Query 019550
Match_columns 339
No_of_seqs 301 out of 2959
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 03:31:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019550.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019550hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o4f_A Spermidine synthase; am 100.0 8.8E-65 3E-69 476.4 27.9 280 30-316 9-292 (294)
2 1uir_A Polyamine aminopropyltr 100.0 2.5E-54 8.6E-59 411.4 31.8 304 30-336 2-309 (314)
3 3adn_A Spermidine synthase; am 100.0 5E-54 1.7E-58 405.9 19.0 280 30-316 9-292 (294)
4 1iy9_A Spermidine synthase; ro 100.0 7.3E-52 2.5E-56 387.5 28.8 273 32-314 2-275 (275)
5 1inl_A Spermidine synthase; be 100.0 3.2E-49 1.1E-53 373.2 31.1 280 30-315 14-295 (296)
6 1mjf_A Spermidine synthase; sp 100.0 1.6E-49 5.5E-54 372.5 28.8 271 32-315 2-280 (281)
7 2i7c_A Spermidine synthase; tr 100.0 1.2E-49 4.2E-54 373.7 27.7 272 32-314 3-281 (283)
8 2b2c_A Spermidine synthase; be 100.0 6.8E-49 2.3E-53 374.0 28.6 267 39-314 42-314 (314)
9 2o07_A Spermidine synthase; st 100.0 1.1E-48 3.8E-53 371.0 28.4 280 28-315 16-302 (304)
10 2pt6_A Spermidine synthase; tr 100.0 1.5E-48 5.3E-53 372.6 26.8 279 30-315 39-320 (321)
11 2cmg_A Spermidine synthase; tr 100.0 2.7E-48 9.2E-53 361.1 21.8 256 33-314 1-257 (262)
12 3bwc_A Spermidine synthase; SA 100.0 3.3E-47 1.1E-51 360.6 26.8 278 28-314 13-302 (304)
13 1xj5_A Spermidine synthase 1; 100.0 3.1E-46 1.1E-50 358.5 28.3 278 30-316 43-332 (334)
14 3c6k_A Spermine synthase; sper 100.0 9.7E-47 3.3E-51 363.9 22.6 237 29-272 129-380 (381)
15 2qfm_A Spermine synthase; sper 100.0 2.3E-41 7.7E-46 325.3 24.4 222 41-270 126-361 (364)
16 3gjy_A Spermidine synthase; AP 100.0 1E-37 3.5E-42 296.3 24.5 247 58-326 29-295 (317)
17 1sui_A Caffeoyl-COA O-methyltr 99.6 2.9E-14 9.8E-19 130.4 15.0 151 104-270 78-246 (247)
18 3c3y_A Pfomt, O-methyltransfer 99.6 2.3E-14 7.8E-19 130.1 13.8 150 104-270 69-236 (237)
19 3ntv_A MW1564 protein; rossman 99.6 5.4E-14 1.8E-18 126.9 15.4 105 104-221 70-175 (232)
20 3c3p_A Methyltransferase; NP_9 99.6 4.3E-14 1.5E-18 125.1 14.4 149 105-270 56-209 (210)
21 3tfw_A Putative O-methyltransf 99.5 1.8E-13 6E-18 124.9 17.2 105 105-222 63-170 (248)
22 3duw_A OMT, O-methyltransferas 99.5 3.7E-13 1.3E-17 119.9 17.7 105 104-221 57-166 (223)
23 3dr5_A Putative O-methyltransf 99.5 1.9E-13 6.6E-18 122.9 15.4 102 108-221 59-162 (221)
24 3p9n_A Possible methyltransfer 99.5 2.3E-13 7.9E-18 118.4 14.6 109 104-223 43-154 (189)
25 3orh_A Guanidinoacetate N-meth 99.5 4E-14 1.4E-18 128.4 9.8 122 88-221 46-169 (236)
26 3r3h_A O-methyltransferase, SA 99.5 1.1E-13 3.7E-18 126.2 11.5 105 104-221 59-169 (242)
27 3tr6_A O-methyltransferase; ce 99.5 3.8E-13 1.3E-17 119.8 14.5 104 105-221 64-173 (225)
28 1xdz_A Methyltransferase GIDB; 99.5 9.6E-13 3.3E-17 119.1 16.3 147 105-270 70-219 (240)
29 3cbg_A O-methyltransferase; cy 99.5 6.5E-13 2.2E-17 119.9 15.0 149 105-269 72-231 (232)
30 2avd_A Catechol-O-methyltransf 99.5 7E-13 2.4E-17 118.4 14.6 105 104-221 68-178 (229)
31 2ozv_A Hypothetical protein AT 99.5 3.2E-13 1.1E-17 124.2 11.9 137 104-251 35-192 (260)
32 1dus_A MJ0882; hypothetical pr 99.5 1.5E-12 5.3E-17 112.0 15.4 143 104-269 51-193 (194)
33 3dxy_A TRNA (guanine-N(7)-)-me 99.4 8.6E-13 2.9E-17 118.4 13.7 128 105-243 34-165 (218)
34 2hnk_A SAM-dependent O-methylt 99.4 1E-12 3.4E-17 118.8 13.7 106 104-222 59-181 (239)
35 3u81_A Catechol O-methyltransf 99.4 4.1E-13 1.4E-17 119.9 10.9 107 105-222 58-170 (221)
36 1yzh_A TRNA (guanine-N(7)-)-me 99.4 1.6E-12 5.5E-17 115.4 14.2 130 104-244 40-172 (214)
37 3e05_A Precorrin-6Y C5,15-meth 99.4 2.4E-12 8.2E-17 113.1 14.9 127 104-251 39-165 (204)
38 4dzr_A Protein-(glutamine-N5) 99.4 3.8E-13 1.3E-17 117.9 9.7 154 104-271 29-206 (215)
39 3g89_A Ribosomal RNA small sub 99.4 4.1E-12 1.4E-16 116.3 16.9 147 104-269 79-228 (249)
40 2esr_A Methyltransferase; stru 99.4 4.4E-13 1.5E-17 115.0 9.6 109 104-224 30-140 (177)
41 3hm2_A Precorrin-6Y C5,15-meth 99.4 2.8E-12 9.6E-17 109.5 14.1 124 104-248 24-147 (178)
42 3fpf_A Mtnas, putative unchara 99.4 5.2E-13 1.8E-17 125.2 10.3 103 103-223 120-223 (298)
43 2igt_A SAM dependent methyltra 99.4 3.5E-12 1.2E-16 121.8 15.3 148 104-259 152-309 (332)
44 2fca_A TRNA (guanine-N(7)-)-me 99.4 4.3E-12 1.5E-16 113.1 14.9 129 105-244 38-169 (213)
45 3lpm_A Putative methyltransfer 99.4 3.6E-12 1.2E-16 116.7 14.1 128 105-244 49-191 (259)
46 2b3t_A Protein methyltransfera 99.4 1E-11 3.4E-16 114.8 16.7 147 104-268 108-274 (276)
47 1jsx_A Glucose-inhibited divis 99.4 2.7E-12 9.1E-17 112.7 12.2 141 105-270 65-205 (207)
48 3mb5_A SAM-dependent methyltra 99.4 1.8E-12 6.1E-17 117.8 11.1 125 104-251 92-220 (255)
49 2frn_A Hypothetical protein PH 99.4 7.4E-13 2.5E-17 123.0 8.1 130 104-250 124-253 (278)
50 3evz_A Methyltransferase; NYSG 99.4 7.9E-12 2.7E-16 111.6 14.4 136 104-251 54-203 (230)
51 2fhp_A Methylase, putative; al 99.4 2.6E-12 8.9E-17 110.6 10.8 107 105-223 44-155 (187)
52 2fpo_A Methylase YHHF; structu 99.4 2.3E-12 8E-17 113.8 10.7 106 105-223 54-161 (202)
53 2gpy_A O-methyltransferase; st 99.4 1.6E-12 5.3E-17 116.8 9.6 104 105-221 54-159 (233)
54 3grz_A L11 mtase, ribosomal pr 99.4 5.4E-12 1.9E-16 110.8 12.2 138 104-271 59-197 (205)
55 3njr_A Precorrin-6Y methylase; 99.3 1.4E-11 4.9E-16 109.0 14.7 121 104-248 54-174 (204)
56 2ift_A Putative methylase HI07 99.3 2.7E-12 9.1E-17 113.3 9.7 108 105-223 53-164 (201)
57 4gek_A TRNA (CMO5U34)-methyltr 99.3 1.7E-12 6E-17 119.7 8.7 108 103-221 68-177 (261)
58 1ws6_A Methyltransferase; stru 99.3 3.2E-12 1.1E-16 108.2 9.7 103 105-223 41-148 (171)
59 3ckk_A TRNA (guanine-N(7)-)-me 99.3 5.7E-12 2E-16 114.4 11.7 133 104-243 45-183 (235)
60 3mti_A RRNA methylase; SAM-dep 99.3 9.2E-12 3.1E-16 107.4 12.5 112 104-222 21-135 (185)
61 1l3i_A Precorrin-6Y methyltran 99.3 4.4E-11 1.5E-15 102.6 15.9 125 104-251 32-157 (192)
62 1zx0_A Guanidinoacetate N-meth 99.3 3.5E-12 1.2E-16 114.8 9.3 109 104-221 59-169 (236)
63 2b78_A Hypothetical protein SM 99.3 1.5E-11 5.2E-16 119.5 14.3 118 104-225 211-334 (385)
64 1g8a_A Fibrillarin-like PRE-rR 99.3 2.8E-11 9.5E-16 108.0 14.7 149 104-269 72-226 (227)
65 1fbn_A MJ fibrillarin homologu 99.3 2.2E-11 7.5E-16 109.4 13.9 150 104-270 73-228 (230)
66 3eey_A Putative rRNA methylase 99.3 1.9E-12 6.6E-17 112.9 6.6 115 104-222 21-139 (197)
67 2vdv_E TRNA (guanine-N(7)-)-me 99.3 1.2E-11 4.1E-16 112.3 11.7 117 105-222 49-173 (246)
68 3jwg_A HEN1, methyltransferase 99.3 5.7E-11 1.9E-15 105.2 15.4 109 104-221 28-140 (219)
69 3dlc_A Putative S-adenosyl-L-m 99.3 1.2E-11 4E-16 108.7 10.0 105 105-221 43-147 (219)
70 3kkz_A Uncharacterized protein 99.3 1.2E-11 4.2E-16 113.0 10.4 106 104-222 45-150 (267)
71 1nt2_A Fibrillarin-like PRE-rR 99.3 4.3E-11 1.5E-15 106.6 13.6 148 104-268 56-208 (210)
72 3f4k_A Putative methyltransfer 99.3 1.8E-11 6.2E-16 110.8 10.4 106 104-222 45-150 (257)
73 1nv8_A HEMK protein; class I a 99.3 4.3E-11 1.5E-15 111.6 13.3 111 105-223 123-250 (284)
74 3hem_A Cyclopropane-fatty-acyl 99.3 1.8E-11 6.1E-16 114.2 10.6 110 104-222 71-183 (302)
75 2yxd_A Probable cobalt-precorr 99.3 2.2E-10 7.5E-15 97.6 16.6 120 104-250 34-153 (183)
76 1yb2_A Hypothetical protein TA 99.3 2E-11 7E-16 112.7 10.8 124 104-251 109-235 (275)
77 3ajd_A Putative methyltransfer 99.3 4.1E-11 1.4E-15 110.9 12.9 137 104-250 82-235 (274)
78 3k6r_A Putative transferase PH 99.3 9.1E-12 3.1E-16 116.0 8.3 145 104-265 124-270 (278)
79 2nxc_A L11 mtase, ribosomal pr 99.3 3.5E-11 1.2E-15 110.2 12.1 134 104-268 119-253 (254)
80 3jwh_A HEN1; methyltransferase 99.3 2.2E-11 7.5E-16 107.8 10.4 112 104-221 28-140 (217)
81 2qm3_A Predicted methyltransfe 99.3 1.2E-11 4.3E-16 119.4 9.5 105 105-222 172-278 (373)
82 4hg2_A Methyltransferase type 99.3 6.6E-12 2.2E-16 115.6 7.1 99 103-222 37-135 (257)
83 2yvl_A TRMI protein, hypotheti 99.2 2.8E-11 9.7E-16 108.9 11.1 123 105-251 91-213 (248)
84 2pwy_A TRNA (adenine-N(1)-)-me 99.2 3.1E-11 1.1E-15 109.3 11.3 124 104-250 95-221 (258)
85 3dtn_A Putative methyltransfer 99.2 1E-11 3.5E-16 111.0 7.9 106 104-222 43-148 (234)
86 4dmg_A Putative uncharacterize 99.2 9.6E-11 3.3E-15 114.2 15.4 134 105-250 214-353 (393)
87 2ipx_A RRNA 2'-O-methyltransfe 99.2 3.3E-11 1.1E-15 108.2 11.1 104 104-222 76-182 (233)
88 3v97_A Ribosomal RNA large sub 99.2 5.6E-11 1.9E-15 124.0 14.3 116 105-224 539-659 (703)
89 3c0k_A UPF0064 protein YCCW; P 99.2 7.7E-11 2.6E-15 114.7 14.4 141 104-250 219-366 (396)
90 1o54_A SAM-dependent O-methylt 99.2 2.1E-11 7E-16 112.6 9.6 118 104-244 111-229 (277)
91 2qy6_A UPF0209 protein YFCK; s 99.2 3.2E-11 1.1E-15 111.1 10.8 149 105-271 60-248 (257)
92 1wxx_A TT1595, hypothetical pr 99.2 5.4E-11 1.8E-15 115.3 12.8 135 105-250 209-352 (382)
93 3a27_A TYW2, uncharacterized p 99.2 1.5E-11 5.2E-16 113.8 8.4 124 104-245 118-241 (272)
94 2as0_A Hypothetical protein PH 99.2 4.7E-11 1.6E-15 116.2 12.1 114 105-225 217-338 (396)
95 4htf_A S-adenosylmethionine-de 99.2 2.7E-11 9.2E-16 111.8 9.8 107 104-222 67-173 (285)
96 3ofk_A Nodulation protein S; N 99.2 1.2E-10 4.2E-15 102.6 12.8 130 104-251 50-186 (216)
97 3m6w_A RRNA methylase; rRNA me 99.2 1.4E-10 4.7E-15 115.3 14.5 136 104-250 100-253 (464)
98 1ve3_A Hypothetical protein PH 99.2 3.6E-11 1.2E-15 106.5 9.0 106 104-222 37-142 (227)
99 4dcm_A Ribosomal RNA large sub 99.2 3.8E-11 1.3E-15 116.4 9.8 133 105-251 222-354 (375)
100 2bm8_A Cephalosporin hydroxyla 99.2 1E-11 3.5E-16 112.6 5.5 99 105-222 81-187 (236)
101 1nkv_A Hypothetical protein YJ 99.2 2.9E-11 9.9E-16 109.4 8.4 105 104-221 35-139 (256)
102 3kr9_A SAM-dependent methyltra 99.2 1.5E-10 5.1E-15 104.6 12.9 120 104-244 14-133 (225)
103 3g07_A 7SK snRNA methylphospha 99.2 2.8E-11 9.7E-16 112.8 8.4 117 105-222 46-220 (292)
104 3id6_C Fibrillarin-like rRNA/T 99.2 2.6E-10 8.8E-15 103.5 14.2 149 104-269 75-230 (232)
105 2b25_A Hypothetical protein; s 99.2 5.5E-11 1.9E-15 112.9 10.0 123 104-244 104-235 (336)
106 3lbf_A Protein-L-isoaspartate 99.2 6.8E-11 2.3E-15 104.0 9.7 100 104-223 76-175 (210)
107 3e8s_A Putative SAM dependent 99.2 3.6E-10 1.2E-14 99.6 14.3 100 104-223 51-153 (227)
108 1i9g_A Hypothetical protein RV 99.2 8.9E-11 3E-15 107.9 10.8 126 104-250 98-227 (280)
109 3g5t_A Trans-aconitate 3-methy 99.2 7.5E-11 2.6E-15 109.8 10.3 106 104-220 35-147 (299)
110 3mgg_A Methyltransferase; NYSG 99.2 5.4E-11 1.9E-15 109.0 9.2 107 104-222 36-142 (276)
111 3e23_A Uncharacterized protein 99.2 2.1E-10 7.3E-15 100.9 12.6 149 104-271 42-203 (211)
112 3dh0_A SAM dependent methyltra 99.2 1E-10 3.5E-15 103.2 10.4 150 104-270 36-193 (219)
113 3dmg_A Probable ribosomal RNA 99.2 5.4E-11 1.9E-15 115.5 9.0 128 105-251 233-360 (381)
114 3ocj_A Putative exported prote 99.2 1.5E-10 5.2E-15 108.2 11.5 110 104-222 117-227 (305)
115 2dul_A N(2),N(2)-dimethylguano 99.2 1.1E-10 3.8E-15 113.2 10.8 107 105-222 47-164 (378)
116 4hc4_A Protein arginine N-meth 99.2 7.2E-11 2.5E-15 114.4 9.4 119 90-221 70-188 (376)
117 3gu3_A Methyltransferase; alph 99.2 4.2E-11 1.4E-15 110.9 7.4 105 104-222 21-126 (284)
118 3m4x_A NOL1/NOP2/SUN family pr 99.1 2.4E-10 8.3E-15 113.3 13.2 134 104-246 104-254 (456)
119 3lec_A NADB-rossmann superfami 99.1 4.2E-10 1.4E-14 101.9 13.4 151 104-276 20-170 (230)
120 1vl5_A Unknown conserved prote 99.1 6E-11 2.1E-15 107.9 8.0 104 104-221 36-139 (260)
121 3q7e_A Protein arginine N-meth 99.1 8.4E-11 2.9E-15 112.7 9.3 107 105-221 66-172 (349)
122 3bus_A REBM, methyltransferase 99.1 1.2E-10 4E-15 106.5 9.9 107 104-222 60-166 (273)
123 1pjz_A Thiopurine S-methyltran 99.1 2.3E-11 7.8E-16 107.5 4.9 107 104-217 21-135 (203)
124 3hnr_A Probable methyltransfer 99.1 7.7E-11 2.6E-15 104.1 8.3 101 105-222 45-145 (220)
125 1ixk_A Methyltransferase; open 99.1 2.5E-10 8.7E-15 107.9 12.3 115 104-224 117-248 (315)
126 2xvm_A Tellurite resistance pr 99.1 9.7E-11 3.3E-15 101.4 8.7 105 104-221 31-135 (199)
127 2p35_A Trans-aconitate 2-methy 99.1 5.1E-11 1.7E-15 107.8 7.2 101 104-222 32-132 (259)
128 1kpg_A CFA synthase;, cyclopro 99.1 1.6E-10 5.3E-15 106.7 10.1 106 104-222 63-168 (287)
129 3axs_A Probable N(2),N(2)-dime 99.1 8.2E-11 2.8E-15 114.6 8.6 104 105-222 52-158 (392)
130 1ej0_A FTSJ; methyltransferase 99.1 2.1E-10 7.1E-15 96.6 10.0 126 104-251 21-159 (180)
131 2gb4_A Thiopurine S-methyltran 99.1 1E-10 3.6E-15 107.2 8.7 109 105-220 68-189 (252)
132 1o9g_A RRNA methyltransferase; 99.1 2.1E-11 7.1E-16 110.8 3.9 112 105-220 51-212 (250)
133 3m33_A Uncharacterized protein 99.1 3.7E-11 1.3E-15 107.5 5.5 92 104-219 47-139 (226)
134 3ou2_A SAM-dependent methyltra 99.1 1.2E-10 4.2E-15 102.3 8.7 99 104-222 45-146 (218)
135 3r0q_C Probable protein argini 99.1 1.4E-10 4.8E-15 112.3 9.8 107 104-221 62-168 (376)
136 3g5l_A Putative S-adenosylmeth 99.1 1.1E-10 3.7E-15 105.6 8.4 103 105-223 44-146 (253)
137 3dli_A Methyltransferase; PSI- 99.1 2.9E-10 1E-14 102.2 11.0 101 104-223 40-141 (240)
138 2p7i_A Hypothetical protein; p 99.1 1.1E-10 3.9E-15 104.2 8.2 100 104-222 41-141 (250)
139 3m70_A Tellurite resistance pr 99.1 1.3E-10 4.6E-15 107.2 8.8 103 105-221 120-222 (286)
140 3gdh_A Trimethylguanosine synt 99.1 2.7E-11 9.4E-16 108.9 4.0 103 105-221 78-180 (241)
141 3tma_A Methyltransferase; thum 99.1 1.3E-10 4.4E-15 111.3 8.9 113 104-222 202-317 (354)
142 3h2b_A SAM-dependent methyltra 99.1 1.8E-10 6.3E-15 100.5 9.2 100 106-222 42-141 (203)
143 2yx1_A Hypothetical protein MJ 99.1 1.2E-10 4E-15 111.2 8.5 114 104-245 194-307 (336)
144 2ex4_A Adrenal gland protein A 99.1 1.6E-10 5.5E-15 104.0 8.9 106 105-221 79-184 (241)
145 3lcc_A Putative methyl chlorid 99.1 8.9E-11 3E-15 105.2 7.0 105 105-221 66-170 (235)
146 3ujc_A Phosphoethanolamine N-m 99.1 1.2E-10 4.1E-15 105.5 8.0 106 104-222 54-159 (266)
147 4df3_A Fibrillarin-like rRNA/T 99.1 1E-09 3.5E-14 99.6 14.0 147 104-267 76-229 (233)
148 2fyt_A Protein arginine N-meth 99.1 2.4E-10 8.2E-15 109.2 10.2 106 104-219 63-168 (340)
149 1wy7_A Hypothetical protein PH 99.1 2.9E-09 9.8E-14 93.3 16.4 117 105-244 49-165 (207)
150 1xxl_A YCGJ protein; structura 99.1 1.5E-10 5.1E-15 104.3 8.1 105 104-222 20-124 (239)
151 2fk8_A Methoxy mycolic acid sy 99.1 3.6E-10 1.2E-14 106.0 10.9 106 104-222 89-194 (318)
152 3vc1_A Geranyl diphosphate 2-C 99.1 1.7E-10 5.7E-15 108.3 8.5 106 104-222 116-221 (312)
153 1sqg_A SUN protein, FMU protei 99.1 9.2E-10 3.1E-14 108.3 14.0 115 104-224 245-376 (429)
154 3pfg_A N-methyltransferase; N, 99.1 1.9E-10 6.3E-15 104.8 8.3 101 104-221 49-150 (263)
155 2h00_A Methyltransferase 10 do 99.1 6.2E-11 2.1E-15 107.7 5.1 80 105-187 65-149 (254)
156 3g2m_A PCZA361.24; SAM-depende 99.1 8.3E-11 2.8E-15 109.5 6.1 110 104-223 81-191 (299)
157 3gnl_A Uncharacterized protein 99.1 1E-09 3.5E-14 100.2 13.1 120 104-244 20-139 (244)
158 2y1w_A Histone-arginine methyl 99.1 4.2E-10 1.4E-14 107.7 10.9 106 105-222 50-155 (348)
159 3cgg_A SAM-dependent methyltra 99.1 1.5E-09 5.3E-14 93.0 13.5 120 104-244 45-165 (195)
160 1r18_A Protein-L-isoaspartate( 99.1 1.3E-10 4.6E-15 103.8 6.8 107 104-224 83-196 (227)
161 2p8j_A S-adenosylmethionine-de 99.1 1.7E-10 6E-15 100.9 7.4 119 90-222 10-128 (209)
162 2pxx_A Uncharacterized protein 99.1 1.2E-10 4E-15 102.0 6.2 110 104-222 41-159 (215)
163 2o57_A Putative sarcosine dime 99.1 1.7E-10 5.7E-15 107.0 7.6 107 104-222 81-187 (297)
164 1wzn_A SAM-dependent methyltra 99.1 2.6E-10 8.9E-15 102.9 8.6 106 104-222 40-145 (252)
165 1dl5_A Protein-L-isoaspartate 99.1 2.2E-10 7.5E-15 108.1 8.4 102 104-223 74-176 (317)
166 4fsd_A Arsenic methyltransfera 99.1 1.6E-10 5.4E-15 111.9 7.5 111 104-221 82-202 (383)
167 1ne2_A Hypothetical protein TA 99.1 2E-09 6.8E-14 94.0 13.8 96 104-220 50-145 (200)
168 2yxl_A PH0851 protein, 450AA l 99.1 4.9E-10 1.7E-14 110.9 11.1 135 104-247 258-410 (450)
169 3dou_A Ribosomal RNA large sub 99.1 4.7E-10 1.6E-14 98.5 9.7 140 104-269 24-180 (191)
170 2pbf_A Protein-L-isoaspartate 99.1 1.4E-10 4.7E-15 103.4 6.3 107 104-223 79-194 (227)
171 2yxe_A Protein-L-isoaspartate 99.1 3.7E-10 1.3E-14 99.6 8.9 102 104-223 76-178 (215)
172 1y8c_A S-adenosylmethionine-de 99.1 2.4E-10 8.3E-15 102.1 7.7 106 104-222 36-142 (246)
173 2yqz_A Hypothetical protein TT 99.1 3.4E-10 1.2E-14 102.4 8.7 104 104-222 38-141 (263)
174 1g6q_1 HnRNP arginine N-methyl 99.1 3.8E-10 1.3E-14 107.2 9.2 106 105-220 38-143 (328)
175 3i9f_A Putative type 11 methyl 99.0 2E-10 6.8E-15 97.5 6.6 96 104-221 16-111 (170)
176 3d2l_A SAM-dependent methyltra 99.0 2.1E-10 7.2E-15 102.6 7.0 104 104-222 32-137 (243)
177 2kw5_A SLR1183 protein; struct 99.0 4.6E-10 1.6E-14 97.9 9.0 100 108-222 32-131 (202)
178 3bkw_A MLL3908 protein, S-aden 99.0 4E-10 1.4E-14 100.7 8.8 103 104-222 42-144 (243)
179 1xtp_A LMAJ004091AAA; SGPP, st 99.0 3E-10 1E-14 102.4 7.9 106 104-222 92-197 (254)
180 2frx_A Hypothetical protein YE 99.0 9E-10 3.1E-14 110.0 12.0 116 105-225 117-249 (479)
181 2pjd_A Ribosomal RNA small sub 99.0 9.9E-11 3.4E-15 111.7 4.9 127 105-251 196-323 (343)
182 3thr_A Glycine N-methyltransfe 99.0 4E-10 1.4E-14 104.1 8.8 115 105-222 57-175 (293)
183 1ri5_A MRNA capping enzyme; me 99.0 1.4E-10 4.7E-15 107.0 5.6 112 104-222 63-174 (298)
184 3sm3_A SAM-dependent methyltra 99.0 5E-10 1.7E-14 99.3 9.0 112 104-222 29-141 (235)
185 2plw_A Ribosomal RNA methyltra 99.0 4E-10 1.4E-14 98.2 8.1 125 104-251 21-177 (201)
186 3fzg_A 16S rRNA methylase; met 99.0 1.4E-09 4.8E-14 95.6 11.3 104 104-221 48-151 (200)
187 3ggd_A SAM-dependent methyltra 99.0 4.9E-10 1.7E-14 100.8 8.5 104 104-221 55-162 (245)
188 3l8d_A Methyltransferase; stru 99.0 4.6E-10 1.6E-14 100.4 8.3 102 104-222 52-153 (242)
189 3ccf_A Cyclopropane-fatty-acyl 99.0 5.2E-10 1.8E-14 102.9 8.7 99 104-222 56-154 (279)
190 1jg1_A PIMT;, protein-L-isoasp 99.0 2.8E-10 9.4E-15 102.4 6.5 102 104-224 90-191 (235)
191 3p2e_A 16S rRNA methylase; met 99.0 9.3E-11 3.2E-15 105.6 3.3 111 104-220 23-137 (225)
192 3vyw_A MNMC2; tRNA wobble urid 99.0 3.7E-09 1.3E-13 99.3 14.3 171 106-297 97-287 (308)
193 1i1n_A Protein-L-isoaspartate 99.0 6.8E-10 2.3E-14 98.8 8.8 107 104-224 76-184 (226)
194 1vbf_A 231AA long hypothetical 99.0 7.7E-10 2.6E-14 98.6 9.2 98 104-223 69-166 (231)
195 3mq2_A 16S rRNA methyltransfer 99.0 4.1E-10 1.4E-14 99.6 7.3 114 104-222 26-140 (218)
196 3q87_B N6 adenine specific DNA 99.0 1.4E-09 4.8E-14 93.2 10.4 121 104-250 22-146 (170)
197 3uwp_A Histone-lysine N-methyl 99.0 1.1E-09 3.6E-14 106.9 10.7 110 104-221 172-287 (438)
198 3bgv_A MRNA CAP guanine-N7 met 99.0 2.9E-10 9.8E-15 106.6 6.4 114 104-222 33-155 (313)
199 2vdw_A Vaccinia virus capping 99.0 8.5E-10 2.9E-14 103.7 9.3 114 104-222 47-169 (302)
200 1u2z_A Histone-lysine N-methyl 99.0 9E-10 3.1E-14 108.5 8.8 108 104-221 241-358 (433)
201 3dp7_A SAM-dependent methyltra 99.0 4.6E-10 1.6E-14 107.9 6.5 109 104-221 178-286 (363)
202 3bxo_A N,N-dimethyltransferase 99.0 9.7E-10 3.3E-14 98.0 8.0 101 104-222 39-141 (239)
203 2gs9_A Hypothetical protein TT 99.0 6.5E-10 2.2E-14 97.6 6.5 97 105-222 36-132 (211)
204 2qe6_A Uncharacterized protein 99.0 3.8E-09 1.3E-13 97.8 11.9 108 105-223 77-197 (274)
205 2nyu_A Putative ribosomal RNA 99.0 2.2E-09 7.4E-14 93.0 9.5 123 104-251 21-168 (196)
206 3i53_A O-methyltransferase; CO 98.9 3E-09 1E-13 100.5 10.3 106 105-222 169-274 (332)
207 3gwz_A MMCR; methyltransferase 98.9 5.5E-09 1.9E-13 100.5 12.3 106 104-221 201-306 (369)
208 1p91_A Ribosomal RNA large sub 98.9 1.7E-09 5.7E-14 98.8 7.8 95 104-222 84-178 (269)
209 3b3j_A Histone-arginine methyl 98.9 2.4E-09 8.3E-14 106.9 9.5 106 105-222 158-263 (480)
210 1qzz_A RDMB, aclacinomycin-10- 98.9 3.1E-09 1.1E-13 101.8 9.9 106 104-221 181-286 (374)
211 2jjq_A Uncharacterized RNA met 98.9 3.3E-09 1.1E-13 104.4 10.1 99 104-222 289-387 (425)
212 2avn_A Ubiquinone/menaquinone 98.9 2.3E-09 8E-14 97.6 8.1 99 104-222 53-152 (260)
213 3cc8_A Putative methyltransfer 98.9 1.6E-09 5.6E-14 95.5 6.9 99 104-222 31-130 (230)
214 3mcz_A O-methyltransferase; ad 98.9 2.2E-09 7.6E-14 102.1 8.3 107 106-221 180-286 (352)
215 2aot_A HMT, histamine N-methyl 98.9 2.5E-09 8.4E-14 99.3 8.3 110 105-222 52-172 (292)
216 3iv6_A Putative Zn-dependent a 98.9 4.8E-09 1.6E-13 96.7 10.0 105 104-223 44-149 (261)
217 3ege_A Putative methyltransfer 98.9 1E-09 3.5E-14 100.2 5.0 97 104-221 33-129 (261)
218 2f8l_A Hypothetical protein LM 98.9 7E-09 2.4E-13 98.9 10.9 132 105-246 130-278 (344)
219 3bkx_A SAM-dependent methyltra 98.9 3.5E-09 1.2E-13 96.7 8.5 109 104-222 42-159 (275)
220 3tm4_A TRNA (guanine N2-)-meth 98.9 3.3E-09 1.1E-13 102.4 8.4 110 104-220 216-328 (373)
221 3bt7_A TRNA (uracil-5-)-methyl 98.9 3.8E-08 1.3E-12 94.8 15.7 100 106-224 214-328 (369)
222 1x19_A CRTF-related protein; m 98.9 8.2E-09 2.8E-13 98.7 10.9 106 104-221 189-294 (359)
223 3sso_A Methyltransferase; macr 98.9 2.4E-09 8.2E-14 104.1 7.2 97 104-221 215-323 (419)
224 2r3s_A Uncharacterized protein 98.9 1.6E-09 5.6E-14 102.0 5.9 106 104-221 164-270 (335)
225 1tw3_A COMT, carminomycin 4-O- 98.9 5.5E-09 1.9E-13 99.6 9.3 106 104-221 182-287 (360)
226 2ip2_A Probable phenazine-spec 98.9 4.8E-09 1.6E-13 99.0 8.8 103 107-221 169-271 (334)
227 1uwv_A 23S rRNA (uracil-5-)-me 98.9 3.1E-08 1.1E-12 97.5 14.9 102 104-222 285-389 (433)
228 2i62_A Nicotinamide N-methyltr 98.9 4.3E-10 1.5E-14 101.9 1.4 114 105-222 56-198 (265)
229 3bzb_A Uncharacterized protein 98.9 8E-09 2.7E-13 95.7 10.0 108 105-221 79-204 (281)
230 2a14_A Indolethylamine N-methy 98.8 2.1E-10 7.1E-15 105.2 -1.2 114 105-222 55-197 (263)
231 3cvo_A Methyltransferase-like 98.8 6.2E-09 2.1E-13 92.4 8.3 101 105-221 30-153 (202)
232 3hp7_A Hemolysin, putative; st 98.8 5.2E-09 1.8E-13 97.9 7.6 125 74-221 55-184 (291)
233 2ih2_A Modification methylase 98.8 3.6E-09 1.2E-13 102.8 6.8 125 104-246 38-186 (421)
234 2b9e_A NOL1/NOP2/SUN domain fa 98.8 5.7E-08 1.9E-12 91.6 14.4 133 105-247 102-255 (309)
235 4e2x_A TCAB9; kijanose, tetron 98.8 9.2E-09 3.1E-13 100.2 9.3 103 104-222 106-208 (416)
236 3htx_A HEN1; HEN1, small RNA m 98.8 2.6E-08 8.9E-13 104.1 10.7 107 105-221 721-833 (950)
237 1vlm_A SAM-dependent methyltra 98.7 9.3E-09 3.2E-13 91.1 5.9 92 106-222 48-139 (219)
238 2g72_A Phenylethanolamine N-me 98.7 2.2E-09 7.6E-14 99.3 1.9 113 105-221 71-214 (289)
239 3giw_A Protein of unknown func 98.7 1E-07 3.5E-12 88.3 12.6 111 105-223 78-201 (277)
240 2r6z_A UPF0341 protein in RSP 98.7 1.6E-08 5.5E-13 93.0 6.7 80 105-189 83-172 (258)
241 3lst_A CALO1 methyltransferase 98.7 3.1E-08 1E-12 94.4 8.5 103 104-221 183-285 (348)
242 3opn_A Putative hemolysin; str 98.7 2.3E-08 7.9E-13 90.4 7.0 110 90-221 24-136 (232)
243 4a6d_A Hydroxyindole O-methylt 98.7 3.5E-08 1.2E-12 94.5 8.4 103 105-221 179-282 (353)
244 2p41_A Type II methyltransfera 98.7 1.9E-08 6.4E-13 94.7 6.3 127 105-250 82-215 (305)
245 3ll7_A Putative methyltransfer 98.7 2.9E-08 1E-12 97.0 7.8 79 106-188 94-173 (410)
246 2wa2_A Non-structural protein 98.7 9.5E-09 3.2E-13 95.5 3.9 133 104-251 81-218 (276)
247 3lcv_B Sisomicin-gentamicin re 98.7 2.1E-08 7.1E-13 92.1 6.0 104 104-220 131-234 (281)
248 1m6y_A S-adenosyl-methyltransf 98.7 7.8E-08 2.7E-12 90.4 10.0 78 105-187 26-107 (301)
249 2oxt_A Nucleoside-2'-O-methylt 98.6 1.2E-08 4.2E-13 94.1 3.5 133 104-251 73-210 (265)
250 3ldg_A Putative uncharacterize 98.6 8.3E-08 2.8E-12 93.2 9.3 110 105-222 194-343 (384)
251 1fp1_D Isoliquiritigenin 2'-O- 98.6 3.8E-08 1.3E-12 94.6 6.3 98 104-221 208-305 (372)
252 1zq9_A Probable dimethyladenos 98.6 1.2E-07 4E-12 88.2 9.5 77 104-188 27-103 (285)
253 1fp2_A Isoflavone O-methyltran 98.6 5.4E-08 1.8E-12 92.8 7.2 98 104-221 187-287 (352)
254 2xyq_A Putative 2'-O-methyl tr 98.6 1.9E-07 6.6E-12 87.2 10.8 119 104-250 62-194 (290)
255 3k0b_A Predicted N6-adenine-sp 98.6 5.4E-08 1.8E-12 94.8 7.3 110 105-222 201-350 (393)
256 2oo3_A Protein involved in cat 98.6 3.9E-07 1.3E-11 84.4 12.6 151 105-274 91-249 (283)
257 3reo_A (ISO)eugenol O-methyltr 98.6 3E-08 1E-12 95.4 5.3 98 104-221 202-299 (368)
258 3p9c_A Caffeic acid O-methyltr 98.6 3.8E-08 1.3E-12 94.6 5.5 98 104-221 200-297 (364)
259 3ldu_A Putative methylase; str 98.6 4.6E-08 1.6E-12 95.0 6.0 110 105-222 195-344 (385)
260 1af7_A Chemotaxis receptor met 98.6 1.1E-07 3.6E-12 88.3 7.8 112 105-222 105-252 (274)
261 3gru_A Dimethyladenosine trans 98.6 8.9E-08 3E-12 89.7 7.2 75 104-187 49-123 (295)
262 2oyr_A UPF0341 protein YHIQ; a 98.6 6.1E-08 2.1E-12 89.1 6.0 82 107-190 90-176 (258)
263 4azs_A Methyltransferase WBDD; 98.6 1.9E-07 6.4E-12 95.0 10.2 77 104-186 65-142 (569)
264 3tqs_A Ribosomal RNA small sub 98.5 1.2E-07 4.2E-12 86.9 7.6 75 104-187 28-105 (255)
265 3fut_A Dimethyladenosine trans 98.5 1.6E-07 5.4E-12 87.0 8.1 96 108-221 49-144 (271)
266 3frh_A 16S rRNA methylase; met 98.5 1E-07 3.5E-12 86.6 6.4 101 104-220 104-204 (253)
267 2okc_A Type I restriction enzy 98.5 6.2E-08 2.1E-12 95.6 4.9 111 106-221 172-306 (445)
268 3khk_A Type I restriction-modi 98.5 1.2E-07 4.1E-12 96.0 7.1 143 104-250 243-423 (544)
269 1qam_A ERMC' methyltransferase 98.5 3.1E-07 1.1E-11 83.4 9.1 75 104-187 29-103 (244)
270 2zfu_A Nucleomethylin, cerebra 98.5 1.1E-07 3.8E-12 83.5 5.6 125 104-270 66-191 (215)
271 3ftd_A Dimethyladenosine trans 98.5 5.5E-07 1.9E-11 82.2 9.6 100 104-222 30-131 (249)
272 2h1r_A Dimethyladenosine trans 98.4 1.9E-07 6.3E-12 87.5 5.8 76 104-188 41-116 (299)
273 3lkd_A Type I restriction-modi 98.4 1.7E-06 5.8E-11 87.5 12.5 140 105-248 221-383 (542)
274 1zg3_A Isoflavanone 4'-O-methy 98.4 3E-07 1E-11 87.7 6.3 97 105-221 193-292 (358)
275 4gqb_A Protein arginine N-meth 98.3 4E-07 1.4E-11 93.4 6.3 103 106-219 358-464 (637)
276 2ar0_A M.ecoki, type I restric 98.3 4.4E-07 1.5E-11 91.9 6.4 139 106-246 170-335 (541)
277 3s1s_A Restriction endonucleas 98.3 6.4E-07 2.2E-11 93.5 7.2 145 105-250 321-493 (878)
278 3ua3_A Protein arginine N-meth 98.3 1.8E-06 6.2E-11 88.9 10.1 122 90-220 391-532 (745)
279 2wk1_A NOVP; transferase, O-me 98.3 1.2E-06 4.1E-11 81.5 7.7 107 104-221 105-243 (282)
280 4fzv_A Putative methyltransfer 98.3 3.7E-06 1.3E-10 80.8 11.3 120 105-225 148-287 (359)
281 3v97_A Ribosomal RNA large sub 98.3 7.2E-07 2.5E-11 93.0 6.3 111 105-221 190-346 (703)
282 1qyr_A KSGA, high level kasuga 98.2 1.2E-06 4E-11 80.2 5.4 76 105-188 21-100 (252)
283 3uzu_A Ribosomal RNA small sub 98.2 1.8E-06 6.3E-11 80.1 6.7 76 104-187 41-123 (279)
284 2ld4_A Anamorsin; methyltransf 98.2 1.3E-06 4.5E-11 74.3 4.4 112 104-245 11-127 (176)
285 3evf_A RNA-directed RNA polyme 98.0 4.4E-06 1.5E-10 77.0 5.1 149 104-270 73-227 (277)
286 1yub_A Ermam, rRNA methyltrans 98.0 2.4E-07 8.1E-12 83.9 -4.3 76 104-188 28-103 (245)
287 3ps9_A TRNA 5-methylaminomethy 98.0 5.7E-05 1.9E-09 78.0 12.9 145 106-268 67-251 (676)
288 3pvc_A TRNA 5-methylaminomethy 97.9 4.3E-05 1.5E-09 79.1 10.7 131 105-249 58-228 (689)
289 1wg8_A Predicted S-adenosylmet 97.9 4.2E-05 1.4E-09 70.8 9.1 73 105-187 22-98 (285)
290 3gcz_A Polyprotein; flavivirus 97.8 3.1E-06 1.1E-10 78.1 0.5 161 105-285 90-264 (282)
291 3eld_A Methyltransferase; flav 97.7 3.9E-05 1.3E-09 71.3 5.5 165 104-285 80-254 (300)
292 3r24_A NSP16, 2'-O-methyl tran 97.5 0.00056 1.9E-08 63.4 11.0 150 89-268 91-255 (344)
293 3tka_A Ribosomal RNA small sub 97.4 0.00026 8.8E-09 67.1 7.2 75 105-187 57-137 (347)
294 1g55_A DNA cytosine methyltran 97.4 0.0013 4.3E-08 62.6 11.5 150 106-271 2-170 (343)
295 3ufb_A Type I restriction-modi 97.2 0.00028 9.6E-09 71.1 5.9 135 106-246 218-385 (530)
296 3p8z_A Mtase, non-structural p 97.2 0.0013 4.4E-08 59.3 8.8 132 105-251 78-211 (267)
297 2px2_A Genome polyprotein [con 97.2 0.00072 2.5E-08 61.6 7.2 130 104-250 72-207 (269)
298 1i4w_A Mitochondrial replicati 97.2 0.00045 1.5E-08 66.1 6.0 59 106-171 59-117 (353)
299 2c7p_A Modification methylase 97.1 0.0065 2.2E-07 57.3 13.8 148 106-270 11-173 (327)
300 3g7u_A Cytosine-specific methy 97.0 0.01 3.5E-07 57.0 13.9 148 107-270 3-172 (376)
301 2k4m_A TR8_protein, UPF0146 pr 96.9 0.00025 8.5E-09 59.3 1.4 64 104-187 34-99 (153)
302 2efj_A 3,7-dimethylxanthine me 96.7 0.0052 1.8E-07 59.3 8.9 111 106-223 53-226 (384)
303 3lkz_A Non-structural protein 96.7 0.0014 4.8E-08 60.8 4.6 133 105-251 94-229 (321)
304 2zig_A TTHA0409, putative modi 96.6 0.003 1E-07 58.5 6.7 46 104-151 234-279 (297)
305 3b5i_A S-adenosyl-L-methionine 96.5 0.0091 3.1E-07 57.4 9.2 119 104-223 51-226 (374)
306 3s2e_A Zinc-containing alcohol 96.4 0.0087 3E-07 56.1 8.7 98 104-222 165-263 (340)
307 1pl8_A Human sorbitol dehydrog 96.4 0.035 1.2E-06 52.3 12.6 95 104-221 170-272 (356)
308 3ubt_Y Modification methylase 96.3 0.039 1.3E-06 51.3 12.4 147 108-270 2-163 (331)
309 4h0n_A DNMT2; SAH binding, tra 96.3 0.062 2.1E-06 50.7 13.8 149 107-271 4-170 (333)
310 1f8f_A Benzyl alcohol dehydrog 96.3 0.023 7.7E-07 53.9 10.8 98 104-221 189-288 (371)
311 3m6i_A L-arabinitol 4-dehydrog 96.3 0.025 8.5E-07 53.4 10.9 98 104-222 178-283 (363)
312 3tos_A CALS11; methyltransfera 96.2 0.033 1.1E-06 50.7 10.7 107 104-221 68-216 (257)
313 4auk_A Ribosomal RNA large sub 96.0 0.0042 1.4E-07 59.6 3.9 71 104-188 210-280 (375)
314 4ej6_A Putative zinc-binding d 96.0 0.028 9.6E-07 53.4 9.6 99 104-222 181-284 (370)
315 3fpc_A NADP-dependent alcohol 95.9 0.01 3.5E-07 55.9 6.3 98 104-221 165-265 (352)
316 3qv2_A 5-cytosine DNA methyltr 95.8 0.093 3.2E-06 49.4 12.2 150 105-271 9-181 (327)
317 3jv7_A ADH-A; dehydrogenase, n 95.7 0.028 9.7E-07 52.6 8.6 97 104-221 170-269 (345)
318 1m6e_X S-adenosyl-L-methionnin 95.7 0.006 2E-07 58.4 3.6 115 104-222 50-209 (359)
319 1uuf_A YAHK, zinc-type alcohol 95.6 0.033 1.1E-06 52.9 8.6 94 104-221 193-287 (369)
320 1e3j_A NADP(H)-dependent ketos 95.5 0.1 3.5E-06 48.9 11.4 97 104-221 167-270 (352)
321 1cdo_A Alcohol dehydrogenase; 95.4 0.089 3.1E-06 49.8 10.8 99 105-221 192-293 (374)
322 3uko_A Alcohol dehydrogenase c 95.4 0.055 1.9E-06 51.4 9.4 101 104-222 192-295 (378)
323 2b5w_A Glucose dehydrogenase; 95.4 0.045 1.5E-06 51.6 8.7 94 107-222 174-273 (357)
324 1p0f_A NADP-dependent alcohol 95.3 0.093 3.2E-06 49.6 10.4 99 105-221 191-292 (373)
325 1e3i_A Alcohol dehydrogenase, 95.3 0.11 3.7E-06 49.2 10.9 99 105-221 195-296 (376)
326 4eez_A Alcohol dehydrogenase 1 95.2 0.079 2.7E-06 49.4 9.7 99 104-222 162-263 (348)
327 3uog_A Alcohol dehydrogenase; 95.2 0.085 2.9E-06 49.8 10.0 93 105-222 189-287 (363)
328 1g60_A Adenine-specific methyl 95.2 0.028 9.5E-07 50.8 6.3 46 104-151 211-256 (260)
329 1pjc_A Protein (L-alanine dehy 95.2 0.18 6E-06 47.9 12.0 99 105-220 166-265 (361)
330 2fzw_A Alcohol dehydrogenase c 95.2 0.11 3.7E-06 49.1 10.5 99 105-221 190-291 (373)
331 2jhf_A Alcohol dehydrogenase E 95.2 0.097 3.3E-06 49.5 10.2 99 105-221 191-292 (374)
332 1vj0_A Alcohol dehydrogenase, 95.1 0.084 2.9E-06 50.2 9.7 94 105-221 195-297 (380)
333 2dph_A Formaldehyde dismutase; 95.1 0.063 2.2E-06 51.4 8.9 109 104-221 184-298 (398)
334 3ip1_A Alcohol dehydrogenase, 95.1 0.1 3.5E-06 50.0 10.3 99 105-222 213-318 (404)
335 1boo_A Protein (N-4 cytosine-s 95.0 0.021 7.3E-07 53.5 5.1 67 157-224 11-86 (323)
336 1kol_A Formaldehyde dehydrogen 94.9 0.11 3.8E-06 49.5 9.8 107 105-221 185-299 (398)
337 1g60_A Adenine-specific methyl 94.9 0.023 7.9E-07 51.4 4.6 62 160-222 4-74 (260)
338 2d8a_A PH0655, probable L-thre 94.8 0.081 2.8E-06 49.6 8.4 97 105-221 167-266 (348)
339 3swr_A DNA (cytosine-5)-methyl 94.8 0.81 2.8E-05 49.2 17.0 152 106-270 540-722 (1002)
340 4a2c_A Galactitol-1-phosphate 94.7 0.089 3E-06 49.0 8.5 99 104-222 159-260 (346)
341 3two_A Mannitol dehydrogenase; 94.7 0.053 1.8E-06 50.8 6.9 90 104-222 175-265 (348)
342 3fwz_A Inner membrane protein 94.6 0.19 6.3E-06 40.6 9.1 95 106-222 7-105 (140)
343 2h6e_A ADH-4, D-arabinose 1-de 94.5 0.093 3.2E-06 49.0 8.2 93 105-221 170-268 (344)
344 2dq4_A L-threonine 3-dehydroge 94.4 0.057 2E-06 50.5 6.4 96 105-221 164-261 (343)
345 3ggo_A Prephenate dehydrogenas 94.4 0.49 1.7E-05 43.9 12.7 90 106-220 33-126 (314)
346 1rjw_A ADH-HT, alcohol dehydro 94.4 0.13 4.4E-06 48.0 8.8 97 104-221 163-260 (339)
347 3me5_A Cytosine-specific methy 94.4 0.073 2.5E-06 52.8 7.3 128 106-245 88-251 (482)
348 1piw_A Hypothetical zinc-type 94.3 0.052 1.8E-06 51.2 5.9 94 104-221 178-275 (360)
349 2vhw_A Alanine dehydrogenase; 94.3 0.34 1.2E-05 46.2 11.7 97 105-222 167-267 (377)
350 2zig_A TTHA0409, putative modi 94.3 0.05 1.7E-06 50.1 5.5 65 158-223 19-98 (297)
351 4dvj_A Putative zinc-dependent 94.3 0.12 4E-06 49.0 8.2 95 106-221 172-269 (363)
352 3p2y_A Alanine dehydrogenase/p 94.1 0.18 6.1E-06 48.5 9.2 106 105-219 183-299 (381)
353 1eg2_A Modification methylase 94.1 0.048 1.6E-06 51.1 5.0 66 158-224 36-108 (319)
354 1pqw_A Polyketide synthase; ro 93.8 0.25 8.7E-06 41.9 8.8 96 104-221 37-136 (198)
355 2qrv_A DNA (cytosine-5)-methyl 93.8 0.09 3.1E-06 48.7 6.2 74 104-187 14-92 (295)
356 2cdc_A Glucose dehydrogenase g 93.7 0.16 5.3E-06 48.0 7.8 92 106-221 181-277 (366)
357 2hcy_A Alcohol dehydrogenase 1 93.6 0.39 1.3E-05 44.8 10.5 96 105-221 169-268 (347)
358 1iz0_A Quinone oxidoreductase; 93.6 0.23 8E-06 45.3 8.7 91 104-221 124-217 (302)
359 2cf5_A Atccad5, CAD, cinnamyl 93.6 0.11 3.7E-06 49.0 6.5 94 105-221 180-274 (357)
360 3iht_A S-adenosyl-L-methionine 93.6 0.11 3.7E-06 43.7 5.6 109 98-220 33-145 (174)
361 1yqd_A Sinapyl alcohol dehydro 93.5 0.15 5.1E-06 48.2 7.4 93 105-221 187-281 (366)
362 4b7c_A Probable oxidoreductase 93.4 0.16 5.4E-06 47.2 7.2 97 104-221 148-247 (336)
363 3goh_A Alcohol dehydrogenase, 93.3 0.08 2.7E-06 48.8 5.1 87 104-221 141-228 (315)
364 4dio_A NAD(P) transhydrogenase 93.3 0.23 7.9E-06 48.1 8.4 106 105-219 189-309 (405)
365 1v3u_A Leukotriene B4 12- hydr 93.2 0.64 2.2E-05 42.9 11.2 95 105-221 145-243 (333)
366 1jvb_A NAD(H)-dependent alcoho 93.2 0.31 1.1E-05 45.4 9.0 97 104-221 169-270 (347)
367 3qwb_A Probable quinone oxidor 93.2 0.26 8.9E-06 45.7 8.4 97 104-222 147-247 (334)
368 4eye_A Probable oxidoreductase 93.0 0.23 7.8E-06 46.4 7.7 95 104-221 158-256 (342)
369 3fbg_A Putative arginate lyase 93.0 0.24 8.2E-06 46.3 7.8 96 105-222 150-248 (346)
370 2eez_A Alanine dehydrogenase; 92.9 0.58 2E-05 44.3 10.6 101 105-223 165-266 (369)
371 1x13_A NAD(P) transhydrogenase 92.9 0.33 1.1E-05 46.8 8.8 43 105-148 171-214 (401)
372 3jyn_A Quinone oxidoreductase; 92.7 0.13 4.5E-06 47.6 5.6 96 105-222 140-239 (325)
373 1l7d_A Nicotinamide nucleotide 92.7 0.35 1.2E-05 46.2 8.7 42 105-147 171-213 (384)
374 3gms_A Putative NADPH:quinone 92.5 0.12 4.1E-06 48.2 5.0 97 104-222 143-243 (340)
375 3av4_A DNA (cytosine-5)-methyl 92.4 4 0.00014 45.2 17.4 151 106-269 851-1032(1330)
376 3dfz_A SIRC, precorrin-2 dehyd 92.4 0.45 1.5E-05 42.2 8.3 81 93-189 18-102 (223)
377 2eih_A Alcohol dehydrogenase; 91.9 0.61 2.1E-05 43.3 9.2 96 105-222 166-265 (343)
378 1wly_A CAAR, 2-haloacrylate re 91.9 0.27 9.3E-06 45.5 6.7 96 105-222 145-244 (333)
379 2py6_A Methyltransferase FKBM; 91.9 0.3 1E-05 47.2 7.1 48 104-151 225-274 (409)
380 2j3h_A NADP-dependent oxidored 91.6 0.27 9.4E-06 45.6 6.4 96 105-221 155-254 (345)
381 4dup_A Quinone oxidoreductase; 91.6 0.33 1.1E-05 45.4 7.0 96 105-222 167-265 (353)
382 4ft4_B DNA (cytosine-5)-methyl 91.6 4 0.00014 42.4 15.8 44 107-150 213-261 (784)
383 3l9w_A Glutathione-regulated p 91.6 0.43 1.5E-05 46.2 7.8 94 106-221 4-101 (413)
384 2zb4_A Prostaglandin reductase 91.6 0.31 1.1E-05 45.6 6.7 95 107-221 162-259 (357)
385 2c0c_A Zinc binding alcohol de 91.3 0.68 2.3E-05 43.5 8.8 96 104-221 162-260 (362)
386 2g1u_A Hypothetical protein TM 91.0 0.54 1.9E-05 38.4 6.9 74 104-188 17-94 (155)
387 4a7p_A UDP-glucose dehydrogena 90.9 1.5 5.2E-05 42.8 11.1 140 106-258 8-160 (446)
388 1qor_A Quinone oxidoreductase; 90.9 0.23 7.8E-06 45.9 5.0 96 105-222 140-239 (327)
389 2j8z_A Quinone oxidoreductase; 90.8 0.62 2.1E-05 43.6 8.0 96 105-222 162-261 (354)
390 1boo_A Protein (N-4 cytosine-s 90.4 0.15 5.2E-06 47.6 3.3 62 104-172 251-312 (323)
391 3gaz_A Alcohol dehydrogenase s 90.4 0.61 2.1E-05 43.4 7.5 94 104-222 149-246 (343)
392 3qsg_A NAD-binding phosphogluc 90.3 9.2 0.00032 34.9 15.5 113 106-250 24-140 (312)
393 3c85_A Putative glutathione-re 90.3 1.1 3.9E-05 37.3 8.5 95 106-222 39-139 (183)
394 1jw9_B Molybdopterin biosynthe 90.3 0.57 2E-05 41.9 6.9 34 106-139 31-65 (249)
395 3ado_A Lambda-crystallin; L-gu 90.2 1.1 3.8E-05 41.8 9.0 106 104-224 4-125 (319)
396 1zcj_A Peroxisomal bifunctiona 90.1 1.3 4.6E-05 43.2 10.0 103 106-224 37-152 (463)
397 3gt0_A Pyrroline-5-carboxylate 90.0 3 0.0001 36.7 11.4 90 107-221 3-96 (247)
398 2vn8_A Reticulon-4-interacting 89.8 0.7 2.4E-05 43.5 7.5 95 105-221 183-279 (375)
399 3h8v_A Ubiquitin-like modifier 89.8 0.47 1.6E-05 43.8 6.0 34 106-139 36-70 (292)
400 1lss_A TRK system potassium up 89.5 3.8 0.00013 31.8 10.7 70 107-188 5-79 (140)
401 3k96_A Glycerol-3-phosphate de 89.5 3.2 0.00011 39.0 11.8 130 106-258 29-164 (356)
402 3tqh_A Quinone oxidoreductase; 89.4 1.2 3.9E-05 41.0 8.4 92 104-221 151-244 (321)
403 3gqv_A Enoyl reductase; medium 89.3 0.84 2.9E-05 43.0 7.6 96 104-221 163-262 (371)
404 1yb5_A Quinone oxidoreductase; 89.3 0.25 8.7E-06 46.3 3.9 95 105-221 170-268 (351)
405 2hwk_A Helicase NSP2; rossman 89.0 0.95 3.2E-05 41.6 7.2 98 177-284 205-314 (320)
406 4e12_A Diketoreductase; oxidor 89.0 0.97 3.3E-05 40.9 7.5 103 106-223 4-122 (283)
407 2y0c_A BCEC, UDP-glucose dehyd 89.0 3 0.0001 41.0 11.5 111 105-223 7-129 (478)
408 4a0s_A Octenoyl-COA reductase/ 88.8 1.8 6.1E-05 41.8 9.7 44 104-148 219-264 (447)
409 3ic5_A Putative saccharopine d 88.8 2.3 8E-05 32.0 8.6 70 106-187 5-78 (118)
410 3llv_A Exopolyphosphatase-rela 88.4 2.5 8.5E-05 33.5 8.9 69 107-188 7-80 (141)
411 1f0y_A HCDH, L-3-hydroxyacyl-C 88.2 2.4 8.2E-05 38.5 9.7 102 106-222 15-136 (302)
412 1xa0_A Putative NADPH dependen 88.2 0.87 3E-05 41.9 6.7 91 108-221 152-245 (328)
413 3hdj_A Probable ornithine cycl 88.1 3 0.0001 38.6 10.4 111 62-188 80-193 (313)
414 3gg2_A Sugar dehydrogenase, UD 88.0 4.3 0.00015 39.5 11.8 109 107-223 3-123 (450)
415 1id1_A Putative potassium chan 87.9 2.9 9.8E-05 33.7 9.1 97 106-222 3-105 (153)
416 2o3j_A UDP-glucose 6-dehydroge 87.4 6.6 0.00023 38.4 12.9 110 107-222 10-135 (481)
417 3vh1_A Ubiquitin-like modifier 87.3 0.8 2.7E-05 46.4 6.2 33 106-138 327-360 (598)
418 3nx4_A Putative oxidoreductase 87.2 0.6 2.1E-05 42.8 5.0 89 108-221 149-240 (324)
419 2dpo_A L-gulonate 3-dehydrogen 87.0 1.3 4.5E-05 41.2 7.2 103 106-223 6-124 (319)
420 1zud_1 Adenylyltransferase THI 87.0 1.2 4E-05 40.0 6.6 33 106-138 28-61 (251)
421 1bg6_A N-(1-D-carboxylethyl)-L 86.5 3.8 0.00013 37.7 10.2 98 107-220 5-107 (359)
422 3tri_A Pyrroline-5-carboxylate 86.2 5.8 0.0002 35.8 11.0 89 107-220 4-96 (280)
423 2g5c_A Prephenate dehydrogenas 86.2 2.4 8.3E-05 37.9 8.3 89 107-220 2-94 (281)
424 2gn4_A FLAA1 protein, UDP-GLCN 86.0 2.6 8.9E-05 39.0 8.8 76 105-188 20-101 (344)
425 3krt_A Crotonyl COA reductase; 85.9 2.4 8.1E-05 41.1 8.7 102 105-221 228-343 (456)
426 4a27_A Synaptic vesicle membra 85.7 1.1 3.6E-05 41.9 5.8 95 104-222 141-238 (349)
427 3rui_A Ubiquitin-like modifier 85.6 1.3 4.5E-05 41.7 6.4 34 106-139 34-68 (340)
428 3ce6_A Adenosylhomocysteinase; 85.3 5.6 0.00019 39.3 11.0 90 104-224 272-362 (494)
429 2q3e_A UDP-glucose 6-dehydroge 85.3 10 0.00034 36.9 12.9 108 107-220 6-129 (467)
430 3ktd_A Prephenate dehydrogenas 85.1 1.7 5.9E-05 40.8 7.0 95 104-224 6-102 (341)
431 3d0o_A L-LDH 1, L-lactate dehy 84.9 19 0.00064 33.1 14.0 112 105-225 5-125 (317)
432 3b1f_A Putative prephenate deh 84.9 2.4 8.4E-05 38.0 7.7 90 106-219 6-98 (290)
433 3o8q_A Shikimate 5-dehydrogena 84.8 12 0.00042 33.8 12.5 98 78-189 100-198 (281)
434 3ijr_A Oxidoreductase, short c 84.6 16 0.00054 32.7 13.2 77 105-187 46-134 (291)
435 1h2b_A Alcohol dehydrogenase; 84.6 4 0.00014 38.0 9.3 93 105-221 186-284 (359)
436 3zwc_A Peroxisomal bifunctiona 84.4 2.8 9.5E-05 43.7 8.7 104 107-224 317-431 (742)
437 1zej_A HBD-9, 3-hydroxyacyl-CO 84.2 3.9 0.00013 37.5 8.9 97 104-223 10-108 (293)
438 3l4b_C TRKA K+ channel protien 84.0 4 0.00014 35.0 8.5 93 108-222 2-99 (218)
439 3t4e_A Quinate/shikimate dehyd 84.0 8 0.00027 35.8 10.9 105 77-187 121-229 (312)
440 4dkj_A Cytosine-specific methy 84.0 5.2 0.00018 38.4 9.9 159 107-270 11-238 (403)
441 4g65_A TRK system potassium up 83.9 7.1 0.00024 38.0 11.1 74 104-188 233-310 (461)
442 3hwr_A 2-dehydropantoate 2-red 83.4 2.4 8.1E-05 39.0 7.1 97 105-220 18-118 (318)
443 1eg2_A Modification methylase 83.4 1.2 4.2E-05 41.4 5.1 46 104-151 241-289 (319)
444 3mog_A Probable 3-hydroxybutyr 83.4 2.6 9.1E-05 41.5 7.7 102 106-223 5-121 (483)
445 3h7a_A Short chain dehydrogena 83.2 5.6 0.00019 34.9 9.3 75 105-187 6-92 (252)
446 3d4o_A Dipicolinate synthase s 83.0 12 0.00041 33.8 11.6 89 105-223 154-244 (293)
447 3oj0_A Glutr, glutamyl-tRNA re 82.9 10 0.00035 30.0 10.0 66 106-189 21-91 (144)
448 3tnl_A Shikimate dehydrogenase 82.7 11 0.00039 34.7 11.4 105 77-187 127-235 (315)
449 3f1l_A Uncharacterized oxidore 82.6 18 0.00062 31.4 12.4 78 105-187 11-101 (252)
450 4gsl_A Ubiquitin-like modifier 82.5 1.9 6.5E-05 43.8 6.4 34 106-139 326-360 (615)
451 3o26_A Salutaridine reductase; 82.5 3.1 0.00011 37.2 7.4 77 105-187 11-100 (311)
452 3pqe_A L-LDH, L-lactate dehydr 82.3 14 0.00047 34.4 11.9 80 105-190 4-85 (326)
453 2aef_A Calcium-gated potassium 82.0 5.3 0.00018 34.5 8.5 93 106-223 9-106 (234)
454 3lyl_A 3-oxoacyl-(acyl-carrier 81.9 8.6 0.0003 33.2 9.9 76 105-187 4-91 (247)
455 3i1j_A Oxidoreductase, short c 81.8 13 0.00045 32.0 11.1 78 105-187 13-103 (247)
456 1ldn_A L-lactate dehydrogenase 81.7 18 0.00062 33.1 12.5 111 105-225 5-125 (316)
457 3qiv_A Short-chain dehydrogena 81.4 5.5 0.00019 34.6 8.5 76 105-187 8-95 (253)
458 3cea_A MYO-inositol 2-dehydrog 80.9 12 0.00043 34.1 11.1 72 105-188 7-81 (346)
459 1mv8_A GMD, GDP-mannose 6-dehy 80.8 14 0.00048 35.4 11.8 105 108-220 2-121 (436)
460 2rir_A Dipicolinate synthase, 80.5 12 0.0004 34.0 10.6 89 105-223 156-246 (300)
461 3jyo_A Quinate/shikimate dehyd 80.4 3.4 0.00012 37.7 6.8 101 78-187 101-203 (283)
462 3i83_A 2-dehydropantoate 2-red 80.4 3 0.0001 38.3 6.6 94 107-220 3-103 (320)
463 3vku_A L-LDH, L-lactate dehydr 80.3 25 0.00085 32.6 12.9 110 103-221 6-124 (326)
464 1a5z_A L-lactate dehydrogenase 80.2 14 0.00047 34.0 11.0 104 108-220 2-114 (319)
465 1wma_A Carbonyl reductase [NAD 80.1 4.1 0.00014 35.5 7.2 77 105-187 3-91 (276)
466 2izz_A Pyrroline-5-carboxylate 79.8 36 0.0012 31.0 15.1 87 107-220 23-116 (322)
467 3tum_A Shikimate dehydrogenase 79.8 14 0.00047 33.3 10.7 69 74-144 93-164 (269)
468 4g65_A TRK system potassium up 79.3 5.7 0.0002 38.7 8.5 67 107-185 4-75 (461)
469 1hyh_A L-hicdh, L-2-hydroxyiso 79.3 17 0.00058 33.0 11.3 77 107-189 2-80 (309)
470 3vrd_B FCCB subunit, flavocyto 79.3 1.6 5.4E-05 41.1 4.3 34 106-139 2-37 (401)
471 1tt7_A YHFP; alcohol dehydroge 78.9 1 3.6E-05 41.4 2.9 89 108-221 153-246 (330)
472 1gu7_A Enoyl-[acyl-carrier-pro 78.9 7.7 0.00027 35.9 9.0 91 107-222 169-275 (364)
473 2vz8_A Fatty acid synthase; tr 78.9 0.24 8.3E-06 58.3 -1.8 88 108-220 1243-1346(2512)
474 1zkd_A DUF185; NESG, RPR58, st 78.8 1.9 6.3E-05 41.4 4.6 60 90-149 60-131 (387)
475 3sju_A Keto reductase; short-c 78.8 11 0.00039 33.4 9.8 76 105-187 23-110 (279)
476 3rkr_A Short chain oxidoreduct 78.7 17 0.00059 31.8 10.9 78 105-188 28-116 (262)
477 3h2s_A Putative NADH-flavin re 78.7 8.9 0.0003 32.3 8.7 69 108-188 2-72 (224)
478 3sx2_A Putative 3-ketoacyl-(ac 78.6 12 0.00042 32.9 10.0 76 105-187 12-111 (278)
479 3oig_A Enoyl-[acyl-carrier-pro 78.6 31 0.001 30.0 12.5 77 105-187 6-96 (266)
480 4e21_A 6-phosphogluconate dehy 78.5 23 0.00079 33.2 12.2 109 106-244 22-132 (358)
481 3ucx_A Short chain dehydrogena 78.4 31 0.0011 30.1 12.6 76 105-187 10-97 (264)
482 3pid_A UDP-glucose 6-dehydroge 78.1 24 0.0008 34.2 12.4 109 106-223 36-154 (432)
483 1y8q_A Ubiquitin-like 1 activa 78.1 2.4 8E-05 39.9 5.1 54 86-139 14-70 (346)
484 3q2i_A Dehydrogenase; rossmann 78.0 23 0.00079 32.6 12.0 71 105-188 12-85 (354)
485 2f1k_A Prephenate dehydrogenas 78.0 6.2 0.00021 35.0 7.7 87 108-222 2-90 (279)
486 3eod_A Protein HNR; response r 78.0 19 0.00066 26.9 9.8 77 129-220 7-85 (130)
487 3c7a_A Octopine dehydrogenase; 77.8 13 0.00043 35.1 10.3 100 108-221 4-115 (404)
488 2ew2_A 2-dehydropantoate 2-red 77.8 11 0.00037 33.7 9.4 99 107-221 4-107 (316)
489 3e8x_A Putative NAD-dependent 77.7 2.9 9.8E-05 36.1 5.2 71 105-187 20-93 (236)
490 3tjr_A Short chain dehydrogena 77.7 10 0.00035 34.2 9.3 76 105-187 30-117 (301)
491 2v6b_A L-LDH, L-lactate dehydr 77.6 18 0.00061 32.9 10.9 104 108-220 2-114 (304)
492 2zyd_A 6-phosphogluconate dehy 77.1 16 0.00055 35.7 11.0 98 105-223 14-113 (480)
493 3abi_A Putative uncharacterize 77.0 3.3 0.00011 38.8 5.8 69 105-187 15-86 (365)
494 3jtm_A Formate dehydrogenase, 77.0 24 0.00082 33.0 11.8 108 105-243 163-272 (351)
495 3ioy_A Short-chain dehydrogena 76.8 14 0.00047 33.7 9.9 78 105-187 7-96 (319)
496 2hjr_A Malate dehydrogenase; m 76.8 18 0.0006 33.5 10.7 107 106-220 14-129 (328)
497 1tt5_B Ubiquitin-activating en 76.7 4.1 0.00014 39.6 6.5 34 106-139 40-74 (434)
498 3ojo_A CAP5O; rossmann fold, c 76.6 17 0.00057 35.2 10.8 107 105-223 10-130 (431)
499 1zsy_A Mitochondrial 2-enoyl t 76.6 3.3 0.00011 38.5 5.7 44 105-148 167-215 (357)
500 3r3s_A Oxidoreductase; structu 76.6 32 0.0011 30.7 12.2 78 105-188 48-138 (294)
No 1
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=100.00 E-value=8.8e-65 Score=476.38 Aligned_cols=280 Identities=33% Similarity=0.601 Sum_probs=255.1
Q ss_pred cCCCeEEEEeCcccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCCCCeE
Q 019550 30 QDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTV 109 (339)
Q Consensus 30 ~~~~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~V 109 (339)
....|++ ...++.++.|+++++||+++|+||+|.|++++.+||+|+|||.+|++++||+.|||||+|+|++.|++|++|
T Consensus 9 ~~~~w~e-~~~~~~~~~~~v~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~pk~V 87 (294)
T 3o4f_A 9 EKKQWHE-TLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHV 87 (294)
T ss_dssp -CEEEEC-CSSSSEEEEEEESEEEEEEC---CCEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEE
T ss_pred cccceee-eccCCcceEEEEeeEEEeccCCCceEEEEEcCCcceEEEECCchhhccccHHHHHHHHHHHHHhhCCCCCeE
Confidence 4457984 467888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhh-hccccCCCCeEEEEccHHHHHHhcCCceeEEEecCCC
Q 019550 110 FIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTV-NQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLAD 188 (339)
Q Consensus 110 L~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~-~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~d 188 (339)
|+||+|+|++++++++|++..+|++|||||+|+++||+||+. +..++++||++++++||++|++...++||+||+|++|
T Consensus 88 LIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~d 167 (294)
T 3o4f_A 88 LIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTD 167 (294)
T ss_dssp EEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCC
T ss_pred EEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCCC
Confidence 999999999999999999999999999999999999999974 5567889999999999999999888999999999999
Q ss_pred CCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeeccc-CCceeEEEE
Q 019550 189 PVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF-ADTWGWVMA 267 (339)
Q Consensus 189 ~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~-~~~~~~~~a 267 (339)
|. +++..|||.+||+. ++++|+|||++++|+++| +...+.+..+.++++++|++|..|.+.+|+| ++.|+|++|
T Consensus 168 p~--~~~~~L~t~eFy~~-~~~~L~p~Gv~v~q~~sp--~~~~~~~~~~~~~l~~~F~~v~~~~~~vPty~~g~w~f~~a 242 (294)
T 3o4f_A 168 PI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGVC--FLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWA 242 (294)
T ss_dssp CC--CTTCCSSCCHHHHH-HHHTEEEEEEEEEEEEES--SSCCHHHHHHHHHHHHHCSEEEEEEECCTTSSSSCEEEEEE
T ss_pred cC--CCchhhcCHHHHHH-HHHHhCCCCEEEEecCCc--ccChHHHHHHHHHHHhhCCceeeeeeeeccCCCcceeheeE
Confidence 97 77889999999999 899999999999999988 5567788999999999999999999999999 578999999
Q ss_pred ecCC--CCCCHHHHHHHHHhcCcccccccCHHhhHHhccCCHHHHHhhcCC
Q 019550 268 SDQP--FSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNE 316 (339)
Q Consensus 268 s~~p--~~~~~~~l~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~~~ 316 (339)
|+.+ ..++.+.+.+|+..+ ..+++|||+++|+++|+||+|++++|+++
T Consensus 243 s~~~~~~~~~~~~~~~~~~~~-~~~~~yyn~~~h~aaF~lP~~~~~~l~~e 292 (294)
T 3o4f_A 243 TDNDALRHLSTEIIQARFLAS-GLKCRYYNPAIHTAAFALPQYLQDALASQ 292 (294)
T ss_dssp ESCTTGGGCCHHHHHHHHHSS-CCCCSSCCHHHHHHHTCCCHHHHHHTTSS
T ss_pred ECCCccccCChHHHhHHHHhh-CCCceEECHHHHHHHccCcHHHHHHHhcC
Confidence 9875 346778888888765 34799999999999999999999999875
No 2
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=100.00 E-value=2.5e-54 Score=411.37 Aligned_cols=304 Identities=38% Similarity=0.620 Sum_probs=270.7
Q ss_pred cCCCeEEEEeCcccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCCCCeE
Q 019550 30 QDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTV 109 (339)
Q Consensus 30 ~~~~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~V 109 (339)
.++.||+|..+++..++++++++|++.+|+||+|.|++++.+|+.|++||..|+++.+++.|+++++|++++.++++++|
T Consensus 2 ~~~~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~V 81 (314)
T 1uir_A 2 DYGMYFFEHVTPYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRV 81 (314)
T ss_dssp CSSCEEEEESSSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEE
T ss_pred CCCceEEEEcCCCcEEEEecceEEEEEECCCCCEEEEEcCCCcEEEEECCEEeeeecchhHHHHHHHHHHHhcCCCCCeE
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred EEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhh-hccccCCCCeEEEEccHHHHHHhcCCceeEEEecCCC
Q 019550 110 FIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTV-NQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLAD 188 (339)
Q Consensus 110 L~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~-~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~d 188 (339)
|+||||+|.++++++++.+..+|++||+|+.+++.|+++++. +...+++++++++.+|+++++....++||+|++|+++
T Consensus 82 LdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~ 161 (314)
T 1uir_A 82 LIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTD 161 (314)
T ss_dssp EEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCC
T ss_pred EEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEECCCC
Confidence 999999999999999987788999999999999999999864 2222457999999999999998777899999999998
Q ss_pred CC-CCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeecccCCceeEEEE
Q 019550 189 PV-EGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMA 267 (339)
Q Consensus 189 ~~-~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~~~~~~~~a 267 (339)
+. ..++...|++.+||+. ++++|+|||+++++.+++.. ...+.++.+.++++++|+++..+.+.+|+|++.|+|++|
T Consensus 162 ~~~~~~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~~~-~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g~~~~~~a 239 (314)
T 1uir_A 162 PVGEDNPARLLYTVEFYRL-VKAHLNPGGVMGMQTGMILL-THHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLA 239 (314)
T ss_dssp CBSTTCGGGGGSSHHHHHH-HHHTEEEEEEEEEEEEEECC----CHHHHHHHHHHTTCSEEEEEEEEEGGGTEEEEEEEE
T ss_pred cccccCcchhccHHHHHHH-HHHhcCCCcEEEEEccCccc-cCHHHHHHHHHHHHHHCCceEEEEEecCCCCCeEEEEEE
Confidence 75 2245678889999999 89999999999999876520 345678899999999999999999999999878999999
Q ss_pred ecC--CCCCCHHHHHHHHHhcCcccccccCHHhhHHhccCCHHHHHhhcCCCccccccccccccccccccc
Q 019550 268 SDQ--PFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFIHGHGVAYN 336 (339)
Q Consensus 268 s~~--p~~~~~~~l~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 336 (339)
|+. |..++++.+.+|++.+. .+++|||+++|+++|+||+++++.++.+++++|+++|+++.+.|.++.
T Consensus 240 s~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~f~lp~~~~~~~~~~~~~~t~~~p~~~~~~~~~~~ 309 (314)
T 1uir_A 240 SDAFDPAAFSEGVIEARIRERN-LALRHLTAPYLEAMFVLPKDLLEALEKETMVSTDQNPFYVTPEGEARQ 309 (314)
T ss_dssp ESSSCTTCCCTTHHHHHHHHTT-CCCSSCCHHHHHHTTCCCHHHHHHHHHCCCCCCSSSCEEECTTSCEEE
T ss_pred ECCCCcccCCHHHHHHHhhccc-cCccccCHHHHHHHcCCCHHHHHHhhCCCCccccCCceEEecCCcccc
Confidence 988 55566778888887653 379999999999999999999999999999999999999999998764
No 3
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=100.00 E-value=5e-54 Score=405.91 Aligned_cols=280 Identities=33% Similarity=0.591 Sum_probs=232.4
Q ss_pred cCCCeEEEEeCcccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCCCCeE
Q 019550 30 QDCCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTV 109 (339)
Q Consensus 30 ~~~~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~V 109 (339)
....|+ |...++.++.++++++|++++|+||+|.|++++.+|++|++||.+|++++|++.|+|+|+|++++.+++|++|
T Consensus 9 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~Y~e~l~~~~l~~~~~~~~V 87 (294)
T 3adn_A 9 EKKQWH-ETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHV 87 (294)
T ss_dssp ---CEE-CCSCSSEEEEECCSCEEEEC----CCCEEECCTTTCCEEEETTEEEEETTTHHHHHHHHHHHHHHHSTTCCEE
T ss_pred hhhccc-cccCCCceEEEEcccEEEEeECCCceEEEEEcCCcceEEEECCeEeeccCchhHHHHHHHHHHHhcCCCCCEE
Confidence 445799 5578999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhh-ccccCCCCeEEEEccHHHHHHhcCCceeEEEecCCC
Q 019550 110 FIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVN-QEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLAD 188 (339)
Q Consensus 110 L~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~-~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~d 188 (339)
|+||||+|+++++++++.+..+|++||||++++++||++++.. ..+++++|++++++|++++++...++||+|++|+++
T Consensus 88 LdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~ 167 (294)
T 3adn_A 88 LIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTD 167 (294)
T ss_dssp EEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC--
T ss_pred EEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCCC
Confidence 9999999999999999888899999999999999999999754 334568999999999999998777899999999999
Q ss_pred CCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeeccc-CCceeEEEE
Q 019550 189 PVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF-ADTWGWVMA 267 (339)
Q Consensus 189 ~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~-~~~~~~~~a 267 (339)
|. ++...|++.+||+. ++++|+|||++++|.++| +...+.+..+.++++++|+++.+|.+.+|+| ++.|+|++|
T Consensus 168 p~--~~~~~l~~~~f~~~-~~~~LkpgG~lv~~~~s~--~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~a 242 (294)
T 3adn_A 168 PI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGVC--FLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWA 242 (294)
T ss_dssp ----------CCHHHHHH-HHHTEEEEEEEEEEEEEC--SSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEEEE
T ss_pred cc--CcchhccHHHHHHH-HHHhcCCCCEEEEecCCc--ccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEEEE
Confidence 87 66778999999999 899999999999998877 4556788999999999999999999999999 677999999
Q ss_pred ecCCCC--CCHHHHHHHHHhcCcccccccCHHhhHHhccCCHHHHHhhcCC
Q 019550 268 SDQPFS--INAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNE 316 (339)
Q Consensus 268 s~~p~~--~~~~~l~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~~~ 316 (339)
|+.+.+ ++.+.+.+|++... .+++|||+++|+++|+||+|++++|++.
T Consensus 243 s~~~~~~~~~~~~~~~~~~~~~-~~~~yy~~~~h~~~f~lp~~~~~~~~~~ 292 (294)
T 3adn_A 243 TDNDALRHLSTEIIQARFLASG-LKCRYYNPAIHTAAFALPQYLQDALASQ 292 (294)
T ss_dssp ESCTTCSCCHHHHCCCCCC-----CCSSCCHHHHHHTTCCCHHHHHHCCCC
T ss_pred eCCcccccCCHHHHHHHHhccC-CCCeEECHHHHHHHhcCcHHHHHHhhcc
Confidence 998643 34455555554432 3799999999999999999999999764
No 4
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=100.00 E-value=7.3e-52 Score=387.46 Aligned_cols=273 Identities=30% Similarity=0.608 Sum_probs=242.2
Q ss_pred CCeEEEEeCcccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCCCCeEEE
Q 019550 32 CCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFI 111 (339)
Q Consensus 32 ~~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~VL~ 111 (339)
..||+|..+++.+++++++++|++.+|+||+|.|+++..+|+.|++||..|++++|++.|+|+|+|++++.++++++||+
T Consensus 2 ~~w~~e~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~de~~y~e~l~~~~l~~~~~~~~VLd 81 (275)
T 1iy9_A 2 ELWYTEKQTKNFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHVLV 81 (275)
T ss_dssp CEEEEEEEETTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEEEE
T ss_pred CccEEEecCCCcEEEEeeeeEEEEEECCCceEEEEEcCCCCEEEEECCEEeecccchhHHHHHHHHHHHhhCCCCCEEEE
Confidence 47999999999999999999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecCCCCCC
Q 019550 112 MGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVE 191 (339)
Q Consensus 112 IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~d~~~ 191 (339)
||||+|.++++++++++..+|++||+||+++++||++++.....++++|++++.+|++++++...++||+|++|++++.
T Consensus 82 iG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~- 160 (275)
T 1iy9_A 82 VGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPV- 160 (275)
T ss_dssp ESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCC-
T ss_pred ECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCC-
Confidence 9999999999999987789999999999999999999865333356799999999999999877789999999999876
Q ss_pred CCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeeccc-CCceeEEEEecC
Q 019550 192 GGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF-ADTWGWVMASDQ 270 (339)
Q Consensus 192 ~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~-~~~~~~~~as~~ 270 (339)
++...|++.+||+. ++++|+|||+++++.++| +...+.+..+.++++++|+++..|.+.+|+| ++.|+|++|||.
T Consensus 161 -~~~~~l~~~~~~~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~ask~ 236 (275)
T 1iy9_A 161 -GPAVNLFTKGFYAG-IAKALKEDGIFVAQTDNP--WFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTIGSKK 236 (275)
T ss_dssp -SCCCCCSTTHHHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEEEESS
T ss_pred -CcchhhhHHHHHHH-HHHhcCCCcEEEEEcCCc--cccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEEeeCC
Confidence 56678999999999 899999999999998776 4567788999999999999999999999999 677999999987
Q ss_pred CCCCCHHHHHHHHHhcCcccccccCHHhhHHhccCCHHHHHhhc
Q 019550 271 PFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLL 314 (339)
Q Consensus 271 p~~~~~~~l~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~ 314 (339)
..+.+.+ ++ +.. ..+++|||+++|+++|+||+|++++|+
T Consensus 237 ~~~~~~~---~~-~~~-~~~~~~~~~~~~~~~f~lp~~~~~~~~ 275 (275)
T 1iy9_A 237 YDPLAVE---DS-RFF-DIETKYYTKDIHKAAFVLPKFVSDLIK 275 (275)
T ss_dssp CCTTCCC---GG-GCC-CCCCSSCCHHHHHHTTCCCHHHHTTC-
T ss_pred CCccccc---hh-hcc-ccCCeEeCHHHHHHHcCCCHHHHHhhC
Confidence 5443212 22 222 247999999999999999999998763
No 5
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=100.00 E-value=3.2e-49 Score=373.20 Aligned_cols=280 Identities=29% Similarity=0.545 Sum_probs=239.5
Q ss_pred cCCCeEEEEeC-cccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCCCCe
Q 019550 30 QDCCWFEEVID-DDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKT 108 (339)
Q Consensus 30 ~~~~w~~e~~~-~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~ 108 (339)
..+.||+|..+ ++..++++++++|++.+|+||+|.|+++..+|+.|++||..|++.++++.|+|+++|++++.++++++
T Consensus 14 ~~~~w~~e~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~ 93 (296)
T 1inl_A 14 RQHLWYFEYYTGNNVGLFMKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLHPNPKK 93 (296)
T ss_dssp CSSEEEEEECTTSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCE
T ss_pred CCCceEEEecCCCCceEEeecccEEEEEECCCccEEEEEcCCCcEEEEECCEEeecccchhHHHHHHhHHHHhcCCCCCE
Confidence 66789999998 99999999999999999999999999999999999999999999999999999999999888888999
Q ss_pred EEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecCCC
Q 019550 109 VFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLAD 188 (339)
Q Consensus 109 VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~d 188 (339)
||+||||+|.++++++++.+..+|++||+|+.+++.|+++++.....+++++++++.+|+++++....++||+|++|+++
T Consensus 94 VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~ 173 (296)
T 1inl_A 94 VLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTD 173 (296)
T ss_dssp EEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC--
T ss_pred EEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCCC
Confidence 99999999999999999877889999999999999999998642223457899999999999987767889999999998
Q ss_pred CCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeeccc-CCceeEEEE
Q 019550 189 PVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF-ADTWGWVMA 267 (339)
Q Consensus 189 ~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~-~~~~~~~~a 267 (339)
++. ++...+++.+|++. ++++|+|||+++++.++| +...+.+..+.++++++|+++..|.+.+|+| ++.|+|++|
T Consensus 174 ~~~-~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~a 249 (296)
T 1inl_A 174 PTA-GQGGHLFTEEFYQA-CYDALKEDGVFSAETEDP--FYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYTFA 249 (296)
T ss_dssp ---------CCSHHHHHH-HHHHEEEEEEEEEECCCT--TTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEEEE
T ss_pred ccc-CchhhhhHHHHHHH-HHHhcCCCcEEEEEccCc--ccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEEEe
Confidence 721 56678899999999 899999999999998877 4566788999999999999999999999999 577999999
Q ss_pred ecCCCCCCHHHHHHHHHhcCcccccccCHHhhHHhccCCHHHHHhhcC
Q 019550 268 SDQPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLN 315 (339)
Q Consensus 268 s~~p~~~~~~~l~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~~ 315 (339)
||...+.. +...+|++.+. .+++|||+++|+++|+||+|++++|+.
T Consensus 250 s~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~f~~p~~~~~~~~~ 295 (296)
T 1inl_A 250 SKGIDPIK-DFDPEKVRKFN-KELKYYNEEVHVASFALPNFVKKELGL 295 (296)
T ss_dssp ESSCCTTT-TCCHHHHHTCS-SCCSSCCHHHHHHTTCCCHHHHHHTTC
T ss_pred cCCCChhh-hhhhhhHhhcc-CCceecCHHHHHHHcCCcHHHHHHHhh
Confidence 98754431 11145665542 379999999999999999999998853
No 6
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=100.00 E-value=1.6e-49 Score=372.49 Aligned_cols=271 Identities=30% Similarity=0.533 Sum_probs=234.8
Q ss_pred CCeEEEEeCcccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCCCCeEEE
Q 019550 32 CCWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFI 111 (339)
Q Consensus 32 ~~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~VL~ 111 (339)
+.||+|..+++.++.++++++|++.+|+||+|.|+++..+|+.|++||..|+++++++.|+|+|+|++++.++++++||+
T Consensus 2 ~~w~~e~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VLd 81 (281)
T 1mjf_A 2 ERAFIEWYPRGYGVAFKIKKKIYEKLSKYQKIEVYETEGFGRLLALDGTVQLVTLGERSYHEPLVHPAMLAHPKPKRVLV 81 (281)
T ss_dssp --CEEEEEGGGEEEEECEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTTHHHHHHHHHHHHHHSSCCCEEEE
T ss_pred CccEEEecCCCceEEEeeccEEEEeeCCCccEEEEECCCccEEEEECCEeeeccccchHHHHHHHHHHHhhCCCCCeEEE
Confidence 57999999999999999999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhcccc-------CCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 112 MGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAF-------CSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 112 IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~-------~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
||||+|.++++++++ +..+|++||+|+.+++.|++++ .....+ ++++++++.+|+++++.. .++||+|++
T Consensus 82 iG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~ 158 (281)
T 1mjf_A 82 IGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFDVIIA 158 (281)
T ss_dssp EECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEEEEEE
T ss_pred EcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCCeeEEEE
Confidence 999999999999998 7889999999999999999998 322123 478999999999999977 788999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeecccCCceeE
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGW 264 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~~~~~~ 264 (339)
|++++. ++...+++.+|++. ++++|+|||+++++.+++ +...+.++.+.++++++|+++..+...+|+|++.|+|
T Consensus 159 d~~~~~--~~~~~l~~~~~l~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~g~~~~ 233 (281)
T 1mjf_A 159 DSTDPV--GPAKVLFSEEFYRY-VYDALNNPGIYVTQAGSV--YLFTDELISAYKEMKKVFDRVYYYSFPVIGYASPWAF 233 (281)
T ss_dssp ECCCCC-------TTSHHHHHH-HHHHEEEEEEEEEEEEET--TTSHHHHHHHHHHHHHHCSEEEEEEECCTTSSSSEEE
T ss_pred CCCCCC--CcchhhhHHHHHHH-HHHhcCCCcEEEEEcCCc--ccCHHHHHHHHHHHHHHCCceEEEEEecCCCCceEEE
Confidence 999876 55677889999999 899999999999998766 4566788999999999999999999999999888999
Q ss_pred EEEecCC-CCCCHHHHHHHHHhcCcccccccCHHhhHHhccCCHHHHHhhcC
Q 019550 265 VMASDQP-FSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLN 315 (339)
Q Consensus 265 ~~as~~p-~~~~~~~l~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~~ 315 (339)
++||+.+ .+.+ ...+|++. .+++|||+++|+++|+||+|++++|++
T Consensus 234 ~~as~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~f~~p~~~~~~~~~ 280 (281)
T 1mjf_A 234 LVGVKGDIDFTK--IDRERAKK---LQLEYYDPLMHETLFQMPKYIRETLQR 280 (281)
T ss_dssp EEEEESSCCTTC--CCHHHHHT---SCCSSCCGGGGGGGGCCCHHHHHHHC-
T ss_pred EEeeCCCCCccc--cchhhhhc---cCCcEECHHHHHHHhcCcHHHHHHHhh
Confidence 9999973 3322 11334443 379999999999999999999999863
No 7
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=100.00 E-value=1.2e-49 Score=373.73 Aligned_cols=272 Identities=28% Similarity=0.525 Sum_probs=239.8
Q ss_pred CCeEEEE--eCcccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCCCCeE
Q 019550 32 CCWFEEV--IDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTV 109 (339)
Q Consensus 32 ~~w~~e~--~~~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~V 109 (339)
+.||+|. ..++.+++++++++|++.+|+||+|.|++++.+|+.|++||.+|+++++++.|+++++|++++.++++++|
T Consensus 3 ~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~V 82 (283)
T 2i7c_A 3 KKWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNV 82 (283)
T ss_dssp CCEEEECCTTSTTCCEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCEE
T ss_pred ceeEEEcccCCCCceEEEecccEEEEEECCCccEEEEEcCCCCEEEEECCEeeecccchhhHHHHHHHHHHhcCCCCCeE
Confidence 4699998 66999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred EEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecCCCC
Q 019550 110 FIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADP 189 (339)
Q Consensus 110 L~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~d~ 189 (339)
|+||||+|.++++++++.+..+|++||+|+.+++.|+++++..+..++++|++++++|+.+++....++||+|++|++++
T Consensus 83 LdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~ 162 (283)
T 2i7c_A 83 LVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDP 162 (283)
T ss_dssp EEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCT
T ss_pred EEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcCCCC
Confidence 99999999999999998778899999999999999999987544345579999999999999987678899999999988
Q ss_pred CCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeecccC-CceeEEEEe
Q 019550 190 VEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFA-DTWGWVMAS 268 (339)
Q Consensus 190 ~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~-~~~~~~~as 268 (339)
. ++...+++.+|++. ++++|+|||+++++.+++ +...+.+..+.++++++|+++..|.+.+|+|+ +.|+|++||
T Consensus 163 ~--~~~~~l~~~~~l~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~~~~s 237 (283)
T 2i7c_A 163 I--GPAETLFNQNFYEK-IYNALKPNGYCVAQCESL--WIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCS 237 (283)
T ss_dssp T--TGGGGGSSHHHHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEEE
T ss_pred C--CcchhhhHHHHHHH-HHHhcCCCcEEEEECCCc--ccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEEEEEe
Confidence 6 66678999999999 899999999999998876 55667788999999999999999999999995 557999999
Q ss_pred cCC----CCCCHHHHHHHHHhcCcccccccCHHhhHHhccCCHHHHHhhc
Q 019550 269 DQP----FSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLL 314 (339)
Q Consensus 269 ~~p----~~~~~~~l~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~ 314 (339)
+.+ .+++ +...+| ...++|||+++|+++|+||+|+++.|+
T Consensus 238 ~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~f~~p~~~~~~~~ 281 (283)
T 2i7c_A 238 KTDTGLTKPNK-KLESKE-----FADLKYYNYENHSAAFKLPAFLLKEIE 281 (283)
T ss_dssp SSTTCSSSCSS-CCCSGG-----GTTCSSCCHHHHHHTTCCCHHHHHHHT
T ss_pred CCCccccCchh-hhhhhh-----hhcCceECHHHHHHHhcCcHHHHHHhh
Confidence 863 2221 111111 125699999999999999999999886
No 8
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=100.00 E-value=6.8e-49 Score=374.00 Aligned_cols=267 Identities=31% Similarity=0.576 Sum_probs=224.2
Q ss_pred eCcccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCCCCeEEEEecchhH
Q 019550 39 IDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGS 118 (339)
Q Consensus 39 ~~~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~VL~IG~G~G~ 118 (339)
..++..+.++++++|++.+|+||+|.|++++.+|+.|++||.+|++.++++.|+++++|++++.++++++||+||||+|.
T Consensus 42 ~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VLdIG~G~G~ 121 (314)
T 2b2c_A 42 AWPGQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDGG 121 (314)
T ss_dssp CCTTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEESSSSSHHHHHHHHHHHHHSSSCCEEEEESCTTSH
T ss_pred cCCCceEEeecccEEEEEECCCCCEEEEEcCCCCEEEEECCEeecCCcchhHHHHHHHHHHHhhCCCCCEEEEEcCCcCH
Confidence 56888899999999999999999999999999999999999999999999999999999998888899999999999999
Q ss_pred HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecCCCCCCCCccccC
Q 019550 119 AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQL 198 (339)
Q Consensus 119 ~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~d~~~~~p~~~L 198 (339)
++++++++.+..+|++||+|+++++.|+++++.....++++|++++.+|+++++....++||+|++|++++. ++...+
T Consensus 122 ~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~--~~~~~l 199 (314)
T 2b2c_A 122 ILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPV--GPAESL 199 (314)
T ss_dssp HHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC-----------
T ss_pred HHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCC--Ccchhh
Confidence 999999987788999999999999999999875422345789999999999999876788999999999876 556678
Q ss_pred CcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeecccC-CceeEEEEecCCC-----
Q 019550 199 YTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFA-DTWGWVMASDQPF----- 272 (339)
Q Consensus 199 ~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~-~~~~~~~as~~p~----- 272 (339)
++.+||+. ++++|+|||+++++.+++ +...+.+..+.++++++|+++..+.+.+|+|+ +.|+|++||+.+.
T Consensus 200 ~t~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~~~ask~~~~~~~~ 276 (314)
T 2b2c_A 200 FGQSYYEL-LRDALKEDGILSSQGESV--WLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYLICAKNANRDVTT 276 (314)
T ss_dssp ----HHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESSTTCCTTS
T ss_pred hHHHHHHH-HHhhcCCCeEEEEECCCc--ccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCceEEEEEeCCCcccccC
Confidence 99999999 899999999999998877 55667788999999999999999999999995 4579999998732
Q ss_pred CCCHHHHHHHHHhcCcccccccCHHhhHHhccCCHHHHHhhc
Q 019550 273 SINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLL 314 (339)
Q Consensus 273 ~~~~~~l~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~ 314 (339)
++. +...+|+... +++|||+++|+++|+||+|++++|+
T Consensus 277 ~~~-~~~~~~~~~~---~~~yy~~~~h~~~f~lp~~~~~~l~ 314 (314)
T 2b2c_A 277 PAR-TLTAEQIKAL---NLRFYNSEVHKAAFVLPQFVKNALE 314 (314)
T ss_dssp CSS-CCCHHHHHHT---TCSSCCHHHHHHTTCCCHHHHHTCC
T ss_pred chh-hhhHHhhccc---CCeEECHHHHHHHccCcHHHHHhhC
Confidence 221 2234555442 7999999999999999999998763
No 9
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=100.00 E-value=1.1e-48 Score=371.00 Aligned_cols=280 Identities=29% Similarity=0.556 Sum_probs=233.2
Q ss_pred CccCCCeEEEEeC--cccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCC
Q 019550 28 NLQDCCWFEEVID--DDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQN 105 (339)
Q Consensus 28 ~~~~~~w~~e~~~--~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~ 105 (339)
...++.||+|..+ ++..++++++++||+++|+||+|.|++++.+|+.|++||.+|+++++++.|++++.|++++.+++
T Consensus 16 ~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~y~e~l~~~~l~~~~~ 95 (304)
T 2o07_A 16 AAIREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPN 95 (304)
T ss_dssp --CBTTEEEECCTTSTTEEEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSS
T ss_pred cccccceEEEeccCCCCceEEEEeccEEEEEECCCcEEEEEEcCCCceEEEECCEEEeecccchHHHHHHHHHHHhhCCC
Confidence 3456789999865 89999999999999999999999999999999999999999999999999999999999888889
Q ss_pred CCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEec
Q 019550 106 PKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGD 185 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D 185 (339)
+++||+||||+|.++++++++.+..+|++||+|+++++.|+++++.....+++++++++++|+++++....++||+|++|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d 175 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITD 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEEC
Confidence 99999999999999999999877889999999999999999998753223457999999999999998777889999999
Q ss_pred CCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeecccC-CceeE
Q 019550 186 LADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFA-DTWGW 264 (339)
Q Consensus 186 ~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~-~~~~~ 264 (339)
++++. ++...+++.+||+. ++++|+|||+++++.+++ |...+....+.++++++|+++..+.+.+|+|+ +.|+|
T Consensus 176 ~~~~~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~ 250 (304)
T 2o07_A 176 SSDPM--GPAESLFKESYYQL-MKTALKEDGVLCCQGECQ--WLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGF 250 (304)
T ss_dssp CC-------------CHHHHH-HHHHEEEEEEEEEEEECT--TTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEE
T ss_pred CCCCC--CcchhhhHHHHHHH-HHhccCCCeEEEEecCCc--ccchHHHHHHHHHHHHhCCCceeEEEEeccccCcceEE
Confidence 99876 55567888999999 899999999999998766 55667788899999999999999888999994 56999
Q ss_pred EEEecCCC---CCCH-HHHHHHHHhcCcccccccCHHhhHHhccCCHHHHHhhcC
Q 019550 265 VMASDQPF---SINA-EEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLN 315 (339)
Q Consensus 265 ~~as~~p~---~~~~-~~l~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~~ 315 (339)
++||+.|. ..+. +...+++.. .+++|||+++|+++|+||+|+++.|+.
