFYDGETHEMLFRVPKYIREKIENEKRVSTREN 296
>sp|Q9YE02|SPEE_AERPE Probable spermidine synthase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=speE PE=3 SV=2
Length = 314
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 178/302 (58%), Gaps = 9/302 (2%)
Query: 33 CWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYH 92
WF E + D + V+ +G S FQ+IA++ GKVLV+DGK QS+E DEF+YH
Sbjct: 14 SWFLEWLTPDRATLKHIEDVIFQGRSRFQEIAVVRVSGEGKVLVLDGKTQSSESDEFMYH 73
Query: 93 ECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLT-V 151
E L+HP ++ H +P+ V I+GGGEG+ RE LKH+S+EK VM DID+ VV+ R L
Sbjct: 74 EALVHPAMILHGSPRKVLILGGGEGATLREVLKHRSVEKAVMVDIDETVVNVAREHLREW 133
Query: 152 NQEAFCSKKLNLVVNDAKAELEKRNEK-FDVIFGDLADPVEGGPCYQLYTKSFYERILKP 210
++ AF + +V++DA + + E FDV+ DL DP+E GP +LY++ +Y R++K
Sbjct: 134 HRGAFDDPRAEVVIDDAWNYVASKAETGFDVVIADLVDPLEAGPATRLYSEEYY-RMVKD 192
Query: 211 KLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASD- 269
+N G+FVTQA T E + I NT+ +VFKHV +Y +VPSF WG+V+ASD
Sbjct: 193 VMNPGGVFVTQAVSISHLT--EYHAIIRNTVARVFKHVESYGVYVPSFDSMWGFVVASDD 250
Query: 270 -QPFSINAEE-IDNRIKSRIN-AELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDAR 326
P + + R+ ++ AEL +L+ AS L + K ++ E T ++
Sbjct: 251 KDPRILGDRGFFETRLSHQLQGAELRFLDYASMLHMLNIPKMYREAIAREKRYATLDNQV 310
Query: 327 FI 328
F+
Sbjct: 311 FL 312
>sp|Q9UXE4|SPEE_SULSO Probable spermidine synthase OS=Sulfolobus solfataricus (strain
ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=speE PE=3
SV=1
Length = 301
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 175/282 (62%), Gaps = 5/282 (1%)
Query: 49 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCH-QNPK 107
+ +VL + + +Q + L++ RFGK L+IDGK+QS DE IYHE L+HP LL + PK
Sbjct: 21 IEKVLAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLTKPPK 80
Query: 108 TVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVN 166
+V I+GGGEG+ RE LK+KS+EK VM DID++V++F +++L +Q AF K+ NLV+
Sbjct: 81 SVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKYLYEWHQGAFEDKRTNLVIT 140
Query: 167 DAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG 226
D +++ EK+D I DL DP++ Y LYTK FYE+ L+ LN+ G VTQA
Sbjct: 141 DGLKFIKETKEKYDAIILDLTDPIKNSTSYMLYTKEFYEK-LREILNERGGIVTQATSPS 199
Query: 227 IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSR 286
EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+D++I R
Sbjct: 200 F--SLEVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVDSKINER 257
Query: 287 INAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 328
I+ +L + +G S S ++ K + T + TE+D ++
Sbjct: 258 IDGQLRFYDGYSHKISFSLPKNIKSEFQKITKISTEKDPIYV 299
>sp|Q9HV34|SPEE2_PSEAE Spermidine synthase 2 OS=Pseudomonas aeruginosa (strain ATCC 15692
/ PAO1 / 1C / PRS 101 / LMG 12228) GN=speE2 PE=3 SV=1
Length = 349
Score = 188 bits (478), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 163/272 (59%), Gaps = 14/272 (5%)
Query: 44 KWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCH 103
++ + L RVL++G + +Q++ + DT + +VL++DG +QSAE DE +YHE L+ P +L H
Sbjct: 43 QYVYRLRRVLYQGRTRWQNVLIADTYNYDRVLMLDGAIQSAESDESLYHELLVQPAMLAH 102
Query: 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLN 162
P+ V I+GGGEG+ RE L H S+ + VM D+D+E+V+ CR L +Q AF +
Sbjct: 103 DEPRDVLIIGGGEGATLREVLSHASVRRAVMVDLDRELVELCREHLFQWHQGAFDDPRCE 162
Query: 163 LVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222
L+ D +A LE+ +DV+ D+ D ++ GP LYT+ FYE +L +L G+ Q
Sbjct: 163 LLAEDGRAYLERDPSLYDVVIIDVVDMLDNGPAQALYTRQFYE-LLHSRLRPGGVVAVQ- 220
Query: 223 GPAGI-FTHKE--VFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSIN---A 276
G+ F+H + +++ T++ VF V +Y A VPSF +WG+++ASD N A
Sbjct: 221 ---GLEFSHSDDKPHAALARTLRSVFSQVHSYRATVPSFLSSWGFLLASDW-LDTNHWQA 276
Query: 277 EEIDNRIKSRINAELL-YLNGASFLSSTTMNK 307
E+ID RI+ ++ L +L+G + M++
Sbjct: 277 EDIDRRIERKLGPLWLDHLDGDYLKACFVMDR 308
>sp|Q2JQ57|SPEE_SYNJB Spermidine synthase OS=Synechococcus sp. (strain JA-2-3B'a(2-13))
GN=speE PE=3 SV=1
Length = 312
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 170/302 (56%), Gaps = 20/302 (6%)
Query: 34 WFEEVIDDDLKWSF---ALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFI 90
W +E W + A+ R+L + FQ++ + +T FGK L++DG QS VDEF+
Sbjct: 9 WVQEYFT---PWDYTARAVTRILAYRKTPFQEMLIAETGAFGKGLMLDGHWQSTTVDEFL 65
Query: 91 YHECLIHPPLL----CHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCR 146
YHE L+HP ++ P+ V ++GG EG+ RE L+ +S+E+VVM DID EVV CR
Sbjct: 66 YHEALVHPAMVQVVQAGGIPRRVLVLGGAEGATLREVLRWRSVEQVVMVDIDGEVVAACR 125
Query: 147 RFLT-VNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYE 205
L ++Q +F ++ +V+ DA L++ +DVI DL+DP+E GP Y+L+T+ F+
Sbjct: 126 EHLPEMHQGSFEDPRVEVVIADALDFLQETGPIWDVILSDLSDPIESGPAYRLFTQEFFR 185
Query: 206 RILKPKLNDNGIFVTQAGPAG-IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGW 264
+I + KL +G F QAGP G + H+ + I T+K VF V Y + P++ G+
Sbjct: 186 QI-RSKLQPDGAFTIQAGPTGPVELHQH--TRIVRTLKTVFAAVQPYAIYAPTYGGPLGF 242
Query: 265 VMASDQPFSIN--AEEIDNRIKSRINAE---LLYLNGASFLSSTTMNKAVYLSLLNETHV 319
+A+ P S E+ID + +++ E L +++G + L + + ++ ET V
Sbjct: 243 ALAAQDPISPRPEPEQIDQILSQQLDPERGALQFIDGITLLGLYQVPAHLRRAIAAETVV 302
Query: 320 YT 321
YT
Sbjct: 303 YT 304
>sp|C3NEA8|SPEE_SULIY Probable spermidine synthase OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=speE PE=3 SV=1
Length = 301
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 169/282 (59%), Gaps = 5/282 (1%)
Query: 49 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKT 108
+ +V + + +Q + L++ RFGK L+IDGK+QS DE IYHE L+HP LL P
Sbjct: 21 IEKVFAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLPKPPK 80
Query: 109 -VFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVN 166
V I+GGGEG+ RE LK+KS+EK VM DID++V++F +++L +Q AF K+ +LV+
Sbjct: 81 NVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKYLYEWHQGAFEDKRTSLVIT 140
Query: 167 DAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG 226
D + + +K+D I DL DP++ Y LYTK FYE+ L+ LN G VTQA
Sbjct: 141 DGLKFINETKDKYDAIILDLTDPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPS 199
Query: 227 IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSR 286
EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+++RI+ R
Sbjct: 200 F--SLEVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRER 257
Query: 287 INAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 328
I+ +L + + S S ++ K + T V TE+D ++
Sbjct: 258 ISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYV 299
>sp|C3MVE5|SPEE_SULIM Probable spermidine synthase OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=speE PE=3 SV=1
