Your job contains 1 sequence.
>019554
MEEDIDGDIEDIEALNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDP
EYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDL
TLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVES
RMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFR
VGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEK
WQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERKFLR
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019554
(339 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2195698 - symbol:emb1220 "AT1G60170" species:3... 1083 1.3e-109 1
MGI|MGI:1916238 - symbol:Prpf31 "PRP31 pre-mRNA processin... 668 1.2e-65 1
UNIPROTKB|E1BM48 - symbol:PRPF31 "Uncharacterized protein... 665 2.5e-65 1
UNIPROTKB|F1PKI0 - symbol:PRPF31 "Uncharacterized protein... 665 2.5e-65 1
UNIPROTKB|E7ESA8 - symbol:PRPF31 "U4/U6 small nuclear rib... 664 3.2e-65 1
UNIPROTKB|Q8WWY3 - symbol:PRPF31 "U4/U6 small nuclear rib... 664 3.2e-65 1
UNIPROTKB|F1RNI3 - symbol:PRPF31 "Uncharacterized protein... 662 5.2e-65 1
UNIPROTKB|Q5U5C5 - symbol:prpf31 "U4/U6 small nuclear rib... 659 1.1e-64 1
UNIPROTKB|Q6NVP6 - symbol:prpf31 "U4/U6 small nuclear rib... 653 4.7e-64 1
UNIPROTKB|E7EVX8 - symbol:PRPF31 "U4/U6 small nuclear rib... 642 6.9e-63 1
ZFIN|ZDB-GENE-040426-1561 - symbol:prpf31 "PRP31 pre-mRNA... 637 2.3e-62 1
FB|FBgn0036487 - symbol:Prp31 species:7227 "Drosophila me... 594 8.4e-58 1
DICTYBASE|DDB_G0289595 - symbol:prpf31 "pre-mRNA processi... 570 2.9e-55 1
UNIPROTKB|E7EN72 - symbol:PRPF31 "U4/U6 small nuclear rib... 534 1.9e-51 1
WB|WBGene00022458 - symbol:prp-31 species:6239 "Caenorhab... 525 1.7e-50 1
POMBASE|SPBC119.13c - symbol:prp31 "U4/U6 x U5 tri-snRNP ... 524 2.2e-50 1
UNIPROTKB|E7ESX0 - symbol:PRPF31 "U4/U6 small nuclear rib... 515 2.0e-49 1
UNIPROTKB|E7EU94 - symbol:PRPF31 "U4/U6 small nuclear rib... 496 2.0e-47 1
TAIR|locus:2016134 - symbol:AT1G70400 "AT1G70400" species... 461 1.0e-43 1
GENEDB_PFALCIPARUM|PFD0450c - symbol:PFD0450c "pre-mrna s... 390 3.5e-36 1
UNIPROTKB|C0H4A0 - symbol:PFD0450c "Pre-mRNA splicing fac... 390 3.5e-36 1
RGD|1305832 - symbol:Prpf31 "PRP31 pre-mRNA processing fa... 375 1.3e-34 1
ASPGD|ASPL0000059636 - symbol:AN1260 species:162425 "Emer... 356 1.6e-32 1
POMBASE|SPAC23G3.06 - symbol:SPAC23G3.06 "U3 snoRNP prote... 269 9.9e-23 1
SGD|S000003323 - symbol:PRP31 "Splicing factor" species:4... 266 1.9e-22 1
UNIPROTKB|Q58105 - symbol:MJ0694 "Uncharacterized NOP5 fa... 255 1.4e-21 1
UNIPROTKB|E1BUS2 - symbol:NOP58 "Uncharacterized protein"... 258 1.8e-21 1
UNIPROTKB|Q97ZH3 - symbol:SSO0939 "Pre mRNA splicing prot... 252 3.1e-21 1
ASPGD|ASPL0000037939 - symbol:nop58 species:162425 "Emeri... 256 3.9e-21 1
WB|WBGene00020915 - symbol:nol-5 species:6239 "Caenorhabd... 246 2.9e-20 1
UNIPROTKB|I3LDD2 - symbol:NOP58 "Uncharacterized protein"... 243 3.4e-20 1
UNIPROTKB|F1N218 - symbol:NOP58 "Uncharacterized protein"... 244 6.1e-20 1
UNIPROTKB|Q9Y2X3 - symbol:NOP58 "Nucleolar protein 58" sp... 243 7.8e-20 1
DICTYBASE|DDB_G0268098 - symbol:nop58 "nucleolar protein ... 244 9.5e-20 1
UNIPROTKB|G4N2E5 - symbol:MGG_07915 "Uncharacterized prot... 241 1.2e-19 1
UNIPROTKB|G4MPA1 - symbol:MGG_07008 "Nucleolar protein no... 241 1.7e-19 1
SGD|S000005837 - symbol:NOP58 "Protein involved in pre-rR... 239 2.0e-19 1
TAIR|locus:2181211 - symbol:AT5G27120 "AT5G27120" species... 233 9.8e-19 1