T Consensus 251 ~~as~~~~~~~~~~~~~~~~~~~~~---~~~~~y~~~~h~~~f~lp~~~~~~~~~ 302 (304)
T 2o07_A 251 MLCSKNPSTNFQEPVQPLTQQQVAQ---MQLKYYNSDVHRAAFVLPEFARKALND 302 (304)
T ss_dssp EEEESSTTCCSSSCSSCCCHHHHHH---TTCSSCCHHHHHHTTCCCHHHHHHHHC
T ss_pred EEEeCCcccccccchhhhhHhhhcc---cCCeEECHHHHHHHhcCcHHHHHHhhc
Confidence 99998742 1111 111233322 379999999999999999999999974
No 10
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=100.00 E-value=1.5e-48 Score=372.65 Aligned_cols=279 Identities=28% Similarity=0.532 Sum_probs=243.6
Q ss_pred cCCCeEEEEeC--cccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCCCC
Q 019550 30 QDCCWFEEVID--DDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPK 107 (339)
Q Consensus 30 ~~~~w~~e~~~--~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~ 107 (339)
.++.||+|..+ ++.++.++++++|++++|+||+|.|++++.+|+.|++||..|++.+|++.|+|+++|++++.+++++
T Consensus 39 ~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~ 118 (321)
T 2pt6_A 39 FSKKWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPK 118 (321)
T ss_dssp --CCEEEECCTTSTTCCEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCC
T ss_pred ccceEEEEeccCCCCceEEEecccEEEEEECCCceEEEEEcCCCcEEEEECCEeeeCcccchHHHHHHHHHHHhcCCCCC
Confidence 46789999988 8999999999999999999999999999989999999999999999999999999999988888899
Q ss_pred eEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecCC
Q 019550 108 TVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLA 187 (339)
Q Consensus 108 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~ 187 (339)
+||+||||+|.++++++++.+..+|++||+|+++++.|+++++.....+++++++++.+|+.+++....++||+|++|++
T Consensus 119 ~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~ 198 (321)
T 2pt6_A 119 NVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSS 198 (321)
T ss_dssp EEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECC
T ss_pred EEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCc
Confidence 99999999999999999987788999999999999999999875333345789999999999998776788999999999
Q ss_pred CCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeecccC-CceeEEE
Q 019550 188 DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFA-DTWGWVM 266 (339)
Q Consensus 188 d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~-~~~~~~~ 266 (339)
+|. ++...+++.+|++. ++++|+|||+++++.+++ +...+.+..+.++++++|+++..|.+.+|+|+ +.|+|++
T Consensus 199 ~p~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~~ 273 (321)
T 2pt6_A 199 DPI--GPAETLFNQNFYEK-IYNALKPNGYCVAQCESL--WIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILC 273 (321)
T ss_dssp CSS--SGGGGGSSHHHHHH-HHHHEEEEEEEEEEECCT--TTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEE
T ss_pred CCC--CcchhhhHHHHHHH-HHHhcCCCcEEEEEcCCc--ccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEEE
Confidence 886 56678889999999 899999999999998776 45667889999999999999999999999995 5799999
Q ss_pred EecCCCCCCHHHHHHHHHhcCcccccccCHHhhHHhccCCHHHHHhhcC
Q 019550 267 ASDQPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLN 315 (339)
Q Consensus 267 as~~p~~~~~~~l~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~~ 315 (339)
||+.+.+.+. ..+|++.+...+++|||+++|+++|+||+|++++|++
T Consensus 274 as~~~~p~~~--~~~~~~~~~~~~~~~y~~~~h~~~f~lp~~~~~~~~~ 320 (321)
T 2pt6_A 274 CSKTDTGLTK--PNKKLESKEFADLKYYNYENHSAAFKLPAFLLKEIEN 320 (321)
T ss_dssp EESSTTCSSS--CSSCCCSGGGTTCSSCCHHHHHHTTCCCHHHHHHTSC
T ss_pred eeCCCCccch--hHHHHHhccCCCCeEECHHHHHHHhCCcHHHHHHHhh
Confidence 9998655421 1233332211378999999999999999999999863
No 11
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=100.00 E-value=2.7e-48 Score=361.06 Aligned_cols=256 Identities=17% Similarity=0.252 Sum_probs=226.8
Q ss_pred CeEEEEeCcccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCCCCeEEEE
Q 019550 33 CWFEEVIDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIM 112 (339)
Q Consensus 33 ~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~VL~I 112 (339)
+||+|..+++.+++++++++|++++|+||+|.|++++.+|++|++||. |+++.|++.|+++++|++++.++++++||+|
T Consensus 1 ~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~-q~~~~d~~~y~e~l~~~~~~~~~~~~~VL~i 79 (262)
T 2cmg_A 1 MWITQEITPYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQ-LLFKNFLHIESELLAHMGGCTKKELKEVLIV 79 (262)
T ss_dssp CEEEEEEETTEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTE-EEEGGGTHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred CcEEEEcCCCceEEEEEeeEEEeeECCCceEEEEECCCccEEEEEcCc-ccccchHHHHHHHHHHHhhhcCCCCCEEEEE
Confidence 599999999999999999999999999999999999999999999999 9999999999999999999888999999999
Q ss_pred ecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecCCCCCCC
Q 019550 113 GGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEG 192 (339)
Q Consensus 113 G~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~d~~~~ 192 (339)
|||+|.++++++++ + .+|++||+|+++++.|+++++.....++++|++++.+|+++++ ++||+|++|+++|.
T Consensus 80 G~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii~d~~dp~-- 151 (262)
T 2cmg_A 80 DGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIFCLQEPDI-- 151 (262)
T ss_dssp SSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEEESSCCCH--
T ss_pred eCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEEECCCChH--
Confidence 99999999999998 7 8999999999999999999865333356799999999999886 67999999987653
Q ss_pred CccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeecccCCceeEEEEecCCC
Q 019550 193 GPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPF 272 (339)
Q Consensus 193 ~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~~~~~~~~as~~p~ 272 (339)
.||+. ++++|+|||+++++.+++ +...+.+..+.++++++|+++..+...+|+ ++.|+|++||+.+.
T Consensus 152 ---------~~~~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~~~~~~~~vP~-~g~~~~~~as~~~~ 218 (262)
T 2cmg_A 152 ---------HRIDG-LKRMLKEDGVFISVAKHP--LLEHVSMQNALKNMGGVFSVAMPFVAPLRI-LSNKGYIYASFKTH 218 (262)
T ss_dssp ---------HHHHH-HHTTEEEEEEEEEEEECT--TTCHHHHHHHHHHHHTTCSEEEEECCTTCT-TCCEEEEEEESSCC
T ss_pred ---------HHHHH-HHHhcCCCcEEEEEcCCc--ccCHHHHHHHHHHHHHhCCceEEEEEccCC-CcccEEEEeeCCCC
Confidence 38999 899999999999998776 345567889999999999999999888999 88899999999865
Q ss_pred CC-CHHHHHHHHHhcCcccccccCHHhhHHhccCCHHHHHhhc
Q 019550 273 SI-NAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLL 314 (339)
Q Consensus 273 ~~-~~~~l~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~ 314 (339)
|. +.. .++++.+ .+++|||+++|+++|+||+|++++|+
T Consensus 219 p~~~~~--~~~~~~~--~~~~~y~~~~h~~~f~lp~~~~~~l~ 257 (262)
T 2cmg_A 219 PLKDLM--TPKIEAL--TSVRYYNEDIHRAAFALPKNLQEVFK 257 (262)
T ss_dssp TTTTCC--HHHHTTC--CSCSSCCHHHHHHTTCCCHHHHHHGG
T ss_pred chhhcC--HhHhhcc--CCCcEECHHHHHHHcCCCHHHHHHHH
Confidence 44 221 2344443 47999999999999999999999997
No 12
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=100.00 E-value=3.3e-47 Score=360.62 Aligned_cols=278 Identities=26% Similarity=0.484 Sum_probs=235.0
Q ss_pred CccCCCeEEEEeC--cccceeeeeceEEEeeecCCceEEEEEeC---CceEEEEEcCeeeccccChhhHHHHHhhhhccc
Q 019550 28 NLQDCCWFEEVID--DDLKWSFALNRVLHKGTSEFQDIALLDTK---RFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLC 102 (339)
Q Consensus 28 ~~~~~~w~~e~~~--~~~~~~~~~~~vl~~~~s~~q~I~V~e~~---~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~ 102 (339)
....+.||+|..+ ++..++++++++|++.+|+||+|.|+++. .+|+.|++||.+|+++.+++.|++++++++++.
T Consensus 13 ~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~p~g~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~ 92 (304)
T 3bwc_A 13 ELISGGWFREENDQWPGQAMSLRVEKVLYDAPTKFQHLTIFESDPKGPWGTVMALDGCIQVTDYDEFVYHEVLGHTSLCS 92 (304)
T ss_dssp CCCTTSEEEECCSSSCSEEEEEEEEEEEEEEECSSSEEEEEEECTTSSCCEEEEETTEEEEETTTHHHHHHHHHHHHHTT
T ss_pred ccccCceEEEeccCCCCceEEEecccEEEEeECCCCCEEEEEecCCCccceEEEECCeeeeecccchHHHHHHhhhhhhc
Confidence 4556789999987 89999999999999999999999999998 789999999999999999999999999999988
Q ss_pred CCCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeE
Q 019550 103 HQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDV 181 (339)
Q Consensus 103 ~~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDv 181 (339)
++++++||+||||+|.++++++++.+..+|++||+|+.+++.|+++++.....+.+++++++.+|+.+++.. ..++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 888999999999999999999998778899999999999999999986432234579999999999999875 4678999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH-CCceEEEEEeeccc-C
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV-FKHVVAYTAHVPSF-A 259 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~iP~~-~ 259 (339)
|++|.+++. ++...|++.+||+. ++++|+|||+++++.+++ +........+.++++++ |+.+..+...+|+| +
T Consensus 173 Ii~d~~~~~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~ 247 (304)
T 3bwc_A 173 VIIDTTDPA--GPASKLFGEAFYKD-VLRILKPDGICCNQGESI--WLDLELIEKMSRFIRETGFASVQYALMHVPTYPC 247 (304)
T ss_dssp EEEECC-----------CCHHHHHH-HHHHEEEEEEEEEEECCT--TTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTT
T ss_pred EEECCCCcc--ccchhhhHHHHHHH-HHHhcCCCcEEEEecCCc--ccchHHHHHHHHHHHhCCCCcEEEEEeecccccC
Confidence 999999876 56678999999999 899999999999998776 45566788999999999 99999999999999 5
Q ss_pred CceeEEEEecCCCC--CCH-HHH-HHHHHhcCcccccccCHHhhHHhccCCHHHHHhhc
Q 019550 260 DTWGWVMASDQPFS--INA-EEI-DNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLL 314 (339)
Q Consensus 260 ~~~~~~~as~~p~~--~~~-~~l-~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~ 314 (339)
+.|+|++||+.|.+ .++ +.+ .+|++ .+++|||+++|+++|+||+|++++|+
T Consensus 248 g~w~f~~as~~~~~~~~~~~~~~~~~~~~----~~~~~y~~~~~~~~f~~p~~~~~~~~ 302 (304)
T 3bwc_A 248 GSIGTLVCSKKAGVDVTKPLRPVEDMPFA----KDLKYYDSEMHKASFALPRFARHINN 302 (304)
T ss_dssp SCCEEEEEESSSSCCTTSCSSCGGGSGGG----GGCSSCCHHHHHHHTCCCGGGGGGTC
T ss_pred cceEEEEEeCCccccccChhhhhhhhhhc----cCCeEECHHHHHHHcCCCHHHHHHhc
Confidence 77999999987431 111 112 23332 37999999999999999999999886
No 13
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=100.00 E-value=3.1e-46 Score=358.47 Aligned_cols=278 Identities=29% Similarity=0.543 Sum_probs=236.2
Q ss_pred cCCCeEEEEe--CcccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCCCC
Q 019550 30 QDCCWFEEVI--DDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPK 107 (339)
Q Consensus 30 ~~~~w~~e~~--~~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~ 107 (339)
.+..||+|.. .++.++.|+++++||+.+|+||+|.|+++..+|+.|++||.+|+++++++.|+++++|++++.+++++
T Consensus 43 ~~~~w~~e~~~~~~~~~~~~~v~~vl~~~~s~~q~I~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~L~~l~l~~~~~~~ 122 (334)
T 1xj5_A 43 VIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPK 122 (334)
T ss_dssp CCSSEEEECCTTSTTEEEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSCCC
T ss_pred cccceEEEeccCCCCceEEEEeeeEEEEeecCCeEEEEEEcCCCCeEEEECCEeecCcCcchHHHHHHHHHHHhhCCCCC
Confidence 4578999985 47899999999999999999999999999999999999999999999999999999999988888899
Q ss_pred eEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-CCceeEEEecC
Q 019550 108 TVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-NEKFDVIFGDL 186 (339)
Q Consensus 108 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~yDvIi~D~ 186 (339)
+||+||||+|.++++++++.+..+|++||+|+.+++.|+++++.....+++++++++.+|+.+++... .++||+|++|+
T Consensus 123 ~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~ 202 (334)
T 1xj5_A 123 KVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDS 202 (334)
T ss_dssp EEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECC
T ss_pred EEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECC
Confidence 99999999999999999987788999999999999999999875322345789999999999998754 47899999999
Q ss_pred CCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCc-eEEEEEeecccC-CceeE
Q 019550 187 ADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKH-VVAYTAHVPSFA-DTWGW 264 (339)
Q Consensus 187 ~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~-v~~~~~~iP~~~-~~~~~ 264 (339)
++|. ++...+++.+||+. ++++|+|||+++++.+++ +.....+..+.++++++|+. +..+.+.+|+|. +.|+|
T Consensus 203 ~~p~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~~~~~~~~~vP~y~~g~~gf 277 (334)
T 1xj5_A 203 SDPI--GPAKELFEKPFFQS-VARALRPGGVVCTQAESL--WLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGF 277 (334)
T ss_dssp CCTT--SGGGGGGSHHHHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHHHCSSCEEEEEEECTTSGGGEEEE
T ss_pred CCcc--CcchhhhHHHHHHH-HHHhcCCCcEEEEecCCc--cccHHHHHHHHHHHHHhCccccceEEEeCCcccCCceEE
Confidence 9876 45566889999999 899999999999998776 56666778889999999995 555557899994 67999
Q ss_pred EEEecCC------CCCCHHHH-HHHHHhcCcccccccCHHhhHHhccCCHHHHHhhcCC
Q 019550 265 VMASDQP------FSINAEEI-DNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNE 316 (339)
Q Consensus 265 ~~as~~p------~~~~~~~l-~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~~~ 316 (339)
++||+.. .++ +.+ .++.+ ...+++|||+++|+++|+||+|+++.|+++
T Consensus 278 ~~as~~~~~~~~~~~~--~~~~~~~~~--~~~~~~yy~~~~h~~~f~lp~~~~~~l~~~ 332 (334)
T 1xj5_A 278 MLCSTEGPDVDFKHPL--NPIDESSSK--SNGPLKFYNAEIHSAAFCLPSFAKKVIESK 332 (334)
T ss_dssp EEEECSSSCCCSSSCS--SCCCSGGGT--TTCCCSSCCHHHHHHTTCCCHHHHHHHC--
T ss_pred EEcccCCccccccCch--hhhhhhhhc--ccCCceEECHHHHHHHhcCcHHHHHHHhcc
Confidence 9999852 121 111 11222 134799999999999999999999999754
No 14
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=100.00 E-value=9.7e-47 Score=363.85 Aligned_cols=237 Identities=21% Similarity=0.357 Sum_probs=200.9
Q ss_pred ccCCCeEEEE--eCcccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCCC
Q 019550 29 LQDCCWFEEV--IDDDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNP 106 (339)
Q Consensus 29 ~~~~~w~~e~--~~~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p 106 (339)
...+.|+..+ .+++....|+++++||+++|+||+|.|++++.+||+|+|||.+|++++| +.|||+|+|++++.+ +|
T Consensus 129 ~~rg~~~~~~~p~sdg~~~~y~v~~vl~~~~S~yQ~I~V~es~~~Gr~L~LDG~~Q~te~D-~~Y~e~l~h~~l~~~-~p 206 (381)
T 3c6k_A 129 IVRGGAIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKEDY-TG 206 (381)
T ss_dssp EEESCSSCCBCCCTTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTCCCC-TT
T ss_pred cccCCccCceeECCCCcEEEEEeEEEEEeCCCCCceEEEEEcCCcceEEEECCceeeeCCh-HHHHHHHHHHHhhcC-CC
Confidence 4455555443 4578999999999999999999999999999999999999999999999 679999999998765 58
Q ss_pred CeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhh-hccccC---CCCeEEEEccHHHHHHh---cCCce
Q 019550 107 KTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTV-NQEAFC---SKKLNLVVNDAKAELEK---RNEKF 179 (339)
Q Consensus 107 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~-~~~~~~---~~rv~v~~~D~~~~l~~---~~~~y 179 (339)
++||+||+|+|++++++++|++ .+|++|||||+|+++||+||+. +..+++ ++|++++++||++|+++ ..++|
T Consensus 207 krVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~y 285 (381)
T 3c6k_A 207 KDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREF 285 (381)
T ss_dssp CEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCE
T ss_pred CeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCce
Confidence 9999999999999999999875 8999999999999999999974 333444 46699999999999975 35789
Q ss_pred eEEEecCCCCCC----CCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEE--EEE
Q 019550 180 DVIFGDLADPVE----GGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVA--YTA 253 (339)
Q Consensus 180 DvIi~D~~d~~~----~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~--~~~ 253 (339)
|+||+|++|+.. .+++..||+++||+. ++++|+|||++++|+++| +. .+.+..+.++++++|+.+.. +.+
T Consensus 286 DvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~-~~~~L~p~GVlv~Q~~s~--~~-~~~~~~i~~tl~~vF~~v~~~~~~~ 361 (381)
T 3c6k_A 286 DYVINDLTAVPISTSPEEDSTWEFLRLILDL-SMKVLKQDGKYFTQGNCV--NL-TEALSLYEEQLGRLYCPVEFSKEIV 361 (381)
T ss_dssp EEEEEECCSSCCCCC----CHHHHHHHHHHH-HHHTEEEEEEEEEEEEET--TC-HHHHHHHHHHHTTSSSCEEEEEEEE
T ss_pred eEEEECCCCCcccCcccCcchHHHHHHHHHH-HHHhcCCCCEEEEecCCC--cc-hhHHHHHHHHHHHhCCcceEeeEEE
Confidence 999999987431 134568999999999 899999999999999887 33 45678899999999998864 446
Q ss_pred eecccCCceeEEEEecCCC
Q 019550 254 HVPSFADTWGWVMASDQPF 272 (339)
Q Consensus 254 ~iP~~~~~~~~~~as~~p~ 272 (339)
.||+|++.|+|++|||+..
T Consensus 362 ~VPSy~~~W~F~~aSK~~~ 380 (381)
T 3c6k_A 362 CVPSYLELWVFYTVWKKAK 380 (381)
T ss_dssp CCGGGSSCEEEEEEEECCC
T ss_pred EecCCCCceeeeEEECCCC
Confidence 7999988999999999764
No 15
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=100.00 E-value=2.3e-41 Score=325.31 Aligned_cols=222 Identities=24% Similarity=0.448 Sum_probs=191.0
Q ss_pred cccceeeeeceEEEeeecCCceEEEEEeCCceEEEEEcCeeeccccChhhHHHHHhhhhcccCCCCCeEEEEecchhHHH
Q 019550 41 DDLKWSFALNRVLHKGTSEFQDIALLDTKRFGKVLVIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAA 120 (339)
Q Consensus 41 ~~~~~~~~~~~vl~~~~s~~q~I~V~e~~~~g~~L~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~VL~IG~G~G~~~ 120 (339)
++....++++++||+++|+||+|.|++++.+|++|++||.+|++++| +.|||+|+|+++ .|++|++||+||||+|+++
T Consensus 126 ~~~~~~~~v~~vl~~~~S~yQ~I~V~es~~~G~~L~LDG~~q~te~D-~~YhE~l~~~~~-~~p~pkrVL~IGgG~G~~a 203 (364)
T 2qfm_A 126 DGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGK-EDYTGKDVLILGGGDGGIL 203 (364)
T ss_dssp TCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTC-CCCTTCEEEEEECTTCHHH
T ss_pred CCcEEEEEeeeEEEeccCCCeeEEEEEeCCcceEEEECCEEeeecCc-hHHHHHHhhhhh-hCCCCCEEEEEECChhHHH
Confidence 57788899999999999999999999999999999999999999999 999999999987 6899999999999999999
Q ss_pred HHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhh-ccccCCC---CeEEEEccHHHHHHh---cCCceeEEEecCCC-CCCC
Q 019550 121 REALKHKSLEKVVMCDIDQEVVDFCRRFLTVN-QEAFCSK---KLNLVVNDAKAELEK---RNEKFDVIFGDLAD-PVEG 192 (339)
Q Consensus 121 ~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~-~~~~~~~---rv~v~~~D~~~~l~~---~~~~yDvIi~D~~d-~~~~ 192 (339)
++++++.+ .+|++|||||+++++||++|+.. ..++++| |++++++|+++|++. ..++||+||+|+++ |...
T Consensus 204 rellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~ 282 (364)
T 2qfm_A 204 CEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPIST 282 (364)
T ss_dssp HHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCC
T ss_pred HHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCc
Confidence 99999865 89999999999999999999743 2235555 899999999999986 46889999999998 7633
Q ss_pred CccccCCcHHHHHHHH----ccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEE--EEEeecccCCceeEEE
Q 019550 193 GPCYQLYTKSFYERIL----KPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVA--YTAHVPSFADTWGWVM 266 (339)
Q Consensus 193 ~p~~~L~t~ef~~~~~----~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~--~~~~iP~~~~~~~~~~ 266 (339)
.|. .|++.+||+. + +++|+|||++++|++++. . .+....+.+.+++.|+.|.. |.+.+|+|++.|+|..
T Consensus 283 ~p~-~L~t~eFy~~-~~~~~~~~L~pgGilv~qs~s~~--~-~e~~~~~~~~l~~~F~~v~~~~~~~~vPsy~~~w~f~~ 357 (364)
T 2qfm_A 283 SPE-EDSTWEFLRL-ILDLSMKVLKQDGKYFTQGNCVN--L-TEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYT 357 (364)
T ss_dssp C-----CHHHHHHH-HHHHHHHTEEEEEEEEEEEEETT--C-HHHHHHHHHHHTTSSSCEEEEEEEECCGGGSSCEEEEE
T ss_pred Cch-hhhHHHHHHH-HHHHHHhhCCCCcEEEEEcCCcc--h-HHHHHHHHHHHHHhCCceEEeeEeeecCCchhheEeEE
Confidence 443 5899999999 7 899999999999998763 2 33444344459999999988 8899999988999999
Q ss_pred EecC
Q 019550 267 ASDQ 270 (339)
Q Consensus 267 as~~ 270 (339)
|+|.
T Consensus 358 ~~k~ 361 (364)
T 2qfm_A 358 VWKK 361 (364)
T ss_dssp EEEC
T ss_pred eecc
Confidence 9986
No 16
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=1e-37 Score=296.32 Aligned_cols=247 Identities=19% Similarity=0.254 Sum_probs=207.9
Q ss_pred cCCceEEEEEeCC--ceEEEEEcCeeeccc------cChhhHHHHHhhhhcc---cCCCCC--eEEEEecchhHHHHHHH
Q 019550 58 SEFQDIALLDTKR--FGKVLVIDGKMQSAE------VDEFIYHECLIHPPLL---CHQNPK--TVFIMGGGEGSAAREAL 124 (339)
Q Consensus 58 s~~q~I~V~e~~~--~g~~L~ldG~~q~~~------~d~~~Y~e~l~~~~l~---~~~~p~--~VL~IG~G~G~~~~~l~ 124 (339)
..|...+|...+. +|++|++||..|+++ .+++.|||+|+|++++ .+++++ +||+||||+|.++++++
T Consensus 29 ~~~~~~~~~~d~~~~~g~~L~lDG~~Qs~~~l~dP~~le~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la 108 (317)
T 3gjy_A 29 GEYSVIELEADSYTTDGWLISINGVPSSHIVLGQPQALEFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFA 108 (317)
T ss_dssp CSSSEEEEEECSSSTTEEEEEETTEEEEEEETTCTTCCCSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHH
T ss_pred ceeeeEEEEecCCCCceEEEEECCEeEEEEECCCCcchhhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHH
Confidence 4455588887764 799999999999986 4789999999999987 578776 99999999999999999
Q ss_pred hcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-CCceeEEEecCCCCCCCCccccCCcHHH
Q 019550 125 KHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-NEKFDVIFGDLADPVEGGPCYQLYTKSF 203 (339)
Q Consensus 125 ~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~yDvIi~D~~d~~~~~p~~~L~t~ef 203 (339)
++.+..+|++||||++|+++||++|+.. .++|++++++|++++++.. .++||+||+|++++. ++..+|++.+|
T Consensus 109 ~~~p~~~v~~VEidp~vi~~Ar~~~~~~----~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~--~~~~~L~t~ef 182 (317)
T 3gjy_A 109 DVYPQSRNTVVELDAELARLSREWFDIP----RAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGA--ITPQNFTTVEF 182 (317)
T ss_dssp HHSTTCEEEEEESCHHHHHHHHHHSCCC----CTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTS--CCCGGGSBHHH
T ss_pred HHCCCcEEEEEECCHHHHHHHHHhcccc----CCCceEEEECcHHHHHhhccCCCCCEEEECCCCcc--ccchhhhHHHH
Confidence 9656679999999999999999999764 3689999999999999765 478999999999876 45578999999
Q ss_pred HHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeecccCCcee--EEEEecCCCCC----CHH
Q 019550 204 YERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWG--WVMASDQPFSI----NAE 277 (339)
Q Consensus 204 ~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~~~~~--~~~as~~p~~~----~~~ 277 (339)
|+. ++++|+|||+|++|.++. .....++.+.++|+++|+++..|..+.|.++..|+ +++||+.|++. +.+
T Consensus 183 l~~-~~r~LkpgGvlv~~~~~~---~~~~~~~~~~~tL~~vF~~v~~~~~~~~~~g~~~gN~Vl~As~~plp~~~~~~~~ 258 (317)
T 3gjy_A 183 FEH-CHRGLAPGGLYVANCGDH---SDLRGAKSELAGMMEVFEHVAVIADPPMLKGRRYGNIILMGSDTEFFSSNSTEAS 258 (317)
T ss_dssp HHH-HHHHEEEEEEEEEEEEEC---TTCHHHHHHHHHHHHHCSEEEEEECHHHHTTSSCEEEEEEEESSCCCCTTSHHHH
T ss_pred HHH-HHHhcCCCcEEEEEecCC---cchHHHHHHHHHHHHHCCceEEEEecCCCCCCcCceEEEEEECCCCCcccccchH
Confidence 999 899999999999998643 13356789999999999999998877777776665 48899999875 568
Q ss_pred HHHHHHHhcCcccccccCHHhhHHhccCCHHHHHhhcCCCccccccccc
Q 019550 278 EIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDAR 326 (339)
Q Consensus 278 ~l~~r~~~~~~~~~~yy~~~~h~~~f~lp~~~~~~~~~~~~~~t~~~~~ 326 (339)
++.+|+... +.+.+|++++.++. +..+.++.||+.+.
T Consensus 259 ~l~r~~~~~-~~p~~~~~~~~l~~-----------~~~~a~~~~d~~~~ 295 (317)
T 3gjy_A 259 AITRELLGG-GVPAQYKDESWVRK-----------FASGAQARHDGVST 295 (317)
T ss_dssp HHHHHHTSS-SSCCEEECHHHHHH-----------HTTTCCCBCCCCCC
T ss_pred HHHHHHcCC-CCCeEEECHHHHHH-----------HhCCCCCccCchhh
Confidence 899999876 45899999777543 55677889998874
No 17
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.57 E-value=2.9e-14 Score=130.43 Aligned_cols=151 Identities=15% Similarity=0.114 Sum_probs=106.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc------C
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR------N 176 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~------~ 176 (339)
.++++||+||||+|..+..+++..+ ..+|++||+++++++.|++++...+. .++++++.+|+.+++... .
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~---~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV---DHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC---GGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCCeEEEECCHHHHHHHHHhccCCC
Confidence 4678999999999999999998754 68999999999999999999875432 468999999999887643 5
Q ss_pred CceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC-CCCc-cC----c-----hhhHHHHHHHHHhHC
Q 019550 177 EKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG-PAGI-FT----H-----KEVFSSIYNTIKQVF 245 (339)
Q Consensus 177 ~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~-~~~~-~~----~-----~~~~~~i~~~l~~~F 245 (339)
++||+|++|.... ....+++. +.+.|+|||++++... .++. .. . ......+.+..+.++
T Consensus 155 ~~fD~V~~d~~~~---------~~~~~l~~-~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~i~~~~~~l~ 224 (247)
T 1sui_A 155 GSYDFIFVDADKD---------NYLNYHKR-LIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALA 224 (247)
T ss_dssp TCBSEEEECSCST---------THHHHHHH-HHHHBCTTCCEEEECTTGGGGGGCCTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCchH---------HHHHHHHH-HHHhCCCCeEEEEecCCcCCcccCCCccchhhhhhHHHHHHHHHHHHHh
Confidence 7899999997522 13588998 7999999999987521 0000 00 0 011223444445555
Q ss_pred CceEEEEEeecccCCceeEEEEecC
Q 019550 246 KHVVAYTAHVPSFADTWGWVMASDQ 270 (339)
Q Consensus 246 ~~v~~~~~~iP~~~~~~~~~~as~~ 270 (339)
.+.......+|.+. |+.++.+.
T Consensus 225 ~~~~~~~~~lp~~d---G~~l~~k~ 246 (247)
T 1sui_A 225 VDPRIEICMLPVGD---GITICRRI 246 (247)
T ss_dssp TCTTBCCEEECSTT---CEEEECBC
T ss_pred hCCCeEEEEEecCC---ccEEEEEc
Confidence 54444445567643 47777653
No 18
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.57 E-value=2.3e-14 Score=130.09 Aligned_cols=150 Identities=18% Similarity=0.169 Sum_probs=107.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc------C
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR------N 176 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~------~ 176 (339)
.++++||+||||+|..+.++++..+ ..+|+++|+|+.+++.|++++...+. .++++++.+|+.+++... .
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~---~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV---EHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC---GGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEcCHHHHHHHHHhccCCC
Confidence 4678999999999999999998754 68999999999999999999875432 468999999999987653 4
Q ss_pred CceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC----CCCccC---chh----hHHHHHHHHHhHC
Q 019550 177 EKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG----PAGIFT---HKE----VFSSIYNTIKQVF 245 (339)
Q Consensus 177 ~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~----~~~~~~---~~~----~~~~i~~~l~~~F 245 (339)
++||+|++|...+ ...++++. +.+.|+|||++++... .+. .. ... ....+.+.++.++
T Consensus 146 ~~fD~I~~d~~~~---------~~~~~l~~-~~~~L~pGG~lv~d~~~~~g~~~-~~~~~~~~~~r~~~~~i~~~~~~l~ 214 (237)
T 3c3y_A 146 GSYDFGFVDADKP---------NYIKYHER-LMKLVKVGGIVAYDNTLWGGTVA-QPESEVPDFMKENREAVIELNKLLA 214 (237)
T ss_dssp TCEEEEEECSCGG---------GHHHHHHH-HHHHEEEEEEEEEECTTGGGGGG-SCGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred CCcCEEEECCchH---------HHHHHHHH-HHHhcCCCeEEEEecCCcCCccC-CCcccchhhHHHHHHHHHHHHHHHh
Confidence 7899999996522 13588998 7999999999988531 110 00 001 1233334444444
Q ss_pred CceEEEEEeecccCCceeEEEEecC
Q 019550 246 KHVVAYTAHVPSFADTWGWVMASDQ 270 (339)
Q Consensus 246 ~~v~~~~~~iP~~~~~~~~~~as~~ 270 (339)
.+.....+.+|.+. |+.++.+.
T Consensus 215 ~~~~~~~~~lp~~d---G~~~~~~~ 236 (237)
T 3c3y_A 215 ADPRIEIVHLPLGD---GITFCRRL 236 (237)
T ss_dssp HCTTEEEEEECSTT---CEEEEEEC
T ss_pred cCCCeEEEEEEeCC---ceEEEEEc
Confidence 44444555678643 47777653
No 19
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.56 E-value=5.4e-14 Score=126.93 Aligned_cols=105 Identities=19% Similarity=0.372 Sum_probs=89.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHH-hcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELE-KRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~-~~~~~yDvI 182 (339)
.++++||+||||+|..+..+++..+..+|++||+++.+++.|++++..... .++++++.+|+.+++. ...++||+|
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~fD~V 146 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF---ENQVRIIEGNALEQFENVNDKVYDMI 146 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC---TTTEEEEESCGGGCHHHHTTSCEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEECCHHHHHHhhccCCccEE
Confidence 357899999999999999999866678999999999999999999875432 3689999999998877 556889999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
++|..... ..++++. +.+.|+|||++++.
T Consensus 147 ~~~~~~~~---------~~~~l~~-~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 147 FIDAAKAQ---------SKKFFEI-YTPLLKHQGLVITD 175 (232)
T ss_dssp EEETTSSS---------HHHHHHH-HGGGEEEEEEEEEE
T ss_pred EEcCcHHH---------HHHHHHH-HHHhcCCCeEEEEe
Confidence 99975321 3578998 79999999999884
No 20
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.56 E-value=4.3e-14 Score=125.09 Aligned_cols=149 Identities=21% Similarity=0.265 Sum_probs=103.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
++++||+||||+|..+..+++..+ ..+|++||+++.+++.|++++..... .++++++.+|+.+++....+ ||+|+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~-fD~v~ 131 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL---IDRVELQVGDPLGIAAGQRD-IDILF 131 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG---GGGEEEEESCHHHHHTTCCS-EEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC---CceEEEEEecHHHHhccCCC-CCEEE
Confidence 578999999999999999998755 68999999999999999999875432 36899999999998766556 99999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCC-CccC---chhhHHHHHHHHHhHCCceEEEEEeecccC
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPA-GIFT---HKEVFSSIYNTIKQVFKHVVAYTAHVPSFA 259 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~-~~~~---~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~ 259 (339)
+|.... ....+++. +.+.|+|||++++..... +... .......+.+.++..+.+.......+|..
T Consensus 132 ~~~~~~---------~~~~~l~~-~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~- 200 (210)
T 3c3p_A 132 MDCDVF---------NGADVLER-MNRCLAKNALLIAVNALRRGSVAESHEDPETAALREFNHHLSRRRDFFTTIVPVG- 200 (210)
T ss_dssp EETTTS---------CHHHHHHH-HGGGEEEEEEEEEESSSSCC------------CCCHHHHHHTTCTTEEEEEECST-
T ss_pred EcCChh---------hhHHHHHH-HHHhcCCCeEEEEECccccCcccCcccchHHHHHHHHHHHHhhCCCeEEEEEecC-
Confidence 996422 23588998 899999999998853110 0000 01111223333444444444444456653
Q ss_pred CceeEEEEecC
Q 019550 260 DTWGWVMASDQ 270 (339)
Q Consensus 260 ~~~~~~~as~~ 270 (339)
+++.++.+.
T Consensus 201 --~G~~~~~~~ 209 (210)
T 3c3p_A 201 --NGVLLGYRL 209 (210)
T ss_dssp --TCEEEEEEC
T ss_pred --CceEEEEeC
Confidence 467777653
No 21
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.54 E-value=1.8e-13 Score=124.94 Aligned_cols=105 Identities=15% Similarity=0.190 Sum_probs=88.2
Q ss_pred CCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcC--CceeE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRN--EKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~--~~yDv 181 (339)
++++||+||||+|..+..+++..+ ..+|++||+++.+++.|++++...+. .++++++.+|+.+++.... ++||+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~---~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV---DQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC---TTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 578999999999999999998765 68999999999999999999875432 4689999999999887654 38999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
|++|...+. ...+++. +.+.|+|||++++..
T Consensus 140 V~~d~~~~~---------~~~~l~~-~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 140 IFIDADKPN---------NPHYLRW-ALRYSRPGTLIIGDN 170 (248)
T ss_dssp EEECSCGGG---------HHHHHHH-HHHTCCTTCEEEEEC
T ss_pred EEECCchHH---------HHHHHHH-HHHhcCCCeEEEEeC
Confidence 999875221 3478998 799999999998753
No 22
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.53 E-value=3.7e-13 Score=119.86 Aligned_cols=105 Identities=16% Similarity=0.202 Sum_probs=87.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc----CCc
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR----NEK 178 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~----~~~ 178 (339)
.++++||+||||+|..+..+++..+ ..+|++||+++.+++.|++++..... .++++++.+|+.+.+... .++
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~~~ 133 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL---NDRVEVRTGLALDSLQQIENEKYEP 133 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCHHHHHHHHHHTTCCC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 3578999999999999999998765 67999999999999999999875432 467999999999876542 167
Q ss_pred eeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 179 FDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 179 yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
||+|++|...+ ....+++. +.+.|+|||++++.
T Consensus 134 fD~v~~d~~~~---------~~~~~l~~-~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 134 FDFIFIDADKQ---------NNPAYFEW-ALKLSRPGTVIIGD 166 (223)
T ss_dssp CSEEEECSCGG---------GHHHHHHH-HHHTCCTTCEEEEE
T ss_pred cCEEEEcCCcH---------HHHHHHHH-HHHhcCCCcEEEEe
Confidence 99999997622 13588998 79999999999876
No 23
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.52 E-value=1.9e-13 Score=122.93 Aligned_cols=102 Identities=12% Similarity=0.202 Sum_probs=86.1
Q ss_pred eEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-CCceeEEEec
Q 019550 108 TVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-NEKFDVIFGD 185 (339)
Q Consensus 108 ~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~yDvIi~D 185 (339)
+||+||||+|..+..+++.. +..+|++||+|+++++.|++++...+. .+++++++.+|+.+++... .++||+|++|
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY--SPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC--CGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 99999999999999999853 468999999999999999999876532 1268999999999998765 5789999999
Q ss_pred CCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 186 LADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 186 ~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
..... ..++++. +.+.|+|||++++.
T Consensus 137 ~~~~~---------~~~~l~~-~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 137 VSPMD---------LKALVDA-AWPLLRRGGALVLA 162 (221)
T ss_dssp CCTTT---------HHHHHHH-HHHHEEEEEEEEET
T ss_pred CcHHH---------HHHHHHH-HHHHcCCCcEEEEe
Confidence 75321 2478998 79999999999985
No 24
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.51 E-value=2.3e-13 Score=118.41 Aligned_cols=109 Identities=16% Similarity=0.155 Sum_probs=87.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-CCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-NEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~yDvI 182 (339)
.++++|||+|||+|.++.++++ .+..+|++||+|+.+++.|++++.... -++++++.+|+.+++... .++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALS-RGAASVLFVESDQRSAAVIARNIEALG----LSGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHH-TTCSEEEEEECCHHHHHHHHHHHHHHT----CSCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHH-CCCCeEEEEECCHHHHHHHHHHHHHcC----CCceEEEEccHHHHHhhccCCCccEE
Confidence 3568999999999999998887 466799999999999999999987653 268999999999987654 5789999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHcc--ccCCCcEEEEecC
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKP--KLNDNGIFVTQAG 223 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~--~L~~gGilv~~~~ 223 (339)
++|++-.. .. -...++++. +.+ .|+|||+++++..
T Consensus 118 ~~~~p~~~--~~---~~~~~~l~~-~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 118 LADPPYNV--DS---ADVDAILAA-LGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EECCCTTS--CH---HHHHHHHHH-HHHSSSCCTTCEEEEEEE
T ss_pred EECCCCCc--ch---hhHHHHHHH-HHhcCccCCCeEEEEEec
Confidence 99986332 10 013467777 677 9999999998753
No 25
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.51 E-value=4e-14 Score=128.37 Aligned_cols=122 Identities=14% Similarity=0.082 Sum_probs=92.6
Q ss_pred hhhHHHHHhhhhcccCCCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEcc
Q 019550 88 EFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVND 167 (339)
Q Consensus 88 ~~~Y~e~l~~~~l~~~~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D 167 (339)
+..|.+.++.. ..++..+||+||||+|.++.+++++.+ .++++||++|.+++.|++++... ..+++++.+|
T Consensus 46 e~~~m~~~a~~---~~~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~-----~~~~~~~~~~ 116 (236)
T 3orh_A 46 ETPYMHALAAA---ASSKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGL 116 (236)
T ss_dssp GHHHHHHHHHH---HTTTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESC
T ss_pred HHHHHHHHHHh---hccCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhC-----CCceEEEeeh
Confidence 34455555432 235678999999999999999998765 68999999999999999987654 4689999999
Q ss_pred HHHHHHhc-CCceeEEEecCCCCCCCCccccC-CcHHHHHHHHccccCCCcEEEEe
Q 019550 168 AKAELEKR-NEKFDVIFGDLADPVEGGPCYQL-YTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 168 ~~~~l~~~-~~~yDvIi~D~~d~~~~~p~~~L-~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+.+.+... .++||.|+.|..... ....++ ....+++. ++|+|||||+|++.
T Consensus 117 a~~~~~~~~~~~FD~i~~D~~~~~--~~~~~~~~~~~~~~e-~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 117 WEDVAPTLPDGHFDGILYDTYPLS--EETWHTHQFNFIKNH-AFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHHGGGSCTTCEEEEEECCCCCB--GGGTTTHHHHHHHHT-HHHHEEEEEEEEEC
T ss_pred HHhhcccccccCCceEEEeeeecc--cchhhhcchhhhhhh-hhheeCCCCEEEEE
Confidence 98876543 478999999987432 111122 23568888 79999999999864
No 26
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.49 E-value=1.1e-13 Score=126.21 Aligned_cols=105 Identities=20% Similarity=0.295 Sum_probs=88.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-----CC
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-----NE 177 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-----~~ 177 (339)
.++++||+||||+|..+..+++..+ ..+|++||+++++++.|++++...+. .++++++.+|+.+++... .+
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~---~~~i~~~~gda~~~l~~~~~~~~~~ 135 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ---EHKIKLRLGPALDTLHSLLNEGGEH 135 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC---TTTEEEEESCHHHHHHHHHHHHCSS
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEcCHHHHHHHHhhccCCC
Confidence 3578999999999999999998654 68999999999999999999876532 468999999999987654 57
Q ss_pred ceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 178 KFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 178 ~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+||+|++|.... ....+++. +.+.|+|||++++.
T Consensus 136 ~fD~V~~d~~~~---------~~~~~l~~-~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 136 QFDFIFIDADKT---------NYLNYYEL-ALKLVTPKGLIAID 169 (242)
T ss_dssp CEEEEEEESCGG---------GHHHHHHH-HHHHEEEEEEEEEE
T ss_pred CEeEEEEcCChH---------HhHHHHHH-HHHhcCCCeEEEEE
Confidence 899999997522 13478998 79999999999885
No 27
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.49 E-value=3.8e-13 Score=119.80 Aligned_cols=104 Identities=21% Similarity=0.313 Sum_probs=86.9
Q ss_pred CCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcC-----Cc
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRN-----EK 178 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~-----~~ 178 (339)
++++||+||||+|..+..+++..+ ..+|++||+++.+++.|++++..... .++++++.+|+.+++.... ++
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL---SDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC---CCceEEEeCCHHHHHHHhhhccCCCC
Confidence 578999999999999999998654 68999999999999999999875432 4679999999998876533 78
Q ss_pred eeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 179 FDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 179 yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
||+|++|.... ....+++. +.+.|+|||++++.
T Consensus 141 fD~v~~~~~~~---------~~~~~l~~-~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 141 YDLIYIDADKA---------NTDLYYEE-SLKLLREGGLIAVD 173 (225)
T ss_dssp EEEEEECSCGG---------GHHHHHHH-HHHHEEEEEEEEEE
T ss_pred ccEEEECCCHH---------HHHHHHHH-HHHhcCCCcEEEEe
Confidence 99999987522 13478898 78999999999875
No 28
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.48 E-value=9.6e-13 Score=119.09 Aligned_cols=147 Identities=14% Similarity=0.139 Sum_probs=104.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh--cCCceeEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK--RNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~--~~~~yDvI 182 (339)
++.+|||||||+|..+..+++..+..+|++||+++++++.|+++....+ -++++++.+|+.++... ..++||+|
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ----LENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT----CSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCEEEEeccHHHhcccccccCCccEE
Confidence 5679999999999999988865567899999999999999999987543 24699999999875421 24689999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH-CCceEEEEEeecccCCc
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV-FKHVVAYTAHVPSFADT 261 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~iP~~~~~ 261 (339)
+++.... ...+++. +.+.|+|||++++..+.. ..+....+.+.+++. |..+.......|...+.
T Consensus 146 ~~~~~~~----------~~~~l~~-~~~~LkpgG~l~~~~g~~----~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 210 (240)
T 1xdz_A 146 TARAVAR----------LSVLSEL-CLPLVKKNGLFVALKAAS----AEEELNAGKKAITTLGGELENIHSFKLPIEESD 210 (240)
T ss_dssp EEECCSC----------HHHHHHH-HGGGEEEEEEEEEEECC-----CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCE
T ss_pred EEeccCC----------HHHHHHH-HHHhcCCCCEEEEEeCCC----chHHHHHHHHHHHHcCCeEeEEEEEecCCCCCc
Confidence 9987421 2588898 799999999998875432 233455566666654 32233333345643445
Q ss_pred eeEEEEecC
Q 019550 262 WGWVMASDQ 270 (339)
Q Consensus 262 ~~~~~as~~ 270 (339)
+.+++..+.
T Consensus 211 ~~l~~~~k~ 219 (240)
T 1xdz_A 211 RNIMVIRKI 219 (240)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEec
Confidence 666666553
No 29
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.47 E-value=6.5e-13 Score=119.90 Aligned_cols=149 Identities=19% Similarity=0.228 Sum_probs=103.9
Q ss_pred CCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc---C--Cc
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR---N--EK 178 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~---~--~~ 178 (339)
++++||+||||+|..+..+++..+ ..+|+++|+++++++.|++++...+. .++++++.+|+.+.+... . ++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~---~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV---AEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC---GGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 578999999999999999998654 57999999999999999999865432 368999999998877543 2 68
Q ss_pred eeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCC-Cc-c---CchhhHHHHHHHHHhHCCceEEEEE
Q 019550 179 FDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPA-GI-F---THKEVFSSIYNTIKQVFKHVVAYTA 253 (339)
Q Consensus 179 yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~-~~-~---~~~~~~~~i~~~l~~~F~~v~~~~~ 253 (339)
||+|++|...+ ...++++. +.+.|+|||++++..... +. . ........+.+..+.+..+.....+
T Consensus 149 fD~V~~d~~~~---------~~~~~l~~-~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 218 (232)
T 3cbg_A 149 FDLIFIDADKR---------NYPRYYEI-GLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRIS 218 (232)
T ss_dssp EEEEEECSCGG---------GHHHHHHH-HHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEE
T ss_pred cCEEEECCCHH---------HHHHHHHH-HHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEE
Confidence 99999997522 13578998 799999999998853210 00 0 0122233444444444444444444
Q ss_pred eecccCCceeEEEEec
Q 019550 254 HVPSFADTWGWVMASD 269 (339)
Q Consensus 254 ~iP~~~~~~~~~~as~ 269 (339)
.+|... |+.++.+
T Consensus 219 ~lp~~d---G~~~~~~ 231 (232)
T 3cbg_A 219 VIPLGD---GMTLALK 231 (232)
T ss_dssp EECSBT---CEEEEEE
T ss_pred EEEcCC---eEEEEEe
Confidence 567643 4666654
No 30
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.47 E-value=7e-13 Score=118.41 Aligned_cols=105 Identities=22% Similarity=0.295 Sum_probs=86.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcC-----C
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRN-----E 177 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~-----~ 177 (339)
.++++||+||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+. .++++++.+|+.+.+.... +
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~---~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA---EHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC---TTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC---CCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 4578999999999999999998654 68999999999999999999875432 4689999999988765431 6
Q ss_pred ceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 178 KFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 178 ~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+||+|++|+.... ..++++. +.+.|+|||++++.
T Consensus 145 ~~D~v~~d~~~~~---------~~~~l~~-~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 145 TFDVAVVDADKEN---------CSAYYER-CLQLLRPGGILAVL 178 (229)
T ss_dssp CEEEEEECSCSTT---------HHHHHHH-HHHHEEEEEEEEEE
T ss_pred CccEEEECCCHHH---------HHHHHHH-HHHHcCCCeEEEEE
Confidence 8999999876221 3578898 78999999999884
No 31
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.46 E-value=3.2e-13 Score=124.23 Aligned_cols=137 Identities=15% Similarity=0.205 Sum_probs=98.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhh---hccccCCCCeEEEEccHHHHHHh------
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTV---NQEAFCSKKLNLVVNDAKAELEK------ 174 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~---~~~~~~~~rv~v~~~D~~~~l~~------ 174 (339)
.+..+|||||||+|.++..+++..+..+|++||+++.+++.|++++.. +.. ..+++++.+|+.+++..
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l---~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF---SARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT---GGGEEEEECCTTCCHHHHHHTTC
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC---cceEEEEeCCHHHHhhhhhhhcc
Confidence 456789999999999999999877778999999999999999999875 422 34799999999887532
Q ss_pred cCCceeEEEecCCCCCCCC---c---------cccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHH
Q 019550 175 RNEKFDVIFGDLADPVEGG---P---------CYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIK 242 (339)
Q Consensus 175 ~~~~yDvIi~D~~d~~~~~---p---------~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~ 242 (339)
..++||+|++|++-....+ + .......++++. +.+.|+|||.+++... ......+.+.++
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~-------~~~~~~~~~~l~ 183 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRT-ASAIMVSGGQLSLISR-------PQSVAEIIAACG 183 (260)
T ss_dssp CTTCEEEEEECCCC---------------------CCHHHHHHH-HHHHEEEEEEEEEEEC-------GGGHHHHHHHHT
T ss_pred CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHH-HHHHcCCCCEEEEEEc-------HHHHHHHHHHHH
Confidence 2468999999976321000 0 001123578888 7999999999987532 224556777777
Q ss_pred hHCCceEEE
Q 019550 243 QVFKHVVAY 251 (339)
Q Consensus 243 ~~F~~v~~~ 251 (339)
+.|..+...
T Consensus 184 ~~~~~~~i~ 192 (260)
T 2ozv_A 184 SRFGGLEIT 192 (260)
T ss_dssp TTEEEEEEE
T ss_pred hcCCceEEE
Confidence 666555443
No 32
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.45 E-value=1.5e-12 Score=111.99 Aligned_cols=143 Identities=17% Similarity=0.245 Sum_probs=104.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||++|||+|..+..+++. ..+++++|+++.+++.+++++..... .+++++++.+|+.+.+. .++||+|+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~~~~d~~~~~~--~~~~D~v~ 124 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNL--DNYDIRVVHSDLYENVK--DRKYNKII 124 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTC--TTSCEEEEECSTTTTCT--TSCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECchhcccc--cCCceEEE
Confidence 45679999999999999999886 57999999999999999999865421 12259999999877543 46899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeecccCCcee
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWG 263 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~~~~~ 263 (339)
++++-.. +. -....+++. +.+.|+|||.+++.... ......+.+.+++.|..+..+.. ...|.
T Consensus 125 ~~~~~~~--~~---~~~~~~l~~-~~~~L~~gG~l~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~ 187 (194)
T 1dus_A 125 TNPPIRA--GK---EVLHRIIEE-GKELLKDNGEIWVVIQT------KQGAKSLAKYMKDVFGNVETVTI-----KGGYR 187 (194)
T ss_dssp ECCCSTT--CH---HHHHHHHHH-HHHHEEEEEEEEEEEES------THHHHHHHHHHHHHHSCCEEEEE-----ETTEE
T ss_pred ECCCccc--ch---hHHHHHHHH-HHHHcCCCCEEEEEECC------CCChHHHHHHHHHHhcceEEEec-----CCcEE
Confidence 9875321 11 123578888 79999999999987532 23345577888888888775431 22355
Q ss_pred EEEEec
Q 019550 264 WVMASD 269 (339)
Q Consensus 264 ~~~as~ 269 (339)
.+.+.|
T Consensus 188 ~~~~~k 193 (194)
T 1dus_A 188 VLKSKK 193 (194)
T ss_dssp EEEEEC
T ss_pred EEEEee
Confidence 555543
No 33
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.45 E-value=8.6e-13 Score=118.44 Aligned_cols=128 Identities=16% Similarity=0.197 Sum_probs=99.5
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh--cCCceeEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK--RNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~--~~~~yDvI 182 (339)
+..+||+||||+|.++..+++..+..+|++||+++.+++.|+++....+ -++++++.+|+.+.+.. ..++||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~----l~nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG----LSNLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT----CSSEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC----CCcEEEEECCHHHHHHHHcCCCChheE
Confidence 4578999999999999999987778899999999999999999876543 35799999999998764 46789999
Q ss_pred EecCCCCCCCC--ccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHh
Q 019550 183 FGDLADPVEGG--PCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQ 243 (339)
Q Consensus 183 i~D~~d~~~~~--p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~ 243 (339)
++..++|+... ....+...+|++. +++.|+|||++++.+.. ......+.+.+..
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~-~~r~LkpGG~l~i~td~------~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAEL-VKSKLQLGGVFHMATDW------EPYAEHMLEVMSS 165 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHH-HHHHEEEEEEEEEEESC------HHHHHHHHHHHHT
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHH-HHHHcCCCcEEEEEeCC------HHHHHHHHHHHHh
Confidence 99977775211 1134556789999 89999999999887532 2334445555554
No 34
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.44 E-value=1e-12 Score=118.77 Aligned_cols=106 Identities=18% Similarity=0.291 Sum_probs=86.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-------
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR------- 175 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~------- 175 (339)
.++++||+||||+|..+..+++..+ ..+|++||+++.+++.|++++..... .++++++.+|+.+++...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~---~~~v~~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL---ENKIFLKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC---GGGEEEEESCHHHHHHHHHHCSSCC
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCCEEEEECCHHHHHHHHHhhcccc
Confidence 3578999999999999999998754 67999999999999999999865432 357999999998876532
Q ss_pred --------C-CceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 176 --------N-EKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 176 --------~-~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
. ++||+|+++...+. ..++++. +.+.|+|||++++..
T Consensus 136 ~~~~~f~~~~~~fD~I~~~~~~~~---------~~~~l~~-~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLDADKEN---------YPNYYPL-ILKLLKPGGLLIADN 181 (239)
T ss_dssp GGGTTTCCSTTCEEEEEECSCGGG---------HHHHHHH-HHHHEEEEEEEEEEC
T ss_pred cccccccCCCCCcCEEEEeCCHHH---------HHHHHHH-HHHHcCCCeEEEEEc
Confidence 2 68999999854221 2478898 799999999998863
No 35
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.44 E-value=4.1e-13 Score=119.92 Aligned_cols=107 Identities=13% Similarity=0.222 Sum_probs=86.1
Q ss_pred CCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcC-----Cc
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRN-----EK 178 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~-----~~ 178 (339)
++++||+||||+|..+..+++.. +..+|++||+++.+++.|++++..... .++++++.+|+.+++.... ++
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL---QDKVTILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC---GGGEEEEESCHHHHGGGTTTTSCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC---CCceEEEECCHHHHHHHHHHhcCCCc
Confidence 57899999999999999999853 368999999999999999999876532 3579999999999887654 68
Q ss_pred eeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 179 FDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 179 yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
||+|++|..... ..-..++++. + +.|+|||++++..
T Consensus 135 fD~V~~d~~~~~------~~~~~~~~~~-~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 135 LDMVFLDHWKDR------YLPDTLLLEK-C-GLLRKGTVLLADN 170 (221)
T ss_dssp CSEEEECSCGGG------HHHHHHHHHH-T-TCCCTTCEEEESC
T ss_pred eEEEEEcCCccc------chHHHHHHHh-c-cccCCCeEEEEeC
Confidence 999999975321 1112356776 6 8999999999864
No 36
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.43 E-value=1.6e-12 Score=115.37 Aligned_cols=130 Identities=16% Similarity=0.219 Sum_probs=98.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHH-hcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELE-KRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~-~~~~~yDvI 182 (339)
.+..+||+||||+|.++..+++..+..++++||+++.+++.|++++...+ -++++++.+|+.++.. -..++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG----VPNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC----CSSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC----CCCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 34678999999999999999987777899999999999999999986543 2689999999987322 124689999
Q ss_pred EecCCCCCCCC--ccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH
Q 019550 183 FGDLADPVEGG--PCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV 244 (339)
Q Consensus 183 i~D~~d~~~~~--p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~ 244 (339)
+++.++|+... ....+...++++. +.+.|+|||++++.+.. ......+.+.+.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~------~~~~~~~~~~~~~~ 172 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDT-FKRILPENGEIHFKTDN------RGLFEYSLVSFSQY 172 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHH-HHHHSCTTCEEEEEESC------HHHHHHHHHHHHHH
T ss_pred EEECCCCccccchhhhccCCHHHHHH-HHHHcCCCcEEEEEeCC------HHHHHHHHHHHHHC
Confidence 99988775210 0123456789999 89999999999987532 23445556666654
No 37
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.43 E-value=2.4e-12 Score=113.14 Aligned_cols=127 Identities=16% Similarity=0.175 Sum_probs=98.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+|||||||+|.++..+++..+..+|++||+++.+++.|++++.... -++++++.+|+.+.+... ++||+|+
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~-~~~D~i~ 113 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV----ARNVTLVEAFAPEGLDDL-PDPDRVF 113 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT----CTTEEEEECCTTTTCTTS-CCCSEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC----CCcEEEEeCChhhhhhcC-CCCCEEE
Confidence 45679999999999999999988777899999999999999999987553 368999999987665432 6799999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEE
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAY 251 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~ 251 (339)
++.... ...++++. +.+.|+|||.+++... .......+.+.+++..-.+...
T Consensus 114 ~~~~~~---------~~~~~l~~-~~~~LkpgG~l~~~~~------~~~~~~~~~~~l~~~g~~~~~~ 165 (204)
T 3e05_A 114 IGGSGG---------MLEEIIDA-VDRRLKSEGVIVLNAV------TLDTLTKAVEFLEDHGYMVEVA 165 (204)
T ss_dssp ESCCTT---------CHHHHHHH-HHHHCCTTCEEEEEEC------BHHHHHHHHHHHHHTTCEEEEE
T ss_pred ECCCCc---------CHHHHHHH-HHHhcCCCeEEEEEec------ccccHHHHHHHHHHCCCceeEE
Confidence 997643 13588998 7999999999998642 2334556667777664344443
No 38
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.43 E-value=3.8e-13 Score=117.89 Aligned_cols=154 Identities=13% Similarity=0.108 Sum_probs=88.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh---cCCcee
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK---RNEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~---~~~~yD 180 (339)
.++.+||++|||+|.++..+++..+..+++++|+++.+++.|++++.... .+++++.+|+.+.+.. ..++||
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG-----AVVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC-----CceEEEEcchHhhhhhhhhccCccc
Confidence 56789999999999999999998767799999999999999999886542 2789999999987654 247899
Q ss_pred EEEecCCCCCCCC------------ccccCC--------cHHHHHHHHccccCCCcE-EEEecCCCCccCchhhHHHHHH
Q 019550 181 VIFGDLADPVEGG------------PCYQLY--------TKSFYERILKPKLNDNGI-FVTQAGPAGIFTHKEVFSSIYN 239 (339)
Q Consensus 181 vIi~D~~d~~~~~------------p~~~L~--------t~ef~~~~~~~~L~~gGi-lv~~~~~~~~~~~~~~~~~i~~ 239 (339)
+|++|++-..... |...+. -..+++. +++.|+|||+ +++... ....+.+..+.+
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~----~~~~~~~~~~l~ 178 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAAL-PPYVLARGRAGVFLEVG----HNQADEVARLFA 178 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTC-CGGGBCSSSEEEEEECT----TSCHHHHHHHTG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHH-HHHHhcCCCeEEEEEEC----CccHHHHHHHHH
Confidence 9999986311000 000000 0677888 7899999999 666543 122333333333
Q ss_pred HHHhHCCceEEEEEeecccCCceeEEEEecCC
Q 019550 240 TIKQVFKHVVAYTAHVPSFADTWGWVMASDQP 271 (339)
Q Consensus 240 ~l~~~F~~v~~~~~~iP~~~~~~~~~~as~~p 271 (339)
.++.-|..+..+ +.+.+...++++.+..
T Consensus 179 ~~~~gf~~~~~~----~~~~~~~r~~~~~~~~ 206 (215)
T 4dzr_A 179 PWRERGFRVRKV----KDLRGIDRVIAVTREP 206 (215)
T ss_dssp GGGGGTEECCEE----ECTTSCEEEEEEEECC
T ss_pred HhhcCCceEEEE----EecCCCEEEEEEEEcC
Confidence 223446555433 3344445677776643
No 39
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.43 E-value=4.1e-12 Score=116.28 Aligned_cols=147 Identities=18% Similarity=0.213 Sum_probs=105.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh--cCCceeE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK--RNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~--~~~~yDv 181 (339)
..+.+|||||||+|..+..++...+..+|++||+++++++.++++....+ -.+++++.+|+.++... ..++||+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----l~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG----LKGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT----CSSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC----CCceEEEECcHHHhhcccccCCCceE
Confidence 35689999999999999998887778899999999999999999987553 24699999999876532 2478999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH-CCceEEEEEeecccCC
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV-FKHVVAYTAHVPSFAD 260 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~iP~~~~ 260 (339)
|++....+ -..+++. +.+.|+|||.+++..+.. ..+....+.+.++.. |.........+|....
T Consensus 155 I~s~a~~~----------~~~ll~~-~~~~LkpgG~l~~~~g~~----~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~ 219 (249)
T 3g89_A 155 AVARAVAP----------LCVLSEL-LLPFLEVGGAAVAMKGPR----VEEELAPLPPALERLGGRLGEVLALQLPLSGE 219 (249)
T ss_dssp EEEESSCC----------HHHHHHH-HGGGEEEEEEEEEEECSC----CHHHHTTHHHHHHHHTEEEEEEEEEECTTTCC
T ss_pred EEECCcCC----------HHHHHHH-HHHHcCCCeEEEEEeCCC----cHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCC
Confidence 99986522 2478888 799999999988765432 233445555666554 3333344445675444
Q ss_pred ceeEEEEec
Q 019550 261 TWGWVMASD 269 (339)
Q Consensus 261 ~~~~~~as~ 269 (339)
...+++..+
T Consensus 220 ~R~l~~~~k 228 (249)
T 3g89_A 220 ARHLVVLEK 228 (249)
T ss_dssp EEEEEEEEE
T ss_pred cEEEEEEEe
Confidence 344444444
No 40
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.42 E-value=4.4e-13 Score=114.99 Aligned_cols=109 Identities=17% Similarity=0.239 Sum_probs=87.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++++||++|||+|..+..+++. +..+|++||+|+.+++.|++++..... .++++++.+|+.+++....++||+|+
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~fD~i~ 105 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKA---ENRFTLLKMEAERAIDCLTGRFDLVF 105 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTC---GGGEEEECSCHHHHHHHBCSCEEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCC---CCceEEEECcHHHhHHhhcCCCCEEE
Confidence 45679999999999999999885 567999999999999999999865432 35799999999998876667899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHc--cccCCCcEEEEecCC
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILK--PKLNDNGIFVTQAGP 224 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~--~~L~~gGilv~~~~~ 224 (339)
+|++-.. ....++++. +. +.|+|||++++....
T Consensus 106 ~~~~~~~-------~~~~~~~~~-l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 106 LDPPYAK-------ETIVATIEA-LAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp ECCSSHH-------HHHHHHHHH-HHHTTCEEEEEEEEEEEET
T ss_pred ECCCCCc-------chHHHHHHH-HHhCCCcCCCcEEEEEECC
Confidence 9965210 113467777 55 899999999987643
No 41
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.41 E-value=2.8e-12 Score=109.46 Aligned_cols=124 Identities=21% Similarity=0.184 Sum_probs=94.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++..+..+|+++|+++.+++.|++++..... ..++ ++.+|+.+.+....++||+|+
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~-~~~~d~~~~~~~~~~~~D~i~ 99 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV---SDRI-AVQQGAPRAFDDVPDNPDVIF 99 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC---TTSE-EEECCTTGGGGGCCSCCSEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC---CCCE-EEecchHhhhhccCCCCCEEE
Confidence 345689999999999999999877778999999999999999999865432 2478 888998776665447899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCce
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHV 248 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v 248 (339)
++..... ..+++. +.+.|+|||.+++.... ......+.+.+++....+
T Consensus 100 ~~~~~~~----------~~~l~~-~~~~L~~gG~l~~~~~~------~~~~~~~~~~~~~~~~~~ 147 (178)
T 3hm2_A 100 IGGGLTA----------PGVFAA-AWKRLPVGGRLVANAVT------VESEQMLWALRKQFGGTI 147 (178)
T ss_dssp ECC-TTC----------TTHHHH-HHHTCCTTCEEEEEECS------HHHHHHHHHHHHHHCCEE
T ss_pred ECCcccH----------HHHHHH-HHHhcCCCCEEEEEeec------cccHHHHHHHHHHcCCee
Confidence 8765321 477888 79999999999987532 233445566666665444
No 42
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.41 E-value=5.2e-13 Score=125.25 Aligned_cols=103 Identities=11% Similarity=0.206 Sum_probs=82.1
Q ss_pred CCCCCeEEEEecchhHHH-HHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 103 HQNPKTVFIMGGGEGSAA-REALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 103 ~~~p~~VL~IG~G~G~~~-~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
..++.+||+||||+|.++ ..+++ .+..+|++||+|+++++.||+++...+ -.+++++.+|+.++ . .++||+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~-~~ga~V~gIDis~~~l~~Ar~~~~~~g----l~~v~~v~gDa~~l-~--d~~FDv 191 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSH-VYGMRVNVVEIEPDIAELSRKVIEGLG----VDGVNVITGDETVI-D--GLEFDV 191 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHH-TTCCEEEEEESSHHHHHHHHHHHHHHT----CCSEEEEESCGGGG-G--GCCCSE
T ss_pred CCCcCEEEEECCCccHHHHHHHHH-ccCCEEEEEECCHHHHHHHHHHHHhcC----CCCeEEEECchhhC-C--CCCcCE
Confidence 356889999999987655 44444 446899999999999999999987543 26899999999874 2 578999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
|+++..-+ -..++++. +.+.|+|||++++...
T Consensus 192 V~~~a~~~---------d~~~~l~e-l~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 192 LMVAALAE---------PKRRVFRN-IHRYVDTETRIIYRTY 223 (298)
T ss_dssp EEECTTCS---------CHHHHHHH-HHHHCCTTCEEEEEEC
T ss_pred EEECCCcc---------CHHHHHHH-HHHHcCCCcEEEEEcC
Confidence 99976522 13588999 8999999999998753
No 43
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.40 E-value=3.5e-12 Score=121.76 Aligned_cols=148 Identities=11% Similarity=0.119 Sum_probs=99.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc---CCcee
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR---NEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~---~~~yD 180 (339)
.++++||++|||+|.++..+++. +. +|++||+|+.+++.|++++..+.. ++.+++++.+|+.+++... .++||
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~-ga-~V~~VD~s~~al~~a~~n~~~~gl--~~~~v~~i~~D~~~~l~~~~~~~~~fD 227 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA-GA-EVTHVDASKKAIGWAKENQVLAGL--EQAPIRWICEDAMKFIQREERRGSTYD 227 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-TC-EEEEECSCHHHHHHHHHHHHHHTC--TTSCEEEECSCHHHHHHHHHHHTCCBS
T ss_pred CCCCcEEEcccccCHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECcHHHHHHHHHhcCCCce
Confidence 35679999999999999999984 44 999999999999999999876542 2336999999999988642 56899
Q ss_pred EEEecCCC-CCCCCccccCC-----cHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHH-HHHhHCCceEEEEE
Q 019550 181 VIFGDLAD-PVEGGPCYQLY-----TKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYN-TIKQVFKHVVAYTA 253 (339)
Q Consensus 181 vIi~D~~d-~~~~~p~~~L~-----t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~-~l~~~F~~v~~~~~ 253 (339)
+|++|++. .. .+...++ ..++++. +.+.|+|||++++...... ......+..+++ ++++....+.....
T Consensus 228 ~Ii~dPP~~~~--~~~~~~~~~~~~~~~ll~~-~~~~LkpgG~lli~~~~~~-~~~~~~~~~~l~~a~~~~g~~v~~~e~ 303 (332)
T 2igt_A 228 IILTDPPKFGR--GTHGEVWQLFDHLPLMLDI-CREILSPKALGLVLTAYSI-RASFYSMHELMRETMRGAGGVVASGEL 303 (332)
T ss_dssp EEEECCCSEEE--CTTCCEEEHHHHHHHHHHH-HHHTBCTTCCEEEEEECCT-TSCHHHHHHHHHHHTTTSCSEEEEEEE
T ss_pred EEEECCccccC--CchHHHHHHHHHHHHHHHH-HHHhcCcCcEEEEEECCCC-CCCHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 99999973 11 1101111 2477887 7899999999665543221 123333433333 33344444544444
Q ss_pred eecccC
Q 019550 254 HVPSFA 259 (339)
Q Consensus 254 ~iP~~~ 259 (339)
..|..+
T Consensus 304 ~~p~~~ 309 (332)
T 2igt_A 304 VIREAG 309 (332)
T ss_dssp EEECCC
T ss_pred ecccCC
Confidence 556543
No 44
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.40 E-value=4.3e-12 Score=113.05 Aligned_cols=129 Identities=11% Similarity=0.169 Sum_probs=98.4
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVIF 183 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvIi 183 (339)
+..+||+||||+|.++..+++..+..++++||+++.+++.|+++....+ -++++++.+|+.+.... ..+.||.|+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~----~~nv~~~~~d~~~l~~~~~~~~~d~v~ 113 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE----AQNVKLLNIDADTLTDVFEPGEVKRVY 113 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC----CSSEEEECCCGGGHHHHCCTTSCCEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC----CCCEEEEeCCHHHHHhhcCcCCcCEEE
Confidence 4678999999999999999987777899999999999999999876542 36799999999874322 246799999
Q ss_pred ecCCCCCCCC--ccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH
Q 019550 184 GDLADPVEGG--PCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV 244 (339)
Q Consensus 184 ~D~~d~~~~~--p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~ 244 (339)
+..++|+... ....+...++++. +++.|+|||.+++.+. .......+.+.+.+.
T Consensus 114 ~~~~~p~~~~~~~~~rl~~~~~l~~-~~~~LkpgG~l~~~td------~~~~~~~~~~~~~~~ 169 (213)
T 2fca_A 114 LNFSDPWPKKRHEKRRLTYSHFLKK-YEEVMGKGGSIHFKTD------NRGLFEYSLKSFSEY 169 (213)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHH-HHHHHTTSCEEEEEES------CHHHHHHHHHHHHHH
T ss_pred EECCCCCcCccccccccCcHHHHHH-HHHHcCCCCEEEEEeC------CHHHHHHHHHHHHHC
Confidence 9888775211 0123556899999 8999999999998753 223444555666554
No 45
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.39 E-value=3.6e-12 Score=116.70 Aligned_cols=128 Identities=13% Similarity=0.149 Sum_probs=93.6
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-CCceeEEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-NEKFDVIF 183 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~yDvIi 183 (339)
++.+|||||||+|.++..+++..+ .+|++||+++.+++.|++++..+.. ..+++++.+|+.++.... .++||+|+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~~---~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQL---EDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTTC---TTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCCC---cccEEEEECcHHHhhhhhccCCccEEE
Confidence 578999999999999999998644 4999999999999999999876542 468999999998876433 57899999
Q ss_pred ecCCCCCC-----CCcc--c-------cCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH
Q 019550 184 GDLADPVE-----GGPC--Y-------QLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV 244 (339)
Q Consensus 184 ~D~~d~~~-----~~p~--~-------~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~ 244 (339)
+|++--.. ..+. . .....++++. +.+.|+|||.+++-.. ......+...+++.
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~-------~~~~~~~~~~l~~~ 191 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRV-AASLLKQGGKANFVHR-------PERLLDIIDIMRKY 191 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHH-HHHHEEEEEEEEEEEC-------TTTHHHHHHHHHHT
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHH-HHHHccCCcEEEEEEc-------HHHHHHHHHHHHHC
Confidence 99862110 0000 0 0112468888 7999999999988432 22345566667664
No 46
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.38 E-value=1e-11 Score=114.75 Aligned_cols=147 Identities=15% Similarity=0.212 Sum_probs=103.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++....+ -++++++.+|+.+.+. .++||+|+
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~----~~~v~~~~~d~~~~~~--~~~fD~Iv 181 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLA----IKNIHILQSDWFSALA--GQQFAMIV 181 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHT----CCSEEEECCSTTGGGT--TCCEEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEEcchhhhcc--cCCccEEE
Confidence 35679999999999999999977777899999999999999999987553 2579999999877543 46899999
Q ss_pred ecCCCCCC-----------CCccccC--------CcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH
Q 019550 184 GDLADPVE-----------GGPCYQL--------YTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV 244 (339)
Q Consensus 184 ~D~~d~~~-----------~~p~~~L--------~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~ 244 (339)
++++-... ..|...+ ....+++. +.+.|+|||++++..+. ... ..+.+.+++.
T Consensus 182 ~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~-~~~~LkpgG~l~~~~~~----~~~---~~~~~~l~~~ 253 (276)
T 2b3t_A 182 SNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQ-SRNALVSGGFLLLEHGW----QQG---EAVRQAFILA 253 (276)
T ss_dssp ECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHH-HGGGEEEEEEEEEECCS----SCH---HHHHHHHHHT
T ss_pred ECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHH-HHHhcCCCCEEEEEECc----hHH---HHHHHHHHHC
Confidence 99763210 0111111 12577888 79999999999987542 222 2344445544
Q ss_pred -CCceEEEEEeecccCCceeEEEEe
Q 019550 245 -FKHVVAYTAHVPSFADTWGWVMAS 268 (339)
Q Consensus 245 -F~~v~~~~~~iP~~~~~~~~~~as 268 (339)
|..+..+ +.+.+...+++|.
T Consensus 254 Gf~~v~~~----~d~~g~~r~~~~~ 274 (276)
T 2b3t_A 254 GYHDVETC----RDYGDNERVTLGR 274 (276)
T ss_dssp TCTTCCEE----ECTTSSEEEEEEE
T ss_pred CCcEEEEE----ecCCCCCcEEEEE
Confidence 6555443 2344555666664
No 47
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.38 E-value=2.7e-12 Score=112.71 Aligned_cols=141 Identities=11% Similarity=0.118 Sum_probs=99.0
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
+..+||+||||+|..+..+++..+..+++++|+++.+++.+++++.... -++++++.+|+.++. ..++||+|++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~--~~~~~D~i~~ 138 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK----LENIEPVQSRVEEFP--SEPPFDGVIS 138 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT----CSSEEEEECCTTTSC--CCSCEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEecchhhCC--ccCCcCEEEE
Confidence 3679999999999999999987777899999999999999999986542 245999999987653 2468999998
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeecccCCceeE
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGW 264 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~~~~~~ 264 (339)
+...+ ...+++. +++.|+|||.+++..+.. ..+.+..+. +-|..+.......|.+++...+
T Consensus 139 ~~~~~----------~~~~l~~-~~~~L~~gG~l~~~~~~~----~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~ 199 (207)
T 1jsx_A 139 RAFAS----------LNDMVSW-CHHLPGEQGRFYALKGQM----PEDEIALLP----EEYQVESVVKLQVPALDGERHL 199 (207)
T ss_dssp SCSSS----------HHHHHHH-HTTSEEEEEEEEEEESSC----CHHHHHTSC----TTEEEEEEEEEECC--CCEEEE
T ss_pred eccCC----------HHHHHHH-HHHhcCCCcEEEEEeCCC----chHHHHHHh----cCCceeeeeeeccCCCCCceEE
Confidence 75421 2478898 899999999999875431 222222221 1343333332345665555566
Q ss_pred EEEecC
Q 019550 265 VMASDQ 270 (339)
Q Consensus 265 ~~as~~ 270 (339)
+++.+.
T Consensus 200 ~~~~k~ 205 (207)
T 1jsx_A 200 VVIKAN 205 (207)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 666654
No 48
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.38 E-value=1.8e-12 Score=117.75 Aligned_cols=125 Identities=14% Similarity=0.208 Sum_probs=98.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhc-CCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKH-KSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.++.+||++|||+|.++..+++. .+..+|+++|+++.+++.|++++..... .++++++.+|+.+.+ ..++||+|
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~--~~~~~D~v 166 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF---DDRVTIKLKDIYEGI--EEENVDHV 166 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC---TTTEEEECSCGGGCC--CCCSEEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC---CCceEEEECchhhcc--CCCCcCEE
Confidence 45679999999999999999987 5678999999999999999999875532 356999999998653 24679999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH---CCceEEE
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV---FKHVVAY 251 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~---F~~v~~~ 251 (339)
++|++++. ++++. +.+.|+|||.+++... ..+....+.+.+++. |..+..+
T Consensus 167 ~~~~~~~~-----------~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 167 ILDLPQPE-----------RVVEH-AAKALKPGGFFVAYTP------CSNQVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp EECSSCGG-----------GGHHH-HHHHEEEEEEEEEEES------SHHHHHHHHHHHHHTGGGBSCCEEE
T ss_pred EECCCCHH-----------HHHHH-HHHHcCCCCEEEEEEC------CHHHHHHHHHHHHHcCCCccccEEE
Confidence 99877542 56788 7899999999998642 223455667777765 7666654
No 49
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.37 E-value=7.4e-13 Score=123.01 Aligned_cols=130 Identities=15% Similarity=0.095 Sum_probs=99.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+.++|||+|||+|.++..+++... .+|++||+++.+++.|++++..++. .++++++.+|+.+++. .++||+|+
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~-~~V~~vD~s~~~~~~a~~n~~~n~~---~~~v~~~~~D~~~~~~--~~~fD~Vi 197 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLNKV---EDRMSAYNMDNRDFPG--ENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHTTC---TTTEEEECSCTTTCCC--CSCEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEECCHHHhcc--cCCccEEE
Confidence 3467999999999999999998643 4899999999999999999876643 3579999999988765 57899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEE
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVA 250 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~ 250 (339)
+|++.. ..++++. +.+.|+|||++++...++......+.+..+.+.+++....+..
T Consensus 198 ~~~p~~----------~~~~l~~-~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 198 MGYVVR----------THEFIPK-ALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ECCCSS----------GGGGHHH-HHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ECCchh----------HHHHHHH-HHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 987622 2467888 7899999999988654321112234566777777777665554
No 50
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.37 E-value=7.9e-12 Score=111.59 Aligned_cols=136 Identities=18% Similarity=0.162 Sum_probs=97.2
Q ss_pred CCCCeEEEEecc-hhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGG-EGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G-~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
++..+||||||| +|.++..+++.. ..+|+++|+|+.+++.|++++.... .+++++.+|+..+.....++||+|
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNN-----SNVRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTT-----CCCEEEECSSCSSTTTCCSCEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhC-----CCcEEEeCCchhhhhcccCceeEE
Confidence 457899999999 999999998864 5799999999999999999987652 389999999643322234789999
Q ss_pred EecCCCCCCC-----Ccc--------ccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceE
Q 019550 183 FGDLADPVEG-----GPC--------YQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVV 249 (339)
Q Consensus 183 i~D~~d~~~~-----~p~--------~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~ 249 (339)
+++++-.... .+. ..-....+++. +.+.|+|||.+++.... .......+.+.+++..-.+.
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~-----~~~~~~~~~~~l~~~g~~~~ 201 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEE-AFDHLNPGGKVALYLPD-----KEKLLNVIKERGIKLGYSVK 201 (230)
T ss_dssp EECCCCC---------------CCSSSCHHHHHHHHH-HGGGEEEEEEEEEEEES-----CHHHHHHHHHHHHHTTCEEE
T ss_pred EECCCCcCCccccccChhhhhccCccchHHHHHHHHH-HHHHhCCCeEEEEEecc-----cHhHHHHHHHHHHHcCCceE
Confidence 9997631100 000 00012688998 79999999999885421 22445677777777755554
Q ss_pred EE
Q 019550 250 AY 251 (339)
Q Consensus 250 ~~ 251 (339)
..
T Consensus 202 ~~ 203 (230)
T 3evz_A 202 DI 203 (230)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 51
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.37 E-value=2.6e-12 Score=110.55 Aligned_cols=107 Identities=18% Similarity=0.287 Sum_probs=85.1
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc---CCceeE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR---NEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~---~~~yDv 181 (339)
++++||++|||+|.++.++++ .+..+|++||+|+.+++.|++++..... .++++++.+|+.+++... .++||+
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKE---PEKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTC---GGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCC---CcceEEEECcHHHHHHHHHhcCCCCCE
Confidence 567999999999999998887 4567999999999999999999875531 358999999999876532 578999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHH--ccccCCCcEEEEecC
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERIL--KPKLNDNGIFVTQAG 223 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~--~~~L~~gGilv~~~~ 223 (339)
|++|++-.. ....++++. + .+.|+|||++++...
T Consensus 120 i~~~~~~~~-------~~~~~~~~~-l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 120 VLLDPPYAK-------QEIVSQLEK-MLERQLLTNEAVIVCETD 155 (187)
T ss_dssp EEECCCGGG-------CCHHHHHHH-HHHTTCEEEEEEEEEEEE
T ss_pred EEECCCCCc-------hhHHHHHHH-HHHhcccCCCCEEEEEeC
Confidence 999976211 113456666 6 789999999998754
No 52
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.37 E-value=2.3e-12 Score=113.79 Aligned_cols=106 Identities=16% Similarity=0.180 Sum_probs=84.2
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
+..+|||+|||+|.++.++++. +..+|++||+|+.+++.|++++.... -++++++.+|+.+++....++||+|++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~-~~~~V~~vD~s~~~l~~a~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR-YAAGATLIEMDRAVSQQLIKNLATLK----AGNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHHHHTT----CCSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhc-CCCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 4579999999999999987764 45699999999999999999987653 268999999999988655678999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHc--cccCCCcEEEEecC
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILK--PKLNDNGIFVTQAG 223 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~--~~L~~gGilv~~~~ 223 (339)
|++-.. + ...++++. +. +.|+|||++++...
T Consensus 129 ~~p~~~--~-----~~~~~l~~-l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 129 DPPFRR--G-----LLEETINL-LEDNGWLADEALIYVESE 161 (202)
T ss_dssp CCSSST--T-----THHHHHHH-HHHTTCEEEEEEEEEEEE
T ss_pred CCCCCC--C-----cHHHHHHH-HHhcCccCCCcEEEEEEC
Confidence 987221 1 13466776 54 35999999988753
No 53
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.36 E-value=1.6e-12 Score=116.84 Aligned_cols=104 Identities=19% Similarity=0.297 Sum_probs=87.6
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc--CCceeEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR--NEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~yDvI 182 (339)
++++||+||||+|..+..+++..+..+|+++|+++.+++.|++++..... .++++++.+|+.+.+... .++||+|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL---ESRIELLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC---TTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEECCHHHHHHhcccCCCccEE
Confidence 56799999999999999999877678999999999999999999875432 368999999998876554 5789999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+++...+ ...++++. +.+.|+|||++++.
T Consensus 131 ~~~~~~~---------~~~~~l~~-~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 131 FIDAAKG---------QYRRFFDM-YSPMVRPGGLILSD 159 (233)
T ss_dssp EEEGGGS---------CHHHHHHH-HGGGEEEEEEEEEE
T ss_pred EECCCHH---------HHHHHHHH-HHHHcCCCeEEEEE
Confidence 9987632 13588998 79999999999886
No 54
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.35 E-value=5.4e-12 Score=110.81 Aligned_cols=138 Identities=21% Similarity=0.259 Sum_probs=99.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++. +..+|+++|+++.+++.|++++.... -++++++.+|+.++. .++||+|+
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~---~~~fD~i~ 130 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNG----IYDIALQKTSLLADV---DGKFDLIV 130 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT----CCCCEEEESSTTTTC---CSCEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEeccccccC---CCCceEEE
Confidence 45689999999999999998874 66799999999999999999987553 234999999987643 47899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH-CCceEEEEEeecccCCce
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV-FKHVVAYTAHVPSFADTW 262 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~iP~~~~~~ 262 (339)
++.+.. . ...+++. +.+.|+|||.+++..- .......+.+.+++. |..+.... .+.|
T Consensus 131 ~~~~~~-------~--~~~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~~~~~Gf~~~~~~~------~~~w 188 (205)
T 3grz_A 131 ANILAE-------I--LLDLIPQ-LDSHLNEDGQVIFSGI------DYLQLPKIEQALAENSFQIDLKMR------AGRW 188 (205)
T ss_dssp EESCHH-------H--HHHHGGG-SGGGEEEEEEEEEEEE------EGGGHHHHHHHHHHTTEEEEEEEE------ETTE
T ss_pred ECCcHH-------H--HHHHHHH-HHHhcCCCCEEEEEec------CcccHHHHHHHHHHcCCceEEeec------cCCE
Confidence 986521 1 2577888 7899999999988531 122345566666665 43333221 2447
Q ss_pred eEEEEecCC
Q 019550 263 GWVMASDQP 271 (339)
Q Consensus 263 ~~~~as~~p 271 (339)
..++..+.+
T Consensus 189 ~~~~~~~~~ 197 (205)
T 3grz_A 189 IGLAISRKH 197 (205)
T ss_dssp EEEEEEECC
T ss_pred EEEEEeccc
Confidence 666665544
No 55
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.35 E-value=1.4e-11 Score=109.01 Aligned_cols=121 Identities=16% Similarity=0.148 Sum_probs=93.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+|||||||+|.++.++++. ..+|++||+++++++.|++++..... ..+++++.+|+.+.+... ++||+|+
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~---~~~v~~~~~d~~~~~~~~-~~~D~v~ 127 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGL---SPRMRAVQGTAPAALADL-PLPEAVF 127 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCTTGGGTTS-CCCSEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCC---CCCEEEEeCchhhhcccC-CCCCEEE
Confidence 45678999999999999999986 57999999999999999999765432 238999999998865433 5799999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCce
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHV 248 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v 248 (339)
++... ..++++. +.+.|+|||++++... ..+....+.+.+++....+
T Consensus 128 ~~~~~-----------~~~~l~~-~~~~LkpgG~lv~~~~------~~~~~~~~~~~l~~~g~~i 174 (204)
T 3njr_A 128 IGGGG-----------SQALYDR-LWEWLAPGTRIVANAV------TLESETLLTQLHARHGGQL 174 (204)
T ss_dssp ECSCC-----------CHHHHHH-HHHHSCTTCEEEEEEC------SHHHHHHHHHHHHHHCSEE
T ss_pred ECCcc-----------cHHHHHH-HHHhcCCCcEEEEEec------CcccHHHHHHHHHhCCCcE
Confidence 87631 1238888 7999999999998753 2345666777777765433
No 56
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.34 E-value=2.7e-12 Score=113.33 Aligned_cols=108 Identities=20% Similarity=0.249 Sum_probs=84.5
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCc-eeEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEK-FDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~-yDvI 182 (339)
+..+|||+|||+|.++.++++. +..+|++||+|+.+++.|++++...+. ..++++++.+|+.+++.. ..++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR-QAKKVTFLELDKTVANQLKKNLQTLKC--SSEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHHHHTTC--CTTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHHhCC--CccceEEEECCHHHHHHhhccCCCCCEE
Confidence 4679999999999999987764 457999999999999999999875431 126899999999988654 2467 9999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHH--ccccCCCcEEEEecC
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERIL--KPKLNDNGIFVTQAG 223 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~--~~~L~~gGilv~~~~ 223 (339)
++|++-.. + ...++++. + .+.|+|||++++...
T Consensus 130 ~~~~~~~~--~-----~~~~~l~~-~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 130 FLDPPFHF--N-----LAEQAISL-LCENNWLKPNALIYVETE 164 (201)
T ss_dssp EECCCSSS--C-----HHHHHHHH-HHHTTCEEEEEEEEEEEE
T ss_pred EECCCCCC--c-----cHHHHHHH-HHhcCccCCCcEEEEEEC
Confidence 99987211 1 13467777 6 568999999988754
No 57
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.34 E-value=1.7e-12 Score=119.68 Aligned_cols=108 Identities=15% Similarity=0.230 Sum_probs=82.6
Q ss_pred CCCCCeEEEEecchhHHHHHHHhcC--CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCcee
Q 019550 103 HQNPKTVFIMGGGEGSAAREALKHK--SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFD 180 (339)
Q Consensus 103 ~~~p~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yD 180 (339)
.++..+||+||||+|..+..+++.. +..+|++||+++.+++.||+++..... ..+++++.+|+.++ ..+.||
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~---~~~v~~~~~D~~~~---~~~~~d 141 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA---PTPVDVIEGDIRDI---AIENAS 141 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC---SSCEEEEESCTTTC---CCCSEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc---CceEEEeecccccc---cccccc
Confidence 3556799999999999999998753 456899999999999999999764432 46899999998653 236799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+|++...-.. -+. --...+++. +++.|+|||+|++.
T Consensus 142 ~v~~~~~l~~--~~~--~~~~~~l~~-i~~~LkpGG~lii~ 177 (261)
T 4gek_A 142 MVVLNFTLQF--LEP--SERQALLDK-IYQGLNPGGALVLS 177 (261)
T ss_dssp EEEEESCGGG--SCH--HHHHHHHHH-HHHHEEEEEEEEEE
T ss_pred cceeeeeeee--cCc--hhHhHHHHH-HHHHcCCCcEEEEE
Confidence 9998765221 110 012368899 79999999999875
No 58
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.34 E-value=3.2e-12 Score=108.21 Aligned_cols=103 Identities=17% Similarity=0.190 Sum_probs=82.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc---CCceeE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR---NEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~---~~~yDv 181 (339)
+.++||++|||+|..+..++++. .+|++||+|+.+++.|++++.... -+++++.+|+.+++... .++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG--WEAVLVEKDPEAVRLLKENVRRTG-----LGARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT--CEEEEECCCHHHHHHHHHHHHHHT-----CCCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHHHcC-----CceEEEeccHHHHHHhhhccCCceEE
Confidence 56799999999999999999853 349999999999999999987652 28999999999876532 347999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHc--cccCCCcEEEEecC
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILK--PKLNDNGIFVTQAG 223 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~--~~L~~gGilv~~~~ 223 (339)
|+++++-.. ...++++. +. +.|+|||++++...
T Consensus 114 i~~~~~~~~--------~~~~~~~~-~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 114 AFMAPPYAM--------DLAALFGE-LLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp EEECCCTTS--------CTTHHHHH-HHHHTCEEEEEEEEEEEE
T ss_pred EEECCCCch--------hHHHHHHH-HHhhcccCCCcEEEEEeC
Confidence 999975321 12367777 67 89999999998764
No 59
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.34 E-value=5.7e-12 Score=114.36 Aligned_cols=133 Identities=14% Similarity=0.112 Sum_probs=94.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhc--cccCCCCeEEEEccHHHHHHh--cCCce
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQ--EAFCSKKLNLVVNDAKAELEK--RNEKF 179 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~--~~~~~~rv~v~~~D~~~~l~~--~~~~y 179 (339)
.+..+||+||||+|.++..+++..+..++++||+++.+++.|++.+.... .....++++++.+|+.+++.. ..++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 34568999999999999999987778899999999999999998764310 001246899999999876652 35789
Q ss_pred eEEEecCCCCCCC--CccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHh
Q 019550 180 DVIFGDLADPVEG--GPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQ 243 (339)
Q Consensus 180 DvIi~D~~d~~~~--~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~ 243 (339)
|.|++..++|+.. .....+....+++. +++.|+|||.+++.+. .......+.+.+.+
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~-~~~~LkpGG~l~~~td------~~~~~~~~~~~l~~ 183 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAE-YAYVLRVGGLVYTITD------VLELHDWMCTHFEE 183 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHH-HHHHEEEEEEEEEEES------CHHHHHHHHHHHHT
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHH-HHHHCCCCCEEEEEeC------CHHHHHHHHHHHHH
Confidence 9999988877521 01123455789999 8999999999998753 22344445555543
No 60
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.34 E-value=9.2e-12 Score=107.45 Aligned_cols=112 Identities=13% Similarity=0.083 Sum_probs=81.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
++..+|||||||+|..+..+++. ..+|++||+++.+++.|++++...+ -++++++.+|........+++||+|+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~----~~~v~~~~~~~~~l~~~~~~~fD~v~ 94 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLG----IENTELILDGHENLDHYVREPIRAAI 94 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHT----CCCEEEEESCGGGGGGTCCSCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEeCcHHHHHhhccCCcCEEE
Confidence 45679999999999999999985 5799999999999999999987543 26899999877653223357899999
Q ss_pred ecCC-CCCCCCcc--ccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLA-DPVEGGPC--YQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~-d~~~~~p~--~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+++. -+...... ..-....+++. +.+.|+|||.+++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 95 FNLGYLPSADKSVITKPHTTLEAIEK-ILDRLEVGGRLAIMI 135 (185)
T ss_dssp EEEC-----------CHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeCCCCCCcchhcccChhhHHHHHHH-HHHhcCCCcEEEEEE
Confidence 9852 11100000 00112367788 789999999987754
No 61
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.32 E-value=4.4e-11 Score=102.62 Aligned_cols=125 Identities=18% Similarity=0.164 Sum_probs=96.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||++|||+|..+..+++.. .+++++|+++.+++.+++++..... .++++++.+|+.+.+... ++||+|+
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~~~~-~~~D~v~ 105 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGL---GDNVTLMEGDAPEALCKI-PDIDIAV 105 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTC---CTTEEEEESCHHHHHTTS-CCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCC---CcceEEEecCHHHhcccC-CCCCEEE
Confidence 456799999999999999998854 7999999999999999998865431 368999999998866432 5899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH-CCceEEE
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV-FKHVVAY 251 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~-F~~v~~~ 251 (339)
++..... ..++++. +.+.|+|||.+++... .......+.+.+++. | .+...
T Consensus 106 ~~~~~~~---------~~~~l~~-~~~~l~~gG~l~~~~~------~~~~~~~~~~~l~~~g~-~~~~~ 157 (192)
T 1l3i_A 106 VGGSGGE---------LQEILRI-IKDKLKPGGRIIVTAI------LLETKFEAMECLRDLGF-DVNIT 157 (192)
T ss_dssp ESCCTTC---------HHHHHHH-HHHTEEEEEEEEEEEC------BHHHHHHHHHHHHHTTC-CCEEE
T ss_pred ECCchHH---------HHHHHHH-HHHhcCCCcEEEEEec------CcchHHHHHHHHHHCCC-ceEEE
Confidence 9865321 2588998 7999999999988642 234456677777766 5 44433
No 62
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.32 E-value=3.5e-12 Score=114.82 Aligned_cols=109 Identities=13% Similarity=0.083 Sum_probs=82.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvI 182 (339)
.+..+||+||||+|.++..+++. +..+|++||+++.+++.|+++.... .++++++.+|+.+.+.. ..++||+|
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhc-CCCeEEEEcCCHHHHHHHHHHHHhc-----CCCeEEEecCHHHhhcccCCCceEEE
Confidence 34678999999999999999774 3458999999999999999987543 36899999999886543 34789999
Q ss_pred EecCCCCCCCCccccCC-cHHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLY-TKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~-t~ef~~~~~~~~L~~gGilv~~ 221 (339)
++|.+... .+..+.. ...+++. +++.|+|||++++.
T Consensus 133 ~~d~~~~~--~~~~~~~~~~~~l~~-~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 133 LYDTYPLS--EETWHTHQFNFIKNH-AFRLLKPGGVLTYC 169 (236)
T ss_dssp EECCCCCB--GGGTTTHHHHHHHHT-HHHHEEEEEEEEEC
T ss_pred EECCcccc--hhhhhhhhHHHHHHH-HHHhcCCCeEEEEE
Confidence 99754321 1111111 1256888 79999999999864
No 63
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.32 E-value=1.5e-11 Score=119.52 Aligned_cols=118 Identities=14% Similarity=0.117 Sum_probs=88.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc---CCcee
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR---NEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~---~~~yD 180 (339)
...++||++|||+|+++..+++. +..+|++||+++.+++.|++++..++. ++.+++++.+|+.+++... .++||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~~--~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANHL--DMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTTC--CCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECCHHHHHHHHHHhCCCcc
Confidence 35679999999999999999874 556999999999999999999887642 1228999999999988642 45899
Q ss_pred EEEecCCCCC-CCCccccCC--cHHHHHHHHccccCCCcEEEEecCCC
Q 019550 181 VIFGDLADPV-EGGPCYQLY--TKSFYERILKPKLNDNGIFVTQAGPA 225 (339)
Q Consensus 181 vIi~D~~d~~-~~~p~~~L~--t~ef~~~~~~~~L~~gGilv~~~~~~ 225 (339)
+|++|++.-. ..+...... -.++++. +.+.|+|||++++.+.++
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~-~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQ-GLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHH-HHHTEEEEEEEEEEECCT
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeCCC
Confidence 9999997521 000000000 1245566 578999999999887655
No 64
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.31 E-value=2.8e-11 Score=108.03 Aligned_cols=149 Identities=16% Similarity=0.235 Sum_probs=99.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHH--HhcCCcee
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAEL--EKRNEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l--~~~~~~yD 180 (339)
.+..+||++|||+|.++..+++.. +..+|++||+++.+++.++++... .++++++.+|+.+.. ....++||
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~------~~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE------RRNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS------CTTEEEEECCTTCGGGGTTTCCCEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc------cCCCEEEEccCCCcchhhcccCCce
Confidence 356789999999999999999763 347999999999999999887653 268999999987632 22346899
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCc-c--CchhhHHHHHHHHHhHCCceEEEEEeecc
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGI-F--THKEVFSSIYNTIKQVFKHVVAYTAHVPS 257 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~-~--~~~~~~~~i~~~l~~~F~~v~~~~~~iP~ 257 (339)
+|++|.+.+. ....+++. +.+.|+|||.+++.....+. . ............+.+.|..+... .++.
T Consensus 146 ~v~~~~~~~~--------~~~~~l~~-~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~f~~~~~~--~~~~ 214 (227)
T 1g8a_A 146 VIFEDVAQPT--------QAKILIDN-AEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEYFEVIERL--NLEP 214 (227)
T ss_dssp EEEECCCSTT--------HHHHHHHH-HHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHTTSEEEEEE--ECTT
T ss_pred EEEECCCCHh--------HHHHHHHH-HHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHHHhhceeeeEe--ccCc
Confidence 9999977332 12355888 79999999988875321100 0 11122333444455456544433 3454
Q ss_pred cCCceeEEEEec
Q 019550 258 FADTWGWVMASD 269 (339)
Q Consensus 258 ~~~~~~~~~as~ 269 (339)
|...+.++++.+
T Consensus 215 ~~~~~~~~~~~~ 226 (227)
T 1g8a_A 215 YEKDHALFVVRK 226 (227)
T ss_dssp TSSSEEEEEEEC
T ss_pred ccCCCEEEEEEe
Confidence 544455666654
No 65
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.31 E-value=2.2e-11 Score=109.35 Aligned_cols=150 Identities=16% Similarity=0.170 Sum_probs=99.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHH--hcCCceeE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELE--KRNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~--~~~~~yDv 181 (339)
.+..+||+||||+|.++..+++..+..+|++||+++.+++.++++... .++++++.+|+.+... ...++||+
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~~~~~D~ 146 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE------RENIIPILGDANKPQEYANIVEKVDV 146 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT------CTTEEEEECCTTCGGGGTTTSCCEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc------CCCeEEEECCCCCcccccccCccEEE
Confidence 356789999999999999999876667999999999999999988543 2689999999875211 11268999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCC---CCccCchhhHHHHHHHHHhH-CCceEEEEEeecc
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGP---AGIFTHKEVFSSIYNTIKQV-FKHVVAYTAHVPS 257 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~---~~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~iP~ 257 (339)
|+.+.+++. ....+++. +.+.|+|||.+++.... +........+.+.++.|++. |..+... .+..