Length = 301
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 169/282 (59%), Gaps = 5/282 (1%)
Query: 49 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKT 108
+ +V + + +Q + L++ RFGK L+IDGK+QS DE IYHE L+HP LL P
Sbjct: 21 IEKVFAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLPKPPK 80
Query: 109 -VFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVN 166
V I+GGGEG+ RE LK+KS+EK VM DID++V++F +++L +Q AF K+ +LV+
Sbjct: 81 NVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKYLYEWHQGAFEDKRTSLVIT 140
Query: 167 DAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG 226
D + + +K+D I DL DP++ Y LYTK FYE+ L+ LN G VTQA
Sbjct: 141 DGLKFINETKDKYDAIILDLTDPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPS 199
Query: 227 IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSR 286
EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+++RI+ R
Sbjct: 200 F--SLEVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRER 257
Query: 287 INAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 328
I+ +L + + S S ++ K + T V TE+D ++
Sbjct: 258 ISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYV 299
>sp|C3MQ26|SPEE_SULIL Probable spermidine synthase OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=speE PE=3 SV=1
Length = 301
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 169/282 (59%), Gaps = 5/282 (1%)
Query: 49 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKT 108
+ +V + + +Q + L++ RFGK L+IDGK+QS DE IYHE L+HP LL P
Sbjct: 21 IEKVFAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLPKPPK 80
Query: 109 -VFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVN 166
V I+GGGEG+ RE LK+KS+EK VM DID++V++F +++L +Q AF K+ +LV+
Sbjct: 81 NVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKYLYEWHQGAFEDKRTSLVIT 140
Query: 167 DAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG 226
D + + +K+D I DL DP++ Y LYTK FYE+ L+ LN G VTQA
Sbjct: 141 DGLKFINETKDKYDAIILDLTDPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPS 199
Query: 227 IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSR 286
EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+++RI+ R
Sbjct: 200 F--SLEVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRER 257
Query: 287 INAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 328
I+ +L + + S S ++ K + T V TE+D ++
Sbjct: 258 ISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYV 299
>sp|C4KHC0|SPEE_SULIK Probable spermidine synthase OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=speE PE=3 SV=1
Length = 301
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 169/282 (59%), Gaps = 5/282 (1%)
Query: 49 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKT 108
+ +V + + +Q + L++ RFGK L+IDGK+QS DE IYHE L+HP LL P
Sbjct: 21 IEKVFAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLPKPPK 80
Query: 109 -VFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVN 166
V I+GGGEG+ RE LK+KS+EK VM DID++V++F +++L +Q AF K+ +LV+
Sbjct: 81 NVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKYLYEWHQGAFEDKRTSLVIT 140
Query: 167 DAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG 226
D + + +K+D I DL DP++ Y LYTK FYE+ L+ LN G VTQA
Sbjct: 141 DGLKFINETKDKYDAIILDLTDPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPS 199
Query: 227 IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSR 286
EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+++RI+ R
Sbjct: 200 F--SLEVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRER 257
Query: 287 INAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 328
I+ +L + + S S ++ K + T V TE+D ++
Sbjct: 258 ISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYV 299
>sp|C3N5P4|SPEE_SULIA Probable spermidine synthase OS=Sulfolobus islandicus (strain
M.16.27) GN=speE PE=3 SV=1
Length = 301
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 169/282 (59%), Gaps = 5/282 (1%)
Query: 49 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKT 108
+ +V + + +Q + L++ RFGK L+IDGK+QS DE IYHE L+HP LL P
Sbjct: 21 IEKVFAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLPKPPK 80
Query: 109 -VFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVN 166
V I+GGGEG+ RE LK+KS+EK VM DID++V++F +++L +Q AF K+ +LV+
Sbjct: 81 NVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKYLYEWHQGAFEDKRTSLVIT 140
Query: 167 DAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG 226
D + + +K+D I DL DP++ Y LYTK FYE+ L+ LN G VTQA
Sbjct: 141 DGLKFINETKDKYDAIILDLTDPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPS 199
Query: 227 IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSR 286
EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+++RI+ R
Sbjct: 200 F--SLEVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRER 257
Query: 287 INAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 328
I+ +L + + S S ++ K + T V TE+D ++
Sbjct: 258 ISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYV 299
>sp|C3NHE1|SPEE_SULIN Probable spermidine synthase OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=speE PE=3 SV=1
Length = 301
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 169/282 (59%), Gaps = 5/282 (1%)
Query: 49 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKT 108
+ +V + + +Q + L++ RFGK L+IDGK+QS DE IYHE L+HP LL P
Sbjct: 21 IEKVFAEEKTPYQHVTLVEFTRFGKGLIIDGKVQSTLYDEHIYHELLVHPLLLSLPKPPK 80
Query: 109 -VFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEAFCSKKLNLVVN 166
V I+GGGEG+ RE LK+KS+EK VM DID++V++F +++L +Q AF K+ +L++
Sbjct: 81 NVLILGGGEGATLREVLKYKSVEKAVMVDIDEKVIEFAKKYLYEWHQGAFEDKRTSLIIT 140
Query: 167 DAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG 226
D + + +K+D I DL DP++ Y LYTK FYE+ L+ LN G VTQA
Sbjct: 141 DGLKFINETKDKYDAIILDLTDPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPS 199
Query: 227 IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSR 286
EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+++RI+ R
Sbjct: 200 F--SLEVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRER 257
Query: 287 INAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 328
I+ +L + + S S ++ K + T V TE+D ++
Sbjct: 258 ISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYV 299
>sp|Q2JQS1|SPEE_SYNJA Spermidine synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=speE
PE=3 SV=1
Length = 312
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 162/287 (56%), Gaps = 18/287 (6%)
Query: 48 ALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLL----CH 103
A+ R+L + FQ++ + +T +GK L++DG QS DEF+YHE L+HP L+
Sbjct: 23 AITRILAYRKTRFQEMLIAETGAYGKGLMLDGHWQSTTADEFLYHEALVHPALVQVVQAG 82
Query: 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLT-VNQEAFCSKKLN 162
P+ V I+GG EG+ RE L+ +S+E+VVM DID EVV+ CR L ++Q +F +
Sbjct: 83 GIPRRVLILGGAEGATLREVLRWRSVEQVVMVDIDGEVVEACREHLPEMHQGSFADPRAE 142
Query: 163 LVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222
+V+ DA L + +D I DL+DPVE GP Y+L+T+ F+ R ++ KL G FV QA
Sbjct: 143 VVIADALDFLGQTEPIWDAILSDLSDPVEAGPAYRLFTQEFF-RQVRSKLQTAGAFVIQA 201
Query: 223 GPAG---IFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSIN--AE 277
GP G ++ H + I +T+K VF V Y + P++ G+ +A+ P S E
Sbjct: 202 GPTGPVELWQH----TRIVHTLKTVFAAVQPYAIYAPTYGGPLGFALAAQDPISSRPEPE 257
Query: 278 EIDNRIKSRINAE---LLYLNGASFLSSTTMNKAVYLSLLNETHVYT 321
++D + ++ + L +++G + L + + ++ ET VYT
Sbjct: 258 QVDQILAQHLDPDRGALRFIDGITLLGLYQVPAHLRRAIAAETTVYT 304
>sp|A4WHN0|SPEE_PYRAR Probable spermidine synthase OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=speE PE=3 SV=1
Length = 289
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 150/272 (55%), Gaps = 14/272 (5%)
Query: 49 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKT 108
+N VL S +Q+I +++T+ +G+ L++D +QS+ DE YHE L+HP ++ H P+
Sbjct: 24 VNEVLAVRRSRYQEIMVVETEDYGRALILDDYIQSSYYDEAFYHESLVHPAMVTHPAPRD 83
Query: 109 VFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLT-VNQEAFCSKKLNLVVND 167
V I+GGGEG+ RE LKH ++EK VM DID +VV+ +RFL ++Q AF S + +V+ D
Sbjct: 84 VLILGGGEGATLREVLKHPTVEKAVMVDIDGDVVELSKRFLPQMHQGAFDSPRAEVVIED 143
Query: 168 A----KAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223
K LE+ KFDV+ DL DP QLYT F +I+K L +GI VTQAG
Sbjct: 144 GFVYVKRALEE-GRKFDVVIMDLTDPYSSEIAKQLYTAEFINQIMK-LLRGDGIMVTQAG 201
Query: 224 PAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQ--PFSINAEEIDN 281
+ F E + + + +K F V Y +PSF +++ S + P ++ AEE+D
Sbjct: 202 NS--FYFPEAYDMVLSAVKANFPVVAEYNVWIPSFGYAVNYILGSLKYDPRALPAEEVDK 259
Query: 282 RIKSRINAELLYLNGASFLSSTTMNKAVYLSL 313
R+ R Y A MN VY L
Sbjct: 260 RLADRGVKTRFYTGRAHV---ALMNMPVYRRL 288
>sp|B0K172|SPEE_THEPX Spermidine synthase OS=Thermoanaerobacter sp. (strain X514) GN=speE
PE=3 SV=1
Length = 277
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 151/259 (58%), Gaps = 9/259 (3%)
Query: 33 CWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYH 92
WF E D++L++S + L + +Q +A+LDT +FG+VL +DG +Q+ E DEF+YH
Sbjct: 3 LWFTENQDENLRFSLKVKETLVVEKTPYQHLAILDTYQFGRVLTLDGILQTTEKDEFVYH 62
Query: 93 ECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVN 152
E ++H PL H+NPK+V I+GGG+G + RE LKH S+E+VV+ +ID+ VV +++L
Sbjct: 63 EMIVHVPLFTHKNPKSVLIVGGGDGGSVREVLKHPSVERVVLAEIDEAVVRNSKKYLPTI 122
Query: 153 QEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKL 212
+A ++ +++ D + + +FDV+ D DP+ GP L+T FY+ + + L
Sbjct: 123 SQALDDPRVEIMIGDGIKYVNEHKNEFDVVIVDSTDPI--GPAVGLFTSDFYKAVYE-CL 179
Query: 213 NDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADT-WGWVMASDQP 271
++GI V Q F + ++ + + K+++ AY A +P++ + W + M S +
Sbjct: 180 KEDGIIVAQT--ESPFIYGKLINKLSKMFKEIYPITKAYIATIPTYPGSLWTFTMGSKK- 236
Query: 272 FSINAEEIDNRIKSRINAE 290
+ EE+D RI+ +
Sbjct: 237 --YDPEEVDINSIPRIDTK 253
>sp|B0K9I5|SPEE_THEP3 Spermidine synthase OS=Thermoanaerobacter pseudethanolicus (strain
ATCC 33223 / 39E) GN=speE PE=3 SV=1
Length = 277
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 151/259 (58%), Gaps = 9/259 (3%)
Query: 33 CWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYH 92
WF E D++L++S + L + +Q +A+LDT +FG+VL +DG +Q+ E DEF+YH
Sbjct: 3 LWFTENQDENLRFSLKVKETLVVEKTPYQHLAILDTYQFGRVLTLDGILQTTEKDEFVYH 62
Query: 93 ECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVN 152
E ++H PL H+NPK+V I+GGG+G + RE LKH S+E+VV+ +ID+ VV +++L
Sbjct: 63 EMIVHVPLFTHKNPKSVLIVGGGDGGSVREVLKHPSVERVVLAEIDEAVVRNSKKYLPTI 122
Query: 153 QEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKL 212
+A ++ +++ D + + +FDV+ D DP+ GP L+T FY+ + + L
Sbjct: 123 SQALDDPRVEIMIGDGIKYVNEHKNEFDVVIVDSTDPI--GPAVGLFTSDFYKAVYE-CL 179
Query: 213 NDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADT-WGWVMASDQP 271
++GI V Q F + ++ + + K+++ AY A +P++ + W + M S +
Sbjct: 180 KEDGIIVAQT--ESPFIYGKLINKLSKMFKEIYPITKAYIATIPTYPGSLWTFTMGSKK- 236
Query: 272 FSINAEEIDNRIKSRINAE 290
+ EE+D RI+ +
Sbjct: 237 --YDPEEVDINSIPRIDTK 253
>sp|A3MU81|SPEE_PYRCJ Probable spermidine synthase OS=Pyrobaculum calidifontis (strain
JCM 11548 / VA1) GN=speE PE=3 SV=1
Length = 289
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 142/235 (60%), Gaps = 9/235 (3%)
Query: 58 SEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEG 117
S +Q+I + DT+ +G+VL++D +QS+ VDE YHE L+HP + H NP+ V I+GGGEG
Sbjct: 33 SPYQEIIIADTEDYGRVLILDDYIQSSYVDEQYYHESLVHPAMATHPNPRDVLILGGGEG 92
Query: 118 SAAREALKHKSLEKVVMCDIDQEVVDFCRRFLT-VNQEAFCSKKLNLVVNDAKAELE--- 173
+ REALKH ++++ VM DID++VV+ R +L ++Q AF + +V+ D +E
Sbjct: 93 ATLREALKHGTVKRAVMVDIDRDVVELSRAYLPQMHQGAFDDPRAKVVIQDGFVYVEEAI 152
Query: 174 KRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEV 233
K +K+DVI DL DP QLYT+ F+ +I + LND+G+ VTQAG + F +
Sbjct: 153 KAGDKYDVIIMDLTDPYSSDIAKQLYTREFFAKIRR-ILNDDGVVVTQAGNSFYFPAE-- 209
Query: 234 FSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQ--PFSINAEEIDNRIKSR 286
+ + +K F V Y +PSF +++ S + P ++ E+D R+++R
Sbjct: 210 YDMVLEGVKANFPIVAEYEVWIPSFGYAVNFILGSLRYDPHALTPSEVDERLRAR 264
>sp|Q8RA94|SPEE1_THETN Spermidine synthase 1 OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=speE1 PE=3
SV=1
Length = 277
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 148/259 (57%), Gaps = 9/259 (3%)
Query: 33 CWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYH 92
WF E D++L++S + L + +Q +A+LD+ +FG+VLV+DG +Q+ E DEF+YH
Sbjct: 3 LWFTEHQDENLRFSIKVKETLVVEKTPYQHLAILDSYQFGRVLVLDGILQTTEKDEFVYH 62
Query: 93 ECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVN 152
E ++H PL H+NPK V I+GGG+G + RE LKH S+E+VV+ +ID+ V+ +++L
Sbjct: 63 EMIVHVPLFTHKNPKDVLIIGGGDGGSVREVLKHSSVERVVLAEIDEAVIRNSKKYLPTI 122
Query: 153 QEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKL 212
A ++ +++ D + + +FDV+ D DP+ GP L+T FY R + L
Sbjct: 123 SSALDDPRVEIMIGDGIKYVNEHKNEFDVVIVDSTDPI--GPAVGLFTSDFY-RAVYECL 179
Query: 213 NDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADT-WGWVMASDQP 271
++GI V Q F + ++ + I K+++ AY A VP++ + W + M S +
Sbjct: 180 REDGIIVAQT--ESPFIYGKLINKISKMFKEIYPITKAYIATVPTYPGSLWTFTMGSKK- 236
Query: 272 FSINAEEIDNRIKSRINAE 290
+ EE+D RI +