T Consensus 147 v~~~~~~~~--------~~~~~l~~-~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~~l~~~Gf~~~~~~--~~~~ 215 (230)
T 1fbn_A 147 IYEDVAQPN--------QAEILIKN-AKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVDEV--DIEP 215 (230)
T ss_dssp EEECCCSTT--------HHHHHHHH-HHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHHHHHHHTEEEEEEE--ECTT
T ss_pred EEEecCChh--------HHHHHHHH-HHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHHHHHHCCCEEEEEE--ccCC
Confidence 998875442 13567888 78999999998874211 10000112232333356654 4333322 2333
Q ss_pred cCCceeEEEEecC
Q 019550 258 FADTWGWVMASDQ 270 (339)
Q Consensus 258 ~~~~~~~~~as~~ 270 (339)
+...+.+++|.++
T Consensus 216 ~~~~~~~v~~~k~ 228 (230)
T 1fbn_A 216 FEKDHVMFVGIWE 228 (230)
T ss_dssp TSTTEEEEEEEEC
T ss_pred CccceEEEEEEeC
Confidence 4444566777764
No 66
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.31 E-value=1.9e-12 Score=112.88 Aligned_cols=115 Identities=14% Similarity=0.066 Sum_probs=86.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.+..+|||+|||+|..+..+++.. +..+|++||+++.+++.|++++..... .++++++.+|+.++....+++||+|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL---IDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC---GGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCCeEEEECCHHHHhhhccCCceEE
Confidence 456799999999999999999863 456999999999999999999875431 3689999999877654456789999
Q ss_pred EecCCC-CCCCCc--cccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 183 FGDLAD-PVEGGP--CYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 183 i~D~~d-~~~~~p--~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+++++- |..... ...-...++++. +.+.|+|||++++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSK-AMELLVTGGIITVVI 139 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEcCCcccCcccccccCcccHHHHHHH-HHHhCcCCCEEEEEE
Confidence 999753 210000 000012468998 799999999988764
No 67
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.30 E-value=1.2e-11 Score=112.32 Aligned_cols=117 Identities=14% Similarity=0.157 Sum_probs=89.6
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhcccc----CCCCeEEEEccHHHHHHh--cCCc
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAF----CSKKLNLVVNDAKAELEK--RNEK 178 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~----~~~rv~v~~~D~~~~l~~--~~~~ 178 (339)
+..+||+||||+|.++..+++..+..+|++||+++.+++.|++++....... .-++++++.+|+.+++.. ....
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 4568999999999999999987766799999999999999999876431100 125799999999887653 2578
Q ss_pred eeEEEecCCCCCCCC--ccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 179 FDVIFGDLADPVEGG--PCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 179 yDvIi~D~~d~~~~~--p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|.|++..++|+... ....+...++++. +.+.|+|||++++.+
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~-~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSE-YAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHH-HHHHEEEEEEEEEEE
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHH-HHHHcCCCCEEEEEe
Confidence 999998877764110 0123445789999 899999999999864
No 68
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.29 E-value=5.7e-11 Score=105.18 Aligned_cols=109 Identities=22% Similarity=0.249 Sum_probs=82.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccc-cCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEA-FCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~-~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.++++||+||||+|.++..+++..+..++++||+++.+++.|++.+...... ...++++++.+|+. .+....++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~V 106 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV-YRDKRFSGYDAA 106 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS-SCCGGGTTCSEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc-ccccccCCCCEE
Confidence 3578999999999999999998766689999999999999999987643210 01248999999973 233334789999
Q ss_pred EecCCCCCCCCccccCCc---HHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYT---KSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t---~ef~~~~~~~~L~~gGilv~~ 221 (339)
++...-. ++.. ..+++. +++.|+|||+++..
T Consensus 107 ~~~~~l~-------~~~~~~~~~~l~~-~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 107 TVIEVIE-------HLDENRLQAFEKV-LFEFTRPQTVIVST 140 (219)
T ss_dssp EEESCGG-------GCCHHHHHHHHHH-HHTTTCCSEEEEEE
T ss_pred EEHHHHH-------hCCHHHHHHHHHH-HHHhhCCCEEEEEc
Confidence 9865421 2221 478998 79999999987754
No 69
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.28 E-value=1.2e-11 Score=108.66 Aligned_cols=105 Identities=12% Similarity=0.114 Sum_probs=83.2
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
++.+||+||||+|.++..+++. +..+++++|+++.+++.|++.+..... .++++++.+|+.+. ....++||+|++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~-~~~~~~~D~v~~ 117 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANL---NDRIQIVQGDVHNI-PIEDNYADLIVS 117 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECBTTBC-SSCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccc---cCceEEEEcCHHHC-CCCcccccEEEE
Confidence 4459999999999999999986 567999999999999999999875432 46899999998652 223478999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
...-... + ....+++. +++.|+|||.+++.
T Consensus 118 ~~~l~~~--~----~~~~~l~~-~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 118 RGSVFFW--E----DVATAFRE-IYRILKSGGKTYIG 147 (219)
T ss_dssp ESCGGGC--S----CHHHHHHH-HHHHEEEEEEEEEE
T ss_pred CchHhhc--c----CHHHHHHH-HHHhCCCCCEEEEE
Confidence 8652210 0 13578998 79999999998885
No 70
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.28 E-value=1.2e-11 Score=113.04 Aligned_cols=106 Identities=16% Similarity=0.163 Sum_probs=85.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+||+||||+|..+..+++. +..+|++||+++.+++.|++.+..... .++++++.+|+.+. ....++||+|+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~-~~~~~~fD~i~ 119 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGL---QNRVTGIVGSMDDL-PFRNEELDLIW 119 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECCTTSC-CCCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCC---CcCcEEEEcChhhC-CCCCCCEEEEE
Confidence 45789999999999999999986 667999999999999999999865432 47899999998653 22357899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-. .+-...+++. +++.|+|||.+++..
T Consensus 120 ~~~~~~-------~~~~~~~l~~-~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 120 SEGAIY-------NIGFERGLNE-WRKYLKKGGYLAVSE 150 (267)
T ss_dssp ESSCGG-------GTCHHHHHHH-HGGGEEEEEEEEEEE
T ss_pred EcCCce-------ecCHHHHHHH-HHHHcCCCCEEEEEE
Confidence 986522 1224688998 899999999998764
No 71
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.27 E-value=4.3e-11 Score=106.60 Aligned_cols=148 Identities=15% Similarity=0.181 Sum_probs=93.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHH--hcCCceeE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELE--KRNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~--~~~~~yDv 181 (339)
.+..+|||||||+|..+..+++..+..+|++||+++.+++.+.+.... .+++.++.+|+.+... ...++||+
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~------~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE------RNNIIPLLFDASKPWKYSGIVEKVDL 129 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH------CSSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc------CCCeEEEEcCCCCchhhcccccceeE
Confidence 346789999999999999988765557899999999987655543321 2468888999865311 12378999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCC--c-cCchhhHHHHHHHHHhHCCceEEEEEeeccc
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG--I-FTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 258 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~--~-~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~ 258 (339)
|+++...+. ....+++. +++.|+|||.+++.....+ . ....+.+....+.+++.|..+.. .....|
T Consensus 130 V~~~~~~~~--------~~~~~l~~-~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~--~~~~p~ 198 (210)
T 1nt2_A 130 IYQDIAQKN--------QIEILKAN-AEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGDFKIVKH--GSLMPY 198 (210)
T ss_dssp EEECCCSTT--------HHHHHHHH-HHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTTSEEEEE--EECTTT
T ss_pred EEEeccChh--------HHHHHHHH-HHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhhcEEeee--ecCCCC
Confidence 999964331 12345788 7999999999987631110 0 11122232334446766543333 234445
Q ss_pred CCceeEEEEe
Q 019550 259 ADTWGWVMAS 268 (339)
Q Consensus 259 ~~~~~~~~as 268 (339)
+....++++.
T Consensus 199 ~~~h~~~~~~ 208 (210)
T 1nt2_A 199 HRDHIFIHAY 208 (210)
T ss_dssp CTTEEEEEEE
T ss_pred CCCcEEEEEE
Confidence 4434455554
No 72
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.26 E-value=1.8e-11 Score=110.79 Aligned_cols=106 Identities=10% Similarity=0.105 Sum_probs=84.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+||+||||+|..+..+++..+ .+|++||+++.+++.|++.+..... .++++++.+|+.+. ....++||+|+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~-~~~~~~fD~v~ 119 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKANC---ADRVKGITGSMDNL-PFQNEELDLIW 119 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECCTTSC-SSCTTCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcCC---CCceEEEECChhhC-CCCCCCEEEEE
Confidence 4567999999999999999998765 4999999999999999999865432 46799999998543 22347899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.. +-..++++. +++.|+|||++++..
T Consensus 120 ~~~~l~~-------~~~~~~l~~-~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 120 SEGAIYN-------IGFERGMNE-WSKYLKKGGFIAVSE 150 (257)
T ss_dssp EESCSCC-------CCHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred ecChHhh-------cCHHHHHHH-HHHHcCCCcEEEEEE
Confidence 9865322 124588998 899999999998764
No 73
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.26 E-value=4.3e-11 Score=111.59 Aligned_cols=111 Identities=21% Similarity=0.251 Sum_probs=85.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCce---eE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKF---DV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~y---Dv 181 (339)
.+.+|||||||+|.++..+++. +..+|++||+++.+++.|+++....+. ..+++++.+|+.+.+. ++| |+
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l---~~~v~~~~~D~~~~~~---~~f~~~D~ 195 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGV---SDRFFVRKGEFLEPFK---EKFASIEM 195 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTC---TTSEEEEESSTTGGGG---GGTTTCCE
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC---CCceEEEECcchhhcc---cccCCCCE
Confidence 4578999999999999999988 778999999999999999999876532 3579999999987653 468 99
Q ss_pred EEecCCCCCC---------CCccccCC----cHHHHHHHHc-cccCCCcEEEEecC
Q 019550 182 IFGDLADPVE---------GGPCYQLY----TKSFYERILK-PKLNDNGIFVTQAG 223 (339)
Q Consensus 182 Ii~D~~d~~~---------~~p~~~L~----t~ef~~~~~~-~~L~~gGilv~~~~ 223 (339)
|++|++-... ..|...|+ ..++|+. +. +.|+|||.+++..+
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~-i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYRE-FFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHH-HHHHCCCTTCEEEEECC
T ss_pred EEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHH-HHHhcCCCCCEEEEEEC
Confidence 9999763110 01100011 1278999 78 99999999998754
No 74
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.26 E-value=1.8e-11 Score=114.19 Aligned_cols=110 Identities=14% Similarity=0.125 Sum_probs=84.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++..+ .+|++||+++.+++.|++.+..... ..+++++.+|+.++ .++||+|+
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~----~~~fD~v~ 142 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDS---PRRKEVRIQGWEEF----DEPVDRIV 142 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCC---SSCEEEEECCGGGC----CCCCSEEE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCC---CCceEEEECCHHHc----CCCccEEE
Confidence 4567999999999999999998755 7899999999999999999865432 35899999999775 67899999
Q ss_pred ecCCCCCCCCcc---ccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPC---YQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~---~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.....|. ..-....+++. +++.|+|||+++++.
T Consensus 143 ~~~~~~~~~d~~~~~~~~~~~~~l~~-~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 143 SLGAFEHFADGAGDAGFERYDTFFKK-FYNLTPDDGRMLLHT 183 (302)
T ss_dssp EESCGGGTTCCSSCCCTTHHHHHHHH-HHHSSCTTCEEEEEE
T ss_pred EcchHHhcCccccccchhHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 975421100010 00122588999 899999999999875
No 75
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.26 E-value=2.2e-10 Score=97.57 Aligned_cols=120 Identities=20% Similarity=0.157 Sum_probs=93.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||++|||+|.++..+++ +..+++++|+++.+++.+++++.... -++++++.+|+.+.+.. ++||+|+
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~~~--~~~D~i~ 105 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFN----IKNCQIIKGRAEDVLDK--LEFNKAF 105 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTT----CCSEEEEESCHHHHGGG--CCCSEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcC----CCcEEEEECCccccccC--CCCcEEE
Confidence 4567999999999999999988 56899999999999999999987543 26799999999885443 6899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEE
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVA 250 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~ 250 (339)
++.. . . ..++++. +++. |||.+++... .......+.+.+++....+..
T Consensus 106 ~~~~-~---~------~~~~l~~-~~~~--~gG~l~~~~~------~~~~~~~~~~~l~~~g~~~~~ 153 (183)
T 2yxd_A 106 IGGT-K---N------IEKIIEI-LDKK--KINHIVANTI------VLENAAKIINEFESRGYNVDA 153 (183)
T ss_dssp ECSC-S---C------HHHHHHH-HHHT--TCCEEEEEES------CHHHHHHHHHHHHHTTCEEEE
T ss_pred ECCc-c---c------HHHHHHH-HhhC--CCCEEEEEec------ccccHHHHHHHHHHcCCeEEE
Confidence 9877 1 1 3478888 6766 9999988642 234566777888877644444
No 76
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.26 E-value=2e-11 Score=112.69 Aligned_cols=124 Identities=10% Similarity=0.165 Sum_probs=93.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhc-CCCCEEEEEEcCHHHHHHHHHhhhhh-ccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKH-KSLEKVVMCDIDQEVVDFCRRFLTVN-QEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ar~~f~~~-~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
.+..+||++|||+|..+..+++. .+..+|+++|+++.+++.|++++... + .++++++.+|+.+.+ ..++||+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~~--~~~~fD~ 182 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD----IGNVRTSRSDIADFI--SDQMYDA 182 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC----CTTEEEECSCTTTCC--CSCCEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC----CCcEEEEECchhccC--cCCCccE
Confidence 34679999999999999999986 56689999999999999999997653 3 368999999987633 2467999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH-CCceEEE
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV-FKHVVAY 251 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~-F~~v~~~ 251 (339)
|++|.+++. ++++. +.+.|+|||++++... .......+.+.+++. |..+..+
T Consensus 183 Vi~~~~~~~-----------~~l~~-~~~~LkpgG~l~i~~~------~~~~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 183 VIADIPDPW-----------NHVQK-IASMMKPGSVATFYLP------NFDQSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp EEECCSCGG-----------GSHHH-HHHTEEEEEEEEEEES------SHHHHHHHHHHSGGGTEEEEEEE
T ss_pred EEEcCcCHH-----------HHHHH-HHHHcCCCCEEEEEeC------CHHHHHHHHHHHHHCCCeEEEEE
Confidence 999876442 56788 7899999999988752 122345556666654 4444433
No 77
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.26 E-value=4.1e-11 Score=110.88 Aligned_cols=137 Identities=13% Similarity=0.029 Sum_probs=97.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCC-CEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh---cCCce
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSL-EKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK---RNEKF 179 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~---~~~~y 179 (339)
.+..+|||+|||+|+.+..+++..+. .+|+++|+++..++.+++++...+ -++++++.+|+.++... ..++|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG----VLNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC----CCcEEEEeCChHhcchhhhhccccC
Confidence 34578999999999999999875443 799999999999999999987543 25899999999887543 25689
Q ss_pred eEEEecCCCCCCCCccc-----------c--CCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCC
Q 019550 180 DVIFGDLADPVEGGPCY-----------Q--LYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFK 246 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~~-----------~--L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~ 246 (339)
|+|++|++-... +... . -...++++. +.+.|+|||.++..+.+.. ......+.+.+.+.++
T Consensus 158 D~Vl~d~Pcs~~-g~~~~~p~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~lv~stcs~~----~~ene~~v~~~l~~~~ 231 (274)
T 3ajd_A 158 DKILLDAPCSGN-IIKDKNRNVSEEDIKYCSLRQKELIDI-GIDLLKKDGELVYSTCSME----VEENEEVIKYILQKRN 231 (274)
T ss_dssp EEEEEEECCC-------------HHHHTGGGTCHHHHHHH-HHHHEEEEEEEEEEESCCC----TTSSHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCC-cccccCCCCCHHHHHHHHHHHHHHHHH-HHHhCCCCCEEEEEECCCC----hHHhHHHHHHHHHhCC
Confidence 999999763210 1000 0 123678888 7899999999998765431 1222445555555566
Q ss_pred ceEE
Q 019550 247 HVVA 250 (339)
Q Consensus 247 ~v~~ 250 (339)
....
T Consensus 232 ~~~~ 235 (274)
T 3ajd_A 232 DVEL 235 (274)
T ss_dssp SEEE
T ss_pred CcEE
Confidence 6544
No 78
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.25 E-value=9.1e-12 Score=116.02 Aligned_cols=145 Identities=15% Similarity=0.136 Sum_probs=101.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+.++|||+|||.|.++..++++ +..+|+++|+||..++.++++...++. ..+++++.+|++++.. .+.||.|+
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v---~~~v~~~~~D~~~~~~--~~~~D~Vi 197 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKV---EDRMSAYNMDNRDFPG--ENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTC---TTTEEEECSCTTTCCC--CSCEEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEeCcHHHhcc--ccCCCEEE
Confidence 45789999999999999999885 567999999999999999999988754 5789999999998753 46899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEE-eeccc-CCc
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTA-HVPSF-ADT 261 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~-~iP~~-~~~ 261 (339)
++++.. +.+|+.. +.+.|++||++.+....+......+....+.+..++....+..... .+-+| ++.
T Consensus 198 ~~~p~~----------~~~~l~~-a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~~~~~Vk~yaP~~ 266 (278)
T 3k6r_A 198 MGYVVR----------THEFIPK-ALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLNELKIKRYAPGV 266 (278)
T ss_dssp ECCCSS----------GGGGHHH-HHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEEEEEEEEETTTE
T ss_pred ECCCCc----------HHHHHHH-HHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEEEEEEEEEeECcCc
Confidence 997621 3477887 7789999999865432110011122333444444554444443322 23445 344
Q ss_pred eeEE
Q 019550 262 WGWV 265 (339)
Q Consensus 262 ~~~~ 265 (339)
|.++
T Consensus 267 ~hvv 270 (278)
T 3k6r_A 267 WHVV 270 (278)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 4443
No 79
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.25 E-value=3.5e-11 Score=110.16 Aligned_cols=134 Identities=18% Similarity=0.189 Sum_probs=98.1
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++++||++|||+|.++..+++. +. +|+++|+|+.+++.|++++..+.. . ++++.+|+.+.+. .++||+|+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~-g~-~v~gvDi~~~~v~~a~~n~~~~~~----~-v~~~~~d~~~~~~--~~~fD~Vv 189 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKL-GG-KALGVDIDPMVLPQAEANAKRNGV----R-PRFLEGSLEAALP--FGPFDLLV 189 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TC-EEEEEESCGGGHHHHHHHHHHTTC----C-CEEEESCHHHHGG--GCCEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHh-CC-eEEEEECCHHHHHHHHHHHHHcCC----c-EEEEECChhhcCc--CCCCCEEE
Confidence 45689999999999999998884 44 999999999999999999876532 2 8999999987642 46899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH-CCceEEEEEeecccCCce
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV-FKHVVAYTAHVPSFADTW 262 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~iP~~~~~~ 262 (339)
++.... . ..++++. +.+.|+|||.+++... .......+.+.+++. |..+.... .+.|
T Consensus 190 ~n~~~~-------~--~~~~l~~-~~~~LkpgG~lils~~------~~~~~~~v~~~l~~~Gf~~~~~~~------~~~W 247 (254)
T 2nxc_A 190 ANLYAE-------L--HAALAPR-YREALVPGGRALLTGI------LKDRAPLVREAMAGAGFRPLEEAA------EGEW 247 (254)
T ss_dssp EECCHH-------H--HHHHHHH-HHHHEEEEEEEEEEEE------EGGGHHHHHHHHHHTTCEEEEEEE------ETTE
T ss_pred ECCcHH-------H--HHHHHHH-HHHHcCCCCEEEEEee------ccCCHHHHHHHHHHCCCEEEEEec------cCCe
Confidence 986421 1 2478888 7999999999988632 122345666777776 44333321 2457
Q ss_pred eEEEEe
Q 019550 263 GWVMAS 268 (339)
Q Consensus 263 ~~~~as 268 (339)
..+++.
T Consensus 248 ~~l~~~ 253 (254)
T 2nxc_A 248 VLLAYG 253 (254)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 766654
No 80
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.25 E-value=2.2e-11 Score=107.84 Aligned_cols=112 Identities=17% Similarity=0.115 Sum_probs=82.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccc-cCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEA-FCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~-~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.++++||+||||+|.++..+++..+..++++||+++.+++.|++.+...... ...++++++.+|+. .+....++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~v 106 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT-YQDKRFHGYDAA 106 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT-SCCGGGCSCSEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc-cccccCCCcCEE
Confidence 3567999999999999999998766689999999999999999987643210 01248999999973 233334689999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
++...-.. -+. -....+++. +++.|+|||++++.
T Consensus 107 ~~~~~l~~--~~~--~~~~~~l~~-~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 107 TVIEVIEH--LDL--SRLGAFERV-LFEFAQPKIVIVTT 140 (217)
T ss_dssp EEESCGGG--CCH--HHHHHHHHH-HHTTTCCSEEEEEE
T ss_pred eeHHHHHc--CCH--HHHHHHHHH-HHHHcCCCEEEEEc
Confidence 98754211 000 011478998 79999999988764
No 81
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.25 E-value=1.2e-11 Score=119.45 Aligned_cols=105 Identities=15% Similarity=0.231 Sum_probs=82.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVIF 183 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvIi 183 (339)
++++||||| |+|.++.++++..+..+|++||+|+.+++.|++++...+. .+++++.+|+.+.+.. ..++||+|+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~----~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY----EDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC----CCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCEEEEEChhhhhchhhccCCccEEE
Confidence 468999999 9999999998765557999999999999999999876532 3899999999875542 245899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCc-EEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNG-IFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gG-ilv~~~ 222 (339)
+|++-.. . . ...|++. +.+.|+||| ++++..
T Consensus 247 ~~~p~~~----~-~--~~~~l~~-~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 247 TDPPETL----E-A--IRAFVGR-GIATLKGPRCAGYFGI 278 (373)
T ss_dssp ECCCSSH----H-H--HHHHHHH-HHHTBCSTTCEEEEEE
T ss_pred ECCCCch----H-H--HHHHHHH-HHHHcccCCeEEEEEE
Confidence 9986321 1 2 2789999 799999999 434443
No 82
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.25 E-value=6.6e-12 Score=115.62 Aligned_cols=99 Identities=16% Similarity=0.176 Sum_probs=78.6
Q ss_pred CCCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 103 HQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 103 ~~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.+...+|||||||+|.++..++++. .+|++||+++.+++.|++ .++++++.+|+.+. .-..++||+|
T Consensus 37 ~~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~----------~~~v~~~~~~~e~~-~~~~~sfD~v 103 (257)
T 4hg2_A 37 APARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALR----------HPRVTYAVAPAEDT-GLPPASVDVA 103 (257)
T ss_dssp SSCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCC----------CTTEEEEECCTTCC-CCCSSCEEEE
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhh----------cCCceeehhhhhhh-cccCCcccEE
Confidence 3556799999999999999998853 689999999999987754 37899999997542 3335789999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
++...-.+ +-...++++ ++++|||||+|++..
T Consensus 104 ~~~~~~h~-------~~~~~~~~e-~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 104 IAAQAMHW-------FDLDRFWAE-LRRVARPGAVFAAVT 135 (257)
T ss_dssp EECSCCTT-------CCHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEeeehhH-------hhHHHHHHH-HHHHcCCCCEEEEEE
Confidence 99654332 124578999 899999999998764
No 83
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.25 E-value=2.8e-11 Score=108.92 Aligned_cols=123 Identities=15% Similarity=0.173 Sum_probs=92.4
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
+..+||++|||+|.++..+++. ..+++++|+++.+++.|++++..... +++++++.+|..+.+. ..+.||+|++
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~~-~~~~~D~v~~ 164 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNL---GKNVKFFNVDFKDAEV-PEGIFHAAFV 164 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTC---CTTEEEECSCTTTSCC-CTTCBSEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCC---CCcEEEEEcChhhccc-CCCcccEEEE
Confidence 4679999999999999999986 57999999999999999999765421 3689999999876431 2357999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEE
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAY 251 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~ 251 (339)
+++++. ++++. +.+.|+|||.+++... ..+....+.+.+++.|..+..+
T Consensus 165 ~~~~~~-----------~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~l~~~f~~~~~~ 213 (248)
T 2yvl_A 165 DVREPW-----------HYLEK-VHKSLMEGAPVGFLLP------TANQVIKLLESIENYFGNLEVV 213 (248)
T ss_dssp CSSCGG-----------GGHHH-HHHHBCTTCEEEEEES------SHHHHHHHHHHSTTTEEEEEEE
T ss_pred CCcCHH-----------HHHHH-HHHHcCCCCEEEEEeC------CHHHHHHHHHHHHhhCCcceEE
Confidence 876442 55777 7899999999998752 2234455555555445544443
No 84
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.25 E-value=3.1e-11 Score=109.34 Aligned_cols=124 Identities=13% Similarity=0.119 Sum_probs=93.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhc-CCCCEEEEEEcCHHHHHHHHHhhhhh-ccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKH-KSLEKVVMCDIDQEVVDFCRRFLTVN-QEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ar~~f~~~-~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
.+..+||++|||+|.++..+++. .+..+|+++|+++.+++.|++++... + .++++++.+|+.+. .-..++||+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~-~~~~~~~D~ 169 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ----VENVRFHLGKLEEA-ELEEAAYDG 169 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEESCGGGC-CCCTTCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC----CCCEEEEECchhhc-CCCCCCcCE
Confidence 45679999999999999999986 44689999999999999999998654 3 47899999998765 112367999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH-CCceEE
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV-FKHVVA 250 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~-F~~v~~ 250 (339)
|++|.+++. ++++. +.+.|+|||.+++... ..+....+.+.+++. |..+..
T Consensus 170 v~~~~~~~~-----------~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~l~~~gf~~~~~ 221 (258)
T 2pwy_A 170 VALDLMEPW-----------KVLEK-AALALKPDRFLVAYLP------NITQVLELVRAAEAHPFRLERV 221 (258)
T ss_dssp EEEESSCGG-----------GGHHH-HHHHEEEEEEEEEEES------CHHHHHHHHHHHTTTTEEEEEE
T ss_pred EEECCcCHH-----------HHHHH-HHHhCCCCCEEEEEeC------CHHHHHHHHHHHHHCCCceEEE
Confidence 999876442 56788 7899999999988642 223455666666654 444433
No 85
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.24 E-value=1e-11 Score=110.99 Aligned_cols=106 Identities=17% Similarity=0.281 Sum_probs=83.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++..+..+++++|+++.+++.|++.+... ++++++.+|+.+... .++||+|+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~~--~~~fD~v~ 114 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN------LKVKYIEADYSKYDF--EEKYDMVV 114 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC------TTEEEEESCTTTCCC--CSCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC------CCEEEEeCchhccCC--CCCceEEE
Confidence 4568999999999999999998777789999999999999999987543 489999999865421 27899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.. -+ .....++++. +++.|+|||.+++..
T Consensus 115 ~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 115 SALSIHH--LE--DEDKKELYKR-SYSILKESGIFINAD 148 (234)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeCcccc--CC--HHHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 9864221 00 0011258998 899999999998754
No 86
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=9.6e-11 Score=114.23 Aligned_cols=134 Identities=13% Similarity=0.062 Sum_probs=93.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
+.++||++|||+|..+..+++. +. +|++||+|+.+++.|++++..++. ..++..+|+.+++....++||+|++
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~-ga-~V~avDis~~al~~a~~n~~~ng~-----~~~~~~~D~~~~l~~~~~~fD~Ii~ 286 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK-GA-YALAVDKDLEALGVLDQAALRLGL-----RVDIRHGEALPTLRGLEGPFHHVLL 286 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHHTC-----CCEEEESCHHHHHHTCCCCEEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHhCC-----CCcEEEccHHHHHHHhcCCCCEEEE
Confidence 3689999999999999999984 44 499999999999999999887642 1356799999998765555999999
Q ss_pred cCCCCCCCCccccCC-----cHHHHHHHHccccCCCcEEEEecCCCCccCchhhH-HHHHHHHHhHCCceEE
Q 019550 185 DLADPVEGGPCYQLY-----TKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVF-SSIYNTIKQVFKHVVA 250 (339)
Q Consensus 185 D~~d~~~~~p~~~L~-----t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~-~~i~~~l~~~F~~v~~ 250 (339)
|++.-.. +. ..+. ..++++. +.+.|+|||++++.+.++. ...+.+ ..+.+.+.+.-..+..
T Consensus 287 dpP~f~~-~~-~~~~~~~~~~~~ll~~-a~~~LkpGG~Lv~~s~s~~--~~~~~f~~~v~~a~~~~g~~~~i 353 (393)
T 4dmg_A 287 DPPTLVK-RP-EELPAMKRHLVDLVRE-ALRLLAEEGFLWLSSCSYH--LRLEDLLEVARRAAADLGRRLRV 353 (393)
T ss_dssp CCCCCCS-SG-GGHHHHHHHHHHHHHH-HHHTEEEEEEEEEEECCTT--SCHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCcCCC-CH-HHHHHHHHHHHHHHHH-HHHhcCCCCEEEEEECCCC--CCHHHHHHHHHHHHHHhCCeEEE
Confidence 9874110 11 1111 1367777 6899999999986655442 223333 3444455555444443
No 87
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.24 E-value=3.3e-11 Score=108.25 Aligned_cols=104 Identities=18% Similarity=0.195 Sum_probs=80.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH--HHhcCCcee
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE--LEKRNEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~--l~~~~~~yD 180 (339)
....+||+||||+|.++..+++.. +..+|++||+++.+++.+.+..... ++++++.+|+.+. +....++||
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~------~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR------TNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC------TTEEEECSCTTCGGGGGGGCCCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc------CCeEEEEcccCChhhhcccCCcEE
Confidence 346799999999999999999864 4579999999999877766654432 6799999998764 233357899
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|++|.+.+. ....+++. +.+.|+|||++++.+
T Consensus 150 ~V~~~~~~~~--------~~~~~~~~-~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 150 VIFADVAQPD--------QTRIVALN-AHTFLRNGGHFVISI 182 (233)
T ss_dssp EEEECCCCTT--------HHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEEEcCCCcc--------HHHHHHHH-HHHHcCCCeEEEEEE
Confidence 9999887332 12356777 789999999998854
No 88
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.24 E-value=5.6e-11 Score=123.96 Aligned_cols=116 Identities=21% Similarity=0.230 Sum_probs=90.1
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
+.++||++|||+|+++..+++ .+..+|++||+|+.+++.|++++..++. ++++++++.+|+.+++....++||+|++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~-~ga~~V~aVD~s~~al~~a~~N~~~ngl--~~~~v~~i~~D~~~~l~~~~~~fD~Ii~ 615 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGL-GGARSTTTVDMSRTYLEWAERNLRLNGL--TGRAHRLIQADCLAWLREANEQFDLIFI 615 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTC--CSTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHHHHcCC--CccceEEEecCHHHHHHhcCCCccEEEE
Confidence 568999999999999999887 4667899999999999999999987642 2368999999999999887789999999
Q ss_pred cCCCCCCCCccccCC-----cHHHHHHHHccccCCCcEEEEecCC
Q 019550 185 DLADPVEGGPCYQLY-----TKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 185 D~~d~~~~~p~~~L~-----t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
|++.-.........+ -.++++. +.+.|+|||+|++.+.+
T Consensus 616 DPP~f~~~~~~~~~~~~~~~~~~ll~~-a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 616 DPPTFSNSKRMEDAFDVQRDHLALMKD-LKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCCSBC-------CCBHHHHHHHHHHH-HHHHEEEEEEEEEEECC
T ss_pred CCccccCCccchhHHHHHHHHHHHHHH-HHHhcCCCcEEEEEECC
Confidence 997311000000111 1356777 68899999999987654
No 89
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.24 E-value=7.7e-11 Score=114.70 Aligned_cols=141 Identities=26% Similarity=0.201 Sum_probs=98.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc---CCcee
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR---NEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~---~~~yD 180 (339)
...++||++|||+|+++..+++. +..+|++||+++.+++.|++++..++. .+++++++.+|+.+++... .++||
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~-g~~~V~~vD~s~~al~~a~~n~~~ngl--~~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMG-GCSQVVSVDTSQEALDIARQNVELNKL--DLSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC--CGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECCHHHHHHHHHhcCCCCC
Confidence 35679999999999999999984 467999999999999999999876531 0128999999999987642 46899
Q ss_pred EEEecCCCCCCC-Ccccc--CCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHH-HHHHHHHhHCCceEE
Q 019550 181 VIFGDLADPVEG-GPCYQ--LYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFS-SIYNTIKQVFKHVVA 250 (339)
Q Consensus 181 vIi~D~~d~~~~-~p~~~--L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~-~i~~~l~~~F~~v~~ 250 (339)
+|++|++.-... ..... -.-.+++.. +.+.|+|||++++.+.+.. ...+.+. .+.+.+.+....+..
T Consensus 296 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~~~--~~~~~~~~~i~~~~~~~g~~~~~ 366 (396)
T 3c0k_A 296 VIVMDPPKFVENKSQLMGACRGYKDINML-AIQLLNEGGILLTFSCSGL--MTSDLFQKIIADAAIDAGRDVQF 366 (396)
T ss_dssp EEEECCSSTTTCSSSSSCCCTHHHHHHHH-HHHTEEEEEEEEEEECCTT--CCHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeCCCc--CCHHHHHHHHHHHHHHcCCeEEE
Confidence 999998742100 00000 012467777 6889999999988765542 2233333 334466665544443
No 90
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.23 E-value=2.1e-11 Score=112.60 Aligned_cols=118 Identities=17% Similarity=0.270 Sum_probs=91.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhc-CCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKH-KSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.+..+||++|||+|.++..+++. .+..+|+++|+++.+++.|++++..... .++++++.+|+.+.+ ..++||+|
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~--~~~~~D~V 185 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL---IERVTIKVRDISEGF--DEKDVDAL 185 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC---GGGEEEECCCGGGCC--SCCSEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC---CCCEEEEECCHHHcc--cCCccCEE
Confidence 34679999999999999999986 4568999999999999999999865421 257999999987763 23679999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV 244 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~ 244 (339)
++|++++. ++++. +.+.|+|||++++... .......+.+.+++.
T Consensus 186 ~~~~~~~~-----------~~l~~-~~~~L~pgG~l~~~~~------~~~~~~~~~~~l~~~ 229 (277)
T 1o54_A 186 FLDVPDPW-----------NYIDK-CWEALKGGGRFATVCP------TTNQVQETLKKLQEL 229 (277)
T ss_dssp EECCSCGG-----------GTHHH-HHHHEEEEEEEEEEES------SHHHHHHHHHHHHHS
T ss_pred EECCcCHH-----------HHHHH-HHHHcCCCCEEEEEeC------CHHHHHHHHHHHHHC
Confidence 99876542 56777 7889999999998752 123345666666653
No 91
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.23 E-value=3.2e-11 Score=111.09 Aligned_cols=149 Identities=11% Similarity=0.093 Sum_probs=105.2
Q ss_pred CCCeEEEEecchhHHHHHHHhc-------CCC-----CEEEEEEcCH---HH-----------HHHHHHhhhh-h-----
Q 019550 105 NPKTVFIMGGGEGSAAREALKH-------KSL-----EKVVMCDIDQ---EV-----------VDFCRRFLTV-N----- 152 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~-------~~~-----~~v~~VEid~---~v-----------i~~ar~~f~~-~----- 152 (339)
++.+||+||+|+|..+..+++. .|. .+++.+|.+| +. .+.+++.+.. +
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4578999999999988776653 332 4899999987 33 3355555432 0
Q ss_pred --ccccCC--CCeEEEEccHHHHHHhcCC----ceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCC
Q 019550 153 --QEAFCS--KKLNLVVNDAKAELEKRNE----KFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 153 --~~~~~~--~rv~v~~~D~~~~l~~~~~----~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
...+++ .+++++.+|+++.+..... .||+|+.|++.|.. . ..|++.++|+. +.++|+|||+|++.+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~-~--p~lw~~~~l~~-l~~~L~pGG~l~tysa- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAK-N--PDMWTQNLFNA-MARLARPGGTLATFTS- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTT-C--GGGCCHHHHHH-HHHHEEEEEEEEESCC-
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCccc-C--hhhcCHHHHHH-HHHHcCCCcEEEEEeC-
Confidence 011333 4578999999999877543 79999999987642 2 37899999999 8999999999997532
Q ss_pred CCccCchhhHHHHHHHHHhHCCceEEEEEeecccCCceeEEEEecCC
Q 019550 225 AGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQP 271 (339)
Q Consensus 225 ~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~~~~~~~~as~~p 271 (339)
. ..+.+.|+++...|. .+|.+++...++.|.+.+
T Consensus 215 ------a---~~vrr~L~~aGF~v~----~~~g~~~kr~m~~a~~~~ 248 (257)
T 2qy6_A 215 ------A---GFVRRGLQEAGFTMQ----KRKGFGRKREMLCGVMEQ 248 (257)
T ss_dssp ------B---HHHHHHHHHHTEEEE----EECCSTTCCCEEEEEEC-
T ss_pred ------C---HHHHHHHHHCCCEEE----eCCCCCCCCceEEEEecC
Confidence 1 245677777743343 257777777788887754
No 92
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.23 E-value=5.4e-11 Score=115.32 Aligned_cols=135 Identities=16% Similarity=0.157 Sum_probs=97.5
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc---CCceeE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR---NEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~---~~~yDv 181 (339)
..++||++|||+|.++..+++. ..+|++||+++.+++.|++++..++. ++++++.+|+.+++... .++||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~----~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGL----GNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTC----TTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCC----CCceEEECCHHHHHHHHHhcCCCeeE
Confidence 5678999999999999999986 57899999999999999999887642 34999999999987643 578999
Q ss_pred EEecCCCCCCCCccccC-----CcHHHHHHHHccccCCCcEEEEecCCCCccCchhhH-HHHHHHHHhHCCceEE
Q 019550 182 IFGDLADPVEGGPCYQL-----YTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVF-SSIYNTIKQVFKHVVA 250 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L-----~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~-~~i~~~l~~~F~~v~~ 250 (339)
|++|++.-.. .. ..+ .-.++++. +.+.|+|||++++.+.+.. ...+.+ ..+.+.+.+....+..
T Consensus 283 Ii~dpP~~~~-~~-~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~~~--~~~~~~~~~i~~~~~~~g~~~~~ 352 (382)
T 1wxx_A 283 VVLDPPAFAK-GK-KDVERAYRAYKEVNLR-AIKLLKEGGILATASCSHH--MTEPLFYAMVAEAAQDAHRLLRV 352 (382)
T ss_dssp EEECCCCSCC-ST-TSHHHHHHHHHHHHHH-HHHTEEEEEEEEEEECCTT--SCHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEECCCCCCC-Ch-hHHHHHHHHHHHHHHH-HHHhcCCCCEEEEEECCCC--CCHHHHHHHHHHHHHHcCCeEEE
Confidence 9999874210 11 011 11467777 7899999999998765542 233333 3334455555544443
No 93
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.23 E-value=1.5e-11 Score=113.83 Aligned_cols=124 Identities=14% Similarity=0.074 Sum_probs=95.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+.++|||+|||+|.++..+++..+..+|++||+++.+++.|++++..++ -++++++.+|+.++ .. .++||+|+
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~----l~~~~~~~~d~~~~-~~-~~~~D~Vi 191 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK----LNNVIPILADNRDV-EL-KDVADRVI 191 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT----CSSEEEEESCGGGC-CC-TTCEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCEEEEECChHHc-Cc-cCCceEEE
Confidence 45679999999999999999987666799999999999999999987764 25789999999887 43 56899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHC
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVF 245 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F 245 (339)
+|++.. ..++++. +.+.|+|||++++.+.+.. ....+.+.+..+.+.+.+
T Consensus 192 ~d~p~~----------~~~~l~~-~~~~LkpgG~l~~s~~~~~-~~~~~~~~~~~~~~~~~~ 241 (272)
T 3a27_A 192 MGYVHK----------THKFLDK-TFEFLKDRGVIHYHETVAE-KIMYERPIERLKFYAEKN 241 (272)
T ss_dssp ECCCSS----------GGGGHHH-HHHHEEEEEEEEEEEEEEG-GGTTTHHHHHHHHHHHHT
T ss_pred ECCccc----------HHHHHHH-HHHHcCCCCEEEEEEcCcc-ccccccHHHHHHHHHHHh
Confidence 998731 2356777 6889999999987653210 011234556667777654
No 94
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.23 E-value=4.7e-11 Score=116.21 Aligned_cols=114 Identities=21% Similarity=0.195 Sum_probs=88.5
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh---cCCceeE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK---RNEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~---~~~~yDv 181 (339)
..++||++|||+|.++..+++. +..+|++||+++.+++.|++++..++. +++++++.+|+.+++.. ..++||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~---~~~v~~~~~d~~~~~~~~~~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGV---EDRMKFIVGSAFEEMEKLQKKGEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC---GGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC---CccceEEECCHHHHHHHHHhhCCCCCE
Confidence 5689999999999999999985 567999999999999999999876642 23899999999988754 2568999
Q ss_pred EEecCCCCCCCCccccC-----CcHHHHHHHHccccCCCcEEEEecCCC
Q 019550 182 IFGDLADPVEGGPCYQL-----YTKSFYERILKPKLNDNGIFVTQAGPA 225 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L-----~t~ef~~~~~~~~L~~gGilv~~~~~~ 225 (339)
|++|++.-.. .. ..+ ...+++.. +.+.|+|||++++.+.++
T Consensus 293 Vi~dpP~~~~-~~-~~~~~~~~~~~~~l~~-~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 293 VVLDPPAFVQ-HE-KDLKAGLRAYFNVNFA-GLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EEECCCCSCS-SG-GGHHHHHHHHHHHHHH-HHTTEEEEEEEEEEECCT
T ss_pred EEECCCCCCC-CH-HHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEECCC
Confidence 9999874210 11 111 12467777 789999999888776544
No 95
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.22 E-value=2.7e-11 Score=111.84 Aligned_cols=107 Identities=18% Similarity=0.252 Sum_probs=85.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+||+||||+|.++..+++. ..+|++||+++.+++.|++.+..... .++++++.+|+.+......++||+|+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGV---SDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CC---GGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC---CcceEEEEcCHHHhhhhcCCCceEEE
Confidence 44679999999999999999985 46899999999999999998765421 36899999999876534568899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.. .+ -...+++. +++.|+|||++++..
T Consensus 142 ~~~~l~~--~~----~~~~~l~~-~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 142 FHAVLEW--VA----DPRSVLQT-LWSVLRPGGVLSLMF 173 (285)
T ss_dssp EESCGGG--CS----CHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred ECchhhc--cc----CHHHHHHH-HHHHcCCCeEEEEEE
Confidence 9764221 01 12578998 899999999998864
No 96
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.21 E-value=1.2e-10 Score=102.63 Aligned_cols=130 Identities=12% Similarity=0.102 Sum_probs=94.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++.. .+|++||+++.+++.|++.+.. .++++++.+|+.+.. ..++||+|+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~--~~~~fD~v~ 119 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKR------WSHISWAATDILQFS--TAELFDLIV 119 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTT------CSSEEEEECCTTTCC--CSCCEEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhccc------CCCeEEEEcchhhCC--CCCCccEEE
Confidence 346789999999999999998853 6899999999999999998754 258999999987654 457899999
Q ss_pred ecCCCCCCCCccccCCc----HHHHHHHHccccCCCcEEEEecCCCC---ccCchhhHHHHHHHHHhHCCceEEE
Q 019550 184 GDLADPVEGGPCYQLYT----KSFYERILKPKLNDNGIFVTQAGPAG---IFTHKEVFSSIYNTIKQVFKHVVAY 251 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t----~ef~~~~~~~~L~~gGilv~~~~~~~---~~~~~~~~~~i~~~l~~~F~~v~~~ 251 (339)
+...-. ++.. ..+++. +++.|+|||++++...... .|........+.+.+.+.+..+...
T Consensus 120 ~~~~l~-------~~~~~~~~~~~l~~-~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 186 (216)
T 3ofk_A 120 VAEVLY-------YLEDMTQMRTAIDN-MVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEALTEVERV 186 (216)
T ss_dssp EESCGG-------GSSSHHHHHHHHHH-HHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHHSEEEEEE
T ss_pred EccHHH-------hCCCHHHHHHHHHH-HHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhhccceEEE
Confidence 975421 1222 367888 7999999999988531110 0112223345666677777765543
No 97
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.20 E-value=1.4e-10 Score=115.28 Aligned_cols=136 Identities=11% Similarity=0.047 Sum_probs=99.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.+..+|||+|||.|+.+..+++..+ ..+|+++|+++..++.+++++...+ -. ++++.+|+.++.....++||+|
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G----~~-v~~~~~Da~~l~~~~~~~FD~I 174 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG----AP-LAVTQAPPRALAEAFGTYFHRV 174 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC----CC-CEEECSCHHHHHHHHCSCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----Ce-EEEEECCHHHhhhhccccCCEE
Confidence 3567999999999999999997644 3689999999999999999987653 24 9999999998765456789999
Q ss_pred EecCCCCCC----CCccccC-------------CcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHC
Q 019550 183 FGDLADPVE----GGPCYQL-------------YTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVF 245 (339)
Q Consensus 183 i~D~~d~~~----~~p~~~L-------------~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F 245 (339)
++|++-... ..| ... ...++++. +.+.|+|||+|+..+.+. ..+....+.+.+.+.+
T Consensus 175 l~D~PcSg~G~~rr~p-d~~~~~~~~~~~~l~~~Q~~iL~~-a~~~LkpGG~LvysTCs~----~~eEne~vv~~~l~~~ 248 (464)
T 3m6w_A 175 LLDAPCSGEGMFRKDR-EAARHWGPSAPKRMAEVQKALLAQ-ASRLLGPGGVLVYSTCTF----APEENEGVVAHFLKAH 248 (464)
T ss_dssp EEECCCCCGGGTTTCT-TSGGGCCTTHHHHHHHHHHHHHHH-HHTTEEEEEEEEEEESCC----CGGGTHHHHHHHHHHC
T ss_pred EECCCcCCccccccCh-HHhhhcCHHHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeccC----chhcCHHHHHHHHHHC
Confidence 999973210 001 010 11678888 789999999999876543 2334455666666666
Q ss_pred CceEE
Q 019550 246 KHVVA 250 (339)
Q Consensus 246 ~~v~~ 250 (339)
+....
T Consensus 249 ~~~~l 253 (464)
T 3m6w_A 249 PEFRL 253 (464)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 65443
No 98
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.20 E-value=3.6e-11 Score=106.50 Aligned_cols=106 Identities=17% Similarity=0.219 Sum_probs=81.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+.+.+||+||||+|.++..+++..+ +++++|+++.+++.|++++... .++++++.+|+.+. ....++||+|+
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~-~~~~~~~D~v~ 108 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR-----ESNVEFIVGDARKL-SFEDKTFDYVI 108 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCTTSC-CSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc-----CCCceEEECchhcC-CCCCCcEEEEE
Confidence 3478999999999999999888643 8999999999999999987654 37899999998652 22246899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-... .. --..++++. +++.|+|||.+++..
T Consensus 109 ~~~~~~~~-~~---~~~~~~l~~-~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 109 FIDSIVHF-EP---LELNQVFKE-VRRVLKPSGKFIMYF 142 (227)
T ss_dssp EESCGGGC-CH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcCchHhC-CH---HHHHHHHHH-HHHHcCCCcEEEEEe
Confidence 98651110 00 012478898 799999999998864
No 99
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.20 E-value=3.8e-11 Score=116.35 Aligned_cols=133 Identities=15% Similarity=0.204 Sum_probs=96.1
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
.+.+|||+|||+|.++..+++..|..+|++||+|+.+++.|++++..+... +..+++++.+|+.+.+ ..++||+|++
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~-~~~~v~~~~~D~~~~~--~~~~fD~Ii~ 298 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE-ALDRCEFMINNALSGV--EPFRFNAVLC 298 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGG-GGGGEEEEECSTTTTC--CTTCEEEEEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCC-cCceEEEEechhhccC--CCCCeeEEEE
Confidence 347999999999999999999877889999999999999999998765320 1246889999987743 2468999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEE
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAY 251 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~ 251 (339)
|++-...... ..-...++++. +.+.|+|||++++-.... .. ....+++.|..+...
T Consensus 299 nppfh~~~~~-~~~~~~~~l~~-~~~~LkpgG~l~iv~n~~-----~~----~~~~l~~~fg~~~~~ 354 (375)
T 4dcm_A 299 NPPFHQQHAL-TDNVAWEMFHH-ARRCLKINGELYIVANRH-----LD----YFHKLKKIFGNCTTI 354 (375)
T ss_dssp CCCC--------CCHHHHHHHH-HHHHEEEEEEEEEEEETT-----SC----HHHHHHHHHSCCEEE
T ss_pred CCCcccCccc-CHHHHHHHHHH-HHHhCCCCcEEEEEEECC-----cC----HHHHHHHhcCCEEEE
Confidence 9874321001 11123478998 799999999988743211 11 235677788887654
No 100
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.20 E-value=1e-11 Score=112.62 Aligned_cols=99 Identities=17% Similarity=0.129 Sum_probs=79.0
Q ss_pred CCCeEEEEecchhHHHHHHHhc----CCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH--HHhcC-C
Q 019550 105 NPKTVFIMGGGEGSAAREALKH----KSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE--LEKRN-E 177 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~----~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~--l~~~~-~ 177 (339)
++++||+||||+|..+..+++. .+..+|++||+++++++.|+. . .++++++.+|+.+. +.... .
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~---~------~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS---D------MENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG---G------CTTEEEEECCSSCSGGGGGGSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc---c------CCceEEEECcchhHHHHHhhccC
Confidence 4679999999999999999886 466899999999999998872 1 37899999999875 43333 3
Q ss_pred ceeEEEecCCCCCCCCccccCCcHHHHHHHHcc-ccCCCcEEEEec
Q 019550 178 KFDVIFGDLADPVEGGPCYQLYTKSFYERILKP-KLNDNGIFVTQA 222 (339)
Q Consensus 178 ~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~-~L~~gGilv~~~ 222 (339)
+||+|++|.... ....+++. +.+ .|+|||++++..
T Consensus 152 ~fD~I~~d~~~~---------~~~~~l~~-~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 152 AHPLIFIDNAHA---------NTFNIMKW-AVDHLLEEGDYFIIED 187 (236)
T ss_dssp CSSEEEEESSCS---------SHHHHHHH-HHHHTCCTTCEEEECS
T ss_pred CCCEEEECCchH---------hHHHHHHH-HHHhhCCCCCEEEEEe
Confidence 799999987621 13478888 786 999999999863
No 101
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.20 E-value=2.9e-11 Score=109.37 Aligned_cols=105 Identities=19% Similarity=0.126 Sum_probs=82.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++.. ..+|+++|+++.+++.|++.+..... .++++++.+|+.+... .++||+|+
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~---~~~v~~~~~d~~~~~~--~~~fD~V~ 108 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGV---SERVHFIHNDAAGYVA--NEKCDVAA 108 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCCTTCCC--SSCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCC---CcceEEEECChHhCCc--CCCCCEEE
Confidence 456799999999999999999865 46899999999999999998765422 3689999999876422 57899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-.. .+ -...+++. +++.|+|||.+++.
T Consensus 109 ~~~~~~~--~~----~~~~~l~~-~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 109 CVGATWI--AG----GFAGAEEL-LAQSLKPGGIMLIG 139 (256)
T ss_dssp EESCGGG--TS----SSHHHHHH-HTTSEEEEEEEEEE
T ss_pred ECCChHh--cC----CHHHHHHH-HHHHcCCCeEEEEe
Confidence 8543111 00 13588999 89999999998875
No 102
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.19 E-value=1.5e-10 Score=104.58 Aligned_cols=120 Identities=10% Similarity=0.093 Sum_probs=92.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
++..+|||||||+|.++..+++..+..+|+++|+|+..++.|+++...++. ..+++++.+|+.+.+.. .++||+|+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl---~~~i~~~~~d~l~~l~~-~~~~D~Iv 89 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL---KEKIQVRLANGLAAFEE-TDQVSVIT 89 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC---TTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEECchhhhccc-CcCCCEEE
Confidence 445789999999999999999876678999999999999999999876643 46899999999765532 13699988
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV 244 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~ 244 (339)
+... + .. .-.++++. +.+.|+++|.+++|.. . ....+.+.|.+.
T Consensus 90 iaG~-----G--g~-~i~~Il~~-~~~~L~~~~~lVlq~~-----~---~~~~vr~~L~~~ 133 (225)
T 3kr9_A 90 IAGM-----G--GR-LIARILEE-GLGKLANVERLILQPN-----N---REDDLRIWLQDH 133 (225)
T ss_dssp EEEE-----C--HH-HHHHHHHH-TGGGCTTCCEEEEEES-----S---CHHHHHHHHHHT
T ss_pred EcCC-----C--hH-HHHHHHHH-HHHHhCCCCEEEEECC-----C---CHHHHHHHHHHC
Confidence 7422 1 11 13588888 7899999999999842 1 234566666665
No 103
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.19 E-value=2.8e-11 Score=112.85 Aligned_cols=117 Identities=15% Similarity=0.162 Sum_probs=82.6
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccc-----------------------------
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEA----------------------------- 155 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~----------------------------- 155 (339)
.+++|||||||+|.++..+++..+..+|++||+|+.+++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 478999999999999999999877789999999999999999986532100
Q ss_pred ------------------------c-CCCCeEEEEccHHHH----HHhcCCceeEEEecCCCCCCCCccccCCcHHHHHH
Q 019550 156 ------------------------F-CSKKLNLVVNDAKAE----LEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYER 206 (339)
Q Consensus 156 ------------------------~-~~~rv~v~~~D~~~~----l~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~ 206 (339)
. -..+++++.+|.... +....++||+|++...-.+..-....-....+++.
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0 014899999998632 22245789999997642110000000023578998
Q ss_pred HHccccCCCcEEEEec
Q 019550 207 ILKPKLNDNGIFVTQA 222 (339)
Q Consensus 207 ~~~~~L~~gGilv~~~ 222 (339)
++++|+|||+|++..
T Consensus 206 -~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 -IYRHLRPGGILVLEP 220 (292)
T ss_dssp -HHHHEEEEEEEEEEC
T ss_pred -HHHHhCCCcEEEEec
Confidence 799999999999863
No 104
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.19 E-value=2.6e-10 Score=103.49 Aligned_cols=149 Identities=15% Similarity=0.173 Sum_probs=94.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhc-CCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHH--hcCCcee
Q 019550 104 QNPKTVFIMGGGEGSAAREALKH-KSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELE--KRNEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~--~~~~~yD 180 (339)
.+..+|||||||+|+.+..+++. .+..+|++||+++.+++...+.... .++++++.+|++.... ...++||
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~------r~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR------RPNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH------CTTEEEEECCTTCGGGTTTTCCCEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh------cCCeEEEEcccccchhhhccccceE
Confidence 34678999999999999988875 3457999999999886543332211 2579999999875321 1246899
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCC---ccCchhhHHHHHHHHHhH-CCceEEEEEeec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAG---IFTHKEVFSSIYNTIKQV-FKHVVAYTAHVP 256 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~---~~~~~~~~~~i~~~l~~~-F~~v~~~~~~iP 256 (339)
+|++|.+.+. . ..-+.+. +++.|+|||.|++..-+.| .....+.+....+.|++. |..+. .....
T Consensus 149 ~I~~d~a~~~---~-----~~il~~~-~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~--~~~l~ 217 (232)
T 3id6_C 149 VLYVDIAQPD---Q-----TDIAIYN-AKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQ--IINLD 217 (232)
T ss_dssp EEEECCCCTT---H-----HHHHHHH-HHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEE--EEECT
T ss_pred EEEecCCChh---H-----HHHHHHH-HHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEE--EeccC
Confidence 9999987542 1 1223444 5669999999987643332 112233455677777764 33222 23344
Q ss_pred ccCCceeEEEEec
Q 019550 257 SFADTWGWVMASD 269 (339)
Q Consensus 257 ~~~~~~~~~~as~ 269 (339)
.|.....+++|.+
T Consensus 218 p~~~~h~~v~~~~ 230 (232)
T 3id6_C 218 PYDKDHAIVLSKY 230 (232)
T ss_dssp TTCSSCEEEEEEE
T ss_pred CCcCceEEEEEEe
Confidence 4655566677765
No 105
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.18 E-value=5.5e-11 Score=112.93 Aligned_cols=123 Identities=15% Similarity=0.250 Sum_probs=89.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhc-CCCCEEEEEEcCHHHHHHHHHhhhhhc-----ccc--CCCCeEEEEccHHHHHHh-
Q 019550 104 QNPKTVFIMGGGEGSAAREALKH-KSLEKVVMCDIDQEVVDFCRRFLTVNQ-----EAF--CSKKLNLVVNDAKAELEK- 174 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ar~~f~~~~-----~~~--~~~rv~v~~~D~~~~l~~- 174 (339)
.+..+||++|||+|.++..+++. .+..+|+++|+++.+++.|++++.... ..+ ..++++++.+|+.+.+..
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 45679999999999999999886 344799999999999999999986321 000 136899999998775322
Q ss_pred cCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH
Q 019550 175 RNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV 244 (339)
Q Consensus 175 ~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~ 244 (339)
..++||+|++|.+++. .+++. +.+.|+|||.+++... .........+.+++.
T Consensus 184 ~~~~fD~V~~~~~~~~-----------~~l~~-~~~~LkpgG~lv~~~~------~~~~~~~~~~~l~~~ 235 (336)
T 2b25_A 184 KSLTFDAVALDMLNPH-----------VTLPV-FYPHLKHGGVCAVYVV------NITQVIELLDGIRTC 235 (336)
T ss_dssp ----EEEEEECSSSTT-----------TTHHH-HGGGEEEEEEEEEEES------SHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEECCCCHH-----------HHHHH-HHHhcCCCcEEEEEeC------CHHHHHHHHHHHHhc
Confidence 2357999999987553 25777 7999999999997642 234455666666653
No 106
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.18 E-value=6.8e-11 Score=104.01 Aligned_cols=100 Identities=21% Similarity=0.240 Sum_probs=80.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++. ..+|+++|+++.+++.|++++.... -++++++.+|+.+.... .++||+|+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~-~~~~D~i~ 148 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLD----LHNVSTRHGDGWQGWQA-RAPFDAII 148 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCGG-GCCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC----CCceEEEECCcccCCcc-CCCccEEE
Confidence 45789999999999999999986 5799999999999999999987543 35799999999875433 47899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
++..-+. .+ +. +.+.|+|||++++..+
T Consensus 149 ~~~~~~~--~~----------~~-~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 149 VTAAPPE--IP----------TA-LMTQLDEGGILVLPVG 175 (210)
T ss_dssp ESSBCSS--CC----------TH-HHHTEEEEEEEEEEEC
T ss_pred Eccchhh--hh----------HH-HHHhcccCcEEEEEEc
Confidence 9875332 11 14 5789999999998764
No 107
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.18 E-value=3.6e-10 Score=99.61 Aligned_cols=100 Identities=21% Similarity=0.206 Sum_probs=78.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh---cCCcee
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK---RNEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~---~~~~yD 180 (339)
..+.+||+||||+|.++..+++. ..++++||+++.+++.|++. ++++++..|..+.... ...+||
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA----------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT----------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh----------cccccchhhHHhhcccccccCCCcc
Confidence 35689999999999999999885 46899999999999999986 4567888998776322 235699
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
+|++...-.. . -...+++. +++.|+|||.+++...
T Consensus 119 ~v~~~~~l~~-~------~~~~~l~~-~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 119 LICANFALLH-Q------DIIELLSA-MRTLLVPGGALVIQTL 153 (227)
T ss_dssp EEEEESCCCS-S------CCHHHHHH-HHHTEEEEEEEEEEEC
T ss_pred EEEECchhhh-h------hHHHHHHH-HHHHhCCCeEEEEEec
Confidence 9999765221 1 13588998 8999999999998653
No 108
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.18 E-value=8.9e-11 Score=107.93 Aligned_cols=126 Identities=16% Similarity=0.209 Sum_probs=94.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhc-CCCCEEEEEEcCHHHHHHHHHhhhhh-ccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKH-KSLEKVVMCDIDQEVVDFCRRFLTVN-QEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ar~~f~~~-~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
.+..+||++|||+|.++..+++. .+..+|+++|+++.+++.|++++... .. -.++++++.+|+.+.. ...++||+
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~--~~~~v~~~~~d~~~~~-~~~~~~D~ 174 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ--PPDNWRLVVSDLADSE-LPDGSVDR 174 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS--CCTTEEEECSCGGGCC-CCTTCEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC--CCCcEEEEECchHhcC-CCCCceeE
Confidence 44679999999999999999984 34679999999999999999998643 10 0368999999987641 12467999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHh--HCCceEE
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQ--VFKHVVA 250 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~--~F~~v~~ 250 (339)
|+++.++++ ++++. +.+.|+|||.+++... ..+....+.+.+++ -|..+..
T Consensus 175 v~~~~~~~~-----------~~l~~-~~~~L~pgG~l~~~~~------~~~~~~~~~~~l~~~~~f~~~~~ 227 (280)
T 1i9g_A 175 AVLDMLAPW-----------EVLDA-VSRLLVAGGVLMVYVA------TVTQLSRIVEALRAKQCWTEPRA 227 (280)
T ss_dssp EEEESSCGG-----------GGHHH-HHHHEEEEEEEEEEES------SHHHHHHHHHHHHHHSSBCCCEE
T ss_pred EEECCcCHH-----------HHHHH-HHHhCCCCCEEEEEeC------CHHHHHHHHHHHHhcCCcCCcEE
Confidence 999877543 56788 7899999999998752 22345566677775 3544443
No 109
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.17 E-value=7.5e-11 Score=109.79 Aligned_cols=106 Identities=13% Similarity=0.185 Sum_probs=84.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcC------
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRN------ 176 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~------ 176 (339)
.++.+||+||||+|..+..+++.. +..+|++||+++.+++.|++.+..... ..++++++.+|+.+.- ...
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~v~~~~~d~~~~~-~~~~~~~~~ 111 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD--TYKNVSFKISSSDDFK-FLGADSVDK 111 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC---CCTTEEEEECCTTCCG-GGCTTTTTS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC--CCCceEEEEcCHHhCC-ccccccccC
Confidence 467899999999999999999653 678999999999999999998765310 1479999999987642 223
Q ss_pred CceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 177 EKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 177 ~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
++||+|++...-.. +....+++. +++.|+|||.+++
T Consensus 112 ~~fD~V~~~~~l~~-------~~~~~~l~~-~~~~LkpgG~l~i 147 (299)
T 3g5t_A 112 QKIDMITAVECAHW-------FDFEKFQRS-AYANLRKDGTIAI 147 (299)
T ss_dssp SCEEEEEEESCGGG-------SCHHHHHHH-HHHHEEEEEEEEE
T ss_pred CCeeEEeHhhHHHH-------hCHHHHHHH-HHHhcCCCcEEEE
Confidence 68999999865222 234688998 8999999999987
No 110
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.17 E-value=5.4e-11 Score=109.03 Aligned_cols=107 Identities=18% Similarity=0.149 Sum_probs=85.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+||+||||+|..+..+++..+..++++||+++.+++.+++.+.... .++++++.+|+.+. ....++||+|+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~-~~~~~~fD~v~ 110 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG----IKNVKFLQANIFSL-PFEDSSFDHIF 110 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCGGGC-CSCTTCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEcccccC-CCCCCCeeEEE
Confidence 46789999999999999999987777899999999999999999986543 35799999998753 22357899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.. .+ -...+++. +++.|+|||++++..
T Consensus 111 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 111 VCFVLEH--LQ----SPEEALKS-LKKVLKPGGTITVIE 142 (276)
T ss_dssp EESCGGG--CS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Eechhhh--cC----CHHHHHHH-HHHHcCCCcEEEEEE
Confidence 9765321 01 12478998 899999999998753
No 111
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.17 E-value=2.1e-10 Score=100.86 Aligned_cols=149 Identities=12% Similarity=0.029 Sum_probs=98.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+||+||||+|.++..+++. ..++++||+++.+++.+++.+ +++++.+|+.+.- ..++||+|+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~d~~~~~--~~~~fD~v~ 107 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL----------GRPVRTMLFHQLD--AIDAYDAVW 107 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH----------TSCCEECCGGGCC--CCSCEEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc----------CCceEEeeeccCC--CCCcEEEEE
Confidence 45679999999999999999985 368999999999999999875 3556778866532 467899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCcc--------CchhhHHHHHHHHHhH--CCceEEEEE
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIF--------THKEVFSSIYNTIKQV--FKHVVAYTA 253 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~--------~~~~~~~~i~~~l~~~--F~~v~~~~~ 253 (339)
+...-.. .+. -....+++. +++.|+|||++++........ ...-....+.+.+++. |..+.....
T Consensus 108 ~~~~l~~--~~~--~~~~~~l~~-~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 108 AHACLLH--VPR--DELADVLKL-IWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp ECSCGGG--SCH--HHHHHHHHH-HHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred ecCchhh--cCH--HHHHHHHHH-HHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 9754211 000 012478898 799999999998764221000 0011345667777776 666655444
Q ss_pred eecccCC---ceeEEEEecCC
Q 019550 254 HVPSFAD---TWGWVMASDQP 271 (339)
Q Consensus 254 ~iP~~~~---~~~~~~as~~p 271 (339)
....+.+ .|.+++..+.+
T Consensus 183 ~~~~~~~~~~~wl~~~~~~~~ 203 (211)
T 3e23_A 183 EGKGFDQELAQFLHVSVRKPE 203 (211)
T ss_dssp EEECTTSCEEEEEEEEEECCC
T ss_pred cCCCCCCCCceEEEEEEecCc
Confidence 3333432 25455555543
No 112
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.17 E-value=1e-10 Score=103.25 Aligned_cols=150 Identities=14% Similarity=0.018 Sum_probs=102.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.+..+||+||||+|..+..+++.. +..++++||+++.+++.+++.+.... .++++++.+|+.+. ....++||+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~-~~~~~~fD~v 110 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG----LKNVEVLKSEENKI-PLPDNTVDFI 110 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEECBTTBC-SSCSSCEEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEecccccC-CCCCCCeeEE
Confidence 456799999999999999999864 56799999999999999999986543 35899999998653 2234689999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCC-Cc-----cCchhhHHHHHHHHHhH-CCceEEEEEee
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPA-GI-----FTHKEVFSSIYNTIKQV-FKHVVAYTAHV 255 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~-~~-----~~~~~~~~~i~~~l~~~-F~~v~~~~~~i 255 (339)
++...-.. .+ ....+++. +.+.|+|||.+++..-.+ .. ....-....+.+.+++. |..+....
T Consensus 111 ~~~~~l~~--~~----~~~~~l~~-~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~--- 180 (219)
T 3dh0_A 111 FMAFTFHE--LS----EPLKFLEE-LKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVE--- 180 (219)
T ss_dssp EEESCGGG--CS----SHHHHHHH-HHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEE---
T ss_pred Eeehhhhh--cC----CHHHHHHH-HHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEe---
Confidence 99765221 01 13578998 799999999988753111 00 00111235566667766 44444332
Q ss_pred cccCCceeEEEEecC
Q 019550 256 PSFADTWGWVMASDQ 270 (339)
Q Consensus 256 P~~~~~~~~~~as~~ 270 (339)
++..+.++++.|.
T Consensus 181 --~~~~~~~~~~~k~ 193 (219)
T 3dh0_A 181 --VGKYCFGVYAMIV 193 (219)
T ss_dssp --ETTTEEEEEEECC
T ss_pred --eCCceEEEEEEec
Confidence 2334555667664
No 113
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.16 E-value=5.4e-11 Score=115.54 Aligned_cols=128 Identities=19% Similarity=0.227 Sum_probs=95.3
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
++.+|||+|||+|.++..+++. ..+|++||+|+.+++.|++++..+. .+++++.+|+.+.... .++||+|++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~-----~~v~~~~~D~~~~~~~-~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANA-----LKAQALHSDVDEALTE-EARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTT-----CCCEEEECSTTTTSCT-TCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcC-----CCeEEEEcchhhcccc-CCCeEEEEE
Confidence 5679999999999999999985 3699999999999999999987652 3489999998776432 478999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEE
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAY 251 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~ 251 (339)
+++-... .....-...++++. +++.|+|||++++..... . .....+.+.|..+...
T Consensus 305 npp~~~~-~~~~~~~~~~~l~~-~~~~LkpGG~l~iv~n~~-----l----~~~~~l~~~f~~v~~l 360 (381)
T 3dmg_A 305 NPPFHVG-GAVILDVAQAFVNV-AAARLRPGGVFFLVSNPF-----L----KYEPLLEEKFGAFQTL 360 (381)
T ss_dssp CCCCCTT-CSSCCHHHHHHHHH-HHHHEEEEEEEEEEECTT-----S----CHHHHHHHHHSCCEEE
T ss_pred CCchhhc-ccccHHHHHHHHHH-HHHhcCcCcEEEEEEcCC-----C----ChHHHHHHhhccEEEE
Confidence 9874321 00001123578898 799999999998865321 1 1235667778877654
No 114
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.16 E-value=1.5e-10 Score=108.18 Aligned_cols=110 Identities=19% Similarity=0.104 Sum_probs=83.0
Q ss_pred CCCCeEEEEecchhHHHHHHH-hcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREAL-KHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~-~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
+++.+||+||||+|..+..++ +..+..+|++||+++.+++.|++++..... ..+++++.+|+.+.- . .++||+|
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~-~-~~~fD~v 191 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL---AGQITLHRQDAWKLD-T-REGYDLL 191 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT---GGGEEEEECCGGGCC-C-CSCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC---CCceEEEECchhcCC-c-cCCeEEE
Confidence 457899999999999999885 345678999999999999999999865432 357999999987742 2 3789999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
++...-.....+ -....+++. +++.|+|||++++..
T Consensus 192 ~~~~~~~~~~~~---~~~~~~l~~-~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 192 TSNGLNIYEPDD---ARVTELYRR-FWQALKPGGALVTSF 227 (305)
T ss_dssp ECCSSGGGCCCH---HHHHHHHHH-HHHHEEEEEEEEEEC
T ss_pred EECChhhhcCCH---HHHHHHHHH-HHHhcCCCeEEEEEe
Confidence 986642110011 011247898 799999999998764
No 115
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.15 E-value=1.1e-10 Score=113.25 Aligned_cols=107 Identities=21% Similarity=0.232 Sum_probs=86.6
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccc-----------cCCCCeEEEEccHHHHHH
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEA-----------FCSKKLNLVVNDAKAELE 173 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~-----------~~~~rv~v~~~D~~~~l~ 173 (339)
++.+|||+|||+|..+..+++..+..+|+++|+|+..++.+++++..+... .+-.+++++.+|+.+++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 578999999999999999998756678999999999999999999876100 001239999999999987
Q ss_pred hcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 174 KRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 174 ~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
...++||+|++|++. . ..+|++. +.+.|++||++++.+
T Consensus 127 ~~~~~fD~I~lDP~~-----~-----~~~~l~~-a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPFG-----S-----PMEFLDT-ALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCSS-----C-----CHHHHHH-HHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCCC-----C-----HHHHHHH-HHHhcCCCCEEEEEe
Confidence 666789999999862 1 2488888 788999999887753
No 116
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.15 E-value=7.2e-11 Score=114.39 Aligned_cols=119 Identities=13% Similarity=0.159 Sum_probs=87.6
Q ss_pred hHHHHHhhhhcccCCCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHH
Q 019550 90 IYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAK 169 (339)
Q Consensus 90 ~Y~e~l~~~~l~~~~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~ 169 (339)
.|.+++..-... -+.+.|||||||+|.++..+++ .++.+|++||.++ +++.|++....++. ..+++++.+|..
T Consensus 70 aY~~Ai~~~~~~--~~~k~VLDvG~GtGiLs~~Aa~-aGA~~V~ave~s~-~~~~a~~~~~~n~~---~~~i~~i~~~~~ 142 (376)
T 4hc4_A 70 AYRLGILRNWAA--LRGKTVLDVGAGTGILSIFCAQ-AGARRVYAVEASA-IWQQAREVVRFNGL---EDRVHVLPGPVE 142 (376)
T ss_dssp HHHHHHHTTHHH--HTTCEEEEETCTTSHHHHHHHH-TTCSEEEEEECST-THHHHHHHHHHTTC---TTTEEEEESCTT
T ss_pred HHHHHHHhCHHh--cCCCEEEEeCCCccHHHHHHHH-hCCCEEEEEeChH-HHHHHHHHHHHcCC---CceEEEEeeeee
Confidence 566666432221 1467899999999999998887 5788999999997 78999998876653 578999999976
Q ss_pred HHHHhcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 170 AELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 170 ~~l~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+. ..++++|+||++..+.. ....-.-..++.. ..+.|+|||+++-+
T Consensus 143 ~~--~lpe~~DvivsE~~~~~---l~~e~~l~~~l~a-~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 143 TV--ELPEQVDAIVSEWMGYG---LLHESMLSSVLHA-RTKWLKEGGLLLPA 188 (376)
T ss_dssp TC--CCSSCEEEEECCCCBTT---BTTTCSHHHHHHH-HHHHEEEEEEEESC
T ss_pred ee--cCCccccEEEeeccccc---ccccchhhhHHHH-HHhhCCCCceECCc
Confidence 64 34588999999876432 1112123466666 67899999998743
No 117
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.15 E-value=4.2e-11 Score=110.91 Aligned_cols=105 Identities=12% Similarity=0.122 Sum_probs=84.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.++.+||+||||+|..+..+++..+ ..+|+++|+++.+++.|++.+... .++++++.+|+.++. .+++||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~--~~~~fD~v 93 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-----PYDSEFLEGDATEIE--LNDKYDIA 93 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-----SSEEEEEESCTTTCC--CSSCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcchhhcC--cCCCeeEE
Confidence 4678999999999999999998765 479999999999999999987653 358999999987632 24689999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
++...-.. .+ -...+++. +++.|+|||.+++..
T Consensus 94 ~~~~~l~~--~~----~~~~~l~~-~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 94 ICHAFLLH--MT----TPETMLQK-MIHSVKKGGKIICFE 126 (284)
T ss_dssp EEESCGGG--CS----SHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred EECChhhc--CC----CHHHHHHH-HHHHcCCCCEEEEEe
Confidence 99875221 11 12588998 899999999998764
No 118
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.15 E-value=2.4e-10 Score=113.33 Aligned_cols=134 Identities=11% Similarity=0.057 Sum_probs=96.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.+..+|||+|||.|+.+..+++.. +..+|+++|+++..++.+++++...+ -.+++++.+|+.++.....++||+|
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g----~~nv~v~~~Da~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG----VSNAIVTNHAPAELVPHFSGFFDRI 179 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT----CSSEEEECCCHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCceEEEeCCHHHhhhhccccCCEE
Confidence 346789999999999999988753 34789999999999999999987653 2579999999998765456789999
Q ss_pred EecCCCCCCC----Ccc-------cc-----CCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCC
Q 019550 183 FGDLADPVEG----GPC-------YQ-----LYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFK 246 (339)
Q Consensus 183 i~D~~d~~~~----~p~-------~~-----L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~ 246 (339)
++|++-...+ .|. .. -...++++. +.+.|+|||+|+..+.+. ..+....+++.+.+.++
T Consensus 180 l~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~-a~~~LkpGG~LvYsTCs~----~~eEne~vv~~~l~~~~ 254 (456)
T 3m4x_A 180 VVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSS-AIKMLKNKGQLIYSTCTF----APEENEEIISWLVENYP 254 (456)
T ss_dssp EEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHH-HHHTEEEEEEEEEEESCC----CGGGTHHHHHHHHHHSS
T ss_pred EECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEEeec----ccccCHHHHHHHHHhCC
Confidence 9999732100 010 00 012367888 788999999998776543 23344555666655555
No 119
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.15 E-value=4.2e-10 Score=101.90 Aligned_cols=151 Identities=9% Similarity=0.040 Sum_probs=103.1
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
++..+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++..++. ..+++++.+|+.+.+.. .++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl---~~~I~~~~gD~l~~~~~-~~~~D~Iv 95 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL---TSKIDVRLANGLSAFEE-ADNIDTIT 95 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC---TTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEECchhhcccc-ccccCEEE
Confidence 455789999999999999999876677999999999999999999876643 46899999999876532 23799988
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeecccCCcee
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWG 263 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~~~~~ 263 (339)
+..- ... .-.+++.. ..+.|+++|.|+++.. .. ...+.+.|.+....+.-... +..-+..+.
T Consensus 96 iaGm-------Gg~-lI~~IL~~-~~~~l~~~~~lIlqp~-----~~---~~~lr~~L~~~Gf~i~~E~l-v~e~~~~Ye 157 (230)
T 3lec_A 96 ICGM-------GGR-LIADILNN-DIDKLQHVKTLVLQPN-----NR---EDDLRKWLAANDFEIVAEDI-LTENDKRYE 157 (230)
T ss_dssp EEEE-------CHH-HHHHHHHH-TGGGGTTCCEEEEEES-----SC---HHHHHHHHHHTTEEEEEEEE-EEC--CEEE
T ss_pred EeCC-------chH-HHHHHHHH-HHHHhCcCCEEEEECC-----CC---hHHHHHHHHHCCCEEEEEEE-EEECCEEEE
Confidence 7422 111 23578888 7889999999999842 12 34566777765332322211 221122223
Q ss_pred EEEEecCCCCCCH
Q 019550 264 WVMASDQPFSINA 276 (339)
Q Consensus 264 ~~~as~~p~~~~~ 276 (339)
++.+++.+.+++.
T Consensus 158 ii~~~~~~~~~~~ 170 (230)
T 3lec_A 158 ILVVKHGHMNLTA 170 (230)
T ss_dssp EEEEEECCCCCCH
T ss_pred EEEEEeCCCCCCH
Confidence 4566665444443
No 120
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.14 E-value=6e-11 Score=107.90 Aligned_cols=104 Identities=21% Similarity=0.338 Sum_probs=81.1
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|.++..+++.. .+|+++|+++.+++.|++.+.... .++++++.+|+.+ +.-..++||+|+
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~----~~~v~~~~~d~~~-l~~~~~~fD~V~ 108 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNG----HQQVEYVQGDAEQ-MPFTDERFHIVT 108 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCC-C-CCSCTTCEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEEecHHh-CCCCCCCEEEEE
Confidence 457899999999999999998864 499999999999999999876442 3679999999865 222347899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-... + -...+++. +++.|+|||.+++.
T Consensus 109 ~~~~l~~~--~----d~~~~l~~-~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 109 CRIAAHHF--P----NPASFVSE-AYRVLKKGGQLLLV 139 (260)
T ss_dssp EESCGGGC--S----CHHHHHHH-HHHHEEEEEEEEEE
T ss_pred EhhhhHhc--C----CHHHHHHH-HHHHcCCCCEEEEE
Confidence 98642210 1 12478998 79999999998875
No 121
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.14 E-value=8.4e-11 Score=112.67 Aligned_cols=107 Identities=18% Similarity=0.271 Sum_probs=82.1
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
+.++||+||||+|.++..+++. +..+|++||+++ +++.|++....+.. .++++++.+|+.+. ....++||+|++
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~~---~~~v~~~~~d~~~~-~~~~~~fD~Iis 139 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANKL---DHVVTIIKGKVEEV-ELPVEKVDIIIS 139 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC---TTTEEEEESCTTTC-CCSSSCEEEEEE
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcCC---CCcEEEEECcHHHc-cCCCCceEEEEE
Confidence 5689999999999999999985 677999999995 99999998875532 46799999998765 222478999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+..... ....-....+++. +.+.|+|||+++..
T Consensus 140 ~~~~~~---l~~~~~~~~~l~~-~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 140 EWMGYC---LFYESMLNTVLHA-RDKWLAPDGLIFPD 172 (349)
T ss_dssp CCCBBT---BTBTCCHHHHHHH-HHHHEEEEEEEESC
T ss_pred cccccc---ccCchhHHHHHHH-HHHhCCCCCEEccc
Confidence 874221 0011123567887 78999999998744
No 122
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.14 E-value=1.2e-10 Score=106.52 Aligned_cols=107 Identities=15% Similarity=0.124 Sum_probs=83.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++.. ..+|+++|+++.+++.+++.+..... .++++++.+|+.+. ....++||+|+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~-~~~~~~fD~v~ 134 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGL---ANRVTFSYADAMDL-PFEDASFDAVW 134 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECCTTSC-CSCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCC---CcceEEEECccccC-CCCCCCccEEE
Confidence 456799999999999999998865 47999999999999999998765432 46899999998652 22346899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.. .+ -...+++. +++.|+|||.+++..
T Consensus 135 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 135 ALESLHH--MP----DRGRALRE-MARVLRPGGTVAIAD 166 (273)
T ss_dssp EESCTTT--SS----CHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred Eechhhh--CC----CHHHHHHH-HHHHcCCCeEEEEEE
Confidence 8654222 11 12588999 899999999988764
No 123
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.14 E-value=2.3e-11 Score=107.47 Aligned_cols=107 Identities=9% Similarity=0.039 Sum_probs=76.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhc--------cccCCCCeEEEEccHHHHHHhc
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQ--------EAFCSKKLNLVVNDAKAELEKR 175 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~--------~~~~~~rv~v~~~D~~~~l~~~ 175 (339)
+++.+||++|||+|..+.++++. + .+|++||+++.+++.|++...... ..+..++++++++|+.+.-...
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~-g-~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ-G-YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH-C-CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC-C-CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 46789999999999999999985 3 589999999999999998754210 0011468999999987642111
Q ss_pred CCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcE
Q 019550 176 NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGI 217 (339)
Q Consensus 176 ~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGi 217 (339)
.++||+|++...-.. -+. -....+++. +++.|+|||.
T Consensus 99 ~~~fD~v~~~~~l~~--l~~--~~~~~~l~~-~~r~LkpgG~ 135 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIA--LPA--DMRERYVQH-LEALMPQACS 135 (203)
T ss_dssp HHSEEEEEEESCGGG--SCH--HHHHHHHHH-HHHHSCSEEE
T ss_pred CCCEEEEEECcchhh--CCH--HHHHHHHHH-HHHHcCCCcE
Confidence 157999997543111 010 012357888 7999999997
No 124
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.14 E-value=7.7e-11 Score=104.13 Aligned_cols=101 Identities=17% Similarity=0.096 Sum_probs=78.5
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
++.+||+||||+|..+..+++. ..+++++|+++.+++.+++.++ ++++++.+|+.+.- . .++||+|++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~~~~-~-~~~fD~v~~ 112 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFLSFE-V-PTSIDTIVS 112 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSSSCC-C-CSCCSEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChhhcC-C-CCCeEEEEE
Confidence 5779999999999999999985 4689999999999999998854 47889999987642 2 278999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
...-.. -+ ......+++. +++.|+|||.+++..
T Consensus 113 ~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 113 TYAFHH--LT--DDEKNVAIAK-YSQLLNKGGKIVFAD 145 (220)
T ss_dssp ESCGGG--SC--HHHHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred Ccchhc--CC--hHHHHHHHHH-HHHhcCCCCEEEEEe
Confidence 864221 01 0011248898 799999999998864
No 125
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.14 E-value=2.5e-10 Score=107.86 Aligned_cols=115 Identities=18% Similarity=0.087 Sum_probs=85.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.+..+|||+|||.|+.+..+++.. +..+|+++|+++.+++.+++++...+ -++++++.+|+.++.. ..++||+|
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g----~~~v~~~~~D~~~~~~-~~~~fD~I 191 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG----VLNVILFHSSSLHIGE-LNVEFDKI 191 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT----CCSEEEESSCGGGGGG-GCCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC----CCeEEEEECChhhccc-ccccCCEE
Confidence 345789999999999999999764 34799999999999999999987553 2579999999987643 35689999
Q ss_pred EecCCCCCCC----Ccc-ccCC-----------cHHHHHHHHccccCCCcEEEEecCC
Q 019550 183 FGDLADPVEG----GPC-YQLY-----------TKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 183 i~D~~d~~~~----~p~-~~L~-----------t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
++|++-.... .|. .... ..++++. +.+.|+|||+++..+.+
T Consensus 192 l~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~-~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 192 LLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEK-GLEVLKPGGILVYSTCS 248 (315)
T ss_dssp EEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEESC
T ss_pred EEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHH-HHHhCCCCCEEEEEeCC
Confidence 9998732100 010 0001 1478888 78999999999886644
No 126
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.14 E-value=9.7e-11 Score=101.44 Aligned_cols=105 Identities=12% Similarity=0.107 Sum_probs=81.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++. ..+++++|+++.+++.+++.+.... .++++++.+|+.+.- . .++||+|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~-~-~~~~D~v~ 102 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIEN----LDNLHTRVVDLNNLT-F-DRQYDFIL 102 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEECCGGGCC-C-CCCEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCC----CCCcEEEEcchhhCC-C-CCCceEEE
Confidence 35679999999999999999985 3689999999999999999876542 257999999987642 2 57899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-.. .+. -....+++. +++.|+|||.+++.
T Consensus 103 ~~~~l~~--~~~--~~~~~~l~~-~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 103 STVVLMF--LEA--KTIPGLIAN-MQRCTKPGGYNLIV 135 (199)
T ss_dssp EESCGGG--SCG--GGHHHHHHH-HHHTEEEEEEEEEE
T ss_pred Ecchhhh--CCH--HHHHHHHHH-HHHhcCCCeEEEEE
Confidence 8865221 010 023578898 79999999986653
No 127
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.14 E-value=5.1e-11 Score=107.80 Aligned_cols=101 Identities=14% Similarity=0.183 Sum_probs=82.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|.++..+++..+..+++++|+++.+++.+++. .++++++.+|+.+.. ..++||+|+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~---------~~~~~~~~~d~~~~~--~~~~fD~v~ 100 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR---------LPNTNFGKADLATWK--PAQKADLLY 100 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH---------STTSEEEECCTTTCC--CSSCEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---------CCCcEEEECChhhcC--ccCCcCEEE
Confidence 456899999999999999999876667899999999999999987 257899999987643 457899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-... + -...+++. +++.|+|||.+++..
T Consensus 101 ~~~~l~~~--~----~~~~~l~~-~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 101 ANAVFQWV--P----DHLAVLSQ-LMDQLESGGVLAVQM 132 (259)
T ss_dssp EESCGGGS--T----THHHHHHH-HGGGEEEEEEEEEEE
T ss_pred EeCchhhC--C----CHHHHHHH-HHHhcCCCeEEEEEe
Confidence 97652220 1 13578898 899999999998875
No 128
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.13 E-value=1.6e-10 Score=106.67 Aligned_cols=106 Identities=15% Similarity=0.176 Sum_probs=81.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++..+ .+|++||+++.+++.|++.+..... .++++++.+|+.++ +++||+|+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~----~~~fD~v~ 134 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSEN---LRSKRVLLAGWEQF----DEPVDRIV 134 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCC---CSCEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCC---CCCeEEEECChhhC----CCCeeEEE
Confidence 4567999999999999999995455 4999999999999999998764322 46899999998543 37899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-... ++ -....+++. +++.|+|||.+++..
T Consensus 135 ~~~~l~~~-~~---~~~~~~l~~-~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 135 SIGAFEHF-GH---ERYDAFFSL-AHRLLPADGVMLLHT 168 (287)
T ss_dssp EESCGGGT-CT---TTHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred EeCchhhc-Ch---HHHHHHHHH-HHHhcCCCCEEEEEE
Confidence 87531110 00 013588998 799999999998864
No 129
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.13 E-value=8.2e-11 Score=114.59 Aligned_cols=104 Identities=20% Similarity=0.204 Sum_probs=86.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCC-eEEEEccHHHHHH-hcCCceeE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKK-LNLVVNDAKAELE-KRNEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~r-v~v~~~D~~~~l~-~~~~~yDv 181 (339)
+..+|||+++|+|..+.++++.. ++.+|++||+|+..++.+++++..++. +.+ ++++.+|+.++++ ...++||+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl---~~~~v~v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI---PEDRYEIHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC---CGGGEEEECSCHHHHHHSCCSSCEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC---CCceEEEEeCCHHHHHHHhhCCCCcE
Confidence 35789999999999999999853 457899999999999999999988753 345 9999999999998 66678999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
|++|++ +. ..+|++. +.+.|++||++.+.+
T Consensus 129 V~lDP~-----g~-----~~~~l~~-a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDPF-----GT-----PVPFIES-VALSMKRGGILSLTA 158 (392)
T ss_dssp EEECCS-----SC-----CHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEECCC-----cC-----HHHHHHH-HHHHhCCCCEEEEEe
Confidence 999984 21 2468888 788999999888754
No 130
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.13 E-value=2.1e-10 Score=96.64 Aligned_cols=126 Identities=20% Similarity=0.296 Sum_probs=87.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHH-----H--hc
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAEL-----E--KR 175 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l-----~--~~ 175 (339)
.+..+||++|||+|..+..+++.. +..+++++|+++ +++. ++++++.+|+.+.- . ..
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------VGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------------TTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------------CcEEEEEcccccchhhhhhhccCC
Confidence 356799999999999999999863 457999999999 6431 57899999987651 1 23
Q ss_pred CCceeEEEecCCCCCCCCcc-ccC----CcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEE
Q 019550 176 NEKFDVIFGDLADPVEGGPC-YQL----YTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVA 250 (339)
Q Consensus 176 ~~~yDvIi~D~~d~~~~~p~-~~L----~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~ 250 (339)
.++||+|+++.+-.....+. ... ....+++. +.+.|+|||.+++.... ......+.+.++..|..+..
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~L~~gG~l~~~~~~------~~~~~~~~~~~~~~~~~~~~ 158 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEM-CRDVLAPGGSFVVKVFQ------GEGFDEYLREIRSLFTKVKV 158 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEEES------STTHHHHHHHHHHHEEEEEE
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHH-HHHHcCCCcEEEEEEec------CCcHHHHHHHHHHhhhhEEe
Confidence 46899999987643211100 000 01578888 79999999999886421 12345566777777776654
Q ss_pred E
Q 019550 251 Y 251 (339)
Q Consensus 251 ~ 251 (339)
.
T Consensus 159 ~ 159 (180)
T 1ej0_A 159 R 159 (180)
T ss_dssp E
T ss_pred e
Confidence 4
No 131
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.13 E-value=1e-10 Score=107.17 Aligned_cols=109 Identities=13% Similarity=-0.001 Sum_probs=78.5
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhh-------c-cc-----cCCCCeEEEEccHHHH
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVN-------Q-EA-----FCSKKLNLVVNDAKAE 171 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~-------~-~~-----~~~~rv~v~~~D~~~~ 171 (339)
.+.+||++|||+|..+.++++. + .+|++||+++.+++.|++..... . .. -..++++++++|+.+.
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~-G-~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR-G-HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT-T-CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC-C-CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 5679999999999999999984 4 58999999999999998765320 0 00 0147899999998774
Q ss_pred HHhcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 172 LEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 172 l~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
-....++||+|+....-.. -+.. ....+++. +++.|+|||++++
T Consensus 146 ~~~~~~~FD~V~~~~~l~~--l~~~--~~~~~l~~-~~~~LkpGG~l~l 189 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVA--INPG--DHDRYADI-ILSLLRKEFQYLV 189 (252)
T ss_dssp GGGCCCCEEEEEESSSTTT--SCGG--GHHHHHHH-HHHTEEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhh--CCHH--HHHHHHHH-HHHHcCCCeEEEE
Confidence 3222378999997643211 1110 13468888 7999999999853
No 132
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.13 E-value=2.1e-11 Score=110.78 Aligned_cols=112 Identities=16% Similarity=0.135 Sum_probs=80.1
Q ss_pred CCCeEEEEecchhHHHHHHHhc--CCCCEEEEEEcCHHHHHHHHHhhhhh---ccccCCCC-------------------
Q 019550 105 NPKTVFIMGGGEGSAAREALKH--KSLEKVVMCDIDQEVVDFCRRFLTVN---QEAFCSKK------------------- 160 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ar~~f~~~---~~~~~~~r------------------- 160 (339)
.+.+||++|||+|.++..+++. .+..+|+++|+|+.+++.|++++... .. ..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL---TARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH---HHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc---cccchhhhhhhhhcccccchhh
Confidence 4678999999999999999876 45578999999999999999886533 11 011
Q ss_pred ------eE-------------EEEccHHHHHHh----cCCceeEEEecCCCCCCCCccc---cCCcHHHHHHHHccccCC
Q 019550 161 ------LN-------------LVVNDAKAELEK----RNEKFDVIFGDLADPVEGGPCY---QLYTKSFYERILKPKLND 214 (339)
Q Consensus 161 ------v~-------------v~~~D~~~~l~~----~~~~yDvIi~D~~d~~~~~p~~---~L~t~ef~~~~~~~~L~~ 214 (339)
++ ++.+|..+.+.. ...+||+|+++++-........ .-....+++. +.+.|+|
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~-~~~~Lkp 206 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRS-LASALPA 206 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHH-HHHHSCT
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHH-HHHhcCC
Confidence 55 999998775431 3348999999975211000000 0112478888 7899999
Q ss_pred CcEEEE
Q 019550 215 NGIFVT 220 (339)
Q Consensus 215 gGilv~ 220 (339)
||++++
T Consensus 207 gG~l~~ 212 (250)
T 1o9g_A 207 HAVIAV 212 (250)
T ss_dssp TCEEEE
T ss_pred CcEEEE
Confidence 999988
No 133
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.13 E-value=3.7e-11 Score=107.45 Aligned_cols=92 Identities=20% Similarity=0.253 Sum_probs=75.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-CCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-NEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~yDvI 182 (339)
+++.+||+||||+|..+..+++. ..+|+++|+++.+++.+++. .++++++.+|+.+.+... .++||+|
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN---------APHADVYEWNGKGELPAGLGAPFGLI 115 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH---------CTTSEEEECCSCSSCCTTCCCCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh---------CCCceEEEcchhhccCCcCCCCEEEE
Confidence 45789999999999999999986 46999999999999999987 257999999986545433 5789999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEE
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFV 219 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv 219 (339)
++.. ++. .+++. +++.|+|||.++
T Consensus 116 ~~~~-~~~-----------~~l~~-~~~~LkpgG~l~ 139 (226)
T 3m33_A 116 VSRR-GPT-----------SVILR-LPELAAPDAHFL 139 (226)
T ss_dssp EEES-CCS-----------GGGGG-HHHHEEEEEEEE
T ss_pred EeCC-CHH-----------HHHHH-HHHHcCCCcEEE
Confidence 9982 221 44666 688999999998
No 134
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.12 E-value=1.2e-10 Score=102.28 Aligned_cols=99 Identities=14% Similarity=0.175 Sum_probs=80.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
++..+||+||||+|.++..+++. ..+++++|+++.+++.+++. ..++++++.+|+.+. ...++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~~d~~~~--~~~~~~D~v~ 112 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRH--------GLDNVEFRQQDLFDW--TPDRQWDAVF 112 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGG--------CCTTEEEEECCTTSC--CCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhc--------CCCCeEEEecccccC--CCCCceeEEE
Confidence 44579999999999999999986 46999999999999999981 137899999998776 3457899999
Q ss_pred ecCCCCCCCCccccCCc---HHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYT---KSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t---~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-. ++-. ..+++. +++.|+|||.+++..
T Consensus 113 ~~~~l~-------~~~~~~~~~~l~~-~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 113 FAHWLA-------HVPDDRFEAFWES-VRSAVAPGGVVEFVD 146 (218)
T ss_dssp EESCGG-------GSCHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Eechhh-------cCCHHHHHHHHHH-HHHHcCCCeEEEEEe
Confidence 976421 1222 578898 799999999998765
No 135
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.12 E-value=1.4e-10 Score=112.27 Aligned_cols=107 Identities=19% Similarity=0.194 Sum_probs=82.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+.++||+||||+|.++..+++. +..+|++||++ .+++.|++++..+.. .++++++.+|+.++. .+++||+|+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~--~~~~~D~Iv 134 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNL---DHIVEVIEGSVEDIS--LPEKVDVII 134 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTC---TTTEEEEESCGGGCC--CSSCEEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCC---CCeEEEEECchhhcC--cCCcceEEE
Confidence 45689999999999999999985 56799999999 999999999876542 467999999987642 237899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
++..... ....-....+++. +.+.|+|||+++..
T Consensus 135 ~~~~~~~---l~~e~~~~~~l~~-~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 135 SEWMGYF---LLRESMFDSVISA-RDRWLKPTGVMYPS 168 (376)
T ss_dssp ECCCBTT---BTTTCTHHHHHHH-HHHHEEEEEEEESS
T ss_pred EcChhhc---ccchHHHHHHHHH-HHhhCCCCeEEEEe
Confidence 9874221 0011123467887 78999999999764
No 136
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.12 E-value=1.1e-10 Score=105.62 Aligned_cols=103 Identities=20% Similarity=0.238 Sum_probs=82.2
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
++++||+||||+|..+..+++. +..+|+++|+++.+++.|++.+. .++++++.+|+.+. ....++||+|++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~-~~~~~~fD~v~~ 114 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTT-------SPVVCYEQKAIEDI-AIEPDAYNVVLS 114 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCC-------CTTEEEEECCGGGC-CCCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhc-------cCCeEEEEcchhhC-CCCCCCeEEEEE
Confidence 5789999999999999999985 34599999999999999999865 37899999998653 223578999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
...-... + ....+++. +++.|+|||.+++...
T Consensus 115 ~~~l~~~--~----~~~~~l~~-~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 115 SLALHYI--A----SFDDICKK-VYINLKSSGSFIFSVE 146 (253)
T ss_dssp ESCGGGC--S----CHHHHHHH-HHHHEEEEEEEEEEEE
T ss_pred chhhhhh--h----hHHHHHHH-HHHHcCCCcEEEEEeC
Confidence 7642210 0 13588998 7999999999998753
No 137
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.12 E-value=2.9e-10 Score=102.22 Aligned_cols=101 Identities=16% Similarity=0.159 Sum_probs=79.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvI 182 (339)
+++++||+||||+|.++..+++. ..+|++||+++.+++.+++. ++++.+|+.+++.. ..++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~------------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK------------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT------------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh------------cceeeccHHHHhhhcCCCCeeEE
Confidence 45689999999999999998885 35799999999999998864 67889999888744 35789999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
++...-.. -+.. .-..+++. +++.|+|||.+++...
T Consensus 106 ~~~~~l~~--~~~~--~~~~~l~~-~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 106 MISHFVEH--LDPE--RLFELLSL-CYSKMKYSSYIVIESP 141 (240)
T ss_dssp EEESCGGG--SCGG--GHHHHHHH-HHHHBCTTCCEEEEEE
T ss_pred EECCchhh--CCcH--HHHHHHHH-HHHHcCCCcEEEEEeC
Confidence 98654211 0100 12588999 8999999999988753
No 138
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.11 E-value=1.1e-10 Score=104.22 Aligned_cols=100 Identities=11% Similarity=0.163 Sum_probs=79.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++.. .+|++||+++.+++.|++.+. ++++++.+|+.+. ...++||+|+
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~--------~~v~~~~~d~~~~--~~~~~fD~v~ 108 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLK--------DGITYIHSRFEDA--QLPRRYDNIV 108 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSC--------SCEEEEESCGGGC--CCSSCEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhh--------CCeEEEEccHHHc--CcCCcccEEE
Confidence 356789999999999999998753 479999999999999998753 1799999998775 2457899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHc-cccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILK-PKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~-~~L~~gGilv~~~ 222 (339)
+...-.. -+ -...+++. ++ +.|+|||.+++..