Sbjct: 237 --YDPEEVDINSIPRIQTK 253
>sp|A1RU43|SPEE_PYRIL Probable spermidine synthase OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=speE PE=3 SV=1
Length = 291
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 154/259 (59%), Gaps = 12/259 (4%)
Query: 58 SEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEG 117
S++Q+I + DT+ FG+ L++D +QS+ DE YHE L+HP ++ H +P+ V I+GGGEG
Sbjct: 33 SKYQEIIIADTEDFGRALILDEYIQSSYYDEAYYHESLVHPAMVTHISPRDVLILGGGEG 92
Query: 118 SAAREALKHKSLEKVVMCDIDQEVVDFCRRFLT-VNQEAFCSKKLNLVVNDAKAELE--- 173
+ REALKH ++++ VM DID++VV+ +++L ++Q F + +V+ D +E
Sbjct: 93 ATLREALKHSTVKRAVMVDIDEDVVELSKKYLPQMHQGVFEDPRAQVVIEDGFVYVEKAL 152
Query: 174 KRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEV 233
K +KFDV+ DL DP QLY+ F+++++ L ++GI VTQAG + F E
Sbjct: 153 KNGDKFDVVIMDLTDPYSSEIAKQLYSPEFFKKLVG-LLREDGIIVTQAGNS--FFFPEA 209
Query: 234 FSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQ--PFSINAEEIDNRIKSRINAEL 291
+ + + +K F V Y +PSF +++ S + P S+ AEE++ R+K R +
Sbjct: 210 YDMVLHGVKSSFPVVAEYNVWIPSFGYAVNYIIGSLKYDPTSLTAEEVEKRLKER-GVKT 268
Query: 292 LYLNGASFLSSTTMNKAVY 310
L+ +G + + MN +Y
Sbjct: 269 LFYSGKTHVG--LMNLPIY 285
>sp|Q8ZXM4|SPEE_PYRAE Probable spermidine synthase OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=speE
PE=3 SV=1
Length = 291
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 146/255 (57%), Gaps = 12/255 (4%)
Query: 58 SEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEG 117
S++Q I ++DT +G+ LV+D +QS+ DE YHE L+HP + H P V I+GGGEG
Sbjct: 33 SKYQGILIVDTDDYGRTLVLDDYIQSSYYDEIYYHESLVHPAVTTHPRPSDVLILGGGEG 92
Query: 118 SAAREALKHKSLEKVVMCDIDQEVVDFCRRFLT-VNQEAFCSKKLNLVVNDAKAELE--- 173
+ RE LKH ++++ VM DID +VV+ +++L ++Q AF + + + D +E
Sbjct: 93 ATLREVLKHNTVKRAVMVDIDGDVVELSKKYLPQMHQGAFDDPRSEVRIEDGFVYVENAL 152
Query: 174 KRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEV 233
KR EKFDV+ DL DP QLYT F+ ++ K L ++GI VTQAG + F E
Sbjct: 153 KRGEKFDVVIMDLTDPYSSDIAKQLYTPEFFGKV-KRLLREDGIVVTQAGNS--FYFPEA 209
Query: 234 FSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMAS--DQPFSINAEEIDNRIKSR-INAE 290
+ + +K F + Y+ +PSF +V+ S P S++AEE+D R+ R + AE
Sbjct: 210 YDYVLQGVKGNFPIIAEYSVWIPSFGYAVNFVLGSLKHDPHSLSAEEVDKRLSERGVRAE 269
Query: 291 LLYLNGASFLSSTTM 305
+ +G + ++ M
Sbjct: 270 --FYSGKTHIALMNM 282
>sp|B1YB61|SPEE_PYRNV Probable spermidine synthase OS=Pyrobaculum neutrophilum (strain
DSM 2338 / JCM 9278 / V24Sta) GN=speE PE=3 SV=1
Length = 291
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 142/244 (58%), Gaps = 9/244 (3%)
Query: 49 LNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKT 108
+N V S +Q+I + DT+ FG+ L++D +QS+ DE YHE L+HP + H +P
Sbjct: 24 INAVYVVKRSRYQEIVVADTEDFGRALILDDYIQSSYYDEVYYHESLVHPAMSTHPSPAD 83
Query: 109 VFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLT-VNQEAFCSKKLNLVVND 167
V I+GGGEG+ RE LKH+++++ VM DID +VV+ RR+L ++Q AF + +V+ D
Sbjct: 84 VLILGGGEGATLREVLKHRTVKRAVMVDIDGDVVEVARRYLPQMHQGAFDDPRAQVVIED 143
Query: 168 AKAELEK---RNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGP 224
+E+ +KFDV+ DL DP QLY F++++ + L ++G+ VTQAG
Sbjct: 144 GFVYVERALAAGDKFDVVIMDLTDPYSSDIAKQLYAPGFFKKV-RGLLREDGLVVTQAGN 202
Query: 225 AGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQ--PFSINAEEIDNR 282
+ F E + + + ++ F V Y+ +PSF +++ S + P ++ EE+D R
Sbjct: 203 S--FFFPEAYDMVLHGVRSSFPTVAEYSVWIPSFGYAVNYILGSLKYNPTALTPEEVDRR 260
Query: 283 IKSR 286
++ R
Sbjct: 261 LRER 264
>sp|B6YXJ9|SPEE_THEON Probable spermidine synthase OS=Thermococcus onnurineus (strain
NA1) GN=speE PE=3 SV=1
Length = 282
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 135/222 (60%), Gaps = 5/222 (2%)
Query: 46 SFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQN 105
F + L + +++Q + L +T+ FGK+LV+DG +Q E+ E YHE L+HP +L H N
Sbjct: 21 GFRVKERLFETQTKYQRLELYETEGFGKLLVLDGTVQLVEMGEESYHEPLVHPVMLAHPN 80
Query: 106 PKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVV 165
P+ V I+GGG+G RE L+HK++EK +M +ID+ V++ R ++ V + AF + L+V
Sbjct: 81 PRRVLIIGGGDGGTLREVLRHKTVEKAIMVEIDEMVIEVSRIYMNVARGAFEDPRAELIV 140
Query: 166 NDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPA 225
+D L+ +EKFDVI D DPV GP L+++ F+ R KLNDNG+++TQAG
Sbjct: 141 SDGVEYLKNTDEKFDVIIVDSTDPV--GPAKMLFSEGFF-RNAYEKLNDNGLYITQAGSV 197
Query: 226 GIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMA 267
+FT++ Y + +VF V ++ V +A W +++
Sbjct: 198 YLFTNE--LLDAYRDMGKVFDEVHYFSFPVIGYASPWSFLVG 237
>sp|A6T4R6|SPEE_KLEP7 Spermidine synthase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=speE PE=3 SV=1
Length = 286
Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 154/289 (53%), Gaps = 10/289 (3%)
Query: 29 LQDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDE 88
+ D + E + D F+++ VL+ ++ QD+ + D + FG+V+ +DG +Q+ E DE
Sbjct: 1 MADNPLWHETLHDHFGQYFSVDNVLYHEKTDHQDLIIFDNRAFGRVMALDGVVQTTERDE 60
Query: 89 FIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRF 148
FIYHE + H PLL H N K V I+GGG+G+ RE +H+S+E + M +ID VV FCR++
Sbjct: 61 FIYHEMMTHVPLLAHGNAKHVLIIGGGDGAMLREVSRHRSIETITMVEIDAGVVSFCRQY 120
Query: 149 L-TVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERI 207
L N A+ + LV++D + + + FDVI D DP+ GP L+T +FYE
Sbjct: 121 LPNHNAGAYDDPRFTLVIDDGVNFVNQTTQTFDVIISDCTDPI--GPGESLFTSAFYEG- 177
Query: 208 LKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGW 264
K LN GIFV Q G F ++ + + F+ V Y A +P++ T+ W
Sbjct: 178 CKRCLNPGGIFVAQNGVC--FLQQDEAVGSHRKLSHYFRDVSFYQAAIPTYYGGIMTFAW 235
Query: 265 VMASDQPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSL 313
++ +++E I R + N Y N A ++ + + ++ +L
Sbjct: 236 ASDNEALRHLSSEIIQARFH-KANLTCRYYNPAIHTAAFALPQYLHDAL 283
>sp|Q57761|SPEE_METJA Probable spermidine synthase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=speE PE=3 SV=1
Length = 293
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 151/265 (56%), Gaps = 9/265 (3%)
Query: 24 NINGNLQDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQS 83
N N + + WF E ++++ S + +L++ S FQ+I ++DT FGK L++D Q+
Sbjct: 2 NQNNDFKCHIWFTEYHNNNVALSVRVKDILYREKSGFQEIEIIDTYDFGKALILDNTFQT 61
Query: 84 AEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVD 143
E DEFIYHE + H PL H NP+ V ++GGG+G RE +KHKS+E V ++D++V++
Sbjct: 62 TERDEFIYHELISHIPLFTHPNPRNVLVIGGGDGGTVREVVKHKSVETVDFVELDEKVIE 121
Query: 144 FCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSF 203
C++++ ++K+NL++ D + + +K+DVI D DPV GP L+ K F
Sbjct: 122 ACKKYMPKLSCEIDNEKVNLIITDGIKYVAETEKKYDVIIVDCPDPV--GPAKGLFEKEF 179
Query: 204 YERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV-FKHVVAYTAHVPSFADT- 261
Y+ + K LND+GI V Q+ + ++ +I +K FK ++ YT +P++
Sbjct: 180 YKNVFKC-LNDDGIMVQQS--ESPLYNLDLIQNICRYLKDAGFKIIMPYTYPMPTYPSGF 236
Query: 262 WGWVMASDQ--PFSINAEEIDNRIK 284
W + +AS + P ++ I +K
Sbjct: 237 WSFTLASKKYNPLEVDEARIKEALK 261
>sp|A1JJM8|SPEE_YERE8 Spermidine synthase OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=speE PE=3 SV=1
Length = 287
Score = 161 bits (407), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 141/257 (54%), Gaps = 10/257 (3%)
Query: 30 QDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEF 89
Q W+E + + F++ VL++ +E QD+ + + G+V+ +DG +Q+ E DEF
Sbjct: 3 QKELWYE-TLHANFGQYFSVENVLYREKTEHQDLVIFENPVLGRVMALDGVVQTTERDEF 61
Query: 90 IYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL 149
IYHE + H PLL H K V I+GGG+G+ RE +HK++E++ M +ID VV+FCR++L
Sbjct: 62 IYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYL 121
Query: 150 TVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERIL 208
+ A+ + LV++D + + EKFDVI D DP+ GP L+T +FYE
Sbjct: 122 PNHSAGAYDDPRFKLVIDDGVNFVNQTTEKFDVIISDCTDPI--GPGESLFTSAFYEGCA 179
Query: 209 KPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWV 265
+ LN+ GIFV Q G F ++ +N + FK V Y A +P++ T+ W
Sbjct: 180 R-SLNEGGIFVAQNGVC--FLQQDEAVDSHNKLSHYFKDVSFYQAAIPTYYGGIMTFAWA 236
Query: 266 MASDQPFSINAEEIDNR 282
+ Q ++ + R
Sbjct: 237 TQNRQLRQLDITTLQQR 253
>sp|B5Y1R1|SPEE_KLEP3 Spermidine synthase OS=Klebsiella pneumoniae (strain 342) GN=speE
PE=3 SV=1
Length = 286
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 154/289 (53%), Gaps = 10/289 (3%)
Query: 29 LQDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDE 88
+ D + E + D F+++ VL+ ++ QD+ + D + FG+V+ +DG +Q+ E DE
Sbjct: 1 MADNPLWHETLHDHFGQYFSVDNVLYHEKTDHQDLIIFDNRAFGRVMALDGVVQTTERDE 60
Query: 89 FIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRF 148
FIYHE + H PLL H N K V I+GGG+G+ RE +H+S+E + M +ID VV FCR++
Sbjct: 61 FIYHEMMTHVPLLAHGNAKHVLIIGGGDGAMLREVSRHRSIETITMVEIDAGVVSFCRQY 120
Query: 149 LTVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERI 207
L + A+ + LV++D + + + FDVI D DP+ GP L+T +FYE
Sbjct: 121 LPNHSAGAYDDPRFTLVIDDGVNFVNQTTQTFDVIISDCTDPI--GPGESLFTSAFYEG- 177
Query: 208 LKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGW 264
K LN G+FV Q G F ++ + + F+ V Y A +P++ T+ W
Sbjct: 178 CKRCLNPGGVFVAQNGVC--FLQQDEAVGSHRKLSHYFRDVSFYQAAIPTYYGGIMTFAW 235
Query: 265 VMASDQPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSL 313
++ +++E I R + N Y N A ++ + + ++ +L
Sbjct: 236 ASDNEALRHLSSEIIQARFH-KANLTCRYYNPAIHTAAFALPQYLHDAL 283
>sp|A3DDA0|SPEE_CLOTH Spermidine synthase OS=Clostridium thermocellum (strain ATCC 27405
/ DSM 1237) GN=speE PE=3 SV=1
Length = 275
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 142/251 (56%), Gaps = 8/251 (3%)
Query: 34 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHE 93
WF E L + + LH +E+Q++A+++T++FG++L++DG +Q+ DEF+YHE
Sbjct: 4 WFTEYQTPTLGITCKTKKTLHSEKTEYQELAVIETEQFGRMLLLDGIIQTTVADEFVYHE 63
Query: 94 CLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQ 153
+ H PL H+NPK ++GGG+G + RE +KH S+EK V+C+ID+ V++ + +L
Sbjct: 64 MIAHVPLFTHKNPKKALVVGGGDGGSIREIVKHPSIEKAVLCEIDRRVIEVSKEYLPEIS 123
Query: 154 EAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLN 213
A ++K+ +VV D +++ +FDVI D DP+ GP L+ FY R + L
Sbjct: 124 CALDNEKVEVVVGDGIKYVKEHKNEFDVIIIDSTDPI--GPAEGLFAIDFY-RAVYDCLK 180
Query: 214 DNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADT-WGWVMASDQ-- 270
++GIFV Q F KE+ + I +K +F YT +P++ W + M S +
Sbjct: 181 EDGIFVAQT--ESPFIDKELITRIIRDVKSLFPITRLYTCAIPTYPTGYWCFTMGSKKYD 238
Query: 271 PFSINAEEIDN 281
P + + I +
Sbjct: 239 PLETDIDSIPD 249
>sp|Q66EH3|SPEE_YERPS Spermidine synthase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=speE PE=3 SV=1
Length = 296
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 140/257 (54%), Gaps = 10/257 (3%)
Query: 30 QDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEF 89
Q W+E + + F++ VL++ +E QD+ + + G+V+ +DG +Q+ E DEF
Sbjct: 3 QKELWYE-TLHANFGQYFSVENVLYREKTEHQDLVIFENPELGRVMALDGVVQTTERDEF 61
Query: 90 IYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL 149
IYHE + H PLL H K V I+GGG+G+ RE +HK++E++ M +ID VV+FCR++L
Sbjct: 62 IYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYL 121
Query: 150 TVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERIL 208
+ A+ + LV++D + + EKFDVI D DP+ GP L+T FYE
Sbjct: 122 PNHSAGAYDDPRFKLVIDDGVNFVNQTTEKFDVIISDCTDPI--GPGESLFTSVFYEGCA 179
Query: 209 KPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWV 265
+ LN+ GIFV Q G F ++ + +N + F V Y A +P++ T+ W
Sbjct: 180 R-SLNEGGIFVAQNGVC--FLQQDEAVNSHNKLSHYFSDVSFYQAAIPTYYGGIMTFAWA 236
Query: 266 MASDQPFSINAEEIDNR 282
+ ++ + NR
Sbjct: 237 TQNPALRQLDLATLQNR 253
>sp|B2K4I2|SPEE_YERPB Spermidine synthase OS=Yersinia pseudotuberculosis serotype IB
(strain PB1/+) GN=speE PE=3 SV=1
Length = 296
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 140/257 (54%), Gaps = 10/257 (3%)
Query: 30 QDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEF 89
Q W+E + + F++ VL++ +E QD+ + + G+V+ +DG +Q+ E DEF
Sbjct: 3 QKELWYE-TLHANFGQYFSVENVLYREKTEHQDLVIFENPELGRVMALDGVVQTTERDEF 61
Query: 90 IYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL 149
IYHE + H PLL H K V I+GGG+G+ RE +HK++E++ M +ID VV+FCR++L
Sbjct: 62 IYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYL 121
Query: 150 TVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERIL 208
+ A+ + LV++D + + EKFDVI D DP+ GP L+T FYE
Sbjct: 122 PNHSAGAYDDPRFKLVIDDGVNFVNQTTEKFDVIISDCTDPI--GPGESLFTSVFYEGCA 179
Query: 209 KPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWV 265
+ LN+ GIFV Q G F ++ + +N + F V Y A +P++ T+ W
Sbjct: 180 R-SLNEGGIFVAQNGVC--FLQQDEAVNSHNKLSHYFSDVSFYQAAIPTYYGGIMTFAWA 236
Query: 266 MASDQPFSINAEEIDNR 282
+ ++ + NR
Sbjct: 237 TQNPALRQLDLATLQNR 253
>sp|A7FM33|SPEE_YERP3 Spermidine synthase OS=Yersinia pseudotuberculosis serotype O:1b
(strain IP 31758) GN=speE PE=3 SV=1
Length = 296
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 140/257 (54%), Gaps = 10/257 (3%)
Query: 30 QDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEF 89
Q W+E + + F++ VL++ +E QD+ + + G+V+ +DG +Q+ E DEF
Sbjct: 3 QKELWYE-TLHANFGQYFSVENVLYREKTEHQDLVIFENPELGRVMALDGVVQTTERDEF 61
Query: 90 IYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL 149
IYHE + H PLL H K V I+GGG+G+ RE +HK++E++ M +ID VV+FCR++L
Sbjct: 62 IYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYL 121