T Consensus 109 ~~~~l~~--~~----~~~~~l~~-~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 109 LTHVLEH--ID----DPVALLKR-INDDWLAEGGRLFLVC 141 (250)
T ss_dssp EESCGGG--CS----SHHHHHHH-HHHTTEEEEEEEEEEE
T ss_pred EhhHHHh--hc----CHHHHHHH-HHHHhcCCCCEEEEEc
Confidence 8764211 01 12578999 89 9999999998865
No 139
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.11 E-value=1.3e-10 Score=107.17 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=81.1
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
++.+||+||||+|..+..+++. + .+|++||+++.+++.|++.+.... -+++++.+|+.+... .++||+|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~-g-~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~~--~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL-G-YDVTSWDHNENSIAFLNETKEKEN-----LNISTALYDINAANI--QENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCGGGCCC--CSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHHHHHcC-----CceEEEEeccccccc--cCCccEEEE
Confidence 5789999999999999999985 3 599999999999999999987542 389999999876432 678999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
...-.. .+ .-....+++. +++.|+|||++++.
T Consensus 191 ~~~~~~--~~--~~~~~~~l~~-~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 191 TVVFMF--LN--RERVPSIIKN-MKEHTNVGGYNLIV 222 (286)
T ss_dssp CSSGGG--SC--GGGHHHHHHH-HHHTEEEEEEEEEE
T ss_pred ccchhh--CC--HHHHHHHHHH-HHHhcCCCcEEEEE
Confidence 875221 00 0113478998 79999999986654
No 140
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.11 E-value=2.7e-11 Score=108.95 Aligned_cols=103 Identities=16% Similarity=0.079 Sum_probs=80.1
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
++.+|||+|||+|..+..+++. + .+|++||+++.+++.|++++..... .++++++.+|+.++. ..++||+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~~--~~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT-G-MRVIAIDIDPVKIALARNNAEVYGI---ADKIEFICGDFLLLA--SFLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHTTC---GGGEEEEESCHHHHG--GGCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHHHc-C-CEEEEEECCHHHHHHHHHHHHHcCC---CcCeEEEECChHHhc--ccCCCCEEEE
Confidence 5689999999999999999985 3 7999999999999999999875431 258999999998875 3478999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+++-.....+ ...+.. +++.|+|||++++.
T Consensus 151 ~~~~~~~~~~------~~~~~~-~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 151 SPPWGGPDYA------TAETFD-IRTMMSPDGFEIFR 180 (241)
T ss_dssp CCCCSSGGGG------GSSSBC-TTTSCSSCHHHHHH
T ss_pred CCCcCCcchh------hhHHHH-HHhhcCCcceeHHH
Confidence 9864321011 112335 68899999997754
No 141
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.11 E-value=1.3e-10 Score=111.28 Aligned_cols=113 Identities=17% Similarity=0.093 Sum_probs=85.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.+..+|||+|||+|+++.+++... +..+|+++|+|+.+++.|++++...+. ++++++.+|+.++.. ..+.||+|
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~----~~i~~~~~D~~~~~~-~~~~~D~I 276 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL----SWIRFLRADARHLPR-FFPEVDRI 276 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC----TTCEEEECCGGGGGG-TCCCCSEE
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC----CceEEEeCChhhCcc-ccCCCCEE
Confidence 346789999999999999999865 568899999999999999999876532 389999999987532 34569999
Q ss_pred EecCCCCCCCCccccC--CcHHHHHHHHccccCCCcEEEEec
Q 019550 183 FGDLADPVEGGPCYQL--YTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L--~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
++|++-....+....+ .-.++++. +++.|+|||.+++-+
T Consensus 277 i~npPyg~r~~~~~~~~~~~~~~~~~-~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 277 LANPPHGLRLGRKEGLFHLYWDFLRG-ALALLPPGGRVALLT 317 (354)
T ss_dssp EECCCSCC----CHHHHHHHHHHHHH-HHHTSCTTCEEEEEE
T ss_pred EECCCCcCccCCcccHHHHHHHHHHH-HHHhcCCCcEEEEEe
Confidence 9999854311111111 11577888 799999999998864
No 142
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.11 E-value=1.8e-10 Score=100.52 Aligned_cols=100 Identities=8% Similarity=0.036 Sum_probs=79.3
Q ss_pred CCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEec
Q 019550 106 PKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGD 185 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D 185 (339)
+.+||+||||+|..+..+++. ..++++||+++.+++.+++. .++++++.+|+.+. ....++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~---------~~~~~~~~~d~~~~-~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQT---------HPSVTFHHGTITDL-SDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHH---------CTTSEEECCCGGGG-GGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHh---------CCCCeEEeCccccc-ccCCCCeEEEEeh
Confidence 779999999999999999885 35899999999999999987 25789999998763 3345789999997
Q ss_pred CCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 186 LADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 186 ~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
..-.. .+ .-....+++. +++.|+|||.+++..
T Consensus 110 ~~l~~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 110 YSLIH--MG--PGELPDALVA-LRMAVEDGGGLLMSF 141 (203)
T ss_dssp SSSTT--CC--TTTHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred hhHhc--CC--HHHHHHHHHH-HHHHcCCCcEEEEEE
Confidence 64221 01 0123588998 799999999998764
No 143
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.11 E-value=1.2e-10 Score=111.16 Aligned_cols=114 Identities=14% Similarity=0.193 Sum_probs=89.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+.++||++|||+|.++.. ++ +..+|++||+++.+++.+++++..++. .++++++.+|+.+++ ++||+|+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l---~~~v~~~~~D~~~~~----~~fD~Vi 263 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKL---EHKIIPILSDVREVD----VKGNRVI 263 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEESCGGGCC----CCEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEECChHHhc----CCCcEEE
Confidence 3567999999999999999 76 478999999999999999999887642 358999999998876 7899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHC
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVF 245 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F 245 (339)
+|++.. ..++++. +.+.|+|||++++...++ . .....+.+++.+
T Consensus 264 ~dpP~~----------~~~~l~~-~~~~L~~gG~l~~~~~~~----~---~~~~~~~l~~~~ 307 (336)
T 2yx1_A 264 MNLPKF----------AHKFIDK-ALDIVEEGGVIHYYTIGK----D---FDKAIKLFEKKC 307 (336)
T ss_dssp ECCTTT----------GGGGHHH-HHHHEEEEEEEEEEEEES----S---SHHHHHHHHHHS
T ss_pred ECCcHh----------HHHHHHH-HHHHcCCCCEEEEEEeec----C---chHHHHHHHHhc
Confidence 997522 1277888 788999999988765332 1 334455566654
No 144
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.11 E-value=1.6e-10 Score=103.97 Aligned_cols=106 Identities=20% Similarity=0.227 Sum_probs=80.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
++.+||+||||+|..+..+++.. ..+|++||+++.+++.|++++.... ..+++++.+|+.+.. ...++||+|++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~-~~~~~fD~v~~ 152 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG----KRVRNYFCCGLQDFT-PEPDSYDVIWI 152 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG----GGEEEEEECCGGGCC-CCSSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC----CceEEEEEcChhhcC-CCCCCEEEEEE
Confidence 47899999999999999888754 5699999999999999999986542 257899999976532 23458999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+..-.. -+.. ....+++. +++.|+|||++++.
T Consensus 153 ~~~l~~--~~~~--~~~~~l~~-~~~~LkpgG~l~i~ 184 (241)
T 2ex4_A 153 QWVIGH--LTDQ--HLAEFLRR-CKGSLRPNGIIVIK 184 (241)
T ss_dssp ESCGGG--SCHH--HHHHHHHH-HHHHEEEEEEEEEE
T ss_pred cchhhh--CCHH--HHHHHHHH-HHHhcCCCeEEEEE
Confidence 854211 0100 01378898 79999999999874
No 145
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.10 E-value=8.9e-11 Score=105.18 Aligned_cols=105 Identities=16% Similarity=0.138 Sum_probs=80.7
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
++.+||+||||+|..+..+++ ...+|++||+++.+++.|++.+..... ..+++++.+|+.++. ..++||+|++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~--~~~~fD~v~~ 138 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPK---AEYFSFVKEDVFTWR--PTELFDLIFD 138 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGG---GGGEEEECCCTTTCC--CSSCEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCC---CcceEEEECchhcCC--CCCCeeEEEE
Confidence 356999999999999998876 357899999999999999998764221 367999999987643 3468999998
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
...-.. -+ .-....+++. +++.|+|||.+++.
T Consensus 139 ~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~~~ 170 (235)
T 3lcc_A 139 YVFFCA--IE--PEMRPAWAKS-MYELLKPDGELITL 170 (235)
T ss_dssp ESSTTT--SC--GGGHHHHHHH-HHHHEEEEEEEEEE
T ss_pred Chhhhc--CC--HHHHHHHHHH-HHHHCCCCcEEEEE
Confidence 654221 11 0123578898 79999999998874
No 146
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.10 E-value=1.2e-10 Score=105.45 Aligned_cols=106 Identities=17% Similarity=0.193 Sum_probs=82.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++.. ..+|++||+++.+++.|++.+... ++++++.+|+.+. ....++||+|+
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~-~~~~~~fD~v~ 125 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN------NKIIFEANDILTK-EFPENNFDLIY 125 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC------TTEEEEECCTTTC-CCCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC------CCeEEEECccccC-CCCCCcEEEEe
Confidence 456799999999999999999865 479999999999999999986432 7899999998663 22357899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.. -+ .-....+++. +++.|+|||.+++..
T Consensus 126 ~~~~l~~--~~--~~~~~~~l~~-~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 126 SRDAILA--LS--LENKNKLFQK-CYKWLKPTGTLLITD 159 (266)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred HHHHHHh--cC--hHHHHHHHHH-HHHHcCCCCEEEEEE
Confidence 9754211 00 0123578898 799999999998764
No 147
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.10 E-value=1e-09 Score=99.58 Aligned_cols=147 Identities=14% Similarity=0.189 Sum_probs=102.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhc-CCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHH--hcCCcee
Q 019550 104 QNPKTVFIMGGGEGSAAREALKH-KSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELE--KRNEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~--~~~~~yD 180 (339)
.+..+||+||||+|.++..+++. -+..+|++||+++++++.+++.... .+++..+.+|+..... ...+.+|
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~------~~ni~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD------RRNIFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT------CTTEEEEESCTTCGGGGTTTCCCEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh------hcCeeEEEEeccCccccccccceEE
Confidence 45678999999999999999975 3567999999999999999887543 3689999999875422 2347899
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCc---cCchhhHHHHHHHHHhH-CCceEEEEEeec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGI---FTHKEVFSSIYNTIKQV-FKHVVAYTAHVP 256 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~---~~~~~~~~~i~~~l~~~-F~~v~~~~~~iP 256 (339)
+|++|...+. ....++++ +++.|||||.+++.....+. ......+....+.|++. |..+.. ....
T Consensus 150 vVf~d~~~~~--------~~~~~l~~-~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~--i~L~ 218 (233)
T 4df3_A 150 GLYADVAQPE--------QAAIVVRN-ARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDV--VHLD 218 (233)
T ss_dssp EEEECCCCTT--------HHHHHHHH-HHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEE--EECT
T ss_pred EEEEeccCCh--------hHHHHHHH-HHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEE--EccC
Confidence 9999987553 13478888 79999999998874211100 01234566777778776 543332 2344
Q ss_pred ccCCceeEEEE
Q 019550 257 SFADTWGWVMA 267 (339)
Q Consensus 257 ~~~~~~~~~~a 267 (339)
.|.....+++|
T Consensus 219 pf~~~H~lv~~ 229 (233)
T 4df3_A 219 PFDRDHAMIYA 229 (233)
T ss_dssp TTSTTEEEEEE
T ss_pred CCCCceEEEEE
Confidence 45544555555
No 148
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.10 E-value=2.4e-10 Score=109.16 Aligned_cols=106 Identities=19% Similarity=0.191 Sum_probs=80.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++++||+||||+|.++..+++. +..+|++||+++ +++.|++.+..++. .++++++.+|+.+. ....++||+|+
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~---~~~i~~~~~d~~~~-~~~~~~~D~Iv 136 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKL---EDTITLIKGKIEEV-HLPVEKVDVII 136 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTC---TTTEEEEESCTTTS-CCSCSCEEEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCC---CCcEEEEEeeHHHh-cCCCCcEEEEE
Confidence 45679999999999999999885 567999999997 99999998865432 47899999998764 22237899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEE
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFV 219 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv 219 (339)
++..... ....-....+++. +++.|+|||+++
T Consensus 137 s~~~~~~---l~~~~~~~~~l~~-~~~~LkpgG~li 168 (340)
T 2fyt_A 137 SEWMGYF---LLFESMLDSVLYA-KNKYLAKGGSVY 168 (340)
T ss_dssp ECCCBTT---BTTTCHHHHHHHH-HHHHEEEEEEEE
T ss_pred EcCchhh---ccCHHHHHHHHHH-HHhhcCCCcEEE
Confidence 9873111 0001113467887 789999999987
No 149
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.10 E-value=2.9e-09 Score=93.27 Aligned_cols=117 Identities=18% Similarity=0.185 Sum_probs=85.7
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
+.++||++|||+|.++..+++. +..+|++||+|+.+++.+++++.... -+++++.+|+.++ +.+||+|++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~----~~~~D~v~~ 118 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFK-----GKFKVFIGDVSEF----NSRVDIVIM 118 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGT-----TSEEEEESCGGGC----CCCCSEEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC-----CCEEEEECchHHc----CCCCCEEEE
Confidence 5679999999999999999885 45689999999999999999987542 2799999998763 358999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV 244 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~ 244 (339)
|++-... ..-....+++. +.+.| ||++++... .......+.+.+.+.
T Consensus 119 ~~p~~~~----~~~~~~~~l~~-~~~~l--~~~~~~~~~------~~~~~~~~~~~l~~~ 165 (207)
T 1wy7_A 119 NPPFGSQ----RKHADRPFLLK-AFEIS--DVVYSIHLA------KPEVRRFIEKFSWEH 165 (207)
T ss_dssp CCCCSSS----STTTTHHHHHH-HHHHC--SEEEEEEEC------CHHHHHHHHHHHHHT
T ss_pred cCCCccc----cCCchHHHHHH-HHHhc--CcEEEEEeC------CcCCHHHHHHHHHHC
Confidence 9974321 11224678888 67777 777765421 223344455555554
No 150
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.09 E-value=1.5e-10 Score=104.27 Aligned_cols=105 Identities=17% Similarity=0.238 Sum_probs=81.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++.. .+++++|+++.+++.+++.+.... -++++++.+|+.+ +....++||+|+
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~-~~~~~~~fD~v~ 92 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKG----VENVRFQQGTAES-LPFPDDSFDIIT 92 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHT----CCSEEEEECBTTB-CCSCTTCEEEEE
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcC----CCCeEEEeccccc-CCCCCCcEEEEE
Confidence 457899999999999999998754 589999999999999999876542 3679999999865 233347899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.. -+ -...+++. +++.|+|||.+++..
T Consensus 93 ~~~~l~~--~~----~~~~~l~~-~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 93 CRYAAHH--FS----DVRKAVRE-VARVLKQDGRFLLVD 124 (239)
T ss_dssp EESCGGG--CS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECCchhh--cc----CHHHHHHH-HHHHcCCCcEEEEEE
Confidence 9854211 01 12578898 799999999988753
No 151
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.09 E-value=3.6e-10 Score=105.99 Aligned_cols=106 Identities=17% Similarity=0.193 Sum_probs=82.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++..+ .+|++||+++.+++.|++.+..... .++++++.+|+.+. +++||+|+
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~----~~~fD~v~ 160 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCEQVLASIDT---NRSRQVLLQGWEDF----AEPVDRIV 160 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTSCC---SSCEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCC---CCceEEEECChHHC----CCCcCEEE
Confidence 4567999999999999999998654 5999999999999999998764422 36799999998653 47899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-... ++ -....+++. +.+.|+|||.+++..
T Consensus 161 ~~~~l~~~-~~---~~~~~~l~~-~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 161 SIEAFEHF-GH---ENYDDFFKR-CFNIMPADGRMTVQS 194 (318)
T ss_dssp EESCGGGT-CG---GGHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred EeChHHhc-CH---HHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 87542110 00 123588998 799999999998865
No 152
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.09 E-value=1.7e-10 Score=108.28 Aligned_cols=106 Identities=13% Similarity=0.086 Sum_probs=83.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+|||||||+|.++..+++.. ..+|++||+++.+++.|++++..... .++++++.+|+.+. ....++||+|+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~-~~~~~~fD~V~ 190 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRI---DDHVRSRVCNMLDT-PFDKGAVTASW 190 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECCTTSC-CCCTTCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC---CCceEEEECChhcC-CCCCCCEeEEE
Confidence 456799999999999999998864 46899999999999999999875432 46899999998652 22347899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-. .+-...+++. +++.|+|||.+++..
T Consensus 191 ~~~~l~-------~~~~~~~l~~-~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 191 NNESTM-------YVDLHDLFSE-HSRFLKVGGRYVTIT 221 (312)
T ss_dssp EESCGG-------GSCHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECCchh-------hCCHHHHHHH-HHHHcCCCcEEEEEE
Confidence 865422 1125688998 899999999988754
No 153
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.09 E-value=9.2e-10 Score=108.27 Aligned_cols=115 Identities=19% Similarity=0.244 Sum_probs=86.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvI 182 (339)
.+..+|||+|||.|+.+..+++..+..+|+++|+++..++.+++++...+ -+++++.+|+.+.... ..++||+|
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g-----~~~~~~~~D~~~~~~~~~~~~fD~V 319 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG-----MKATVKQGDGRYPSQWCGEQQFDRI 319 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT-----CCCEEEECCTTCTHHHHTTCCEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC-----CCeEEEeCchhhchhhcccCCCCEE
Confidence 34578999999999999999987665799999999999999999987542 2478999998775432 23689999
Q ss_pred EecCCCCCCC----Cccc-------cC-----CcHHHHHHHHccccCCCcEEEEecCC
Q 019550 183 FGDLADPVEG----GPCY-------QL-----YTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 183 i~D~~d~~~~----~p~~-------~L-----~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
++|++-...+ .|.. .+ ...++++. +.+.|+|||+++..+.+
T Consensus 320 l~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~-a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA-IWPHLKTGGTLVYATCS 376 (429)
T ss_dssp EEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHH-HGGGEEEEEEEEEEESC
T ss_pred EEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHH-HHHhcCCCCEEEEEECC
Confidence 9998732100 0100 00 01477888 78999999999987644
No 154
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.08 E-value=1.9e-10 Score=104.81 Aligned_cols=101 Identities=14% Similarity=0.139 Sum_probs=78.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+||+||||+|.++..+++. ..+|++||+++.+++.|++.+ ++++++.+|+.++- ..++||+|+
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~fD~v~ 115 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRN---------PDAVLHHGDMRDFS--LGRRFSAVT 115 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTTCC--CSCCEEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhC---------CCCEEEECChHHCC--ccCCcCEEE
Confidence 45689999999999999999885 358999999999999999874 37899999987642 157899999
Q ss_pred ecC-CCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDL-ADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~-~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+.. .-.. -+ ..-....+++. +++.|+|||++++.
T Consensus 116 ~~~~~l~~--~~-~~~~~~~~l~~-~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 116 CMFSSIGH--LA-GQAELDAALER-FAAHVLPDGVVVVE 150 (263)
T ss_dssp ECTTGGGG--SC-HHHHHHHHHHH-HHHTEEEEEEEEEC
T ss_pred EcCchhhh--cC-CHHHHHHHHHH-HHHhcCCCcEEEEE
Confidence 875 2111 00 00012467898 79999999999986
No 155
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.08 E-value=6.2e-11 Score=107.69 Aligned_cols=80 Identities=10% Similarity=0.086 Sum_probs=64.3
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHH-HHHhcC----Cce
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA-ELEKRN----EKF 179 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~-~l~~~~----~~y 179 (339)
++.+|||||||+|.++..+++..+..+|++||+++.+++.|++++..... .++++++.+|+.+ ++.... ++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL---SDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC---TTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC---CccEEEEEcchhhhhhhhhhcccCCcc
Confidence 46799999999999998888765557999999999999999999875432 3579999999765 222222 589
Q ss_pred eEEEecCC
Q 019550 180 DVIFGDLA 187 (339)
Q Consensus 180 DvIi~D~~ 187 (339)
|+|+++++
T Consensus 142 D~i~~npp 149 (254)
T 2h00_A 142 DFCMCNPP 149 (254)
T ss_dssp SEEEECCC
T ss_pred cEEEECCC
Confidence 99999976
No 156
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.08 E-value=8.3e-11 Score=109.51 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=81.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+.+.+||+||||+|.++..+++. ..+|++||+++.+++.|++.+....... ..+++++.+|+.++ . ..++||+|+
T Consensus 81 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~v~~~~~d~~~~-~-~~~~fD~v~ 155 (299)
T 3g2m_A 81 PVSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADV-RDRCTLVQGDMSAF-A-LDKRFGTVV 155 (299)
T ss_dssp CCCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHH-HTTEEEEECBTTBC-C-CSCCEEEEE
T ss_pred CCCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhccccc-ccceEEEeCchhcC-C-cCCCcCEEE
Confidence 34569999999999999999985 3689999999999999999876431000 16899999998763 2 257899998
Q ss_pred ecCC-CCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 184 GDLA-DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 184 ~D~~-d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
+... -... .+ -....+++. +++.|+|||+|++...
T Consensus 156 ~~~~~~~~~-~~---~~~~~~l~~-~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 156 ISSGSINEL-DE---ADRRGLYAS-VREHLEPGGKFLLSLA 191 (299)
T ss_dssp ECHHHHTTS-CH---HHHHHHHHH-HHHHEEEEEEEEEEEE
T ss_pred ECCcccccC-CH---HHHHHHHHH-HHHHcCCCcEEEEEee
Confidence 6421 1110 00 012578898 7999999999998754
No 157
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.08 E-value=1e-09 Score=100.19 Aligned_cols=120 Identities=11% Similarity=0.075 Sum_probs=92.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
++..+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++..++. ..+++++.+|+.+.+.. .++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl---~~~I~v~~gD~l~~~~~-~~~~D~Iv 95 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL---TEQIDVRKGNGLAVIEK-KDAIDTIV 95 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC---TTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEecchhhccCc-cccccEEE
Confidence 455789999999999999999876677999999999999999999876643 46899999999876532 23599988
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV 244 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~ 244 (339)
+..- ... .-.+++.. ..+.|+++|.|++|.- .. ...+.+.|.+.
T Consensus 96 iagm-------Gg~-lI~~IL~~-~~~~L~~~~~lIlq~~-----~~---~~~lr~~L~~~ 139 (244)
T 3gnl_A 96 IAGM-------GGT-LIRTILEE-GAAKLAGVTKLILQPN-----IA---AWQLREWSEQN 139 (244)
T ss_dssp EEEE-------CHH-HHHHHHHH-TGGGGTTCCEEEEEES-----SC---HHHHHHHHHHH
T ss_pred EeCC-------chH-HHHHHHHH-HHHHhCCCCEEEEEcC-----CC---hHHHHHHHHHC
Confidence 7321 111 23478888 7899999999999842 12 34566777776
No 158
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.08 E-value=4.2e-10 Score=107.68 Aligned_cols=106 Identities=14% Similarity=0.166 Sum_probs=80.6
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
++++||+||||+|.++..+++. +..+|++||+++ +++.|++.+..++. .++++++.+|..+. ..+++||+|++
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l---~~~v~~~~~d~~~~--~~~~~~D~Ivs 122 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNL---TDRIVVIPGKVEEV--SLPEQVDIIIS 122 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC---TTTEEEEESCTTTC--CCSSCEEEEEE
T ss_pred CcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCC---CCcEEEEEcchhhC--CCCCceeEEEE
Confidence 5679999999999999999885 667999999997 78999988765432 47899999998764 22468999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...... .. . ...+.+.. +++.|+|||+++++.
T Consensus 123 ~~~~~~~-~~--~-~~~~~l~~-~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 123 EPMGYML-FN--E-RMLESYLH-AKKYLKPSGNMFPTI 155 (348)
T ss_dssp CCCBTTB-TT--T-SHHHHHHH-GGGGEEEEEEEESCE
T ss_pred eCchhcC-Ch--H-HHHHHHHH-HHhhcCCCeEEEEec
Confidence 8652210 00 0 12467777 789999999998653
No 159
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.08 E-value=1.5e-09 Score=93.04 Aligned_cols=120 Identities=18% Similarity=0.228 Sum_probs=86.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+||+||||+|..+..+++. ..+++++|+++.+++.+++.+ ++++++.+|+.+. ....++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~~D~i~ 112 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDF---------PEARWVVGDLSVD-QISETDFDLIV 112 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTTS-CCCCCCEEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhC---------CCCcEEEcccccC-CCCCCceeEEE
Confidence 46789999999999999999885 368999999999999999874 4588999998653 22246899999
Q ss_pred ecCC-CCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH
Q 019550 184 GDLA-DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV 244 (339)
Q Consensus 184 ~D~~-d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~ 244 (339)
++.. -... .+ . ....+++. +.+.|+|||++++..... .......+.+.+++.
T Consensus 113 ~~~~~~~~~-~~-~--~~~~~l~~-~~~~l~~~G~l~~~~~~~----~~~~~~~~~~~l~~~ 165 (195)
T 3cgg_A 113 SAGNVMGFL-AE-D--GREPALAN-IHRALGADGRAVIGFGAG----RGWVFGDFLEVAERV 165 (195)
T ss_dssp ECCCCGGGS-CH-H--HHHHHHHH-HHHHEEEEEEEEEEEETT----SSCCHHHHHHHHHHH
T ss_pred ECCcHHhhc-Ch-H--HHHHHHHH-HHHHhCCCCEEEEEeCCC----CCcCHHHHHHHHHHc
Confidence 9732 1110 00 0 12578888 799999999998865322 111344556666665
No 160
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.07 E-value=1.3e-10 Score=103.76 Aligned_cols=107 Identities=19% Similarity=0.263 Sum_probs=80.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCC------CEEEEEEcCHHHHHHHHHhhhhhcc-ccCCCCeEEEEccHHHHHHhcC
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSL------EKVVMCDIDQEVVDFCRRFLTVNQE-AFCSKKLNLVVNDAKAELEKRN 176 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~------~~v~~VEid~~vi~~ar~~f~~~~~-~~~~~rv~v~~~D~~~~l~~~~ 176 (339)
.+..+||+||||+|..+..+++..+. .+|+++|+++.+++.|++++..... .+..++++++.+|+.+.+.. .
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 161 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-N 161 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-G
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-C
Confidence 34579999999999999988875442 5899999999999999998764310 00126899999999763322 3
Q ss_pred CceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCC
Q 019550 177 EKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 177 ~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
++||+|+++..-+. + .+. +.+.|+|||++++..++
T Consensus 162 ~~fD~I~~~~~~~~-------~-----~~~-~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 162 APYNAIHVGAAAPD-------T-----PTE-LINQLASGGRLIVPVGP 196 (227)
T ss_dssp CSEEEEEECSCBSS-------C-----CHH-HHHTEEEEEEEEEEESC
T ss_pred CCccEEEECCchHH-------H-----HHH-HHHHhcCCCEEEEEEec
Confidence 67999999876332 1 245 67899999999998754
No 161
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.07 E-value=1.7e-10 Score=100.89 Aligned_cols=119 Identities=16% Similarity=0.064 Sum_probs=83.1
Q ss_pred hHHHHHhhhhcccCCCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHH
Q 019550 90 IYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAK 169 (339)
Q Consensus 90 ~Y~e~l~~~~l~~~~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~ 169 (339)
.|.+++..+.. .+++.+||+||||+|.....++... ..++++||+++.+++.|++.+... .++++++.+|+.
T Consensus 10 ~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~ 81 (209)
T 2p8j_A 10 QLYRFLKYCNE--SNLDKTVLDCGAGGDLPPLSIFVED-GYKTYGIEISDLQLKKAENFSREN-----NFKLNISKGDIR 81 (209)
T ss_dssp HHHHHHHHHHH--SSSCSEEEEESCCSSSCTHHHHHHT-TCEEEEEECCHHHHHHHHHHHHHH-----TCCCCEEECCTT
T ss_pred hHHHHHHHHhc--cCCCCEEEEECCCCCHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEECchh
Confidence 45555443322 2456899999999999744444434 468999999999999999987654 367899999986
Q ss_pred HHHHhcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 170 AELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 170 ~~l~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+. ....++||+|++...-.. -+ .-....+++. +++.|+|||++++..
T Consensus 82 ~~-~~~~~~fD~v~~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 82 KL-PFKDESMSFVYSYGTIFH--MR--KNDVKEAIDE-IKRVLKPGGLACINF 128 (209)
T ss_dssp SC-CSCTTCEEEEEECSCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred hC-CCCCCceeEEEEcChHHh--CC--HHHHHHHHHH-HHHHcCCCcEEEEEE
Confidence 52 223468999998643111 00 0013578888 799999999998764
No 162
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.07 E-value=1.2e-10 Score=102.04 Aligned_cols=110 Identities=15% Similarity=0.169 Sum_probs=81.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|.++..+++.. ..+++++|+++.+++.+++.+.. .++++++.+|+.+. ....++||+|+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~~-~~~~~~fD~v~ 112 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGG-FPNVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRKL-DFPSASFDVVL 112 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTT-CCCEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTSC-CSCSSCEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcC-CCcEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhcC-CCCCCcccEEE
Confidence 456799999999999999998853 34899999999999999998653 36899999998663 22346899999
Q ss_pred ecCCC---------CCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLAD---------PVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d---------~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+..+- ++.......-....+++. +.+.|+|||++++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 113 EKGTLDALLAGERDPWTVSSEGVHTVDQVLSE-VSRVLVPGGRFISMT 159 (215)
T ss_dssp EESHHHHHTTTCSCTTSCCHHHHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECcchhhhccccccccccccchhHHHHHHHHH-HHHhCcCCCEEEEEe
Confidence 86531 110000000012578898 799999999998865
No 163
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.07 E-value=1.7e-10 Score=107.02 Aligned_cols=107 Identities=13% Similarity=0.134 Sum_probs=83.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++..+ .+|+++|+++.+++.|++.+..... .++++++.+|+.+. ....++||+|+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~-~~~~~~fD~v~ 155 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQAGL---ADNITVKYGSFLEI-PCEDNSYDFIW 155 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHHTC---TTTEEEEECCTTSC-SSCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCC---CcceEEEEcCcccC-CCCCCCEeEEE
Confidence 4567999999999999999998644 5899999999999999998765432 46899999998652 22347899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.. -+ ....+++. +++.|+|||.+++..
T Consensus 156 ~~~~l~~--~~----~~~~~l~~-~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 156 SQDAFLH--SP----DKLKVFQE-CARVLKPRGVMAITD 187 (297)
T ss_dssp EESCGGG--CS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ecchhhh--cC----CHHHHHHH-HHHHcCCCeEEEEEE
Confidence 8754211 01 13588999 899999999988764
No 164
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.07 E-value=2.6e-10 Score=102.95 Aligned_cols=106 Identities=17% Similarity=0.234 Sum_probs=80.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+||+||||+|..+..+++. ..+|++||+++.+++.|++.+... ..+++++.+|+.+.. ..++||+|+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~--~~~~fD~v~ 110 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKER-----NLKIEFLQGDVLEIA--FKNEFDAVT 110 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEESCGGGCC--CCSCEEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhc-----CCceEEEECChhhcc--cCCCccEEE
Confidence 45679999999999999999885 368999999999999999987654 347999999987632 246899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+....... .+ .-....+++. +++.|+|||++++..
T Consensus 111 ~~~~~~~~-~~--~~~~~~~l~~-~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 111 MFFSTIMY-FD--EEDLRKLFSK-VAEALKPGGVFITDF 145 (252)
T ss_dssp ECSSGGGG-SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcCCchhc-CC--HHHHHHHHHH-HHHHcCCCeEEEEec
Confidence 75321110 00 0012478888 799999999998864
No 165
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.07 E-value=2.2e-10 Score=108.10 Aligned_cols=102 Identities=18% Similarity=0.239 Sum_probs=80.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.++.+||+||||+|.++..+++..+ ..+|++||+++++++.|++++.... -++++++.+|+.+.+. ..++||+|
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g----~~~v~~~~~d~~~~~~-~~~~fD~I 148 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG----IENVIFVCGDGYYGVP-EFSPYDVI 148 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCG-GGCCEEEE
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCeEEEECChhhccc-cCCCeEEE
Confidence 4567999999999999999988654 3679999999999999999986543 2469999999987543 23689999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
+++..-+. +. +. +.+.|+|||+++++.+
T Consensus 149 v~~~~~~~-------~~-----~~-~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 149 FVTVGVDE-------VP-----ET-WFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EECSBBSC-------CC-----HH-HHHHEEEEEEEEEEBC
T ss_pred EEcCCHHH-------HH-----HH-HHHhcCCCcEEEEEEC
Confidence 99976332 11 45 5778999999999864
No 166
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.07 E-value=1.6e-10 Score=111.94 Aligned_cols=111 Identities=14% Similarity=0.215 Sum_probs=85.1
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhcc----ccCCCCeEEEEccHHHHH-----H
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQE----AFCSKKLNLVVNDAKAEL-----E 173 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~----~~~~~rv~v~~~D~~~~l-----~ 173 (339)
.++.+||+||||+|..+..+++.. +..+|++||+++.+++.|++++..... .+..++++++.+|+.+.. .
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 356799999999999999998764 467999999999999999998754311 123479999999987642 1
Q ss_pred hcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 174 KRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 174 ~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
...++||+|+++..-.. .+ -...+++. +++.|+|||.+++.
T Consensus 162 ~~~~~fD~V~~~~~l~~--~~----d~~~~l~~-~~r~LkpgG~l~i~ 202 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNL--ST----NKLALFKE-IHRVLRDGGELYFS 202 (383)
T ss_dssp CCTTCEEEEEEESCGGG--CS----CHHHHHHH-HHHHEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhc--CC----CHHHHHHH-HHHHcCCCCEEEEE
Confidence 22468999999875322 11 13588998 89999999999875
No 167
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.06 E-value=2e-09 Score=94.00 Aligned_cols=96 Identities=19% Similarity=0.209 Sum_probs=73.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||++|||+|.++..+++. +..+|++||+|+.+++.|++++. +++++.+|+.++ +++||+|+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~~----~~~~D~v~ 115 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSEI----SGKYDTWI 115 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGGC----CCCEEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHHC----CCCeeEEE
Confidence 45679999999999999999885 56689999999999999999853 689999998763 37899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
+|++-... . .-....+++. +.+.| |+++++
T Consensus 116 ~~~p~~~~--~--~~~~~~~l~~-~~~~~--g~~~~~ 145 (200)
T 1ne2_A 116 MNPPFGSV--V--KHSDRAFIDK-AFETS--MWIYSI 145 (200)
T ss_dssp ECCCC-----------CHHHHHH-HHHHE--EEEEEE
T ss_pred ECCCchhc--c--CchhHHHHHH-HHHhc--CcEEEE
Confidence 99874321 1 1124578888 67777 555544
No 168
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.06 E-value=4.9e-10 Score=110.94 Aligned_cols=135 Identities=16% Similarity=0.144 Sum_probs=93.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCC-CEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcC-CceeE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSL-EKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRN-EKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~-~~yDv 181 (339)
.+..+|||+|||.|+.+..+++..+. .+|+++|+++..++.+++++...+ -++++++.+|+.++..... ++||+
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG----IKIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT----CCSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC----CCcEEEEEcChhhcchhhccCCCCE
Confidence 34578999999999999999986554 799999999999999999987543 3579999999876532222 67999
Q ss_pred EEecCCCCCCC----Ccc-------cc---C--CcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHC
Q 019550 182 IFGDLADPVEG----GPC-------YQ---L--YTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVF 245 (339)
Q Consensus 182 Ii~D~~d~~~~----~p~-------~~---L--~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F 245 (339)
|++|++-...+ .|. .. + ...++++. +.+.|+|||.++..+.+. . .......+..+.+.+
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~-a~~~LkpGG~lvy~tcs~---~-~~ene~~v~~~l~~~ 408 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLES-AARLVKPGGRLLYTTCSI---F-KEENEKNIRWFLNVH 408 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHH-HHTTEEEEEEEEEEESCC---C-GGGTHHHHHHHHHHC
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeCCC---C-hhhHHHHHHHHHHhC
Confidence 99998732100 000 00 0 01578888 789999999998765443 1 222334444444444
Q ss_pred Cc
Q 019550 246 KH 247 (339)
Q Consensus 246 ~~ 247 (339)
+.
T Consensus 409 ~~ 410 (450)
T 2yxl_A 409 PE 410 (450)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 169
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.06 E-value=4.7e-10 Score=98.45 Aligned_cols=140 Identities=14% Similarity=0.146 Sum_probs=90.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH-----HHh-cC-
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE-----LEK-RN- 176 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~-----l~~-~~- 176 (339)
.+..+|||||||+|+.+..+++. ..+|++||+++.. ..++++++.+|+.+. +.. ..
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~---------------~~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME---------------EIAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC---------------CCTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred CCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc---------------cCCCeEEEEccccCHHHHHHHHHHhhc
Confidence 45689999999999999999885 5799999999741 136899999997542 111 11
Q ss_pred ---CceeEEEecCCCCCCCCcc--ccC----CcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCc
Q 019550 177 ---EKFDVIFGDLADPVEGGPC--YQL----YTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKH 247 (339)
Q Consensus 177 ---~~yDvIi~D~~d~~~~~p~--~~L----~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~ 247 (339)
++||+|++|+..... +.. ... .....++. +.+.|+|||.|++.. +. ......+.+.++..|..
T Consensus 87 ~~~~~~D~Vlsd~~~~~~-g~~~~d~~~~~~l~~~~l~~-a~~~LkpGG~lv~k~-----~~-~~~~~~~~~~l~~~F~~ 158 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVS-GIPSRDHAVSYQIGQRVMEI-AVRYLRNGGNVLLKQ-----FQ-GDMTNDFIAIWRKNFSS 158 (191)
T ss_dssp HTCSSEEEEEECCCCCCC-SCHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEE-----EC-STHHHHHHHHHGGGEEE
T ss_pred ccCCcceEEecCCCcCCC-CCcccCHHHHHHHHHHHHHH-HHHHccCCCEEEEEE-----cC-CCCHHHHHHHHHHhcCE
Confidence 489999999863321 110 000 01345666 688999999999864 22 22356778888888988
Q ss_pred eEEEEEeecccCC-ceeEEEEec
Q 019550 248 VVAYTAHVPSFAD-TWGWVMASD 269 (339)
Q Consensus 248 v~~~~~~iP~~~~-~~~~~~as~ 269 (339)
|.... +..+-.. .-.|++|.+
T Consensus 159 v~~~k-P~asR~~s~E~y~v~~~ 180 (191)
T 3dou_A 159 YKISK-PPASRGSSSEIYIMFFG 180 (191)
T ss_dssp EEEEC-C------CCEEEEEEEE
T ss_pred EEEEC-CCCccCCCceEEEEEee
Confidence 77643 1111112 234677764
No 170
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.06 E-value=1.4e-10 Score=103.36 Aligned_cols=107 Identities=15% Similarity=0.145 Sum_probs=80.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-----CCCEEEEEEcCHHHHHHHHHhhhhhcc-ccCCCCeEEEEccHHHHHH---h
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-----SLEKVVMCDIDQEVVDFCRRFLTVNQE-AFCSKKLNLVVNDAKAELE---K 174 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-----~~~~v~~VEid~~vi~~ar~~f~~~~~-~~~~~rv~v~~~D~~~~l~---~ 174 (339)
.+..+||+||||+|..+..+++.. +..+|+++|+++.+++.|++++..... ....++++++.+|+.+... .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 346799999999999999998864 346999999999999999999865420 0113689999999987431 1
Q ss_pred cCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 175 RNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 175 ~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
..++||+|+++...+. +++. +.+.|+|||++++...
T Consensus 159 ~~~~fD~I~~~~~~~~------------~~~~-~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASASE------------LPEI-LVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBSS------------CCHH-HHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHH------------HHHH-HHHhcCCCcEEEEEEc
Confidence 2367999999876331 1255 6788999999998753
No 171
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.06 E-value=3.7e-10 Score=99.57 Aligned_cols=102 Identities=23% Similarity=0.245 Sum_probs=79.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.+..+||+||||+|..+..+++.. +..+|+++|+++.+++.+++++.... -++++++.+|+...+. ..++||+|
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~-~~~~fD~v 150 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG----YDNVIVIVGDGTLGYE-PLAPYDRI 150 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEESCGGGCCG-GGCCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEECCcccCCC-CCCCeeEE
Confidence 456799999999999999998865 33799999999999999999986542 2569999999855433 23679999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
+++..-+. +. +. +.+.|+|||.+++...
T Consensus 151 ~~~~~~~~-------~~-----~~-~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 151 YTTAAGPK-------IP-----EP-LIRQLKDGGKLLMPVG 178 (215)
T ss_dssp EESSBBSS-------CC-----HH-HHHTEEEEEEEEEEES
T ss_pred EECCchHH-------HH-----HH-HHHHcCCCcEEEEEEC
Confidence 99875332 11 35 6789999999998764
No 172
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.05 E-value=2.4e-10 Score=102.07 Aligned_cols=106 Identities=17% Similarity=0.194 Sum_probs=81.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+||+||||+|..+..+++. ..+++++|+++.+++.|++.+... ..+++++.+|+.+.. ..++||+|+
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~~~~fD~v~ 106 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQ-----GLKPRLACQDISNLN--INRKFDLIT 106 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHT-----TCCCEEECCCGGGCC--CSCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhc-----CCCeEEEecccccCC--ccCCceEEE
Confidence 36789999999999999999885 368999999999999999987653 237999999987642 237899999
Q ss_pred ecC-CCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDL-ADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~-~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+.. .-.. .+. .-....+++. +++.|+|||++++..
T Consensus 107 ~~~~~l~~--~~~-~~~~~~~l~~-~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 107 CCLDSTNY--IID-SDDLKKYFKA-VSNHLKEGGVFIFDI 142 (246)
T ss_dssp ECTTGGGG--CCS-HHHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred EcCccccc--cCC-HHHHHHHHHH-HHHhcCCCcEEEEEe
Confidence 965 3111 000 0013578898 799999999999865
No 173
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.05 E-value=3.4e-10 Score=102.45 Aligned_cols=104 Identities=15% Similarity=0.141 Sum_probs=81.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++. ..+|+++|+++.+++.+++.+.. ..++++++.+|+.+. ....++||+|+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~d~~~~-~~~~~~fD~v~ 109 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAG-----VDRKVQVVQADARAI-PLPDESVHGVI 109 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTT-----SCTTEEEEESCTTSC-CSCTTCEEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhc-----cCCceEEEEcccccC-CCCCCCeeEEE
Confidence 45679999999999999999885 46899999999999999998721 247899999998643 22346899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.. .+ -...+++. +++.|+|||.+++..
T Consensus 110 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 110 VVHLWHL--VP----DWPKVLAE-AIRVLKPGGALLEGW 141 (263)
T ss_dssp EESCGGG--CT----THHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECCchhh--cC----CHHHHHHH-HHHHCCCCcEEEEEe
Confidence 9764222 11 13578998 799999999988763
No 174
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.05 E-value=3.8e-10 Score=107.16 Aligned_cols=106 Identities=19% Similarity=0.279 Sum_probs=80.1
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
++++||+||||+|.++..+++. +..+|++||++ .+++.|++.+..+.. .++++++.+|+.+. ....++||+|++
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~---~~~i~~~~~d~~~~-~~~~~~~D~Ivs 111 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGF---SDKITLLRGKLEDV-HLPFPKVDIIIS 111 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTC---TTTEEEEESCTTTS-CCSSSCEEEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCC---CCCEEEEECchhhc-cCCCCcccEEEE
Confidence 5679999999999999998885 66799999999 489999998865432 46899999998764 222378999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
+...... . ..-....++.. +++.|+|||+++.
T Consensus 112 ~~~~~~l--~-~~~~~~~~l~~-~~~~LkpgG~li~ 143 (328)
T 1g6q_1 112 EWMGYFL--L-YESMMDTVLYA-RDHYLVEGGLIFP 143 (328)
T ss_dssp CCCBTTB--S-TTCCHHHHHHH-HHHHEEEEEEEES
T ss_pred eCchhhc--c-cHHHHHHHHHH-HHhhcCCCeEEEE
Confidence 8653210 0 11123467787 7899999999974
No 175
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.05 E-value=2e-10 Score=97.47 Aligned_cols=96 Identities=15% Similarity=0.104 Sum_probs=77.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|..+..+++.. .+++++|+++.+++.+++. .++++++.+| +....++||+|+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~---------~~~v~~~~~d----~~~~~~~~D~v~ 80 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK---------FDSVITLSDP----KEIPDNSVDFIL 80 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH---------CTTSEEESSG----GGSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh---------CCCcEEEeCC----CCCCCCceEEEE
Confidence 456789999999999999999854 3999999999999999987 2689999999 333457899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-.. .+ -...+++. +++.|+|||.+++.
T Consensus 81 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 81 FANSFHD--MD----DKQHVISE-VKRILKDDGRVIII 111 (170)
T ss_dssp EESCSTT--CS----CHHHHHHH-HHHHEEEEEEEEEE
T ss_pred Eccchhc--cc----CHHHHHHH-HHHhcCCCCEEEEE
Confidence 8765322 11 13588898 79999999998875
No 176
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.05 E-value=2.1e-10 Score=102.57 Aligned_cols=104 Identities=17% Similarity=0.214 Sum_probs=80.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+...+||+||||+|..+..+++. .+++++|+++.+++.|++.+... ..+++++.+|+.+.- ..++||+|+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~~~~fD~v~ 101 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET-----NRHVDFWVQDMRELE--LPEPVDAIT 101 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCGGGCC--CSSCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc-----CCceEEEEcChhhcC--CCCCcCEEE
Confidence 34589999999999999988875 68999999999999999987654 367999999987642 237899999
Q ss_pred ecC-C-CCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDL-A-DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~-~-d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+.. . .... .+ -....+++. +++.|+|||++++..
T Consensus 102 ~~~~~~~~~~-~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 102 ILCDSLNYLQ-TE---ADVKQTFDS-AARLLTDGGKLLFDV 137 (243)
T ss_dssp ECTTGGGGCC-SH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeCCchhhcC-CH---HHHHHHHHH-HHHhcCCCeEEEEEc
Confidence 864 1 1110 00 012467888 799999999999865
No 177
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.05 E-value=4.6e-10 Score=97.89 Aligned_cols=100 Identities=13% Similarity=0.192 Sum_probs=78.3
Q ss_pred eEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecCC
Q 019550 108 TVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLA 187 (339)
Q Consensus 108 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~ 187 (339)
+||+||||+|..+..+++. ..+++++|+++.+++.|++.+... ..+++++.+|+.+. ....++||+|++...
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~ 103 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEK-----GVKITTVQSNLADF-DIVADAWEGIVSIFC 103 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHH-----TCCEEEECCBTTTB-SCCTTTCSEEEEECC
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcChhhc-CCCcCCccEEEEEhh
Confidence 9999999999999998885 359999999999999999987654 24799999998654 223468999998532
Q ss_pred CCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 188 DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 188 d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
.. .+ -....+++. +++.|+|||.+++..
T Consensus 104 -~~--~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 104 -HL--PS---SLRQQLYPK-VYQGLKPGGVFILEG 131 (202)
T ss_dssp -CC--CH---HHHHHHHHH-HHTTCCSSEEEEEEE
T ss_pred -cC--CH---HHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 11 10 113578888 799999999998764
No 178
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.05 E-value=4e-10 Score=100.72 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=80.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++. +..++++||+++.+++.+++.+. ..+++++.+|+.+. ....++||+|+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~-~~~~~~fD~v~ 112 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGP-------DTGITYERADLDKL-HLPQDSFDLAY 112 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSC-------SSSEEEEECCGGGC-CCCTTCEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcc-------cCCceEEEcChhhc-cCCCCCceEEE
Confidence 35679999999999999999885 44599999999999999998753 24799999998763 22357899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.. .+ -...+++. +++.|+|||.+++..
T Consensus 113 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 113 SSLALHY--VE----DVARLFRT-VHQALSPGGHFVFST 144 (243)
T ss_dssp EESCGGG--CS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Eeccccc--cc----hHHHHHHH-HHHhcCcCcEEEEEe
Confidence 8764211 01 13578898 799999999998864
No 179
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.05 E-value=3e-10 Score=102.42 Aligned_cols=106 Identities=11% Similarity=0.151 Sum_probs=81.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|.++..+++.. ..+|++||+++.+++.+++.+... ++++++.+|+.+. ....++||+|+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~-~~~~~~fD~v~ 163 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM------PVGKFILASMETA-TLPPNTYDLIV 163 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS------SEEEEEESCGGGC-CCCSSCEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC------CceEEEEccHHHC-CCCCCCeEEEE
Confidence 357899999999999999888753 568999999999999999986532 6799999998663 22346899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.. -+ .-....+++. +++.|+|||++++..
T Consensus 164 ~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 164 IQWTAIY--LT--DADFVKFFKH-CQQALTPNGYIFFKE 197 (254)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Ecchhhh--CC--HHHHHHHHHH-HHHhcCCCeEEEEEe
Confidence 8754211 00 0013578888 799999999988754
No 180
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.04 E-value=9e-10 Score=109.99 Aligned_cols=116 Identities=15% Similarity=0.145 Sum_probs=87.6
Q ss_pred CCCeEEEEecchhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
...+|||+|||.|+.+..+++..+ ..+|+++|+++..++.+++++...+ -++++++.+|+.++.....++||+|+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g----~~nv~~~~~D~~~~~~~~~~~fD~Il 192 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG----ISNVALTHFDGRVFGAAVPEMFDAIL 192 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT----CCSEEEECCCSTTHHHHSTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEeCCHHHhhhhccccCCEEE
Confidence 467899999999999999988643 4789999999999999999987553 25799999999887543457899999
Q ss_pred ecCCCCCC----CCcc-ccCC-----------cHHHHHHHHccccCCCcEEEEecCCC
Q 019550 184 GDLADPVE----GGPC-YQLY-----------TKSFYERILKPKLNDNGIFVTQAGPA 225 (339)
Q Consensus 184 ~D~~d~~~----~~p~-~~L~-----------t~ef~~~~~~~~L~~gGilv~~~~~~ 225 (339)
+|++-... ..|. .... ..++++. +.+.|+|||+|+..+.+.
T Consensus 193 ~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~-a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 193 LDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDS-AFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp EECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEESCC
T ss_pred ECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHH-HHHhcCCCCEEEEecccC
Confidence 99873210 0010 0011 2467887 789999999999876543
No 181
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.04 E-value=9.9e-11 Score=111.73 Aligned_cols=127 Identities=17% Similarity=0.220 Sum_probs=93.0
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
.+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++..+ ..+++++.+|+.++. .++||+|++
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~-----~~~~~~~~~d~~~~~---~~~fD~Iv~ 267 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN-----GVEGEVFASNVFSEV---KGRFDMIIS 267 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT-----TCCCEEEECSTTTTC---CSCEEEEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh-----CCCCEEEEccccccc---cCCeeEEEE
Confidence 356899999999999999998766679999999999999999998764 234678999987643 578999999
Q ss_pred cCCCCCCCCcc-ccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEE
Q 019550 185 DLADPVEGGPC-YQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAY 251 (339)
Q Consensus 185 D~~d~~~~~p~-~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~ 251 (339)
+++-.. +.. ..-....+++. +++.|+|||.+++..... .. ....+...|..+...
T Consensus 268 ~~~~~~--g~~~~~~~~~~~l~~-~~~~LkpgG~l~i~~~~~---~~------~~~~l~~~f~~~~~~ 323 (343)
T 2pjd_A 268 NPPFHD--GMQTSLDAAQTLIRG-AVRHLNSGGELRIVANAF---LP------YPDVLDETFGFHEVI 323 (343)
T ss_dssp CCCCCS--SSHHHHHHHHHHHHH-HGGGEEEEEEEEEEEETT---SS------HHHHHHHHHSCCEEE
T ss_pred CCCccc--CccCCHHHHHHHHHH-HHHhCCCCcEEEEEEcCC---CC------cHHHHHHhcCceEEE
Confidence 986432 110 00113578998 899999999988754221 11 124556667766543
No 182
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.04 E-value=4e-10 Score=104.12 Aligned_cols=115 Identities=10% Similarity=0.053 Sum_probs=81.3
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHH--hcCCceeEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELE--KRNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~--~~~~~yDvI 182 (339)
++.+||+||||+|..+..+++. + .+|++||+++.+++.|++...........+++.+..+|+.+.-. ...++||+|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE-G-FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 5689999999999999999985 3 49999999999999999876322111113578999999877542 135789999
Q ss_pred Eec--CCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 183 FGD--LADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 183 i~D--~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
++. ............-....+++. +++.|+|||++++..
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKN-IASMVRPGGLLVIDH 175 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred EEcChHHhhcCccccCHHHHHHHHHH-HHHHcCCCeEEEEEe
Confidence 995 221110000000013578998 899999999999864
No 183
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.04 E-value=1.4e-10 Score=106.97 Aligned_cols=112 Identities=14% Similarity=0.133 Sum_probs=83.1
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+||+||||+|..+..+++. +..++++||+++.+++.|++.+..... ..+++++.+|+.+.-....++||+|+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~fD~v~ 138 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKR---RFKVFFRAQDSYGRHMDLGKEFDVIS 138 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCC---SSEEEEEESCTTTSCCCCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCC---CccEEEEECCccccccCCCCCcCEEE
Confidence 46789999999999999888875 556999999999999999998765421 35799999998654111356899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-...... .-....+++. +++.|+|||.+++..
T Consensus 139 ~~~~l~~~~~~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 139 SQFSFHYAFST--SESLDIAQRN-IARHLRPGGYFIMTV 174 (298)
T ss_dssp EESCGGGGGSS--HHHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred ECchhhhhcCC--HHHHHHHHHH-HHHhcCCCCEEEEEE
Confidence 87542110000 0113578898 799999999999874
No 184
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.04 E-value=5e-10 Score=99.35 Aligned_cols=112 Identities=14% Similarity=0.101 Sum_probs=82.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhcc-ccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~-~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
++..+||+||||+|.++..+++. ..+|+++|+++.+++.+++.+..... .....+++++.+|+.+. ....++||+|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v 105 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-SFHDSSFDFA 105 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-CSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc-CCCCCceeEE
Confidence 45789999999999999999985 46899999999999999998764321 11134789999998653 2235789999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
++...-.....+ -....+++. +++.|+|||.+++..
T Consensus 106 ~~~~~l~~~~~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 106 VMQAFLTSVPDP---KERSRIIKE-VFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEESCGGGCCCH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEcchhhcCCCH---HHHHHHHHH-HHHHcCCCeEEEEEE
Confidence 997542110000 011268998 799999999988764
No 185
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.04 E-value=4e-10 Score=98.22 Aligned_cols=125 Identities=17% Similarity=0.188 Sum_probs=83.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCC--CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHH---------
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKS--LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAEL--------- 172 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~--~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l--------- 172 (339)
.+..+|||||||+|..+..+++..+ ..+|++||+++.. ..++++++.+|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------------~~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------------PIPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------------CCTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------------CCCCceEEEccccchhhhhhccccc
Confidence 3457899999999999999998765 5799999999931 1256888888876531
Q ss_pred -------------H--hcCCceeEEEecCCCCCCCCcc-ccCC-----cHHHHHHHHccccCCCcEEEEecCCCCccCch
Q 019550 173 -------------E--KRNEKFDVIFGDLADPVEGGPC-YQLY-----TKSFYERILKPKLNDNGIFVTQAGPAGIFTHK 231 (339)
Q Consensus 173 -------------~--~~~~~yDvIi~D~~d~~~~~p~-~~L~-----t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~ 231 (339)
. -..++||+|++|..-... +.. .... ...+++. +.+.|+|||.+++.... .
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~-g~~~~d~~~~~~~~~~~l~~-~~~~LkpgG~lv~~~~~------~ 157 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCI-GNKIDDHLNSCELTLSITHF-MEQYINIGGTYIVKMYL------G 157 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCC-SCHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEEEC------S
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCC-CCcccCHHHHHHHHHHHHHH-HHHHccCCCEEEEEEeC------C
Confidence 0 123689999999753321 110 0000 1236777 78999999999886421 1
Q ss_pred hhHHHHHHHHHhHCCceEEE
Q 019550 232 EVFSSIYNTIKQVFKHVVAY 251 (339)
Q Consensus 232 ~~~~~i~~~l~~~F~~v~~~ 251 (339)
.....+...++..|..+..+
T Consensus 158 ~~~~~l~~~l~~~f~~v~~~ 177 (201)
T 2plw_A 158 SQTNNLKTYLKGMFQLVHTT 177 (201)
T ss_dssp TTHHHHHHHHHTTEEEEEEC
T ss_pred CCHHHHHHHHHHHHheEEEE
Confidence 23456677777777766543
No 186
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.03 E-value=1.4e-09 Score=95.58 Aligned_cols=104 Identities=13% Similarity=0.144 Sum_probs=75.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+.+.+|||||||.|.++..++...|..+++++|+|+.+++++++++...+. ..++++ .|.... ..+++||+|+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~---~~~v~~--~d~~~~--~~~~~~DvVL 120 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT---TIKYRF--LNKESD--VYKGTYDVVF 120 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC---SSEEEE--ECCHHH--HTTSEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC---CccEEE--eccccc--CCCCCcChhh
Confidence 558899999999999999998877778999999999999999999876532 124555 666543 3467899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
.-..-+.-... ....+ . +.++|+|||+++..
T Consensus 121 a~k~LHlL~~~-----~~al~-~-v~~~L~pggvfISf 151 (200)
T 3fzg_A 121 LLKMLPVLKQQ-----DVNIL-D-FLQLFHTQNFVISF 151 (200)
T ss_dssp EETCHHHHHHT-----TCCHH-H-HHHTCEEEEEEEEE
T ss_pred HhhHHHhhhhh-----HHHHH-H-HHHHhCCCCEEEEe
Confidence 87652110000 00223 4 57899999998853
No 187
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.03 E-value=4.9e-10 Score=100.79 Aligned_cols=104 Identities=11% Similarity=0.071 Sum_probs=79.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc----CCce
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR----NEKF 179 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~----~~~y 179 (339)
.+..+||+||||+|..+..+++..+ +|++||+++.+++.|++.+. ..+++++.+|+.+.-... ...|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT-------AANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC-------CTTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc-------ccCceEEECcccccccccccccccCc
Confidence 3457899999999999999998653 89999999999999999862 358999999987643221 1349
Q ss_pred eEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 180 DVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
|+|++...-.. .+. -....+++. +++.|+|||.+++.
T Consensus 126 d~v~~~~~~~~--~~~--~~~~~~l~~-~~~~LkpgG~l~i~ 162 (245)
T 3ggd_A 126 ANIYMRTGFHH--IPV--EKRELLGQS-LRILLGKQGAMYLI 162 (245)
T ss_dssp CEEEEESSSTT--SCG--GGHHHHHHH-HHHHHTTTCEEEEE
T ss_pred cEEEEcchhhc--CCH--HHHHHHHHH-HHHHcCCCCEEEEE
Confidence 99999876332 110 013588998 79999999986654
No 188
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.03 E-value=4.6e-10 Score=100.40 Aligned_cols=102 Identities=17% Similarity=0.151 Sum_probs=81.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+||+||||+|..+..+++. ..+|++||+++.+++.+++.. ..++++++.+|+.+. ....++||+|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~~~d~~~~-~~~~~~fD~v~ 121 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERG-------EGPDLSFIKGDLSSL-PFENEQFEAIM 121 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTT-------CBTTEEEEECBTTBC-SSCTTCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhc-------ccCCceEEEcchhcC-CCCCCCccEEE
Confidence 45779999999999999999985 468999999999999999874 147899999998753 22357899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.. .+ -...+++. +++.|+|||++++..
T Consensus 122 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 122 AINSLEW--TE----EPLRALNE-IKRVLKSDGYACIAI 153 (242)
T ss_dssp EESCTTS--SS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcChHhh--cc----CHHHHHHH-HHHHhCCCeEEEEEE
Confidence 8765322 11 12478998 799999999998865
No 189
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.02 E-value=5.2e-10 Score=102.94 Aligned_cols=99 Identities=18% Similarity=0.244 Sum_probs=78.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++ +..+|+++|+++.+++.+++.+ ++++++.+|+.++ . ..++||+|+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~-~~~~fD~v~ 122 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY---------PHLHFDVADARNF-R-VDKPLDAVF 122 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTC-C-CSSCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhC-C-cCCCcCEEE
Confidence 3567999999999999999988 4579999999999999999874 5688899998663 2 247899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-... + -...+++. +++.|+|||.+++..
T Consensus 123 ~~~~l~~~--~----d~~~~l~~-~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 123 SNAMLHWV--K----EPEAAIAS-IHQALKSGGRFVAEF 154 (279)
T ss_dssp EESCGGGC--S----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcchhhhC--c----CHHHHHHH-HHHhcCCCcEEEEEe
Confidence 87642210 1 13478898 799999999998865
No 190
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.02 E-value=2.8e-10 Score=102.36 Aligned_cols=102 Identities=21% Similarity=0.305 Sum_probs=78.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++..+ .+|+++|+++.+++.|++++.... -++++++.+|+..-+.. ..+||+|+
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~-~~~fD~Ii 163 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAG----VKNVHVILGDGSKGFPP-KAPYDVII 163 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCGG-GCCEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcC----CCCcEEEECCcccCCCC-CCCccEEE
Confidence 3567899999999999999998765 789999999999999999986542 24699999998332221 24599999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCC
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
++..-+. +. +. +.+.|+|||++++..+.
T Consensus 164 ~~~~~~~-------~~-----~~-~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 164 VTAGAPK-------IP-----EP-LIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp ECSBBSS-------CC-----HH-HHHTEEEEEEEEEEECS
T ss_pred ECCcHHH-------HH-----HH-HHHhcCCCcEEEEEEec
Confidence 9865322 11 24 57799999999987654
No 191
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.02 E-value=9.3e-11 Score=105.58 Aligned_cols=111 Identities=10% Similarity=-0.025 Sum_probs=79.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcC-HHHHHHH---HHhhhhhccccCCCCeEEEEccHHHHHHhcCCce
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDID-QEVVDFC---RRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKF 179 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid-~~vi~~a---r~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~y 179 (339)
.++.+|||||||+|..+..+++..+..+|++||++ +.+++.| ++...... -++++++.+|+.++-......+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~----~~~v~~~~~d~~~l~~~~~d~v 98 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG----LSNVVFVIAAAESLPFELKNIA 98 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC----CSSEEEECCBTTBCCGGGTTCE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC----CCCeEEEEcCHHHhhhhccCeE
Confidence 34678999999999999999865667899999999 7777776 66654332 3679999999876521123567
Q ss_pred eEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 180 DVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
|.|.+..+.+.. .........++++. +++.|+|||.+++
T Consensus 99 ~~i~~~~~~~~~-~~~~~~~~~~~l~~-~~r~LkpGG~l~i 137 (225)
T 3p2e_A 99 DSISILFPWGTL-LEYVIKPNRDILSN-VADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEESCCHHH-HHHHHTTCHHHHHH-HHTTEEEEEEEEE
T ss_pred EEEEEeCCCcHH-hhhhhcchHHHHHH-HHHhcCCCcEEEE
Confidence 777777653210 00001123578998 8999999999988
No 192
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=99.02 E-value=3.7e-09 Score=99.26 Aligned_cols=171 Identities=16% Similarity=0.226 Sum_probs=108.6
Q ss_pred CCeEEEEecchhHHHHHHH----hcCCCCEEEEEEcCHH-----------HHHHHHHhhhhhccccCCCCe--EEEEccH
Q 019550 106 PKTVFIMGGGEGSAAREAL----KHKSLEKVVMCDIDQE-----------VVDFCRRFLTVNQEAFCSKKL--NLVVNDA 168 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~----~~~~~~~v~~VEid~~-----------vi~~ar~~f~~~~~~~~~~rv--~v~~~D~ 168 (339)
+-+||++|.|+|......+ +..+..++..+.++.. .-++.+..+... ..++..++ +++.+|+
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~-p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERV-PEYEGERLSLKVLLGDA 175 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHC-SEEECSSEEEEEEESCH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhC-ccccCCcEEEEEEechH
Confidence 4579999999998554332 3345556654443321 112222222111 11234554 6889999
Q ss_pred HHHHHhcC-CceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCc
Q 019550 169 KAELEKRN-EKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKH 247 (339)
Q Consensus 169 ~~~l~~~~-~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~ 247 (339)
++.+.... .++|+|+.|+|.|.. + ..|++.++|+. ++++++|||++++.+. -..+.+.|+++.-.
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~k-N--PeLWs~e~f~~-l~~~~~pgg~laTYta----------ag~VRR~L~~aGF~ 241 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYK-N--PELWTLDFLSL-IKERIDEKGYWVSYSS----------SLSVRKSLLTLGFK 241 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTT-S--GGGGSHHHHHH-HHTTEEEEEEEEESCC----------CHHHHHHHHHTTCE
T ss_pred HHHHhhhcccceeEEEeCCCCccc-C--cccCCHHHHHH-HHHHhCCCcEEEEEeC----------cHHHHHHHHHCCCE
Confidence 99998764 479999999998862 3 48999999999 8999999999998642 13567889998777
Q ss_pred eEEEEEeecccCCceeEEEEecCC-C-CCCHHHHHHHHHhcCcccccccCHH
Q 019550 248 VVAYTAHVPSFADTWGWVMASDQP-F-SINAEEIDNRIKSRINAELLYLNGA 297 (339)
Q Consensus 248 v~~~~~~iP~~~~~~~~~~as~~p-~-~~~~~~l~~r~~~~~~~~~~yy~~~ 297 (339)
|.- +|.+|+...+++|+..+ . +++..+.. ++... +...-|.|+.
T Consensus 242 V~k----~~G~g~KReml~A~~~~~~~pl~~~~~~-~~~~s-~aaiPyRDp~ 287 (308)
T 3vyw_A 242 VGS----SREIGRKRKGTVASLKAPVPPMEENEVR-KLVLS-PFAVPMRDEK 287 (308)
T ss_dssp EEE----EECC---CEEEEEESSSCCCCCCHHHHH-HHHHC-TTCCCCCCSS
T ss_pred EEe----cCCCCCCCceeEEecCCCCCCCChHHHH-HHhcC-CCeeeCcCCC
Confidence 653 57788777899998653 2 45544433 33222 2345566644
No 193
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.01 E-value=6.8e-10 Score=98.76 Aligned_cols=107 Identities=21% Similarity=0.291 Sum_probs=80.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhcc-ccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQE-AFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~-~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
.+..+||+||||+|..+..+++.. +..+|+++|+++.+++.+++++..... .+..++++++.+|+..... ..++||+
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 154 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDA 154 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcCE
Confidence 356799999999999999988764 346999999999999999998764310 0013589999999874322 2467999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCC
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
|+++..-+ .+ ++. +.+.|+|||++++..++
T Consensus 155 i~~~~~~~-------~~-----~~~-~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAP-------VV-----PQA-LIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBS-------SC-----CHH-HHHTEEEEEEEEEEESC
T ss_pred EEECCchH-------HH-----HHH-HHHhcCCCcEEEEEEec
Confidence 99987532 11 245 67899999999987643
No 194
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.01 E-value=7.7e-10 Score=98.62 Aligned_cols=98 Identities=19% Similarity=0.378 Sum_probs=77.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|..+..+++.. .+|++||+++.+++.+++.+... ++++++.+|+.+.+. ..++||+|+
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~------~~v~~~~~d~~~~~~-~~~~fD~v~ 139 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY------NNIKLILGDGTLGYE-EEKPYDRVV 139 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC------SSEEEEESCGGGCCG-GGCCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc------CCeEEEECCcccccc-cCCCccEEE
Confidence 456799999999999999998863 79999999999999999987643 289999999876332 246899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
++..-+. +. +. +.+.|+|||++++...
T Consensus 140 ~~~~~~~-------~~-----~~-~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 140 VWATAPT-------LL-----CK-PYEQLKEGGIMILPIG 166 (231)
T ss_dssp ESSBBSS-------CC-----HH-HHHTEEEEEEEEEEEC
T ss_pred ECCcHHH-------HH-----HH-HHHHcCCCcEEEEEEc
Confidence 9865321 11 34 5789999999988754
No 195
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.01 E-value=4.1e-10 Score=99.63 Aligned_cols=114 Identities=11% Similarity=0.017 Sum_probs=76.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+|||||||+|.++..+++..+..+|++||+++.+++.+.+..........-++++++.+|+.+ +....+. |.|+
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~-l~~~~~~-d~v~ 103 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER-LPPLSGV-GELH 103 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT-CCSCCCE-EEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh-CCCCCCC-CEEE
Confidence 3567899999999999999999877889999999999888543332111000123689999999876 3323344 7777
Q ss_pred ecCCCCCCCCc-cccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGP-CYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p-~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+..+... .. ...--...+++. +++.|+|||++++..
T Consensus 104 ~~~~~~~--~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 104 VLMPWGS--LLRGVLGSSPEMLRG-MAAVCRPGASFLVAL 140 (218)
T ss_dssp EESCCHH--HHHHHHTSSSHHHHH-HHHTEEEEEEEEEEE
T ss_pred EEccchh--hhhhhhccHHHHHHH-HHHHcCCCcEEEEEe
Confidence 5543110 00 000001478898 799999999998854
No 196
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.01 E-value=1.4e-09 Score=93.19 Aligned_cols=121 Identities=14% Similarity=0.162 Sum_probs=81.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++++|||||||+|.++..+++.. +|++||+|+.+++. .++++++.+|+.+.+. .++||+|+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------------~~~~~~~~~d~~~~~~--~~~fD~i~ 83 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------------HRGGNLVRADLLCSIN--QESVDVVV 83 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------------CSSSCEEECSTTTTBC--GGGCSEEE
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------------ccCCeEEECChhhhcc--cCCCCEEE
Confidence 356799999999999999998843 99999999999987 2578999999877432 37899999
Q ss_pred ecCCCCCCCCc---cccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH-CCceEE
Q 019550 184 GDLADPVEGGP---CYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV-FKHVVA 250 (339)
Q Consensus 184 ~D~~d~~~~~p---~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~-F~~v~~ 250 (339)
++++-.....+ ....-..++++. +.+.| |||.+++.... ......+.+.+++. |..+..
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l-pgG~l~~~~~~------~~~~~~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDR-FVDAV-TVGMLYLLVIE------ANRPKEVLARLEERGYGTRIL 146 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHH-HHHHC-CSSEEEEEEEG------GGCHHHHHHHHHHTTCEEEEE
T ss_pred ECCCCccCCccccccCCcchHHHHHH-HHhhC-CCCEEEEEEec------CCCHHHHHHHHHHCCCcEEEE
Confidence 98763210000 000012367777 56677 99998875421 12344566666665 443333
No 197
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.01 E-value=1.1e-09 Score=106.93 Aligned_cols=110 Identities=13% Similarity=0.105 Sum_probs=80.1
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhh-----ccccCCCCeEEEEccHHHHHHh-cCC
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVN-----QEAFCSKKLNLVVNDAKAELEK-RNE 177 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~-----~~~~~~~rv~v~~~D~~~~l~~-~~~ 177 (339)
.+..+|||||||+|.++..+++..+..+|++||+++.++++|++..... ......++++++.+|+.+.--. .-.
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~ 251 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIA 251 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccC
Confidence 4567899999999999999987677678999999999999998864211 1112237899999998764211 114
Q ss_pred ceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 178 KFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 178 ~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
.+|+|+++.+- . .+ . ....++. +.+.|+|||.+++.
T Consensus 252 ~aDVVf~Nn~~-F--~p--d--l~~aL~E-i~RvLKPGGrIVss 287 (438)
T 3uwp_A 252 NTSVIFVNNFA-F--GP--E--VDHQLKE-RFANMKEGGRIVSS 287 (438)
T ss_dssp TCSEEEECCTT-C--CH--H--HHHHHHH-HHTTSCTTCEEEES
T ss_pred CccEEEEcccc-c--Cc--h--HHHHHHH-HHHcCCCCcEEEEe
Confidence 69999998652 1 11 1 2355677 67899999999875
No 198
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.01 E-value=2.9e-10 Score=106.62 Aligned_cols=114 Identities=18% Similarity=0.202 Sum_probs=82.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccc---cCCCCeEEEEccHHHHH-----Hhc
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEA---FCSKKLNLVVNDAKAEL-----EKR 175 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~---~~~~rv~v~~~D~~~~l-----~~~ 175 (339)
+++.+||+||||+|..+..+++. +..+++++|+++.+++.|++.+...... ....+++++.+|+.+.. ...
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 35789999999999999988874 5679999999999999999987543100 01357999999987642 112
Q ss_pred CCceeEEEecCCCCCCCCccccC-CcHHHHHHHHccccCCCcEEEEec
Q 019550 176 NEKFDVIFGDLADPVEGGPCYQL-YTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 176 ~~~yDvIi~D~~d~~~~~p~~~L-~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
.++||+|++...-.+ .. ..+ ....+++. +++.|+|||++++..
T Consensus 112 ~~~fD~V~~~~~l~~--~~-~~~~~~~~~l~~-~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 112 QMCFDICSCQFVCHY--SF-ESYEQADMMLRN-ACERLSPGGYFIGTT 155 (313)
T ss_dssp TCCEEEEEEETCGGG--GG-GSHHHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred CCCEEEEEEecchhh--cc-CCHHHHHHHHHH-HHHHhCCCcEEEEec
Confidence 358999999764222 00 000 12478998 799999999999864
No 199
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.00 E-value=8.5e-10 Score=103.71 Aligned_cols=114 Identities=13% Similarity=0.131 Sum_probs=75.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccC--CCCeEEEEccH----H-HHHHh--
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFC--SKKLNLVVNDA----K-AELEK-- 174 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~--~~rv~v~~~D~----~-~~l~~-- 174 (339)
+...+|||||||+|..+..+++ .+..+|++||+++.+++.|++.......... ..+++++++|. . .-|..
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~-~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFY-GEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCCeEEEEecCCcHhHHHHHh-cCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 3467999999999976555555 3457899999999999999998754311000 01256777776 1 22322
Q ss_pred cCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 175 RNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 175 ~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
..++||+|++-..-.....+ .+ ...+++. ++++|+|||++++..
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~-~~--~~~~l~~-~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHP-RH--YATVMNN-LSELTASGGKVLITT 169 (302)
T ss_dssp CSSCEEEEEEESCGGGTCST-TT--HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCH-HH--HHHHHHH-HHHHcCCCCEEEEEe
Confidence 24689999876431110001 11 2588999 899999999998864
No 200
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.98 E-value=9e-10 Score=108.49 Aligned_cols=108 Identities=11% Similarity=0.123 Sum_probs=79.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHH-------HHhhhhhccccCCCCeEEEEccHHH---HHH
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFC-------RRFLTVNQEAFCSKKLNLVVNDAKA---ELE 173 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a-------r~~f~~~~~~~~~~rv~v~~~D~~~---~l~ 173 (339)
.+..+|||||||+|.++..+++..+..+|++||+++.+++.| ++++...+. ...+++++.+|+.. .+.
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl--~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGM--RLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTB--CCCCEEEEESSCSTTCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCC--CCCceEEEEcCccccccccc
Confidence 356799999999999999999866667899999999999999 666554321 12689999987542 122
Q ss_pred hcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 174 KRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 174 ~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
...++||+|+++.+- . .+ . -.+.++. +.+.|+|||.+++.
T Consensus 319 ~~~~~FDvIvvn~~l-~--~~--d--~~~~L~e-l~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 319 ELIPQCDVILVNNFL-F--DE--D--LNKKVEK-ILQTAKVGCKIISL 358 (433)
T ss_dssp HHGGGCSEEEECCTT-C--CH--H--HHHHHHH-HHTTCCTTCEEEES
T ss_pred cccCCCCEEEEeCcc-c--cc--c--HHHHHHH-HHHhCCCCeEEEEe
Confidence 223679999987432 1 11 1 2356778 78999999999875
No 201
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.97 E-value=4.6e-10 Score=107.87 Aligned_cols=109 Identities=13% Similarity=0.137 Sum_probs=82.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
..+++|||||||+|..+..+++..|..+++++|+ |.+++.|++++..... .++++++.+|..+.-...++.||+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~p~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSG---SERIHGHGANLLDRDVPFPTGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTT---GGGEEEEECCCCSSSCCCCCCCSEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCc---ccceEEEEccccccCCCCCCCcCEEE
Confidence 4678999999999999999998777889999999 9999999998764321 36899999997642000236899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-... .. . ....+++. +++.|+|||.+++.
T Consensus 254 ~~~vlh~~-~~-~--~~~~~l~~-~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 254 MSQFLDCF-SE-E--EVISILTR-VAQSIGKDSKVYIM 286 (363)
T ss_dssp EESCSTTS-CH-H--HHHHHHHH-HHHHCCTTCEEEEE
T ss_pred EechhhhC-CH-H--HHHHHHHH-HHHhcCCCcEEEEE
Confidence 86542110 00 0 12367888 79999999988764
No 202
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.97 E-value=9.7e-10 Score=97.98 Aligned_cols=101 Identities=12% Similarity=0.176 Sum_probs=77.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+||+||||+|..+..+++.. .+++++|+++.+++.|++.+ ++++++.+|+.+.- ..++||+|+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~D~v~ 105 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL---------PDATLHQGDMRDFR--LGRKFSAVV 105 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC---------TTCEEEECCTTTCC--CSSCEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC---------CCCEEEECCHHHcc--cCCCCcEEE
Confidence 567899999999999999998864 38999999999999999873 46899999987632 257899999
Q ss_pred ecC--CCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDL--ADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~--~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+.. ..... .+ -....+++. +++.|+|||.+++..
T Consensus 106 ~~~~~~~~~~-~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 106 SMFSSVGYLK-TT---EELGAAVAS-FAEHLEPGGVVVVEP 141 (239)
T ss_dssp ECTTGGGGCC-SH---HHHHHHHHH-HHHTEEEEEEEEECC
T ss_pred EcCchHhhcC-CH---HHHHHHHHH-HHHhcCCCeEEEEEe
Confidence 532 11110 00 012478898 799999999999864
No 203
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.96 E-value=6.5e-10 Score=97.59 Aligned_cols=97 Identities=16% Similarity=0.125 Sum_probs=76.0
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
++.+||+||||+|..+..+ +..+++++|+++.+++.+++.+ ++++++.+|+.+. ....++||+|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~fD~v~~ 101 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEAL-PFPGESFDVVLL 101 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTSC-CSCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcccccC-CCCCCcEEEEEE
Confidence 6789999999999998876 3348999999999999999875 4688899997652 223468999998
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
...-.. .+ ....+++. +++.|+|||.+++..
T Consensus 102 ~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 102 FTTLEF--VE----DVERVLLE-ARRVLRPGGALVVGV 132 (211)
T ss_dssp ESCTTT--CS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred cChhhh--cC----CHHHHHHH-HHHHcCCCCEEEEEe
Confidence 765322 11 13578998 799999999998865
No 204
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.96 E-value=3.8e-09 Score=97.85 Aligned_cols=108 Identities=13% Similarity=0.080 Sum_probs=81.1
Q ss_pred CCCeEEEEecch---hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH--H-------
Q 019550 105 NPKTVFIMGGGE---GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE--L------- 172 (339)
Q Consensus 105 ~p~~VL~IG~G~---G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~--l------- 172 (339)
...+|||||||+ |.+...+.+..+..+|++||+||.|++.||+.+.. .++++++.+|+.+. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT------CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC------CCCeEEEEeeCCCchhhhccchhh
Confidence 457999999999 98877666666678999999999999999998742 47899999998753 2
Q ss_pred HhcC-CceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 173 EKRN-EKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 173 ~~~~-~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
...+ .+||+|++...-.. -+ .. -...+++. +++.|+|||.|++...
T Consensus 151 ~~~d~~~~d~v~~~~vlh~--~~-d~-~~~~~l~~-~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHY--LS-PD-VVDRVVGA-YRDALAPGSYLFMTSL 197 (274)
T ss_dssp HHCCTTSCCEEEETTTGGG--SC-TT-THHHHHHH-HHHHSCTTCEEEEEEE
T ss_pred ccCCCCCCEEEEEechhhh--CC-cH-HHHHHHHH-HHHhCCCCcEEEEEEe
Confidence 1111 47999998764221 01 00 13578998 7999999999988653
No 205
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.95 E-value=2.2e-09 Score=93.00 Aligned_cols=123 Identities=15% Similarity=0.149 Sum_probs=84.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCC---------CEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEE-EccHHHHHH
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSL---------EKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLV-VNDAKAELE 173 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~---------~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~-~~D~~~~l~ 173 (339)
.+..+|||||||+|.++..+++..+. .+|+++|+++.. ..++++++ .+|..+.-.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------------cCCCCeEEEeccCCCHHH
Confidence 45679999999999999999987554 789999999831 02568888 888654311
Q ss_pred -----h-c-CCceeEEEecCCCCCCCCccccCCc--------HHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHH
Q 019550 174 -----K-R-NEKFDVIFGDLADPVEGGPCYQLYT--------KSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIY 238 (339)
Q Consensus 174 -----~-~-~~~yDvIi~D~~d~~~~~p~~~L~t--------~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~ 238 (339)
. . .++||+|+++...... +. .... ..+++. +.+.|+|||.+++.... ......+.
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~-~~--~~~~~~~~~~~~~~~l~~-~~~~LkpgG~lv~~~~~------~~~~~~~~ 155 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNAT-GF--RDLDHDRLISLCLTLLSV-TPDILQPGGTFLCKTWA------GSQSRRLQ 155 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCC-SC--HHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEECC------SGGGHHHH
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCC-CC--cccCHHHHHHHHHHHHHH-HHHHhcCCCEEEEEecC------CccHHHHH
Confidence 1 1 3579999998742211 11 1011 367888 78999999999987422 12345667
Q ss_pred HHHHhHCCceEEE
Q 019550 239 NTIKQVFKHVVAY 251 (339)
Q Consensus 239 ~~l~~~F~~v~~~ 251 (339)
+.++..|..+..+
T Consensus 156 ~~l~~~f~~v~~~ 168 (196)
T 2nyu_A 156 RRLTEEFQNVRII 168 (196)
T ss_dssp HHHHHHEEEEEEE
T ss_pred HHHHHHhcceEEE
Confidence 7777888776654
No 206
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.93 E-value=3e-09 Score=100.54 Aligned_cols=106 Identities=14% Similarity=0.028 Sum_probs=81.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
++.+||+||||+|..+..+++..|..+++++|+ |.+++.+++++..... .++++++.+|..+ ..+..||+|++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~---~~p~~~D~v~~ 241 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL---SGRAQVVVGSFFD---PLPAGAGGYVL 241 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC---TTTEEEEECCTTS---CCCCSCSEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc---CcCeEEecCCCCC---CCCCCCcEEEE
Confidence 467999999999999999998778889999999 9999999998865422 4789999999863 22348999998
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
...-.. -+. -....+++. +++.|+|||.+++..
T Consensus 242 ~~vlh~--~~~--~~~~~~l~~-~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 242 SAVLHD--WDD--LSAVAILRR-CAEAAGSGGVVLVIE 274 (332)
T ss_dssp ESCGGG--SCH--HHHHHHHHH-HHHHHTTTCEEEEEE
T ss_pred ehhhcc--CCH--HHHHHHHHH-HHHhcCCCCEEEEEe
Confidence 654211 000 002478999 799999999988753
No 207
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.93 E-value=5.5e-09 Score=100.51 Aligned_cols=106 Identities=14% Similarity=0.098 Sum_probs=82.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++..+..+++++|+ |.+++.|++++..... .++++++.+|..+ ..+..||+|+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l---~~~v~~~~~d~~~---~~p~~~D~v~ 273 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL---ADRCEILPGDFFE---TIPDGADVYL 273 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC---TTTEEEEECCTTT---CCCSSCSEEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc---CCceEEeccCCCC---CCCCCceEEE
Confidence 4578999999999999999998888889999999 9999999998865422 4789999999863 2234799999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-.. -+ .-....+++. +++.|+|||.+++.
T Consensus 274 ~~~vlh~--~~--d~~~~~~L~~-~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 274 IKHVLHD--WD--DDDVVRILRR-IATAMKPDSRLLVI 306 (369)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHTTCCTTCEEEEE
T ss_pred hhhhhcc--CC--HHHHHHHHHH-HHHHcCCCCEEEEE
Confidence 8654211 00 0001268999 79999999988875
No 208
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.92 E-value=1.7e-09 Score=98.76 Aligned_cols=95 Identities=16% Similarity=0.188 Sum_probs=75.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|.++..+++..+..+++++|+++.+++.|++.. ++++++.+|+.+. ....++||+|+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~fD~v~ 153 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHRL-PFSDTSMDAII 153 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTSC-SBCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhhC-CCCCCceeEEE
Confidence 4567999999999999999998655679999999999999999863 5678899987542 22346899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+... + .+++. +.+.|+|||.+++..
T Consensus 154 ~~~~------~-------~~l~~-~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 154 RIYA------P-------CKAEE-LARVVKPGGWVITAT 178 (269)
T ss_dssp EESC------C-------CCHHH-HHHHEEEEEEEEEEE
T ss_pred EeCC------h-------hhHHH-HHHhcCCCcEEEEEE
Confidence 7532 1 23677 788999999998865
No 209
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.92 E-value=2.4e-09 Score=106.91 Aligned_cols=106 Identities=14% Similarity=0.153 Sum_probs=80.2
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
++++|||||||+|.++..+++ .+..+|++||+++ +++.|++.+..++. .++++++.+|+.++ ..+++||+|++
T Consensus 158 ~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~-~l~~A~~~~~~~gl---~~~v~~~~~d~~~~--~~~~~fD~Ivs 230 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST-MAQHAEVLVKSNNL---TDRIVVIPGKVEEV--SLPEQVDIIIS 230 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHH-HHHHHHHHHHHTTC---TTTEEEEESCTTTC--CCSSCEEEEEC
T ss_pred CCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHH-HHHHHHHHHHHcCC---CCcEEEEECchhhC--ccCCCeEEEEE
Confidence 567999999999999998888 4678999999999 89999998765432 47899999998763 22468999999
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
++..... .. . -..+.+.. +++.|+|||++++..
T Consensus 231 ~~~~~~~-~~-e--~~~~~l~~-~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 231 EPMGYML-FN-E--RMLESYLH-AKKYLKPSGNMFPTI 263 (480)
T ss_dssp CCCHHHH-TC-H--HHHHHHHH-GGGGEEEEEEEESCE
T ss_pred eCchHhc-Cc-H--HHHHHHHH-HHHhcCCCCEEEEEe
Confidence 8651100 00 0 02356677 789999999998643
No 210
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.92 E-value=3.1e-09 Score=101.82 Aligned_cols=106 Identities=11% Similarity=0.087 Sum_probs=80.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|.++..+++..+..+++++|+ +.+++.|++++..... .++++++.+|+.+. .+..||+|+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~---~~~~~D~v~ 253 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL---ADRVTVAEGDFFKP---LPVTADVVL 253 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC---TTTEEEEECCTTSC---CSCCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC---CCceEEEeCCCCCc---CCCCCCEEE
Confidence 4568999999999999999998777789999999 9999999998765422 35899999998652 234599999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-.. -+ .-....+++. +++.|+|||.+++.
T Consensus 254 ~~~vl~~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~ 286 (374)
T 1qzz_A 254 LSFVLLN--WS--DEDALTILRG-CVRALEPGGRLLVL 286 (374)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEE
T ss_pred EeccccC--CC--HHHHHHHHHH-HHHhcCCCcEEEEE
Confidence 8754211 00 0001378998 79999999987764
No 211
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.91 E-value=3.3e-09 Score=104.37 Aligned_cols=99 Identities=17% Similarity=0.192 Sum_probs=80.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+|||+|||+|.++..+++. ..+|++||+++.+++.|+++...++. + ++++.+|+.+++. .+||+|+
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl----~-v~~~~~d~~~~~~---~~fD~Vv 358 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNV----D-AEFEVASDREVSV---KGFDTVI 358 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTC----C-EEEEECCTTTCCC---TTCSEEE
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCC----c-EEEEECChHHcCc---cCCCEEE
Confidence 45679999999999999999884 46999999999999999999876532 3 9999999987653 2799999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|++.. + ...++.+. +. .|+|+|++.+.+
T Consensus 359 ~dPPr~---g-----~~~~~~~~-l~-~l~p~givyvsc 387 (425)
T 2jjq_A 359 VDPPRA---G-----LHPRLVKR-LN-REKPGVIVYVSC 387 (425)
T ss_dssp ECCCTT---C-----SCHHHHHH-HH-HHCCSEEEEEES
T ss_pred EcCCcc---c-----hHHHHHHH-HH-hcCCCcEEEEEC
Confidence 998732 1 23467777 54 699999998875
No 212
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.90 E-value=2.3e-09 Score=97.61 Aligned_cols=99 Identities=19% Similarity=0.257 Sum_probs=75.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+||+||||+|..+..+++. ..++++||+++.+++.|++... . .++.+|+.+. ....++||+|+
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~--------~--~~~~~d~~~~-~~~~~~fD~v~ 119 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV--------K--NVVEAKAEDL-PFPSGAFEAVL 119 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC--------S--CEEECCTTSC-CSCTTCEEEEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC--------C--CEEECcHHHC-CCCCCCEEEEE
Confidence 46789999999999999999885 3689999999999999998743 1 1778887542 22346899999
Q ss_pred ecCC-CCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLA-DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~-d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+... ... .+ . ...+++. +++.|+|||.+++..
T Consensus 120 ~~~~~~~~--~~--~--~~~~l~~-~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 120 ALGDVLSY--VE--N--KDKAFSE-IRRVLVPDGLLIATV 152 (260)
T ss_dssp ECSSHHHH--CS--C--HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Ecchhhhc--cc--c--HHHHHHH-HHHHcCCCeEEEEEe
Confidence 8642 111 00 1 3588898 799999999998864
No 213
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.90 E-value=1.6e-09 Score=95.48 Aligned_cols=99 Identities=17% Similarity=0.220 Sum_probs=75.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH-HHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE-LEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~-l~~~~~~yDvI 182 (339)
.++.+||+||||+|..+..+++. + .+++++|+++.+++.+++.+. +++.+|+.++ +....++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~-----------~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLD-----------HVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSS-----------EEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCC-----------cEEEcchhhcCCCCCCCccCEE
Confidence 45789999999999999999986 5 799999999999999987641 5777887643 11224689999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
++...-.. .+ -..++++. +++.|+|||.+++..
T Consensus 98 ~~~~~l~~--~~----~~~~~l~~-~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 98 IFGDVLEH--LF----DPWAVIEK-VKPYIKQNGVILASI 130 (230)
T ss_dssp EEESCGGG--SS----CHHHHHHH-TGGGEEEEEEEEEEE
T ss_pred EECChhhh--cC----CHHHHHHH-HHHHcCCCCEEEEEe
Confidence 98654211 01 12588998 899999999998865
No 214
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.90 E-value=2.2e-09 Score=102.08 Aligned_cols=107 Identities=11% Similarity=0.132 Sum_probs=82.0
Q ss_pred CCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEec
Q 019550 106 PKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGD 185 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D 185 (339)
+.+|||||||+|..+..+++..|..+++++|+ |.+++.+++++..... .+|++++.+|..+.-....+.||+|++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDL---GGRVEFFEKNLLDARNFEGGAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC---GGGEEEEECCTTCGGGGTTCCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCC---CCceEEEeCCcccCcccCCCCccEEEEe
Confidence 78999999999999999998878889999999 8999999998765422 3689999999865421134679999986
Q ss_pred CCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 186 LADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 186 ~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
..-... .. . ....+++. +++.|+|||.+++.
T Consensus 256 ~vlh~~-~~-~--~~~~~l~~-~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 256 DCLHYF-DA-R--EAREVIGH-AAGLVKPGGALLIL 286 (352)
T ss_dssp SCGGGS-CH-H--HHHHHHHH-HHHTEEEEEEEEEE
T ss_pred cccccC-CH-H--HHHHHHHH-HHHHcCCCCEEEEE
Confidence 542110 00 0 02478998 79999999988764
No 215
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.90 E-value=2.5e-09 Score=99.30 Aligned_cols=110 Identities=11% Similarity=0.085 Sum_probs=73.5
Q ss_pred CCCeEEEEecchhHHHHH----HHhcCCCCEE--EEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHH-----
Q 019550 105 NPKTVFIMGGGEGSAARE----ALKHKSLEKV--VMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELE----- 173 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~----l~~~~~~~~v--~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~----- 173 (339)
++.+||+||||+|.++.. ++...+..+| ++||++++|++.|++.+..... ...-++++..+|+.++..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN-LENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS-CTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC-CCcceEEEEecchhhhhhhhccc
Confidence 356899999999976543 3332344544 9999999999999998743211 111234556677765542
Q ss_pred hcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 174 KRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 174 ~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
...++||+|++...-..... ...+++. ++++|+|||.+++..
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d------~~~~l~~-~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD------IPATLKF-FHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC------HHHHHHH-HHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCC------HHHHHHH-HHHHcCCCcEEEEEE
Confidence 13578999998765322111 2468999 899999999998754
No 216
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.90 E-value=4.8e-09 Score=96.72 Aligned_cols=105 Identities=15% Similarity=0.091 Sum_probs=72.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHH-HHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA-ELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~-~l~~~~~~yDvI 182 (339)
.+..+|||||||+|.++..+++. ..+|++||+++.+++.|++++... .++....|... ......++||+|
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGGTTCCSEE
T ss_pred CCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccccccCCCccEE
Confidence 45679999999999999999884 368999999999999999986432 23333333211 001224689999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
+++..-.. -+.. -...+++. +.++| |||+++++..
T Consensus 115 v~~~~l~~--~~~~--~~~~~l~~-l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 115 LNDRLINR--FTTE--EARRACLG-MLSLV-GSGTVRASVK 149 (261)
T ss_dssp EEESCGGG--SCHH--HHHHHHHH-HHHHH-TTSEEEEEEE
T ss_pred EEhhhhHh--CCHH--HHHHHHHH-HHHhC-cCcEEEEEec
Confidence 99864211 0000 12357888 78899 9999998864
No 217
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.88 E-value=1e-09 Score=100.19 Aligned_cols=97 Identities=11% Similarity=0.070 Sum_probs=75.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++ +..+|++||+++.+++.+++. ++++++.+|+.+ +....++||+|+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~----------~~~~~~~~d~~~-~~~~~~~fD~v~ 99 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVH----------PQVEWFTGYAEN-LALPDKSVDGVI 99 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCC----------TTEEEECCCTTS-CCSCTTCBSEEE
T ss_pred CCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhc----------cCCEEEECchhh-CCCCCCCEeEEE
Confidence 4678999999999999999987 357999999999999877654 378999999865 232357899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-... + -...+++. +++.|+ ||.+++.
T Consensus 100 ~~~~l~~~--~----~~~~~l~~-~~~~Lk-gG~~~~~ 129 (261)
T 3ege_A 100 SILAIHHF--S----HLEKSFQE-MQRIIR-DGTIVLL 129 (261)
T ss_dssp EESCGGGC--S----SHHHHHHH-HHHHBC-SSCEEEE
T ss_pred EcchHhhc--c----CHHHHHHH-HHHHhC-CcEEEEE
Confidence 98652110 0 13578998 899999 9965554
No 218
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.88 E-value=7e-09 Score=98.85 Aligned_cols=132 Identities=15% Similarity=0.091 Sum_probs=91.3
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCC-----CEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCce
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSL-----EKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKF 179 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~-----~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~y 179 (339)
...+|||+|||+|+++..++++.+. .+++++|+|+.++++|+.++...+ .+++++.+|..... ..++|
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-----~~~~i~~~D~l~~~--~~~~f 202 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-----QKMTLLHQDGLANL--LVDPV 202 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-----CCCEEEESCTTSCC--CCCCE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-----CCceEEECCCCCcc--ccCCc
Confidence 4578999999999999988875432 689999999999999999987552 36899999986522 24689
Q ss_pred eEEEecCCCCCC--------CCc--cccC--CcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCC
Q 019550 180 DVIFGDLADPVE--------GGP--CYQL--YTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFK 246 (339)
Q Consensus 180 DvIi~D~~d~~~--------~~p--~~~L--~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~ 246 (339)
|+|+++++-... ..+ .... +...|++. +.+.|+|||++++-.... +........+.+.+.+.+.
T Consensus 203 D~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~-~~~~Lk~gG~~~~v~p~~--~~~~~~~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 203 DVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQ-GMRYTKPGGYLFFLVPDA--MFGTSDFAKVDKFIKKNGH 278 (344)
T ss_dssp EEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHH-HHHTEEEEEEEEEEEEGG--GGGSTTHHHHHHHHHHHEE
T ss_pred cEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHH-HHHHhCCCCEEEEEECch--hcCCchHHHHHHHHHhCCe
Confidence 999999872110 000 0001 12368998 789999999887654222 2222334566666666543
No 219
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.88 E-value=3.5e-09 Score=96.67 Aligned_cols=109 Identities=12% Similarity=0.060 Sum_probs=77.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHH------HHHHHHHhhhhhccccCCCCeEEEEcc-HHHH-HHh
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQE------VVDFCRRFLTVNQEAFCSKKLNLVVND-AKAE-LEK 174 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~------vi~~ar~~f~~~~~~~~~~rv~v~~~D-~~~~-l~~ 174 (339)
.+..+||+||||+|..+..+++.. +..+|+++|+++. +++.|++++..... .++++++.+| .... +.-
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~~~~~ 118 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL---GDRLTVHFNTNLSDDLGPI 118 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT---GGGEEEECSCCTTTCCGGG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC---CCceEEEECChhhhccCCC
Confidence 456799999999999999999864 4479999999997 99999998764321 3689999998 2111 111
Q ss_pred cCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 175 RNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 175 ~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
..++||+|++...-..... ...+.+. +++.++|||.+++..
T Consensus 119 ~~~~fD~v~~~~~l~~~~~------~~~~~~~-~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYFAS------ANALALL-FKNMAAVCDHVDVAE 159 (275)
T ss_dssp TTCCCSEEEEESCGGGSSC------HHHHHHH-HHHHTTTCSEEEEEE
T ss_pred CCCCEEEEEEccchhhCCC------HHHHHHH-HHHHhCCCCEEEEEE
Confidence 3478999998765221001 1245665 666777799988764
No 220
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.87 E-value=3.3e-09 Score=102.45 Aligned_cols=110 Identities=14% Similarity=0.102 Sum_probs=79.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+|||+|||+|.++.++++.....+|+++|+|+.+++.|++++...+. .++++++.+|+.+.- ...++||+|+
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl---~~~i~~~~~D~~~~~-~~~~~fD~Ii 291 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV---LDKIKFIQGDATQLS-QYVDSVDFAI 291 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC---GGGCEEEECCGGGGG-GTCSCEEEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC---CCceEEEECChhhCC-cccCCcCEEE
Confidence 456789999999999999999865445899999999999999999876532 368999999998743 3347899999
Q ss_pred ecCCCCCCCCc---cccCCcHHHHHHHHccccCCCcEEEE
Q 019550 184 GDLADPVEGGP---CYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 184 ~D~~d~~~~~p---~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
+|++-....+. ...+| .++++. +++.| .++.+++
T Consensus 292 ~npPyg~r~~~~~~~~~ly-~~~~~~-l~r~l-~g~~~~i 328 (373)
T 3tm4_A 292 SNLPYGLKIGKKSMIPDLY-MKFFNE-LAKVL-EKRGVFI 328 (373)
T ss_dssp EECCCC------CCHHHHH-HHHHHH-HHHHE-EEEEEEE
T ss_pred ECCCCCcccCcchhHHHHH-HHHHHH-HHHHc-CCeEEEE
Confidence 99874321111 11122 567777 78888 3333333
No 221
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.87 E-value=3.8e-08 Score=94.84 Aligned_cols=100 Identities=12% Similarity=0.154 Sum_probs=76.6
Q ss_pred CCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcC---------
Q 019550 106 PKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRN--------- 176 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~--------- 176 (339)
+++|||+|||+|.++..+++. ..+|++||+++.+++.|+++...++ -++++++.+|+.+++....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng----~~~v~~~~~d~~~~~~~~~~~~~~~~l~ 287 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANH----IDNVQIIRMAAEEFTQAMNGVREFNRLQ 287 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTT----CCSEEEECCCSHHHHHHHSSCCCCTTGG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEECCHHHHHHHHhhcccccccc
Confidence 578999999999999988873 5799999999999999999987653 2589999999999875422
Q ss_pred ------CceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCC
Q 019550 177 ------EKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 177 ------~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
.+||+|++|++.. + ...++++ .|+++|.++.-+..