Query: 150 TVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERIL 208
+ A+ + LV++D + + EKFDVI D DP+ GP L+T FYE
Sbjct: 122 PNHSAGAYDDPRFKLVIDDGVNFVNQTTEKFDVIISDCTDPI--GPGESLFTSVFYEGCA 179
Query: 209 KPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWV 265
+ LN+ GIFV Q G F ++ + +N + F V Y A +P++ T+ W
Sbjct: 180 R-SLNEGGIFVAQNGVC--FLQQDEAVNSHNKLSHYFSDVSFYQAAIPTYYGGIMTFAWA 236
Query: 266 MASDQPFSINAEEIDNR 282
+ ++ + NR
Sbjct: 237 TQNPALRQLDLATLQNR 253
>sp|B1JK45|SPEE_YERPY Spermidine synthase OS=Yersinia pseudotuberculosis serotype O:3
(strain YPIII) GN=speE PE=3 SV=1
Length = 296
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 140/257 (54%), Gaps = 10/257 (3%)
Query: 30 QDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEF 89
Q W+E + + F++ VL++ +E QD+ + + G+V+ +DG +Q+ E DEF
Sbjct: 3 QKELWYE-TLHANFGQYFSVENVLYREKTEHQDLVIFENPELGRVMALDGVVQTTERDEF 61
Query: 90 IYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL 149
IYHE + H PLL H K V I+GGG+G+ RE +HK++E++ M +ID VV+FCR++L
Sbjct: 62 IYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYL 121
Query: 150 TVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERIL 208
+ A+ + LV++D + + EKFDVI D DP+ GP L+T FYE
Sbjct: 122 PNHSAGAYDDPRFKLVIDDGVNFVNQTTEKFDVIISDCTDPI--GPGESLFTSVFYEGCA 179
Query: 209 KPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWV 265
+ LN+ GIFV Q G F ++ + +N + F V Y A +P++ T+ W
Sbjct: 180 R-SLNEGGIFVAQNGVC--FLQQDEAVNSHNKLSHYFSDVSFYQAAIPTYYGGIMTFAWA 236
Query: 266 MASDQPFSINAEEIDNR 282
+ ++ + NR
Sbjct: 237 TQNPALRQLDLATLQNR 253
>sp|A8GJ06|SPEE_SERP5 Spermidine synthase OS=Serratia proteamaculans (strain 568) GN=speE
PE=3 SV=1
Length = 287
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 138/242 (57%), Gaps = 12/242 (4%)
Query: 34 WFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHE 93
W+E + + F++ VL++ +E QD+ + + G+V+ +DG +Q+ E DEFIYHE
Sbjct: 7 WYE-TLHANFGQYFSVENVLYREKTEHQDLVIFENPVLGRVMALDGVVQTTERDEFIYHE 65
Query: 94 CLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVN 152
+ H PLL H K V I+GGG+G+ RE +H+ +E++ M +ID VV+FCR++L N
Sbjct: 66 MMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHQGVEQITMVEIDAGVVEFCRQYLPNHN 125
Query: 153 QEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKL 212
A+ + LV++D + + +EKFDVI D DP+ GP L+T +FYE + L
Sbjct: 126 AGAYDDPRFKLVIDDGVNFVNQTDEKFDVIISDCTDPI--GPGESLFTSAFYEGCAR-CL 182
Query: 213 NDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWVMASD 269
N+ GIFV Q G F ++ + + + Q FK V Y A +P++ T+ W AS
Sbjct: 183 NEGGIFVAQNGVC--FLQQDEAVNSHTRLSQYFKDVSFYQAAIPTYYGGIMTFAW--ASQ 238
Query: 270 QP 271
P
Sbjct: 239 DP 240
>sp|O66473|SPEE1_AQUAE Spermidine synthase 1 OS=Aquifex aeolicus (strain VF5) GN=speE1
PE=3 SV=1
Length = 280
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 158/282 (56%), Gaps = 9/282 (3%)
Query: 29 LQDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDE 88
++D + E ++ + ++++L++G S +Q+I ++++ FG++L++DG +Q E E
Sbjct: 1 MRDIVFIERDPYAPIRHCYTVSKILYQGKSPYQEIQVIESPEFGRMLILDGVVQLDEKYE 60
Query: 89 FIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRF 148
F+YHE L H PL H NP+ V I+GGG+G RE LKH +E+ V+ DID+EV++ +++
Sbjct: 61 FLYHEYLAHVPLHAHPNPRNVLIIGGGDGGTLREVLKHDIVERAVLVDIDKEVIEVSKKY 120
Query: 149 LTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERIL 208
L F + +V D ++ +FDVI D DPV G + L T+ F+ +
Sbjct: 121 LPTLSVGFQDPRAIVVNEDGYKYVQDYENEFDVIIVDSTDPV--GFAHVLTTEDFFRHVY 178
Query: 209 KPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMAS 268
K L ++GIFV Q I H E+ S+I +K+VF V YT+ +P +A W +
Sbjct: 179 K-ALKEDGIFVAQT--ESIHYHLEMVSNIQQRLKKVFPIVDLYTSVIPIYAGYWWTFSIA 235
Query: 269 DQPFSINAEEIDNRIKSRI-NAELLYLNGASFLSSTTMNKAV 309
+ + + + +++++I +A+ ++ +FL + NK V
Sbjct: 236 SKKYPVRTPAREVKVQTKIYDAD---MHEYAFLPESFYNKIV 274
>sp|Q1RG70|SPEE_ECOUT Spermidine synthase OS=Escherichia coli (strain UTI89 / UPEC)
GN=speE PE=3 SV=1
Length = 288
Score = 158 bits (400), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 137/252 (54%), Gaps = 9/252 (3%)
Query: 35 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHEC 94
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEM 66
Query: 95 LIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQ 153
+ H PLL H + K V I+GGG+G+ RE +HK++E + M +ID VV FCR++L N
Sbjct: 67 MTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA 126
Query: 154 EAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLN 213
++ + LV++D + + N+ FDVI D DP+ GP L+T +FYE K LN
Sbjct: 127 GSYDDPRFKLVIDDGVNFVNQTNQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLN 183
Query: 214 DNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWVMASDQ 270
GIFV Q G F +E + + F V Y A +P++ T+ W +D
Sbjct: 184 PGGIFVAQNGVC--FLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDA 241
Query: 271 PFSINAEEIDNR 282
++ E I R
Sbjct: 242 LRHLSTEIIQAR 253
>sp|A1A7G7|SPEE_ECOK1 Spermidine synthase OS=Escherichia coli O1:K1 / APEC GN=speE PE=3
SV=1
Length = 288
Score = 158 bits (400), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 137/252 (54%), Gaps = 9/252 (3%)
Query: 35 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHEC 94
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEM 66
Query: 95 LIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQ 153
+ H PLL H + K V I+GGG+G+ RE +HK++E + M +ID VV FCR++L N
Sbjct: 67 MTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA 126
Query: 154 EAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLN 213
++ + LV++D + + N+ FDVI D DP+ GP L+T +FYE K LN
Sbjct: 127 GSYDDPRFKLVIDDGVNFVNQTNQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLN 183
Query: 214 DNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWVMASDQ 270
GIFV Q G F +E + + F V Y A +P++ T+ W +D
Sbjct: 184 PGGIFVAQNGVC--FLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDA 241
Query: 271 PFSINAEEIDNR 282
++ E I R
Sbjct: 242 LRHLSTEIIQAR 253
>sp|B7MBA4|SPEE_ECO45 Spermidine synthase OS=Escherichia coli O45:K1 (strain S88 / ExPEC)
GN=speE PE=3 SV=1
Length = 288
Score = 158 bits (400), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 137/252 (54%), Gaps = 9/252 (3%)
Query: 35 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHEC 94
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEM 66
Query: 95 LIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQ 153
+ H PLL H + K V I+GGG+G+ RE +HK++E + M +ID VV FCR++L N
Sbjct: 67 MTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA 126
Query: 154 EAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLN 213
++ + LV++D + + N+ FDVI D DP+ GP L+T +FYE K LN
Sbjct: 127 GSYDDPRFKLVIDDGVNFVNQTNQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLN 183
Query: 214 DNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWVMASDQ 270
GIFV Q G F +E + + F V Y A +P++ T+ W +D
Sbjct: 184 PGGIFVAQNGVC--FLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDA 241
Query: 271 PFSINAEEIDNR 282
++ E I R
Sbjct: 242 LRHLSTEIIQAR 253
>sp|B7UIG9|SPEE_ECO27 Spermidine synthase OS=Escherichia coli O127:H6 (strain E2348/69 /
EPEC) GN=speE PE=3 SV=1
Length = 288
Score = 158 bits (400), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 137/252 (54%), Gaps = 9/252 (3%)
Query: 35 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHEC 94
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEM 66
Query: 95 LIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQ 153
+ H PLL H + K V I+GGG+G+ RE +HK++E + M +ID VV FCR++L N
Sbjct: 67 MTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA 126
Query: 154 EAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLN 213
++ + LV++D + + N+ FDVI D DP+ GP L+T +FYE K LN
Sbjct: 127 GSYDDPRFKLVIDDGVNFVNQTNQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLN 183
Query: 214 DNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWVMASDQ 270
GIFV Q G F +E + + F V Y A +P++ T+ W +D
Sbjct: 184 PGGIFVAQNGVC--FLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDA 241
Query: 271 PFSINAEEIDNR 282
++ E I R
Sbjct: 242 LRHLSTEIIQAR 253
>sp|A8ALG8|SPEE_CITK8 Spermidine synthase OS=Citrobacter koseri (strain ATCC BAA-895 /
CDC 4225-83 / SGSC4696) GN=speE PE=3 SV=1
Length = 288
Score = 158 bits (400), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 139/255 (54%), Gaps = 9/255 (3%)
Query: 35 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHEC 94
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEM 66
Query: 95 LIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQ 153
+ H PLL H + K V I+GGG+G+ RE +HK++E + M +ID VV FCR++L N
Sbjct: 67 MTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVETITMVEIDAGVVSFCRQYLPNHNA 126
Query: 154 EAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLN 213
++ + NLV++D + + ++ FDVI D DP+ GP L+T +FYE K LN
Sbjct: 127 GSYDDPRFNLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSTFYEG-CKRCLN 183
Query: 214 DNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWVMASDQ 270
GIFV Q G F ++ + + F V Y A +P++ T+ W +D
Sbjct: 184 PGGIFVAQNGVC--FLQQDEAIDSHRKLSHYFGDVSFYQAAIPTYYGGIMTFAWATDNDA 241
Query: 271 PFSINAEEIDNRIKS 285
++ E I R +
Sbjct: 242 LRHLSTEIIQARFHT 256
>sp|A4TPU4|SPEE_YERPP Spermidine synthase OS=Yersinia pestis (strain Pestoides F) GN=speE
PE=3 SV=1
Length = 296
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 139/257 (54%), Gaps = 10/257 (3%)
Query: 30 QDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEF 89
Q W+E + + F++ VL + +E QD+ + + G+V+ +DG +Q+ E DEF
Sbjct: 3 QKELWYE-TLHANFGQYFSVENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEF 61
Query: 90 IYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL 149
IYHE + H PLL H K V I+GGG+G+ RE +HK++E++ M +ID VV+FCR++L
Sbjct: 62 IYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYL 121
Query: 150 TVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERIL 208
+ A+ + LV++D + + EKFDVI D DP+ GP L+T FYE
Sbjct: 122 PNHSAGAYDDPRFKLVIDDGVNFVNQTTEKFDVIISDCTDPI--GPGESLFTSVFYEGCA 179
Query: 209 KPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWV 265
+ LN+ GIFV Q G F ++ + +N + F V Y A +P++ T+ W
Sbjct: 180 R-SLNEGGIFVAQNGVC--FLQQDEAVNSHNKLSHYFSDVSFYQAAIPTYYGGIMTFAWA 236
Query: 266 MASDQPFSINAEEIDNR 282
+ ++ + NR
Sbjct: 237 TQNPALRQLDLATLQNR 253
>sp|Q1CLX1|SPEE_YERPN Spermidine synthase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=speE PE=3 SV=1
Length = 296
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 139/257 (54%), Gaps = 10/257 (3%)
Query: 30 QDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEF 89
Q W+E + + F++ VL + +E QD+ + + G+V+ +DG +Q+ E DEF
Sbjct: 3 QKELWYE-TLHANFGQYFSVENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEF 61
Query: 90 IYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL 149
IYHE + H PLL H K V I+GGG+G+ RE +HK++E++ M +ID VV+FCR++L
Sbjct: 62 IYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYL 121
Query: 150 TVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERIL 208
+ A+ + LV++D + + EKFDVI D DP+ GP L+T FYE
Sbjct: 122 PNHSAGAYDDPRFKLVIDDGVNFVNQTTEKFDVIISDCTDPI--GPGESLFTSVFYEGCA 179
Query: 209 KPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWV 265
+ LN+ GIFV Q G F ++ + +N + F V Y A +P++ T+ W
Sbjct: 180 R-SLNEGGIFVAQNGVC--FLQQDEAVNSHNKLSHYFSDVSFYQAAIPTYYGGIMTFAWA 236
Query: 266 MASDQPFSINAEEIDNR 282
+ ++ + NR
Sbjct: 237 TQNPALRQLDLATLQNR 253
>sp|A9R1H4|SPEE_YERPG Spermidine synthase OS=Yersinia pestis bv. Antiqua (strain Angola)
GN=speE PE=3 SV=1
Length = 296
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 139/257 (54%), Gaps = 10/257 (3%)
Query: 30 QDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEF 89
Q W+E + + F++ VL + +E QD+ + + G+V+ +DG +Q+ E DEF
Sbjct: 3 QKELWYE-TLHANFGQYFSVENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEF 61
Query: 90 IYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL 149
IYHE + H PLL H K V I+GGG+G+ RE +HK++E++ M +ID VV+FCR++L
Sbjct: 62 IYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYL 121
Query: 150 TVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERIL 208
+ A+ + LV++D + + EKFDVI D DP+ GP L+T FYE
Sbjct: 122 PNHSAGAYDDPRFKLVIDDGVNFVNQTTEKFDVIISDCTDPI--GPGESLFTSVFYEGCA 179
Query: 209 KPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWV 265
+ LN+ GIFV Q G F ++ + +N + F V Y A +P++ T+ W
Sbjct: 180 R-SLNEGGIFVAQNGVC--FLQQDEAVNSHNKLSHYFSDVSFYQAAIPTYYGGIMTFAWA 236
Query: 266 MASDQPFSINAEEIDNR 282
+ ++ + NR
Sbjct: 237 TQNPALRQLDLATLQNR 253
>sp|Q8ZBJ8|SPEE_YERPE Spermidine synthase OS=Yersinia pestis GN=speE PE=3 SV=1
Length = 296
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 139/257 (54%), Gaps = 10/257 (3%)
Query: 30 QDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEF 89
Q W+E + + F++ VL + +E QD+ + + G+V+ +DG +Q+ E DEF
Sbjct: 3 QKELWYE-TLHANFGQYFSVENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEF 61
Query: 90 IYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL 149
IYHE + H PLL H K V I+GGG+G+ RE +HK++E++ M +ID VV+FCR++L
Sbjct: 62 IYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYL 121