T Consensus 288 ~~~~~~~~fD~Vv~dPPr~---g-----~~~~~~~-----~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 288 GIDLKSYQCETIFVDPPRS---G-----LDSETEK-----MVQAYPRILYISCN 328 (369)
T ss_dssp GSCGGGCCEEEEEECCCTT---C-----CCHHHHH-----HHTTSSEEEEEESC
T ss_pred ccccccCCCCEEEECcCcc---c-----cHHHHHH-----HHhCCCEEEEEECC
Confidence 2799999998743 1 1234444 45577777655433
No 222
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.87 E-value=8.2e-09 Score=98.66 Aligned_cols=106 Identities=12% Similarity=0.139 Sum_probs=80.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+|||||||+|..+..+++..+..+++++|+ |.+++.|++++..... .++++++.+|+.+. ....+|+|+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~---~~~~~D~v~ 261 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV---ADRMRGIAVDIYKE---SYPEADAVL 261 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC---TTTEEEEECCTTTS---CCCCCSEEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC---CCCEEEEeCccccC---CCCCCCEEE
Confidence 4578999999999999999998777789999999 9999999998865422 46799999998653 223459999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-.. -+ .-....+++. +++.|+|||.+++.
T Consensus 262 ~~~vlh~--~~--d~~~~~~l~~-~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 262 FCRILYS--AN--EQLSTIMCKK-AFDAMRSGGRLLIL 294 (359)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHTTCCTTCEEEEE
T ss_pred Eechhcc--CC--HHHHHHHHHH-HHHhcCCCCEEEEE
Confidence 8654211 00 0012578898 79999999988654
No 223
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.87 E-value=2.4e-09 Score=104.12 Aligned_cols=97 Identities=19% Similarity=0.283 Sum_probs=71.1
Q ss_pred CCCCeEEEEecc-------hhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHH--HHH-
Q 019550 104 QNPKTVFIMGGG-------EGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA--ELE- 173 (339)
Q Consensus 104 ~~p~~VL~IG~G-------~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~--~l~- 173 (339)
.++.+||+|||| +|.+...+.++++..+|++||+++++. . ..++++++++|+.+ |+.
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~-----~~~rI~fv~GDa~dlpf~~~ 281 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V-----DELRIRTIQGDQNDAEFLDR 281 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G-----CBTTEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h-----cCCCcEEEEecccccchhhh
Confidence 467899999999 455554444555778999999999972 1 24799999999865 331
Q ss_pred --hcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 174 --KRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 174 --~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
...++||+|++|..... . -...+|+. +++.|||||++++.
T Consensus 282 l~~~d~sFDlVisdgsH~~---~----d~~~aL~e-l~rvLKPGGvlVi~ 323 (419)
T 3sso_A 282 IARRYGPFDIVIDDGSHIN---A----HVRTSFAA-LFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHCCEEEEEECSCCCH---H----HHHHHHHH-HGGGEEEEEEEEEE
T ss_pred hhcccCCccEEEECCcccc---h----hHHHHHHH-HHHhcCCCeEEEEE
Confidence 11478999999864211 0 12478898 79999999999985
No 224
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.87 E-value=1.6e-09 Score=101.98 Aligned_cols=106 Identities=10% Similarity=0.166 Sum_probs=80.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++..+..+++++|++ .+++.|++.+..... .++++++.+|..+. ..++.||+|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~--~~~~~~D~v~ 237 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV---ASRYHTIAGSAFEV--DYGNDYDLVL 237 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC---GGGEEEEESCTTTS--CCCSCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC---CcceEEEecccccC--CCCCCCcEEE
Confidence 45689999999999999999987777899999999 999999998765421 35799999998653 2234599999
Q ss_pred ecCC-CCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLA-DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~-d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+... ..+ .. -....+++. +++.|+|||.+++.
T Consensus 238 ~~~~l~~~--~~---~~~~~~l~~-~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 238 LPNFLHHF--DV---ATCEQLLRK-IKTALAVEGKVIVF 270 (335)
T ss_dssp EESCGGGS--CH---HHHHHHHHH-HHHHEEEEEEEEEE
T ss_pred EcchhccC--CH---HHHHHHHHH-HHHhCCCCcEEEEE
Confidence 8543 111 00 012478898 79999999977664
No 225
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.86 E-value=5.5e-09 Score=99.63 Aligned_cols=106 Identities=21% Similarity=0.255 Sum_probs=80.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+++..+..+++++|+ +.+++.|++++..... .++++++.+|..+.+ +..||+|+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~~---~~~~D~v~ 254 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL---SDRVDVVEGDFFEPL---PRKADAII 254 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC---TTTEEEEECCTTSCC---SSCEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC---CCceEEEeCCCCCCC---CCCccEEE
Confidence 3567999999999999999998777788999999 9999999998765432 358999999986532 34599999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-.. -+ .-....+++. +++.|+|||.+++.
T Consensus 255 ~~~vl~~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~ 287 (360)
T 1tw3_A 255 LSFVLLN--WP--DHDAVRILTR-CAEALEPGGRILIH 287 (360)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHTEEEEEEEEEE
T ss_pred EcccccC--CC--HHHHHHHHHH-HHHhcCCCcEEEEE
Confidence 8654211 00 0001378999 79999999988764
No 226
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.86 E-value=4.8e-09 Score=99.05 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=80.6
Q ss_pred CeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecC
Q 019550 107 KTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDL 186 (339)
Q Consensus 107 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~ 186 (339)
.+||+||||+|..+..+++..|..+++++|+ |.+++.+++.+..... .++++++.+|..+. .++.||+|++..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~---~~~~~D~v~~~~ 241 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA---GERVSLVGGDMLQE---VPSNGDIYLLSR 241 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH---TTSEEEEESCTTTC---CCSSCSEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC---CCcEEEecCCCCCC---CCCCCCEEEEch
Confidence 8999999999999999998777789999999 9999999998764322 47899999998652 346799999865
Q ss_pred CCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 187 ADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 187 ~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
.-... .. -....+++. +++.|+|||.+++.
T Consensus 242 vl~~~-~~---~~~~~~l~~-~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 242 IIGDL-DE---AASLRLLGN-CREAMAGDGRVVVI 271 (334)
T ss_dssp CGGGC-CH---HHHHHHHHH-HHHHSCTTCEEEEE
T ss_pred hccCC-CH---HHHHHHHHH-HHHhcCCCCEEEEE
Confidence 42110 00 012378898 79999999988775
No 227
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.86 E-value=3.1e-08 Score=97.49 Aligned_cols=102 Identities=16% Similarity=0.147 Sum_probs=80.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh---cCCcee
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK---RNEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~---~~~~yD 180 (339)
....+|||+|||+|.++..+++. ..+|++||+++.+++.|+++...++ -++++++.+|+.+++.. ..++||
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~----~~~v~f~~~d~~~~l~~~~~~~~~fD 358 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNG----LQNVTFYHENLEEDVTKQPWAKNGFD 358 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCTTSCCSSSGGGTTCCS
T ss_pred CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcC----CCceEEEECCHHHHhhhhhhhcCCCC
Confidence 34578999999999999999885 5799999999999999999987653 25899999999876532 235799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|++|++... ..++.+. +. .++|++++.+.+
T Consensus 359 ~Vv~dPPr~g---------~~~~~~~-l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 359 KVLLDPARAG---------AAGVMQQ-II-KLEPIRIVYVSC 389 (433)
T ss_dssp EEEECCCTTC---------CHHHHHH-HH-HHCCSEEEEEES
T ss_pred EEEECCCCcc---------HHHHHHH-HH-hcCCCeEEEEEC
Confidence 9999987431 1266776 44 589999887764
No 228
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.86 E-value=4.3e-10 Score=101.88 Aligned_cols=114 Identities=11% Similarity=0.115 Sum_probs=78.5
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhcccc------------C-------------CC
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAF------------C-------------SK 159 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~------------~-------------~~ 159 (339)
++++||+||||+|..+..+++.. ..+|+++|+++.+++.+++.+......+ + ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACES-FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcc-cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 45789999999999998887743 3589999999999999999875321000 0 01
Q ss_pred Ce-EEEEccHHHHHHhcC---CceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 160 KL-NLVVNDAKAELEKRN---EKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 160 rv-~v~~~D~~~~l~~~~---~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
++ +++.+|+.+...... ++||+|++...-.. .+...-....+++. ++++|+|||.+++..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~--~~~~~~~~~~~l~~-~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDA--ACPDLPAYRTALRN-LGSLLKPGGFLVMVD 198 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHH--HCSSHHHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhh--hcCChHHHHHHHHH-HHhhCCCCcEEEEEe
Confidence 27 899999876432123 68999998754110 00000012478888 799999999988753
No 229
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.85 E-value=8e-09 Score=95.74 Aligned_cols=108 Identities=19% Similarity=0.226 Sum_probs=74.7
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEc-CHHHHHHHHHhhhhhc---cccC---CCCeEEEEcc---HHHHHHh
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDI-DQEVVDFCRRFLTVNQ---EAFC---SKKLNLVVND---AKAELEK 174 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEi-d~~vi~~ar~~f~~~~---~~~~---~~rv~v~~~D---~~~~l~~ 174 (339)
..++||+||||+|.++..+++. +..+|+++|+ ++.+++.|+++...+. ..+. .++++++..| ....+..
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 5679999999999999988874 5569999999 9999999999984321 0010 1478887433 2222221
Q ss_pred --cCCceeEEEe-cCCCCCCCCccccCCcHHHHHHHHccccC---C--CcEEEEe
Q 019550 175 --RNEKFDVIFG-DLADPVEGGPCYQLYTKSFYERILKPKLN---D--NGIFVTQ 221 (339)
Q Consensus 175 --~~~~yDvIi~-D~~d~~~~~p~~~L~t~ef~~~~~~~~L~---~--gGilv~~ 221 (339)
..++||+|++ |..... + ....+++. +++.|+ | ||++++-
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~---~----~~~~ll~~-l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFH---Q----AHDALLRS-VKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHSCSSBSEEEEESCCSCG---G----GHHHHHHH-HHHHBCCTTTCTTCEEEEE
T ss_pred hccCCCCCEEEEeCcccCh---H----HHHHHHHH-HHHHhcccCCCCCCEEEEE
Confidence 3578999987 554221 1 13578888 789999 9 9976553
No 230
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.84 E-value=2.1e-10 Score=105.21 Aligned_cols=114 Identities=15% Similarity=0.118 Sum_probs=74.9
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccC-------------------------CC
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFC-------------------------SK 159 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~-------------------------~~ 159 (339)
+..+|||||||+|..+..+++ .+..+|+++|+++.+++.|++++.....+++ ..
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~-~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAAC-DSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGG-GTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHH-hhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 356899999999988776554 3456899999999999999998643211110 01
Q ss_pred CeE-EEEccHHHHHH---hcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 160 KLN-LVVNDAKAELE---KRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 160 rv~-v~~~D~~~~l~---~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+++ ++.+|..+... ...++||+|++...-... .+... --...++. +++.|||||.|++..
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i-~~~~~-~~~~~l~~-i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECA-CCSLD-AYRAALCN-LASLLKPGGHLVTTV 197 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHH-CSSHH-HHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHh-cCCHH-HHHHHHHH-HHHHcCCCcEEEEEE
Confidence 244 88888765211 124689999998642100 00000 01357788 789999999998764
No 231
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.84 E-value=6.2e-09 Score=92.35 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=75.2
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHH--------------
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA-------------- 170 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~-------------- 170 (339)
++++||++|+| ..+.++++.. ..+|+.||.|++..+.+++++...+.+ ...+++++.+|+.+
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~g~~-~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELP-GKHVTSVESDRAWARMMKAWLAANPPA-EGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHSCCC-TTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCCEEEEECch--HHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCCceEEEEeCchhhhcccccccchhhh
Confidence 57899999985 5777777743 689999999999999999999764310 03689999999643
Q ss_pred ----HHHh---c--CCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 171 ----ELEK---R--NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 171 ----~l~~---~--~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+... . .++||+|++|.... .+++.. +.+.|+|||++++-
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k~-----------~~~~~~-~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRFR-----------VGCALA-TAFSITRPVTLLFD 153 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSSH-----------HHHHHH-HHHHCSSCEEEEET
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCCc-----------hhHHHH-HHHhcCCCeEEEEe
Confidence 3321 2 26899999997411 255665 56899999999873
No 232
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.82 E-value=5.2e-09 Score=97.92 Aligned_cols=125 Identities=14% Similarity=0.081 Sum_probs=81.7
Q ss_pred EEEEcCee-eccccChhhHHHHHhhhhcccCCCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhh
Q 019550 74 VLVIDGKM-QSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVN 152 (339)
Q Consensus 74 ~L~ldG~~-q~~~~d~~~Y~e~l~~~~l~~~~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~ 152 (339)
.+.++|.. ....+..+...+++....+ ....++|||||||+|.++..++++ +..+|++||+++.+++.+.+.
T Consensus 55 ~I~v~g~~~~yvsrg~~Kl~~~l~~~~~--~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~---- 127 (291)
T 3hp7_A 55 ELKLKGEKLRYVSRGGLKLEKALAVFNL--SVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ---- 127 (291)
T ss_dssp CEEETTCCCCSSSTTHHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT----
T ss_pred EEEEcccccccccchHHHHHHHHHhcCC--CccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh----
Confidence 34556543 2333444444455544332 235679999999999999988885 678999999999999885442
Q ss_pred ccccCCCCeEEEE-ccHHHHHH--hcC-CceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 153 QEAFCSKKLNLVV-NDAKAELE--KRN-EKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 153 ~~~~~~~rv~v~~-~D~~~~l~--~~~-~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
++++.... .|++. +. ..+ ..||+|++|..-.. ...++.. +++.|+|||.+++-
T Consensus 128 -----~~rv~~~~~~ni~~-l~~~~l~~~~fD~v~~d~sf~s---------l~~vL~e-~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 128 -----DDRVRSMEQYNFRY-AEPVDFTEGLPSFASIDVSFIS---------LNLILPA-LAKILVDGGQVVAL 184 (291)
T ss_dssp -----CTTEEEECSCCGGG-CCGGGCTTCCCSEEEECCSSSC---------GGGTHHH-HHHHSCTTCEEEEE
T ss_pred -----CcccceecccCcee-cchhhCCCCCCCEEEEEeeHhh---------HHHHHHH-HHHHcCcCCEEEEE
Confidence 35554432 34332 21 112 34999999876321 1466788 79999999988764
No 233
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.82 E-value=3.6e-09 Score=102.82 Aligned_cols=125 Identities=18% Similarity=0.181 Sum_probs=86.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
+.+.+|||+|||+|.++..++++. +..++++||+|+.+++.| ++++++.+|..++. ..++||+|
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------~~~~~~~~D~~~~~--~~~~fD~I 102 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------PWAEGILADFLLWE--PGEAFDLI 102 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------------TTEEEEESCGGGCC--CSSCEEEE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------------CCCcEEeCChhhcC--ccCCCCEE
Confidence 346799999999999999998754 457999999999998776 46899999987653 24689999
Q ss_pred EecCCCCCCCC---------cc-ccC-------------CcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHH
Q 019550 183 FGDLADPVEGG---------PC-YQL-------------YTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYN 239 (339)
Q Consensus 183 i~D~~d~~~~~---------p~-~~L-------------~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~ 239 (339)
++++|-..... .. ... .-..|++. +.+.|+|||.+++-.... +........+.+
T Consensus 103 i~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~-~~~~Lk~~G~~~~i~p~~--~l~~~~~~~lr~ 179 (421)
T 2ih2_A 103 LGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEK-AVRLLKPGGVLVFVVPAT--WLVLEDFALLRE 179 (421)
T ss_dssp EECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHH-HHHHEEEEEEEEEEEEGG--GGTCGGGHHHHH
T ss_pred EECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHH-HHHHhCCCCEEEEEEChH--HhcCccHHHHHH
Confidence 99987421101 00 000 11267888 789999999887754221 222234456666
Q ss_pred HHHhHCC
Q 019550 240 TIKQVFK 246 (339)
Q Consensus 240 ~l~~~F~ 246 (339)
.+.+...
T Consensus 180 ~l~~~~~ 186 (421)
T 2ih2_A 180 FLAREGK 186 (421)
T ss_dssp HHHHHSE
T ss_pred HHHhcCC
Confidence 6666543
No 234
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.81 E-value=5.7e-08 Score=91.63 Aligned_cols=133 Identities=13% Similarity=0.006 Sum_probs=89.1
Q ss_pred CCCeEEEEecchhHHHHHHHhc-CCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc--CCceeE
Q 019550 105 NPKTVFIMGGGEGSAAREALKH-KSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR--NEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~yDv 181 (339)
+..+|||+|||.|+.+..+++. .+..+|+++|+++..++.+++++...+ -.+++++.+|+.++.... ..+||.
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g----~~~v~~~~~D~~~~~~~~~~~~~fD~ 177 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG----VSCCELAEEDFLAVSPSDPRYHEVHY 177 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCGGGSCTTCGGGTTEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCeEEEEeCChHhcCccccccCCCCE
Confidence 4578999999999999998875 345799999999999999999987653 257999999988754321 157999
Q ss_pred EEecCCCCCCC----Ccc---------ccC-----CcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHh
Q 019550 182 IFGDLADPVEG----GPC---------YQL-----YTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQ 243 (339)
Q Consensus 182 Ii~D~~d~~~~----~p~---------~~L-----~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~ 243 (339)
|++|++-...+ .|- ..+ ...++++. +.+.|+ ||+|+..+.+. .......++..+-+
T Consensus 178 Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~-a~~~l~-gG~lvYsTCs~----~~~Ene~~v~~~l~ 251 (309)
T 2b9e_A 178 ILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCH-ALTFPS-LQRLVYSTCSL----CQEENEDVVRDALQ 251 (309)
T ss_dssp EEECCCCCC------------------CCHHHHHHHHHHHHHH-HTTCTT-CCEEEEEESCC----CGGGTHHHHHHHHT
T ss_pred EEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHH-HHhccC-CCEEEEECCCC----ChHHhHHHHHHHHH
Confidence 99999732110 000 000 01346666 566776 99888765443 22233445555544
Q ss_pred HCCc
Q 019550 244 VFKH 247 (339)
Q Consensus 244 ~F~~ 247 (339)
.++.
T Consensus 252 ~~~~ 255 (309)
T 2b9e_A 252 QNPG 255 (309)
T ss_dssp TSTT
T ss_pred hCCC
Confidence 5554
No 235
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.81 E-value=9.2e-09 Score=100.16 Aligned_cols=103 Identities=15% Similarity=0.212 Sum_probs=73.6
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++. + .++++||+++.+++.|++. ... .....+..+..+.+....++||+|+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~-g-~~v~gvD~s~~~~~~a~~~-~~~------~~~~~~~~~~~~~l~~~~~~fD~I~ 176 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA-G-VRHLGFEPSSGVAAKAREK-GIR------VRTDFFEKATADDVRRTEGPANVIY 176 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT-T-CEEEEECCCHHHHHHHHTT-TCC------EECSCCSHHHHHHHHHHHCCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-C-CcEEEECCCHHHHHHHHHc-CCC------cceeeechhhHhhcccCCCCEEEEE
Confidence 35679999999999999999884 3 5899999999999999987 111 1111222333334444457899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+...-.. -+ -...+++. +++.|+|||++++..
T Consensus 177 ~~~vl~h--~~----d~~~~l~~-~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 177 AANTLCH--IP----YVQSVLEG-VDALLAPDGVFVFED 208 (416)
T ss_dssp EESCGGG--CT----THHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECChHHh--cC----CHHHHHHH-HHHHcCCCeEEEEEe
Confidence 9765211 01 13588999 899999999999864
No 236
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.75 E-value=2.6e-08 Score=104.14 Aligned_cols=107 Identities=19% Similarity=0.186 Sum_probs=79.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhh--ccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVN--QEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~--~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
++.+|||||||+|.++..+++.. +..+|++||+++.+++.|++.+... ......++++++.+|+.+. ....++||+
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL-p~~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF-DSRLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC-CTTSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC-CcccCCeeE
Confidence 57899999999999999999865 4479999999999999999876422 1111246899999998763 233478999
Q ss_pred EEecCCCCCCCCccccCCc---HHHHHHHHccccCCCcEEEEe
Q 019550 182 IFGDLADPVEGGPCYQLYT---KSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t---~ef~~~~~~~~L~~gGilv~~ 221 (339)
|++...- .++.. ..+++. +.+.|+|| .+++.
T Consensus 800 VV~~eVL-------eHL~dp~l~~~L~e-I~RvLKPG-~LIIS 833 (950)
T 3htx_A 800 GTCLEVI-------EHMEEDQACEFGEK-VLSLFHPK-LLIVS 833 (950)
T ss_dssp EEEESCG-------GGSCHHHHHHHHHH-HHHTTCCS-EEEEE
T ss_pred EEEeCch-------hhCChHHHHHHHHH-HHHHcCCC-EEEEE
Confidence 9996431 22222 247888 79999999 55554
No 237
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.73 E-value=9.3e-09 Score=91.09 Aligned_cols=92 Identities=12% Similarity=0.089 Sum_probs=71.6
Q ss_pred CCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEec
Q 019550 106 PKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGD 185 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D 185 (339)
+.+||+||||+|..+..+++. +++|+++.+++.+++. +++++.+|+.+. ....++||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~-~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-----------GVFVLKGTAENL-PLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-----------TCEEEECBTTBC-CSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-----------CCEEEEcccccC-CCCCCCeeEEEEc
Confidence 789999999999999987763 9999999999999876 477888887542 2234689999987
Q ss_pred CCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 186 LADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 186 ~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
..-.. .+ -...+++. +.+.|+|||.+++..
T Consensus 110 ~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 110 TTICF--VD----DPERALKE-AYRILKKGGYLIVGI 139 (219)
T ss_dssp SCGGG--SS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred chHhh--cc----CHHHHHHH-HHHHcCCCcEEEEEE
Confidence 54211 01 12578898 799999999998864
No 238
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.73 E-value=2.2e-09 Score=99.29 Aligned_cols=113 Identities=13% Similarity=0.104 Sum_probs=73.4
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhcccc------------CC--------------
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAF------------CS-------------- 158 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~------------~~-------------- 158 (339)
++.+||+||||+|.+...+++ .+..+|++||+++.+++.|++++......+ ..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSAC-SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGG-GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhc-cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 567999999999995543333 335699999999999999998754210000 00
Q ss_pred CCeEEEEccHHHHHHh-----cCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 159 KKLNLVVNDAKAELEK-----RNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 159 ~rv~v~~~D~~~~l~~-----~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
..++++..|+.+.+.- .+++||+|++...-... .+ ..---..+++. +++.|+|||.|++.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~-~~~~~~~~l~~-~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAV-SP-DLASFQRALDH-ITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHH-CS-SHHHHHHHHHH-HHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhh-cC-CHHHHHHHHHH-HHHhcCCCCEEEEE
Confidence 1256777887653321 13569999998641110 00 00012478888 79999999998875
No 239
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.72 E-value=1e-07 Score=88.33 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=75.2
Q ss_pred CCCeEEEEecch--hHHHHHHH-hcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHH---Hhc--C
Q 019550 105 NPKTVFIMGGGE--GSAAREAL-KHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAEL---EKR--N 176 (339)
Q Consensus 105 ~p~~VL~IG~G~--G~~~~~l~-~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l---~~~--~ 176 (339)
..++|||||||. +....+++ +..|..+|++||+||.|++.||+.+.... ..+++++.+|.++.- ... .
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~----~~~~~~v~aD~~~~~~~l~~~~~~ 153 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP----EGRTAYVEADMLDPASILDAPELR 153 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS----SSEEEEEECCTTCHHHHHTCHHHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC----CCcEEEEEecccChhhhhcccccc
Confidence 467999999996 33334444 34567899999999999999999875321 357999999998752 111 2
Q ss_pred Ccee-----EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 177 EKFD-----VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 177 ~~yD-----vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
+.|| .|+++..-++ -+ ..---...++. +.+.|+|||+|++...
T Consensus 154 ~~~D~~~p~av~~~avLH~--l~-d~~~p~~~l~~-l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 154 DTLDLTRPVALTVIAIVHF--VL-DEDDAVGIVRR-LLEPLPSGSYLAMSIG 201 (277)
T ss_dssp TTCCTTSCCEEEEESCGGG--SC-GGGCHHHHHHH-HHTTSCTTCEEEEEEE
T ss_pred cccCcCCcchHHhhhhHhc--CC-chhhHHHHHHH-HHHhCCCCcEEEEEec
Confidence 4465 4566554222 11 00001368888 7999999999998754
No 240
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.71 E-value=1.6e-08 Score=92.97 Aligned_cols=80 Identities=15% Similarity=0.101 Sum_probs=65.6
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCH-------HHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcC-
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQ-------EVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRN- 176 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~-------~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~- 176 (339)
...+|||+|||+|..+..+++. ..+|+++|+++ .+++.|+++...++. ..+++++.+|+.+++....
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~---~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDT---AARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH---HTTEEEEESCHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCC---ccCeEEEECCHHHHHHhhhc
Confidence 3578999999999999999884 36899999999 999999988765432 2579999999999876433
Q ss_pred --CceeEEEecCCCC
Q 019550 177 --EKFDVIFGDLADP 189 (339)
Q Consensus 177 --~~yDvIi~D~~d~ 189 (339)
++||+|++|++-+
T Consensus 158 ~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHCCCSEEEECCCC-
T ss_pred cCCCccEEEECCCCC
Confidence 6899999998644
No 241
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.69 E-value=3.1e-08 Score=94.39 Aligned_cols=103 Identities=18% Similarity=0.113 Sum_probs=74.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
++..+|||||||+|..+..+++..+..+++++|+ +.++. ++...... ..+|++++.+|..+ ..+ .||+|+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~---~~~~v~~~~~d~~~---~~p-~~D~v~ 252 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPD---VAGRWKVVEGDFLR---EVP-HADVHV 252 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGG---GTTSEEEEECCTTT---CCC-CCSEEE
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccC---CCCCeEEEecCCCC---CCC-CCcEEE
Confidence 4567999999999999999998878889999999 56655 44333221 15789999999852 223 899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-.. -+ .-....+++. +++.|+|||.+++.
T Consensus 253 ~~~vlh~--~~--d~~~~~~L~~-~~~~LkpgG~l~i~ 285 (348)
T 3lst_A 253 LKRILHN--WG--DEDSVRILTN-CRRVMPAHGRVLVI 285 (348)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHTCCTTCEEEEE
T ss_pred EehhccC--CC--HHHHHHHHHH-HHHhcCCCCEEEEE
Confidence 8754211 00 0011478999 79999999998775
No 242
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.68 E-value=2.3e-08 Score=90.40 Aligned_cols=110 Identities=15% Similarity=0.086 Sum_probs=72.6
Q ss_pred hHHHHHhhhhcccCCCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHH
Q 019550 90 IYHECLIHPPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAK 169 (339)
Q Consensus 90 ~Y~e~l~~~~l~~~~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~ 169 (339)
...+++..... .+..++|||||||+|.++..+++. +..+|++||+++.+++.+++.. +++......-.
T Consensus 24 kL~~~L~~~~~--~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~---------~~~~~~~~~~~ 91 (232)
T 3opn_A 24 KLEKALKEFHL--EINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSD---------ERVVVMEQFNF 91 (232)
T ss_dssp HHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTC---------TTEEEECSCCG
T ss_pred HHHHHHHHcCC--CCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhC---------ccccccccceE
Confidence 33444543332 245679999999999999999985 5569999999999999987753 33332221111
Q ss_pred HHHH--hcCC-ceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 170 AELE--KRNE-KFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 170 ~~l~--~~~~-~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
.++. .... .||.+..|..-.. + ..+++. +++.|+|||.+++-
T Consensus 92 ~~~~~~~~~~~~~d~~~~D~v~~~-------l--~~~l~~-i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 92 RNAVLADFEQGRPSFTSIDVSFIS-------L--DLILPP-LYEILEKNGEVAAL 136 (232)
T ss_dssp GGCCGGGCCSCCCSEEEECCSSSC-------G--GGTHHH-HHHHSCTTCEEEEE
T ss_pred EEeCHhHcCcCCCCEEEEEEEhhh-------H--HHHHHH-HHHhccCCCEEEEE
Confidence 2221 1122 3787777765221 1 467888 79999999988874
No 243
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.68 E-value=3.5e-08 Score=94.48 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=79.1
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
..++|||||||.|..+..+++.+|..++++.|+ |.|++.++++..... .+|++++.+|.++ .....+|+|++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~----~~rv~~~~gD~~~---~~~~~~D~~~~ 250 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE----EEQIDFQEGDFFK---DPLPEADLYIL 250 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTTT---SCCCCCSEEEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc----cCceeeecCcccc---CCCCCceEEEe
Confidence 457899999999999999999888889999998 999999999876432 5899999999753 34467899988
Q ss_pred cCCC-CCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 185 DLAD-PVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 185 D~~d-~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
-..- .+ .. . .....++. +++.|+|||.+++.
T Consensus 251 ~~vlh~~--~d-~--~~~~iL~~-~~~al~pgg~lli~ 282 (353)
T 4a6d_A 251 ARVLHDW--AD-G--KCSHLLER-IYHTCKPGGGILVI 282 (353)
T ss_dssp ESSGGGS--CH-H--HHHHHHHH-HHHHCCTTCEEEEE
T ss_pred eeecccC--CH-H--HHHHHHHH-HHhhCCCCCEEEEE
Confidence 6531 11 00 0 12467898 79999999977664
No 244
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.67 E-value=1.9e-08 Score=94.72 Aligned_cols=127 Identities=11% Similarity=0.027 Sum_probs=83.4
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEc----CHHHHHHHHHhhhhhccccCCCCeEEEEc-cHHHHHHhcCCce
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDI----DQEVVDFCRRFLTVNQEAFCSKKLNLVVN-DAKAELEKRNEKF 179 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEi----d~~vi~~ar~~f~~~~~~~~~~rv~v~~~-D~~~~l~~~~~~y 179 (339)
+..+|||||||+|+.+..+++. .+|++||+ ++..++.. .. .....++++++.+ |+... ..++|
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~----~~--~~~~~~~v~~~~~~D~~~l---~~~~f 149 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPI----PM--STYGWNLVRLQSGVDVFFI---PPERC 149 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCC----CC--CSTTGGGEEEECSCCTTTS---CCCCC
T ss_pred CCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHH----Hh--hhcCCCCeEEEeccccccC---CcCCC
Confidence 4579999999999999998885 47999999 44332211 11 0111367999998 87643 24689
Q ss_pred eEEEecCCCCCCCCcc--ccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEE
Q 019550 180 DVIFGDLADPVEGGPC--YQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVA 250 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~--~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~ 250 (339)
|+|++|..... +.. ...-+...++. +.+.|+|||.+++..-.+ .......+...++..|..+..
T Consensus 150 D~V~sd~~~~~--g~~~~d~~~~l~~L~~-~~~~LkpGG~~v~kv~~~----~~~~~~~~l~~l~~~f~~v~~ 215 (305)
T 2p41_A 150 DTLLCDIGESS--PNPTVEAGRTLRVLNL-VENWLSNNTQFCVKVLNP----YMSSVIEKMEALQRKHGGALV 215 (305)
T ss_dssp SEEEECCCCCC--SSHHHHHHHHHHHHHH-HHHHCCTTCEEEEEESCC----CSHHHHHHHHHHHHHHCCEEE
T ss_pred CEEEECCcccc--CcchhhHHHHHHHHHH-HHHHhCCCCEEEEEeCCC----CCchHHHHHHHHHHHcCCEEE
Confidence 99999976321 110 00001146776 689999999999875332 112345677788888988764
No 245
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.67 E-value=2.9e-08 Score=96.98 Aligned_cols=79 Identities=19% Similarity=0.175 Sum_probs=65.8
Q ss_pred CCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-CCceeEEEe
Q 019550 106 PKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-NEKFDVIFG 184 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~yDvIi~ 184 (339)
.++|||+|||.|..+..+++. ..+|++||+|+.+++.|++++...... -.+++++.+|+.+++... .++||+|++
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~g--l~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNE--GKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCT--TCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccC--CCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 689999999999999988874 469999999999999999998754101 267999999999987652 357999999
Q ss_pred cCCC
Q 019550 185 DLAD 188 (339)
Q Consensus 185 D~~d 188 (339)
|++-
T Consensus 170 DPPr 173 (410)
T 3ll7_A 170 DPAR 173 (410)
T ss_dssp CCEE
T ss_pred CCCC
Confidence 9973
No 246
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.66 E-value=9.5e-09 Score=95.45 Aligned_cols=133 Identities=14% Similarity=-0.018 Sum_probs=85.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEE--EccHHHHHHhcCCceeE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLV--VNDAKAELEKRNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~--~~D~~~~l~~~~~~yDv 181 (339)
.+..+|||||||+|..+..+++. .+|++||+++ ++..+++. +..... ...+++++ .+|+.++ ..++||+
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~-~~~~~~-~~~~v~~~~~~~D~~~l---~~~~fD~ 151 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEK-PRLVET-FGWNLITFKSKVDVTKM---EPFQADT 151 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCC-CCCCCC-TTGGGEEEECSCCGGGC---CCCCCSE
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhc-hhhhhh-cCCCeEEEeccCcHhhC---CCCCcCE
Confidence 34578999999999999998885 5799999999 53333221 111000 01278899 8998762 2578999
Q ss_pred EEecCCCCCCCCcc-ccCCcHHHHHHHHccccCCCc--EEEEecCCCCccCchhhHHHHHHHHHhHCCceEEE
Q 019550 182 IFGDLADPVEGGPC-YQLYTKSFYERILKPKLNDNG--IFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAY 251 (339)
Q Consensus 182 Ii~D~~d~~~~~p~-~~L~t~ef~~~~~~~~L~~gG--ilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~ 251 (339)
|++|.. .....+. ...-+..+++. +.+.|+||| .+++..-.|. .......++.++..|..+..+
T Consensus 152 Vvsd~~-~~~~~~~~d~~~~l~~L~~-~~r~LkpGG~~~~v~~~~~~~----~~~~~~~l~~l~~~f~~v~v~ 218 (276)
T 2wa2_A 152 VLCDIG-ESNPTAAVEASRTLTVLNV-ISRWLEYNQGCGFCVKVLNPY----SCDVLEALMKMQARFGGGLIR 218 (276)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHH-HHHHHHHSTTCEEEEEESCCC----SHHHHHHHHHHHHHHCCEEEC
T ss_pred EEECCC-cCCCchhhhHHHHHHHHHH-HHHHhccCCCcEEEEEeCCCC----chhHHHHHHHHHHHcCCEEEE
Confidence 999976 3210110 00001136777 788999999 9888653331 122345667788888877653
No 247
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.66 E-value=2.1e-08 Score=92.11 Aligned_cols=104 Identities=22% Similarity=0.146 Sum_probs=79.1
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+.|.+|||||||.|-++..+....+..+++++|||+.+++++++++..+ ..+.++...|... ...+++||+|+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~-----g~~~~~~v~D~~~--~~p~~~~DvaL 203 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL-----NVPHRTNVADLLE--DRLDEPADVTL 203 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT-----TCCEEEEECCTTT--SCCCSCCSEEE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeeecc--cCCCCCcchHH
Confidence 5689999999999999998888778899999999999999999999776 3568889988642 23468899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
+...-|.- ..--....|+ +.+.|+++|+++-
T Consensus 204 ~lkti~~L----e~q~kg~g~~--ll~aL~~~~vvVS 234 (281)
T 3lcv_B 204 LLKTLPCL----ETQQRGSGWE--VIDIVNSPNIVVT 234 (281)
T ss_dssp ETTCHHHH----HHHSTTHHHH--HHHHSSCSEEEEE
T ss_pred HHHHHHHh----hhhhhHHHHH--HHHHhCCCCEEEe
Confidence 88762210 0000113453 4678999999874
No 248
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.66 E-value=7.8e-08 Score=90.36 Aligned_cols=78 Identities=27% Similarity=0.341 Sum_probs=65.1
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH---HHhcC-Ccee
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE---LEKRN-EKFD 180 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~---l~~~~-~~yD 180 (339)
+..+|||+|||+|+.+.++++..+..+|++||+|+.+++.|++++... .++++++++|+.+. +.... .+||
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~-----g~~v~~v~~d~~~l~~~l~~~g~~~~D 100 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF-----SDRVSLFKVSYREADFLLKTLGIEKVD 100 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG-----TTTEEEEECCGGGHHHHHHHTTCSCEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEECCHHHHHHHHHhcCCCCCC
Confidence 457899999999999999998766689999999999999999997654 26899999998764 22222 5799
Q ss_pred EEEecCC
Q 019550 181 VIFGDLA 187 (339)
Q Consensus 181 vIi~D~~ 187 (339)
.|++|++
T Consensus 101 ~Vl~D~g 107 (301)
T 1m6y_A 101 GILMDLG 107 (301)
T ss_dssp EEEEECS
T ss_pred EEEEcCc
Confidence 9999985
No 249
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.63 E-value=1.2e-08 Score=94.09 Aligned_cols=133 Identities=14% Similarity=-0.013 Sum_probs=84.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEE--EccHHHHHHhcCCceeE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLV--VNDAKAELEKRNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~--~~D~~~~l~~~~~~yDv 181 (339)
.+..+|||||||+|+.+..+++. .+|++||+++ ++..+++. +..... ...++.++ .+|+.++ ..++||+
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~-~~~~~~-~~~~v~~~~~~~D~~~l---~~~~fD~ 143 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV-PRITES-YGWNIVKFKSRVDIHTL---PVERTDV 143 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC-CCCCCB-TTGGGEEEECSCCTTTS---CCCCCSE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh-hhhhhc-cCCCeEEEecccCHhHC---CCCCCcE
Confidence 34578999999999999988885 5799999999 43222211 111000 01268888 8898763 2578999
Q ss_pred EEecCCCCCCCCcc-ccCCcHHHHHHHHccccCCCc--EEEEecCCCCccCchhhHHHHHHHHHhHCCceEEE
Q 019550 182 IFGDLADPVEGGPC-YQLYTKSFYERILKPKLNDNG--IFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAY 251 (339)
Q Consensus 182 Ii~D~~d~~~~~p~-~~L~t~ef~~~~~~~~L~~gG--ilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~ 251 (339)
|++|.. .....+. ...-+..+++. +.+.|+||| .+++..-.|. .......+..+++.|..+...
T Consensus 144 V~sd~~-~~~~~~~~d~~~~l~~L~~-~~r~LkpGG~~~fv~kv~~~~----~~~~~~~l~~l~~~f~~v~~~ 210 (265)
T 2oxt_A 144 IMCDVG-ESSPKWSVESERTIKILEL-LEKWKVKNPSADFVVKVLCPY----SVEVMERLSVMQRKWGGGLVR 210 (265)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHH-HHHHHHHCTTCEEEEEESCTT----SHHHHHHHHHHHHHHCCEEEC
T ss_pred EEEeCc-ccCCccchhHHHHHHHHHH-HHHHhccCCCeEEEEEeCCCC----ChhHHHHHHHHHHHcCCEEEE
Confidence 999976 2210110 00001136777 789999999 9988653331 122336677888888877653
No 250
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.62 E-value=8.3e-08 Score=93.16 Aligned_cols=110 Identities=12% Similarity=-0.016 Sum_probs=78.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCC--------------------------------------CEEEEEEcCHHHHHHHH
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSL--------------------------------------EKVVMCDIDQEVVDFCR 146 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~--------------------------------------~~v~~VEid~~vi~~ar 146 (339)
....+||.+||+|+++.+++..... .+|+++|+|+.+++.|+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 4568999999999999998863221 46999999999999999
Q ss_pred HhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCC--CcEEEEec
Q 019550 147 RFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLND--NGIFVTQA 222 (339)
Q Consensus 147 ~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~--gGilv~~~ 222 (339)
++....+. ..+++++.+|+.++. ..++||+|++|+|-....+. .--..++|+. +.+.|++ ||.+.+-+
T Consensus 274 ~Na~~~gl---~~~I~~~~~D~~~l~--~~~~fD~Iv~NPPYG~rl~~--~~~l~~ly~~-lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 274 KNAREVGL---EDVVKLKQMRLQDFK--TNKINGVLISNPPYGERLLD--DKAVDILYNE-MGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHTTC---TTTEEEEECCGGGCC--CCCCSCEEEECCCCTTTTSC--HHHHHHHHHH-HHHHHTTCTTSEEEEEE
T ss_pred HHHHHcCC---CCceEEEECChHHCC--ccCCcCEEEECCchhhccCC--HHHHHHHHHH-HHHHHhhCCCcEEEEEE
Confidence 99876542 357999999988753 23589999999985432111 0112456766 5555655 88766544
No 251
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.60 E-value=3.8e-08 Score=94.58 Aligned_cols=98 Identities=17% Similarity=0.161 Sum_probs=74.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+|||||||+|..+..+++..+..+++++|+ |.+++.++++ ++++++.+|..+. .+. ||+|+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~~~-~D~v~ 272 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----------SGIEHVGGDMFAS---VPQ-GDAMI 272 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTC---CCC-EEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----------CCCEEEeCCcccC---CCC-CCEEE
Confidence 4568999999999999999998777788999999 9999877642 5799999998652 233 99999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-.. -+ ......+++. +++.|+|||.+++.
T Consensus 273 ~~~~lh~--~~--d~~~~~~l~~-~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 273 LKAVCHN--WS--DEKCIEFLSN-CHKALSPNGKVIIV 305 (372)
T ss_dssp EESSGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEE
T ss_pred Eeccccc--CC--HHHHHHHHHH-HHHhcCCCCEEEEE
Confidence 8654211 01 0011278999 79999999988765
No 252
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.60 E-value=1.2e-07 Score=88.20 Aligned_cols=77 Identities=23% Similarity=0.358 Sum_probs=62.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++. ..+|++||+|+.+++.+++.+..... .++++++.+|+.+. .-..||+|+
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~v~~~~~D~~~~---~~~~fD~vv 98 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTPV---ASKLQVLVGDVLKT---DLPFFDTCV 98 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTSTT---GGGEEEEESCTTTS---CCCCCSEEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcCC---CCceEEEEcceecc---cchhhcEEE
Confidence 35678999999999999999985 36899999999999999998753311 26899999998653 224799999
Q ss_pred ecCCC
Q 019550 184 GDLAD 188 (339)
Q Consensus 184 ~D~~d 188 (339)
++++-
T Consensus 99 ~nlpy 103 (285)
T 1zq9_A 99 ANLPY 103 (285)
T ss_dssp EECCG
T ss_pred EecCc
Confidence 98763
No 253
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.60 E-value=5.4e-08 Score=92.76 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=74.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+++.+|||||||+|..+..+++..|..+++++|+ |.+++.++++ ++++++.+|..+. .+ .||+|+
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~p-~~D~v~ 251 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------NNLTYVGGDMFTS---IP-NADAVL 251 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------TTEEEEECCTTTC---CC-CCSEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------CCcEEEeccccCC---CC-CccEEE
Confidence 3568999999999999999998777789999999 9999887652 4599999998642 22 499999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCC---CcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLND---NGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~---gGilv~~ 221 (339)
+...-.. -+ ..-...+++. +++.|+| ||.+++.
T Consensus 252 ~~~~lh~--~~--d~~~~~~l~~-~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 252 LKYILHN--WT--DKDCLRILKK-CKEAVTNDGKRGKVTII 287 (352)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHHSGGGCCCEEEEE
T ss_pred eehhhcc--CC--HHHHHHHHHH-HHHhCCCCCCCcEEEEE
Confidence 8654211 00 0011278898 7999999 9988765
No 254
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.60 E-value=1.9e-07 Score=87.23 Aligned_cols=119 Identities=15% Similarity=0.198 Sum_probs=75.7
Q ss_pred CCCCeEEEEec------chhHHHHHHHhcCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEE-EEccHHHHHHhc
Q 019550 104 QNPKTVFIMGG------GEGSAAREALKHKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNL-VVNDAKAELEKR 175 (339)
Q Consensus 104 ~~p~~VL~IG~------G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v-~~~D~~~~l~~~ 175 (339)
++..+|||||| |.|+ ..+++..+ ..+|++||+++. + +++++ +.+|+.+.- .
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---------~~v~~~i~gD~~~~~--~ 120 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---------SDADSTLIGDCATVH--T 120 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---------CSSSEEEESCGGGCC--C
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---------CCCEEEEECccccCC--c
Confidence 45679999999 5577 33344334 579999999998 1 35778 999986531 2
Q ss_pred CCceeEEEecCCCCCCC----Ccccc-CCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH-CCceE
Q 019550 176 NEKFDVIFGDLADPVEG----GPCYQ-LYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV-FKHVV 249 (339)
Q Consensus 176 ~~~yDvIi~D~~d~~~~----~p~~~-L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~-F~~v~ 249 (339)
.++||+|++|...+... ..... -+-.+.++. +.+.|+|||.+++..-. . .....+.+.+++. |..+.
T Consensus 121 ~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~-a~r~LkpGG~~v~~~~~-----~-~~~~~l~~~l~~~GF~~v~ 193 (290)
T 2xyq_A 121 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGF-IKQKLALGGSIAVKITE-----H-SWNADLYKLMGHFSWWTAF 193 (290)
T ss_dssp SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHH-HHHHEEEEEEEEEEECS-----S-SCCHHHHHHHTTEEEEEEE
T ss_pred cCcccEEEEcCCccccccccccccchHHHHHHHHHH-HHHhcCCCcEEEEEEec-----c-CCHHHHHHHHHHcCCcEEE
Confidence 36799999997533210 00000 112467887 79999999999985421 1 1123566667766 66554
Q ss_pred E
Q 019550 250 A 250 (339)
Q Consensus 250 ~ 250 (339)
.
T Consensus 194 ~ 194 (290)
T 2xyq_A 194 V 194 (290)
T ss_dssp E
T ss_pred E
Confidence 4
No 255
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.60 E-value=5.4e-08 Score=94.77 Aligned_cols=110 Identities=8% Similarity=0.055 Sum_probs=77.2
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCC--------------------------------------CEEEEEEcCHHHHHHHH
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSL--------------------------------------EKVVMCDIDQEVVDFCR 146 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~--------------------------------------~~v~~VEid~~vi~~ar 146 (339)
....|||.+||+|+++.+++..... .+|+++|+|+.+++.|+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 4568999999999999988864221 46999999999999999
Q ss_pred HhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCC--CcEEEEec
Q 019550 147 RFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLND--NGIFVTQA 222 (339)
Q Consensus 147 ~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~--gGilv~~~ 222 (339)
++....+. ..+++++.+|+.+.. ..++||+|++|+|-....+. .-...++|+. +.+.|++ ||.+.+-+
T Consensus 281 ~Na~~~gl---~~~I~~~~~D~~~~~--~~~~fD~Iv~NPPYg~rl~~--~~~l~~ly~~-lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 281 QNAVEAGL---GDLITFRQLQVADFQ--TEDEYGVVVANPPYGERLED--EEAVRQLYRE-MGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHTTC---TTCSEEEECCGGGCC--CCCCSCEEEECCCCCCSHHH--HHHHHHHHHH-HHHHHHTCTTCEEEEEE
T ss_pred HHHHHcCC---CCceEEEECChHhCC--CCCCCCEEEECCCCccccCC--chhHHHHHHH-HHHHHhcCCCCEEEEEE
Confidence 99876542 357999999987753 24689999999985321110 0012345665 4555544 77666543
No 256
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.59 E-value=3.9e-07 Score=84.44 Aligned_cols=151 Identities=15% Similarity=0.217 Sum_probs=105.2
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc---CCceeE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR---NEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~---~~~yDv 181 (339)
++..+|++-+|+|.++.++++ +..+++.||++++.++..++++.. +++++++..|+...|... .++||+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHF------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCT------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred cCCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCc------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 467799999999999999998 458999999999999999999864 478999999999998753 357999
Q ss_pred EEecCCCCCCCCccccCCc--HHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeec-cc
Q 019550 182 IFGDLADPVEGGPCYQLYT--KSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVP-SF 258 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t--~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP-~~ 258 (339)
|++||+-... ..+. .+.+.. ...+.++|+++++.. ....+....+.+.|++.-..+......+. .-
T Consensus 163 VfiDPPYe~k-----~~~~~vl~~L~~--~~~r~~~Gi~v~WYP----i~~~~~~~~~~~~l~~~~~~~l~~el~~~~~~ 231 (283)
T 2oo3_A 163 IFIDPSYERK-----EEYKEIPYAIKN--AYSKFSTGLYCVWYP----VVNKAWTEQFLRKMREISSKSVRIELHLNPLI 231 (283)
T ss_dssp EEECCCCCST-----THHHHHHHHHHH--HHHHCTTSEEEEEEE----ESSHHHHHHHHHHHHHHCSSEEEEEEECCCSS
T ss_pred EEECCCCCCC-----cHHHHHHHHHHH--hCccCCCeEEEEEEe----ccchHHHHHHHHHHHhcCCCeEEEEEEecCCC
Confidence 9999974320 1111 122232 247889999999852 34566677888888765543333233332 11
Q ss_pred -CCceeE-EEEecCCCCC
Q 019550 259 -ADTWGW-VMASDQPFSI 274 (339)
Q Consensus 259 -~~~~~~-~~as~~p~~~ 274 (339)
.+..+- ++.-+.|..+
T Consensus 232 ~~gm~gsGm~viNpP~~l 249 (283)
T 2oo3_A 232 NEGMTGCGLWIINPPYTF 249 (283)
T ss_dssp CCSCCEEEEEEESCCTTH
T ss_pred CCCcCceeEEEECCchhH
Confidence 233332 4556777643
No 257
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.59 E-value=3e-08 Score=95.43 Aligned_cols=98 Identities=15% Similarity=0.126 Sum_probs=74.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
....+|||||||+|..+..+++..|..+++++|+ |.+++.+++ .++++++.+|..+. .+.. |+|+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~---~p~~-D~v~ 266 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA----------FSGVEHLGGDMFDG---VPKG-DAIF 266 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTC---CCCC-SEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh----------cCCCEEEecCCCCC---CCCC-CEEE
Confidence 3467999999999999999998888889999999 999887653 26899999998652 2233 9998
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-... .. -....+++. +++.|+|||.+++.
T Consensus 267 ~~~vlh~~-~~---~~~~~~l~~-~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 267 IKWICHDW-SD---EHCLKLLKN-CYAALPDHGKVIVA 299 (368)
T ss_dssp EESCGGGB-CH---HHHHHHHHH-HHHHSCTTCEEEEE
T ss_pred EechhhcC-CH---HHHHHHHHH-HHHHcCCCCEEEEE
Confidence 86642110 00 012367898 79999999988775
No 258
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.58 E-value=3.8e-08 Score=94.57 Aligned_cols=98 Identities=18% Similarity=0.109 Sum_probs=74.1
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
....+|||||||+|..+..+++..|..+++++|+ |.+++.+++ .++++++.+|..+. .+.. |+|+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~D~~~~---~p~~-D~v~ 264 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----------FPGVTHVGGDMFKE---VPSG-DTIL 264 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTC---CCCC-SEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----------cCCeEEEeCCcCCC---CCCC-CEEE
Confidence 3467999999999999999998888889999999 999887654 26899999998652 2233 9998
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+...-... .. . -...+++. +++.|+|||.+++.
T Consensus 265 ~~~vlh~~-~d-~--~~~~~L~~-~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 265 MKWILHDW-SD-Q--HCATLLKN-CYDALPAHGKVVLV 297 (364)
T ss_dssp EESCGGGS-CH-H--HHHHHHHH-HHHHSCTTCEEEEE
T ss_pred ehHHhccC-CH-H--HHHHHHHH-HHHHcCCCCEEEEE
Confidence 86542110 00 0 12367898 79999999988775
No 259
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.57 E-value=4.6e-08 Score=94.96 Aligned_cols=110 Identities=18% Similarity=0.143 Sum_probs=77.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcCC--------------------------------------CCEEEEEEcCHHHHHHHH
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKS--------------------------------------LEKVVMCDIDQEVVDFCR 146 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~--------------------------------------~~~v~~VEid~~vi~~ar 146 (339)
...+|||+|||+|+++.+++.... ..+|+++|+|+.+++.|+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 456899999999999999876421 147999999999999999
Q ss_pred HhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCC--CcEEEEec
Q 019550 147 RFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLND--NGIFVTQA 222 (339)
Q Consensus 147 ~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~--gGilv~~~ 222 (339)
++...++. +.++++..+|+.++. .+++||+|++|++-....+. .-...++|+. +.+.|++ ||.+.+-+
T Consensus 275 ~Na~~~gl---~~~i~~~~~D~~~l~--~~~~~D~Iv~NPPyg~rl~~--~~~l~~ly~~-lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 275 ENAEIAGV---DEYIEFNVGDATQFK--SEDEFGFIITNPPYGERLED--KDSVKQLYKE-LGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHHTC---GGGEEEEECCGGGCC--CSCBSCEEEECCCCCCSHHH--HHHHHHHHHH-HHHHHHTSBSCEEEEEE
T ss_pred HHHHHcCC---CCceEEEECChhhcC--cCCCCcEEEECCCCcCccCC--HHHHHHHHHH-HHHHHhhCCCCEEEEEE
Confidence 99876542 347999999988753 24689999999984321110 0012356666 5555655 77665543
No 260
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.56 E-value=1.1e-07 Score=88.29 Aligned_cols=112 Identities=18% Similarity=0.181 Sum_probs=74.1
Q ss_pred CCCeEEEEecchhH----HHHHHHhcCC----CCEEEEEEcCHHHHHHHHHhhh-hh-----------------c---c-
Q 019550 105 NPKTVFIMGGGEGS----AAREALKHKS----LEKVVMCDIDQEVVDFCRRFLT-VN-----------------Q---E- 154 (339)
Q Consensus 105 ~p~~VL~IG~G~G~----~~~~l~~~~~----~~~v~~VEid~~vi~~ar~~f~-~~-----------------~---~- 154 (339)
++.+||++|||+|. ++..+++..+ ..+|+++|||+++++.|++..- .. . .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45789999999998 5655555422 3589999999999999998641 00 0 0
Q ss_pred cc--C---CCCeEEEEccHHHHHHhc-CCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 155 AF--C---SKKLNLVVNDAKAELEKR-NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 155 ~~--~---~~rv~v~~~D~~~~l~~~-~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
.+ . ..++++...|..+. .-. .++||+|++-..-.. ..+ -.....++. +++.|+|||.|++-.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~-~~~~~~~fDlI~crnvliy-f~~---~~~~~vl~~-~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK-QYNVPGPFDAIFCRNVMIY-FDK---TTQEDILRR-FVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS-SCCCCCCEEEEEECSSGGG-SCH---HHHHHHHHH-HGGGEEEEEEEEECT
T ss_pred ceeechhhcccCeEEecccCCC-CCCcCCCeeEEEECCchHh-CCH---HHHHHHHHH-HHHHhCCCcEEEEEe
Confidence 00 0 13789999997651 111 368999999432100 000 012577888 799999999999843
No 261
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.56 E-value=8.9e-08 Score=89.74 Aligned_cols=75 Identities=19% Similarity=0.333 Sum_probs=62.4
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++. ..+|++||+|+.+++.+++.+.. .++++++.+|+.++- -....||+|+
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~------~~~v~vi~gD~l~~~-~~~~~fD~Iv 119 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL------YNNIEIIWGDALKVD-LNKLDFNKVV 119 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH------CSSEEEEESCTTTSC-GGGSCCSEEE
T ss_pred CCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc------CCCeEEEECchhhCC-cccCCccEEE
Confidence 34678999999999999999985 47999999999999999998762 478999999987641 1224699999
Q ss_pred ecCC
Q 019550 184 GDLA 187 (339)
Q Consensus 184 ~D~~ 187 (339)
.+++
T Consensus 120 ~NlP 123 (295)
T 3gru_A 120 ANLP 123 (295)
T ss_dssp EECC
T ss_pred EeCc
Confidence 9976
No 262
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.55 E-value=6.1e-08 Score=89.14 Aligned_cols=82 Identities=17% Similarity=0.120 Sum_probs=66.1
Q ss_pred CeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhcc--ccC---CCCeEEEEccHHHHHHhcCCceeE
Q 019550 107 KTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQE--AFC---SKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 107 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~--~~~---~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
.+|||+|||.|..+.++++. + .+|++||+++.+.+++++.+..... ..+ ..+++++.+|+.++++...++||+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~-g-~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDv 167 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV-G-CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQV 167 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH-T-CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSE
T ss_pred CEEEEcCCcCCHHHHHHHHc-C-CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCE
Confidence 78999999999999999985 4 4799999999998888887753210 111 157999999999998766568999
Q ss_pred EEecCCCCC
Q 019550 182 IFGDLADPV 190 (339)
Q Consensus 182 Ii~D~~d~~ 190 (339)
|++|++-+.
T Consensus 168 V~lDP~y~~ 176 (258)
T 2oyr_A 168 VYLDPMFPH 176 (258)
T ss_dssp EEECCCCCC
T ss_pred EEEcCCCCC
Confidence 999997553
No 263
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.55 E-value=1.9e-07 Score=95.01 Aligned_cols=77 Identities=19% Similarity=0.288 Sum_probs=64.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-CCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-NEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~yDvI 182 (339)
..|.+|||||||+|.++..+++. + .+|++||+++.+|++||.+....+ .-++++.++|+.+..... +++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~-g-a~V~giD~~~~~i~~a~~~a~~~~----~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK-G-ATIVGIDFQQENINVCRALAEENP----DFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTST----TSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhC-C-CEEEEECCCHHHHHHHHHHHHhcC----CCceEEEECCHHHHhhhccCCCccEE
Confidence 46789999999999999999984 4 689999999999999999976542 246899999998876553 5789999
Q ss_pred EecC
Q 019550 183 FGDL 186 (339)
Q Consensus 183 i~D~ 186 (339)
++--
T Consensus 139 ~~~e 142 (569)
T 4azs_A 139 IGLS 142 (569)
T ss_dssp EEES
T ss_pred EECc
Confidence 9864
No 264
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.54 E-value=1.2e-07 Score=86.91 Aligned_cols=75 Identities=21% Similarity=0.418 Sum_probs=61.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH-HHhc--CCcee
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE-LEKR--NEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~-l~~~--~~~yD 180 (339)
.+..+||+||||+|.++..+++. ..+|++||+|+.+++.+++.+.. .++++++.+|+.++ +... .++||
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~~~~ 99 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQ------QKNITIYQNDALQFDFSSVKTDKPLR 99 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTT------CTTEEEEESCTTTCCGGGSCCSSCEE
T ss_pred CCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhh------CCCcEEEEcchHhCCHHHhccCCCeE
Confidence 34678999999999999999884 37999999999999999998753 36899999999875 3332 35688
Q ss_pred EEEecCC
Q 019550 181 VIFGDLA 187 (339)
Q Consensus 181 vIi~D~~ 187 (339)
|+.+++
T Consensus 100 -vv~NlP 105 (255)
T 3tqs_A 100 -VVGNLP 105 (255)
T ss_dssp -EEEECC
T ss_pred -EEecCC
Confidence 888876
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.53 E-value=1.6e-07 Score=87.02 Aligned_cols=96 Identities=21% Similarity=0.198 Sum_probs=70.8
Q ss_pred eEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecCC
Q 019550 108 TVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLA 187 (339)
Q Consensus 108 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~ 187 (339)
+||+||||+|.++..+++. + .+|++||+|+.+++.+++.+. +.+++++.+|+.++--.....+|.|+.+++
T Consensus 49 ~VLEIG~G~G~lt~~L~~~-~-~~V~avEid~~~~~~l~~~~~-------~~~v~vi~~D~l~~~~~~~~~~~~iv~NlP 119 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEA-G-AEVTAIEKDLRLRPVLEETLS-------GLPVRLVFQDALLYPWEEVPQGSLLVANLP 119 (271)
T ss_dssp CEEEECCTTSHHHHHHHHT-T-CCEEEEESCGGGHHHHHHHTT-------TSSEEEEESCGGGSCGGGSCTTEEEEEEEC
T ss_pred eEEEEeCchHHHHHHHHHc-C-CEEEEEECCHHHHHHHHHhcC-------CCCEEEEECChhhCChhhccCccEEEecCc
Confidence 9999999999999999985 3 689999999999999999865 258999999997752111236899999987
Q ss_pred CCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 188 DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 188 d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
-.. .+.-.++. +....-+.+++++|
T Consensus 120 y~i--------ss~il~~l-l~~~~~~~~~lm~Q 144 (271)
T 3fut_A 120 YHI--------ATPLVTRL-LKTGRFARLVFLVQ 144 (271)
T ss_dssp SSC--------CHHHHHHH-HHHCCEEEEEEEEE
T ss_pred ccc--------cHHHHHHH-hcCCCCCEEEEEee
Confidence 433 13334443 43312236677777
No 266
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.52 E-value=1e-07 Score=86.60 Aligned_cols=101 Identities=20% Similarity=0.173 Sum_probs=75.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+.|.+|||||||.|-++..+. +..+++++|||+.+++.+++++... .+++++...|... ...+++||+|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~-----g~~~~~~v~D~~~--~~~~~~~DvvL 173 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK-----DWDFTFALQDVLC--APPAEAGDLAL 173 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT-----TCEEEEEECCTTT--SCCCCBCSEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeeccc--CCCCCCcchHH
Confidence 568999999999999998765 6789999999999999999997765 4788999999643 22457899998
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
+...-+. ..+.-....++ +-+.|+++|+++.
T Consensus 174 llk~lh~----LE~q~~~~~~~--ll~aL~~~~vvVs 204 (253)
T 3frh_A 174 IFKLLPL----LEREQAGSAMA--LLQSLNTPRMAVS 204 (253)
T ss_dssp EESCHHH----HHHHSTTHHHH--HHHHCBCSEEEEE
T ss_pred HHHHHHH----hhhhchhhHHH--HHHHhcCCCEEEE
Confidence 8754111 00111124454 3468999998874
No 267
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.51 E-value=6.2e-08 Score=95.64 Aligned_cols=111 Identities=15% Similarity=0.082 Sum_probs=79.3
Q ss_pred CCeEEEEecchhHHHHHHHhcC-------------CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHH
Q 019550 106 PKTVFIMGGGEGSAAREALKHK-------------SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAEL 172 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~-------------~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l 172 (339)
..+|||.|||+|+++..++++. ...+++++|+|+.++++|+.++...+. ...+++++++|.....
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~--~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGI--GTDRSPIVCEDSLEKE 249 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTC--CSSCCSEEECCTTTSC
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCC--CcCCCCEeeCCCCCCc
Confidence 4589999999999999888652 235799999999999999998765532 1126789999976431
Q ss_pred HhcCCceeEEEecCCCCCCCCcccc-----C------CcHHHHHHHHccccCCCcEEEEe
Q 019550 173 EKRNEKFDVIFGDLADPVEGGPCYQ-----L------YTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 173 ~~~~~~yDvIi~D~~d~~~~~p~~~-----L------~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
..++||+|++++|-......... + ....|++. +.+.|+|||.+++-
T Consensus 250 --~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~-~~~~Lk~gG~~a~V 306 (445)
T 2okc_A 250 --PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQH-MMLMLKTGGRAAVV 306 (445)
T ss_dssp --CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHH-HHHHEEEEEEEEEE
T ss_pred --ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHH-HHHHhccCCEEEEE
Confidence 23589999999973211000000 0 01478998 78999999988654
No 268
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.50 E-value=1.2e-07 Score=96.01 Aligned_cols=143 Identities=8% Similarity=-0.028 Sum_probs=91.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCC---------------CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccH
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKS---------------LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDA 168 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~---------------~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~ 168 (339)
+.+.+|||.+||+|+++..++++.. ..++.++|+|+.++++|+.++...+. +.++.+..+|.
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi---~~~i~i~~gDt 319 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI---DFNFGKKNADS 319 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC---CCBCCSSSCCT
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC---Ccccceeccch
Confidence 4455999999999999988765321 35799999999999999999876532 23455578886
Q ss_pred HHHHHhcCCceeEEEecCCCCCC---C--------------------CccccCCcHHHHHHHHccccCCCcEEEEecCCC
Q 019550 169 KAELEKRNEKFDVIFGDLADPVE---G--------------------GPCYQLYTKSFYERILKPKLNDNGIFVTQAGPA 225 (339)
Q Consensus 169 ~~~l~~~~~~yDvIi~D~~d~~~---~--------------------~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~ 225 (339)
...-.....+||+|+++||-... . .+...-..-.|++. +.+.|+|||.+++-....
T Consensus 320 L~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~-~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 320 FLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLH-MLYHLAPTGSMALLLANG 398 (544)
T ss_dssp TTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHH-HHHTEEEEEEEEEEEETH
T ss_pred hcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHH-HHHHhccCceEEEEecch
Confidence 53211124689999999984321 0 01111111368998 789999999876543211
Q ss_pred CccCchhhHHHHHHHHHhHCCceEE
Q 019550 226 GIFTHKEVFSSIYNTIKQVFKHVVA 250 (339)
Q Consensus 226 ~~~~~~~~~~~i~~~l~~~F~~v~~ 250 (339)
.+.........+.+.|.+.+....+
T Consensus 399 ~L~~~~~~~~~iRk~Lle~~~l~aI 423 (544)
T 3khk_A 399 SMSSNTNNEGEIRKTLVEQDLVECM 423 (544)
T ss_dssp HHHCCGGGHHHHHHHHHHTTCEEEE
T ss_pred hhhcCcchHHHHHHHHHhCCcHhEE
Confidence 1111213456677777776654333
No 269
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.50 E-value=3.1e-07 Score=83.39 Aligned_cols=75 Identities=19% Similarity=0.335 Sum_probs=59.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++.+|+.++--.....| .|+
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~~~~~~~~-~vv 99 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD------HDNFQVLNKDILQFKFPKNQSY-KIF 99 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT------CCSEEEECCCGGGCCCCSSCCC-EEE
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc------CCCeEEEEChHHhCCcccCCCe-EEE
Confidence 346789999999999999999853 7899999999999999998753 3689999999876421112345 577
Q ss_pred ecCC
Q 019550 184 GDLA 187 (339)
Q Consensus 184 ~D~~ 187 (339)
++++
T Consensus 100 ~nlP 103 (244)
T 1qam_A 100 GNIP 103 (244)
T ss_dssp EECC
T ss_pred EeCC
Confidence 7776
No 270
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.49 E-value=1.1e-07 Score=83.48 Aligned_cols=125 Identities=16% Similarity=0.115 Sum_probs=80.7
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.++.+||+||||+|..+..+. .+++++|+++. +++++.+|+.+ +....++||+|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~-------------------~~~~~~~d~~~-~~~~~~~fD~v~ 120 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL-------------------DPRVTVCDMAQ-VPLEDESVDVAV 120 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-------------------STTEEESCTTS-CSCCTTCEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-------------------CceEEEecccc-CCCCCCCEeEEE
Confidence 456789999999999988762 57999999987 34566777654 222346899999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH-CCceEEEEEeecccCCce
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV-FKHVVAYTAHVPSFADTW 262 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~-F~~v~~~~~~iP~~~~~~ 262 (339)
+...-.. --...+++. +++.|+|||.+++..... .......+.+.+++. |..+.. ...++.+
T Consensus 121 ~~~~l~~-------~~~~~~l~~-~~~~L~~gG~l~i~~~~~----~~~~~~~~~~~l~~~Gf~~~~~-----~~~~~~~ 183 (215)
T 2zfu_A 121 FCLSLMG-------TNIRDFLEE-ANRVLKPGGLLKVAEVSS----RFEDVRTFLRAVTKLGFKIVSK-----DLTNSHF 183 (215)
T ss_dssp EESCCCS-------SCHHHHHHH-HHHHEEEEEEEEEEECGG----GCSCHHHHHHHHHHTTEEEEEE-----ECCSTTC
T ss_pred Eehhccc-------cCHHHHHHH-HHHhCCCCeEEEEEEcCC----CCCCHHHHHHHHHHCCCEEEEE-----ecCCCeE
Confidence 8654221 123588898 799999999988753211 111234555666665 332221 1123446
Q ss_pred eEEEEecC
Q 019550 263 GWVMASDQ 270 (339)
Q Consensus 263 ~~~~as~~ 270 (339)
.++++.|.
T Consensus 184 ~~~~~~k~ 191 (215)
T 2zfu_A 184 FLFDFQKT 191 (215)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 66777765
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.46 E-value=5.5e-07 Score=82.22 Aligned_cols=100 Identities=21% Similarity=0.361 Sum_probs=71.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH-HHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE-LEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~-l~~~~~~yDvI 182 (339)
.+..+||+||||+|.++..+++. +..+|++||+|+.+++.+++. . .++++++.+|+.++ +....+.| .|
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~-------~~~v~~i~~D~~~~~~~~~~~~~-~v 99 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G-------DERLEVINEDASKFPFCSLGKEL-KV 99 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C-------CTTEEEECSCTTTCCGGGSCSSE-EE
T ss_pred CCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c-------CCCeEEEEcchhhCChhHccCCc-EE
Confidence 34678999999999999999985 458999999999999999887 2 36899999998764 22222234 78
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHcc-ccCCCcEEEEec
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKP-KLNDNGIFVTQA 222 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~-~L~~gGilv~~~ 222 (339)
+.+++-.. .+.-+++. +.. ..-+.+++++|.
T Consensus 100 v~NlPy~i--------~~~il~~l-l~~~~~~~~~~~m~Qk 131 (249)
T 3ftd_A 100 VGNLPYNV--------ASLIIENT-VYNKDCVPLAVFMVQK 131 (249)
T ss_dssp EEECCTTT--------HHHHHHHH-HHTGGGCSEEEEEEEH
T ss_pred EEECchhc--------cHHHHHHH-HhcCCCCceEEEEEeH
Confidence 88887432 13334443 433 334567777774
No 272
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.43 E-value=1.9e-07 Score=87.50 Aligned_cols=76 Identities=22% Similarity=0.298 Sum_probs=58.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++. ..+|++||+|+.+++.+++++.... .++++++.+|+.++ ...+||+|+
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~----~~~v~~~~~D~~~~---~~~~~D~Vv 111 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEG----YNNLEVYEGDAIKT---VFPKFDVCT 111 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTT----CCCEEC----CCSS---CCCCCSEEE
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEECchhhC---CcccCCEEE
Confidence 35678999999999999999874 4699999999999999999876432 36899999998653 235799999
Q ss_pred ecCCC
Q 019550 184 GDLAD 188 (339)
Q Consensus 184 ~D~~d 188 (339)
+|++-
T Consensus 112 ~n~py 116 (299)
T 2h1r_A 112 ANIPY 116 (299)
T ss_dssp EECCG
T ss_pred EcCCc
Confidence 99863
No 273
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.40 E-value=1.7e-06 Score=87.52 Aligned_cols=140 Identities=12% Similarity=0.033 Sum_probs=92.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcC---CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH--HHhcCCce
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK---SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE--LEKRNEKF 179 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~---~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~--l~~~~~~y 179 (339)
...+|||.+||+|+++..++++. +..++.++|+|+.++++|+.++...+. ..+++++..+|.... -.....+|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi--~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV--PIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC--CGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC--CcCccceEecceecccccccccccc
Confidence 35689999999999998887752 357899999999999999998765532 125789999997643 11224689
Q ss_pred eEEEecCCCCCCCCc-----------------cccCCcHHHHHHHHccccC-CCcEEEEecCCCCccCchhhHHHHHHHH
Q 019550 180 DVIFGDLADPVEGGP-----------------CYQLYTKSFYERILKPKLN-DNGIFVTQAGPAGIFTHKEVFSSIYNTI 241 (339)
Q Consensus 180 DvIi~D~~d~~~~~p-----------------~~~L~t~ef~~~~~~~~L~-~gGilv~~~~~~~~~~~~~~~~~i~~~l 241 (339)
|+|+.+||-...... +..-..-.|++. +.+.|+ +||.+++-.... ..........+.+.|
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~-~l~~Lk~~gGr~a~VlP~g-~Lf~~~~~~~iRk~L 376 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLH-GYYHLKQDNGVMAIVLPHG-VLFRGNAEGTIRKAL 376 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHH-HHHTBCTTTCEEEEEEETH-HHHCCTHHHHHHHHH
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHH-HHHHhCCCceeEEEEecch-HhhCCchhHHHHHHH
Confidence 999999983211000 000011358998 788999 999876543211 111222345677777
Q ss_pred HhHCCce
Q 019550 242 KQVFKHV 248 (339)
Q Consensus 242 ~~~F~~v 248 (339)
.+.+...
T Consensus 377 le~~~l~ 383 (542)
T 3lkd_A 377 LEEGAID 383 (542)
T ss_dssp HHTTCEE
T ss_pred HhCCcee
Confidence 7665533
No 274
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.39 E-value=3e-07 Score=87.73 Aligned_cols=97 Identities=15% Similarity=0.129 Sum_probs=73.4
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
...+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|..+ .. ..||+|++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~---~~-~~~D~v~~ 257 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----------NENLNFVGGDMFK---SI-PSADAVLL 257 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----------CSSEEEEECCTTT---CC-CCCSEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----------CCCcEEEeCccCC---CC-CCceEEEE
Confidence 467999999999999999998877789999999 888876654 1459999999865 22 25999998
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCC---CcEEEEe
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLND---NGIFVTQ 221 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~---gGilv~~ 221 (339)
...-.. -+ .-....+++. +++.|+| ||.+++.
T Consensus 258 ~~vlh~--~~--d~~~~~~l~~-~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 258 KWVLHD--WN--DEQSLKILKN-SKEAISHKGKDGKVIII 292 (358)
T ss_dssp ESCGGG--SC--HHHHHHHHHH-HHHHTGGGGGGCEEEEE
T ss_pred cccccC--CC--HHHHHHHHHH-HHHhCCCCCCCcEEEEE
Confidence 764221 00 0012378898 7999999 9977764
No 275
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.34 E-value=4e-07 Score=93.38 Aligned_cols=103 Identities=16% Similarity=0.266 Sum_probs=73.3
Q ss_pred CCeEEEEecchhHHHHHHHh---cCC-CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 106 PKTVFIMGGGEGSAAREALK---HKS-LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~---~~~-~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
.+.||++|+|.|-+...+++ ... ..+|.+||.+|. ...+++....++- +.+|+++.+|.+++ ..+++.|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~---~dkVtVI~gd~eev--~LPEKVDI 431 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEW---GSQVTVVSSDMREW--VAPEKADI 431 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTT---GGGEEEEESCTTTC--CCSSCEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccC---CCeEEEEeCcceec--cCCcccCE
Confidence 34699999999999544443 221 126899999985 5566766654432 57899999998875 34689999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEE
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFV 219 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv 219 (339)
||+...... .. .++. .+.+.. ..+.|||||+++
T Consensus 432 IVSEwMG~f--Ll-~E~m-levL~A-rdr~LKPgGimi 464 (637)
T 4gqb_A 432 IVSELLGSF--AD-NELS-PECLDG-AQHFLKDDGVSI 464 (637)
T ss_dssp EECCCCBTT--BG-GGCH-HHHHHH-HGGGEEEEEEEE
T ss_pred EEEEcCccc--cc-ccCC-HHHHHH-HHHhcCCCcEEc
Confidence 999997543 11 2222 366776 689999999987
No 276
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.34 E-value=4.4e-07 Score=91.86 Aligned_cols=139 Identities=7% Similarity=-0.050 Sum_probs=89.1
Q ss_pred CCeEEEEecchhHHHHHHHhcCC------------------CCEEEEEEcCHHHHHHHHHhhhhhcccc-CCCCeEEEEc
Q 019550 106 PKTVFIMGGGEGSAAREALKHKS------------------LEKVVMCDIDQEVVDFCRRFLTVNQEAF-CSKKLNLVVN 166 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~------------------~~~v~~VEid~~vi~~ar~~f~~~~~~~-~~~rv~v~~~ 166 (339)
..+|||.|||+|+++..+.++.. ..+++++|+|+.++++|+.++...+... .+.+++++++
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLG 249 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEES
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeC
Confidence 45899999999999988776421 1379999999999999999876543200 0013789999
Q ss_pred cHHHHHHhcCCceeEEEecCCCCCCCCc--------cccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHH
Q 019550 167 DAKAELEKRNEKFDVIFGDLADPVEGGP--------CYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIY 238 (339)
Q Consensus 167 D~~~~l~~~~~~yDvIi~D~~d~~~~~p--------~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~ 238 (339)
|.........++||+|+.+||-...... ...-....|++. +.+.|+|||.+++-.... ..........+.
T Consensus 250 DtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~-~l~~Lk~gGr~a~V~p~~-~L~~~~~~~~iR 327 (541)
T 2ar0_A 250 NTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQH-IIETLHPGGRAAVVVPDN-VLFEGGKGTDIR 327 (541)
T ss_dssp CTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHH-HHHHEEEEEEEEEEEEHH-HHHCCTHHHHHH
T ss_pred CCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHH-HHHHhCCCCEEEEEecCc-ceecCcHHHHHH
Confidence 9876543334689999999974221000 000112378998 788999999877543111 011112334566
Q ss_pred HHHHhHCC
Q 019550 239 NTIKQVFK 246 (339)
Q Consensus 239 ~~l~~~F~ 246 (339)
+.|.+.+.
T Consensus 328 ~~L~~~~~ 335 (541)
T 2ar0_A 328 RDLMDKCH 335 (541)
T ss_dssp HHHHHHEE
T ss_pred HHHhhcCC
Confidence 66666553
No 277
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.32 E-value=6.4e-07 Score=93.52 Aligned_cols=145 Identities=10% Similarity=0.002 Sum_probs=88.6
Q ss_pred CCCeEEEEecchhHHHHHHHhcCC---CCEEEEEEcCHHHHHHH--HHhhhhhccccCCCCeEEEEccHHHHHHhcCCce
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKS---LEKVVMCDIDQEVVDFC--RRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKF 179 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~---~~~v~~VEid~~vi~~a--r~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~y 179 (339)
...+|||.|||+|+++..++++.+ ..+++++|||+.++++| +.++..+......+...+..+|....-....++|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 467899999999999999887653 35799999999999999 5554332111112334666777654211224689
Q ss_pred eEEEecCCCCCCCC-ccc-----------------c-----CCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHH
Q 019550 180 DVIFGDLADPVEGG-PCY-----------------Q-----LYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSS 236 (339)
Q Consensus 180 DvIi~D~~d~~~~~-p~~-----------------~-----L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~ 236 (339)
|+||++||-..... ... . -....|++. +.+.|++||.+++-.....+.........
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~-Al~lLKpGGrLAfIlP~s~Lf~sg~~~kk 479 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLEL-VTELVQDGTVISAIMPKQYLTAQGNESKA 479 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHH-HHHHSCTTCEEEEEEETHHHHCCSHHHHH
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHH-HHHhcCCCcEEEEEEChHHhccCChHHHH
Confidence 99999998421000 000 0 012357888 78899999988764322111111223455
Q ss_pred HHHHHHhHCCceEE
Q 019550 237 IYNTIKQVFKHVVA 250 (339)
Q Consensus 237 i~~~l~~~F~~v~~ 250 (339)
+.+.|.+.+.....
T Consensus 480 LRk~LLe~~~I~aI 493 (878)
T 3s1s_A 480 FREFLVGNFGLEHI 493 (878)
T ss_dssp HHHHHTTTTCEEEE
T ss_pred HHHHHHhCCCeEEE
Confidence 66666665554433
No 278
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.31 E-value=1.8e-06 Score=88.92 Aligned_cols=122 Identities=15% Similarity=0.281 Sum_probs=81.0
Q ss_pred hHHHHHhhhhcccCC---CCCeEEEEecchhHHHHHHHhc---C----------CCCEEEEEEcCHHHHHHHHHhhhhhc
Q 019550 90 IYHECLIHPPLLCHQ---NPKTVFIMGGGEGSAAREALKH---K----------SLEKVVMCDIDQEVVDFCRRFLTVNQ 153 (339)
Q Consensus 90 ~Y~e~l~~~~l~~~~---~p~~VL~IG~G~G~~~~~l~~~---~----------~~~~v~~VEid~~vi~~ar~~f~~~~ 153 (339)
.|.+++...-.-..+ ..+.||++|||+|.+...+++. . ...+|.+||.++..+...++... ++
T Consensus 391 ~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng 469 (745)
T 3ua3_A 391 VYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT 469 (745)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT
T ss_pred HHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC
Confidence 466666643111111 2356999999999996433221 1 13489999999977765555433 22
Q ss_pred cccCCCCeEEEEccHHHHHH----hcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 154 EAFCSKKLNLVVNDAKAELE----KRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 154 ~~~~~~rv~v~~~D~~~~l~----~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
+ ..+|+++.+|.+++-. ...++.|+||+..-... + ...| ..|.+.. +.+.|+|||+++=
T Consensus 470 --~-~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsf--l-~nEL-~pe~Ld~-v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 470 --W-KRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSF--G-DNEL-SPECLDG-VTGFLKPTTISIP 532 (745)
T ss_dssp --T-TTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTT--B-GGGS-HHHHHHT-TGGGSCTTCEEES
T ss_pred --C-CCeEEEEeCchhhcccccccCCCCcccEEEEeccccc--c-chhc-cHHHHHH-HHHhCCCCcEEEC
Confidence 1 4789999999998732 11589999999997432 1 1233 4578887 7899999999873
No 279
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.29 E-value=1.2e-06 Score=81.51 Aligned_cols=107 Identities=17% Similarity=0.066 Sum_probs=82.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcC-----CCCEEEEEEcCHH--------------------------HHHHHHHhhhhh
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHK-----SLEKVVMCDIDQE--------------------------VVDFCRRFLTVN 152 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~-----~~~~v~~VEid~~--------------------------vi~~ar~~f~~~ 152 (339)
..|++||+||+..|..+..+++.. +..+|+++|..+. .++.++++|...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 468999999999999988776432 3578999996421 366788888654
Q ss_pred ccccCCCCeEEEEccHHHHHHhc-CCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 153 QEAFCSKKLNLVVNDAKAELEKR-NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 153 ~~~~~~~rv~v~~~D~~~~l~~~-~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+ +..++++++.+|+.+.|... .++||+|.+|.- .. -.+.++|+. +..+|+|||++++.
T Consensus 185 g--l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD-~y-------~~~~~~Le~-~~p~L~pGGiIv~D 243 (282)
T 2wk1_A 185 D--LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD-LY-------ESTWDTLTN-LYPKVSVGGYVIVD 243 (282)
T ss_dssp T--CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC-SH-------HHHHHHHHH-HGGGEEEEEEEEES
T ss_pred C--CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC-cc-------ccHHHHHHH-HHhhcCCCEEEEEc
Confidence 3 22479999999999988765 378999999974 11 125688998 79999999999984
No 280
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.29 E-value=3.7e-06 Score=80.78 Aligned_cols=120 Identities=9% Similarity=0.071 Sum_probs=86.3
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhcc--ccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQE--AFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~--~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
+..+|||+++|.|+=+..++.......|+++|+++.=++..++++..... .....++++...|++.+-....++||.|
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~V 227 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRV 227 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEE
Confidence 34689999999999888888765556899999999999988888754311 1123679999999998876667899999
Q ss_pred EecCCCCCC------CCcc-ccC-----------CcHHHHHHHHccccCCCcEEEEecCCC
Q 019550 183 FGDLADPVE------GGPC-YQL-----------YTKSFYERILKPKLNDNGIFVTQAGPA 225 (339)
Q Consensus 183 i~D~~d~~~------~~p~-~~L-----------~t~ef~~~~~~~~L~~gGilv~~~~~~ 225 (339)
++|++-... ..|. ... ...+.++. +.+.|+|||+||-.+.+.
T Consensus 228 LlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~-a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 228 LVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAA-GLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp EEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHH-HHHTEEEEEEEEEEESCC
T ss_pred EECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHH-HHhcCCCCcEEEEEeCCC
Confidence 999983210 0110 000 12456666 678999999998666554
No 281
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.27 E-value=7.2e-07 Score=92.97 Aligned_cols=111 Identities=10% Similarity=-0.041 Sum_probs=75.8
Q ss_pred CCCeEEEEecchhHHHHHHHhcC------------------------------------------CCCEEEEEEcCHHHH
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK------------------------------------------SLEKVVMCDIDQEVV 142 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~------------------------------------------~~~~v~~VEid~~vi 142 (339)
....+||.+||+|+++.+++... +..+|+++|+|+.++
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 45689999999999999888631 124799999999999
Q ss_pred HHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-CCceeEEEecCCCCCCCCccccCCcHHHHHHHHcc---ccCCCcEE
Q 019550 143 DFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKP---KLNDNGIF 218 (339)
Q Consensus 143 ~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~---~L~~gGil 218 (339)
++|+++....+. +.++++..+|+.+..... .++||+|++|||-....+... -..++|+. +.+ .+.|||.+
T Consensus 270 ~~A~~N~~~agv---~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~--~l~~ly~~-l~~~lk~~~~g~~~ 343 (703)
T 3v97_A 270 QRARTNARLAGI---GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEP--ALIALHSL-LGRIMKNQFGGWNL 343 (703)
T ss_dssp HHHHHHHHHTTC---GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCH--HHHHHHHH-HHHHHHHHCTTCEE
T ss_pred HHHHHHHHHcCC---CCceEEEECChhhCccccccCCCCEEEeCCCccccccchh--HHHHHHHH-HHHHHHhhCCCCeE
Confidence 999999876543 356999999987742211 128999999998543211111 11345554 333 44578876
Q ss_pred EEe
Q 019550 219 VTQ 221 (339)
Q Consensus 219 v~~ 221 (339)
++-
T Consensus 344 ~il 346 (703)
T 3v97_A 344 SLF 346 (703)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 282
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.20 E-value=1.2e-06 Score=80.19 Aligned_cols=76 Identities=14% Similarity=0.245 Sum_probs=57.2
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH-HHhc---CCcee
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE-LEKR---NEKFD 180 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~-l~~~---~~~yD 180 (339)
...+||+||||+|.++. +.+ .+..+|++||+|+.+++.+++.+... ++++++.+|+.++ +... .+..|
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~------~~v~~i~~D~~~~~~~~~~~~~~~~~ 92 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG------PKLTIYQQDAMTFNFGELAEKMGQPL 92 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG------GGEEEECSCGGGCCHHHHHHHHTSCE
T ss_pred CcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC------CceEEEECchhhCCHHHhhcccCCce
Confidence 45689999999999999 654 32223999999999999999886532 5899999999773 2221 12457
Q ss_pred EEEecCCC
Q 019550 181 VIFGDLAD 188 (339)
Q Consensus 181 vIi~D~~d 188 (339)
.|+.+++-
T Consensus 93 ~vvsNlPY 100 (252)
T 1qyr_A 93 RVFGNLPY 100 (252)
T ss_dssp EEEEECCT
T ss_pred EEEECCCC
Confidence 89999874
No 283
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.19 E-value=1.8e-06 Score=80.08 Aligned_cols=76 Identities=14% Similarity=0.215 Sum_probs=57.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCC--CEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH-HHhcCC---
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSL--EKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE-LEKRNE--- 177 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~--~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~-l~~~~~--- 177 (339)
.+..+||+||||+|.++..+++.... .+|++||+|+.+++.+++.+ . ++++++.+|+.++ +.....
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~------~~v~~i~~D~~~~~~~~~~~~~~ 112 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G------ELLELHAGDALTFDFGSIARPGD 112 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G------GGEEEEESCGGGCCGGGGSCSSS
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C------CCcEEEECChhcCChhHhccccc
Confidence 34678999999999999999985321 33999999999999999883 2 5799999999775 222111
Q ss_pred -ceeEEEecCC
Q 019550 178 -KFDVIFGDLA 187 (339)
Q Consensus 178 -~yDvIi~D~~ 187 (339)
..+.|+.+++
T Consensus 113 ~~~~~vv~NlP 123 (279)
T 3uzu_A 113 EPSLRIIGNLP 123 (279)
T ss_dssp SCCEEEEEECC
T ss_pred CCceEEEEccC
Confidence 3457888876
No 284
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.15 E-value=1.3e-06 Score=74.30 Aligned_cols=112 Identities=12% Similarity=0.126 Sum_probs=75.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh--cCCceeE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK--RNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~--~~~~yDv 181 (339)
....+||+||||. + .+|+++++++.|++.+. .+++++.+|+.+.-.. ..++||+
T Consensus 11 ~~g~~vL~~~~g~---------------v-~vD~s~~ml~~a~~~~~--------~~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 11 SAGQFVAVVWDKS---------------S-PVEALKGLVDKLQALTG--------NEGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp CTTSEEEEEECTT---------------S-CHHHHHHHHHHHHHHTT--------TTSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred CCCCEEEEecCCc---------------e-eeeCCHHHHHHHHHhcc--------cCcEEEEechhcCccccCCCCCEeE
Confidence 4568999999985 1 39999999999998753 2489999998764321 4578999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCcc---CchhhHHHHHHHHHhHC
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIF---THKEVFSSIYNTIKQVF 245 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~---~~~~~~~~i~~~l~~~F 245 (339)
|++...-.. .+ . ....+++. +++.|+|||.+++........ .......++.+.|++..
T Consensus 67 V~~~~~l~~--~~-~--~~~~~l~~-~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 127 (176)
T 2ld4_A 67 ILSGLVPGS--TT-L--HSAEILAE-IARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSG 127 (176)
T ss_dssp EEECCSTTC--CC-C--CCHHHHHH-HHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTT
T ss_pred EEECChhhh--cc-c--CHHHHHHH-HHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCC
Confidence 998654222 10 0 13689999 899999999998852100000 00112456777777763
No 285
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.01 E-value=4.4e-06 Score=77.00 Aligned_cols=149 Identities=12% Similarity=0.100 Sum_probs=90.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
....+|||||||.|+....+++..+..++.++++.-.+. .-+.....+ +.++..+.+|. +...-..++||+|+
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~-----~~pi~~~~~-g~~ii~~~~~~-dv~~l~~~~~DlVl 145 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH-----EKPMNVQSL-GWNIITFKDKT-DIHRLEPVKCDTLL 145 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC-----CCCCCCCBT-TGGGEEEECSC-CTTTSCCCCCSEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc-----ccccccCcC-CCCeEEEeccc-eehhcCCCCccEEE
Confidence 345689999999999999888776777888888863320 001110000 11333344442 11122357899999
Q ss_pred ecCCCCCCCCcc--ccCCcHHHHHHHHccccCCC-cEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeecccC-
Q 019550 184 GDLADPVEGGPC--YQLYTKSFYERILKPKLNDN-GIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFA- 259 (339)
Q Consensus 184 ~D~~d~~~~~p~--~~L~t~ef~~~~~~~~L~~g-Gilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~- 259 (339)
+|.... . +.. .+.-+...++. +.+.|+|| |.+++-.-.| + ...+..+++.|+..|..|... -| -.
T Consensus 146 sD~apn-s-G~~~~D~~rs~~LL~~-a~~~LkpG~G~FV~KVf~p--y--g~~~~~l~~~lk~~F~~V~~~---KP-aSR 214 (277)
T 3evf_A 146 CDIGES-S-SSSVTEGERTVRVLDT-VEKWLACGVDNFCVKVLAP--Y--MPDVLEKLELLQRRFGGTVIR---NP-LSR 214 (277)
T ss_dssp ECCCCC-C-SCHHHHHHHHHHHHHH-HHHHHTTCCSEEEEEESCT--T--SHHHHHHHHHHHHHHCCEEEC---CT-TSC
T ss_pred ecCccC-c-CchHHHHHHHHHHHHH-HHHHhCCCCCeEEEEecCC--C--CccHHHHHHHHHHhcCCEEEE---eC-CCC
Confidence 998633 2 221 11111223555 67899999 9999975332 1 345678899999999998865 35 22
Q ss_pred -Cc-eeEEEEecC
Q 019550 260 -DT-WGWVMASDQ 270 (339)
Q Consensus 260 -~~-~~~~~as~~ 270 (339)
.. -.|++|..+
T Consensus 215 ~~S~E~Y~V~~~r 227 (277)
T 3evf_A 215 NSTHEMYYVSGAR 227 (277)
T ss_dssp TTCCCEEEESSCC
T ss_pred CCCCceEEEEecC
Confidence 11 246777544
No 286
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.96 E-value=2.4e-07 Score=83.90 Aligned_cols=76 Identities=17% Similarity=0.359 Sum_probs=60.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+||+||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++.+|+.++--...++| .|+
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~~~~~~~f-~vv 98 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL------NTRVTLIHQDILQFQFPNKQRY-KIV 98 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT------CSEEEECCSCCTTTTCCCSSEE-EEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc------CCceEEEECChhhcCcccCCCc-EEE
Confidence 345689999999999999998853 7899999999999999887651 4689999999876421112578 788
Q ss_pred ecCCC
Q 019550 184 GDLAD 188 (339)
Q Consensus 184 ~D~~d 188 (339)
++++-
T Consensus 99 ~n~Py 103 (245)
T 1yub_A 99 GNIPY 103 (245)
T ss_dssp EECCS
T ss_pred EeCCc
Confidence 88763
No 287
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.95 E-value=5.7e-05 Score=78.02 Aligned_cols=145 Identities=12% Similarity=0.091 Sum_probs=97.9
Q ss_pred CCeEEEEecchhHHHHHHHhcC----------C--CCEEEEEEc---CHHHHHHHHHhhhh------------h------
Q 019550 106 PKTVFIMGGGEGSAAREALKHK----------S--LEKVVMCDI---DQEVVDFCRRFLTV------------N------ 152 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~----------~--~~~v~~VEi---d~~vi~~ar~~f~~------------~------ 152 (339)
.-+||++|.|+|......++.. . ..+++.+|. +++.+..+-..++. +
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 3589999999999887665531 1 135789999 88888744433221 0
Q ss_pred -ccccCC--CCeEEEEccHHHHHHhc----CCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCC
Q 019550 153 -QEAFCS--KKLNLVVNDAKAELEKR----NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPA 225 (339)
Q Consensus 153 -~~~~~~--~rv~v~~~D~~~~l~~~----~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~ 225 (339)
...+++ -+++++.+|+++.|.+. ..++|+|+.|.|.|.. . ..|++.++|+. +.+.++|||.++..+.
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~-n--p~~w~~~~~~~-l~~~~~~g~~~~t~~~-- 220 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAK-N--PDMWTQNLFNA-MARLARPGGTLATFTS-- 220 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGG-C--GGGSCHHHHHH-HHHHEEEEEEEEESCC--
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcC-C--hhhhhHHHHHH-HHHHhCCCCEEEeccC--
Confidence 112233 35678999999999875 3679999999997752 2 47999999999 8999999999987542
Q ss_pred CccCchhhHHHHHHHHHhHCCceEEEEEeecccCCceeEEEEe
Q 019550 226 GIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMAS 268 (339)
Q Consensus 226 ~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~~~~~~~~as 268 (339)
. ..+.+.|.++.-.+.. .|.++....++.+.
T Consensus 221 -----~---~~vr~~L~~aGf~v~~----~~~~g~krem~~~~ 251 (676)
T 3ps9_A 221 -----A---GFVRRGLQDAGFTMQK----RKGFGRKREMLCGV 251 (676)
T ss_dssp -----C---HHHHHHHHHHTCEEEE----EECSTTCCEEEEEE
T ss_pred -----c---HHHHHHHHhCCeEEEe----ccccccchhhhhee
Confidence 1 2456777776554443 34444444444433
No 288
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.89 E-value=4.3e-05 Score=79.14 Aligned_cols=131 Identities=13% Similarity=0.114 Sum_probs=89.9
Q ss_pred CCCeEEEEecchhHHHHHHHhcC----------C--CCEEEEEEc---CHHHHHHHHHhhhh------------------
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK----------S--LEKVVMCDI---DQEVVDFCRRFLTV------------------ 151 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~----------~--~~~v~~VEi---d~~vi~~ar~~f~~------------------ 151 (339)
++.+||++|.|+|.....+.+.. + ..+++.+|. +.+.+..+-..++.
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 35689999999999887766531 1 146899999 44444433222211
Q ss_pred -hccccCCC--CeEEEEccHHHHHHhc----CCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCC
Q 019550 152 -NQEAFCSK--KLNLVVNDAKAELEKR----NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 152 -~~~~~~~~--rv~v~~~D~~~~l~~~----~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
....++++ +++++.+|+++.|... ..++|.|++|.|.|.. . ..+++.++|.. +.+.+++||.++..+.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~-n--p~~w~~~~~~~-l~~~~~~g~~~~t~~~- 212 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAK-N--PDMWNEQLFNA-MARMTRPGGTFSTFTA- 212 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---C--CTTCSHHHHHH-HHHHEEEEEEEEESCC-
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCC-C--hhhhhHHHHHH-HHHHhCCCCEEEeccC-
Confidence 01123444 5678999999999865 4789999999998752 2 37999999999 7999999999887542
Q ss_pred CCccCchhhHHHHHHHHHhHCCceE
Q 019550 225 AGIFTHKEVFSSIYNTIKQVFKHVV 249 (339)
Q Consensus 225 ~~~~~~~~~~~~i~~~l~~~F~~v~ 249 (339)
. ..+.+.+.++.-.+.
T Consensus 213 ------~---~~vr~~l~~aGf~~~ 228 (689)
T 3pvc_A 213 ------A---GFVRRGLQQAGFNVT 228 (689)
T ss_dssp ------C---HHHHHHHHHTTCEEE
T ss_pred ------c---HHHHHHHHhCCeEEE
Confidence 1 245667777655444
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.87 E-value=4.2e-05 Score=70.83 Aligned_cols=73 Identities=25% Similarity=0.219 Sum_probs=61.6
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH---HHhcC-Ccee
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE---LEKRN-EKFD 180 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~---l~~~~-~~yD 180 (339)
+...+||++||.|+.++++++. ..+|+++|.||.+++.|++ +. ++|++++++|..++ ++... +++|
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~-------~~rv~lv~~~f~~l~~~L~~~g~~~vD 91 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LH-------LPGLTVVQGNFRHLKRHLAALGVERVD 91 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TC-------CTTEEEEESCGGGHHHHHHHTTCSCEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hc-------cCCEEEEECCcchHHHHHHHcCCCCcC
Confidence 4568999999999999999986 4699999999999999998 63 26899999998876 44433 5799
Q ss_pred EEEecCC
Q 019550 181 VIFGDLA 187 (339)
Q Consensus 181 vIi~D~~ 187 (339)
.|+.|+.
T Consensus 92 gIL~DLG 98 (285)
T 1wg8_A 92 GILADLG 98 (285)
T ss_dssp EEEEECS
T ss_pred EEEeCCc
Confidence 9999985
No 290
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.81 E-value=3.1e-06 Score=78.09 Aligned_cols=161 Identities=13% Similarity=0.096 Sum_probs=96.1
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEc--cHHHHHHhcCCceeEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVN--DAKAELEKRNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~--D~~~~l~~~~~~yDvI 182 (339)
...+|||||||.|+....+++..+..+|+++++.......+ .....+ +.++..... |.. ....+++|+|
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~p-----i~~~~~-g~~ii~~~~~~dv~---~l~~~~~DvV 160 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKP-----IMRTTL-GWNLIRFKDKTDVF---NMEVIPGDTL 160 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCC-----CCCCBT-TGGGEEEECSCCGG---GSCCCCCSEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccc-----cccccC-CCceEEeeCCcchh---hcCCCCcCEE
Confidence 44589999999999999988767788899999965421111 100000 122222222 322 2235789999
Q ss_pred EecCCCCCCCCcc--ccCCcHHHHHHHHccccCCC--cEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeeccc
Q 019550 183 FGDLADPVEGGPC--YQLYTKSFYERILKPKLNDN--GIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 258 (339)
Q Consensus 183 i~D~~d~~~~~p~--~~L~t~ef~~~~~~~~L~~g--Gilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~ 258 (339)
++|.... . |.. .+.-+.+.++. +.+.|+|| |.+++-.-.| + ...+..+++.|+..|..|... -| -
T Consensus 161 LSDmApn-s-G~~~~D~~rs~~LL~~-A~~~Lk~g~~G~Fv~KvF~p--y--g~~~~~l~~~lk~~F~~V~~~---KP-a 229 (282)
T 3gcz_A 161 LCDIGES-S-PSIAVEEQRTLRVLNC-AKQWLQEGNYTEFCIKVLCP--Y--TPLIMEELSRLQLKHGGGLVR---VP-L 229 (282)
T ss_dssp EECCCCC-C-SCHHHHHHHHHHHHHH-HHHHHHHHCCCEEEEEESCC--C--SHHHHHHHHHHHHHHCCEEEC---CT-T
T ss_pred EecCccC-C-CChHHHHHHHHHHHHH-HHHHcCCCCCCcEEEEEecC--C--CccHHHHHHHHHHhcCCEEEE---cC-C
Confidence 9998743 2 221 11112234554 67899999 9999975322 0 345678899999999998765 35 3
Q ss_pred C--Cc-eeEEEEecC-CC----CCCHHHHHHHHHh
Q 019550 259 A--DT-WGWVMASDQ-PF----SINAEEIDNRIKS 285 (339)
Q Consensus 259 ~--~~-~~~~~as~~-p~----~~~~~~l~~r~~~ 285 (339)
. .. -.|++|..+ +. +.....|..|+..
T Consensus 230 SR~~S~E~Y~V~~~r~n~~~~v~~~s~~l~~r~~~ 264 (282)
T 3gcz_A 230 SRNSTHEMYWVSGTRTDVVGTVSNVSRLLTRRMLN 264 (282)
T ss_dssp SCTTCCCEEEETTCCCCSHHHHHHHHHHHHHHHHS
T ss_pred CcccCcceeEEEecCCCccchHHHHHHHHHHHHhc
Confidence 2 11 246777544 21 1122446666653
No 291
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.67 E-value=3.9e-05 Score=71.29 Aligned_cols=165 Identities=12% Similarity=0.097 Sum_probs=96.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+.++||||||+.|+....+++..++.+|+++|+...... .+.....+..+-+.+..+ .+...-..+++|+|+
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~-----~P~~~~~~~~~iv~~~~~--~di~~l~~~~~DlVl 152 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHE-----KPIHMQTLGWNIVKFKDK--SNVFTMPTEPSDTLL 152 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSC-----CCCCCCBTTGGGEEEECS--CCTTTSCCCCCSEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccc-----ccccccccCCceEEeecC--ceeeecCCCCcCEEe
Confidence 4567899999999999999998667788999998643210 000000000111222211 122222357899999
Q ss_pred ecCCCCCCCCcc--ccCCcHHHHHHHHccccCCC-cEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeecc-cC
Q 019550 184 GDLADPVEGGPC--YQLYTKSFYERILKPKLNDN-GIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPS-FA 259 (339)
Q Consensus 184 ~D~~d~~~~~p~--~~L~t~ef~~~~~~~~L~~g-Gilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~-~~ 259 (339)
+|.... . |.. .+.-+...++. +.+.|+|| |.|++-.-.| + ...+..++..|+..|..|..+ -|+ -.
T Consensus 153 sD~APn-s-G~~~~D~~rs~~LL~~-A~~~LkpG~G~FV~KvF~~--y--G~~~~~ll~~lk~~F~~V~~~---KPaSR~ 222 (300)
T 3eld_A 153 CDIGES-S-SNPLVERDRTMKVLEN-FERWKHVNTENFCVKVLAP--Y--HPDVIEKLERLQLRFGGGIVR---VPFSRN 222 (300)
T ss_dssp ECCCCC-C-SSHHHHHHHHHHHHHH-HHHHCCTTCCEEEEEESST--T--SHHHHHHHHHHHHHHCCEEEC---CTTSCT
T ss_pred ecCcCC-C-CCHHHHHHHHHHHHHH-HHHHhcCCCCcEEEEeccc--c--CccHHHHHHHHHHhCCcEEEE---eCCCCC
Confidence 998633 2 321 11112233554 67899999 9999975322 1 345778899999999998765 352 11
Q ss_pred C-ceeEEEEecCC-C----CCCHHHHHHHHHh
Q 019550 260 D-TWGWVMASDQP-F----SINAEEIDNRIKS 285 (339)
Q Consensus 260 ~-~~~~~~as~~p-~----~~~~~~l~~r~~~ 285 (339)
. .-.|++|.... . +.....|..|++.
T Consensus 223 ~S~E~Y~V~~~r~n~~~~v~~~~~~l~~r~~~ 254 (300)
T 3eld_A 223 STHEMYYISGARNNITHMVNTTSRSLLRRMTR 254 (300)
T ss_dssp TCCCEEEESSCCCCHHHHHHHHHHHHHHHHHS
T ss_pred CChHHeeeccCCCCcchhHHHHHHHHHHHHhc
Confidence 1 22467775442 1 1122446666653
No 292
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.53 E-value=0.00056 Score=63.43 Aligned_cols=150 Identities=16% Similarity=0.168 Sum_probs=87.6
Q ss_pred hhHHHHHhhhh--cccCCCCCeEEEEec------chhHHHHHHHhcCCC-CEEEEEEcCHHHHHHHHHhhhhhccccCCC
Q 019550 89 FIYHECLIHPP--LLCHQNPKTVFIMGG------GEGSAAREALKHKSL-EKVVMCDIDQEVVDFCRRFLTVNQEAFCSK 159 (339)
Q Consensus 89 ~~Y~e~l~~~~--l~~~~~p~~VL~IG~------G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~ar~~f~~~~~~~~~~ 159 (339)
..|+++.-.+- -+..|...+||++|+ .-|+.. +.+..+. ..|+.|||.|-+. +.
T Consensus 91 ~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavDL~~~~s---------------da 153 (344)
T 3r24_A 91 AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSDLNDFVS---------------DA 153 (344)
T ss_dssp HHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEESSCCBC---------------SS
T ss_pred HHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEeeCccccc---------------CC
Confidence 46777655442 123466789999996 455532 2222333 5899999976541 22
Q ss_pred CeEEEEccHHHHHHhcCCceeEEEecCCCCCCCC---cc-ccC-CcHHHHHHHHccccCCCcEEEEecCCCCccCchhhH
Q 019550 160 KLNLVVNDAKAELEKRNEKFDVIFGDLADPVEGG---PC-YQL-YTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVF 234 (339)
Q Consensus 160 rv~v~~~D~~~~l~~~~~~yDvIi~D~~d~~~~~---p~-~~L-~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~ 234 (339)
. .++.+|..+. ....+||+||+|......+. +. ... +-+..++- +.+.|+|||.|++-. +.... .
T Consensus 154 ~-~~IqGD~~~~--~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdf-A~~~LkpGGsFvVKV-----FQGsg-~ 223 (344)
T 3r24_A 154 D-STLIGDCATV--HTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGF-IKQKLALGGSIAVKI-----TEHSW-N 223 (344)
T ss_dssp S-EEEESCGGGE--EESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHH-HHHHEEEEEEEEEEE-----CSSSC-C
T ss_pred C-eEEEcccccc--ccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHH-HHHhCcCCCEEEEEE-----ecCCC-H
Confidence 3 3489996542 23578999999998533211 10 011 12344443 678999999999874 22222 2
Q ss_pred HHHHHHHHhHCCceEEEEEeecccC-CceeEEEEe
Q 019550 235 SSIYNTIKQVFKHVVAYTAHVPSFA-DTWGWVMAS 268 (339)
Q Consensus 235 ~~i~~~l~~~F~~v~~~~~~iP~~~-~~~~~~~as 268 (339)
+.+..+++.|..|..+.. -+-. ..-.|++|.
T Consensus 224 -~~L~~lrk~F~~VK~fK~--ASRa~SsEvYLVG~ 255 (344)
T 3r24_A 224 -ADLYKLMGHFSWWTAFVT--NVNASSSEAFLIGA 255 (344)
T ss_dssp -HHHHHHHTTEEEEEEEEE--GGGTTSSCEEEEEE
T ss_pred -HHHHHHHhhCCeEEEECC--CCCCCCeeEEEEee
Confidence 334556678998888741 1222 223577774
No 293
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.40 E-value=0.00026 Score=67.10 Aligned_cols=75 Identities=17% Similarity=0.206 Sum_probs=60.0
Q ss_pred CCCeEEEEecchhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHH---HhcC--Cc
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAEL---EKRN--EK 178 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l---~~~~--~~ 178 (339)
+...++|..+|.|+-++.+++.. +..+|+++|.||.+++.++ .+ . ++|++++.++..++. .... ++
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~-----~~Rv~lv~~nF~~l~~~L~~~g~~~~ 128 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D-----DPRFSIIHGPFSALGEYVAERDLIGK 128 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C-----CTTEEEEESCGGGHHHHHHHTTCTTC
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c-----CCcEEEEeCCHHHHHHHHHhcCCCCc
Confidence 34679999999999999999863 5679999999999999995 33 1 579999999877653 3322 36
Q ss_pred eeEEEecCC
Q 019550 179 FDVIFGDLA 187 (339)
Q Consensus 179 yDvIi~D~~ 187 (339)
+|.|+.|+.
T Consensus 129 vDgILfDLG 137 (347)
T 3tka_A 129 IDGILLDLG 137 (347)
T ss_dssp EEEEEEECS
T ss_pred ccEEEECCc
Confidence 999999994
No 294
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.35 E-value=0.0013 Score=62.58 Aligned_cols=150 Identities=15% Similarity=0.147 Sum_probs=93.4
Q ss_pred CCeEEEEecchhHHHHHHHhcCC--CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-C-CceeE
Q 019550 106 PKTVFIMGGGEGSAAREALKHKS--LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-N-EKFDV 181 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~--~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~-~~yDv 181 (339)
+.+|+++.||.|++...+.+. + ...|.++|+|+..++..+.+++. ..++.+|..++.... . ..+|+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~~~---------~~~~~~Di~~~~~~~~~~~~~D~ 71 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNFPH---------TQLLAKTIEGITLEEFDRLSFDM 71 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECSCGGGCCHHHHHHHCCSE
T ss_pred CCeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhccc---------cccccCCHHHccHhHcCcCCcCE
Confidence 457999999999999988763 4 35789999999999999998742 346678876643211 1 26999
Q ss_pred EEecCCC-CCC-CCc-------cccCCcHHHHHHHHccccC--CCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEE
Q 019550 182 IFGDLAD-PVE-GGP-------CYQLYTKSFYERILKPKLN--DNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVA 250 (339)
Q Consensus 182 Ii~D~~d-~~~-~~p-------~~~L~t~ef~~~~~~~~L~--~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~ 250 (339)
|+.+++- +.. .+. -..| -.++++. + +.++ |.-+++=|+.. +.....+..+.+.|.+..-.+..
T Consensus 72 l~~gpPCq~fS~ag~~~g~~d~r~~l-~~~~~~~-i-~~~~~~P~~~~~ENV~~---l~~~~~~~~i~~~l~~~GY~v~~ 145 (343)
T 1g55_A 72 ILMSPPCQPFTRIGRQGDMTDSRTNS-FLHILDI-L-PRLQKLPKYILLENVKG---FEVSSTRDLLIQTIENCGFQYQE 145 (343)
T ss_dssp EEECCC------------------CH-HHHHHHH-G-GGCSSCCSEEEEEEETT---GGGSHHHHHHHHHHHHTTEEEEE
T ss_pred EEEcCCCcchhhcCCcCCccCccchH-HHHHHHH-H-HHhcCCCCEEEEeCCcc---ccCHHHHHHHHHHHHHCCCeeEE
Confidence 9999982 110 010 0112 2356664 4 5677 88666645422 22345677888888776555544
Q ss_pred EEEeecccC----CceeEEEEecCC
Q 019550 251 YTAHVPSFA----DTWGWVMASDQP 271 (339)
Q Consensus 251 ~~~~iP~~~----~~~~~~~as~~p 271 (339)
..+.-..|| ..-.|++|++..
T Consensus 146 ~vl~a~~~GvPQ~R~R~~iv~~~~~ 170 (343)
T 1g55_A 146 FLLSPTSLGIPNSRLRYFLIAKLQS 170 (343)
T ss_dssp EEECGGGGTCSCCCCEEEEEEEESS
T ss_pred EEEEHHHCCCCCcccEEEEEEEeCC
Confidence 333333343 224578887643
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.24 E-value=0.00028 Score=71.06 Aligned_cols=135 Identities=13% Similarity=0.067 Sum_probs=82.6
Q ss_pred CCeEEEEecchhHHHHHHHhcC----C---------CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHH
Q 019550 106 PKTVFIMGGGEGSAAREALKHK----S---------LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAEL 172 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~----~---------~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l 172 (339)
..+|+|-.||+|++...+.++. . ...+.++|+|+.+..+|+-++-.++ .+.-++..+|...+-
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg----~~~~~I~~~dtL~~~ 293 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG----LEYPRIDPENSLRFP 293 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT----CSCCEEECSCTTCSC
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC----CccccccccccccCc
Confidence 4589999999999988776531 1 2469999999999999998876653 234567888875431
Q ss_pred -Hh--cCCceeEEEecCCCCCCC----------CccccCCcHHHHHHHHccccC-------CCcEEEEecCCCCccCchh
Q 019550 173 -EK--RNEKFDVIFGDLADPVEG----------GPCYQLYTKSFYERILKPKLN-------DNGIFVTQAGPAGIFTHKE 232 (339)
Q Consensus 173 -~~--~~~~yDvIi~D~~d~~~~----------~p~~~L~t~ef~~~~~~~~L~-------~gGilv~~~~~~~~~~~~~ 232 (339)
.. ...+||+|+.+||-.... .+...-...-|++. +.+.|+ +||.+++-.... .+....
T Consensus 294 ~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~-~l~~Lk~~~~~l~~gGr~avVlP~g-~Lf~~~ 371 (530)
T 3ufb_A 294 LREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQL-IMRKLKRPGHGSDNGGRAAVVVPNG-TLFSDG 371 (530)
T ss_dssp GGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHH-HHHHBCCTTSSSSSCCEEEEEEEHH-HHHCCT
T ss_pred hhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHH-HHHHhhhhhhccCCCceEEEEecch-hhhccc
Confidence 11 125799999999842110 00001112346666 455565 799876543111 111222
Q ss_pred hHHHHHHHHHhHCC
Q 019550 233 VFSSIYNTIKQVFK 246 (339)
Q Consensus 233 ~~~~i~~~l~~~F~ 246 (339)
.-..+.+.|.+.+.
T Consensus 372 ~~~~iRk~Lle~~~ 385 (530)
T 3ufb_A 372 ISARIKEELLKNFN 385 (530)
T ss_dssp HHHHHHHHHHHHSE
T ss_pred hHHHHHHHHhhcCE
Confidence 33456777776654
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.19 E-value=0.0013 Score=59.27 Aligned_cols=132 Identities=14% Similarity=0.121 Sum_probs=90.0
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEc-cHHHHHHhcCCceeEEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVN-DAKAELEKRNEKFDVIF 183 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~-D~~~~l~~~~~~yDvIi 183 (339)
....||||||+.|+...+++...++.+|.++|+-+.--+ .|..-..+.-+-+++..+ |.. ++ .+.++|.|+
T Consensus 78 ~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe-----~P~~~~s~gwn~v~fk~gvDv~-~~--~~~~~Dtll 149 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHE-----EPVPMSTYGWNIVKLMSGKDVF-YL--PPEKCDTLL 149 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSC-----CCCCCCCTTTTSEEEECSCCGG-GC--CCCCCSEEE
T ss_pred CCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCcc-----CcchhhhcCcCceEEEecccee-ec--CCccccEEE
Confidence 455899999999999999998888889999999654321 121112233467899988 852 22 347799999
Q ss_pred ecCCCCCCCCcc-ccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEE
Q 019550 184 GDLADPVEGGPC-YQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAY 251 (339)
Q Consensus 184 ~D~~d~~~~~p~-~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~ 251 (339)
+|... ....|. .+--|...++. +.+.|++ |-+++-.-+|+ .+ .+.+..+.|+..|..+.+.
T Consensus 150 cDIge-Ss~~~~vE~~RtlrvLel-a~~wL~~-~~fc~KVl~py---~p-~v~e~l~~lq~~fgg~lVR 211 (267)
T 3p8z_A 150 CDIGE-SSPSPTVEESRTIRVLKM-VEPWLKN-NQFCIKVLNPY---MP-TVIEHLERLQRKHGGMLVR 211 (267)
T ss_dssp ECCCC-CCSCHHHHHHHHHHHHHH-HGGGCSS-CEEEEEESCCC---SH-HHHHHHHHHHHHHCCEEEC
T ss_pred EecCC-CCCChhhhhhHHHHHHHH-HHHhccc-CCEEEEEccCC---Ch-hHHHHHHHHHHHhCCEeEe
Confidence 99975 211221 11122346775 6889998 88888876662 23 3457788899999988754
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.17 E-value=0.00072 Score=61.57 Aligned_cols=130 Identities=15% Similarity=0.036 Sum_probs=78.9
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCe---EEEEc-cHHHHHHhcCCce
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKL---NLVVN-DAKAELEKRNEKF 179 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv---~v~~~-D~~~~l~~~~~~y 179 (339)
.+..+||||||+-|+....+++..+...|.+..+.... .-.+... ..+.+ .+..+ |.++ ....++
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-----~~~P~~~---~~~Gv~~i~~~~G~Df~~---~~~~~~ 140 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-----HEEPMLM---QSYGWNIVTMKSGVDVFY---KPSEIS 140 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-----SCCCCCC---CSTTGGGEEEECSCCGGG---SCCCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-----ccCCCcc---cCCCceEEEeeccCCccC---CCCCCC
Confidence 44678999999999999998886444444554443221 0011110 01344 44446 8765 224689
Q ss_pred eEEEecCCCCCCCCcc-ccCCcHHHHHHHHccccCCCc-EEEEecCCCCccCchhhHHHHHHHHHhHCCceEE
Q 019550 180 DVIFGDLADPVEGGPC-YQLYTKSFYERILKPKLNDNG-IFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVA 250 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~-~~L~t~ef~~~~~~~~L~~gG-ilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~ 250 (339)
|+|++|.... ...+. .+.-+...++- +.+.|+||| .+++-.-.+ ....+.+.++.+++.|..+..
T Consensus 141 DvVLSDMAPn-SG~~~vD~~Rs~~aL~~-A~~~Lk~gG~~FvvKVFqg----~~~~~~~~l~~lk~~F~~vkv 207 (269)
T 2px2_A 141 DTLLCDIGES-SPSAEIEEQRTLRILEM-VSDWLSRGPKEFCIKILCP----YMPKVIEKLESLQRRFGGGLV 207 (269)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHH-HHHHHTTCCSEEEEEESCT----TSHHHHHHHHHHHHHHCCEEE
T ss_pred CEEEeCCCCC-CCccHHHHHHHHHHHHH-HHHHhhcCCcEEEEEECCC----CchHHHHHHHHHHHHcCCEEE
Confidence 9999999743 21211 11112224554 568999999 898865222 124567788899999999873
No 298
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.16 E-value=0.00045 Score=66.07 Aligned_cols=59 Identities=10% Similarity=0.071 Sum_probs=50.2
Q ss_pred CCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH
Q 019550 106 PKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE 171 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~ 171 (339)
...||+||.|.|.+.+.+++.....+|++||+|+..+...++.+ . .++++++.+|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~--~-----~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF--E-----GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT--T-----TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc--c-----CCCEEEEECCccch
Confidence 46799999999999999997533468999999999999888765 1 37899999999765
No 299
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.14 E-value=0.0065 Score=57.30 Aligned_cols=148 Identities=10% Similarity=0.045 Sum_probs=97.7
Q ss_pred CCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEec
Q 019550 106 PKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGD 185 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D 185 (339)
..+++++.||.|++...+.+ .+...+.++|+|+..++..+.+++.. . .+|..++....-..+|+|+.+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~-aG~~~v~~~e~d~~a~~t~~~N~~~~------~-----~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALES-CGAECVYSNEWDKYAQEVYEMNFGEK------P-----EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHH-TTCEEEEEECCCHHHHHHHHHHHSCC------C-----BSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHH-CCCeEEEEEeCCHHHHHHHHHHcCCC------C-----cCCHHHcCHhhCCCCCEEEEC
Confidence 46899999999999998887 56778899999999999999987532 1 578777654433569999999
Q ss_pred CCC-CCC-CC-------ccccCCcHHHHHHHHccccCCCcEEEEecCCCCccC--chhhHHHHHHHHHhHCCceEEEEEe
Q 019550 186 LAD-PVE-GG-------PCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFT--HKEVFSSIYNTIKQVFKHVVAYTAH 254 (339)
Q Consensus 186 ~~d-~~~-~~-------p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~--~~~~~~~i~~~l~~~F~~v~~~~~~ 254 (339)
++- +.+ .+ +-..| -.+|.+. + +.++|.-+++=|+. ++.. ....+..+.+.|.+..-.+......
T Consensus 79 pPCQ~fS~ag~~~g~~d~r~~L-~~~~~r~-i-~~~~P~~~~~ENV~--gl~~~~~~~~~~~i~~~l~~~GY~v~~~vl~ 153 (327)
T 2c7p_A 79 FPCQAFSISGKQKGFEDSRGTL-FFDIARI-V-REKKPKVVFMENVK--NFASHDNGNTLEVVKNTMNELDYSFHAKVLN 153 (327)
T ss_dssp CCCTTTCTTSCCCGGGSTTSCH-HHHHHHH-H-HHHCCSEEEEEEEG--GGGTGGGGHHHHHHHHHHHHTTBCCEEEEEE
T ss_pred CCCCCcchhcccCCCcchhhHH-HHHHHHH-H-HhccCcEEEEeCcH--HHHhccccHHHHHHHHHHHhCCCEEEEEEEE
Confidence 972 111 01 11112 2467775 4 46899876665642 1121 2346778888888876666654444
Q ss_pred ecccC----CceeEEEEecC
Q 019550 255 VPSFA----DTWGWVMASDQ 270 (339)
Q Consensus 255 iP~~~----~~~~~~~as~~ 270 (339)
-..|| ..-.|++|++.
T Consensus 154 a~~~GvPQ~R~R~~iv~~~~ 173 (327)
T 2c7p_A 154 ALDYGIPQKRERIYMICFRN 173 (327)
T ss_dssp GGGGTCSBCCEEEEEEEEBG
T ss_pred HHHcCCCccceEEEEEEEeC
Confidence 44454 22347888753
No 300
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.99 E-value=0.01 Score=57.01 Aligned_cols=148 Identities=14% Similarity=0.126 Sum_probs=92.6
Q ss_pred CeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-------cCCce
Q 019550 107 KTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-------RNEKF 179 (339)
Q Consensus 107 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-------~~~~y 179 (339)
-+|++|.||.|++...+.+ .+...+.+||+|+..++..+.+++ ...++.+|..+.... ....+
T Consensus 3 ~~vidLFsG~GGlslG~~~-aG~~~v~avE~d~~a~~t~~~N~~---------~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAAR-AGFDVKMAVEIDQHAINTHAINFP---------RSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHH-HTCEEEEEECSCHHHHHHHHHHCT---------TSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHH-CCCcEEEEEeCCHHHHHHHHHhCC---------CCceEecChhhcCHHHHHhhcccCCCe
Confidence 3799999999999998876 466678899999999999888753 456777887654211 23679
Q ss_pred eEEEecCCC-CCC-CCc------cccCCcHHHHHHHHccccCCCcEEEEecCCCCccC--chhhHHHHHHHHHhHCCce-
Q 019550 180 DVIFGDLAD-PVE-GGP------CYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFT--HKEVFSSIYNTIKQVFKHV- 248 (339)
Q Consensus 180 DvIi~D~~d-~~~-~~p------~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~--~~~~~~~i~~~l~~~F~~v- 248 (339)
|+|+.+++- +.+ .+. -..| -.+|++. + +.++|.-+++=|+.. +.. ....+..+. .|.+..-.+
T Consensus 73 D~i~ggpPCQ~fS~ag~~~~~d~r~~L-~~~~~~~-v-~~~~P~~~v~ENV~g--l~s~~~~~~~~~i~-~l~~~GY~v~ 146 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGKGNPDDSRNQL-YMHFYRL-V-SELQPLFFLAENVPG--IMQEKYSGIRNKAF-NLVSGDYDIL 146 (376)
T ss_dssp CEEEECCCCCTTC-------CHHHHHH-HHHHHHH-H-HHHCCSEEEEEECTT--TTCGGGHHHHHHHH-HHHHTTEEEC
T ss_pred eEEEecCCCCCcccccCCCCCCchHHH-HHHHHHH-H-HHhCCCEEEEecchH--hhccCcHHHHHHHH-HHHcCCCccC
Confidence 999999983 211 011 0112 2466664 4 578998777766532 121 233566666 777665444
Q ss_pred EEEEEeecccC----CceeEEEEecC
Q 019550 249 VAYTAHVPSFA----DTWGWVMASDQ 270 (339)
Q Consensus 249 ~~~~~~iP~~~----~~~~~~~as~~ 270 (339)
....+.-..|| ..-.|++|++.
T Consensus 147 ~~~vl~a~dyGvPQ~R~R~~iig~r~ 172 (376)
T 3g7u_A 147 DPIKVKASDYGAPTIRTRYFFIGVKK 172 (376)
T ss_dssp CCEEEEGGGGTCSBCCEEEEEEEEEG
T ss_pred cEEEEEHhhCCCCCCCcEEEEEEEeC
Confidence 32223333353 22347788753
No 301
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.90 E-value=0.00025 Score=59.34 Aligned_cols=64 Identities=17% Similarity=0.094 Sum_probs=45.5
Q ss_pred CCCCeEEEEecchh-HHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGEG-SAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~G-~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
..+.+||+||||.| ..+..++++.+ ..|+++||+|..++ ++.+|.++-....-+.||+|
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g-~~V~atDInp~Av~-------------------~v~dDiF~P~~~~Y~~~DLI 93 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSK-VDLVLTDIKPSHGG-------------------IVRDDITSPRMEIYRGAALI 93 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSC-CEEEEECSSCSSTT-------------------EECCCSSSCCHHHHTTEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCC-CeEEEEECCccccc-------------------eEEccCCCCcccccCCcCEE
Confidence 34679999999999 58888886554 67999999998776 44455443211111479999
Q ss_pred -EecCC
Q 019550 183 -FGDLA 187 (339)
Q Consensus 183 -i~D~~ 187 (339)
.+.++
T Consensus 94 YsirPP 99 (153)
T 2k4m_A 94 YSIRPP 99 (153)
T ss_dssp EEESCC
T ss_pred EEcCCC
Confidence 66665
No 302
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.67 E-value=0.0052 Score=59.30 Aligned_cols=111 Identities=10% Similarity=-0.018 Sum_probs=65.0
Q ss_pred CCeEEEEecchhHHHHHHHhc-----------------CCCCEEEEEEcC-----------HHHHHHHHHhhhhhccccC
Q 019550 106 PKTVFIMGGGEGSAAREALKH-----------------KSLEKVVMCDID-----------QEVVDFCRRFLTVNQEAFC 157 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~-----------------~~~~~v~~VEid-----------~~vi~~ar~~f~~~~~~~~ 157 (339)
+-+|+|+||++|..+..+... .|.-+|...|+- |...+..++..+ .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g------~ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENG------R 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTC------C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhcc------C
Confidence 678999999999887766543 234556666665 333332222110 0
Q ss_pred CCCeEEEEccHHHHHHh--cCCceeEEEecCCCCCCCCccccCCc---------------------------------HH
Q 019550 158 SKKLNLVVNDAKAELEK--RNEKFDVIFGDLADPVEGGPCYQLYT---------------------------------KS 202 (339)
Q Consensus 158 ~~rv~v~~~D~~~~l~~--~~~~yDvIi~D~~d~~~~~p~~~L~t---------------------------------~e 202 (339)
..+-.++.+.+..|-.+ ..+++|+|++...-.|-...+..|.. ..
T Consensus 127 ~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 127 KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 12235666666665433 25789999999875442211111111 12
Q ss_pred HHHHHHccccCCCcEEEEecC
Q 019550 203 FYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 203 f~~~~~~~~L~~gGilv~~~~ 223 (339)
|++. .++.|+|||.+++...
T Consensus 207 FL~~-Ra~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 207 FLRI-HSEELISRGRMLLTFI 226 (384)
T ss_dssp HHHH-HHHHEEEEEEEEEEEE
T ss_pred HHHH-HHHHhccCCeEEEEEe
Confidence 4665 5889999999998864
No 303
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.66 E-value=0.0014 Score=60.77 Aligned_cols=133 Identities=11% Similarity=0.022 Sum_probs=86.9
Q ss_pred CCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEc-cHHHHHHhcCCceeEEE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVN-DAKAELEKRNEKFDVIF 183 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~-D~~~~l~~~~~~yDvIi 183 (339)
....||||||+.|+...+++...++.+|.++|+-..--+ .|..-..+.-+-|.++.+ |.+ ++. +.++|+|+
T Consensus 94 ~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he-----~P~~~~ql~w~lV~~~~~~Dv~-~l~--~~~~D~iv 165 (321)
T 3lkz_A 94 PVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHE-----EPQLVQSYGWNIVTMKSGVDVF-YRP--SECCDTLL 165 (321)
T ss_dssp CCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSC-----CCCCCCBTTGGGEEEECSCCTT-SSC--CCCCSEEE
T ss_pred CCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCcc-----CcchhhhcCCcceEEEeccCHh-hCC--CCCCCEEE
Confidence 445899999999999999998888889999999654110 010000111133677766 653 232 36799999
Q ss_pred ecCCCCCCCCcc-ccCCcHHHHHHHHccccCCC-cEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEE
Q 019550 184 GDLADPVEGGPC-YQLYTKSFYERILKPKLNDN-GIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAY 251 (339)
Q Consensus 184 ~D~~d~~~~~p~-~~L~t~ef~~~~~~~~L~~g-Gilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~ 251 (339)
+|..... ..|. ..--|...++. +.+.|+++ |-+|+-.-+|+ .. .+.+.++.|+..|..+.+.
T Consensus 166 cDigeSs-~~~~ve~~Rtl~vLel-~~~wL~~~~~~f~~KVl~pY---~~-~v~e~l~~lq~~fgg~lvr 229 (321)
T 3lkz_A 166 CDIGESS-SSAEVEEHRTIRVLEM-VEDWLHRGPREFCVKVLCPY---MP-KVIEKMELLQRRYGGGLVR 229 (321)
T ss_dssp ECCCCCC-SCHHHHHHHHHHHHHH-HHHHHTTCCCEEEEEESCTT---SH-HHHHHHHHHHHHHCCEEEC
T ss_pred EECccCC-CChhhhhhHHHHHHHH-HHHHhccCCCcEEEEEcCCC---Ch-HHHHHHHHHHHHhCCEeEe
Confidence 9998322 1121 11112335665 67889998 89999876662 23 4557888999999988754
No 304
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.63 E-value=0.003 Score=58.52 Aligned_cols=46 Identities=9% Similarity=0.081 Sum_probs=40.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhh
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTV 151 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~ 151 (339)
.+...|||++||+|+++.++++. + .++++||+++.++++|++.+..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~-g-~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW-G-RRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-C-CeEEEEeCCHHHHHHHHHHHHH
Confidence 45678999999999999998873 3 6899999999999999999764
No 305
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.47 E-value=0.0091 Score=57.40 Aligned_cols=119 Identities=8% Similarity=0.038 Sum_probs=63.5
Q ss_pred CCCCeEEEEecchhHHHHHHHhc---------------CCCCEEEEEEcCHHHHHHHHHhhhhhcccc--------CCCC
Q 019550 104 QNPKTVFIMGGGEGSAAREALKH---------------KSLEKVVMCDIDQEVVDFCRRFLTVNQEAF--------CSKK 160 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~---------------~~~~~v~~VEid~~vi~~ar~~f~~~~~~~--------~~~r 160 (339)
+.+-+|+|+|||+|..+..+... .|.-+|...|+-..--...=+.++...... ...+
T Consensus 51 ~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~ 130 (374)
T 3b5i_A 51 PPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNR 130 (374)
T ss_dssp CCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCB
T ss_pred CCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCC
Confidence 44678999999999988766331 133455555554333222211121110000 0001
Q ss_pred eEEEEccHHHHHHh--cCCceeEEEecCCCCCCCCccccCC-------------------------c-------HHHHHH
Q 019550 161 LNLVVNDAKAELEK--RNEKFDVIFGDLADPVEGGPCYQLY-------------------------T-------KSFYER 206 (339)
Q Consensus 161 v~v~~~D~~~~l~~--~~~~yDvIi~D~~d~~~~~p~~~L~-------------------------t-------~ef~~~ 206 (339)
-.++.+.+..|-.+ ..+++|+|++...-.|-...+..+. . ..|++.
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 12344444444322 2578999999987555322111221 1 235676
Q ss_pred HHccccCCCcEEEEecC
Q 019550 207 ILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 207 ~~~~~L~~gGilv~~~~ 223 (339)
.++.|+|||.+++...
T Consensus 211 -ra~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 211 -RAAEVKRGGAMFLVCL 226 (374)
T ss_dssp -HHHHEEEEEEEEEEEE
T ss_pred -HHHHhCCCCEEEEEEe
Confidence 6899999999998753
No 306
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.43 E-value=0.0087 Score=56.05 Aligned_cols=98 Identities=20% Similarity=0.212 Sum_probs=67.6
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
...++||++|+|+ |.++.++++..+. +|++++.+++-.+.+++.-... . +.....|..+.+....+.+|+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~--~-----i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEV--A-----VNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSE--E-----EETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCE--E-----EeCCCcCHHHHHHHhCCCCCEE
Confidence 3467899999875 8888889988775 8999999999999988752110 0 0111135555555444579999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+..... .+.++. +.+.|+++|.++.-.
T Consensus 237 id~~g~------------~~~~~~-~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 237 LVTAVS------------PKAFSQ-AIGMVRRGGTIALNG 263 (340)
T ss_dssp EESSCC------------HHHHHH-HHHHEEEEEEEEECS
T ss_pred EEeCCC------------HHHHHH-HHHHhccCCEEEEeC
Confidence 866431 245666 678999999998643
No 307
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.38 E-value=0.035 Score=52.31 Aligned_cols=95 Identities=14% Similarity=0.120 Sum_probs=64.0
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEE------ccHHHHHHh-c
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVV------NDAKAELEK-R 175 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~------~D~~~~l~~-~ 175 (339)
...++||++|+|+ |.++..+++..+..+|++++.+++-.+.++++-. . +++. .|..+-+.. .
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa--------~--~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA--------D--LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC--------S--EEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC--------C--EEEcCcccccchHHHHHHHHh
Confidence 3467899999875 7778888888876699999999999898887521 1 1221 122222322 2
Q ss_pred CCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 176 NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 176 ~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
.+.+|+|+-... + .+.++. +.+.|+++|.++.-
T Consensus 240 ~~g~D~vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 240 GCKPEVTIECTG-----A-------EASIQA-GIYATRSGGTLVLV 272 (356)
T ss_dssp TSCCSEEEECSC-----C-------HHHHHH-HHHHSCTTCEEEEC
T ss_pred CCCCCEEEECCC-----C-------hHHHHH-HHHHhcCCCEEEEE
Confidence 357999986543 1 134555 56789999998864
No 308
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.31 E-value=0.039 Score=51.31 Aligned_cols=147 Identities=11% Similarity=0.112 Sum_probs=96.0
Q ss_pred eEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecCC
Q 019550 108 TVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLA 187 (339)
Q Consensus 108 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~ 187 (339)
+|++|-||.|++...+.+ .+..-+.++|+|+..++.-+.+++. +++.+|..+.-...-...|+|+.-++
T Consensus 2 kvidLFsG~GG~~~G~~~-aG~~~v~a~e~d~~a~~ty~~N~~~----------~~~~~DI~~i~~~~~~~~D~l~ggpP 70 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQK-AGFRIICANEYDKSIWKTYESNHSA----------KLIKGDISKISSDEFPKCDGIIGGPP 70 (331)
T ss_dssp EEEEESCTTCHHHHHHHH-TTCEEEEEEECCTTTHHHHHHHCCS----------EEEESCGGGCCGGGSCCCSEEECCCC
T ss_pred eEEEeCcCccHHHHHHHH-CCCEEEEEEeCCHHHHHHHHHHCCC----------CcccCChhhCCHhhCCcccEEEecCC
Confidence 699999999999887665 5667778999999999998888642 46788877643333357999998886
Q ss_pred C-CCC--------CCccccCCcHHHHHHHHccccCCCcEEEEecCCCCcc--CchhhHHHHHHHHHhHCCceEEEEEeec
Q 019550 188 D-PVE--------GGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIF--THKEVFSSIYNTIKQVFKHVVAYTAHVP 256 (339)
Q Consensus 188 d-~~~--------~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~--~~~~~~~~i~~~l~~~F~~v~~~~~~iP 256 (339)
- +.+ ..+-..| -.++++. + +.++|.-+++=|+. ++. .....+..+.+.|.+..-.+........
T Consensus 71 CQ~fS~ag~~~g~~d~R~~L-~~~~~r~-i-~~~~Pk~~~~ENV~--gl~~~~~~~~~~~i~~~l~~~GY~v~~~vlna~ 145 (331)
T 3ubt_Y 71 SQSWSEGGSLRGIDDPRGKL-FYEYIRI-L-KQKKPIFFLAENVK--GMMAQRHNKAVQEFIQEFDNAGYDVHIILLNAN 145 (331)
T ss_dssp GGGTEETTEECCTTCGGGHH-HHHHHHH-H-HHHCCSEEEEEECC--GGGGCTTSHHHHHHHHHHHHHTEEEEEEEEEGG
T ss_pred CCCcCCCCCccCCCCchhHH-HHHHHHH-H-hccCCeEEEeeeec--ccccccccchhhhhhhhhccCCcEEEEEecccc
Confidence 2 110 0111123 2466664 3 57899877665542 222 2345778888889888766665555444
Q ss_pred ccC----CceeEEEEecC
Q 019550 257 SFA----DTWGWVMASDQ 270 (339)
Q Consensus 257 ~~~----~~~~~~~as~~ 270 (339)
.|| ..-.|++|.+.
T Consensus 146 ~yGvPQ~R~Rvfivg~r~ 163 (331)
T 3ubt_Y 146 DYGVAQDRKRVFYIGFRK 163 (331)
T ss_dssp GTTCSBCCEEEEEEEEEG
T ss_pred cCCCCcccceEEEEEEcC
Confidence 454 12347888753
No 309
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.31 E-value=0.062 Score=50.69 Aligned_cols=149 Identities=14% Similarity=0.137 Sum_probs=93.6
Q ss_pred CeEEEEecchhHHHHHHHhcCCC--CEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc--CCceeEE
Q 019550 107 KTVFIMGGGEGSAAREALKHKSL--EKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR--NEKFDVI 182 (339)
Q Consensus 107 ~~VL~IG~G~G~~~~~l~~~~~~--~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~yDvI 182 (339)
-+++++.||.|++...+.+. +. .-|.++|+|+...+..+.+++. ..++.+|..+..... ...+|+|
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~~---------~~~~~~DI~~~~~~~~~~~~~D~l 73 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFPE---------TNLLNRNIQQLTPQVIKKWNVDTI 73 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECCCGGGCCHHHHHHTTCCEE
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCCC---------CceeccccccCCHHHhccCCCCEE
Confidence 47999999999999887763 43 5678999999999999988753 235667766542211 1369999
Q ss_pred EecCCC-CCC--------CCccccCCcHHHHHHHHccccC-CCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEE
Q 019550 183 FGDLAD-PVE--------GGPCYQLYTKSFYERILKPKLN-DNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYT 252 (339)
Q Consensus 183 i~D~~d-~~~--------~~p~~~L~t~ef~~~~~~~~L~-~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~ 252 (339)
+..++- +.. ..+-..|+ .++++. + +.++ |.=+++=|+. . +.....+..+.+.|.+..-.+....
T Consensus 74 ~ggpPCQ~fS~ag~~~~~~d~r~~L~-~~~~r~-i-~~~~~P~~~vlENV~--g-l~~~~~~~~i~~~l~~~GY~v~~~v 147 (333)
T 4h0n_A 74 LMSPPCQPFTRNGKYLDDNDPRTNSF-LYLIGI-L-DQLDNVDYILMENVK--G-FENSTVRNLFIDKLKECNFIYQEFL 147 (333)
T ss_dssp EECCCCCCSEETTEECCTTCTTSCCH-HHHHHH-G-GGCTTCCEEEEEECT--T-GGGSHHHHHHHHHHHHTTEEEEEEE
T ss_pred EecCCCcchhhhhhccCCcCcccccH-HHHHHH-H-HHhcCCCEEEEecch--h-hhhhhHHHHHHHHHHhCCCeEEEEE
Confidence 998872 110 01112232 467774 4 4665 8777665652 2 2233457778888887765555444
Q ss_pred EeecccC----CceeEEEEecCC
Q 019550 253 AHVPSFA----DTWGWVMASDQP 271 (339)
Q Consensus 253 ~~iP~~~----~~~~~~~as~~p 271 (339)
..-..|| ..-.|++|++..
T Consensus 148 l~a~~~GvPQ~R~R~fiva~r~~ 170 (333)
T 4h0n_A 148 LCPSTVGVPNSRLRYYCTARRNN 170 (333)
T ss_dssp ECTTTTTCSCCCCEEEEEEEETT
T ss_pred ecHHHcCCCccceEEEEEEEeCC
Confidence 3333343 223478888654
No 310
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.29 E-value=0.023 Score=53.90 Aligned_cols=98 Identities=13% Similarity=0.173 Sum_probs=65.4
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeE
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDv 181 (339)
...++||++|+|+ |.++..+++..+..+|++++.+++-.+.+++.-... . +.....|..+-+.. ..+.+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~--v-----i~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATH--V-----INSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSE--E-----EETTTSCHHHHHHHHTTSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCE--E-----ecCCccCHHHHHHHhcCCCCcE
Confidence 3457899999886 778888888777668999999999999998752110 0 00001243444433 2347999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
|+-... + .+.++. +.+.|+++|.+++-
T Consensus 262 vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 262 ALESTG-----S-------PEILKQ-GVDALGILGKIAVV 288 (371)
T ss_dssp EEECSC-----C-------HHHHHH-HHHTEEEEEEEEEC
T ss_pred EEECCC-----C-------HHHHHH-HHHHHhcCCEEEEe
Confidence 875443 1 245666 67899999998864
No 311
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.27 E-value=0.025 Score=53.40 Aligned_cols=98 Identities=15% Similarity=0.136 Sum_probs=67.3
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEE-----ccHHHHHHhc--
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVV-----NDAKAELEKR-- 175 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~-----~D~~~~l~~~-- 175 (339)
...++||++|+|+ |.++.++++..+...|++++.+++-.+.+++. .. .-+.... .|..+.++..
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~-------~~~~~~~~~~~~~~~~~~v~~~t~ 249 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP-------EVVTHKVERLSAEESAKKIVESFG 249 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT-------TCEEEECCSCCHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch-------hcccccccccchHHHHHHHHHHhC
Confidence 3467899999876 77888888888766699999999999999986 21 1122211 3334444332
Q ss_pred CCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 176 NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 176 ~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
.+.+|+|+-... + .+.++. +.+.|+++|.++.-.
T Consensus 250 g~g~Dvvid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 250 GIEPAVALECTG-----V-------ESSIAA-AIWAVKFGGKVFVIG 283 (363)
T ss_dssp SCCCSEEEECSC-----C-------HHHHHH-HHHHSCTTCEEEECC
T ss_pred CCCCCEEEECCC-----C-------hHHHHH-HHHHhcCCCEEEEEc
Confidence 357999886543 1 145666 578999999998653
No 312
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.17 E-value=0.033 Score=50.72 Aligned_cols=107 Identities=17% Similarity=0.215 Sum_probs=72.1
Q ss_pred CCCCeEEEEecchhHHHHHHHhc-------CCCCEEEEEE-----cCHH-----------------------HHHHH--H
Q 019550 104 QNPKTVFIMGGGEGSAAREALKH-------KSLEKVVMCD-----IDQE-----------------------VVDFC--R 146 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~-------~~~~~v~~VE-----id~~-----------------------vi~~a--r 146 (339)
.-|..|+++|+--|+.+..+++. .+..+|.+.| ..+. +-++. +
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 45889999999999988775542 2457899988 2210 11111 1
Q ss_pred HhhhhhccccCCCCeEEEEccHHHHHHh----c-CCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 147 RFLTVNQEAFCSKKLNLVVNDAKAELEK----R-NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 147 ~~f~~~~~~~~~~rv~v~~~D~~~~l~~----~-~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+++... ...+++++++.|++.+.|.. . .+++|+|.+|.- .. . -+...|+. +..+|+|||++++.
T Consensus 148 ~~~~~~--g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D-~Y--~-----~t~~~le~-~~p~l~~GGvIv~D 216 (257)
T 3tos_A 148 ECSDFF--GHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD-LY--E-----PTKAVLEA-IRPYLTKGSIVAFD 216 (257)
T ss_dssp HTTSTT--TTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC-CH--H-----HHHHHHHH-HGGGEEEEEEEEES
T ss_pred hhhhhc--CCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc-cc--c-----hHHHHHHH-HHHHhCCCcEEEEc
Confidence 111111 11248999999999988765 2 357999999984 21 1 25678898 78999999999985
No 313
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=95.98 E-value=0.0042 Score=59.60 Aligned_cols=71 Identities=11% Similarity=0.056 Sum_probs=53.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+..+|||||++.|+....+++. + .+|++||+.+---. . ..+++|+++.+|+..+.. ..+++|+|+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r-g-~~V~aVD~~~l~~~-l----------~~~~~V~~~~~d~~~~~~-~~~~~D~vv 275 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR-N-MWVYSVDNGPMAQS-L----------MDTGQVTWLREDGFKFRP-TRSNISWMV 275 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CEEEEECSSCCCHH-H----------HTTTCEEEECSCTTTCCC-CSSCEEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC-C-CEEEEEEhhhcChh-h----------ccCCCeEEEeCccccccC-CCCCcCEEE
Confidence 35678999999999999998884 3 68999997541111 0 126899999999987642 236799999
Q ss_pred ecCCC
Q 019550 184 GDLAD 188 (339)
Q Consensus 184 ~D~~d 188 (339)
+|...
T Consensus 276 sDm~~ 280 (375)
T 4auk_A 276 CDMVE 280 (375)
T ss_dssp ECCSS
T ss_pred EcCCC
Confidence 99974
No 314
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.96 E-value=0.028 Score=53.43 Aligned_cols=99 Identities=13% Similarity=0.129 Sum_probs=67.7
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh----cCCc
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK----RNEK 178 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~----~~~~ 178 (339)
...++||++|+|+ |.++..+++..+..+|++++.+++-.+++++.-... .+ .....|..+.+.. +.+.
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~--vi-----~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA--TV-----DPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE--EE-----CTTSSCHHHHHHSTTSSSTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE--EE-----CCCCcCHHHHHHhhhhccCCC
Confidence 4567899999876 778888888888779999999999999998852110 00 0012355555553 2347
Q ss_pred eeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 179 FDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 179 yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|+|+-... . .+.++. +.+.|+++|.+++-.
T Consensus 254 ~Dvvid~~G-----~-------~~~~~~-~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 254 VDVVIECAG-----V-------AETVKQ-STRLAKAGGTVVILG 284 (370)
T ss_dssp EEEEEECSC-----C-------HHHHHH-HHHHEEEEEEEEECS
T ss_pred CCEEEECCC-----C-------HHHHHH-HHHHhccCCEEEEEe
Confidence 999885432 1 245666 577999999988643
No 315
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.91 E-value=0.01 Score=55.90 Aligned_cols=98 Identities=12% Similarity=0.145 Sum_probs=65.5
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-C-Ccee
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-N-EKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~-~~yD 180 (339)
...++||++|+|+ |.++..+++..+..+|++++.+++-.+++++.-... . +.....|..+.+... . ..+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~--v-----i~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATD--I-----INYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCE--E-----ECGGGSCHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCce--E-----EcCCCcCHHHHHHHHcCCCCCC
Confidence 3467899999875 777888888887668999999999889998862110 0 000113444444432 2 4699
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+|+-....+ +.++. +.+.|+++|.++.-
T Consensus 238 ~v~d~~g~~------------~~~~~-~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 238 KVVIAGGDV------------HTFAQ-AVKMIKPGSDIGNV 265 (352)
T ss_dssp EEEECSSCT------------THHHH-HHHHEEEEEEEEEC
T ss_pred EEEECCCCh------------HHHHH-HHHHHhcCCEEEEe
Confidence 998543321 33555 56789999998864
No 316
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.77 E-value=0.093 Score=49.36 Aligned_cols=150 Identities=19% Similarity=0.200 Sum_probs=91.4
Q ss_pred CCCeEEEEecchhHHHHHHHhcCC--CCEE-EEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh--cCCce
Q 019550 105 NPKTVFIMGGGEGSAAREALKHKS--LEKV-VMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK--RNEKF 179 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~~--~~~v-~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~--~~~~y 179 (339)
.+-+++++.||.|++...+.+ .+ ...+ .++|+|+...+..+.+++.. ++.+|..+.... ....+
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~-aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----------~~~~DI~~~~~~~i~~~~~ 77 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYER-SSININATFIPFDINEIANKIYSKNFKEE----------VQVKNLDSISIKQIESLNC 77 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHH-SSCCCCEEEEEECCCHHHHHHHHHHHCCC----------CBCCCTTTCCHHHHHHTCC
T ss_pred CCCEEEEECCChhHHHHHHHH-cCCCceEEEEEEECCHHHHHHHHHHCCCC----------cccCChhhcCHHHhccCCC
Confidence 355899999999999988776 34 2556 79999999999999987532 344555443111 01269
Q ss_pred eEEEecCCC-CC--C-CC-------ccccCCcHHHHH-HHHcccc--CCCcEEEEecCCCCccCchhhHHHHHHHHHhHC
Q 019550 180 DVIFGDLAD-PV--E-GG-------PCYQLYTKSFYE-RILKPKL--NDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVF 245 (339)
Q Consensus 180 DvIi~D~~d-~~--~-~~-------p~~~L~t~ef~~-~~~~~~L--~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F 245 (339)
|+|+..++- +. . .+ +-..| -.++++ . + +.+ +|.-+++=|+. . +.....+..+.+.|.+..
T Consensus 78 Dil~ggpPCQ~fs~S~ag~~~~~~d~r~~L-~~~~~r~~-i-~~~~~~P~~~~lENV~--g-l~~~~~~~~i~~~l~~~G 151 (327)
T 3qv2_A 78 NTWFMSPPCQPYNNSIMSKHKDINDPRAKS-VLHLYRDI-L-PYLINKPKHIFIENVP--L-FKESLVFKEIYNILIKNQ 151 (327)
T ss_dssp CEEEECCCCTTCSHHHHTTTCTTTCGGGHH-HHHHHHTT-G-GGCSSCCSEEEEEECG--G-GGGSHHHHHHHHHHHHTT
T ss_pred CEEEecCCccCcccccCCCCCCCccccchh-HHHHHHHH-H-HHhccCCCEEEEEchh--h-hcChHHHHHHHHHHHhCC
Confidence 999998873 22 1 01 10111 124444 3 2 355 68766665542 2 223456778888888876
Q ss_pred CceEEEEEeecccC----CceeEEEEecCC
Q 019550 246 KHVVAYTAHVPSFA----DTWGWVMASDQP 271 (339)
Q Consensus 246 ~~v~~~~~~iP~~~----~~~~~~~as~~p 271 (339)
-.+....+.-..|| ..-.|++|++..
T Consensus 152 Y~v~~~vl~a~~yGvPQ~R~R~fivg~r~~ 181 (327)
T 3qv2_A 152 YYIKDIICSPIDIGIPNSRTRYYVMARLTP 181 (327)
T ss_dssp CEEEEEEECGGGGTCSBCCCEEEEEEESSC
T ss_pred CEEEEEEEeHHHcCCCccceEEEEEEEeCC
Confidence 66665544434453 223478888654
No 317
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.74 E-value=0.028 Score=52.60 Aligned_cols=97 Identities=14% Similarity=0.191 Sum_probs=65.6
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc--CCcee
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR--NEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~yD 180 (339)
...++||++|+|+ |.++..+++..+..+|++++.+++-.+.+++.-.. .+--...|..+.+... ...+|
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~--------~~i~~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGAD--------AAVKSGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCS--------EEEECSTTHHHHHHHHHGGGCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCC--------EEEcCCCcHHHHHHHHhCCCCCe
Confidence 3467899999875 77788888877678999999999999999875211 1100112333444332 24799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+|+-.... .+.++. +.+.|+++|.+++-
T Consensus 242 ~v~d~~G~------------~~~~~~-~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 242 AVFDFVGA------------QSTIDT-AQQVVAVDGHISVV 269 (345)
T ss_dssp EEEESSCC------------HHHHHH-HHHHEEEEEEEEEC
T ss_pred EEEECCCC------------HHHHHH-HHHHHhcCCEEEEE
Confidence 98865431 245666 67899999998864
No 318
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=95.69 E-value=0.006 Score=58.36 Aligned_cols=115 Identities=11% Similarity=0.071 Sum_probs=73.0
Q ss_pred CCCCeEEEEecchhHHHHHHHhc----------------CCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEcc
Q 019550 104 QNPKTVFIMGGGEGSAAREALKH----------------KSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVND 167 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~----------------~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D 167 (339)
+++-+|+|+||++|..+..+... .|.-+|...|+-..-....-+.++... ...+-.++.+.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~---~~~~~~f~~gv 126 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN---DVDGVCFINGV 126 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC---SCTTCEEEEEE
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc---ccCCCEEEEec
Confidence 55678999999999755433321 345678888887777776666654321 11134666777
Q ss_pred HHHHHHh--cCCceeEEEecCCCCCCCCcc--------------------ccCCcH-------HHHHHHHccccCCCcEE
Q 019550 168 AKAELEK--RNEKFDVIFGDLADPVEGGPC--------------------YQLYTK-------SFYERILKPKLNDNGIF 218 (339)
Q Consensus 168 ~~~~l~~--~~~~yDvIi~D~~d~~~~~p~--------------------~~L~t~-------ef~~~~~~~~L~~gGil 218 (339)
+..|-.+ ..+++|+|++...-.|-...+ ...|.. .|++. .++.|+|||.+
T Consensus 127 pgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~-Ra~EL~pGG~m 205 (359)
T 1m6e_X 127 PGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRC-RAQEVVPGGRM 205 (359)
T ss_dssp ESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHH-HHHHBCTTCEE
T ss_pred chhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCceE
Confidence 7666433 257899999988744321111 113332 45666 68999999999
Q ss_pred EEec
Q 019550 219 VTQA 222 (339)
Q Consensus 219 v~~~ 222 (339)
++..
T Consensus 206 vl~~ 209 (359)
T 1m6e_X 206 VLTI 209 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 319
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.63 E-value=0.033 Score=52.92 Aligned_cols=94 Identities=17% Similarity=0.253 Sum_probs=61.7
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
...++||++|+|+ |.++.++++..+ .+|++++.+++-.+.+++. +.. .++...-.++++...+.+|+|
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~~~~~~~~~a~~l-Ga~---------~vi~~~~~~~~~~~~~g~Dvv 261 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMG-AHVVAFTTSEAKREAAKAL-GAD---------EVVNSRNADEMAAHLKSFDFI 261 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHH-TCS---------EEEETTCHHHHHTTTTCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CCc---------EEeccccHHHHHHhhcCCCEE
Confidence 3467899999875 777788888776 4699999999988888874 211 112111123344333679999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+-....+ ..++. +.+.|+++|.++.-
T Consensus 262 id~~g~~------------~~~~~-~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 262 LNTVAAP------------HNLDD-FTTLLKRDGTMTLV 287 (369)
T ss_dssp EECCSSC------------CCHHH-HHTTEEEEEEEEEC
T ss_pred EECCCCH------------HHHHH-HHHHhccCCEEEEe
Confidence 8654422 11344 56789999998754
No 320
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.50 E-value=0.1 Score=48.95 Aligned_cols=97 Identities=13% Similarity=0.085 Sum_probs=62.3
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEE-EccHHHHHHh-c----C
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLV-VNDAKAELEK-R----N 176 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~-~~D~~~~l~~-~----~ 176 (339)
...++||++|+|+ |..+..+++..+. +|++++.+++-.+.+++.-... . +... ..|..+.+.. . .
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~--~-----~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADV--T-----LVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSE--E-----EECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCE--E-----EcCcccccHHHHHHHHhccccC
Confidence 3467899999875 7777788887764 5999999999999988652110 0 0000 0233333332 2 2
Q ss_pred CceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 177 EKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 177 ~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+.+|+|+-.... .+.++. +.+.|+++|.++.-
T Consensus 239 ~g~D~vid~~g~------------~~~~~~-~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 239 DLPNVTIDCSGN------------EKCITI-GINITRTGGTLMLV 270 (352)
T ss_dssp SCCSEEEECSCC------------HHHHHH-HHHHSCTTCEEEEC
T ss_pred CCCCEEEECCCC------------HHHHHH-HHHHHhcCCEEEEE
Confidence 569999865431 134555 56789999998864
No 321
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.42 E-value=0.089 Score=49.77 Aligned_cols=99 Identities=14% Similarity=0.155 Sum_probs=63.4
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEE
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvI 182 (339)
..++||++|+|+ |..+..+++..+..+|++++.+++-.+.++++-... .++.... ..|..+.++. ..+.+|+|
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~--vi~~~~~---~~~~~~~~~~~~~~g~D~v 266 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD--FVNPNDH---SEPISQVLSKMTNGGVDFS 266 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCE--EECGGGC---SSCHHHHHHHHHTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCce--EEecccc---chhHHHHHHHHhCCCCCEE
Confidence 457899999865 677788888777668999999999999888652110 0000000 0233344433 23479999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCC-cEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDN-GIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~g-Gilv~~ 221 (339)
|-... + .+.++. +.+.|+++ |.++.-
T Consensus 267 id~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 267 LECVG-----N-------VGVMRN-ALESCLKGWGVSVLV 293 (374)
T ss_dssp EECSC-----C-------HHHHHH-HHHTBCTTTCEEEEC
T ss_pred EECCC-----C-------HHHHHH-HHHHhhcCCcEEEEE
Confidence 85443 1 144566 57899999 998864
No 322
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.42 E-value=0.055 Score=51.37 Aligned_cols=101 Identities=18% Similarity=0.185 Sum_probs=65.9
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeE
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDv 181 (339)
...++||++|+|. |.++..+++..+..+|++++.+++-++++++.-... .++... ...|..+.++. +.+.+|+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~--vi~~~~---~~~~~~~~i~~~~~gg~D~ 266 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNE--FVNPKD---HDKPIQEVIVDLTDGGVDY 266 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCE--EECGGG---CSSCHHHHHHHHTTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcE--EEcccc---CchhHHHHHHHhcCCCCCE
Confidence 3467899999874 777888888777668999999999999988752110 000000 01344444543 3458999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCC-cEEEEec
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDN-GIFVTQA 222 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~g-Gilv~~~ 222 (339)
|+-.... .+.++. +.+.|+++ |.+++-.
T Consensus 267 vid~~g~------------~~~~~~-~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 267 SFECIGN------------VSVMRA-ALECCHKGWGTSVIVG 295 (378)
T ss_dssp EEECSCC------------HHHHHH-HHHTBCTTTCEEEECS
T ss_pred EEECCCC------------HHHHHH-HHHHhhccCCEEEEEc
Confidence 9865431 245666 67899997 9988643
No 323
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.41 E-value=0.045 Score=51.55 Aligned_cols=94 Identities=14% Similarity=0.155 Sum_probs=60.4
Q ss_pred CeEEEEecch-hHHH-HHHH-hcCCCCEEEEEEcCHH---HHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCcee
Q 019550 107 KTVFIMGGGE-GSAA-REAL-KHKSLEKVVMCDIDQE---VVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFD 180 (339)
Q Consensus 107 ~~VL~IG~G~-G~~~-~~l~-~~~~~~~v~~VEid~~---vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yD 180 (339)
++||++|+|+ |.++ .+++ +..+..+|++++.+++ -.+.+++.-...- ... ..|..+ +....+.+|
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~-------~~~~~~-i~~~~gg~D 244 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSR-------QTPVED-VPDVYEQMD 244 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETT-------TSCGGG-HHHHSCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCC-------ccCHHH-HHHhCCCCC
Confidence 7999999753 6677 7888 8777656999999987 7788876421100 011 123333 332233799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|+-... + .+.++. +.+.|+++|.++.-.
T Consensus 245 vvid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 245 FIYEATG-----F-------PKHAIQ-SVQALAPNGVGALLG 273 (357)
T ss_dssp EEEECSC-----C-------HHHHHH-HHHHEEEEEEEEECC
T ss_pred EEEECCC-----C-------hHHHHH-HHHHHhcCCEEEEEe
Confidence 9875432 1 134566 567899999988643
No 324
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.28 E-value=0.093 Score=49.64 Aligned_cols=99 Identities=11% Similarity=0.026 Sum_probs=63.5
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEE
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvI 182 (339)
..++||++|+|+ |.++..+++..+..+|++++.+++-.+.+++.-... .++.... ..|..+.++. +.+.+|+|
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~--vi~~~~~---~~~~~~~i~~~t~gg~Dvv 265 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE--CLNPKDY---DKPIYEVICEKTNGGVDYA 265 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSE--EECGGGC---SSCHHHHHHHHTTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcE--EEecccc---cchHHHHHHHHhCCCCCEE
Confidence 457899999875 667778888777668999999999888888652110 0000000 0234444433 23479999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCC-cEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDN-GIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~g-Gilv~~ 221 (339)
+--.. + .+.++. +.+.|+++ |.++.-
T Consensus 266 id~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 266 VECAG-----R-------IETMMN-ALQSTYCGSGVTVVL 292 (373)
T ss_dssp EECSC-----C-------HHHHHH-HHHTBCTTTCEEEEC
T ss_pred EECCC-----C-------HHHHHH-HHHHHhcCCCEEEEE
Confidence 85443 1 244566 57899999 998764
No 325
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.26 E-value=0.11 Score=49.21 Aligned_cols=99 Identities=12% Similarity=0.075 Sum_probs=63.5
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEE
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvI 182 (339)
..++||++|+|. |.++..+++..+..+|++++.+++-.+.++++-... .++.... ..|..+.+.. +.+.+|+|
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~--vi~~~~~---~~~~~~~v~~~~~~g~Dvv 269 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATD--CLNPREL---DKPVQDVITELTAGGVDYS 269 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSE--EECGGGC---SSCHHHHHHHHHTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcE--EEccccc---cchHHHHHHHHhCCCccEE
Confidence 457899999864 677778888877668999999999888888652110 0000000 0233444433 23479998
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCC-cEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDN-GIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~g-Gilv~~ 221 (339)
+-... + .+.++. +.+.|+++ |.+++-
T Consensus 270 id~~G-----~-------~~~~~~-~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 270 LDCAG-----T-------AQTLKA-AVDCTVLGWGSCTVV 296 (376)
T ss_dssp EESSC-----C-------HHHHHH-HHHTBCTTTCEEEEC
T ss_pred EECCC-----C-------HHHHHH-HHHHhhcCCCEEEEE
Confidence 85443 1 244666 57899999 998864
No 326
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.23 E-value=0.079 Score=49.38 Aligned_cols=99 Identities=18% Similarity=0.147 Sum_probs=65.5
Q ss_pred CCCCeEEEEecchh-HHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc--CCcee
Q 019550 104 QNPKTVFIMGGGEG-SAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR--NEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~G-~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~yD 180 (339)
...++||++|+|++ .++..+++.....+|++++.+++=.+++++.-... -+.....|..+.+... ...+|
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~-------~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADV-------TINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSE-------EEEC-CCCHHHHHHHHTTSSCEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeE-------EEeCCCCCHHHHhhhhcCCCCce
Confidence 34578999999864 45556666666789999999999888888763211 1222234555555443 24578
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+++.+... .+.+.. +.+.|+++|.+++-.
T Consensus 235 ~~~~~~~~------------~~~~~~-~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 235 SAIVCAVA------------RIAFEQ-AVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEECCSC------------HHHHHH-HHHTEEEEEEEEECC
T ss_pred EEEEeccC------------cchhhe-eheeecCCceEEEEe
Confidence 88877542 144555 567999999988654
No 327
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.23 E-value=0.085 Score=49.79 Aligned_cols=93 Identities=12% Similarity=0.064 Sum_probs=62.3
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEE---ccHHHHHHh-c-CCc
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVV---NDAKAELEK-R-NEK 178 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~---~D~~~~l~~-~-~~~ 178 (339)
..++||++|+|+ |..+..+++..+. +|++++.+++-.+.+++.-. . .++. .|..+.+.. + ...
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-~---------~vi~~~~~~~~~~v~~~~~g~g 257 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGA-D---------HGINRLEEDWVERVYALTGDRG 257 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTC-S---------EEEETTTSCHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCC-C---------EEEcCCcccHHHHHHHHhCCCC
Confidence 457899999875 7777888887764 89999999999898887521 1 1111 233444433 2 347
Q ss_pred eeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 179 FDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 179 yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|+|+-... + . .++. +.+.|+++|.+++-.
T Consensus 258 ~D~vid~~g-~----~--------~~~~-~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 258 ADHILEIAG-G----A--------GLGQ-SLKAVAPDGRISVIG 287 (363)
T ss_dssp EEEEEEETT-S----S--------CHHH-HHHHEEEEEEEEEEC
T ss_pred ceEEEECCC-h----H--------HHHH-HHHHhhcCCEEEEEe
Confidence 999886554 1 1 1344 457899999988654
No 328
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.22 E-value=0.028 Score=50.84 Aligned_cols=46 Identities=24% Similarity=0.210 Sum_probs=40.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhh
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTV 151 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~ 151 (339)
.+...|||..||+|+++.++.+. ..+.+++|+++..++++++.+..
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHh
Confidence 45678999999999999998874 37899999999999999998754
No 329
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.18 E-value=0.18 Score=47.85 Aligned_cols=99 Identities=20% Similarity=0.335 Sum_probs=58.4
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+++||++|+|. |..+..+++..+. +|+++|.+++-.+.+++.+.. .+.++..+..++.+. -..+|+||
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~--------~~~~~~~~~~~~~~~-~~~~DvVI 235 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS--------RVELLYSNSAEIETA-VAEADLLI 235 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG--------GSEEEECCHHHHHHH-HHTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc--------eeEeeeCCHHHHHHH-HcCCCEEE
Confidence 458999999863 3334455555665 899999999988887765432 122232222222111 13589998
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
.....+. .+...+.+.+ ..+.|+++|+++-
T Consensus 236 ~~~~~~~--~~~~~li~~~-----~~~~~~~g~~ivd 265 (361)
T 1pjc_A 236 GAVLVPG--RRAPILVPAS-----LVEQMRTGSVIVD 265 (361)
T ss_dssp ECCCCTT--SSCCCCBCHH-----HHTTSCTTCEEEE
T ss_pred ECCCcCC--CCCCeecCHH-----HHhhCCCCCEEEE
Confidence 7665432 1222444443 2356889998764
No 330
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.17 E-value=0.11 Score=49.13 Aligned_cols=99 Identities=13% Similarity=0.168 Sum_probs=63.3
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEE
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvI 182 (339)
..++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++.-... .++.... ..|..+.++. ..+.+|+|
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~--vi~~~~~---~~~~~~~v~~~~~~g~D~v 264 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE--CINPQDF---SKPIQEVLIEMTDGGVDYS 264 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSE--EECGGGC---SSCHHHHHHHHTTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCce--Eeccccc---cccHHHHHHHHhCCCCCEE
Confidence 457899999865 667778888777668999999999889888652110 0000000 0234444433 23479998
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCC-cEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDN-GIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~g-Gilv~~ 221 (339)
+-... + .+.++. +.+.|+++ |.++.-
T Consensus 265 id~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 265 FECIG-----N-------VKVMRA-ALEACHKGWGVSVVV 291 (373)
T ss_dssp EECSC-----C-------HHHHHH-HHHTBCTTTCEEEEC
T ss_pred EECCC-----c-------HHHHHH-HHHhhccCCcEEEEE
Confidence 85543 1 244566 57899999 998864
No 331
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.16 E-value=0.097 Score=49.53 Aligned_cols=99 Identities=13% Similarity=0.145 Sum_probs=63.3
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEE
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvI 182 (339)
..++||++|+|+ |..+..+++..+..+|++++.+++-.+.+++.-... .++.... ..|..+.++. ..+.+|+|
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~--vi~~~~~---~~~~~~~~~~~~~~g~D~v 265 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE--CVNPQDY---KKPIQEVLTEMSNGGVDFS 265 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSE--EECGGGC---SSCHHHHHHHHTTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCce--Eeccccc---chhHHHHHHHHhCCCCcEE
Confidence 457899999875 777778888777668999999999888887652110 0000000 0233444433 23479998
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCC-cEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDN-GIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~g-Gilv~~ 221 (339)
+-.... .+.++. +.+.|+++ |.++.-
T Consensus 266 id~~g~------------~~~~~~-~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 266 FEVIGR------------LDTMVT-ALSCCQEAYGVSVIV 292 (374)
T ss_dssp EECSCC------------HHHHHH-HHHHBCTTTCEEEEC
T ss_pred EECCCC------------HHHHHH-HHHHhhcCCcEEEEe
Confidence 755431 144566 56789999 998764
No 332
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.15 E-value=0.084 Score=50.21 Aligned_cols=94 Identities=15% Similarity=0.151 Sum_probs=61.9
Q ss_pred CCCeEEEEecc-hhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEE------ccHHHHHHhc-C
Q 019550 105 NPKTVFIMGGG-EGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVV------NDAKAELEKR-N 176 (339)
Q Consensus 105 ~p~~VL~IG~G-~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~------~D~~~~l~~~-~ 176 (339)
..++||++|+| -|..+..+++..+..+|++++.+++-.+.++++- . . .++. .|..+.++.. .
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG-a-------~--~vi~~~~~~~~~~~~~v~~~~~ 264 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIG-A-------D--LTLNRRETSVEERRKAIMDITH 264 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTT-C-------S--EEEETTTSCHHHHHHHHHHHTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcC-C-------c--EEEeccccCcchHHHHHHHHhC
Confidence 45789999965 4667778888776569999999999999888642 1 0 1221 2333334332 2
Q ss_pred -CceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 177 -EKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 177 -~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
..+|+|+-....+ +.++. +.+.|+++|.++.-
T Consensus 265 g~g~Dvvid~~g~~------------~~~~~-~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 265 GRGADFILEATGDS------------RALLE-GSELLRRGGFYSVA 297 (380)
T ss_dssp TSCEEEEEECSSCT------------THHHH-HHHHEEEEEEEEEC
T ss_pred CCCCcEEEECCCCH------------HHHHH-HHHHHhcCCEEEEE
Confidence 3699998654321 23455 56789999998764
No 333
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.14 E-value=0.063 Score=51.37 Aligned_cols=109 Identities=13% Similarity=0.145 Sum_probs=65.9
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccH-HHHHHh-cC-Cce
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDA-KAELEK-RN-EKF 179 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~-~~~l~~-~~-~~y 179 (339)
...++||++|+|+ |.++..+++..+..+|++++.+++-++.++++-. . . +.....|. .+.++. +. ..+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-~--~-----i~~~~~~~~~~~~~~~~~g~g~ 255 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGF-E--T-----IDLRNSAPLRDQIDQILGKPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTC-E--E-----EETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-c--E-----EcCCCcchHHHHHHHHhCCCCC
Confidence 3457899999886 7888888887776699999999999998886521 1 0 11011232 333433 22 369
Q ss_pred eEEEecCCCCCCCC-c-cccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 180 DVIFGDLADPVEGG-P-CYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 180 DvIi~D~~d~~~~~-p-~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
|+||-....+.... + ..++-..+.++. +.+.|+++|.+++-
T Consensus 256 Dvvid~~g~~~~~~~~~~~~~~~~~~~~~-~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 256 DCGVDAVGFEAHGLGDEANTETPNGALNS-LFDVVRAGGAIGIP 298 (398)
T ss_dssp EEEEECSCTTCBCSGGGTTSBCTTHHHHH-HHHHEEEEEEEECC
T ss_pred CEEEECCCCccccccccccccccHHHHHH-HHHHHhcCCEEEEe
Confidence 99976554221000 0 000001234666 57799999998754
No 334
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.11 E-value=0.1 Score=50.03 Aligned_cols=99 Identities=17% Similarity=0.235 Sum_probs=63.4
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-C-CceeE
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-N-EKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~-~~yDv 181 (339)
..++||++|+|+ |.++..+++..+..+|++++.+++-.++++++-... .++.. ..|..+.+... . ..+|+
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~--vi~~~-----~~~~~~~i~~~t~g~g~D~ 285 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADH--VIDPT-----KENFVEAVLDYTNGLGAKL 285 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE--EECTT-----TSCHHHHHHHHTTTCCCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE--EEcCC-----CCCHHHHHHHHhCCCCCCE
Confidence 457899999865 777788888887769999999999999998763110 01110 13444445442 2 46999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHcccc----CCCcEEEEec
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKL----NDNGIFVTQA 222 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L----~~gGilv~~~ 222 (339)
|+-....+ ...++. +.+.| +++|.+++-.
T Consensus 286 vid~~g~~-----------~~~~~~-~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 286 FLEATGVP-----------QLVWPQ-IEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EEECSSCH-----------HHHHHH-HHHHHHHCSCCCCEEEECS
T ss_pred EEECCCCc-----------HHHHHH-HHHHHHhccCCCcEEEEeC
Confidence 98544311 123343 34455 9999998753
No 335
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.04 E-value=0.021 Score=53.48 Aligned_cols=67 Identities=18% Similarity=0.209 Sum_probs=47.5
Q ss_pred CCCCeEEEEccHHHHHHhc-CCceeEEEecCCCCCCCCcc-cc-------CCcHHHHHHHHccccCCCcEEEEecCC
Q 019550 157 CSKKLNLVVNDAKAELEKR-NEKFDVIFGDLADPVEGGPC-YQ-------LYTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 157 ~~~rv~v~~~D~~~~l~~~-~~~yDvIi~D~~d~~~~~p~-~~-------L~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
...+.+++.+|+++.|+.. .+++|+|++|||-.....-. .. -+..+.++. +++.|+|||.++++.+.
T Consensus 11 ~~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~-~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 11 TTSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKV-VNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp ECSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEECC
T ss_pred ecCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHH-HHHHCcCCcEEEEEECC
Confidence 4678899999999988754 46899999999843210000 00 023466777 68999999999998653
No 336
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.90 E-value=0.11 Score=49.54 Aligned_cols=107 Identities=13% Similarity=0.157 Sum_probs=66.0
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEcc-HHHHHHh-cC-Ccee
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVND-AKAELEK-RN-EKFD 180 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D-~~~~l~~-~~-~~yD 180 (339)
..++||++|+|+ |.++.++++..+..+|++++.+++-++.++++-. . . +.....| ..+.++. +. ..+|
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa-~--~-----i~~~~~~~~~~~v~~~t~g~g~D 256 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF-E--I-----ADLSLDTPLHEQIAALLGEPEVD 256 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-E--E-----EETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC-c--E-----EccCCcchHHHHHHHHhCCCCCC
Confidence 457899999876 7788888888876689999999999999987521 0 0 0000112 3334433 22 4699
Q ss_pred EEEecCCCCCCCCc----cccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 181 VIFGDLADPVEGGP----CYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p----~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+|+-....+.. +. .......+.++. +.+.|+++|.+++-
T Consensus 257 vvid~~G~~~~-~~~~~~~~~~~~~~~~~~-~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 257 CAVDAVGFEAR-GHGHEGAKHEAPATVLNS-LMQVTRVAGKIGIP 299 (398)
T ss_dssp EEEECCCTTCB-CSSTTGGGSBCTTHHHHH-HHHHEEEEEEEEEC
T ss_pred EEEECCCCccc-ccccccccccchHHHHHH-HHHHHhcCCEEEEe
Confidence 99865542210 00 000111235666 56899999998764
No 337
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.86 E-value=0.023 Score=51.41 Aligned_cols=62 Identities=10% Similarity=0.104 Sum_probs=43.6
Q ss_pred CeEEEEccHHHHHHhcC-CceeEEEecCCCCCCCCccccC--------CcHHHHHHHHccccCCCcEEEEec
Q 019550 160 KLNLVVNDAKAELEKRN-EKFDVIFGDLADPVEGGPCYQL--------YTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 160 rv~v~~~D~~~~l~~~~-~~yDvIi~D~~d~~~~~p~~~L--------~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
..+++++|+.++|+... +++|+|++|||-.....--... +..+.++. +++.|+|+|+++++.
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~-~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDK-VLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHH-HHHHhcCCeEEEEEc
Confidence 35689999999998754 6899999999853310000011 23466777 689999999998874
No 338
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.80 E-value=0.081 Score=49.55 Aligned_cols=97 Identities=14% Similarity=0.110 Sum_probs=63.4
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc--CCceeE
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR--NEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~yDv 181 (339)
..++||++|+|+ |..+..+++..+..+|++++.+++-.+.+++.-... .+ +.+ ..|..+.+... ...+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~--~~-~~~----~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY--VI-NPF----EEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE--EE-CTT----TSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE--EE-CCC----CcCHHHHHHHHcCCCCCCE
Confidence 457899999864 677777888777558999999999888888652110 00 010 13444444432 246999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
|+-.... .+.++. +.+.|+++|.++.-
T Consensus 240 vid~~g~------------~~~~~~-~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 240 FLEFSGA------------PKALEQ-GLQAVTPAGRVSLL 266 (348)
T ss_dssp EEECSCC------------HHHHHH-HHHHEEEEEEEEEC
T ss_pred EEECCCC------------HHHHHH-HHHHHhcCCEEEEE
Confidence 9865431 244566 56789999998764
No 339
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=94.79 E-value=0.81 Score=49.20 Aligned_cols=152 Identities=8% Similarity=0.027 Sum_probs=96.8
Q ss_pred CCeEEEEecchhHHHHHHHhcCCC-CEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh----------
Q 019550 106 PKTVFIMGGGEGSAAREALKHKSL-EKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK---------- 174 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~---------- 174 (339)
+-++++|-||.|++...+.+ .+. .-+.++|+|+..++.-+.++ |...++.+|..+++..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~-AG~~~vv~avEid~~A~~ty~~N~---------p~~~~~~~DI~~l~~~~~~~di~~~~ 609 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQ-AGISDTLWAIEMWDPAAQAFRLNN---------PGSTVFTEDCNILLKLVMAGETTNSR 609 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHH-HTSEEEEEEECSSHHHHHHHHHHC---------TTSEEECSCHHHHHHHHHHTCSBCTT
T ss_pred CCeEEEeccCccHHHHHHHH-CCCCceEEEEECCHHHHHHHHHhC---------CCCccccccHHHHhhhccchhhhhhh
Confidence 34799999999999887765 454 45789999999999888775 3456788887765421
Q ss_pred -----cCCceeEEEecCCC-CCC-CCcc---------ccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHH
Q 019550 175 -----RNEKFDVIFGDLAD-PVE-GGPC---------YQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIY 238 (339)
Q Consensus 175 -----~~~~yDvIi~D~~d-~~~-~~p~---------~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~ 238 (339)
..+..|+|+.-++- +.. .+.. ..| -.+|++. + +.++|.-+++=|+.....+.....+..+.
T Consensus 610 ~~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L-~~~~~ri-v-~~~rPk~~llENV~glls~~~~~~~~~i~ 686 (1002)
T 3swr_A 610 GQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSL-VVSFLSY-C-DYYRPRFFLLENVRNFVSFKRSMVLKLTL 686 (1002)
T ss_dssp CCBCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSH-HHHHHHH-H-HHHCCSEEEEEEEGGGGTTGGGHHHHHHH
T ss_pred hhhcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHH-HHHHHHH-H-HHhCCCEEEEeccHHHhccCcchHHHHHH
Confidence 11368999998873 221 0110 011 2356664 4 57899877776652110012234677888
Q ss_pred HHHHhHCCceEEEEEeecccC----CceeEEEEecC
Q 019550 239 NTIKQVFKHVVAYTAHVPSFA----DTWGWVMASDQ 270 (339)
Q Consensus 239 ~~l~~~F~~v~~~~~~iP~~~----~~~~~~~as~~ 270 (339)
+.|.+..-.+....+.-..|| ..-.|++|++.
T Consensus 687 ~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fiva~r~ 722 (1002)
T 3swr_A 687 RCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 722 (1002)
T ss_dssp HHHHHHTCEEEEEEEEGGGGTCSBCCEEEEEEEECT
T ss_pred HHHHhcCCeEEEEEEEHHHCCCCccceEEEEEEEeC
Confidence 888888777765555444454 22347888753
No 340
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.75 E-value=0.089 Score=49.01 Aligned_cols=99 Identities=16% Similarity=0.113 Sum_probs=64.3
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc--CCcee
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR--NEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~yD 180 (339)
...++||++|+|+ |.++..+++..+...+++++.+++=.++++++-... -+.....|..+.++.. ...+|
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~-------~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQ-------TFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSE-------EEETTTSCHHHHHHHHGGGCSSE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeE-------EEeCCCCCHHHHHHhhcccCCcc
Confidence 3567899999875 556677788888888999999999999998863211 0111112333433322 24578
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|+-... ..+.++. +.+.|+++|.+++-.
T Consensus 232 ~v~d~~G------------~~~~~~~-~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 232 LILETAG------------VPQTVEL-AVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEECSC------------SHHHHHH-HHHHCCTTCEEEECC
T ss_pred ccccccc------------ccchhhh-hhheecCCeEEEEEe
Confidence 7765432 1245666 567999999998754
No 341
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.72 E-value=0.053 Score=50.81 Aligned_cols=90 Identities=18% Similarity=0.143 Sum_probs=61.6
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
...++||++|+|+ |.++.++++..+. +|++++.+++-.+.+++. +. . .++ .|. +.+ .+.+|+|
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga-------~--~v~-~~~-~~~---~~~~D~v 238 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSM-GV-------K--HFY-TDP-KQC---KEELDFI 238 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHT-TC-------S--EEE-SSG-GGC---CSCEEEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhc-CC-------C--eec-CCH-HHH---hcCCCEE
Confidence 3567899999876 7788888887765 899999999988888874 21 1 122 332 112 2379999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+-....+ +.++. +.+.|+++|.++.-.
T Consensus 239 id~~g~~------------~~~~~-~~~~l~~~G~iv~~G 265 (348)
T 3two_A 239 ISTIPTH------------YDLKD-YLKLLTYNGDLALVG 265 (348)
T ss_dssp EECCCSC------------CCHHH-HHTTEEEEEEEEECC
T ss_pred EECCCcH------------HHHHH-HHHHHhcCCEEEEEC
Confidence 8654422 12455 568999999998643
No 342
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.58 E-value=0.19 Score=40.63 Aligned_cols=95 Identities=16% Similarity=0.122 Sum_probs=58.9
Q ss_pred CCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHH--HHHhc-CCceeE
Q 019550 106 PKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA--ELEKR-NEKFDV 181 (339)
Q Consensus 106 p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~--~l~~~-~~~yDv 181 (339)
..+|+++|+|. |......++..+ .+|+++|.|++.++.+++. .+.++.+|+.+ .++.. -+..|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g-~~v~vid~~~~~~~~~~~~-----------g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD-IPLVVIETSRTRVDELRER-----------GVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHT-----------TCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHHc-----------CCCEEECCCCCHHHHHhcCcccCCE
Confidence 35799999984 333333333343 5799999999988876642 35678888753 35443 257999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
|++-.++.. . +..... ..+.+.|+..++...
T Consensus 75 vi~~~~~~~-----~---n~~~~~--~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 75 LILTIPNGY-----E---AGEIVA--SARAKNPDIEIIARA 105 (140)
T ss_dssp EEECCSCHH-----H---HHHHHH--HHHHHCSSSEEEEEE
T ss_pred EEEECCChH-----H---HHHHHH--HHHHHCCCCeEEEEE
Confidence 998876432 0 111222 245677887666543
No 343
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.54 E-value=0.093 Score=49.03 Aligned_cols=93 Identities=13% Similarity=0.108 Sum_probs=60.4
Q ss_pred CCCeEEEEecch-hHHHHHHHhcC--CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccH-HHHHHh-c-CCc
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHK--SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDA-KAELEK-R-NEK 178 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~--~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~-~~~l~~-~-~~~ 178 (339)
..++||++|+|+ |..+.++++.. + .+|++++.+++-.+.+++. ... +++..+- .+++.. . ...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~G-a~Vi~~~~~~~~~~~~~~l-Ga~---------~vi~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKN-ITIVGISRSKKHRDFALEL-GAD---------YVSEMKDAESLINKLTDGLG 238 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTT-CEEEEECSCHHHHHHHHHH-TCS---------EEECHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCC-CEEEEEeCCHHHHHHHHHh-CCC---------EEeccccchHHHHHhhcCCC
Confidence 467899999864 66777777766 6 5799999999988888874 211 1121111 122222 1 347
Q ss_pred eeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 179 FDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 179 yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+|+|+-.... .+.++. +.+.|+++|.++.-
T Consensus 239 ~D~vid~~g~------------~~~~~~-~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 239 ASIAIDLVGT------------EETTYN-LGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEEESSCC------------HHHHHH-HHHHEEEEEEEEEC
T ss_pred ccEEEECCCC------------hHHHHH-HHHHhhcCCEEEEe
Confidence 9999865431 134566 56789999998764
No 344
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.43 E-value=0.057 Score=50.50 Aligned_cols=96 Identities=15% Similarity=0.168 Sum_probs=62.0
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEE
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvI 182 (339)
..++||++|+|+ |..+..+++..+..+|++++.+++-.+.++++ ... .++.. ..|..+.++. +.+.+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~--v~~~~-----~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADR--LVNPL-----EEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSE--EECTT-----TSCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHh--ccCcC-----ccCHHHHHHHhcCCCCCEE
Confidence 467899999754 67777888877655899999999888877764 211 11111 1233333332 24579999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+-.... .+.++. +.+.|+++|.++.-
T Consensus 236 id~~g~------------~~~~~~-~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 236 LEFSGN------------EAAIHQ-GLMALIPGGEARIL 261 (343)
T ss_dssp EECSCC------------HHHHHH-HHHHEEEEEEEEEC
T ss_pred EECCCC------------HHHHHH-HHHHHhcCCEEEEE
Confidence 865431 144566 56789999998764
No 345
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.42 E-value=0.49 Score=43.92 Aligned_cols=90 Identities=17% Similarity=0.175 Sum_probs=58.0
Q ss_pred CCeEEEEecc--hhHHHHHHHhcCCC-CEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHH-HHHhcCCceeE
Q 019550 106 PKTVFIMGGG--EGSAAREALKHKSL-EKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA-ELEKRNEKFDV 181 (339)
Q Consensus 106 p~~VL~IG~G--~G~~~~~l~~~~~~-~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~-~l~~~~~~yDv 181 (339)
..+|.+||+| ++.+++.+.+ .+. .+|+++|.+++.++.+++.- . +.-...|..+ .+ +..|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~-~G~~~~V~~~dr~~~~~~~a~~~G-~---------~~~~~~~~~~~~~----~~aDv 97 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR-SGFKGKIYGYDINPESISKAVDLG-I---------IDEGTTSIAKVED----FSPDF 97 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH-TTCCSEEEEECSCHHHHHHHHHTT-S---------CSEEESCTTGGGG----GCCSE
T ss_pred CCEEEEEeeCHHHHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHCC-C---------cchhcCCHHHHhh----ccCCE
Confidence 3689999999 4555665655 332 38999999999888776531 1 0012233322 22 35899
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
||+-.+.. ...+.++. +...|+++.+++-
T Consensus 98 Vilavp~~---------~~~~vl~~-l~~~l~~~~iv~d 126 (314)
T 3ggo_A 98 VMLSSPVR---------TFREIAKK-LSYILSEDATVTD 126 (314)
T ss_dssp EEECSCGG---------GHHHHHHH-HHHHSCTTCEEEE
T ss_pred EEEeCCHH---------HHHHHHHH-HhhccCCCcEEEE
Confidence 99987632 14577788 6778888876653
No 346
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.41 E-value=0.13 Score=48.02 Aligned_cols=97 Identities=18% Similarity=0.187 Sum_probs=61.9
Q ss_pred CCCCeEEEEecc-hhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGG-EGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G-~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
...++||++|+| -|..+..+++..+ .+|++++.+++-.+.+++. .... .+ +.+ ..|..+.+....+.+|+|
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~l-Ga~~-~~-d~~----~~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKEL-GADL-VV-NPL----KEDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT-TCSE-EE-CTT----TSCHHHHHHHHHSSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHC-CCCE-Ee-cCC----CccHHHHHHHHhCCCCEE
Confidence 346789999986 3677777787776 4899999999999988764 2110 00 000 123333333221579999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+-.... .+.++. +.+.|+++|.++.-
T Consensus 235 id~~g~------------~~~~~~-~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 235 VVTAVS------------KPAFQS-AYNSIRRGGACVLV 260 (339)
T ss_dssp EESSCC------------HHHHHH-HHHHEEEEEEEEEC
T ss_pred EECCCC------------HHHHHH-HHHHhhcCCEEEEe
Confidence 865431 134555 56789999998764
No 347
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.38 E-value=0.073 Score=52.78 Aligned_cols=128 Identities=11% Similarity=0.060 Sum_probs=84.3
Q ss_pred CCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHH------------
Q 019550 106 PKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELE------------ 173 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~------------ 173 (339)
.-++++|.||.|++...+.+ .+..-|.++|+|+...+.-+.++.. .|...++.+|..++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~-aG~~~v~avE~d~~A~~ty~~N~~~------~p~~~~~~~DI~~i~~~~~~~~~~~~~~ 160 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFES-IGGQCVFTSEWNKHAVRTYKANHYC------DPATHHFNEDIRDITLSHQEGVSDEAAA 160 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHT-TTEEEEEEECCCHHHHHHHHHHSCC------CTTTCEEESCTHHHHCTTCTTSCHHHHH
T ss_pred cceEEEecCCccHHHHHHHH-CCCEEEEEEeCCHHHHHHHHHhccc------CCCcceeccchhhhhhccccccchhhHH
Confidence 35799999999999988776 4556689999999999988888742 2555678899888752
Q ss_pred ----hcCCceeEEEecCCC-CCC-CC----------------ccccCCcHHHHHHHHccccCCCcEEEEecCCCCccC--
Q 019550 174 ----KRNEKFDVIFGDLAD-PVE-GG----------------PCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFT-- 229 (339)
Q Consensus 174 ----~~~~~yDvIi~D~~d-~~~-~~----------------p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~-- 229 (339)
.....+|+|+..+|- +.+ .+ +-..| -.++++. + +.++|.-+++=|+.. +..
T Consensus 161 ~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~L-f~e~~ri-I-~~~rPk~fvlENV~g--l~s~~ 235 (482)
T 3me5_A 161 EHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTL-FFDVVRI-I-DARRPAMFVLENVKN--LKSHD 235 (482)
T ss_dssp HHHHHHSCCCSEEEEECCCCCC------------------CTTTTSH-HHHHHHH-H-HHHCCSEEEEEEETT--TTTGG
T ss_pred hhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccH-HHHHHHH-H-HHcCCcEEEEeCcHH--Hhccc
Confidence 123568999998873 111 01 10112 2456664 3 468898776656532 222
Q ss_pred chhhHHHHHHHHHhHC
Q 019550 230 HKEVFSSIYNTIKQVF 245 (339)
Q Consensus 230 ~~~~~~~i~~~l~~~F 245 (339)
....+..+.+.|.+..
T Consensus 236 ~g~~f~~i~~~L~~lG 251 (482)
T 3me5_A 236 KGKTFRIIMQTLDELG 251 (482)
T ss_dssp GGHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHhcCC
Confidence 2346777888887654
No 348
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.33 E-value=0.052 Score=51.16 Aligned_cols=94 Identities=16% Similarity=0.124 Sum_probs=59.7
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHH-HHHHhcCCceeE
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAK-AELEKRNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~-~~l~~~~~~yDv 181 (339)
...++||++|+|+ |..+..+++..+. +|++++.+++-.+.+++. ... .++..+-. ++.+...+.+|+
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l-Ga~---------~v~~~~~~~~~~~~~~~~~D~ 246 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM-GAD---------HYIATLEEGDWGEKYFDTFDL 246 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH-TCS---------EEEEGGGTSCHHHHSCSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc-CCC---------EEEcCcCchHHHHHhhcCCCE
Confidence 3467899999754 7777778877664 799999999888888874 211 11211111 223332357999
Q ss_pred EEecCCC--CCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 182 IFGDLAD--PVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 182 Ii~D~~d--~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
|+-.... +. .++. +.+.|+++|.++.-
T Consensus 247 vid~~g~~~~~------------~~~~-~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 247 IVVCASSLTDI------------DFNI-MPKAMKVGGRIVSI 275 (360)
T ss_dssp EEECCSCSTTC------------CTTT-GGGGEEEEEEEEEC
T ss_pred EEECCCCCcHH------------HHHH-HHHHhcCCCEEEEe
Confidence 9866543 21 1233 46789999998754
No 349
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.32 E-value=0.34 Score=46.17 Aligned_cols=97 Identities=15% Similarity=0.294 Sum_probs=58.3
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEc---cHHHHHHhcCCcee
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVN---DAKAELEKRNEKFD 180 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~---D~~~~l~~~~~~yD 180 (339)
.+++|+++|+|. |..+...++..+. +|+++|.+++-++.+++.+.. .+.+... +..+.+ ...|
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~--------~~~~~~~~~~~l~~~l----~~aD 233 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCG--------RIHTRYSSAYELEGAV----KRAD 233 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--------SSEEEECCHHHHHHHH----HHCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCC--------eeEeccCCHHHHHHHH----cCCC
Confidence 468999999863 3333444555664 899999999988877765432 1222221 222333 3589
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|+.....|.. ....+.+.+. -+.|++||+++ +.
T Consensus 234 vVi~~~~~p~~--~t~~li~~~~-----l~~mk~g~~iV-~v 267 (377)
T 2vhw_A 234 LVIGAVLVPGA--KAPKLVSNSL-----VAHMKPGAVLV-DI 267 (377)
T ss_dssp EEEECCCCTTS--CCCCCBCHHH-----HTTSCTTCEEE-EG
T ss_pred EEEECCCcCCC--CCcceecHHH-----HhcCCCCcEEE-EE
Confidence 99986654431 1234555543 34578998876 54
No 350
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.28 E-value=0.05 Score=50.14 Aligned_cols=65 Identities=17% Similarity=0.098 Sum_probs=43.6
Q ss_pred CCCeEEEEccHHHHHHhc-CCceeEEEecCCCCCCCC---ccccC--------C---cHHHHHHHHccccCCCcEEEEec
Q 019550 158 SKKLNLVVNDAKAELEKR-NEKFDVIFGDLADPVEGG---PCYQL--------Y---TKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 158 ~~rv~v~~~D~~~~l~~~-~~~yDvIi~D~~d~~~~~---p~~~L--------~---t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
..+++++++|++++++.. .++||+|++|+|-..... ....+ + -.++++. +.+.|+|||.+++..
T Consensus 19 ~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~-~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWRE-VFRLLVPGGRLVIVV 97 (297)
T ss_dssp --CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHH-HHHHcCCCcEEEEEE
Confidence 467899999999998764 478999999998421000 00000 0 1245667 689999999999886
Q ss_pred C
Q 019550 223 G 223 (339)
Q Consensus 223 ~ 223 (339)
+
T Consensus 98 ~ 98 (297)
T 2zig_A 98 G 98 (297)
T ss_dssp C
T ss_pred C
Confidence 5
No 351
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.26 E-value=0.12 Score=48.95 Aligned_cols=95 Identities=16% Similarity=0.242 Sum_probs=62.5
Q ss_pred CCeEEEEe--cchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-CCceeEE
Q 019550 106 PKTVFIMG--GGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-NEKFDVI 182 (339)
Q Consensus 106 p~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~yDvI 182 (339)
.++||++| +|-|.++..+++.....+|++++.+++-.+.+++. +.. ..++ .+ .|..+.+... .+.+|+|
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l-Gad-~vi~-~~-----~~~~~~v~~~~~~g~Dvv 243 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL-GAH-HVID-HS-----KPLAAEVAALGLGAPAFV 243 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT-TCS-EEEC-TT-----SCHHHHHHTTCSCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc-CCC-EEEe-CC-----CCHHHHHHHhcCCCceEE
Confidence 46799998 34577888888864457999999999988988874 211 0111 11 2344444443 3579988
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+-... ..+.++. +.+.|+++|.+++-
T Consensus 244 id~~g------------~~~~~~~-~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 244 FSTTH------------TDKHAAE-IADLIAPQGRFCLI 269 (363)
T ss_dssp EECSC------------HHHHHHH-HHHHSCTTCEEEEC
T ss_pred EECCC------------chhhHHH-HHHHhcCCCEEEEE
Confidence 75432 1245666 57899999998864
No 352
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.15 E-value=0.18 Score=48.47 Aligned_cols=106 Identities=20% Similarity=0.258 Sum_probs=58.7
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccC------CCCeEEEEc----cHHHHHH
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFC------SKKLNLVVN----DAKAELE 173 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~------~~rv~v~~~----D~~~~l~ 173 (339)
.+.+|++||+|. |..+..+++..+ .+|+++|.++...+.+++. +.....++ ....+-... ....-+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~l-Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG-AKTTGYDVRPEVAEQVRSV-GAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT-CEEEEECSSGGGHHHHHHT-TCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 478999999984 344444555555 5899999999988887763 21000000 000000000 0011222
Q ss_pred hcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEE
Q 019550 174 KRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFV 219 (339)
Q Consensus 174 ~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv 219 (339)
+.-+..|+||.-...|. .+...|.+++.++ .++||.+++
T Consensus 261 e~l~~aDIVI~tv~iPg--~~ap~Lvt~emv~-----~MkpGsVIV 299 (381)
T 3p2y_A 261 DAITKFDIVITTALVPG--RPAPRLVTAAAAT-----GMQPGSVVV 299 (381)
T ss_dssp HHHTTCSEEEECCCCTT--SCCCCCBCHHHHH-----TSCTTCEEE
T ss_pred HHHhcCCEEEECCCCCC--cccceeecHHHHh-----cCCCCcEEE
Confidence 22367999998764443 2234677876544 477877765
No 353
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.06 E-value=0.048 Score=51.10 Aligned_cols=66 Identities=15% Similarity=0.122 Sum_probs=46.1
Q ss_pred CCCeEEE-EccHHHHHHhcC-CceeEEEecCCCCCCCC----ccc-cCCcHHHHHHHHccccCCCcEEEEecCC
Q 019550 158 SKKLNLV-VNDAKAELEKRN-EKFDVIFGDLADPVEGG----PCY-QLYTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 158 ~~rv~v~-~~D~~~~l~~~~-~~yDvIi~D~~d~~~~~----p~~-~L~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
+...+++ ++|++++|+..+ +++|+|++|||-....+ ... .-+..+.+.. +++.|+|||+++++.+.