Query: 150 TVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERIL 208
+ A+ + LV++D + + EKFDVI D DP+ GP L+T FYE
Sbjct: 122 PNHSAGAYDDPRFKLVIDDGVNFVNQTTEKFDVIISDCTDPI--GPGESLFTSVFYEGCA 179
Query: 209 KPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWV 265
+ LN+ GIFV Q G F ++ + +N + F V Y A +P++ T+ W
Sbjct: 180 R-SLNEGGIFVAQNGVC--FLQQDEAVNSHNKLSHYFSDVSFYQAAIPTYYGGIMTFAWA 236
Query: 266 MASDQPFSINAEEIDNR 282
+ ++ + NR
Sbjct: 237 TQNPALRQLDLATLQNR 253
>sp|Q1C3U7|SPEE_YERPA Spermidine synthase OS=Yersinia pestis bv. Antiqua (strain Antiqua)
GN=speE PE=3 SV=1
Length = 296
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 139/257 (54%), Gaps = 10/257 (3%)
Query: 30 QDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEF 89
Q W+E + + F++ VL + +E QD+ + + G+V+ +DG +Q+ E DEF
Sbjct: 3 QKELWYE-TLHANFGQYFSVENVLFREKTEHQDLVIFENPELGRVMALDGVVQTTERDEF 61
Query: 90 IYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL 149
IYHE + H PLL H K V I+GGG+G+ RE +HK++E++ M +ID VV+FCR++L
Sbjct: 62 IYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQYL 121
Query: 150 TVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERIL 208
+ A+ + LV++D + + EKFDVI D DP+ GP L+T FYE
Sbjct: 122 PNHSAGAYDDPRFKLVIDDGVNFVNQTTEKFDVIISDCTDPI--GPGESLFTSVFYEGCA 179
Query: 209 KPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWV 265
+ LN+ GIFV Q G F ++ + +N + F V Y A +P++ T+ W
Sbjct: 180 R-SLNEGGIFVAQNGVC--FLQQDEAVNSHNKLSHYFSDVSFYQAAIPTYYGGIMTFAWA 236
Query: 266 MASDQPFSINAEEIDNR 282
+ ++ + NR
Sbjct: 237 TQNPALRQLDLATLQNR 253
>sp|Q3Z5N9|SPEE_SHISS Spermidine synthase OS=Shigella sonnei (strain Ss046) GN=speE PE=3
SV=1
Length = 288
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 137/252 (54%), Gaps = 9/252 (3%)
Query: 35 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHEC 94
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEM 66
Query: 95 LIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQ 153
+ H PLL H + K V I+GGG+G+ RE +HK++E + M +ID +V FCR++L N
Sbjct: 67 MTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGIVSFCRQYLPNHNA 126
Query: 154 EAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLN 213
++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN
Sbjct: 127 GSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLN 183
Query: 214 DNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWVMASDQ 270
GIFV Q G F +E Y + F V Y A +P++ T+ W +D
Sbjct: 184 PGGIFVAQNGVC--FLQQEEAIDSYRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDA 241
Query: 271 PFSINAEEIDNR 282
++ E I R
Sbjct: 242 LRHLSTEIIQAR 253
>sp|B1I5Z0|SPEE_DESAP Spermidine synthase OS=Desulforudis audaxviator (strain MP104C)
GN=speE PE=3 SV=1
Length = 275
Score = 158 bits (399), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 136/250 (54%), Gaps = 8/250 (3%)
Query: 33 CWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYH 92
WF E +D+ S+ +N LH T+ FQ +A+LDT FG+ LV+DG +Q++ VDE++YH
Sbjct: 3 LWFTEKQNDNFAISYRVNETLHTETTPFQHLAVLDTVPFGRTLVLDGIVQTSVVDEYVYH 62
Query: 93 ECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVN 152
E + H PL H +P+ V I+GGG+G RE KH S+EK + +ID+ V+ +++L
Sbjct: 63 EMITHVPLNTHPDPRRVLIVGGGDGGTLREVTKHPSVEKATLVEIDERVIAASKKYLPEL 122
Query: 153 QEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKL 212
F S K +V+ D + + + FD++ D DP+ GP L++ FY I + L
Sbjct: 123 ACGFDSPKAEVVIGDGIKYVAEHKKTFDLVIVDSTDPI--GPAVGLFSLEFYRSIYE-AL 179
Query: 213 NDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADT-WGWVMASDQ- 270
D G+FV Q + + ++ IY I +F Y A +P++ W + + S +
Sbjct: 180 KDEGLFVAQT--ESPYFNTDLILRIYRDIAGIFPLARTYWACIPTYPGAMWSFTIGSKKH 237
Query: 271 -PFSINAEEI 279
P + E+I
Sbjct: 238 DPAQVAPEKI 247
>sp|A9MPN3|SPEE_SALAR Spermidine synthase OS=Salmonella arizonae (strain ATCC BAA-731 /
CDC346-86 / RSK2980) GN=speE PE=3 SV=1
Length = 286
Score = 158 bits (399), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 139/255 (54%), Gaps = 9/255 (3%)
Query: 35 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHEC 94
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEM 66
Query: 95 LIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQ 153
+ H PLL H + K V I+GGG+G+ RE +HK++E + M +ID VV FCR++L N
Sbjct: 67 MTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVETITMVEIDAGVVSFCRQYLPNHNA 126
Query: 154 EAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLN 213
++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN
Sbjct: 127 GSYDDPRFTLVIDDGVNFVNQTHQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLN 183
Query: 214 DNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWVMASDQ 270
GIFV Q G F ++ + + F V Y A +P++ T+ W +D
Sbjct: 184 PGGIFVAQNGVC--FLQQDEALDSHRKLSHYFSDVSFYQAAIPTYYGGIMTFAWATDNDA 241
Query: 271 PFSINAEEIDNRIKS 285
+++E I R +
Sbjct: 242 IRHLSSETIQARFHA 256
>sp|Q326B5|SPEE_SHIBS Spermidine synthase OS=Shigella boydii serotype 4 (strain Sb227)
GN=speE PE=3 SV=1
Length = 288
Score = 157 bits (398), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 139/252 (55%), Gaps = 9/252 (3%)
Query: 35 FEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHEC 94
+ E + D FA++ VL+ ++ QD+ + + FG+V+ +DG +Q+ E DEFIYHE
Sbjct: 7 WHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEM 66
Query: 95 LIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQ 153
+ H PLL H + K V I+GGG+G+ RE +HK++E + M +ID VV FCR++L N
Sbjct: 67 MTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA 126
Query: 154 EAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLN 213
+++ + LV++D + + ++ FDVI D DP+ GP L+T +FYE K LN
Sbjct: 127 DSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEG-CKRCLN 183
Query: 214 DNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFAD---TWGWVMASDQ 270
+GIFV Q G F +E + + F V Y A +P++ T+ W +D
Sbjct: 184 PSGIFVAQNGVC--FLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDA 241
Query: 271 PFSINAEEIDNR 282
++ E I R
Sbjct: 242 LRHLSTEIIQAR 253
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,030,236
Number of Sequences: 539616
Number of extensions: 5368847
Number of successful extensions: 12802
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 12302
Number of HSP's gapped (non-prelim): 247
length of query: 339
length of database: 191,569,459
effective HSP length: 118
effective length of query: 221
effective length of database: 127,894,771
effective search space: 28264744391
effective search space used: 28264744391
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)