T Consensus 36 ~~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~-~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 36 GTTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAE-AERVLSPTGSIAIFGGL 108 (319)
T ss_dssp CCEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHH-HHHHEEEEEEEEEEECS
T ss_pred cccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHH-HHHHcCCCeEEEEEcCc
Confidence 4557888 999999997654 68999999998433100 000 0023466777 68999999999998653
No 354
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.84 E-value=0.25 Score=41.91 Aligned_cols=96 Identities=20% Similarity=0.165 Sum_probs=59.0
Q ss_pred CCCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-c-CCce
Q 019550 104 QNPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-R-NEKF 179 (339)
Q Consensus 104 ~~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~-~~~y 179 (339)
...++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++. .. +..+.....|..+.+.. . .+.+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSRL-GV------EYVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHTT-CC------SEEEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------CEEeeCCcHHHHHHHHHHhCCCCC
Confidence 34578999994 55666666666555 5899999999888777653 11 00011111233333333 2 2469
Q ss_pred eEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 180 DVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
|+|+.... + +.++. +.+.|+++|.++.-
T Consensus 109 D~vi~~~g------~-------~~~~~-~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 109 DVVLNSLA------G-------EAIQR-GVQILAPGGRFIEL 136 (198)
T ss_dssp EEEEECCC------T-------HHHHH-HHHTEEEEEEEEEC
T ss_pred eEEEECCc------h-------HHHHH-HHHHhccCCEEEEE
Confidence 99996542 1 34566 57799999998764
No 355
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.77 E-value=0.09 Score=48.72 Aligned_cols=74 Identities=12% Similarity=0.164 Sum_probs=55.3
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCE--EEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc---CCc
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEK--VVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR---NEK 178 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~--v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~---~~~ 178 (339)
..+-++++|-+|.|++...+.+ .+..- |.++|+|+..++..+.+++ ...++.+|..++.... ...
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~-aG~~~~~v~a~E~d~~a~~ty~~N~~---------~~~~~~~DI~~i~~~~i~~~~~ 83 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKD-LGIQVDRYIASEVCEDSITVGMVRHQ---------GKIMYVGDVRSVTQKHIQEWGP 83 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHH-TTBCEEEEEEECCCHHHHHHHHHHTT---------TCEEEECCGGGCCHHHHHHTCC
T ss_pred CCCCEEEEeCcCccHHHHHHHH-CCCccceEEEEECCHHHHHHHHHhCC---------CCceeCCChHHccHHHhcccCC
Confidence 3456899999999999987776 45444 6899999999988887753 3357778877653221 146
Q ss_pred eeEEEecCC
Q 019550 179 FDVIFGDLA 187 (339)
Q Consensus 179 yDvIi~D~~ 187 (339)
+|+|+..++
T Consensus 84 ~Dll~ggpP 92 (295)
T 2qrv_A 84 FDLVIGGSP 92 (295)
T ss_dssp CSEEEECCC
T ss_pred cCEEEecCC
Confidence 999999986
No 356
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.68 E-value=0.16 Score=47.96 Aligned_cols=92 Identities=20% Similarity=0.242 Sum_probs=58.1
Q ss_pred CCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCH---HHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 106 PKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQ---EVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 106 p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~---~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
.++||++|+|+ |..+..+++..+. +|++++.++ +-.+.+++. .. ..+. ..|..+.+....+.+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~-ga-------~~v~--~~~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET-KT-------NYYN--SSNGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH-TC-------EEEE--CTTCSHHHHHHHCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh-CC-------ceec--hHHHHHHHHHhCCCCCE
Confidence 67899999843 5556666666665 899999998 777877764 11 1110 01222333222257999
Q ss_pred EEecCCCCCCCCccccCCcHHHH-HHHHccccCCCcEEEEe
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFY-ERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~-~~~~~~~L~~gGilv~~ 221 (339)
|+-....+ ..+ +. +.+.|+++|.++.-
T Consensus 250 vid~~g~~------------~~~~~~-~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 250 IIDATGAD------------VNILGN-VIPLLGRNGVLGLF 277 (366)
T ss_dssp EEECCCCC------------THHHHH-HGGGEEEEEEEEEC
T ss_pred EEECCCCh------------HHHHHH-HHHHHhcCCEEEEE
Confidence 98765422 234 66 57899999998764
No 357
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.63 E-value=0.39 Score=44.76 Aligned_cols=96 Identities=18% Similarity=0.105 Sum_probs=61.7
Q ss_pred CCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEE-EccHHHHHHh-cCCcee
Q 019550 105 NPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLV-VNDAKAELEK-RNEKFD 180 (339)
Q Consensus 105 ~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~-~~D~~~~l~~-~~~~yD 180 (339)
..++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++. ... .-+.+. ..|..+.+.. ..+.+|
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~~~~~~~-g~~------~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRSI-GGE------VFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHHHHHHHT-TCC------EEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHHHHHHHc-CCc------eEEecCccHhHHHHHHHHhCCCCC
Confidence 4578999998 46677777777666 5899999998887887764 110 000000 1233444433 223799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+|+..... .+.++. +.+.|+++|.++.-
T Consensus 241 ~vi~~~g~------------~~~~~~-~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 241 GVINVSVS------------EAAIEA-STRYVRANGTTVLV 268 (347)
T ss_dssp EEEECSSC------------HHHHHH-HTTSEEEEEEEEEC
T ss_pred EEEECCCc------------HHHHHH-HHHHHhcCCEEEEE
Confidence 99876541 245676 67899999998754
No 358
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.58 E-value=0.23 Score=45.32 Aligned_cols=91 Identities=13% Similarity=0.143 Sum_probs=59.5
Q ss_pred CCCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccH-HHHHHhcCCcee
Q 019550 104 QNPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDA-KAELEKRNEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~-~~~l~~~~~~yD 180 (339)
...++||++|+ |.|..+..+++..+. +|++++.+++-.+.+++. .. . .++..+- .++.+.. +.+|
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~-ga-------~--~~~~~~~~~~~~~~~-~~~d 191 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLAL-GA-------E--EAATYAEVPERAKAW-GGLD 191 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHT-TC-------S--EEEEGGGHHHHHHHT-TSEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc-CC-------C--EEEECCcchhHHHHh-cCce
Confidence 45678999996 457777788887764 899999998888888764 11 1 1222111 2233332 5799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+|+- ...+ .++. +.+.|+++|.++.-
T Consensus 192 ~vid-~g~~-------------~~~~-~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 192 LVLE-VRGK-------------EVEE-SLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEE-CSCT-------------THHH-HHTTEEEEEEEEEC
T ss_pred EEEE-CCHH-------------HHHH-HHHhhccCCEEEEE
Confidence 9987 5321 1455 56789999998754
No 359
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=93.58 E-value=0.11 Score=48.96 Aligned_cols=94 Identities=14% Similarity=0.137 Sum_probs=59.1
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
..++||++|+|+ |..+..+++..+ .+|++++.+++-.+.+++.++.. .+ +-..| .+.+....+.+|+|+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~~~~~~~~~~~~lGa~-------~v-i~~~~-~~~~~~~~~g~D~vi 249 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMG-HHVTVISSSNKKREEALQDLGAD-------DY-VIGSD-QAKMSELADSLDYVI 249 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSTTHHHHHHTTSCCS-------CE-EETTC-HHHHHHSTTTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHcCCc-------ee-ecccc-HHHHHHhcCCCCEEE
Confidence 567899999763 556677777766 48999999988777777443321 11 11112 233444445799988
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
-....+. .++. +.+.|+++|.++.-
T Consensus 250 d~~g~~~------------~~~~-~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 250 DTVPVHH------------ALEP-YLSLLKLDGKLILM 274 (357)
T ss_dssp ECCCSCC------------CSHH-HHTTEEEEEEEEEC
T ss_pred ECCCChH------------HHHH-HHHHhccCCEEEEe
Confidence 6554221 1234 45789999998764
No 360
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=93.58 E-value=0.11 Score=43.66 Aligned_cols=109 Identities=13% Similarity=0.196 Sum_probs=72.2
Q ss_pred hhcccCCCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc--
Q 019550 98 PPLLCHQNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-- 175 (339)
Q Consensus 98 ~~l~~~~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-- 175 (339)
+......-+..||++|.|.|.+--.+....|...|.++|-.-. - .+.+ ..|.-.++.+|+++-|...
T Consensus 33 a~~~v~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~------~---hp~~--~P~~e~~ilGdi~~tL~~~~~ 101 (174)
T 3iht_A 33 AIAQTAGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVA------S---HPDS--TPPEAQLILGDIRETLPATLE 101 (174)
T ss_dssp HHHHTTTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCC------C---CGGG--CCCGGGEEESCHHHHHHHHHH
T ss_pred HHHHhcCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeec------c---CCCC--CCchHheecccHHHHHHHHHH
Confidence 3333344567899999999999999999999999999986211 1 1111 1355678999999988663
Q ss_pred --CCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 176 --NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 176 --~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
..+.-++=.|.-... +.....+...+.-++...|.+||+++-
T Consensus 102 r~g~~a~LaHaD~G~g~---~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 102 RFGATASLVHADLGGHN---REKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp HHCSCEEEEEECCCCSC---HHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred hcCCceEEEEeecCCCC---cchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 455666666765332 112222333333336789999999874
No 361
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.49 E-value=0.15 Score=48.18 Aligned_cols=93 Identities=16% Similarity=0.168 Sum_probs=58.2
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEE-EccHHHHHHhcCCceeEE
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLV-VNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~-~~D~~~~l~~~~~~yDvI 182 (339)
..++||++|+|+ |..+..+++..+ .+|++++.+++-.+.+++.++.. .++ ..| .+.+....+.+|+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~lGa~---------~v~~~~~-~~~~~~~~~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGAD---------SFLVSRD-QEQMQAAAGTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHTSCCS---------EEEETTC-HHHHHHTTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcCCc---------eEEeccC-HHHHHHhhCCCCEE
Confidence 467899999764 666677777776 48999999988777776443311 111 112 23444444579999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+-....+. . ++. +.+.|+++|.++.-
T Consensus 256 id~~g~~~-------~-----~~~-~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 256 IDTVSAVH-------P-----LLP-LFGLLKSHGKLILV 281 (366)
T ss_dssp EECCSSCC-------C-----SHH-HHHHEEEEEEEEEC
T ss_pred EECCCcHH-------H-----HHH-HHHHHhcCCEEEEE
Confidence 86654221 0 123 34578899998754
No 362
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.35 E-value=0.16 Score=47.16 Aligned_cols=97 Identities=22% Similarity=0.253 Sum_probs=62.9
Q ss_pred CCCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCcee
Q 019550 104 QNPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yD 180 (339)
...++||++|+ |-|..+..+++..+. +|++++.+++-.+.+.+.+.... -+.....|..+.+.. ..+.+|
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDG------AIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCSE------EEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCE------EEECCCHHHHHHHHHhcCCCce
Confidence 35678999997 567777888887764 89999999998888833332210 011111344444433 345799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+|+-... . +.++. +.+.|+++|.++.-
T Consensus 221 ~vi~~~g------~-------~~~~~-~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 221 VFFDNVG------G-------EILDT-VLTRIAFKARIVLC 247 (336)
T ss_dssp EEEESSC------H-------HHHHH-HHTTEEEEEEEEEC
T ss_pred EEEECCC------c-------chHHH-HHHHHhhCCEEEEE
Confidence 9876543 1 34566 57899999998864
No 363
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.34 E-value=0.08 Score=48.79 Aligned_cols=87 Identities=18% Similarity=0.295 Sum_probs=56.7
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
...++||++|+|. |.++..+++..+. +|++++ +++-.+.+++. +.. .++ .| .+ ...+.+|+|
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l-Ga~---------~v~-~d-~~---~v~~g~Dvv 203 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR-GVR---------HLY-RE-PS---QVTQKYFAI 203 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH-TEE---------EEE-SS-GG---GCCSCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc-CCC---------EEE-cC-HH---HhCCCccEE
Confidence 3467899999863 7788888887775 899999 88888888774 211 122 24 22 225789998
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+-....+ . ... +.+.|+++|.++.-
T Consensus 204 ~d~~g~~------------~-~~~-~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 204 FDAVNSQ------------N-AAA-LVPSLKANGHIICI 228 (315)
T ss_dssp ECC--------------------T-TGGGEEEEEEEEEE
T ss_pred EECCCch------------h-HHH-HHHHhcCCCEEEEE
Confidence 7543321 1 133 46789999998865
No 364
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.34 E-value=0.23 Score=48.05 Aligned_cols=106 Identities=16% Similarity=0.203 Sum_probs=59.7
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhcccc-----CC-CCeEEEE---ccH-----H
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAF-----CS-KKLNLVV---NDA-----K 169 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~-----~~-~rv~v~~---~D~-----~ 169 (339)
.+.+|++||+|. |..+..+++..+ .+|+++|.++...+.+++. ....... ++ .....+. .+. .
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~~-G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG-AVVSATDVRPAAKEQVASL-GAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSTTHHHHHHHT-TCEECCCCC-----------------CHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc-CCceeecccccccccccccchhhhcchhhhhhhH
Confidence 468999999984 444455566566 5899999999988888774 2110000 00 0000000 000 1
Q ss_pred HHHHhcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEE
Q 019550 170 AELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFV 219 (339)
Q Consensus 170 ~~l~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv 219 (339)
.-+.+.-...|+||.-...|. .++..|.+++. -+.++||.+++
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg--~~ap~Lvt~em-----v~~Mk~GsVIV 309 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPG--RPAPRLVTREM-----LDSMKPGSVVV 309 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSS--SCCCCCBCHHH-----HTTSCTTCEEE
T ss_pred hHHHHHhcCCCEEEECCcCCC--CCCCEEecHHH-----HhcCCCCCEEE
Confidence 112222256899998765443 23346778754 34678888776
No 365
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.24 E-value=0.64 Score=42.89 Aligned_cols=95 Identities=21% Similarity=0.345 Sum_probs=60.6
Q ss_pred CCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEE-ccHHHHHHhc-CCcee
Q 019550 105 NPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVV-NDAKAELEKR-NEKFD 180 (339)
Q Consensus 105 ~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~-~D~~~~l~~~-~~~yD 180 (339)
..++||+.|+ |-|..+..+++..+ .+|++++.+++-.+.+++. ... ..+.... .|..+.+... .+.+|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~~------~~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSDEKIAYLKQI-GFD------AAFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TCS------EEEETTSCSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CCc------EEEecCCHHHHHHHHHHHhCCCCe
Confidence 4578999996 56666777777666 4899999999888888554 210 0000001 3444444332 35799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+|+.... + +.++. +.+.|+++|.+++-
T Consensus 217 ~vi~~~g-----~--------~~~~~-~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 217 CYFDNVG-----G--------EFLNT-VLSQMKDFGKIAIC 243 (333)
T ss_dssp EEEESSC-----H--------HHHHH-HHTTEEEEEEEEEC
T ss_pred EEEECCC-----h--------HHHHH-HHHHHhcCCEEEEE
Confidence 9987653 1 23555 56899999998764
No 366
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.20 E-value=0.31 Score=45.43 Aligned_cols=97 Identities=20% Similarity=0.323 Sum_probs=60.9
Q ss_pred CCCCeEEEEecc--hhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cC-Cc
Q 019550 104 QNPKTVFIMGGG--EGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RN-EK 178 (339)
Q Consensus 104 ~~p~~VL~IG~G--~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~-~~ 178 (339)
...++||++|+| .|..+..+++.. + .+|++++.+++-.+.+++. ... .. +.....|..+.+.. .. +.
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~G-a~Vi~~~~~~~~~~~~~~~-g~~-~~-----~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVREEAVEAAKRA-GAD-YV-----INASMQDPLAEIRRITESKG 240 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSHHHHHHHHHH-TCS-EE-----EETTTSCHHHHHHHHTTTSC
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHHh-CCC-EE-----ecCCCccHHHHHHHHhcCCC
Confidence 345789999987 455666666655 5 5899999999988888764 210 00 00001233333333 22 47
Q ss_pred eeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 179 FDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 179 yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+|+|+..... .+.++. +.+.|+++|.++.-
T Consensus 241 ~d~vi~~~g~------------~~~~~~-~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 241 VDAVIDLNNS------------EKTLSV-YPKALAKQGKYVMV 270 (347)
T ss_dssp EEEEEESCCC------------HHHHTT-GGGGEEEEEEEEEC
T ss_pred ceEEEECCCC------------HHHHHH-HHHHHhcCCEEEEE
Confidence 9999866541 134566 67899999998764
No 367
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.20 E-value=0.26 Score=45.69 Aligned_cols=97 Identities=19% Similarity=0.293 Sum_probs=62.9
Q ss_pred CCCCeEEEEe--cchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc--CCce
Q 019550 104 QNPKTVFIMG--GGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR--NEKF 179 (339)
Q Consensus 104 ~~p~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~y 179 (339)
...++||++| +|-|..+..+++..+ .+|++++.+++-.+.+++.-... -+.....|..+.+... ...+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga~~-------~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTDEKLKIAKEYGAEY-------LINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCSE-------EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCcE-------EEeCCCchHHHHHHHHhCCCCc
Confidence 3467899999 356777788888776 48999999999888888752110 0010113444444432 3569
Q ss_pred eEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 180 DVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
|+|+-.... +.++. +.+.|+++|.++.-.
T Consensus 219 D~vid~~g~-------------~~~~~-~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 219 DASFDSVGK-------------DTFEI-SLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEEECCGG-------------GGHHH-HHHHEEEEEEEEECC
T ss_pred eEEEECCCh-------------HHHHH-HHHHhccCCEEEEEc
Confidence 998865431 22455 567899999988643
No 368
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.00 E-value=0.23 Score=46.38 Aligned_cols=95 Identities=18% Similarity=0.291 Sum_probs=62.2
Q ss_pred CCCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-C-Cce
Q 019550 104 QNPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-N-EKF 179 (339)
Q Consensus 104 ~~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~-~~y 179 (339)
...++||++|+ |-|..+..+++..+. +|++++.+++-.+.+++.-. . .-+... .|..+.+... . +.+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga-~------~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGA-D------IVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTC-S------EEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC-c------EEecCc-hhHHHHHHHHhCCCCc
Confidence 34678999996 567788888887764 89999999988888887421 1 001111 3444444433 2 369
Q ss_pred eEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 180 DVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
|+|+-....+ .++. +.+.|+++|.++.-
T Consensus 229 Dvvid~~g~~-------------~~~~-~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 229 DMVVDPIGGP-------------AFDD-AVRTLASEGRLLVV 256 (342)
T ss_dssp EEEEESCC---------------CHHH-HHHTEEEEEEEEEC
T ss_pred eEEEECCchh-------------HHHH-HHHhhcCCCEEEEE
Confidence 9998665421 1445 46789999998864
No 369
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.96 E-value=0.24 Score=46.27 Aligned_cols=96 Identities=21% Similarity=0.394 Sum_probs=62.7
Q ss_pred CCCeEEEEe--cchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-CCceeE
Q 019550 105 NPKTVFIMG--GGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-NEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~yDv 181 (339)
..++||++| +|-|..+..+++..+. +|++++.+++-.+.+++. +.. ..+ +.+ .|..+.++.. .+.+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga~-~vi-~~~-----~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM-GAD-IVL-NHK-----ESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH-TCS-EEE-CTT-----SCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc-CCc-EEE-ECC-----ccHHHHHHHhCCCCccE
Confidence 467899995 3457777888887764 899999999989998884 211 011 111 2334444333 457998
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
|+-... ....++. +.+.|+++|.++.-.
T Consensus 221 v~d~~g------------~~~~~~~-~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 221 VFCTFN------------TDMYYDD-MIQLVKPRGHIATIV 248 (346)
T ss_dssp EEESSC------------HHHHHHH-HHHHEEEEEEEEESS
T ss_pred EEECCC------------chHHHHH-HHHHhccCCEEEEEC
Confidence 876432 1245666 568999999997643
No 370
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.95 E-value=0.58 Score=44.31 Aligned_cols=101 Identities=17% Similarity=0.366 Sum_probs=55.6
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+++|+++|+|. |..+...++..+ .+|+++|.+++-.+.+++.+. ..+.....+..+ +...-+..|+||
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d~~~~~~~~~~~~~g--------~~~~~~~~~~~~-l~~~~~~~DvVi 234 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMG-AQVTILDVNHKRLQYLDDVFG--------GRVITLTATEAN-IKKSVQHADLLI 234 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTT--------TSEEEEECCHHH-HHHHHHHCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHhcC--------ceEEEecCCHHH-HHHHHhCCCEEE
Confidence 368999999863 333334444455 489999999988776665332 123333322221 211113689998
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
.....+. .....+.+.+. -+.|+++|+++ +.+
T Consensus 235 ~~~g~~~--~~~~~li~~~~-----l~~mk~gg~iV-~v~ 266 (369)
T 2eez_A 235 GAVLVPG--AKAPKLVTRDM-----LSLMKEGAVIV-DVA 266 (369)
T ss_dssp ECCC---------CCSCHHH-----HTTSCTTCEEE-ECC
T ss_pred ECCCCCc--cccchhHHHHH-----HHhhcCCCEEE-EEe
Confidence 8776432 01224445543 34578888875 443
No 371
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.86 E-value=0.33 Score=46.81 Aligned_cols=43 Identities=28% Similarity=0.348 Sum_probs=32.0
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHh
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRF 148 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~ 148 (339)
.+++|+++|+|. |..+..+++..+ .+|+++|.++...+.+++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D~~~~~~~~~~~l 214 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG-AIVRAFDTRPEVKEQVQSM 214 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCGGGHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc
Confidence 378999999984 334455566666 4899999999887777553
No 372
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.71 E-value=0.13 Score=47.60 Aligned_cols=96 Identities=14% Similarity=0.183 Sum_probs=62.4
Q ss_pred CCCeEEEEe--cchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc--CCcee
Q 019550 105 NPKTVFIMG--GGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR--NEKFD 180 (339)
Q Consensus 105 ~p~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~yD 180 (339)
..++||++| +|-|..+..+++..+ .+|++++.+++-.+.+++.-... -+.....|..+.+.+. .+.+|
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~Ga~~-------~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALG-AKLIGTVSSPEKAAHAKALGAWE-------TIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCCE-------EEeCCCccHHHHHHHHhCCCCce
Confidence 467899999 456777788888776 48999999999989888752110 0111113444444432 24799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|+-.... +.++. +.+.|+++|.++.-.
T Consensus 212 vvid~~g~-------------~~~~~-~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 212 VVYDGVGQ-------------DTWLT-SLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEESSCG-------------GGHHH-HHTTEEEEEEEEECC
T ss_pred EEEECCCh-------------HHHHH-HHHHhcCCCEEEEEe
Confidence 98865431 22455 568999999988653
No 373
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.71 E-value=0.35 Score=46.20 Aligned_cols=42 Identities=21% Similarity=0.294 Sum_probs=31.7
Q ss_pred CCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHH
Q 019550 105 NPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRR 147 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~ 147 (339)
.+++|+++|+|. |..+..+++..+. +|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 478999999984 3344555666764 79999999887777766
No 374
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.49 E-value=0.12 Score=48.19 Aligned_cols=97 Identities=11% Similarity=0.065 Sum_probs=61.9
Q ss_pred CCCCeEEEEecc--hhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc--CCce
Q 019550 104 QNPKTVFIMGGG--EGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR--NEKF 179 (339)
Q Consensus 104 ~~p~~VL~IG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~y 179 (339)
...++||++|+| -|..+..+++..+ .+|++++.+++-.+.+++.-... -+.....|..+.+... ...+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lga~~-------~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHTEELLRLGAAY-------VIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhCCCcE-------EEeCCcccHHHHHHHHhCCCCC
Confidence 346789999986 5777788888776 48999999998888888742110 0111113444444332 2479
Q ss_pred eEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 180 DVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
|+|+-.... ....+. + +.|+++|.++.-.
T Consensus 215 Dvvid~~g~------------~~~~~~-~-~~l~~~G~iv~~G 243 (340)
T 3gms_A 215 DAAIDSIGG------------PDGNEL-A-FSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEESSCH------------HHHHHH-H-HTEEEEEEEEECC
T ss_pred cEEEECCCC------------hhHHHH-H-HHhcCCCEEEEEe
Confidence 999865431 123343 3 6899999988643
No 375
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=92.39 E-value=4 Score=45.20 Aligned_cols=151 Identities=8% Similarity=0.021 Sum_probs=95.3
Q ss_pred CCeEEEEecchhHHHHHHHhcCCC-CEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc---------
Q 019550 106 PKTVFIMGGGEGSAAREALKHKSL-EKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR--------- 175 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~--------- 175 (339)
.-++++|-+|.|++..-+.+ .+. .-+.++|+|+..++.-+.++ |...++.+|..+++...
T Consensus 851 ~l~viDLFsG~GGlslGfe~-AG~~~vv~avEid~~A~~ty~~N~---------p~~~~~~~DI~~l~~~~~~gdi~~~~ 920 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQ-AGISETLWAIEMWDPAAQAFRLNN---------PGTTVFTEDCNVLLKLVMAGEVTNSL 920 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHH-TTSEEEEEEECCSHHHHHHHHHHC---------TTSEEECSCHHHHHHHHTTTCSBCSS
T ss_pred CceEEecccCccHHHHHHHH-CCCCceEEEEECCHHHHHHHHHhC---------CCCcEeeccHHHHhHhhhccchhhhh
Confidence 44799999999999987766 454 45789999999999888775 34467788887665320
Q ss_pred ------CCceeEEEecCCC-CCC-CCcc---------ccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHH
Q 019550 176 ------NEKFDVIFGDLAD-PVE-GGPC---------YQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIY 238 (339)
Q Consensus 176 ------~~~yDvIi~D~~d-~~~-~~p~---------~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~ 238 (339)
.+..|+|+.-++- +.. .+.. ..| -.+|++. + +.++|.-+++=|+.....+.....+..+.
T Consensus 921 ~~~lp~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L-~~~~lri-v-~~~rPk~fv~ENV~glls~~~g~~~~~il 997 (1330)
T 3av4_A 921 GQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSL-VVSFLSY-C-DYYRPRFFLLENVRNFVSYRRSMVLKLTL 997 (1330)
T ss_dssp CCBCCCTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSH-HHHHHHH-H-HHHCCSEEEEEEEGGGGTTTTTHHHHHHH
T ss_pred hhhccccCccceEEecCCCcccccccccccccccchhhHH-HHHHHHH-H-HHhcCcEEEEeccHHHhccCccHHHHHHH
Confidence 1358999988863 221 1110 011 1356664 4 57899876665652110012234677888
Q ss_pred HHHHhHCCceEEEEEeecccC----CceeEEEEec
Q 019550 239 NTIKQVFKHVVAYTAHVPSFA----DTWGWVMASD 269 (339)
Q Consensus 239 ~~l~~~F~~v~~~~~~iP~~~----~~~~~~~as~ 269 (339)
+.|.+..-.+....+.-..|| ..-.|++|.+
T Consensus 998 ~~L~~lGY~v~~~vLnA~dyGVPQ~R~Rvfivg~r 1032 (1330)
T 3av4_A 998 RCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAA 1032 (1330)
T ss_dssp HHHHHHTCEEEEEEEEGGGGSCSBCCEEEEEEEEC
T ss_pred HHHHhcCCeeeEEEecHHHcCCCccccEEEEEEec
Confidence 888888777765544444454 2234777864
No 376
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.38 E-value=0.45 Score=42.21 Aligned_cols=81 Identities=15% Similarity=0.161 Sum_probs=47.4
Q ss_pred HHHhhhhcccCCCCCeEEEEecchhHHHH--HHHhcCCCCEEEEEEcC--HHHHHHHHHhhhhhccccCCCCeEEEEccH
Q 019550 93 ECLIHPPLLCHQNPKTVFIMGGGEGSAAR--EALKHKSLEKVVMCDID--QEVVDFCRRFLTVNQEAFCSKKLNLVVNDA 168 (339)
Q Consensus 93 e~l~~~~l~~~~~p~~VL~IG~G~G~~~~--~l~~~~~~~~v~~VEid--~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~ 168 (339)
|.|.+.|++..-..++||++|+|.=+..+ .+++ . ..+|++|+.+ +++.+++. ..+++++..+.
T Consensus 18 ~~~~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~-~-GA~VtVvap~~~~~l~~l~~-----------~~~i~~i~~~~ 84 (223)
T 3dfz_A 18 EGRHMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQ-E-GAAITVVAPTVSAEINEWEA-----------KGQLRVKRKKV 84 (223)
T ss_dssp ----CCEEEECCTTCCEEEECCSHHHHHHHHHHGG-G-CCCEEEECSSCCHHHHHHHH-----------TTSCEEECSCC
T ss_pred cccCccccEEEcCCCEEEEECCCHHHHHHHHHHHH-C-CCEEEEECCCCCHHHHHHHH-----------cCCcEEEECCC
Confidence 55667888877788999999998655443 2333 3 4678888643 44444433 23556554432
Q ss_pred HHHHHhcCCceeEEEecCCCC
Q 019550 169 KAELEKRNEKFDVIFGDLADP 189 (339)
Q Consensus 169 ~~~l~~~~~~yDvIi~D~~d~ 189 (339)
. ...-..+|+||....++
T Consensus 85 ~---~~dL~~adLVIaAT~d~ 102 (223)
T 3dfz_A 85 G---EEDLLNVFFIVVATNDQ 102 (223)
T ss_dssp C---GGGSSSCSEEEECCCCT
T ss_pred C---HhHhCCCCEEEECCCCH
Confidence 1 12225699999876654
No 377
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.93 E-value=0.61 Score=43.33 Aligned_cols=96 Identities=14% Similarity=0.214 Sum_probs=61.3
Q ss_pred CCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc--CCcee
Q 019550 105 NPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR--NEKFD 180 (339)
Q Consensus 105 ~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~yD 180 (339)
..++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++. ... .-+.....|..+.+... ...+|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-ga~------~~~d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKAL-GAD------ETVNYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TCS------EEEETTSTTHHHHHHHHTTTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CCC------EEEcCCcccHHHHHHHHhCCCCce
Confidence 4578999997 56777788888776 4899999999988888764 211 00000012333334332 24799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|+.... +. .++. +.+.|+++|.++.-.
T Consensus 238 ~vi~~~g-~~------------~~~~-~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 238 KVVDHTG-AL------------YFEG-VIKATANGGRIAIAG 265 (343)
T ss_dssp EEEESSC-SS------------SHHH-HHHHEEEEEEEEESS
T ss_pred EEEECCC-HH------------HHHH-HHHhhccCCEEEEEe
Confidence 9987654 21 1344 457889999987643
No 378
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.91 E-value=0.27 Score=45.54 Aligned_cols=96 Identities=15% Similarity=0.227 Sum_probs=60.6
Q ss_pred CCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-c-CCcee
Q 019550 105 NPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-R-NEKFD 180 (339)
Q Consensus 105 ~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~-~~~yD 180 (339)
..++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++. ... .-+.....|..+.+.. . ...+|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-g~~------~~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTEEKAETARKL-GCH------HTINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TCS------EEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CCC------EEEECCCHHHHHHHHHHhCCCCCe
Confidence 4578999994 66777777787776 5899999999888888764 210 0000011233333332 2 34699
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|+..... +.++. +.+.|+++|.++.-.
T Consensus 217 ~vi~~~g~-------------~~~~~-~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 217 VVYDSIGK-------------DTLQK-SLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEECSCT-------------TTHHH-HHHTEEEEEEEEECC
T ss_pred EEEECCcH-------------HHHHH-HHHhhccCCEEEEEe
Confidence 99866532 12455 567899999987643
No 379
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=91.88 E-value=0.3 Score=47.17 Aligned_cols=48 Identities=17% Similarity=0.216 Sum_probs=40.6
Q ss_pred CCCCeEEEEecchhHHHHHHH-hcCC-CCEEEEEEcCHHHHHHHHHhhhh
Q 019550 104 QNPKTVFIMGGGEGSAAREAL-KHKS-LEKVVMCDIDQEVVDFCRRFLTV 151 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~-~~~~-~~~v~~VEid~~vi~~ar~~f~~ 151 (339)
.+...|+|||++.|..+..++ +..+ ..+|.++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 345789999999999999887 4444 37999999999999999998865
No 380
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.63 E-value=0.27 Score=45.63 Aligned_cols=96 Identities=20% Similarity=0.275 Sum_probs=61.7
Q ss_pred CCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEE-ccHHHHHHhc-CCcee
Q 019550 105 NPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVV-NDAKAELEKR-NEKFD 180 (339)
Q Consensus 105 ~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~-~D~~~~l~~~-~~~yD 180 (339)
..++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++.++... . +.... .|..+.++.. .+.+|
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~~g~~~-~-----~d~~~~~~~~~~~~~~~~~~~d 227 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSKEKVDLLKTKFGFDD-A-----FNYKEESDLTAALKRCFPNGID 227 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTSCCSE-E-----EETTSCSCSHHHHHHHCTTCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCce-E-----EecCCHHHHHHHHHHHhCCCCc
Confidence 4578999996 56777777887776 589999999998888874332110 0 00000 1333444332 35699
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+|+.... + +.++. +.+.|+++|.+++-
T Consensus 228 ~vi~~~g-----~--------~~~~~-~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 228 IYFENVG-----G--------KMLDA-VLVNMNMHGRIAVC 254 (345)
T ss_dssp EEEESSC-----H--------HHHHH-HHTTEEEEEEEEEC
T ss_pred EEEECCC-----H--------HHHHH-HHHHHhcCCEEEEE
Confidence 9986643 1 24566 57899999998764
No 381
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.62 E-value=0.33 Score=45.44 Aligned_cols=96 Identities=20% Similarity=0.312 Sum_probs=61.0
Q ss_pred CCCeEEEEe--cchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeE
Q 019550 105 NPKTVFIMG--GGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDv 181 (339)
..++||++| +|-|..+..+++..+ .+|++++.+++-.+.+++.-... -+.....|..+.+.. ..+.+|+
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lGa~~-------~~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFG-AEVYATAGSTGKCEACERLGAKR-------GINYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHHSSCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCCCE-------EEeCCchHHHHHHHHHhCCCceE
Confidence 457899996 346777788888776 48999999999999888742110 000011233333322 2467999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
|+-.... +.++. +.+.|+++|.++.-.
T Consensus 239 vid~~g~-------------~~~~~-~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 239 ILDMIGA-------------AYFER-NIASLAKDGCLSIIA 265 (353)
T ss_dssp EEESCCG-------------GGHHH-HHHTEEEEEEEEECC
T ss_pred EEECCCH-------------HHHHH-HHHHhccCCEEEEEE
Confidence 8865431 12445 467899999987643
No 382
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=91.57 E-value=4 Score=42.41 Aligned_cols=44 Identities=14% Similarity=0.034 Sum_probs=33.6
Q ss_pred CeEEEEecchhHHHHHHHhcC-----CCCEEEEEEcCHHHHHHHHHhhh
Q 019550 107 KTVFIMGGGEGSAAREALKHK-----SLEKVVMCDIDQEVVDFCRRFLT 150 (339)
Q Consensus 107 ~~VL~IG~G~G~~~~~l~~~~-----~~~~v~~VEid~~vi~~ar~~f~ 150 (339)
.+|+||-||.|++..-+.+.- ...-+.+||+|+.+++.-+.+++
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 469999999999887665421 02457799999999999888864
No 383
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.56 E-value=0.43 Score=46.18 Aligned_cols=94 Identities=21% Similarity=0.296 Sum_probs=59.7
Q ss_pred CCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHH--HHHhc-CCceeE
Q 019550 106 PKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA--ELEKR-NEKFDV 181 (339)
Q Consensus 106 p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~--~l~~~-~~~yDv 181 (339)
..+|+++|+|- |......++..+ ..|++||.|++.++.+++. .+.++.+|+.+ .|+.. -++.|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g-~~vvvId~d~~~v~~~~~~-----------g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG-VKMVVLDHDPDHIETLRKF-----------GMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEEEEECCHHHHHHHHHT-----------TCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHhC-----------CCeEEEcCCCCHHHHHhcCCCccCE
Confidence 35799999984 333233333333 6799999999999988753 25578888864 45554 367999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
||+-..++. . +.. .-. ..+.+.|+..+++.
T Consensus 72 viv~~~~~~-----~---n~~-i~~-~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 72 LINAIDDPQ-----T---NLQ-LTE-MVKEHFPHLQIIAR 101 (413)
T ss_dssp EEECCSSHH-----H---HHH-HHH-HHHHHCTTCEEEEE
T ss_pred EEECCCChH-----H---HHH-HHH-HHHHhCCCCeEEEE
Confidence 998876532 0 112 222 34567777665554
No 384
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=91.56 E-value=0.31 Score=45.63 Aligned_cols=95 Identities=18% Similarity=0.209 Sum_probs=60.3
Q ss_pred CeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEEE
Q 019550 107 KTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVIF 183 (339)
Q Consensus 107 ~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvIi 183 (339)
++||+.|+ |-|..+..+++..+..+|++++.+++-.+.+++.+.... -+.....|..+.+.. ..+.+|+|+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~------~~d~~~~~~~~~~~~~~~~~~d~vi 235 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDA------AINYKKDNVAEQLRESCPAGVDVYF 235 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSE------EEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCce------EEecCchHHHHHHHHhcCCCCCEEE
Confidence 78999996 556667777776765589999999988887776332110 000001233344433 233799998
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
.... . +.++. +.+.|+++|.++.-
T Consensus 236 ~~~G------~-------~~~~~-~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 236 DNVG------G-------NISDT-VISQMNENSHIILC 259 (357)
T ss_dssp ESCC------H-------HHHHH-HHHTEEEEEEEEEC
T ss_pred ECCC------H-------HHHHH-HHHHhccCcEEEEE
Confidence 6643 1 34555 56799999998754
No 385
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.26 E-value=0.68 Score=43.51 Aligned_cols=96 Identities=19% Similarity=0.320 Sum_probs=62.7
Q ss_pred CCCCeEEEEe--cchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCcee
Q 019550 104 QNPKTVFIMG--GGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yD 180 (339)
...++||++| +|.|..+..+++..+. +|++++.+++-.+.+++. .... .+ .....|..+.++. ..+.+|
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~-Ga~~-~~-----~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSL-GCDR-PI-----NYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT-TCSE-EE-----ETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHc-CCcE-EE-----ecCChhHHHHHHHhcCCCCC
Confidence 3467899999 5678888888887764 899999999888888874 2110 00 0001233444433 235799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+|+-... + +.++. +.+.|+++|.++.-
T Consensus 234 ~vid~~g-----~--------~~~~~-~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 234 VVYESVG-----G--------AMFDL-AVDALATKGRLIVI 260 (362)
T ss_dssp EEEECSC-----T--------HHHHH-HHHHEEEEEEEEEC
T ss_pred EEEECCC-----H--------HHHHH-HHHHHhcCCEEEEE
Confidence 9986543 1 34555 56789999988764
No 386
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.97 E-value=0.54 Score=38.38 Aligned_cols=74 Identities=27% Similarity=0.287 Sum_probs=43.6
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHH--HHHHhc-CCce
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAK--AELEKR-NEKF 179 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~--~~l~~~-~~~y 179 (339)
....+|+++|+|. |......++..+ .+|+++|.+++-++.+++ .....++.+|.. +.+... -+.+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG-HSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTGGGC
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCcccC
Confidence 3467899999874 333333333344 589999999876543321 123445556643 334432 2569
Q ss_pred eEEEecCCC
Q 019550 180 DVIFGDLAD 188 (339)
Q Consensus 180 DvIi~D~~d 188 (339)
|+|+.-..+
T Consensus 86 d~Vi~~~~~ 94 (155)
T 2g1u_A 86 DMVFAFTND 94 (155)
T ss_dssp SEEEECSSC
T ss_pred CEEEEEeCC
Confidence 999987764
No 387
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.90 E-value=1.5 Score=42.76 Aligned_cols=140 Identities=15% Similarity=0.187 Sum_probs=79.0
Q ss_pred CCeEEEEecchhHHH--HHHHhcCCCCEEEEEEcCHHHHHHHHHhh-hhhcccc--------CCCCeEEEEccHHHHHHh
Q 019550 106 PKTVFIMGGGEGSAA--REALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEAF--------CSKKLNLVVNDAKAELEK 174 (339)
Q Consensus 106 p~~VL~IG~G~G~~~--~~l~~~~~~~~v~~VEid~~vi~~ar~~f-~~~~~~~--------~~~rv~v~~~D~~~~l~~ 174 (339)
.-++-+||+|.=+++ ..+++ . .-+|+++|+|++.++..++.- +.....+ ...++++ ..|..+-++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~-~-G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~~- 83 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSD-F-GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGVK- 83 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-T-TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHT-
T ss_pred ceEEEEEcCCHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHHh-
Confidence 458999999954443 33444 3 358999999999888766531 0000000 0234443 356544443
Q ss_pred cCCceeEEEecCCCCCC--CCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEE
Q 019550 175 RNEKFDVIFGDLADPVE--GGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYT 252 (339)
Q Consensus 175 ~~~~yDvIi~D~~d~~~--~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~ 252 (339)
..|+||+-.+.|.. .+.+.--+-++..+. +.+.|++|-+++..++.+ ....+.+.+.+.+..+......
T Consensus 84 ---~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~-i~~~l~~g~iVV~~STv~-----pgtt~~l~~~l~e~~~~~d~~v 154 (446)
T 4a7p_A 84 ---DADAVFIAVGTPSRRGDGHADLSYVFAAARE-IAENLTKPSVIVTKSTVP-----VGTGDEVERIIAEVAPNSGAKV 154 (446)
T ss_dssp ---TCSEEEECCCCCBCTTTCCBCTHHHHHHHHH-HHHSCCSCCEEEECSCCC-----TTHHHHHHHHHHHHSTTSCCEE
T ss_pred ---cCCEEEEEcCCCCccccCCccHHHHHHHHHH-HHHhcCCCCEEEEeCCCC-----chHHHHHHHHHHHhCCCCCceE
Confidence 46999998876641 121111133566677 677899887777654322 2344556666666654333333
Q ss_pred Eeeccc
Q 019550 253 AHVPSF 258 (339)
Q Consensus 253 ~~iP~~ 258 (339)
..-|.+
T Consensus 155 ~~~Pe~ 160 (446)
T 4a7p_A 155 VSNPEF 160 (446)
T ss_dssp EECCCC
T ss_pred EeCccc
Confidence 445766
No 388
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.85 E-value=0.23 Score=45.86 Aligned_cols=96 Identities=18% Similarity=0.197 Sum_probs=60.1
Q ss_pred CCCeEEEEe--cchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-c-CCcee
Q 019550 105 NPKTVFIMG--GGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-R-NEKFD 180 (339)
Q Consensus 105 ~p~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~-~~~yD 180 (339)
..++||++| +|-|..+..+++..+ .+|++++.+++-.+.+++. .... -+.....|..+.+.. . ...+|
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~-g~~~------~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALKA-GAWQ------VINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHH-TCSE------EEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CCCE------EEECCCccHHHHHHHHhCCCCce
Confidence 457899999 456666777777665 5899999999888888773 2110 000001233333332 2 24699
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+||.... + +.++. +.+.|+++|.++.-.
T Consensus 212 ~vi~~~g-~------------~~~~~-~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 212 VVYDSVG-R------------DTWER-SLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEECSC-G------------GGHHH-HHHTEEEEEEEEECC
T ss_pred EEEECCc-h------------HHHHH-HHHHhcCCCEEEEEe
Confidence 9987654 1 22455 567899999987643
No 389
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=90.81 E-value=0.62 Score=43.61 Aligned_cols=96 Identities=16% Similarity=0.210 Sum_probs=59.4
Q ss_pred CCCeEEEEe--cchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-c-CCcee
Q 019550 105 NPKTVFIMG--GGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-R-NEKFD 180 (339)
Q Consensus 105 ~p~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~-~~~yD 180 (339)
..++||++| +|-|..+..+++..+ .+|++++.+++-++.+++. ... .. +.....|..+.+.. . .+.+|
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-g~~-~~-----~~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQKKLQMAEKL-GAA-AG-----FNYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-TCS-EE-----EETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CCc-EE-----EecCChHHHHHHHHHhcCCCce
Confidence 457899998 356667777777666 5899999999988888654 210 00 00001233333433 2 24699
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|+..... + .++. +.+.|+++|.++.-.
T Consensus 234 ~vi~~~G~-----~--------~~~~-~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 234 LILDCIGG-----S--------YWEK-NVNCLALDGRWVLYG 261 (354)
T ss_dssp EEEESSCG-----G--------GHHH-HHHHEEEEEEEEECC
T ss_pred EEEECCCc-----h--------HHHH-HHHhccCCCEEEEEe
Confidence 99866541 1 1344 456889999988643
No 390
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.42 E-value=0.15 Score=47.59 Aligned_cols=62 Identities=15% Similarity=0.057 Sum_probs=48.2
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHH
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAEL 172 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l 172 (339)
.+...|||-.||+|+++.++.+. ..+..++|+++..++++++.+.... .....+.+|+++..
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r~~~~~-----~~~~~~~~~~~~i~ 312 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFRFLDNN-----ISEEKITDIYNRIL 312 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGGGSCSC-----SCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHHHHhcc-----cchHHHHHHHHHHH
Confidence 44567999999999999988874 3789999999999999999986432 23555566666554
No 391
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.39 E-value=0.61 Score=43.44 Aligned_cols=94 Identities=18% Similarity=0.331 Sum_probs=61.1
Q ss_pred CCCCeEEEEe--cchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc--CCce
Q 019550 104 QNPKTVFIMG--GGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR--NEKF 179 (339)
Q Consensus 104 ~~p~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~y 179 (339)
...++||++| +|-|..+..+++..+. +|+++ .+++-.+.+++.- .. . +. ...|..+.+... ...+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lG-a~------~-i~-~~~~~~~~~~~~~~~~g~ 217 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLG-AT------P-ID-ASREPEDYAAEHTAGQGF 217 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHT-SE------E-EE-TTSCHHHHHHHHHTTSCE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcC-CC------E-ec-cCCCHHHHHHHHhcCCCc
Confidence 3467899999 3567888888887764 89999 8888888887742 11 1 22 223444444332 3579
Q ss_pred eEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 180 DVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
|+|+-... + +.++. +.+.|+++|.++.-.
T Consensus 218 D~vid~~g-----~--------~~~~~-~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 218 DLVYDTLG-----G--------PVLDA-SFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEEESSC-----T--------HHHHH-HHHHEEEEEEEEESC
T ss_pred eEEEECCC-----c--------HHHHH-HHHHHhcCCeEEEEc
Confidence 98875432 1 23555 567899999988643
No 392
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.34 E-value=9.2 Score=34.90 Aligned_cols=113 Identities=12% Similarity=0.114 Sum_probs=67.8
Q ss_pred CCeEEEEecch--hHHHHHHHhcCCCCEEEEEEcC--HHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 106 PKTVFIMGGGE--GSAAREALKHKSLEKVVMCDID--QEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 106 p~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid--~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
..+|.+||+|. ..+++.+++. +..+|+++|.+ ++..+.+++. .++ ...+..+.++ ..|+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~~~~~~~~~~~~~-----------g~~-~~~~~~e~~~----~aDv 86 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAASAESWRPRAEEL-----------GVS-CKASVAEVAG----ECDV 86 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSSCHHHHHHHHHHT-----------TCE-ECSCHHHHHH----HCSE
T ss_pred CCEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCCCCHHHHHHHHHC-----------CCE-EeCCHHHHHh----cCCE
Confidence 46899999984 3445555553 43489999997 5666655542 122 2234444443 3699
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEE
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVA 250 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~ 250 (339)
||+-.+++. ..+.++. +...|+++.+++ +..+. .......+.+.+.+.++.+..
T Consensus 87 Vi~~vp~~~---------~~~~~~~-l~~~l~~~~ivv-d~st~----~~~~~~~~~~~~~~~~~g~~~ 140 (312)
T 3qsg_A 87 IFSLVTAQA---------ALEVAQQ-AGPHLCEGALYA-DFTSC----SPAVKRAIGDVISRHRPSAQY 140 (312)
T ss_dssp EEECSCTTT---------HHHHHHH-HGGGCCTTCEEE-ECCCC----CHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEecCchh---------HHHHHHh-hHhhcCCCCEEE-EcCCC----CHHHHHHHHHHHHhhcCCCeE
Confidence 999887543 2255677 678888877665 43221 234455666667666544443
No 393
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.29 E-value=1.1 Score=37.32 Aligned_cols=95 Identities=19% Similarity=0.191 Sum_probs=56.0
Q ss_pred CCeEEEEecch-hH-HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHH--HHHHhc--CCce
Q 019550 106 PKTVFIMGGGE-GS-AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAK--AELEKR--NEKF 179 (339)
Q Consensus 106 p~~VL~IG~G~-G~-~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~--~~l~~~--~~~y 179 (339)
..+|+++|+|. |. +++.+.+ ....+|+++|.|++-++.+++. .+.++.+|+. +.+... -+.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~-~~g~~V~vid~~~~~~~~~~~~-----------g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA-RYGKISLGIEIREEAAQQHRSE-----------GRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH-HHCSCEEEEESCHHHHHHHHHT-----------TCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHh-ccCCeEEEEECCHHHHHHHHHC-----------CCCEEEcCCCCHHHHHhccCCCCC
Confidence 45899999874 22 2333333 2025799999999887766542 2345666653 335443 4679
Q ss_pred eEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 180 DVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
|+|++-.++.. ........ .+.+.+++.++...
T Consensus 107 d~vi~~~~~~~--------~~~~~~~~--~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLAMPHHQ--------GNQTALEQ--LQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEECCSSHH--------HHHHHHHH--HHHTTCCSEEEEEE
T ss_pred CEEEEeCCChH--------HHHHHHHH--HHHHCCCCEEEEEE
Confidence 99998765421 11233333 34667777776653
No 394
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.28 E-value=0.57 Score=41.92 Aligned_cols=34 Identities=29% Similarity=0.469 Sum_probs=23.6
Q ss_pred CCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCH
Q 019550 106 PKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQ 139 (339)
Q Consensus 106 p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 139 (339)
.++||++|+|+ |......+...+..+++.||.|.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 57899999974 33223333335778999999996
No 395
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.20 E-value=1.1 Score=41.82 Aligned_cols=106 Identities=11% Similarity=0.118 Sum_probs=65.5
Q ss_pred CCCCeEEEEecchhHH--HHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhh------ccccCC--------CCeEEEEcc
Q 019550 104 QNPKTVFIMGGGEGSA--AREALKHKSLEKVVMCDIDQEVVDFCRRFLTVN------QEAFCS--------KKLNLVVND 167 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~------~~~~~~--------~rv~v~~~D 167 (339)
|..++|.+||+|.=+. +..++. . .-+|+.+|++++.++.++++.... ...+.. .+++. ..|
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~-~-G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~ 80 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFAS-G-GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTN 80 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHH-T-TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECC
T ss_pred CCCCeEEEECCcHHHHHHHHHHHh-C-CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccc
Confidence 4567899999985433 333444 3 467999999999988877665321 010100 12332 234
Q ss_pred HHHHHHhcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCC
Q 019550 168 AKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 168 ~~~~l~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
..+.+ +..|+|+=..+... -..++.|+. +.+.++|+-+|+.|+.+
T Consensus 81 l~~a~----~~ad~ViEav~E~l-------~iK~~lf~~-l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 81 LAEAV----EGVVHIQECVPENL-------DLKRKIFAQ-LDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp HHHHT----TTEEEEEECCCSCH-------HHHHHHHHH-HHTTCCSSSEEEECCSS
T ss_pred hHhHh----ccCcEEeeccccHH-------HHHHHHHHH-HHHHhhhcceeehhhhh
Confidence 32222 45789887766332 135689999 89999999999998754
No 396
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.07 E-value=1.3 Score=43.23 Aligned_cols=103 Identities=17% Similarity=0.264 Sum_probs=63.4
Q ss_pred CCeEEEEecch--hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhh------cc-----ccCCCCeEEEEccHHHHH
Q 019550 106 PKTVFIMGGGE--GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVN------QE-----AFCSKKLNLVVNDAKAEL 172 (339)
Q Consensus 106 p~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~------~~-----~~~~~rv~v~~~D~~~~l 172 (339)
.++|.+||+|. ++++..+++ .+ .+|+++|++++.++.+++..... .. ..+....++ ..|. +-+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~-~G-~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~~ 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR-VG-ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KEL 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TT-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHh-CC-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HHH
Confidence 35799999995 334444444 33 58999999999888776643210 00 001122343 4553 212
Q ss_pred HhcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCC
Q 019550 173 EKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 173 ~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
...|+||.-.++.. -...+.++. +...++++.+++.++.+
T Consensus 113 ----~~aDlVIeaVpe~~-------~~k~~v~~~-l~~~~~~~~ii~snTs~ 152 (463)
T 1zcj_A 113 ----STVDLVVEAVFEDM-------NLKKKVFAE-LSALCKPGAFLCTNTSA 152 (463)
T ss_dssp ----TTCSEEEECCCSCH-------HHHHHHHHH-HHHHSCTTCEEEECCSS
T ss_pred ----CCCCEEEEcCCCCH-------HHHHHHHHH-HHhhCCCCeEEEeCCCC
Confidence 45899999887421 023577887 67889998888876543
No 397
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.01 E-value=3 Score=36.68 Aligned_cols=90 Identities=16% Similarity=0.252 Sum_probs=54.3
Q ss_pred CeEEEEecch--hHHHHHHHhc--CCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 107 KTVFIMGGGE--GSAAREALKH--KSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 107 ~~VL~IG~G~--G~~~~~l~~~--~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
.+|.+||+|. +.+++.+++. .+..+|+++|.+++-++..++.+. ++ ...|..+.++ ..|+|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g----------~~-~~~~~~e~~~----~aDvV 67 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYG----------LT-TTTDNNEVAK----NADIL 67 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHC----------CE-ECSCHHHHHH----HCSEE
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhC----------CE-EeCChHHHHH----hCCEE
Confidence 4799999994 3455555552 122479999999987776654322 11 2345444443 37999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
++-.+ +. ...+.++. +...|+++.+++..
T Consensus 68 ilav~-~~--------~~~~v~~~-l~~~l~~~~~vvs~ 96 (247)
T 3gt0_A 68 ILSIK-PD--------LYASIINE-IKEIIKNDAIIVTI 96 (247)
T ss_dssp EECSC-TT--------THHHHC----CCSSCTTCEEEEC
T ss_pred EEEeC-HH--------HHHHHHHH-HHhhcCCCCEEEEe
Confidence 99884 22 13466677 67788887776643
No 398
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=89.82 E-value=0.7 Score=43.54 Aligned_cols=95 Identities=20% Similarity=0.342 Sum_probs=57.6
Q ss_pred CCCeEEEEe--cchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 105 NPKTVFIMG--GGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
..++||++| +|-|..+..+++..+ .+|++++ +++-.+.+++. +.. .. +.....|..+.+... ..+|+|
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~-~~~~~~~~~~l-Ga~-~v-----~~~~~~~~~~~~~~~-~g~D~v 252 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVC-SQDASELVRKL-GAD-DV-----IDYKSGSVEEQLKSL-KPFDFI 252 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHHHHT-TCS-EE-----EETTSSCHHHHHHTS-CCBSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEe-ChHHHHHHHHc-CCC-EE-----EECCchHHHHHHhhc-CCCCEE
Confidence 457899999 456778888888776 5888888 66666777654 110 00 000012333444432 579998
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+-....+. ..++. +.+.|+++|.++.-
T Consensus 253 id~~g~~~-----------~~~~~-~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 253 LDNVGGST-----------ETWAP-DFLKKWSGATYVTL 279 (375)
T ss_dssp EESSCTTH-----------HHHGG-GGBCSSSCCEEEES
T ss_pred EECCCChh-----------hhhHH-HHHhhcCCcEEEEe
Confidence 76543210 12344 56789999998764
No 399
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.77 E-value=0.47 Score=43.80 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=24.6
Q ss_pred CCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCH
Q 019550 106 PKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQ 139 (339)
Q Consensus 106 p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 139 (339)
..+||++|+|+ |+.....+...++.+++.||-|.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 56899999984 44333333346889999999885
No 400
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.55 E-value=3.8 Score=31.82 Aligned_cols=70 Identities=20% Similarity=0.269 Sum_probs=42.4
Q ss_pred CeEEEEecchhH--HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHH--HHHHhc-CCceeE
Q 019550 107 KTVFIMGGGEGS--AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAK--AELEKR-NEKFDV 181 (339)
Q Consensus 107 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~--~~l~~~-~~~yDv 181 (339)
.+|+++|+|.-+ ++..+.+ .+ .+|+++|.+++.++..++.+ .+.++.+|.. +.+... -+.+|+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~-~g-~~v~~~d~~~~~~~~~~~~~----------~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE-KG-HDIVLIDIDKDICKKASAEI----------DALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TT-CEEEEEESCHHHHHHHHHHC----------SSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHh-CC-CeEEEEECCHHHHHHHHHhc----------CcEEEEcCCCCHHHHHHcCcccCCE
Confidence 579999987422 2233333 33 68999999998776554321 2345555543 233322 357999
Q ss_pred EEecCCC
Q 019550 182 IFGDLAD 188 (339)
Q Consensus 182 Ii~D~~d 188 (339)
|++-.++
T Consensus 73 vi~~~~~ 79 (140)
T 1lss_A 73 YIAVTGK 79 (140)
T ss_dssp EEECCSC
T ss_pred EEEeeCC
Confidence 9998653
No 401
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.48 E-value=3.2 Score=39.04 Aligned_cols=130 Identities=18% Similarity=0.146 Sum_probs=72.9
Q ss_pred CCeEEEEecchhH--HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhh----hccccCCCCeEEEEccHHHHHHhcCCce
Q 019550 106 PKTVFIMGGGEGS--AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTV----NQEAFCSKKLNLVVNDAKAELEKRNEKF 179 (339)
Q Consensus 106 p~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~----~~~~~~~~rv~v~~~D~~~~l~~~~~~y 179 (339)
..+|.+||+|.-+ ++..+++ .+ .+|++++.+++.++..++.-.. +...+ .+++++ ..|..+.+ +..
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~-~G-~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~-t~d~~ea~----~~a 100 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR-KG-QKVRLWSYESDHVDEMQAEGVNNRYLPNYPF-PETLKA-YCDLKASL----EGV 100 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT-TT-CCEEEECSCHHHHHHHHHHSSBTTTBTTCCC-CTTEEE-ESCHHHHH----TTC
T ss_pred CCeEEEECccHHHHHHHHHHHH-CC-CeEEEEeCCHHHHHHHHHcCCCcccCCCCcc-CCCeEE-ECCHHHHH----hcC
Confidence 4689999999544 3344443 33 5799999999988876653211 11111 234443 35654444 347
Q ss_pred eEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceEEEEEeeccc
Q 019550 180 DVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSF 258 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~~~~~~iP~~ 258 (339)
|+||+-.+.. ..++.++. ++..|+++-+++.-.... .. .. ..+.+.+++.++........-|++
T Consensus 101 DvVilaVp~~---------~~~~vl~~-i~~~l~~~~ivvs~~kGi---~~-~t-~~~se~i~~~l~~~~~~vlsgP~~ 164 (356)
T 3k96_A 101 TDILIVVPSF---------AFHEVITR-MKPLIDAKTRIAWGTKGL---AK-GS-RLLHEVVATELGQVPMAVISGPSL 164 (356)
T ss_dssp CEEEECCCHH---------HHHHHHHH-HGGGCCTTCEEEECCCSC---BT-TT-BCHHHHHHHHHCSCCEEEEESSCC
T ss_pred CEEEECCCHH---------HHHHHHHH-HHHhcCCCCEEEEEeCCC---Cc-Cc-cCHHHHHHHHcCCCCEEEEECccH
Confidence 9999987622 35678888 788898877665332111 11 11 233344555555332222345765
No 402
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.38 E-value=1.2 Score=41.00 Aligned_cols=92 Identities=17% Similarity=0.199 Sum_probs=56.1
Q ss_pred CCCCeEEEEe--cchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 104 QNPKTVFIMG--GGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
...++||++| +|-|.++..+++..+. +|+++..+.+ .+.+++.- .. +++..+-.+.+...-+.+|+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~~~~-~~~~~~lG-a~---------~~i~~~~~~~~~~~~~g~D~ 218 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTASKRN-HAFLKALG-AE---------QCINYHEEDFLLAISTPVDA 218 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEECHHH-HHHHHHHT-CS---------EEEETTTSCHHHHCCSCEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeccch-HHHHHHcC-CC---------EEEeCCCcchhhhhccCCCE
Confidence 3467899997 4567888888888765 7888875444 77777642 11 12211111112222357998
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
|+-... + ..+ +. +.+.|+++|.++.-
T Consensus 219 v~d~~g-----~-------~~~-~~-~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 219 VIDLVG-----G-------DVG-IQ-SIDCLKETGCIVSV 244 (321)
T ss_dssp EEESSC-----H-------HHH-HH-HGGGEEEEEEEEEC
T ss_pred EEECCC-----c-------HHH-HH-HHHhccCCCEEEEe
Confidence 875432 1 133 55 57899999998864
No 403
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=89.33 E-value=0.84 Score=43.02 Aligned_cols=96 Identities=8% Similarity=0.145 Sum_probs=60.3
Q ss_pred CCCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCcee
Q 019550 104 QNPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yD 180 (339)
...++||++|+ |-|.++..+++..+. +|+++ .+++=.+.++++-... -+.....|..+.++. +.+.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-------vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIAT-CSPHNFDLAKSRGAEE-------VFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEE-ECGGGHHHHHHTTCSE-------EEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCcE-------EEECCCchHHHHHHHHccCCcc
Confidence 34578999998 378888889988765 77777 4787788887752110 011112344454543 345699
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHcccc-CCCcEEEEe
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKL-NDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L-~~gGilv~~ 221 (339)
+|+-... + .+.++. +.+.| +++|.++.-
T Consensus 234 ~v~d~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 234 YALDCIT-----N-------VESTTF-CFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEEESSC-----S-------HHHHHH-HHHHSCTTCEEEEES
T ss_pred EEEECCC-----c-------hHHHHH-HHHHhhcCCCEEEEE
Confidence 9875443 1 144555 45678 699998764
No 404
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=89.25 E-value=0.25 Score=46.32 Aligned_cols=95 Identities=17% Similarity=0.132 Sum_probs=59.9
Q ss_pred CCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-c-CCcee
Q 019550 105 NPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-R-NEKFD 180 (339)
Q Consensus 105 ~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~-~~~yD 180 (339)
..++||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++.-... -+.....|..+.+.. . .+.+|
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga~~-------~~d~~~~~~~~~~~~~~~~~~~D 241 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTEEGQKIVLQNGAHE-------VFNHREVNYIDKIKKYVGEKGID 241 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCSE-------EEETTSTTHHHHHHHHHCTTCEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHcCCCE-------EEeCCCchHHHHHHHHcCCCCcE
Confidence 4578999996 56777777777666 58999999999888877642100 000011233333332 2 24799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+|+.... + +.++. +.+.|+++|.++.-
T Consensus 242 ~vi~~~G-----~--------~~~~~-~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 242 IIIEMLA-----N--------VNLSK-DLSLLSHGGRVIVV 268 (351)
T ss_dssp EEEESCH-----H--------HHHHH-HHHHEEEEEEEEEC
T ss_pred EEEECCC-----h--------HHHHH-HHHhccCCCEEEEE
Confidence 9986643 1 22445 46789999998864
No 405
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=89.03 E-value=0.95 Score=41.63 Aligned_cols=98 Identities=17% Similarity=0.173 Sum_probs=59.6
Q ss_pred CceeEEEecCCCCCCCCcc-c----c--CCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhHCCceE
Q 019550 177 EKFDVIFGDLADPVEGGPC-Y----Q--LYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVV 249 (339)
Q Consensus 177 ~~yDvIi~D~~d~~~~~p~-~----~--L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~F~~v~ 249 (339)
++||+|++|...+.. +.. . + +.+. ..+. +-++|+|||.+++-.- -+.++....+.+.|++.|..|+
T Consensus 205 ~k~DvV~SDMApn~s-Gh~yqQC~DHarii~L-al~f-A~~vLkPGGtfV~Kvy----ggaDr~se~lv~~LaR~F~~Vr 277 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYK-YHHYQQCEDHAIKLSM-LTKK-ACLHLNPGGTCVSIGY----GYADRASESIIGAIARQFKFSR 277 (320)
T ss_dssp CCEEEEEEECCCCCC-SCHHHHHHHHHHHHHH-THHH-HGGGEEEEEEEEEEEC----CCCSHHHHHHHHHHHTTEEEEE
T ss_pred CcCCEEEEcCCCCCC-CccccccchHHHHHHH-HHHH-HHHhcCCCceEEEEEe----cCCcccHHHHHHHHHHhcceee
Confidence 679999999986543 211 0 0 0001 2333 4689999999998741 1233466889999999999888
Q ss_pred EEEEeeccc--CCceeEEEEec---CCCCCCHHHHHHHHH
Q 019550 250 AYTAHVPSF--ADTWGWVMASD---QPFSINAEEIDNRIK 284 (339)
Q Consensus 250 ~~~~~iP~~--~~~~~~~~as~---~p~~~~~~~l~~r~~ 284 (339)
... |.- ...-.|++|+. .-...+...+...+.
T Consensus 278 ~vK---P~ASR~StEvf~La~gf~g~~r~~~~~~l~~~l~ 314 (320)
T 2hwk_A 278 VCK---PKSSLEETEVLFVFIGYDRKARTHNPYKLSSTLT 314 (320)
T ss_dssp EEC---CTTCCSTTCEEEEEEEECCCCCCCCHHHHHHHHH
T ss_pred eeC---CCCccccceEEEEEEeecCCccccCHHHhcchhh
Confidence 653 421 22234777764 223456666655543
No 406
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.02 E-value=0.97 Score=40.94 Aligned_cols=103 Identities=15% Similarity=0.238 Sum_probs=63.0
Q ss_pred CCeEEEEecch--hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhcc-------ccCC-------CCeEEEEccHH
Q 019550 106 PKTVFIMGGGE--GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQE-------AFCS-------KKLNLVVNDAK 169 (339)
Q Consensus 106 p~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~-------~~~~-------~rv~v~~~D~~ 169 (339)
.++|.+||+|. ..++..+++ .+ .+|+++|.+++.++.+++.+..... .... .+++. ..|..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~-~G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAF-HG-FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TT-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CC-CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 46899999984 334444444 34 5899999999998887765321100 0000 12332 34433
Q ss_pred HHHHhcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 170 AELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 170 ~~l~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
+.+ +..|+||...+... -...++++. +...++++.+++.++.
T Consensus 81 ~~~----~~aDlVi~av~~~~-------~~~~~v~~~-l~~~~~~~~il~s~tS 122 (283)
T 4e12_A 81 QAV----KDADLVIEAVPESL-------DLKRDIYTK-LGELAPAKTIFATNSS 122 (283)
T ss_dssp HHT----TTCSEEEECCCSCH-------HHHHHHHHH-HHHHSCTTCEEEECCS
T ss_pred HHh----ccCCEEEEeccCcH-------HHHHHHHHH-HHhhCCCCcEEEECCC
Confidence 322 45899999887431 024577888 6888999888876653
No 407
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=89.01 E-value=3 Score=41.01 Aligned_cols=111 Identities=16% Similarity=0.225 Sum_probs=65.2
Q ss_pred CCCeEEEEecchh--HHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhh-hhhccc----c----CCCCeEEEEccHHHHHH
Q 019550 105 NPKTVFIMGGGEG--SAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEA----F----CSKKLNLVVNDAKAELE 173 (339)
Q Consensus 105 ~p~~VL~IG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f-~~~~~~----~----~~~rv~v~~~D~~~~l~ 173 (339)
...+|.+||+|.= .++..+++ .+ -+|+++|+|++.++..++.- +..... + ...++++ ..|..+.++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~-~G-~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~~ 83 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLAD-IG-HDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAVA 83 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-TT-CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHh-CC-CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHhh
Confidence 3468999999943 34444444 33 57999999999988877642 110000 0 0134443 345444343
Q ss_pred hcCCceeEEEecCCCCCC-CCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 174 KRNEKFDVIFGDLADPVE-GGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 174 ~~~~~yDvIi~D~~d~~~-~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
..|+||+-.+.|.. .+.+.--+..+.++. +...|+++-+++..++
T Consensus 84 ----~aDvviiaVptp~~~~~~~dl~~v~~v~~~-i~~~l~~~~iVV~~ST 129 (478)
T 2y0c_A 84 ----HGDVQFIAVGTPPDEDGSADLQYVLAAARN-IGRYMTGFKVIVDKST 129 (478)
T ss_dssp ----HCSEEEECCCCCBCTTSSBCCHHHHHHHHH-HHHHCCSCEEEEECSC
T ss_pred ----cCCEEEEEeCCCcccCCCccHHHHHHHHHH-HHHhcCCCCEEEEeCC
Confidence 37999999876532 122222245667777 6778998777655443
No 408
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=88.81 E-value=1.8 Score=41.75 Aligned_cols=44 Identities=23% Similarity=0.203 Sum_probs=34.8
Q ss_pred CCCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHh
Q 019550 104 QNPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRF 148 (339)
Q Consensus 104 ~~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~ 148 (339)
...++||++|+ |-|..+..+++..+ .++++++.+++-.+.+++.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~~~~~~~~~~l 264 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRAL 264 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc
Confidence 34578999995 46777888888776 5788889999998888764
No 409
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.79 E-value=2.3 Score=31.98 Aligned_cols=70 Identities=21% Similarity=0.193 Sum_probs=42.3
Q ss_pred CCeEEEEecchhH--HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHH--HHHhcCCceeE
Q 019550 106 PKTVFIMGGGEGS--AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA--ELEKRNEKFDV 181 (339)
Q Consensus 106 p~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~--~l~~~~~~yDv 181 (339)
.++|+++|+|.-+ ++..+++ .+..+|++++.+++-++..+. ..++++..|..+ .+...-+.+|+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~-~g~~~v~~~~r~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT-SSNYSVTVADHDLAALAVLNR-----------MGVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-CSSEEEEEEESCHHHHHHHHT-----------TTCEEEECCTTCHHHHHHHTTTCSE
T ss_pred cCeEEEECCCHHHHHHHHHHHh-CCCceEEEEeCCHHHHHHHHh-----------CCCcEEEecCCCHHHHHHHHcCCCE
Confidence 3589999985221 2233333 444689999999887665541 334555555442 23333357999
Q ss_pred EEecCC
Q 019550 182 IFGDLA 187 (339)
Q Consensus 182 Ii~D~~ 187 (339)
|+...+
T Consensus 73 vi~~~~ 78 (118)
T 3ic5_A 73 VISAAP 78 (118)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 998763
No 410
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=88.43 E-value=2.5 Score=33.46 Aligned_cols=69 Identities=17% Similarity=0.228 Sum_probs=45.4
Q ss_pred CeEEEEecch-hH-HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHH--HHHhc-CCceeE
Q 019550 107 KTVFIMGGGE-GS-AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA--ELEKR-NEKFDV 181 (339)
Q Consensus 107 ~~VL~IG~G~-G~-~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~--~l~~~-~~~yDv 181 (339)
++|+++|+|. |. +++.+.+ .+ .+|+++|.|++.++.+++. .+.++.+|+.+ .++.. -+..|+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~-~g-~~V~~id~~~~~~~~~~~~-----------~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTA-AG-KKVLAVDKSKEKIELLEDE-----------GFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-TT-CCEEEEESCHHHHHHHHHT-----------TCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHH-CC-CeEEEEECCHHHHHHHHHC-----------CCcEEECCCCCHHHHHhCCcccCCE
Confidence 5799999974 22 3333333 33 5799999999987766542 25667777653 34443 357999
Q ss_pred EEecCCC
Q 019550 182 IFGDLAD 188 (339)
Q Consensus 182 Ii~D~~d 188 (339)
|++-..+
T Consensus 74 vi~~~~~ 80 (141)
T 3llv_A 74 VLITGSD 80 (141)
T ss_dssp EEECCSC
T ss_pred EEEecCC
Confidence 9887663
No 411
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.24 E-value=2.4 Score=38.54 Aligned_cols=102 Identities=17% Similarity=0.306 Sum_probs=62.1
Q ss_pred CCeEEEEecchh--HHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhh------ccccCC------------CCeEEEE
Q 019550 106 PKTVFIMGGGEG--SAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVN------QEAFCS------------KKLNLVV 165 (339)
Q Consensus 106 p~~VL~IG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~------~~~~~~------------~rv~v~~ 165 (339)
-++|.+||+|.= .++..+++ .+ .+|+++|.+++.++.+++.+... ...+.. .++++ .
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~-~G-~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~ 91 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA-TG-HTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-S 91 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TT-CEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-E
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CC-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-e
Confidence 368999999953 34555555 33 58999999999888765543210 000000 13443 2
Q ss_pred ccHHHHHHhcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 166 NDAKAELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 166 ~D~~~~l~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
.|..+.+ +..|+||.-.++.. . ...++++. +...++++.+++.++
T Consensus 92 ~~~~~~~----~~aD~Vi~avp~~~------~-~~~~v~~~-l~~~~~~~~iv~s~t 136 (302)
T 1f0y_A 92 TDAASVV----HSTDLVVEAIVENL------K-VKNELFKR-LDKFAAEHTIFASNT 136 (302)
T ss_dssp SCHHHHT----TSCSEEEECCCSCH------H-HHHHHHHH-HTTTSCTTCEEEECC
T ss_pred cCHHHhh----cCCCEEEEcCcCcH------H-HHHHHHHH-HHhhCCCCeEEEECC
Confidence 4433222 45899999886431 0 13477888 788888888877654
No 412
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=88.18 E-value=0.87 Score=41.88 Aligned_cols=91 Identities=12% Similarity=0.197 Sum_probs=54.5
Q ss_pred eEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEEEe
Q 019550 108 TVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVIFG 184 (339)
Q Consensus 108 ~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvIi~ 184 (339)
+||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++. +... .++.. ..| .+.++. ..+.+|+|+-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga~~-~i~~~-----~~~-~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAEHDYLRVL-GAKE-VLARE-----DVM-AERIRPLDKQRWAAAVD 222 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTCHHHHHHT-TCSE-EEECC---------------CCSCCEEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHc-CCcE-EEecC-----CcH-HHHHHHhcCCcccEEEE
Confidence 7999996 56777888888776 4799999998888888764 2110 00000 011 112222 2346999875
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
.... + .++. +.+.|+++|.++.-
T Consensus 223 ~~g~-----~--------~~~~-~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 223 PVGG-----R--------TLAT-VLSRMRYGGAVAVS 245 (328)
T ss_dssp CSTT-----T--------THHH-HHHTEEEEEEEEEC
T ss_pred CCcH-----H--------HHHH-HHHhhccCCEEEEE
Confidence 5431 1 1344 45789999998864
No 413
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=88.13 E-value=3 Score=38.58 Aligned_cols=111 Identities=14% Similarity=0.140 Sum_probs=64.2
Q ss_pred eEEEEEeCCceEEE-EEcCeeeccccChhhHHHHHhhhhcccCCCCCeEEEEecch--hHHHHHHHhcCCCCEEEEEEcC
Q 019550 62 DIALLDTKRFGKVL-VIDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGE--GSAAREALKHKSLEKVVMCDID 138 (339)
Q Consensus 62 ~I~V~e~~~~g~~L-~ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid 138 (339)
.|.+++... |..+ ++||...+..+.... -++. .-.+..++.+++++||+|. ...++.+++..+..+|.+++.+
T Consensus 80 ~v~L~d~~t-G~p~a~ld~~~lT~~RTaA~--s~la-a~~La~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~ 155 (313)
T 3hdj_A 80 VILLFSAAD-GRPLATCDAGTLTRKRTAAC--TVLA-AGALARPRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY 155 (313)
T ss_dssp EEEEEETTT-CCEEEEECSHHHHHHHHHHH--HHHH-HHHHSCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT
T ss_pred EEEEEECCC-CCEEEEEcCchhhhHHHHHH--HHHH-HHhhccCCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc
Confidence 344555443 5544 678877665543211 1111 1223346788999999984 3344445554568899999999
Q ss_pred HHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEecCCC
Q 019550 139 QEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLAD 188 (339)
Q Consensus 139 ~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~d 188 (339)
..-++++++-... .-+++.. |..+.++ ..|+|++-.+.
T Consensus 156 -~a~~la~~l~~~~-----g~~~~~~--~~~eav~----~aDIVi~aT~s 193 (313)
T 3hdj_A 156 -ASPEILERIGRRC-----GVPARMA--APADIAA----QADIVVTATRS 193 (313)
T ss_dssp -CCHHHHHHHHHHH-----TSCEEEC--CHHHHHH----HCSEEEECCCC
T ss_pred -HHHHHHHHHHHhc-----CCeEEEe--CHHHHHh----hCCEEEEccCC
Confidence 6555555532211 1223333 7666664 37999988764
No 414
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.02 E-value=4.3 Score=39.52 Aligned_cols=109 Identities=14% Similarity=0.167 Sum_probs=62.2
Q ss_pred CeEEEEecchhH--HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhh-hhcccc--------CCCCeEEEEccHHHHHHhc
Q 019550 107 KTVFIMGGGEGS--AAREALKHKSLEKVVMCDIDQEVVDFCRRFLT-VNQEAF--------CSKKLNLVVNDAKAELEKR 175 (339)
Q Consensus 107 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~-~~~~~~--------~~~rv~v~~~D~~~~l~~~ 175 (339)
.+|.+||+|.=+ ++..+++ .+ -+|+++|+|++.++..++... .....+ ...++++ ..|..+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~-~G-~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~--- 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE-LG-ANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV--- 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TT-CEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG---
T ss_pred CEEEEECcCHHHHHHHHHHHh-cC-CEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHH---
Confidence 479999998433 3444444 33 589999999998887766311 000000 0234543 34544433
Q ss_pred CCceeEEEecCCCCCCC-CccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 176 NEKFDVIFGDLADPVEG-GPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 176 ~~~yDvIi~D~~d~~~~-~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
+..|+||+-.+.|... +.+.--+-.+.++. +...|+++-+++..+.
T Consensus 77 -~~aDvViiaVptp~~~~~~~dl~~v~~v~~~-i~~~l~~g~iVV~~ST 123 (450)
T 3gg2_A 77 -PEADIIFIAVGTPAGEDGSADMSYVLDAARS-IGRAMSRYILIVTKST 123 (450)
T ss_dssp -GGCSEEEECCCCCBCTTSSBCCHHHHHHHHH-HHHHCCSCEEEEECSC
T ss_pred -hcCCEEEEEcCCCcccCCCcChHHHHHHHHH-HHhhCCCCCEEEEeee
Confidence 3479999988765311 11111133566677 6778887766665443
No 415
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.89 E-value=2.9 Score=33.75 Aligned_cols=97 Identities=9% Similarity=0.087 Sum_probs=55.9
Q ss_pred CCeEEEEecchhH--HHHHHHhcCCCCEEEEEEcC-HHHHHHHHHhhhhhccccCCCCeEEEEccHHH--HHHhc-CCce
Q 019550 106 PKTVFIMGGGEGS--AAREALKHKSLEKVVMCDID-QEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA--ELEKR-NEKF 179 (339)
Q Consensus 106 p~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid-~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~--~l~~~-~~~y 179 (339)
.++|+++|+|.=+ +++.+.+ . ..+|+++|.+ ++-.+..++.+ ...++++.+|+.+ .+... -+..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~-~-g~~V~vid~~~~~~~~~~~~~~--------~~~~~~i~gd~~~~~~l~~a~i~~a 72 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ-R-GQNVTVISNLPEDDIKQLEQRL--------GDNADVIPGDSNDSSVLKKAGIDRC 72 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-T-TCCEEEEECCCHHHHHHHHHHH--------CTTCEEEESCTTSHHHHHHHTTTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHH-C-CCCEEEEECCChHHHHHHHHhh--------cCCCeEEEcCCCCHHHHHHcChhhC
Confidence 4579999976322 2233333 3 3579999998 45444333321 2357888998763 34443 3679
Q ss_pred eEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 180 DVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
|+|++-..+.. .-..... ..+.+.+...+++..
T Consensus 73 d~vi~~~~~d~---------~n~~~~~-~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 73 RAILALSDNDA---------DNAFVVL-SAKDMSSDVKTVLAV 105 (153)
T ss_dssp SEEEECSSCHH---------HHHHHHH-HHHHHTSSSCEEEEC
T ss_pred CEEEEecCChH---------HHHHHHH-HHHHHCCCCEEEEEE
Confidence 99998876431 0122222 345677777666654
No 416
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.40 E-value=6.6 Score=38.44 Aligned_cols=110 Identities=16% Similarity=0.231 Sum_probs=62.2
Q ss_pred CeEEEEecch--hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhh-hhhcccc-------CCCCeEEEEccHHHHHHhcC
Q 019550 107 KTVFIMGGGE--GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEAF-------CSKKLNLVVNDAKAELEKRN 176 (339)
Q Consensus 107 ~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f-~~~~~~~-------~~~rv~v~~~D~~~~l~~~~ 176 (339)
.+|.+||+|. +.++..+++.....+|+++|++++.++..++.. +.....+ ...++++ ..|..+.++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~~--- 85 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAIA--- 85 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH---
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHhh---
Confidence 4899999994 344555555422468999999999888766421 1000000 0123332 345434343
Q ss_pred CceeEEEecCCCCCCC-C----ccccC-CcHHHHHHHHccccCCCcEEEEec
Q 019550 177 EKFDVIFGDLADPVEG-G----PCYQL-YTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 177 ~~yDvIi~D~~d~~~~-~----p~~~L-~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
..|+||+-.+.|... + ....+ +..+..+. +.+.|+++-+++..+
T Consensus 86 -~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~-i~~~l~~g~iVV~~S 135 (481)
T 2o3j_A 86 -EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRT-IAQYAGGPKIVVEKS 135 (481)
T ss_dssp -HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHH-HHHHCCSCEEEEECS
T ss_pred -cCCEEEEecCCccccccccccCCCcHHHHHHHHHH-HHHhCCCCCEEEECC
Confidence 479999998765310 0 00111 24566777 677888877766543
No 417
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=87.34 E-value=0.8 Score=46.42 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=24.4
Q ss_pred CCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcC
Q 019550 106 PKTVFIMGGGE-GSAAREALKHKSLEKVVMCDID 138 (339)
Q Consensus 106 p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid 138 (339)
..+||+||+|+ |+.....+...++.+++.||-|
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 57899999985 3333333444789999999988
No 418
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=87.21 E-value=0.6 Score=42.84 Aligned_cols=89 Identities=17% Similarity=0.245 Sum_probs=57.7
Q ss_pred eEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCceeEEEe
Q 019550 108 TVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFDVIFG 184 (339)
Q Consensus 108 ~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yDvIi~ 184 (339)
+||++|+ |-|..+.++++..+. +|++++.+++-.+.+++.- .. .++..+-.+.++. ..+.+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lG-a~---------~vi~~~~~~~~~~~~~~~~d~v~d 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLG-AN---------RILSRDEFAESRPLEKQLWAGAID 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHT-CS---------EEEEGGGSSCCCSSCCCCEEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcC-CC---------EEEecCCHHHHHhhcCCCccEEEE
Confidence 5999995 578888899998875 8999999999888888742 11 1111000001111 2357998664
Q ss_pred cCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 185 DLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 185 D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
.. +. +.++. +.+.|+++|.++.-
T Consensus 218 -~~-----g~-------~~~~~-~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 218 -TV-----GD-------KVLAK-VLAQMNYGGCVAAC 240 (324)
T ss_dssp -SS-----CH-------HHHHH-HHHTEEEEEEEEEC
T ss_pred -CC-----Cc-------HHHHH-HHHHHhcCCEEEEE
Confidence 32 11 34666 57899999998864
No 419
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.03 E-value=1.3 Score=41.18 Aligned_cols=103 Identities=14% Similarity=0.149 Sum_probs=64.5
Q ss_pred CCeEEEEecch--hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhh-----ccccCC---------CCeEEEEccHH
Q 019550 106 PKTVFIMGGGE--GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVN-----QEAFCS---------KKLNLVVNDAK 169 (339)
Q Consensus 106 p~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~-----~~~~~~---------~rv~v~~~D~~ 169 (339)
.++|-+||+|. ++++..+++ .+ -+|+++|++++.++.+++....+ ...+-+ .++++ ..|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~-~G-~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFAS-GG-FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-TT-CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHH
Confidence 46899999994 445555555 33 57999999999998876653211 000001 13443 34433
Q ss_pred HHHHhcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 170 AELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 170 ~~l~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
+.+ +..|+||...+... -..+++|+. +...++++-+++.++.
T Consensus 83 eav----~~aDlVieavpe~~-------~~k~~v~~~-l~~~~~~~~Ii~s~tS 124 (319)
T 2dpo_A 83 EAV----EGVVHIQECVPENL-------DLKRKIFAQ-LDSIVDDRVVLSSSSS 124 (319)
T ss_dssp HHT----TTEEEEEECCCSCH-------HHHHHHHHH-HHTTCCSSSEEEECCS
T ss_pred HHH----hcCCEEEEeccCCH-------HHHHHHHHH-HHhhCCCCeEEEEeCC
Confidence 332 45899999987421 124578888 7889999888876653
No 420
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=87.01 E-value=1.2 Score=39.95 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=24.3
Q ss_pred CCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcC
Q 019550 106 PKTVFIMGGGE-GSAAREALKHKSLEKVVMCDID 138 (339)
Q Consensus 106 p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid 138 (339)
.++||++|+|+ |......+...+..+++.+|-|
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 57999999984 4444444444788999999987
No 421
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=86.50 E-value=3.8 Score=37.70 Aligned_cols=98 Identities=17% Similarity=0.223 Sum_probs=58.4
Q ss_pred CeEEEEecchhH--HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhh--hccccC-CCCeEEEEccHHHHHHhcCCceeE
Q 019550 107 KTVFIMGGGEGS--AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTV--NQEAFC-SKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 107 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~--~~~~~~-~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
.+|.+||+|.-+ ++..+++ .+ .+|++++.+++.++..++.... ...... ..++.....|..+.+ +.+|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~-~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~ 78 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL-KG-QSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV----KDADV 78 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TT-CEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH----TTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHH----hcCCE
Confidence 589999998533 3344444 33 5799999999887766654221 100000 001112344544433 35899
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
|++-.+... ..+.++. +...|+++.+++.
T Consensus 79 vi~~v~~~~---------~~~~~~~-l~~~l~~~~~vv~ 107 (359)
T 1bg6_A 79 ILIVVPAIH---------HASIAAN-IASYISEGQLIIL 107 (359)
T ss_dssp EEECSCGGG---------HHHHHHH-HGGGCCTTCEEEE
T ss_pred EEEeCCchH---------HHHHHHH-HHHhCCCCCEEEE
Confidence 999887431 3577888 7888998776554
No 422
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=86.22 E-value=5.8 Score=35.78 Aligned_cols=89 Identities=13% Similarity=0.220 Sum_probs=56.0
Q ss_pred CeEEEEecch--hHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 107 KTVFIMGGGE--GSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 107 ~~VL~IG~G~--G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
.+|.+||+|. +.++..+++.. +..+|+++|.+++-++..++.++ +++ ..|..+.+ +..|+||
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~g----------i~~-~~~~~~~~----~~aDvVi 68 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCG----------VHT-TQDNRQGA----LNADVVV 68 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTC----------CEE-ESCHHHHH----SSCSEEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcC----------CEE-eCChHHHH----hcCCeEE
Confidence 5799999984 33445555421 22479999999988776665321 222 34544444 3579999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccc-cCCCcEEEE
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPK-LNDNGIFVT 220 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~-L~~gGilv~ 220 (339)
+-.+.. ...+.++. ++.. |+++-+++.
T Consensus 69 lav~p~---------~~~~vl~~-l~~~~l~~~~iiiS 96 (280)
T 3tri_A 69 LAVKPH---------QIKMVCEE-LKDILSETKILVIS 96 (280)
T ss_dssp ECSCGG---------GHHHHHHH-HHHHHHTTTCEEEE
T ss_pred EEeCHH---------HHHHHHHH-HHhhccCCCeEEEE
Confidence 987521 13577888 6777 776656653
No 423
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=86.16 E-value=2.4 Score=37.88 Aligned_cols=89 Identities=16% Similarity=0.182 Sum_probs=54.4
Q ss_pred CeEEEEecch--hHHHHHHHhcCCC-CEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCC-ceeEE
Q 019550 107 KTVFIMGGGE--GSAAREALKHKSL-EKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNE-KFDVI 182 (339)
Q Consensus 107 ~~VL~IG~G~--G~~~~~l~~~~~~-~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~-~yDvI 182 (339)
++|.+||+|. +.++..+.+ .+. .+|+++|.+++.++.++++ +.. . . ...|..+.+ + ..|+|
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-~g~~~~V~~~d~~~~~~~~~~~~-g~~------~--~-~~~~~~~~~----~~~aDvV 66 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-SGFKGKIYGYDINPESISKAVDL-GII------D--E-GTTSIAKVE----DFSPDFV 66 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-TTCCSEEEEECSCHHHHHHHHHT-TSC------S--E-EESCGGGGG----GTCCSEE
T ss_pred cEEEEEecCHHHHHHHHHHHh-cCCCcEEEEEeCCHHHHHHHHHC-CCc------c--c-ccCCHHHHh----cCCCCEE
Confidence 4799999984 334444444 332 3799999999888776643 110 0 1 123332222 3 68999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
++-.+.. ...+.++. +...|+++.+++.
T Consensus 67 ilavp~~---------~~~~v~~~-l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 67 MLSSPVR---------TFREIAKK-LSYILSEDATVTD 94 (281)
T ss_dssp EECSCHH---------HHHHHHHH-HHHHSCTTCEEEE
T ss_pred EEcCCHH---------HHHHHHHH-HHhhCCCCcEEEE
Confidence 9987632 13466777 6677888876654
No 424
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=86.05 E-value=2.6 Score=39.01 Aligned_cols=76 Identities=17% Similarity=0.257 Sum_probs=49.7
Q ss_pred CCCeEEEEecchhHHHHHHHh----cCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH--HHhcCCc
Q 019550 105 NPKTVFIMGGGEGSAAREALK----HKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE--LEKRNEK 178 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~----~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~--l~~~~~~ 178 (339)
+.++||+.|+ +|.+++.+++ .++..+|++++.++.-.+..++.+. .++++++.+|..+. +...-+.
T Consensus 20 ~~k~vlVTGa-tG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-------~~~v~~~~~Dl~d~~~l~~~~~~ 91 (344)
T 2gn4_A 20 DNQTILITGG-TGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-------DPRMRFFIGDVRDLERLNYALEG 91 (344)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-------CTTEEEEECCTTCHHHHHHHTTT
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-------CCCEEEEECCCCCHHHHHHHHhc
Confidence 4578998885 4555555543 2243489999999875544333221 36899999998753 3333357
Q ss_pred eeEEEecCCC
Q 019550 179 FDVIFGDLAD 188 (339)
Q Consensus 179 yDvIi~D~~d 188 (339)
.|+||..+.-
T Consensus 92 ~D~Vih~Aa~ 101 (344)
T 2gn4_A 92 VDICIHAAAL 101 (344)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999998863
No 425
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=85.88 E-value=2.4 Score=41.08 Aligned_cols=102 Identities=15% Similarity=0.173 Sum_probs=60.6
Q ss_pred CCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEE----ccH------HHHH
Q 019550 105 NPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVV----NDA------KAEL 172 (339)
Q Consensus 105 ~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~----~D~------~~~l 172 (339)
..++||++|+ |-|.++..+++..+ .++++++.+++-.+.+++.-...-....++.+.+.. .|. .+.+
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~G-a~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i 306 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGG-ANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI 306 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence 4578999996 56778888888776 578888899999999987521100000111111000 111 1223
Q ss_pred Hh-c-CCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 173 EK-R-NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 173 ~~-~-~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+. + ...+|+|+-... . +.++. +.+.|+++|.+++-
T Consensus 307 ~~~t~g~g~Dvvid~~G------~-------~~~~~-~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 307 RELTGGEDIDIVFEHPG------R-------ETFGA-SVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHTSCCEEEEEECSC------H-------HHHHH-HHHHEEEEEEEEES
T ss_pred HHHhCCCCCcEEEEcCC------c-------hhHHH-HHHHhhCCcEEEEE
Confidence 22 2 257998875432 1 34565 56789999998864
No 426
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=85.66 E-value=1.1 Score=41.85 Aligned_cols=95 Identities=14% Similarity=0.142 Sum_probs=55.3
Q ss_pred CCCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cCCcee
Q 019550 104 QNPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RNEKFD 180 (339)
Q Consensus 104 ~~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~yD 180 (339)
...++||++|+ |.|.++..+++..+..+|.++. +++-.+.++ +... .-+. ...|..+.++. ..+.+|
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~------~~~~-~~~~~~~~~~~~~~~g~D 210 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVT------HLFD-RNADYVQEVKRISAEGVD 210 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSS------EEEE-TTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCc------EEEc-CCccHHHHHHHhcCCCce
Confidence 34678999997 4577778888876667888887 444445554 2211 0011 12344444433 346799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
+|+-....+ . ++. +.+.|+++|.+++-.
T Consensus 211 vv~d~~g~~------------~-~~~-~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 211 IVLDCLCGD------------N-TGK-GLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEECC---------------------CTTEEEEEEEEEEC
T ss_pred EEEECCCch------------h-HHH-HHHHhhcCCEEEEEC
Confidence 988654321 1 244 568999999998653
No 427
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=85.57 E-value=1.3 Score=41.72 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=24.5
Q ss_pred CCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCH
Q 019550 106 PKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQ 139 (339)
Q Consensus 106 p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 139 (339)
.++||++|+|+ |+.....+...++.+++.||-|.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 57899999984 33333333347899999999874
No 428
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=85.32 E-value=5.6 Score=39.34 Aligned_cols=90 Identities=18% Similarity=0.264 Sum_probs=55.0
Q ss_pred CCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 104 QNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 104 ~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
...++|+++|+|. |......++..+ .+|+++|.++.-.+.+++. + +++ .+..+.+ +..|+|
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~G-a~Viv~d~~~~~~~~A~~~-G----------a~~--~~l~e~l----~~aDvV 333 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQG-ARVSVTEIDPINALQAMME-G----------FDV--VTVEEAI----GDADIV 333 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT-T----------CEE--CCHHHHG----GGCSEE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-C----------CEE--ecHHHHH----hCCCEE
Confidence 3568999999974 333444455565 5899999999887766653 1 111 2322322 358999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCC
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
+.-...+ .+...+.+ +.|++||+++ |.+.
T Consensus 334 i~atgt~-------~~i~~~~l-----~~mk~ggilv-nvG~ 362 (494)
T 3ce6_A 334 VTATGNK-------DIIMLEHI-----KAMKDHAILG-NIGH 362 (494)
T ss_dssp EECSSSS-------CSBCHHHH-----HHSCTTCEEE-ECSS
T ss_pred EECCCCH-------HHHHHHHH-----HhcCCCcEEE-EeCC
Confidence 9865322 33444433 3578999876 5553
No 429
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=85.31 E-value=10 Score=36.89 Aligned_cols=108 Identities=14% Similarity=0.215 Sum_probs=58.6
Q ss_pred CeEEEEecch--hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhh-hhhcc----cc---CCCCeEEEEccHHHHHHhcC
Q 019550 107 KTVFIMGGGE--GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQE----AF---CSKKLNLVVNDAKAELEKRN 176 (339)
Q Consensus 107 ~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f-~~~~~----~~---~~~rv~v~~~D~~~~l~~~~ 176 (339)
.+|.+||+|. +.++..+++..+..+|+++|++++.++..++.- +.... .. ...++++ ..|..+.++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~--- 81 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIK--- 81 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH---
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHh---
Confidence 4799999994 334555555322467999999999887654320 00000 00 0123432 345444443
Q ss_pred CceeEEEecCCCCCCCC------ccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 177 EKFDVIFGDLADPVEGG------PCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 177 ~~yDvIi~D~~d~~~~~------p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
..|+|++-.+.|.... .+.--+..+..+. +...|+++.+++.
T Consensus 82 -~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~-i~~~l~~g~iVV~ 129 (467)
T 2q3e_A 82 -EADLVFISVNTPTKTYGMGKGRAADLKYIEACARR-IVQNSNGYKIVTE 129 (467)
T ss_dssp -HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHH-HHHTCCSEEEEEE
T ss_pred -cCCEEEEEcCCchhhccccccCCCcHHHHHHHHHH-HHhhCCCCCEEEE
Confidence 4699999987654210 0000012455666 5677887666544
No 430
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=85.10 E-value=1.7 Score=40.82 Aligned_cols=95 Identities=17% Similarity=0.143 Sum_probs=60.0
Q ss_pred CCCCeEEEEecc--hhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 104 QNPKTVFIMGGG--EGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
+..++|.+||+| ++.+++.+.+ .+ .+|+++|.+++.++.+++. + +. ...|..+.++...+..|+
T Consensus 6 ~~~~kIgIIG~G~mG~slA~~L~~-~G-~~V~~~dr~~~~~~~a~~~-G----------~~-~~~~~~e~~~~a~~~aDl 71 (341)
T 3ktd_A 6 DISRPVCILGLGLIGGSLLRDLHA-AN-HSVFGYNRSRSGAKSAVDE-G----------FD-VSADLEATLQRAAAEDAL 71 (341)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHH-TT-CCEEEECSCHHHHHHHHHT-T----------CC-EESCHHHHHHHHHHTTCE
T ss_pred CCCCEEEEEeecHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHHHHc-C----------Ce-eeCCHHHHHHhcccCCCE
Confidence 445689999999 4556666655 34 5799999999988877653 1 11 234555555432234699
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCC
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
|++-.+.. ...+.++. +.. ++++. +++..++
T Consensus 72 VilavP~~---------~~~~vl~~-l~~-~~~~~-iv~Dv~S 102 (341)
T 3ktd_A 72 IVLAVPMT---------AIDSLLDA-VHT-HAPNN-GFTDVVS 102 (341)
T ss_dssp EEECSCHH---------HHHHHHHH-HHH-HCTTC-CEEECCS
T ss_pred EEEeCCHH---------HHHHHHHH-HHc-cCCCC-EEEEcCC
Confidence 99988721 14567777 555 46664 4555543
No 431
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=84.93 E-value=19 Score=33.07 Aligned_cols=112 Identities=13% Similarity=0.243 Sum_probs=57.6
Q ss_pred CCCeEEEEecchhHHHH--HHHhcCCCCEEEEEEcCHHHHHH-HHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 105 NPKTVFIMGGGEGSAAR--EALKHKSLEKVVMCDIDQEVVDF-CRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~--~l~~~~~~~~v~~VEid~~vi~~-ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
.+.+|.+||+|.-+.+. .++...-..+|..+|++++.++. +... ... ..+...++++..++ .+-+ +.-|+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl-~~~-~~~~~~~~~v~~~~-~~a~----~~aDv 77 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDL-KHA-TPYSPTTVRVKAGE-YSDC----HDADL 77 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHH-HHH-GGGSSSCCEEEECC-GGGG----TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhH-Hhh-hhhcCCCeEEEeCC-HHHh----CCCCE
Confidence 35689999998544432 22332223689999999865553 2221 111 11112455666544 2222 45799
Q ss_pred EEecCCCCCCCCcc-cc--CCcHHHHHHH---HccccCCCcEEEEecCCC
Q 019550 182 IFGDLADPVEGGPC-YQ--LYTKSFYERI---LKPKLNDNGIFVTQAGPA 225 (339)
Q Consensus 182 Ii~D~~d~~~~~p~-~~--L~t~ef~~~~---~~~~L~~gGilv~~~~~~ 225 (339)
|++-...|...+.. .. ..+...++.+ +. ..+|++++++ ...|
T Consensus 78 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~-~~~p~a~viv-~tNP 125 (317)
T 3d0o_A 78 VVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVM-ASKFDGIFLV-ATNP 125 (317)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHH-HTTCCSEEEE-CSSS
T ss_pred EEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHH-HhCCCcEEEE-ecCc
Confidence 99988655421210 00 1111333331 23 2389998876 3344
No 432
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=84.86 E-value=2.4 Score=38.04 Aligned_cols=90 Identities=22% Similarity=0.157 Sum_probs=55.1
Q ss_pred CCeEEEEecch--hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 106 PKTVFIMGGGE--GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 106 p~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
..+|.+||+|. +.++..+.+.....+|.++|.+++.++.+++. ... . ....|..+.+ +..|+|+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~~------~---~~~~~~~~~~----~~aDvVi 71 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER-GIV------D---EATADFKVFA----ALADVII 71 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT-TSC------S---EEESCTTTTG----GGCSEEE
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc-CCc------c---cccCCHHHhh----cCCCEEE
Confidence 35899999994 44455555432236899999999887766552 110 0 1223322222 3579999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccc-cCCCcEEE
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPK-LNDNGIFV 219 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~-L~~gGilv 219 (339)
+-.+... ..+.++. +... |+++.+++
T Consensus 72 lavp~~~---------~~~v~~~-l~~~~l~~~~ivi 98 (290)
T 3b1f_A 72 LAVPIKK---------TIDFIKI-LADLDLKEDVIIT 98 (290)
T ss_dssp ECSCHHH---------HHHHHHH-HHTSCCCTTCEEE
T ss_pred EcCCHHH---------HHHHHHH-HHhcCCCCCCEEE
Confidence 9886321 2577777 6777 88766655
No 433
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=84.79 E-value=12 Score=33.84 Aligned_cols=98 Identities=11% Similarity=0.200 Sum_probs=54.2
Q ss_pred cCeeeccccChhhHHHHHhhhhcccCCCCCeEEEEecchhH-HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhcccc
Q 019550 78 DGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGS-AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAF 156 (339)
Q Consensus 78 dG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~ 156 (339)
||.+....-|..-+.+.+.... .....++||++|+|+-+ .....+...+..+|+++..+++-.+...+.+...
T Consensus 100 ~g~l~G~NTD~~G~~~~L~~~~--~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~---- 173 (281)
T 3o8q_A 100 DGEILGDNTDGEGLVQDLLAQQ--VLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY---- 173 (281)
T ss_dssp TSCEEEECCHHHHHHHHHHHTT--CCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG----
T ss_pred CCcEEEEecHHHHHHHHHHHhC--CCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc----
Confidence 5666666666444455554221 12356899999986322 2222223356679999999986654433333321
Q ss_pred CCCCeEEEEccHHHHHHhcCCceeEEEecCCCC
Q 019550 157 CSKKLNLVVNDAKAELEKRNEKFDVIFGDLADP 189 (339)
Q Consensus 157 ~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~d~ 189 (339)
..++...-+ +....+|+||.-.+.+
T Consensus 174 --~~~~~~~~~------~l~~~aDiIInaTp~g 198 (281)
T 3o8q_A 174 --GEVKAQAFE------QLKQSYDVIINSTSAS 198 (281)
T ss_dssp --SCEEEEEGG------GCCSCEEEEEECSCCC
T ss_pred --CCeeEeeHH------HhcCCCCEEEEcCcCC
Confidence 134433211 1226799999877643
No 434
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=84.61 E-value=16 Score=32.72 Aligned_cols=77 Identities=17% Similarity=0.299 Sum_probs=46.0
Q ss_pred CCCeEEEEecchhHHHHHHHhcC--CCCEEEEEEcCHH-HHHHHHHhhhhhccccCCCCeEEEEccHHHH------HHh-
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK--SLEKVVMCDIDQE-VVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE------LEK- 174 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~-vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~------l~~- 174 (339)
+.+.||+.|+++ ++++++++.. ...+|.+++.+++ ..+...+..... ..++.++..|..+. ++.
T Consensus 46 ~gk~vlVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDS-GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-----GVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-----TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 356788888654 4444444321 2368999998865 334444333322 46788888887542 211
Q ss_pred --cCCceeEEEecCC
Q 019550 175 --RNEKFDVIFGDLA 187 (339)
Q Consensus 175 --~~~~yDvIi~D~~ 187 (339)
.-++.|++|.++.
T Consensus 120 ~~~~g~iD~lvnnAg 134 (291)
T 3ijr_A 120 VRQLGSLNILVNNVA 134 (291)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1257899999875
No 435
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=84.55 E-value=4 Score=37.98 Aligned_cols=93 Identities=17% Similarity=0.210 Sum_probs=55.9
Q ss_pred CCCeEEEEecc-hhHHHHHHHhcC-CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh-cC-Ccee
Q 019550 105 NPKTVFIMGGG-EGSAAREALKHK-SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-RN-EKFD 180 (339)
Q Consensus 105 ~p~~VL~IG~G-~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-~~-~~yD 180 (339)
..++||++|+| -|.++..+++.. + .+|++++.+++-.+.++++- .. ..++ .+ .+..+.++. +. ..+|
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~G-a~Vi~~~~~~~~~~~~~~lG-a~-~vi~-~~-----~~~~~~v~~~~~g~g~D 256 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTP-ATVIALDVKEEKLKLAERLG-AD-HVVD-AR-----RDPVKQVMELTRGRGVN 256 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCC-CEEEEEESSHHHHHHHHHTT-CS-EEEE-TT-----SCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHhC-CC-EEEe-cc-----chHHHHHHHHhCCCCCc
Confidence 45789999975 355566777766 6 58999999999889888652 11 0000 00 111233332 22 3799
Q ss_pred EEEecCCCCCCCCccccCCcHH--HHHHHHccccCCCcEEEEe
Q 019550 181 VIFGDLADPVEGGPCYQLYTKS--FYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~e--f~~~~~~~~L~~gGilv~~ 221 (339)
+|+-.... + + .++. +.+. ++|.++.-
T Consensus 257 vvid~~G~-----~-------~~~~~~~-~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 257 VAMDFVGS-----Q-------ATVDYTP-YLLG--RMGRLIIV 284 (359)
T ss_dssp EEEESSCC-----H-------HHHHHGG-GGEE--EEEEEEEC
T ss_pred EEEECCCC-----c-------hHHHHHH-Hhhc--CCCEEEEE
Confidence 99855431 1 2 4555 4444 89988764
No 436
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=84.41 E-value=2.8 Score=43.66 Aligned_cols=104 Identities=16% Similarity=0.225 Sum_probs=66.1
Q ss_pred CeEEEEecchhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhh-----------ccccCCCCeEEEEccHHHHHHhc
Q 019550 107 KTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVN-----------QEAFCSKKLNLVVNDAKAELEKR 175 (339)
Q Consensus 107 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~-----------~~~~~~~rv~v~~~D~~~~l~~~ 175 (339)
++|-+||+|.-+.+....-..-...|+.+|++++.++.++++.... .......++++ ..| .+-+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~-~~~l--- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSS-TKEL--- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE-ESC-GGGG---
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc-cCc-HHHH---
Confidence 6899999996544433322223578999999999999888765321 00001122222 222 2222
Q ss_pred CCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCC
Q 019550 176 NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGP 224 (339)
Q Consensus 176 ~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~ 224 (339)
...|+||=..+... -..++.|++ +.+.++|+-+|+.|+.+
T Consensus 392 -~~aDlVIEAV~E~l-------~iK~~vf~~-le~~~~~~aIlASNTSs 431 (742)
T 3zwc_A 392 -STVDLVVEAVFEDM-------NLKKKVFAE-LSALCKPGAFLCTNTSA 431 (742)
T ss_dssp -GSCSEEEECCCSCH-------HHHHHHHHH-HHHHSCTTCEEEECCSS
T ss_pred -hhCCEEEEeccccH-------HHHHHHHHH-HhhcCCCCceEEecCCc
Confidence 34799998777432 125688999 79999999999999754
No 437
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=84.25 E-value=3.9 Score=37.49 Aligned_cols=97 Identities=12% Similarity=0.275 Sum_probs=61.4
Q ss_pred CCCCeEEEEecch--hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 104 QNPKTVFIMGGGE--GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 104 ~~p~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
...++|-+||+|. ++++..++ .+ -+|+++|.+++.++.+++.+... . -.++++. .|..+ + ...|+
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la--aG-~~V~v~d~~~~~~~~~~~~l~~~--~--~~~i~~~-~~~~~-~----~~aDl 76 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA--SK-HEVVLQDVSEKALEAAREQIPEE--L--LSKIEFT-TTLEK-V----KDCDI 76 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH--TT-SEEEEECSCHHHHHHHHHHSCGG--G--GGGEEEE-SSCTT-G----GGCSE
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH--cC-CEEEEEECCHHHHHHHHHHHHHH--H--hCCeEEe-CCHHH-H----cCCCE
Confidence 3468999999994 44555555 34 58999999999999887763100 0 0244432 33322 2 35799
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
||...++... ....+|+. +... |+.+++.|+.
T Consensus 77 Vieavpe~~~-------vk~~l~~~-l~~~--~~~IlasntS 108 (293)
T 1zej_A 77 VMEAVFEDLN-------TKVEVLRE-VERL--TNAPLCSNTS 108 (293)
T ss_dssp EEECCCSCHH-------HHHHHHHH-HHTT--CCSCEEECCS
T ss_pred EEEcCcCCHH-------HHHHHHHH-HhcC--CCCEEEEECC
Confidence 9999885420 13467777 5554 8888887764
No 438
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=84.02 E-value=4 Score=34.96 Aligned_cols=93 Identities=23% Similarity=0.186 Sum_probs=55.1
Q ss_pred eEEEEecchh--HHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHH--HHHhc-CCceeEE
Q 019550 108 TVFIMGGGEG--SAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA--ELEKR-NEKFDVI 182 (339)
Q Consensus 108 ~VL~IG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~--~l~~~-~~~yDvI 182 (339)
+|+++|+|.= .+++.+.+ . ..+|+++|.|++.++..++. ..+.++.+|+.+ .++.. -+..|+|
T Consensus 2 ~iiIiG~G~~G~~la~~L~~-~-g~~v~vid~~~~~~~~l~~~----------~~~~~i~gd~~~~~~l~~a~i~~ad~v 69 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS-R-KYGVVIINKDRELCEEFAKK----------LKATIIHGDGSHKEILRDAEVSKNDVV 69 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH-T-TCCEEEEESCHHHHHHHHHH----------SSSEEEESCTTSHHHHHHHTCCTTCEE
T ss_pred EEEEECCCHHHHHHHHHHHh-C-CCeEEEEECCHHHHHHHHHH----------cCCeEEEcCCCCHHHHHhcCcccCCEE
Confidence 6899998632 23333333 3 35799999999987764432 235678888764 34432 3679999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
++-..+.. ....... ..+.+.+...+++..
T Consensus 70 i~~~~~d~---------~n~~~~~-~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 70 VILTPRDE---------VNLFIAQ-LVMKDFGVKRVVSLV 99 (218)
T ss_dssp EECCSCHH---------HHHHHHH-HHHHTSCCCEEEECC
T ss_pred EEecCCcH---------HHHHHHH-HHHHHcCCCeEEEEE
Confidence 98776432 1122333 334556666555543
No 439
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=83.98 E-value=8 Score=35.76 Aligned_cols=105 Identities=10% Similarity=0.087 Sum_probs=53.1
Q ss_pred EcCeeeccccChhhHHHHHhhhhcccCCCCCeEEEEecchhH-HHHHHHhcCCCCEEEEEEcC---HHHHHHHHHhhhhh
Q 019550 77 IDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGS-AAREALKHKSLEKVVMCDID---QEVVDFCRRFLTVN 152 (339)
Q Consensus 77 ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid---~~vi~~ar~~f~~~ 152 (339)
-||.+....-|..-+.+.|... ......++||++|+|+-+ .....+...+..+|+++..+ ++-.+...+.+...
T Consensus 121 ~~g~l~G~NTD~~Gf~~~L~~~--~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~ 198 (312)
T 3t4e_A 121 DDGYLRGYNTDGTGHIRAIKES--GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN 198 (312)
T ss_dssp ETTEEEEECHHHHHHHHHHHHT--TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH
T ss_pred cCCEEEEeCCcHHHHHHHHHhc--CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc
Confidence 4666666665644455555432 122356899999986432 22233334677799999998 44333322222211
Q ss_pred ccccCCCCeEEEEccHHHHHHhcCCceeEEEecCC
Q 019550 153 QEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLA 187 (339)
Q Consensus 153 ~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~ 187 (339)
. ...+..+.-+-.+.+...-..+|+||.-.+
T Consensus 199 ~----~~~v~~~~~~~l~~~~~~l~~~DiIINaTp 229 (312)
T 3t4e_A 199 T----DCVVTVTDLADQHAFTEALASADILTNGTK 229 (312)
T ss_dssp S----SCEEEEEETTCHHHHHHHHHHCSEEEECSS
T ss_pred c----CcceEEechHhhhhhHhhccCceEEEECCc
Confidence 0 122333332211112221235899987655
No 440
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=83.95 E-value=5.2 Score=38.44 Aligned_cols=159 Identities=11% Similarity=0.060 Sum_probs=89.7
Q ss_pred CeEEEEecchhHHHHHHHhcCC--CCE----EEEEEcCHHHHHHHHHhhhhhccc-----------c-CCCC--------
Q 019550 107 KTVFIMGGGEGSAAREALKHKS--LEK----VVMCDIDQEVVDFCRRFLTVNQEA-----------F-CSKK-------- 160 (339)
Q Consensus 107 ~~VL~IG~G~G~~~~~l~~~~~--~~~----v~~VEid~~vi~~ar~~f~~~~~~-----------~-~~~r-------- 160 (339)
-+||++.+|.|+....+.+. + ..- |.++|+|+..++.-+.+++..... + .+.+
T Consensus 11 lrvldLFsGiGG~~~Gl~~a-G~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~i 89 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNI-ARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYGI 89 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHH-HHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHHH
T ss_pred ceEEEEecCcCHHHHHHHHh-CCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhcccccccccccccc
Confidence 47999999999998877652 3 233 889999999999988887642100 0 0000
Q ss_pred -------eE-E---------EEccHHHHHHh-cCCceeEEEecCCC-CCC-C----C------ccccCCcHHHHHHHHcc
Q 019550 161 -------LN-L---------VVNDAKAELEK-RNEKFDVIFGDLAD-PVE-G----G------PCYQLYTKSFYERILKP 210 (339)
Q Consensus 161 -------v~-v---------~~~D~~~~l~~-~~~~yDvIi~D~~d-~~~-~----~------p~~~L~t~ef~~~~~~~ 210 (339)
++ + ..+|.++.-.. .++.+|+|+.-++- +.. . + +-..| -.++++. +..
T Consensus 90 ~~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip~~vDll~ggpPCQ~fS~ag~~~g~~d~~~~r~~L-~~~~~ri-i~~ 167 (403)
T 4dkj_A 90 KKINNTIKASYLNYAKKHFNNLFDIKKVNKDNFPKNIDIFTYSFPCQDLSVQGLQKGIDKELNTRSGL-LWEIERI-LEE 167 (403)
T ss_dssp HHHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSCSSCSEEEECCCCTTTCTTSCCCCCCGGGCCSGGG-HHHHHHH-HHH
T ss_pred ccccHHHHHHHHhhcccCCCcccchhhcCHhhCCCCCcEEEEeCCCCCHHHhCCCCCCCccccccchh-HHHHHHH-HHH
Confidence 00 0 23565543211 23457999998872 111 0 1 11122 2466665 543
Q ss_pred -------ccCCCcEEEEecCCCCccC--chhhHHHHHHHHHhHCCceEEEEEeecccC----CceeEEEEecC
Q 019550 211 -------KLNDNGIFVTQAGPAGIFT--HKEVFSSIYNTIKQVFKHVVAYTAHVPSFA----DTWGWVMASDQ 270 (339)
Q Consensus 211 -------~L~~gGilv~~~~~~~~~~--~~~~~~~i~~~l~~~F~~v~~~~~~iP~~~----~~~~~~~as~~ 270 (339)
.++|.-+++=|+. ++.. ....+..+.+.|.+..-.+......-..|| ..-.|++|.+.
T Consensus 168 ~~~k~~~~~~Pk~~l~ENV~--gl~~~~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~fiva~r~ 238 (403)
T 4dkj_A 168 IKNSFSKEEMPKYLLMENVK--NLLSHKNKKNYNTWLKQLEKFGYKSKTYLLNSKNFDNCQNRERVFCLSIRD 238 (403)
T ss_dssp HHHHSCGGGSCSEEEEEEEG--GGGSHHHHHHHHHHHHHHHHTTEEEEEEEEEGGGTTCSBCCEEEEEEEEEH
T ss_pred hhhhhccccCCCEEEEecch--hhhhhccchHHHHHHHHHHhCCCeEEEEEecHHHcCCCccceEEEEEEEcC
Confidence 2789777765652 1121 123567788888876555554444434453 22347788753
No 441
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=83.86 E-value=7.1 Score=38.02 Aligned_cols=74 Identities=19% Similarity=0.258 Sum_probs=51.4
Q ss_pred CCCCeEEEEecchhHH-HHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHH--HHHhcC-Cce
Q 019550 104 QNPKTVFIMGGGEGSA-AREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA--ELEKRN-EKF 179 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~-~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~--~l~~~~-~~y 179 (339)
...++|+++|+|.-+. ....+. ...+|..+|.|++-.+...+.+ ++..++++|+.+ .|.+.. +..
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~--~~~~v~iIE~d~~r~~~la~~l---------~~~~Vi~GD~td~~~L~ee~i~~~ 301 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLE--QTYSVKLIERNLQRAEKLSEEL---------ENTIVFCGDAADQELLTEENIDQV 301 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHT--TTSEEEEEESCHHHHHHHHHHC---------TTSEEEESCTTCHHHHHHTTGGGC
T ss_pred ccccEEEEEcchHHHHHHHHHhh--hcCceEEEecCHHHHHHHHHHC---------CCceEEeccccchhhHhhcCchhh
Confidence 3468999999884332 222333 2368999999998877655543 567899999976 455543 789
Q ss_pred eEEEecCCC
Q 019550 180 DVIFGDLAD 188 (339)
Q Consensus 180 DvIi~D~~d 188 (339)
|+++.-..+
T Consensus 302 D~~ia~T~~ 310 (461)
T 4g65_A 302 DVFIALTNE 310 (461)
T ss_dssp SEEEECCSC
T ss_pred cEEEEcccC
Confidence 999887653
No 442
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=83.38 E-value=2.4 Score=39.04 Aligned_cols=97 Identities=16% Similarity=0.174 Sum_probs=56.9
Q ss_pred CCCeEEEEecchhH--HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhh-hhhcccc-CCCCeEEEEccHHHHHHhcCCcee
Q 019550 105 NPKTVFIMGGGEGS--AAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEAF-CSKKLNLVVNDAKAELEKRNEKFD 180 (339)
Q Consensus 105 ~p~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f-~~~~~~~-~~~rv~v~~~D~~~~l~~~~~~yD 180 (339)
...+|++||+|.-+ ++..+++ . ..+|+++ .+++.++..++.- ....... ...+++. ..|.. . -+.+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~-~-G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~-~~~~~----~-~~~~D 88 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLAR-A-GHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSA-SSDPS----A-VQGAD 88 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHH-T-TCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEE-ESCGG----G-GTTCS
T ss_pred cCCcEEEECcCHHHHHHHHHHHH-C-CCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeee-eCCHH----H-cCCCC
Confidence 46789999999433 4444444 3 3589999 9998888776541 1110000 0011221 23321 1 25699
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
+||+-.+.. ...+.++. ++..|+++.+++.
T Consensus 89 ~vilavk~~---------~~~~~l~~-l~~~l~~~~~iv~ 118 (318)
T 3hwr_A 89 LVLFCVKST---------DTQSAALA-MKPALAKSALVLS 118 (318)
T ss_dssp EEEECCCGG---------GHHHHHHH-HTTTSCTTCEEEE
T ss_pred EEEEEcccc---------cHHHHHHH-HHHhcCCCCEEEE
Confidence 999987632 24688888 7889998876654
No 443
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=83.36 E-value=1.2 Score=41.37 Aligned_cols=46 Identities=24% Similarity=0.207 Sum_probs=38.8
Q ss_pred CCCCeEEEEecchhHHHHHHHhcCCCCEEEEEEcCH---HHHHHHHHhhhh
Q 019550 104 QNPKTVFIMGGGEGSAAREALKHKSLEKVVMCDIDQ---EVVDFCRRFLTV 151 (339)
Q Consensus 104 ~~p~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~---~vi~~ar~~f~~ 151 (339)
.+...|||--||+|+++.++.+. ..+..++|+++ ..++++++.+..
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC--
T ss_pred CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHHH
Confidence 45668999999999999988875 37899999999 999999998754
No 444
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=83.35 E-value=2.6 Score=41.46 Aligned_cols=102 Identities=19% Similarity=0.268 Sum_probs=63.3
Q ss_pred CCeEEEEecch--hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhc-cccCC------------CCeEEEEccHHH
Q 019550 106 PKTVFIMGGGE--GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQ-EAFCS------------KKLNLVVNDAKA 170 (339)
Q Consensus 106 p~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~-~~~~~------------~rv~v~~~D~~~ 170 (339)
.++|.+||+|. ++++..+++ .+ .+|+++|++++.++.+++.....- ..... .+++.. .|. +
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~-aG-~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~-~ 80 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAAS-HG-HQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDI-H 80 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-TT-CCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCG-G
T ss_pred CCEEEEECcCHHHHHHHHHHHH-CC-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCH-H
Confidence 45799999994 445555555 34 579999999999998876542110 00001 133332 332 1
Q ss_pred HHHhcCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 171 ELEKRNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 171 ~l~~~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
-+ +..|+||.-.++.. -..++.|+. +.+.++++.+++.|+.
T Consensus 81 ~~----~~aDlVIeAVpe~~-------~vk~~v~~~-l~~~~~~~~IlasntS 121 (483)
T 3mog_A 81 AL----AAADLVIEAASERL-------EVKKALFAQ-LAEVCPPQTLLTTNTS 121 (483)
T ss_dssp GG----GGCSEEEECCCCCH-------HHHHHHHHH-HHHHSCTTCEEEECCS
T ss_pred Hh----cCCCEEEEcCCCcH-------HHHHHHHHH-HHHhhccCcEEEecCC
Confidence 12 35799999887431 023577888 6788898888877653
No 445
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=83.17 E-value=5.6 Score=34.92 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=49.1
Q ss_pred CCCeEEEEecchhH---HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH---------H
Q 019550 105 NPKTVFIMGGGEGS---AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE---------L 172 (339)
Q Consensus 105 ~p~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~---------l 172 (339)
..+.||+.|+++|. +++.+++ . ..+|.+++.+++-++...+.+... ..++.++..|..+. +
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~-~-G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAA-E-GFTVFAGRRNGEKLAPLVAEIEAA-----GGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHH-T-TCEEEEEESSGGGGHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECcCCCHHHHHHHHHHH
Confidence 45778888876542 3344444 3 368999999987766555544332 36788888886432 2
Q ss_pred HhcCCceeEEEecCC
Q 019550 173 EKRNEKFDVIFGDLA 187 (339)
Q Consensus 173 ~~~~~~yDvIi~D~~ 187 (339)
... ++.|++|.++.
T Consensus 79 ~~~-g~id~lv~nAg 92 (252)
T 3h7a_A 79 DAH-APLEVTIFNVG 92 (252)
T ss_dssp HHH-SCEEEEEECCC
T ss_pred Hhh-CCceEEEECCC
Confidence 223 67999999886
No 446
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=83.03 E-value=12 Score=33.78 Aligned_cols=89 Identities=10% Similarity=0.153 Sum_probs=51.4
Q ss_pred CCCeEEEEecchh-HHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEE-ccHHHHHHhcCCceeEE
Q 019550 105 NPKTVFIMGGGEG-SAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVV-NDAKAELEKRNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~G-~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~-~D~~~~l~~~~~~yDvI 182 (339)
..++|++||+|.= ......++..+ .+|++++.+++-.+.++++ . ++.+. .+..+ .-...|+|
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~dr~~~~~~~~~~~-g----------~~~~~~~~l~~----~l~~aDvV 217 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALG-AKVKVGARESDLLARIAEM-G----------MEPFHISKAAQ----ELRDVDVC 217 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-T----------SEEEEGGGHHH----HTTTCSEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHC-C----------CeecChhhHHH----HhcCCCEE
Confidence 4689999998742 22233334455 4899999998765444332 1 12221 23222 23568999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
+.-.+. .+...+.++ .++++++++ |.+
T Consensus 218 i~~~p~--------~~i~~~~l~-----~mk~~~~li-n~a 244 (293)
T 3d4o_A 218 INTIPA--------LVVTANVLA-----EMPSHTFVI-DLA 244 (293)
T ss_dssp EECCSS--------CCBCHHHHH-----HSCTTCEEE-ECS
T ss_pred EECCCh--------HHhCHHHHH-----hcCCCCEEE-Eec
Confidence 998753 234444333 467877765 653
No 447
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=82.86 E-value=10 Score=30.01 Aligned_cols=66 Identities=18% Similarity=0.304 Sum_probs=40.1
Q ss_pred CCeEEEEecchhHHHHHHHh---cCCCCEEEEEEcCHHHHHH-HHHhhhhhccccCCCCeEE-EEccHHHHHHhcCCcee
Q 019550 106 PKTVFIMGGGEGSAAREALK---HKSLEKVVMCDIDQEVVDF-CRRFLTVNQEAFCSKKLNL-VVNDAKAELEKRNEKFD 180 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~---~~~~~~v~~VEid~~vi~~-ar~~f~~~~~~~~~~rv~v-~~~D~~~~l~~~~~~yD 180 (339)
.++|++||+| .+++.+++ ..+ .+|++++.+++-.+. ++++ . ..+ ...|..+.+. ..|
T Consensus 21 ~~~v~iiG~G--~iG~~~a~~l~~~g-~~v~v~~r~~~~~~~~a~~~-~----------~~~~~~~~~~~~~~----~~D 82 (144)
T 3oj0_A 21 GNKILLVGNG--MLASEIAPYFSYPQ-YKVTVAGRNIDHVRAFAEKY-E----------YEYVLINDIDSLIK----NND 82 (144)
T ss_dssp CCEEEEECCS--HHHHHHGGGCCTTT-CEEEEEESCHHHHHHHHHHH-T----------CEEEECSCHHHHHH----TCS
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCC-CEEEEEcCCHHHHHHHHHHh-C----------CceEeecCHHHHhc----CCC
Confidence 6799999985 34444433 234 349999999887654 3332 2 122 2345444443 489
Q ss_pred EEEecCCCC
Q 019550 181 VIFGDLADP 189 (339)
Q Consensus 181 vIi~D~~d~ 189 (339)
+|+.-.+.+
T Consensus 83 ivi~at~~~ 91 (144)
T 3oj0_A 83 VIITATSSK 91 (144)
T ss_dssp EEEECSCCS
T ss_pred EEEEeCCCC
Confidence 999877644
No 448
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=82.67 E-value=11 Score=34.73 Aligned_cols=105 Identities=13% Similarity=0.083 Sum_probs=52.2
Q ss_pred EcCeeeccccChhhHHHHHhhhhcccCCCCCeEEEEecchh-HHHHHHHhcCCCCEEEEEEcC---HHHHHHHHHhhhhh
Q 019550 77 IDGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEG-SAAREALKHKSLEKVVMCDID---QEVVDFCRRFLTVN 152 (339)
Q Consensus 77 ldG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~VL~IG~G~G-~~~~~l~~~~~~~~v~~VEid---~~vi~~ar~~f~~~ 152 (339)
-||.+....-|..-+.+.|.... .....++||++|+|+- ......+...+..+|+++..+ ++-.+...+.+...
T Consensus 127 ~~g~l~G~NTD~~Gf~~~L~~~~--~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~ 204 (315)
T 3tnl_A 127 DDGVLTGHITDGTGYMRALKEAG--HDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK 204 (315)
T ss_dssp ETTEEEEECCHHHHHHHHHHHTT--CCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH
T ss_pred cCCEEEEeCCCHHHHHHHHHHcC--CCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh
Confidence 35666555555444455554321 1235689999998632 222222333566799999998 44333322222211
Q ss_pred ccccCCCCeEEEEccHHHHHHhcCCceeEEEecCC
Q 019550 153 QEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGDLA 187 (339)
Q Consensus 153 ~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D~~ 187 (339)
. .-+++++.-+-.+-+...-..+|+||.-.+
T Consensus 205 ~----~~~~~~~~~~~~~~l~~~l~~aDiIINaTp 235 (315)
T 3tnl_A 205 T----DCKAQLFDIEDHEQLRKEIAESVIFTNATG 235 (315)
T ss_dssp S----SCEEEEEETTCHHHHHHHHHTCSEEEECSS
T ss_pred c----CCceEEeccchHHHHHhhhcCCCEEEECcc
Confidence 0 122444322111112222245899987665
No 449
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=82.64 E-value=18 Score=31.41 Aligned_cols=78 Identities=12% Similarity=0.185 Sum_probs=47.6
Q ss_pred CCCeEEEEecchhHHHHHHHhcC--CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccH--H------HHHH-
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK--SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDA--K------AELE- 173 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~--~------~~l~- 173 (339)
+.+.||+.|+++ ++++++++.. ...+|.+++.+++-++...+.+.... ..++.++..|. . +.++
T Consensus 11 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 11 NDRIILVTGASD-GIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET----GRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH----SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc----CCCceEEEEecccCCHHHHHHHHHH
Confidence 356788888654 4444433321 23689999999887766555543321 24677777776 2 1121
Q ss_pred --hcCCceeEEEecCC
Q 019550 174 --KRNEKFDVIFGDLA 187 (339)
Q Consensus 174 --~~~~~yDvIi~D~~ 187 (339)
..-++.|++|.++.
T Consensus 86 ~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHCSCCSEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 22357999999885
No 450
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=82.53 E-value=1.9 Score=43.80 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=24.8
Q ss_pred CCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCH
Q 019550 106 PKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQ 139 (339)
Q Consensus 106 p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 139 (339)
..+||+||+|+ |+.....+...++.+++.||-|.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 57899999984 33333333347899999999985
No 451
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=82.48 E-value=3.1 Score=37.16 Aligned_cols=77 Identities=13% Similarity=0.147 Sum_probs=48.4
Q ss_pred CCCeEEEEecchhH---HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH---H----H-
Q 019550 105 NPKTVFIMGGGEGS---AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE---L----E- 173 (339)
Q Consensus 105 ~p~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~---l----~- 173 (339)
..+.||+.|+++|. +++.+++ . ..+|.++..++.-.+.+.+.+... ...++.++..|..+. + +
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~-~-G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~~v~~~~~~ 84 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSS-N-GIMVVLTCRDVTKGHEAVEKLKNS----NHENVVFHQLDVTDPIATMSSLADF 84 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHH-T-TCEEEEEESCHHHHHHHHHHHHTT----TCCSEEEEECCTTSCHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEccCCCcHHHHHHHHHH
Confidence 45678888876442 3344444 3 368999999987766555544322 135788888887543 1 1
Q ss_pred --hcCCceeEEEecCC
Q 019550 174 --KRNEKFDVIFGDLA 187 (339)
Q Consensus 174 --~~~~~yDvIi~D~~ 187 (339)
..-++.|++|.++.
T Consensus 85 ~~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 85 IKTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHHSSCCEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 11257999999885
No 452
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=82.29 E-value=14 Score=34.35 Aligned_cols=80 Identities=16% Similarity=0.162 Sum_probs=44.4
Q ss_pred CCCeEEEEecch-hH-HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 105 NPKTVFIMGGGE-GS-AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~-G~-~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
++.+|.+||+|. |. ++..++...-..+++.+|++++.++....-+... ..+-..++++..+|.. - -+..|+|
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~-a----~~~aDvV 77 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYE-D----CKDADIV 77 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGG-G----GTTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHH-H----hCCCCEE
Confidence 467899999874 22 3333333222358999999988665422111110 0011245666666632 1 2457999
Q ss_pred EecCCCCC
Q 019550 183 FGDLADPV 190 (339)
Q Consensus 183 i~D~~d~~ 190 (339)
|+-...|.
T Consensus 78 vi~ag~p~ 85 (326)
T 3pqe_A 78 CICAGANQ 85 (326)
T ss_dssp EECCSCCC
T ss_pred EEecccCC
Confidence 99876554
No 453
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=82.03 E-value=5.3 Score=34.55 Aligned_cols=93 Identities=19% Similarity=0.182 Sum_probs=55.7
Q ss_pred CCeEEEEecchhHHHHHHHhcCC--CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHH--HHHHhc-CCcee
Q 019550 106 PKTVFIMGGGEGSAAREALKHKS--LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAK--AELEKR-NEKFD 180 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~l~~~~~--~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~--~~l~~~-~~~yD 180 (339)
.++|+++|+| .++..+++... .. |+++|.|++.++.++ ..+.++.+|+. +.|+.. -+..|
T Consensus 9 ~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~------------~~~~~i~gd~~~~~~l~~a~i~~ad 73 (234)
T 2aef_A 9 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR------------SGANFVHGDPTRVSDLEKANVRGAR 73 (234)
T ss_dssp -CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH------------TTCEEEESCTTCHHHHHHTTCTTCS
T ss_pred CCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh------------cCCeEEEcCCCCHHHHHhcCcchhc
Confidence 4689999986 44444443221 24 999999998766544 13678888876 345443 36799
Q ss_pred EEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 181 VIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 181 vIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
+|++-..+.. . . ..... ..+.+.++..+++...
T Consensus 74 ~vi~~~~~d~-----~---n-~~~~~-~a~~~~~~~~iia~~~ 106 (234)
T 2aef_A 74 AVIVDLESDS-----E---T-IHCIL-GIRKIDESVRIIAEAE 106 (234)
T ss_dssp EEEECCSCHH-----H---H-HHHHH-HHHHHCSSSEEEEECS
T ss_pred EEEEcCCCcH-----H---H-HHHHH-HHHHHCCCCeEEEEEC
Confidence 9998765321 0 1 11222 3456778766666543
No 454
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=81.90 E-value=8.6 Score=33.21 Aligned_cols=76 Identities=17% Similarity=0.168 Sum_probs=49.2
Q ss_pred CCCeEEEEecchhH---HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH------HH--
Q 019550 105 NPKTVFIMGGGEGS---AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE------LE-- 173 (339)
Q Consensus 105 ~p~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~------l~-- 173 (339)
+.+.||+.|+++|. +++.+++ . ..+|.+++.+++-.+...+.+... ..++.++..|..+. ++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-~-G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALAS-K-GATVVGTATSQASAEKFENSMKEK-----GFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHH-T-TCEEEEEESSHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHH
Confidence 35678888866442 3444444 3 368999999988776655544332 36788888886532 22
Q ss_pred -hcCCceeEEEecCC
Q 019550 174 -KRNEKFDVIFGDLA 187 (339)
Q Consensus 174 -~~~~~yDvIi~D~~ 187 (339)
...++.|++|.++.
T Consensus 77 ~~~~~~id~li~~Ag 91 (247)
T 3lyl_A 77 KAENLAIDILVNNAG 91 (247)
T ss_dssp HHTTCCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 22357899999885
No 455
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=81.80 E-value=13 Score=31.95 Aligned_cols=78 Identities=6% Similarity=0.087 Sum_probs=47.5
Q ss_pred CCCeEEEEecchhHHHHHHHhcC--CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccH--H------HHHHh
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK--SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDA--K------AELEK 174 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~--~------~~l~~ 174 (339)
+.+.||+.|++ |+++++++++. ...+|.+++.+++-++...+.+.... .+++.++..|. . +.++.
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG----QPQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC----CCCceEEEeccccCCHHHHHHHHHH
Confidence 35678888865 44444444321 23689999999887776665554321 35667776665 1 22221
Q ss_pred ---cCCceeEEEecCC
Q 019550 175 ---RNEKFDVIFGDLA 187 (339)
Q Consensus 175 ---~~~~yDvIi~D~~ 187 (339)
.-++.|++|.++.
T Consensus 88 ~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNAS 103 (247)
T ss_dssp HHHHHSCCSEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 1257999999885
No 456
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=81.70 E-value=18 Score=33.09 Aligned_cols=111 Identities=16% Similarity=0.199 Sum_probs=58.4
Q ss_pred CCCeEEEEecch--hHHHHHHHhcCCCCEEEEEEcCHHHHHH-HHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 105 NPKTVFIMGGGE--GSAAREALKHKSLEKVVMCDIDQEVVDF-CRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~-ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
.+.+|.+||+|. ++++..++......+|..+|++++..+. +.+..... .+....+++..+|. +- -+..|+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~--~~~~~~~~i~~~~~-~a----l~~aDv 77 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGK--VFAPKPVDIWHGDY-DD----CRDADL 77 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHT--TSSSSCCEEEECCG-GG----TTTCSE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHh--hhcCCCeEEEcCcH-HH----hCCCCE
Confidence 457899999983 3344444443334689999999875553 22221111 11123566665442 21 245899
Q ss_pred EEecCCCCCCCCcc-ccCC------cHHHHHHHHccccCCCcEEEEecCCC
Q 019550 182 IFGDLADPVEGGPC-YQLY------TKSFYERILKPKLNDNGIFVTQAGPA 225 (339)
Q Consensus 182 Ii~D~~d~~~~~p~-~~L~------t~ef~~~~~~~~L~~gGilv~~~~~~ 225 (339)
||+-..-+...+.. ..+. -.+..+. +.+ ..|++++++ .+.|
T Consensus 78 Viia~~~~~~~g~~r~dl~~~n~~i~~~i~~~-i~~-~~p~a~~iv-~tNP 125 (316)
T 1ldn_A 78 VVICAGANQKPGETRLDLVDKNIAIFRSIVES-VMA-SGFQGLFLV-ATNP 125 (316)
T ss_dssp EEECCSCCCCTTTCSGGGHHHHHHHHHHHHHH-HHH-HTCCSEEEE-CSSS
T ss_pred EEEcCCCCCCCCCCHHHHHHcChHHHHHHHHH-HHH-HCCCCEEEE-eCCc
Confidence 99987654321210 0111 1234444 333 368998765 3444
No 457
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.43 E-value=5.5 Score=34.64 Aligned_cols=76 Identities=18% Similarity=0.249 Sum_probs=48.9
Q ss_pred CCCeEEEEecchhH---HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH------HHh-
Q 019550 105 NPKTVFIMGGGEGS---AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE------LEK- 174 (339)
Q Consensus 105 ~p~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~------l~~- 174 (339)
+.+.||+.|+++|. +++.+++ . ..+|.+++.+++-.+...+.+... .+++.++..|..+. ++.
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~-~-G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAR-E-GAAVVVADINAEAAEAVAKQIVAD-----GGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-T-TCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 45778888865442 3344444 3 368999999988776655554332 46788888887542 111
Q ss_pred --cCCceeEEEecCC
Q 019550 175 --RNEKFDVIFGDLA 187 (339)
Q Consensus 175 --~~~~yDvIi~D~~ 187 (339)
.-++.|++|.++.
T Consensus 81 ~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1247999999875
No 458
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=80.86 E-value=12 Score=34.13 Aligned_cols=72 Identities=22% Similarity=0.332 Sum_probs=42.0
Q ss_pred CCCeEEEEecchhH--HHHHHHhcCCCCEE-EEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 105 NPKTVFIMGGGEGS--AAREALKHKSLEKV-VMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~G~--~~~~l~~~~~~~~v-~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
++.+|.+||+|.-+ .+..+.+..+..++ .++|.+++-.+...+.++. + ....|..+.+.. ...|+
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~-------~---~~~~~~~~~l~~--~~~D~ 74 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGV-------E---TTYTNYKDMIDT--ENIDA 74 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCC-------S---EEESCHHHHHTT--SCCSE
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCC-------C---cccCCHHHHhcC--CCCCE
Confidence 45689999998422 33444412334555 4679999876544332221 1 134566665542 46899
Q ss_pred EEecCCC
Q 019550 182 IFGDLAD 188 (339)
Q Consensus 182 Ii~D~~d 188 (339)
|++-.++
T Consensus 75 V~i~tp~ 81 (346)
T 3cea_A 75 IFIVAPT 81 (346)
T ss_dssp EEECSCG
T ss_pred EEEeCCh
Confidence 9987663
No 459
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=80.82 E-value=14 Score=35.43 Aligned_cols=105 Identities=16% Similarity=0.191 Sum_probs=58.8
Q ss_pred eEEEEecch--hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhh-hhhcccc--------CCCCeEEEEccHHHHHHhcC
Q 019550 108 TVFIMGGGE--GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEAF--------CSKKLNLVVNDAKAELEKRN 176 (339)
Q Consensus 108 ~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f-~~~~~~~--------~~~rv~v~~~D~~~~l~~~~ 176 (339)
+|.+||+|. +.++..+++ .+ .+|+++|++++.++..++.- +.....+ ...+++. ..|..+.++
T Consensus 2 kI~VIG~G~vG~~~A~~la~-~G-~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~~--- 75 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSA-RG-HEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKAVL--- 75 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHH-TT-CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHH---
T ss_pred EEEEECCCHHHHHHHHHHHH-CC-CEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHHhc---
Confidence 689999984 334454554 33 57999999999888766521 1100000 0123433 345443343
Q ss_pred CceeEEEecCCCCCC-CCccccCCcHHHHHHHHccccCC---CcEEEE
Q 019550 177 EKFDVIFGDLADPVE-GGPCYQLYTKSFYERILKPKLND---NGIFVT 220 (339)
Q Consensus 177 ~~yDvIi~D~~d~~~-~~p~~~L~t~ef~~~~~~~~L~~---gGilv~ 220 (339)
..|+|++-.+.|.. .+.+.--+..+..+. +...|++ +.+++.
T Consensus 76 -~aDvviiaVptp~~~~~~~dl~~v~~v~~~-i~~~l~~~~~~~iVV~ 121 (436)
T 1mv8_A 76 -DSDVSFICVGTPSKKNGDLDLGYIETVCRE-IGFAIREKSERHTVVV 121 (436)
T ss_dssp -TCSEEEECCCCCBCTTSSBCCHHHHHHHHH-HHHHHTTCCSCCEEEE
T ss_pred -cCCEEEEEcCCCcccCCCcchHHHHHHHHH-HHHHhcccCCCcEEEE
Confidence 47999998876542 111111123566676 5778888 555554
No 460
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=80.54 E-value=12 Score=33.96 Aligned_cols=89 Identities=8% Similarity=0.167 Sum_probs=51.6
Q ss_pred CCCeEEEEecchhH-HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEE-ccHHHHHHhcCCceeEE
Q 019550 105 NPKTVFIMGGGEGS-AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVV-NDAKAELEKRNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~-~D~~~~l~~~~~~yDvI 182 (339)
..++|++||+|.=+ .....++..+ .+|+++|.+++-.+.++++ .++.+. .+ +...-+..|+|
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d~~~~~~~~~~~~-----------g~~~~~~~~----l~~~l~~aDvV 219 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALG-ANVKVGARSSAHLARITEM-----------GLVPFHTDE----LKEHVKDIDIC 219 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-----------TCEEEEGGG----HHHHSTTCSEE
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHC-----------CCeEEchhh----HHHHhhCCCEE
Confidence 57899999987422 2223333455 5899999998755444331 122221 23 22223568999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
+.-.+. .+.+.+. .+.++++++++ +.+
T Consensus 220 i~~~p~--------~~i~~~~-----~~~mk~g~~li-n~a 246 (300)
T 2rir_A 220 INTIPS--------MILNQTV-----LSSMTPKTLIL-DLA 246 (300)
T ss_dssp EECCSS--------CCBCHHH-----HTTSCTTCEEE-ECS
T ss_pred EECCCh--------hhhCHHH-----HHhCCCCCEEE-EEe
Confidence 998774 2334432 24688887765 653
No 461
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=80.42 E-value=3.4 Score=37.69 Aligned_cols=101 Identities=14% Similarity=0.120 Sum_probs=52.9
Q ss_pred cCeeeccccChhhHHHHHhhhhcccCCCCCeEEEEecchhH-HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhcccc
Q 019550 78 DGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGS-AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAF 156 (339)
Q Consensus 78 dG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~ 156 (339)
||.+....-|..-+.+.+... ......++||++|+|+-+ .....+...+..+|+++..+++-.+...+.+....
T Consensus 101 ~g~l~G~NTD~~G~~~~l~~~--~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~--- 175 (283)
T 3jyo_A 101 TGHTTGHNTDVSGFGRGMEEG--LPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV--- 175 (283)
T ss_dssp TSCEEEECHHHHHHHHHHHHH--CTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHH---
T ss_pred CCeEEEecCCHHHHHHHHHHh--CcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhc---
Confidence 556655555544444444321 112356899999986322 22222233566789999999876654333333211
Q ss_pred CCCCeEEEE-ccHHHHHHhcCCceeEEEecCC
Q 019550 157 CSKKLNLVV-NDAKAELEKRNEKFDVIFGDLA 187 (339)
Q Consensus 157 ~~~rv~v~~-~D~~~~l~~~~~~yDvIi~D~~ 187 (339)
..-++.... .+..+.+ ..+|+||.-.+
T Consensus 176 ~~~~i~~~~~~~l~~~l----~~~DiVInaTp 203 (283)
T 3jyo_A 176 GREAVVGVDARGIEDVI----AAADGVVNATP 203 (283)
T ss_dssp TSCCEEEECSTTHHHHH----HHSSEEEECSS
T ss_pred CCceEEEcCHHHHHHHH----hcCCEEEECCC
Confidence 012333322 2333333 35899987665
No 462
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=80.39 E-value=3 Score=38.27 Aligned_cols=94 Identities=12% Similarity=0.048 Sum_probs=54.0
Q ss_pred CeEEEEecchhH--HHHHHHhcCCCCEEEEEEcCHHHHHHHHHh-hhhhccccCCCCeEE----EEccHHHHHHhcCCce
Q 019550 107 KTVFIMGGGEGS--AAREALKHKSLEKVVMCDIDQEVVDFCRRF-LTVNQEAFCSKKLNL----VVNDAKAELEKRNEKF 179 (339)
Q Consensus 107 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ar~~-f~~~~~~~~~~rv~v----~~~D~~~~l~~~~~~y 179 (339)
.+|++||+|.-+ ++..+++ . ..+|++++.++. +..++. +..... ..+.+++ ...|. ....+.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~-~-g~~V~~~~r~~~--~~i~~~Gl~~~~~--~~g~~~~~~~~~~~~~----~~~~~~~ 72 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAK-T-GHCVSVVSRSDY--ETVKAKGIRIRSA--TLGDYTFRPAAVVRSA----AELETKP 72 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHH-T-TCEEEEECSTTH--HHHHHHCEEEEET--TTCCEEECCSCEESCG----GGCSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHh-C-CCeEEEEeCChH--HHHHhCCcEEeec--CCCcEEEeeeeeECCH----HHcCCCC
Confidence 479999999433 4444444 3 368999999872 444443 111110 0223332 12332 2223479
Q ss_pred eEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 180 DVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
|+||+-..... ..+.++. ++..|+++.+++.
T Consensus 73 DlVilavK~~~---------~~~~l~~-l~~~l~~~t~Iv~ 103 (320)
T 3i83_A 73 DCTLLCIKVVE---------GADRVGL-LRDAVAPDTGIVL 103 (320)
T ss_dssp SEEEECCCCCT---------TCCHHHH-HTTSCCTTCEEEE
T ss_pred CEEEEecCCCC---------hHHHHHH-HHhhcCCCCEEEE
Confidence 99999876432 2356787 7889998886553
No 463
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=80.30 E-value=25 Score=32.61 Aligned_cols=110 Identities=18% Similarity=0.232 Sum_probs=56.3
Q ss_pred CCCCCeEEEEecch-hH-HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCcee
Q 019550 103 HQNPKTVFIMGGGE-GS-AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFD 180 (339)
Q Consensus 103 ~~~p~~VL~IG~G~-G~-~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yD 180 (339)
...+.+|.+||+|. |. ++..++...-..++..+|++++.++.-..-+.... .+ .+++++..+|-.. -+..|
T Consensus 6 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~-~~-~~~~~i~~~~~~a-----~~~aD 78 (326)
T 3vku_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL-PF-TSPKKIYSAEYSD-----AKDAD 78 (326)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GG-SCCCEEEECCGGG-----GTTCS
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh-hh-cCCcEEEECcHHH-----hcCCC
Confidence 35678999999873 22 33333333223589999999886654332222111 11 1456777665321 24579
Q ss_pred EEEecCCCCCCCCc-cccCC--c----HHHHHHHHccccCCCcEEEEe
Q 019550 181 VIFGDLADPVEGGP-CYQLY--T----KSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 181 vIi~D~~d~~~~~p-~~~L~--t----~ef~~~~~~~~L~~gGilv~~ 221 (339)
+||+-...|...+. -..|+ + .+.-+. +. ...|++++++-
T Consensus 79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~-i~-~~~p~a~ilvv 124 (326)
T 3vku_A 79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDP-IV-DSGFNGIFLVA 124 (326)
T ss_dssp EEEECCCCC----------------CHHHHHHH-HH-TTTCCSEEEEC
T ss_pred EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHH-HH-hcCCceEEEEc
Confidence 99987654431111 11222 1 244444 33 35799987653
No 464
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=80.18 E-value=14 Score=33.95 Aligned_cols=104 Identities=21% Similarity=0.252 Sum_probs=54.7
Q ss_pred eEEEEecchhHH--HHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEec
Q 019550 108 TVFIMGGGEGSA--AREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGD 185 (339)
Q Consensus 108 ~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D 185 (339)
+|.+||+|.=+. +..+++.....+|+++|++++.++.....+..... + ....++...| .+-+ +..|+||+-
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~-~~~~~i~~~d-~~~~----~~aDvViia 74 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP-F-TRRANIYAGD-YADL----KGSDVVIVA 74 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-G-SCCCEEEECC-GGGG----TTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh-h-cCCcEEEeCC-HHHh----CCCCEEEEc
Confidence 689999985433 33333322134899999999877654432221100 1 1233444455 2222 468999998
Q ss_pred CCCCCCCCcc-ccCC------cHHHHHHHHccccCCCcEEEE
Q 019550 186 LADPVEGGPC-YQLY------TKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 186 ~~d~~~~~p~-~~L~------t~ef~~~~~~~~L~~gGilv~ 220 (339)
...+...+.. ..|. -.+..+. +.+. .|++++++
T Consensus 75 v~~~~~~g~~r~dl~~~n~~i~~~i~~~-i~~~-~~~~~ii~ 114 (319)
T 1a5z_A 75 AGVPQKPGETRLQLLGRNARVMKEIARN-VSKY-APDSIVIV 114 (319)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHH-HHHH-CTTCEEEE
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHhh-CCCeEEEE
Confidence 8765411100 0000 1355555 4444 68897765
No 465
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=80.07 E-value=4.1 Score=35.52 Aligned_cols=77 Identities=12% Similarity=0.082 Sum_probs=47.5
Q ss_pred CCCeEEEEecchhHHHHHHHhcC---CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH------HHh-
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK---SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE------LEK- 174 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~---~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~------l~~- 174 (339)
+.++||+.|+ +|+++++++++. ...+|++++.++.-.+...+.+... ..+++++..|..+. ++.
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-----GLSPRFHQLDIDDLQSIRALRDFL 76 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc-----CCeeEEEECCCCCHHHHHHHHHHH
Confidence 3567888775 455665555421 2368999999987655544443321 35788888886542 111
Q ss_pred --cCCceeEEEecCC
Q 019550 175 --RNEKFDVIFGDLA 187 (339)
Q Consensus 175 --~~~~yDvIi~D~~ 187 (339)
.-++.|+||..+.
T Consensus 77 ~~~~g~id~li~~Ag 91 (276)
T 1wma_A 77 RKEYGGLDVLVNNAG 91 (276)
T ss_dssp HHHHSSEEEEEECCC
T ss_pred HHhcCCCCEEEECCc
Confidence 1147999999875
No 466
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=79.78 E-value=36 Score=30.97 Aligned_cols=87 Identities=18% Similarity=0.290 Sum_probs=53.8
Q ss_pred CeEEEEecch--hHHHHHHHhcCCC---CEEEEEEcCHH--HHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCce
Q 019550 107 KTVFIMGGGE--GSAAREALKHKSL---EKVVMCDIDQE--VVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKF 179 (339)
Q Consensus 107 ~~VL~IG~G~--G~~~~~l~~~~~~---~~v~~VEid~~--vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~y 179 (339)
.+|.+||+|. +.++..+++ .+. .+|++++.+++ .++..+++ .+++ ..|..+.++ ..
T Consensus 23 mkI~iIG~G~mG~ala~~L~~-~G~~~~~~V~v~~r~~~~~~~~~l~~~-----------G~~~-~~~~~e~~~----~a 85 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTA-AGVLAAHKIMASSPDMDLATVSALRKM-----------GVKL-TPHNKETVQ----HS 85 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHH-TTSSCGGGEEEECSCTTSHHHHHHHHH-----------TCEE-ESCHHHHHH----HC
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCCCcceEEEECCCccHHHHHHHHHc-----------CCEE-eCChHHHhc----cC
Confidence 4799999994 445555555 331 57999999974 44444432 1222 234444443 47
Q ss_pred eEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 180 DVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 180 DvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
|+||+-.++. ...+.++. +...|+++.+++-
T Consensus 86 DvVilav~~~---------~~~~vl~~-l~~~l~~~~ivvs 116 (322)
T 2izz_A 86 DVLFLAVKPH---------IIPFILDE-IGADIEDRHIVVS 116 (322)
T ss_dssp SEEEECSCGG---------GHHHHHHH-HGGGCCTTCEEEE
T ss_pred CEEEEEeCHH---------HHHHHHHH-HHhhcCCCCEEEE
Confidence 9999988722 24577777 6778888776553
No 467
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=79.76 E-value=14 Score=33.33 Aligned_cols=69 Identities=19% Similarity=0.275 Sum_probs=42.7
Q ss_pred EEEE--cCeeeccccChhhHHHHHhhhhcccCCCCCeEEEEecchhHHHHH-HHhcCCCCEEEEEEcCHHHHHH
Q 019550 74 VLVI--DGKMQSAEVDEFIYHECLIHPPLLCHQNPKTVFIMGGGEGSAARE-ALKHKSLEKVVMCDIDQEVVDF 144 (339)
Q Consensus 74 ~L~l--dG~~q~~~~d~~~Y~e~l~~~~l~~~~~p~~VL~IG~G~G~~~~~-l~~~~~~~~v~~VEid~~vi~~ 144 (339)
+++. ||.+....-|..-+.+.+... ...+..+++|+||+|+.+-+.. .+...+..+|+.+..+++=.+.
T Consensus 93 Ti~~~~dG~l~G~NTD~~Gf~~~L~~~--g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~ 164 (269)
T 3tum_A 93 VIRRERDGRLLGDNVDGAGFLGAAHKH--GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGA 164 (269)
T ss_dssp EEEECTTSCEEEECCHHHHHHHHHHHT--TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHH
T ss_pred EEEECCCCEEEEEEcChHHHHHHHHHh--CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHH
Confidence 4544 566666666654444554432 1234578999999987664433 2334677899999998764443
No 468
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=79.33 E-value=5.7 Score=38.71 Aligned_cols=67 Identities=15% Similarity=0.241 Sum_probs=44.7
Q ss_pred CeEEEEecchhHHHHHHHhcC--CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHH--HHHhcC-CceeE
Q 019550 107 KTVFIMGGGEGSAAREALKHK--SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA--ELEKRN-EKFDV 181 (339)
Q Consensus 107 ~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~--~l~~~~-~~yDv 181 (339)
-+|+++|+|. ++..+++.. ....|++||.|++.++.+.+.+ .+.++.||+.+ .|++.. +..|+
T Consensus 4 M~iiI~G~G~--vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----------~~~~i~Gd~~~~~~L~~Agi~~ad~ 71 (461)
T 4g65_A 4 MKIIILGAGQ--VGGTLAENLVGENNDITIVDKDGDRLRELQDKY----------DLRVVNGHASHPDVLHEAGAQDADM 71 (461)
T ss_dssp EEEEEECCSH--HHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----------SCEEEESCTTCHHHHHHHTTTTCSE
T ss_pred CEEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----------CcEEEEEcCCCHHHHHhcCCCcCCE
Confidence 4799999873 333333321 2467999999999988766543 35678899864 355443 67898
Q ss_pred EEec
Q 019550 182 IFGD 185 (339)
Q Consensus 182 Ii~D 185 (339)
++.-
T Consensus 72 ~ia~ 75 (461)
T 4g65_A 72 LVAV 75 (461)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8763
No 469
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=79.32 E-value=17 Score=33.01 Aligned_cols=77 Identities=22% Similarity=0.224 Sum_probs=44.1
Q ss_pred CeEEEEecchhH--HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEe
Q 019550 107 KTVFIMGGGEGS--AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFG 184 (339)
Q Consensus 107 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~ 184 (339)
.+|.+||+|.=+ ++..+++..-..+|+++|++++.++.....+.... .+...++++...|. +.+ +..|+|++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~d~-~~~----~~aDvVii 75 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAM-ANLEAHGNIVINDW-AAL----ADADVVIS 75 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG-GGSSSCCEEEESCG-GGG----TTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhh-hhcCCCeEEEeCCH-HHh----CCCCEEEE
Confidence 379999988533 33334432112589999999987765443222110 01123455545663 322 46899999
Q ss_pred cCCCC
Q 019550 185 DLADP 189 (339)
Q Consensus 185 D~~d~ 189 (339)
-...+
T Consensus 76 av~~~ 80 (309)
T 1hyh_A 76 TLGNI 80 (309)
T ss_dssp CCSCG
T ss_pred ecCCc
Confidence 88754
No 470
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=79.29 E-value=1.6 Score=41.07 Aligned_cols=34 Identities=21% Similarity=0.391 Sum_probs=25.8
Q ss_pred CCeEEEEecchhHHH--HHHHhcCCCCEEEEEEcCH
Q 019550 106 PKTVFIMGGGEGSAA--REALKHKSLEKVVMCDIDQ 139 (339)
Q Consensus 106 p~~VL~IG~G~G~~~--~~l~~~~~~~~v~~VEid~ 139 (339)
.|||++||+|.+++. ..+.+..+..+|++||-++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 589999999987754 3355555557999999875
No 471
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=78.95 E-value=1 Score=41.36 Aligned_cols=89 Identities=18% Similarity=0.355 Sum_probs=55.3
Q ss_pred eEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEc-cH-HHHHHh-cCCceeEE
Q 019550 108 TVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVN-DA-KAELEK-RNEKFDVI 182 (339)
Q Consensus 108 ~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~-D~-~~~l~~-~~~~yDvI 182 (339)
+||++|+ |-|..+..+++..+ .+|++++.+++-.+.+++. +.. .++.. |. .+.++. ..+.+|+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga~---------~v~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREAADYLKQL-GAS---------EVISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSSTHHHHHHH-TCS---------EEEEHHHHCSSCCCSSCCCCEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CCc---------EEEECCCchHHHHHHhhcCCccEE
Confidence 7999995 56777778888776 4699999988877888764 211 11111 10 000111 12469988
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+-... + +.++. +.+.|+++|.++.-
T Consensus 222 id~~g-----~--------~~~~~-~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 222 VDPVG-----G--------KQLAS-LLSKIQYGGSVAVS 246 (330)
T ss_dssp EESCC-----T--------HHHHH-HHTTEEEEEEEEEC
T ss_pred EECCc-----H--------HHHHH-HHHhhcCCCEEEEE
Confidence 75432 1 23555 56899999998864
No 472
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=78.86 E-value=7.7 Score=35.90 Aligned_cols=91 Identities=19% Similarity=0.256 Sum_probs=52.4
Q ss_pred CeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHH----HHHHHHHhhhhhccccCCCCeEEEE------ccHHHHHHh
Q 019550 107 KTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQE----VVDFCRRFLTVNQEAFCSKKLNLVV------NDAKAELEK 174 (339)
Q Consensus 107 ~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~----vi~~ar~~f~~~~~~~~~~rv~v~~------~D~~~~l~~ 174 (339)
++||++|+ |-|.++.++++..+. +++++.-+++ ..+.+++. +. . .++. .|..+.+.+
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~l-Ga-------~--~vi~~~~~~~~~~~~~i~~ 237 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKEL-GA-------T--QVITEDQNNSREFGPTIKE 237 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHH-TC-------S--EEEEHHHHHCGGGHHHHHH
T ss_pred cEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccHHHHHHHHhc-CC-------e--EEEecCccchHHHHHHHHH
Confidence 78999985 567778888887764 5666654332 24455443 21 1 1121 233334432
Q ss_pred ----cCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 175 ----RNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 175 ----~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
..+.+|+|+-... + .... . +.+.|+++|.++.-.
T Consensus 238 ~t~~~~~g~Dvvid~~G-----~-------~~~~-~-~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 238 WIKQSGGEAKLALNCVG-----G-------KSST-G-IARKLNNNGLMLTYG 275 (364)
T ss_dssp HHHHHTCCEEEEEESSC-----H-------HHHH-H-HHHTSCTTCEEEECC
T ss_pred HhhccCCCceEEEECCC-----c-------hhHH-H-HHHHhccCCEEEEec
Confidence 1357999985543 1 1233 3 357899999988643
No 473
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=78.85 E-value=0.24 Score=58.30 Aligned_cols=88 Identities=14% Similarity=0.146 Sum_probs=0.0
Q ss_pred eEEEEecchhHHHHHHHhcCC-----CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHh--------
Q 019550 108 TVFIMGGGEGSAAREALKHKS-----LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEK-------- 174 (339)
Q Consensus 108 ~VL~IG~G~G~~~~~l~~~~~-----~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~-------- 174 (339)
+||+||.|+|.+...+++... ..+.+..|+++...+.+++.|.... +..
T Consensus 1243 ~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d------------------i~~~~~d~~~~ 1304 (2512)
T 2vz8_A 1243 KVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH------------------VTQGQWDPANP 1304 (2512)
T ss_dssp EEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT------------------EEEECCCSSCC
T ss_pred eEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc------------------ccccccccccc
Q ss_pred ---cCCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEE
Q 019550 175 ---RNEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 175 ---~~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~ 220 (339)
....||+||....-+...... +.++. +++.|+|||.+++
T Consensus 1305 ~~~~~~~ydlvia~~vl~~t~~~~------~~l~~-~~~lL~p~G~l~~ 1346 (2512)
T 2vz8_A 1305 APGSLGKADLLVCNCALATLGDPA------VAVGN-MAATLKEGGFLLL 1346 (2512)
T ss_dssp CC-----CCEEEEECC---------------------------CCEEEE
T ss_pred ccCCCCceeEEEEcccccccccHH------HHHHH-HHHhcCCCcEEEE
No 474
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=78.83 E-value=1.9 Score=41.43 Aligned_cols=60 Identities=17% Similarity=0.184 Sum_probs=42.4
Q ss_pred hHHHHHhhhh-----cccCCCCCeEEEEecchhHHHHHHHhcC-------CCCEEEEEEcCHHHHHHHHHhh
Q 019550 90 IYHECLIHPP-----LLCHQNPKTVFIMGGGEGSAAREALKHK-------SLEKVVMCDIDQEVVDFCRRFL 149 (339)
Q Consensus 90 ~Y~e~l~~~~-----l~~~~~p~~VL~IG~G~G~~~~~l~~~~-------~~~~v~~VEid~~vi~~ar~~f 149 (339)
.|-+++.... .+..+.+-.|+++|.|.|.++.-+++.. ...++..||++|...+.=++.+
T Consensus 60 ~FGe~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 60 MFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 5666655321 1223455679999999999998887531 2358999999999988766655
No 475
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=78.76 E-value=11 Score=33.44 Aligned_cols=76 Identities=18% Similarity=0.226 Sum_probs=47.9
Q ss_pred CCCeEEEEecchhH---HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH------HHh-
Q 019550 105 NPKTVFIMGGGEGS---AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE------LEK- 174 (339)
Q Consensus 105 ~p~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~------l~~- 174 (339)
..+.||+.|+++|. +++.+++ . ..+|.+++.+++-++...+.+... ..++.++..|..+. ++.
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~-~-G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAA-R-GIAVYGCARDAKNVSAAVDGLRAA-----GHDVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHH-T-TCEEEEEESCHHHHHHHHHHHHTT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 35678888865442 3344444 3 368999999988776655554332 46788888886532 211
Q ss_pred --cCCceeEEEecCC
Q 019550 175 --RNEKFDVIFGDLA 187 (339)
Q Consensus 175 --~~~~yDvIi~D~~ 187 (339)
.-++.|++|.++.
T Consensus 96 ~~~~g~id~lv~nAg 110 (279)
T 3sju_A 96 VERFGPIGILVNSAG 110 (279)
T ss_dssp HHHHCSCCEEEECCC
T ss_pred HHHcCCCcEEEECCC
Confidence 1257899999885
No 476
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=78.73 E-value=17 Score=31.75 Aligned_cols=78 Identities=12% Similarity=0.114 Sum_probs=49.5
Q ss_pred CCCeEEEEecchhHHHHHHHhcC--CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH------HHh--
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK--SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE------LEK-- 174 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~------l~~-- 174 (339)
..+.||+.|++ |++++++++.. ...+|.+++.+++-++...+.+... ..++.++..|..+. ++.
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-----GGEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHH
Confidence 35678888865 44554444321 2368999999988777665554432 36788888886432 111
Q ss_pred -cCCceeEEEecCCC
Q 019550 175 -RNEKFDVIFGDLAD 188 (339)
Q Consensus 175 -~~~~yDvIi~D~~d 188 (339)
.-++.|++|..+.-
T Consensus 102 ~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 102 AAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 12579999998763
No 477
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=78.70 E-value=8.9 Score=32.28 Aligned_cols=69 Identities=13% Similarity=0.156 Sum_probs=43.1
Q ss_pred eEEEEecchhHHHHHHHhcC--CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEec
Q 019550 108 TVFIMGGGEGSAAREALKHK--SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGD 185 (339)
Q Consensus 108 ~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D 185 (339)
+||+.|+ +|.+++.+++.. ...+|+++..++.-.+.. ..++++++.+|..+.-...-+..|+||..
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ 69 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-----------LGATVATLVKEPLVLTEADLDSVDAVVDA 69 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----------TCTTSEEEECCGGGCCHHHHTTCSEEEEC
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc-----------cCCCceEEecccccccHhhcccCCEEEEC
Confidence 5888885 344444444321 236899999987654321 13678899999764311112468999998
Q ss_pred CCC
Q 019550 186 LAD 188 (339)
Q Consensus 186 ~~d 188 (339)
+..
T Consensus 70 ag~ 72 (224)
T 3h2s_A 70 LSV 72 (224)
T ss_dssp CCC
T ss_pred Ccc
Confidence 764
No 478
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=78.64 E-value=12 Score=32.91 Aligned_cols=76 Identities=14% Similarity=0.247 Sum_probs=46.9
Q ss_pred CCCeEEEEecchhH---HHHHHHhcCCCCEEEEEEcC------------HHHHHHHHHhhhhhccccCCCCeEEEEccHH
Q 019550 105 NPKTVFIMGGGEGS---AAREALKHKSLEKVVMCDID------------QEVVDFCRRFLTVNQEAFCSKKLNLVVNDAK 169 (339)
Q Consensus 105 ~p~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid------------~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~ 169 (339)
..+.||+.|+++|. +++.+++ . ..+|.+++.+ ++-++...+.+... ..++.++..|..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~-~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~ 84 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAA-D-GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-----GSRIVARQADVR 84 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH-T-TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-----TCCEEEEECCTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-C-CCeEEEEecccccccccccccchHHHHHHHHHHHhc-----CCeEEEEeCCCC
Confidence 45788888865442 3344444 3 4689999987 55555444433322 467888888865
Q ss_pred HH------HHh---cCCceeEEEecCC
Q 019550 170 AE------LEK---RNEKFDVIFGDLA 187 (339)
Q Consensus 170 ~~------l~~---~~~~yDvIi~D~~ 187 (339)
+. ++. .-++.|++|.++.
T Consensus 85 ~~~~v~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 85 DRESLSAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 32 221 1257999999885
No 479
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=78.57 E-value=31 Score=29.99 Aligned_cols=77 Identities=10% Similarity=0.072 Sum_probs=48.0
Q ss_pred CCCeEEEEecchh-H----HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHH------HHH
Q 019550 105 NPKTVFIMGGGEG-S----AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKA------ELE 173 (339)
Q Consensus 105 ~p~~VL~IG~G~G-~----~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~------~l~ 173 (339)
+.+.||+.|++++ + +++.+++ . ..+|.+++.++...+.+++..... ...++.++..|..+ .++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~-~-G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE-A-GARLIFTYAGERLEKSVHELAGTL----DRNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-T-TCEEEEEESSGGGHHHHHHHHHTS----SSCCCEEEECCCSSSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-C-CCEEEEecCchHHHHHHHHHHHhc----CCCCceEEeCCCCCHHHHHHHHH
Confidence 4678999997633 2 4444554 3 368999998876655555543322 13478888888643 122
Q ss_pred h---cCCceeEEEecCC
Q 019550 174 K---RNEKFDVIFGDLA 187 (339)
Q Consensus 174 ~---~~~~yDvIi~D~~ 187 (339)
. .-++.|++|.++.
T Consensus 80 ~~~~~~g~id~li~~Ag 96 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIA 96 (266)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHhCCeeEEEEccc
Confidence 1 1257899999875
No 480
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=78.52 E-value=23 Score=33.15 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=66.9
Q ss_pred CCeEEEEecch--hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 106 PKTVFIMGGGE--GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 106 p~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
..+|.+||+|. ..+++.+++ .+ .+|+++|.+++.++.+.+. .+. ...|..+.++.. ++.|+|+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~-~G-~~V~v~dr~~~~~~~l~~~-----------g~~-~~~s~~e~~~~a-~~~DvVi 86 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRK-GG-HECVVYDLNVNAVQALERE-----------GIA-GARSIEEFCAKL-VKPRVVW 86 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TT-CEEEEECSCHHHHHHHHTT-----------TCB-CCSSHHHHHHHS-CSSCEEE
T ss_pred CCEEEEECchHHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHHHHC-----------CCE-EeCCHHHHHhcC-CCCCEEE
Confidence 46899999984 334555555 33 6899999999887765542 111 234555555543 4579999
Q ss_pred ecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHhH
Q 019550 184 GDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQV 244 (339)
Q Consensus 184 ~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~~ 244 (339)
+-.+++ ...+.++. +...|++|-+++ ..++. .......+.+.+.+.
T Consensus 87 ~~vp~~---------~v~~vl~~-l~~~l~~g~iiI-d~st~----~~~~~~~~~~~l~~~ 132 (358)
T 4e21_A 87 LMVPAA---------VVDSMLQR-MTPLLAANDIVI-DGGNS----HYQDDIRRADQMRAQ 132 (358)
T ss_dssp ECSCGG---------GHHHHHHH-HGGGCCTTCEEE-ECSSC----CHHHHHHHHHHHHTT
T ss_pred EeCCHH---------HHHHHHHH-HHhhCCCCCEEE-eCCCC----ChHHHHHHHHHHHHC
Confidence 987643 24577787 678888876665 44321 122334455555543
No 481
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=78.44 E-value=31 Score=30.09 Aligned_cols=76 Identities=18% Similarity=0.230 Sum_probs=49.6
Q ss_pred CCCeEEEEecchhH---HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH------HHh-
Q 019550 105 NPKTVFIMGGGEGS---AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE------LEK- 174 (339)
Q Consensus 105 ~p~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~------l~~- 174 (339)
+.+.||+.|+++|. +++.+++ . ..+|.+++.+++-++...+.+... ..++.++..|..+. ++.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~-~-G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAE-Q-GADLVLAARTVERLEDVAKQVTDT-----GRRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHH-T-TCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHH-C-cCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 45789998876542 3344444 3 368999999988776655554332 46788888886532 211
Q ss_pred --cCCceeEEEecCC
Q 019550 175 --RNEKFDVIFGDLA 187 (339)
Q Consensus 175 --~~~~yDvIi~D~~ 187 (339)
.-++.|++|.++.
T Consensus 83 ~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 83 MKAYGRVDVVINNAF 97 (264)
T ss_dssp HHHTSCCSEEEECCC
T ss_pred HHHcCCCcEEEECCC
Confidence 1257999999884
No 482
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=78.14 E-value=24 Score=34.16 Aligned_cols=109 Identities=13% Similarity=0.147 Sum_probs=60.9
Q ss_pred CCeEEEEecchhHHHHH-HHhcCCCCEEEEEEcCHHHHHHHHHhh-hhhccc----c--CCCCeEEEEccHHHHHHhcCC
Q 019550 106 PKTVFIMGGGEGSAARE-ALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQEA----F--CSKKLNLVVNDAKAELEKRNE 177 (339)
Q Consensus 106 p~~VL~IG~G~G~~~~~-l~~~~~~~~v~~VEid~~vi~~ar~~f-~~~~~~----~--~~~rv~v~~~D~~~~l~~~~~ 177 (339)
-.+|.+||+|.=+.+.. ++. . .-+|+++|++++.++..++.. +..... + ...++++ ..|..+.+ +
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La-~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~-ttd~~ea~----~ 108 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIA-Q-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA-TTDKHDAY----R 108 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHH----T
T ss_pred CCEEEEECcCHHHHHHHHHHH-c-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEE-EcCHHHHH----h
Confidence 35899999995444332 223 2 368999999999998776531 000000 0 0124433 34544444 3
Q ss_pred ceeEEEecCCCCCCC--CccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 178 KFDVIFGDLADPVEG--GPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 178 ~yDvIi~D~~d~~~~--~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
..|+||+-.+.+... +.+.--+-.+..+. +.. |++|-+++..+.
T Consensus 109 ~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~-i~~-l~~g~iVV~~ST 154 (432)
T 3pid_A 109 NADYVIIATPTDYDPKTNYFNTSTVEAVIRD-VTE-INPNAVMIIKST 154 (432)
T ss_dssp TCSEEEECCCCEEETTTTEEECHHHHHHHHH-HHH-HCTTSEEEECSC
T ss_pred CCCEEEEeCCCccccccccccHHHHHHHHHH-HHh-cCCCcEEEEeCC
Confidence 469999988754210 00010123455666 566 998887776543
No 483
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=78.11 E-value=2.4 Score=39.90 Aligned_cols=54 Identities=17% Similarity=0.172 Sum_probs=31.9
Q ss_pred cChhhHHHHHhhhhccc--CCCCCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCH
Q 019550 86 VDEFIYHECLIHPPLLC--HQNPKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQ 139 (339)
Q Consensus 86 ~d~~~Y~e~l~~~~l~~--~~~p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 139 (339)
.+...|.+.+..+..-. .-...+||++|+|+ |+-....+...++.+++.+|-|.
T Consensus 14 ~~~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 14 EEAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 34457877654322110 11357999999974 33333333346889999998763
No 484
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=77.99 E-value=23 Score=32.57 Aligned_cols=71 Identities=14% Similarity=0.171 Sum_probs=46.0
Q ss_pred CCCeEEEEecch--hHHHHHHHhcCCCCEEE-EEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeE
Q 019550 105 NPKTVFIMGGGE--GSAAREALKHKSLEKVV-MCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~--G~~~~~l~~~~~~~~v~-~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
++.+|.+||+|. ...+..+.++.+..+++ ++|.+++-.+.+.+.++ + -...|..+.+.. ...|+
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~----------~-~~~~~~~~ll~~--~~~D~ 78 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTG----------A-RGHASLTDMLAQ--TDADI 78 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHC----------C-EEESCHHHHHHH--CCCSE
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcC----------C-ceeCCHHHHhcC--CCCCE
Confidence 456899999993 33455555552445655 78999887665444322 2 245777777764 46899
Q ss_pred EEecCCC
Q 019550 182 IFGDLAD 188 (339)
Q Consensus 182 Ii~D~~d 188 (339)
|++-.++
T Consensus 79 V~i~tp~ 85 (354)
T 3q2i_A 79 VILTTPS 85 (354)
T ss_dssp EEECSCG
T ss_pred EEECCCc
Confidence 9987763
No 485
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=77.99 E-value=6.2 Score=35.03 Aligned_cols=87 Identities=16% Similarity=0.145 Sum_probs=54.5
Q ss_pred eEEEEecch--hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEec
Q 019550 108 TVFIMGGGE--GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGD 185 (339)
Q Consensus 108 ~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D 185 (339)
+|.+||+|. +.++..+.+ .+ .+|++++.+++.++.+++. ... . + ...|.. .. ...|+|++-
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~-~g-~~V~~~~~~~~~~~~~~~~-g~~------~--~-~~~~~~----~~-~~~D~vi~a 64 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR-RG-HYLIGVSRQQSTCEKAVER-QLV------D--E-AGQDLS----LL-QTAKIIFLC 64 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TT-CEEEEECSCHHHHHHHHHT-TSC------S--E-EESCGG----GG-TTCSEEEEC
T ss_pred EEEEEcCcHHHHHHHHHHHH-CC-CEEEEEECCHHHHHHHHhC-CCC------c--c-ccCCHH----Hh-CCCCEEEEE
Confidence 689999984 334444444 33 4799999999887766543 110 0 1 233422 23 468999998
Q ss_pred CCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEec
Q 019550 186 LADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQA 222 (339)
Q Consensus 186 ~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~ 222 (339)
.+.. ...+.++. +...++++.++ ++.
T Consensus 65 v~~~---------~~~~~~~~-l~~~~~~~~~v-v~~ 90 (279)
T 2f1k_A 65 TPIQ---------LILPTLEK-LIPHLSPTAIV-TDV 90 (279)
T ss_dssp SCHH---------HHHHHHHH-HGGGSCTTCEE-EEC
T ss_pred CCHH---------HHHHHHHH-HHhhCCCCCEE-EEC
Confidence 7632 24577777 67788887765 454
No 486
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=77.98 E-value=19 Score=26.94 Aligned_cols=77 Identities=14% Similarity=0.218 Sum_probs=48.8
Q ss_pred CCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhc-CCceeEEEecCCCCCCCCccccCCcHHHHHHH
Q 019550 129 LEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKR-NEKFDVIFGDLADPVEGGPCYQLYTKSFYERI 207 (339)
Q Consensus 129 ~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~ 207 (339)
..+|..||-|+...+..++.+...+ -.+ ....++.+.++.. ...+|+|++|..-+.. -..++.+.
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g-----~~v-~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~-------~g~~~~~~- 72 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLG-----ATT-VLAADGVDALELLGGFTPDLMICDIAMPRM-------NGLKLLEH- 72 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTT-----CEE-EEESCHHHHHHHHTTCCCSEEEECCC------------CHHHHHH-
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCC-----ceE-EEeCCHHHHHHHHhcCCCCEEEEecCCCCC-------CHHHHHHH-
Confidence 4689999999999998888876531 223 3466777766543 4579999999874431 13477787
Q ss_pred HccccCCCc-EEEE
Q 019550 208 LKPKLNDNG-IFVT 220 (339)
Q Consensus 208 ~~~~L~~gG-ilv~ 220 (339)
+++. .++. ++++
T Consensus 73 l~~~-~~~~~ii~~ 85 (130)
T 3eod_A 73 IRNR-GDQTPVLVI 85 (130)
T ss_dssp HHHT-TCCCCEEEE
T ss_pred HHhc-CCCCCEEEE
Confidence 5653 3444 4444
No 487
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=77.83 E-value=13 Score=35.09 Aligned_cols=100 Identities=14% Similarity=0.193 Sum_probs=56.7
Q ss_pred eEEEEecchhHHHH-HHHhcCCCCEEEEEE---cCHHHHHHHHHhhh--hhccccCC------CCeEEEEccHHHHHHhc
Q 019550 108 TVFIMGGGEGSAAR-EALKHKSLEKVVMCD---IDQEVVDFCRRFLT--VNQEAFCS------KKLNLVVNDAKAELEKR 175 (339)
Q Consensus 108 ~VL~IG~G~G~~~~-~l~~~~~~~~v~~VE---id~~vi~~ar~~f~--~~~~~~~~------~rv~v~~~D~~~~l~~~ 175 (339)
+|.+||+|.-+.+. ..+......+|++++ .+++.++.+.+.-. .+...... .++.....|..+.+
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~--- 80 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAI--- 80 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHH---
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHh---
Confidence 79999999644333 223222235899999 87777765322111 01000000 11222445544333
Q ss_pred CCceeEEEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 176 NEKFDVIFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 176 ~~~yDvIi~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
+.+|+||+-.+... ..+.++. +...|+++-+++..
T Consensus 81 -~~aD~Vilav~~~~---------~~~v~~~-l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 81 -SGADVVILTVPAFA---------HEGYFQA-MAPYVQDSALIVGL 115 (404)
T ss_dssp -TTCSEEEECSCGGG---------HHHHHHH-HTTTCCTTCEEEET
T ss_pred -CCCCEEEEeCchHH---------HHHHHHH-HHhhCCCCcEEEEc
Confidence 35899999876331 4678888 78889888776653
No 488
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=77.80 E-value=11 Score=33.74 Aligned_cols=99 Identities=12% Similarity=0.190 Sum_probs=55.3
Q ss_pred CeEEEEecchh--HHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCC---CCeEEEEccHHHHHHhcCCceeE
Q 019550 107 KTVFIMGGGEG--SAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCS---KKLNLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 107 ~~VL~IG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~---~rv~v~~~D~~~~l~~~~~~yDv 181 (339)
.+|.+||+|.- .++..+++ .+ .+|++++.+++.++..++.- ........ .++++. +..+ +...-+.+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-~g-~~V~~~~r~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~d~ 77 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ-GG-NDVTLIDQWPAHIEAIRKNG-LIADFNGEEVVANLPIF--SPEE-IDHQNEQVDL 77 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TT-CEEEEECSCHHHHHHHHHHC-EEEEETTEEEEECCCEE--CGGG-CCTTSCCCSE
T ss_pred CeEEEECcCHHHHHHHHHHHh-CC-CcEEEEECCHHHHHHHHhCC-EEEEeCCCeeEecceee--cchh-hcccCCCCCE
Confidence 37999999843 34444444 33 58999999998877665541 11000000 011111 1111 0000127999
Q ss_pred EEecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEe
Q 019550 182 IFGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQ 221 (339)
Q Consensus 182 Ii~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~ 221 (339)
|++-.+.. ...+.++. +...|+++.+++..
T Consensus 78 vi~~v~~~---------~~~~v~~~-l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 78 IIALTKAQ---------QLDAMFKA-IQPMITEKTYVLCL 107 (316)
T ss_dssp EEECSCHH---------HHHHHHHH-HGGGCCTTCEEEEC
T ss_pred EEEEeccc---------cHHHHHHH-HHHhcCCCCEEEEe
Confidence 99987632 14677888 78889887766643
No 489
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=77.70 E-value=2.9 Score=36.05 Aligned_cols=71 Identities=17% Similarity=0.191 Sum_probs=44.3
Q ss_pred CCCeEEEEecchhHHHHHHHhcC--CCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCe-EEEEccHHHHHHhcCCceeE
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK--SLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKL-NLVVNDAKAELEKRNEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv-~v~~~D~~~~l~~~~~~yDv 181 (339)
..++||+.|+ +|.+++++++.. ...+|+++..++.-.+..+ ..++ +++.+|..+.+...-+..|+
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~D~ 87 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-----------ERGASDIVVANLEEDFSHAFASIDA 87 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-----------HTTCSEEEECCTTSCCGGGGTTCSE
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-----------hCCCceEEEcccHHHHHHHHcCCCE
Confidence 4678999985 344444444321 2368999999876543222 2367 88888876323222357999
Q ss_pred EEecCC
Q 019550 182 IFGDLA 187 (339)
Q Consensus 182 Ii~D~~ 187 (339)
||..+.
T Consensus 88 vi~~ag 93 (236)
T 3e8x_A 88 VVFAAG 93 (236)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999876
No 490
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=77.65 E-value=10 Score=34.18 Aligned_cols=76 Identities=21% Similarity=0.327 Sum_probs=49.7
Q ss_pred CCCeEEEEecchhH---HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH------HHh-
Q 019550 105 NPKTVFIMGGGEGS---AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE------LEK- 174 (339)
Q Consensus 105 ~p~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~------l~~- 174 (339)
+.+.||+.|+++|. +++.+++ .+ .+|.+++.+++-++...+.+... ..++.++..|..+. ++.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~-~G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFAR-RG-ARLVLSDVDQPALEQAVNGLRGQ-----GFDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TT-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-CC-CEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHHH
Confidence 45788988876442 3344444 33 68999999988877666555432 36788888886542 111
Q ss_pred --cCCceeEEEecCC
Q 019550 175 --RNEKFDVIFGDLA 187 (339)
Q Consensus 175 --~~~~yDvIi~D~~ 187 (339)
.-++.|++|.++.
T Consensus 103 ~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHSSCSEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 1247999999886
No 491
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=77.63 E-value=18 Score=32.94 Aligned_cols=104 Identities=13% Similarity=0.153 Sum_probs=50.4
Q ss_pred eEEEEecchhHH--HHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEEEec
Q 019550 108 TVFIMGGGEGSA--AREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVIFGD 185 (339)
Q Consensus 108 ~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi~D 185 (339)
+|.+||+|.-+. +..++...-..+|+.+|++++.++.....+.... .+ ....++...|. +-+ +..|+||.-
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~-~~-~~~~~i~~~~~-~a~----~~aDvVIi~ 74 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAA-PV-SHGTRVWHGGH-SEL----ADAQVVILT 74 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSC-CT-TSCCEEEEECG-GGG----TTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhh-hh-cCCeEEEECCH-HHh----CCCCEEEEc
Confidence 789999984333 3333332213489999999986653222221110 11 13344444442 212 457999998
Q ss_pred CCCCCCCCcc-ccCC------cHHHHHHHHccccCCCcEEEE
Q 019550 186 LADPVEGGPC-YQLY------TKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 186 ~~d~~~~~p~-~~L~------t~ef~~~~~~~~L~~gGilv~ 220 (339)
...|...+.. ..+. -++..+. +.+. .|++++++
T Consensus 75 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~-i~~~-~p~~~vi~ 114 (304)
T 2v6b_A 75 AGANQKPGESRLDLLEKNADIFRELVPQ-ITRA-APDAVLLV 114 (304)
T ss_dssp C------------CHHHHHHHHHHHHHH-HHHH-CSSSEEEE
T ss_pred CCCCCCCCCcHHHHHHhHHHHHHHHHHH-HHHh-CCCeEEEE
Confidence 7543211110 0111 1455555 4444 79998765
No 492
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=77.10 E-value=16 Score=35.70 Aligned_cols=98 Identities=18% Similarity=0.123 Sum_probs=61.5
Q ss_pred CCCeEEEEecchh--HHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 105 NPKTVFIMGGGEG--SAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
..++|.+||+|.= .+++.+++ .+ -+|++++.+++.++...+..+ ++.+. ...|..+.++.. ++.|+|
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~-~G-~~V~v~~r~~~~~~~l~~~~~-------~~gi~-~~~s~~e~v~~l-~~aDvV 82 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIES-RG-YTVSIFNRSREKTEEVIAENP-------GKKLV-PYYTVKEFVESL-ETPRRI 82 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHT-TT-CCEEEECSSHHHHHHHHHHST-------TSCEE-ECSSHHHHHHTB-CSSCEE
T ss_pred CCCeEEEEccHHHHHHHHHHHHh-CC-CeEEEEeCCHHHHHHHHhhCC-------CCCeE-EeCCHHHHHhCC-CCCCEE
Confidence 4568999999943 34455554 33 479999999988776554321 12333 234555555432 357999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecC
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
++-.+++. ..++.++. +...|++|-+++ +.+
T Consensus 83 il~Vp~~~--------~v~~vl~~-l~~~l~~g~iII-d~s 113 (480)
T 2zyd_A 83 LLMVKAGA--------GTDAAIDS-LKPYLDKGDIII-DGG 113 (480)
T ss_dssp EECSCSSS--------HHHHHHHH-HGGGCCTTCEEE-ECS
T ss_pred EEECCCHH--------HHHHHHHH-HHhhcCCCCEEE-ECC
Confidence 99987532 14577787 678888876655 543
No 493
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=77.02 E-value=3.3 Score=38.79 Aligned_cols=69 Identities=26% Similarity=0.399 Sum_probs=40.3
Q ss_pred CCCeEEEEecc-hhHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHH--HHHHhcCCceeE
Q 019550 105 NPKTVFIMGGG-EGSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAK--AELEKRNEKFDV 181 (339)
Q Consensus 105 ~p~~VL~IG~G-~G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~--~~l~~~~~~yDv 181 (339)
...|||+||+| .|......+. ....|++++++.+-++.+++. +..+.-|+. +.|...-+..|+
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~--~~~~v~~~~~~~~~~~~~~~~------------~~~~~~d~~d~~~l~~~~~~~Dv 80 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLK--DEFDVYIGDVNNENLEKVKEF------------ATPLKVDASNFDKLVEVMKEFEL 80 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHT--TTSEEEEEESCHHHHHHHTTT------------SEEEECCTTCHHHHHHHHTTCSE
T ss_pred CccEEEEECCCHHHHHHHHHHh--cCCCeEEEEcCHHHHHHHhcc------------CCcEEEecCCHHHHHHHHhCCCE
Confidence 45689999985 2333222332 235799999999887766543 222333432 223333356899
Q ss_pred EEecCC
Q 019550 182 IFGDLA 187 (339)
Q Consensus 182 Ii~D~~ 187 (339)
||.-.+
T Consensus 81 Vi~~~p 86 (365)
T 3abi_A 81 VIGALP 86 (365)
T ss_dssp EEECCC
T ss_pred EEEecC
Confidence 888665
No 494
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=76.95 E-value=24 Score=33.05 Aligned_cols=108 Identities=16% Similarity=0.174 Sum_probs=60.0
Q ss_pred CCCeEEEEecch--hHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHHHHhcCCceeEE
Q 019550 105 NPKTVFIMGGGE--GSAAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAELEKRNEKFDVI 182 (339)
Q Consensus 105 ~p~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvI 182 (339)
..++|.+||+|. ..+++. ++.++ .+|.+.+.++.-.+.+++. .++. ..+..+.+ ++.|+|
T Consensus 163 ~gktvGIIG~G~IG~~vA~~-l~~~G-~~V~~~dr~~~~~~~~~~~-----------g~~~-~~~l~ell----~~aDvV 224 (351)
T 3jtm_A 163 EGKTIGTVGAGRIGKLLLQR-LKPFG-CNLLYHDRLQMAPELEKET-----------GAKF-VEDLNEML----PKCDVI 224 (351)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HGGGC-CEEEEECSSCCCHHHHHHH-----------CCEE-CSCHHHHG----GGCSEE
T ss_pred cCCEEeEEEeCHHHHHHHHH-HHHCC-CEEEEeCCCccCHHHHHhC-----------CCeE-cCCHHHHH----hcCCEE
Confidence 367899999983 233333 33354 5799999876444433332 1111 13443433 357999
Q ss_pred EecCCCCCCCCccccCCcHHHHHHHHccccCCCcEEEEecCCCCccCchhhHHHHHHHHHh
Q 019550 183 FGDLADPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQ 243 (339)
Q Consensus 183 i~D~~d~~~~~p~~~L~t~ef~~~~~~~~L~~gGilv~~~~~~~~~~~~~~~~~i~~~l~~ 243 (339)
++..+... ...+++..+.+.. |++|.++ +|++.. ..-.-..+.+.|++
T Consensus 225 ~l~~Plt~---~t~~li~~~~l~~-----mk~gail-IN~aRG----~~vde~aL~~aL~~ 272 (351)
T 3jtm_A 225 VINMPLTE---KTRGMFNKELIGK-----LKKGVLI-VNNARG----AIMERQAVVDAVES 272 (351)
T ss_dssp EECSCCCT---TTTTCBSHHHHHH-----SCTTEEE-EECSCG----GGBCHHHHHHHHHH
T ss_pred EECCCCCH---HHHHhhcHHHHhc-----CCCCCEE-EECcCc----hhhCHHHHHHHHHh
Confidence 99988432 1245667766554 6776665 576421 11123456666664
No 495
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=76.85 E-value=14 Score=33.73 Aligned_cols=78 Identities=22% Similarity=0.311 Sum_probs=49.5
Q ss_pred CCCeEEEEecchhH---HHHHHHhcCCCCEEEEEEcCHHHHHHHHHhhhhhccccCCCCeEEEEccHHHH------HH--
Q 019550 105 NPKTVFIMGGGEGS---AAREALKHKSLEKVVMCDIDQEVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE------LE-- 173 (339)
Q Consensus 105 ~p~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~------l~-- 173 (339)
..+.||+.|+++|. +++.+++ . ..+|.+++.+++-++.+.+.+.... .+.++.++..|..+. ++
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~-~-G~~Vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLN-Q-GCKVAIADIRQDSIDKALATLEAEG---SGPEVMGVQLDVASREGFKMAADEV 81 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHH-T-TCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHH-C-CCEEEEEECCHHHHHHHHHHHHhcC---CCCeEEEEECCCCCHHHHHHHHHHH
Confidence 35688998876442 3334443 3 3689999999887776655544321 124788888886432 21
Q ss_pred -hcCCceeEEEecCC
Q 019550 174 -KRNEKFDVIFGDLA 187 (339)
Q Consensus 174 -~~~~~yDvIi~D~~ 187 (339)
..-++.|++|.++.
T Consensus 82 ~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 82 EARFGPVSILCNNAG 96 (319)
T ss_dssp HHHTCCEEEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 12257899999986
No 496
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=76.82 E-value=18 Score=33.47 Aligned_cols=107 Identities=21% Similarity=0.117 Sum_probs=55.0
Q ss_pred CCeEEEEecchhHHH-HHHHhcCCCCEEEEEEcCHHHHHHHHHhhhh-hccccCCCCeEEEEccHHHHHHhcCCceeEEE
Q 019550 106 PKTVFIMGGGEGSAA-REALKHKSLEKVVMCDIDQEVVDFCRRFLTV-NQEAFCSKKLNLVVNDAKAELEKRNEKFDVIF 183 (339)
Q Consensus 106 p~~VL~IG~G~G~~~-~~l~~~~~~~~v~~VEid~~vi~~ar~~f~~-~~~~~~~~rv~v~~~D~~~~l~~~~~~yDvIi 183 (339)
+.+|.+||+|.=+.+ ..++...+..+|+.+|+|++.++.....+.. ........+++.. .|. +-+ +.-|+||
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~-~al----~~aD~VI 87 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY-EYL----QNSDVVI 87 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG-GGG----TTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH-HHH----CCCCEEE
Confidence 468999999854433 2233334443699999999877753322211 1000012344432 553 322 4579999
Q ss_pred ecCCCCCCCCcc-ccCC------cHHHHHHHHccccCCCcEEEE
Q 019550 184 GDLADPVEGGPC-YQLY------TKSFYERILKPKLNDNGIFVT 220 (339)
Q Consensus 184 ~D~~d~~~~~p~-~~L~------t~ef~~~~~~~~L~~gGilv~ 220 (339)
.-..-|...+.. ..+. -.+.++. +.+. .|++++++
T Consensus 88 ~avg~p~k~g~tr~dl~~~n~~i~~~i~~~-i~~~-~p~a~viv 129 (328)
T 2hjr_A 88 ITAGVPRKPNMTRSDLLTVNAKIVGSVAEN-VGKY-CPNAFVIC 129 (328)
T ss_dssp ECCSCCCCTTCCSGGGHHHHHHHHHHHHHH-HHHH-CTTCEEEE
T ss_pred EcCCCCCCCCCchhhHHhhhHHHHHHHHHH-HHHH-CCCeEEEE
Confidence 987433311110 1111 2344555 3433 58998764
No 497
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=76.73 E-value=4.1 Score=39.61 Aligned_cols=34 Identities=21% Similarity=0.443 Sum_probs=23.6
Q ss_pred CCeEEEEecch-hHHHHHHHhcCCCCEEEEEEcCH
Q 019550 106 PKTVFIMGGGE-GSAAREALKHKSLEKVVMCDIDQ 139 (339)
Q Consensus 106 p~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 139 (339)
..+||++|+|+ |+-....+...++.+++.+|-|.
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 46899999974 33333333347889999999763
No 498
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=76.65 E-value=17 Score=35.17 Aligned_cols=107 Identities=16% Similarity=0.211 Sum_probs=59.6
Q ss_pred CCCeEEEEecchhHH--HHHHHhcCCCCEEEEEEcCHHHHHHHHHhh-hhhcc--------ccCCCCeEEEEccHHHHHH
Q 019550 105 NPKTVFIMGGGEGSA--AREALKHKSLEKVVMCDIDQEVVDFCRRFL-TVNQE--------AFCSKKLNLVVNDAKAELE 173 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~ar~~f-~~~~~--------~~~~~rv~v~~~D~~~~l~ 173 (339)
...+.-+||+|-=++ +..+++ .+ -+|+++|+|++.++..++-- +.... .....++++- .|.
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~-~G-~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td~----- 81 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAK-HG-VDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TTP----- 81 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHH-TT-CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SSC-----
T ss_pred cCCccEEEeeCHHHHHHHHHHHH-CC-CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cch-----
Confidence 356789999994443 444444 33 58999999999998776531 11000 0002334332 231
Q ss_pred hcCCceeEEEecCCCCCCCC--ccccC-CcHHHHHHHHccccCCCcEEEEecC
Q 019550 174 KRNEKFDVIFGDLADPVEGG--PCYQL-YTKSFYERILKPKLNDNGIFVTQAG 223 (339)
Q Consensus 174 ~~~~~yDvIi~D~~d~~~~~--p~~~L-~t~ef~~~~~~~~L~~gGilv~~~~ 223 (339)
+.-|+||+-.+.|.... -...+ +-....+. +.+.|++|-+++..++
T Consensus 82 ---~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~-i~~~l~~g~iVV~~ST 130 (431)
T 3ojo_A 82 ---EASDVFIIAVPTPNNDDQYRSCDISLVMRALDS-ILPFLKKGNTIIVEST 130 (431)
T ss_dssp ---CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHH-HGGGCCTTEEEEECSC
T ss_pred ---hhCCEEEEEeCCCccccccCCccHHHHHHHHHH-HHHhCCCCCEEEEecC
Confidence 35799999988765210 00111 11233455 5778998877776554
No 499
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=76.62 E-value=3.3 Score=38.50 Aligned_cols=44 Identities=14% Similarity=0.150 Sum_probs=31.3
Q ss_pred CCCeEEEEec--chhHHHHHHHhcCCCCEEEEEEcCHH---HHHHHHHh
Q 019550 105 NPKTVFIMGG--GEGSAAREALKHKSLEKVVMCDIDQE---VVDFCRRF 148 (339)
Q Consensus 105 ~p~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~---vi~~ar~~ 148 (339)
..++||++|+ |-|.++.++++..+...|.+++.++. -.+.+++.
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l 215 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSL 215 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHT
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhc
Confidence 4678999995 57788888888777666677776543 35566653
No 500
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=76.59 E-value=32 Score=30.71 Aligned_cols=78 Identities=15% Similarity=0.177 Sum_probs=44.2
Q ss_pred CCCeEEEEecchhHHHHHHHhcC--CCCEEEEEEcCH--HHHHHHHHhhhhhccccCCCCeEEEEccHHHH------HHh
Q 019550 105 NPKTVFIMGGGEGSAAREALKHK--SLEKVVMCDIDQ--EVVDFCRRFLTVNQEAFCSKKLNLVVNDAKAE------LEK 174 (339)
Q Consensus 105 ~p~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~--~vi~~ar~~f~~~~~~~~~~rv~v~~~D~~~~------l~~ 174 (339)
+.+.||+.|++ |++++++++.. ...+|.+++.+. .-.+...+..... ..++.++..|..+. ++.
T Consensus 48 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 48 KDRKALVTGGD-SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC-----GRKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT-----TCCEEECCCCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc-----CCcEEEEEecCCCHHHHHHHHHH
Confidence 35678888865 44444444321 236788888862 3333333332222 35778888776432 211
Q ss_pred ---cCCceeEEEecCCC
Q 019550 175 ---RNEKFDVIFGDLAD 188 (339)
Q Consensus 175 ---~~~~yDvIi~D~~d 188 (339)
.-++.|++|.++.-
T Consensus 122 ~~~~~g~iD~lv~nAg~ 138 (294)
T 3r3s_A 122 AREALGGLDILALVAGK 138 (294)
T ss_dssp HHHHHTCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 12578999998863
Done!