ASPGD|ASPL0000040023 - symbol:AN10352 species:162425 "Eme... 232 1.1e-18 1
FB|FBgn0026196 - symbol:nop5 "nop5" species:7227 "Drosoph... 232 1.1e-18 1
TAIR|locus:2096214 - symbol:AT3G05060 "AT3G05060" species... 232 1.3e-18 1
RGD|620484 - symbol:Nop58 "NOP58 ribonucleoprotein" speci... 232 1.3e-18 1
UNIPROTKB|F1MW06 - symbol:NOP56 "Nucleolar protein 56" sp... 233 1.3e-18 1
UNIPROTKB|Q3SZ63 - symbol:NOP56 "Nucleolar protein 56" sp... 233 1.3e-18 1
GENEDB_PFALCIPARUM|PF10_0085 - symbol:PF10_0085 "nucleola... 227 3.1e-18 1
UNIPROTKB|Q8IJV7 - symbol:PF10_0085 "Nucleolar protein NO... 227 3.1e-18 1
MGI|MGI:1914384 - symbol:Nop56 "NOP56 ribonucleoprotein" ... 229 3.2e-18 1
UNIPROTKB|O00567 - symbol:NOP56 "Nucleolar protein 56" sp... 229 3.4e-18 1
UNIPROTKB|E2QU53 - symbol:NOP56 "Uncharacterized protein"... 229 3.4e-18 1
RGD|1308892 - symbol:Nop56 "NOP56 ribonucleoprotein" spec... 227 3.7e-18 1
MGI|MGI:1933184 - symbol:Nop58 "NOP58 ribonucleoprotein" ... 227 4.4e-18 1
UNIPROTKB|Q4KLK7 - symbol:Nol5a "RCG26515, isoform CRA_c"... 227 5.5e-18 1
ZFIN|ZDB-GENE-040109-1 - symbol:nop56 "NOP56 ribonucleopr... 224 9.9e-18 1
FB|FBgn0038964 - symbol:Nop56 "Nop56" species:7227 "Droso... 217 4.5e-17 1
SGD|S000004187 - symbol:NOP56 "Nucleolar protein componen... 210 2.7e-16 1
DICTYBASE|DDB_G0285679 - symbol:nol5a "NOP5 family protei... 209 4.0e-16 1
CGD|CAL0000142 - symbol:SIK1 species:5476 "Candida albica... 207 6.0e-16 1
UNIPROTKB|Q5ACS3 - symbol:SIK1 "Putative uncharacterized ... 207 6.0e-16 1
WB|WBGene00010627 - symbol:K07C5.4 species:6239 "Caenorha... 206 6.8e-16 1
TAIR|locus:2205270 - symbol:NOP56 "homolog of nucleolar p... 200 3.2e-15 2
POMBASE|SPBC646.10c - symbol:SPBC646.10c "U3 snoRNP prote... 203 6.0e-15 1
TAIR|locus:2087755 - symbol:AT3G12860 species:3702 "Arabi... 192 8.4e-14 2
UNIPROTKB|H9L0K4 - symbol:H9L0K4 "Uncharacterized protein... 135 5.0e-06 2
>TAIR|locus:2195698 [details] [associations]
symbol:emb1220 "AT1G60170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009793 "embryo development ending in
seed dormancy" evidence=NAS] InterPro:IPR027105 Pfam:PF01798
EMBL:CP002684 GO:GO:0003676 GO:GO:0030529 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 EMBL:AY080777
EMBL:AY117155 EMBL:AY084782 IPI:IPI00547292 RefSeq:NP_564754.1
UniGene:At.21797 ProteinModelPortal:Q8RXN6 SMR:Q8RXN6 STRING:Q8RXN6
PRIDE:Q8RXN6 EnsemblPlants:AT1G60170.1 GeneID:842312
KEGG:ath:AT1G60170 TAIR:At1g60170 InParanoid:Q8RXN6
PhylomeDB:Q8RXN6 ProtClustDB:CLSN2688931 ArrayExpress:Q8RXN6
Genevestigator:Q8RXN6 Uniprot:Q8RXN6
Length = 485
Score = 1083 (386.3 bits), Expect = 1.3e-109, P = 1.3e-109
Identities = 225/306 (73%), Positives = 243/306 (79%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
LNYDDLDNVSKLQKSQR+ DIM KVE AL SD + G VLEDDPEY+LIVDCN LSVD
Sbjct: 46 LNYDDLDNVSKLQKSQRYADIMHKVEEALGKDSDGAEKGTVLEDDPEYKLIVDCNQLSVD 105
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAII 134
IENEIVI+HNFI+DKY+LKF ELESLVHHPIDYA VVKKIGNE DL LVDL LLPSAII
Sbjct: 106 IENEIVIVHNFIKDKYKLKFQELESLVHHPIDYACVVKKIGNETDLALVDLADLLPSAII 165
Query: 135 MVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVG 194
MVVSVTA TT G LPEDVLQK + FVES+M IAPNLSAIVG
Sbjct: 166 MVVSVTALTTKGSALPEDVLQKVLEACDRALDLDSARKKVLEFVESKMGSIAPNLSAIVG 225
Query: 195 SAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTP 254
SAVAAKLMGTAGGLSALAKMPACNVQ+LG K+KNLAGFS+ATSQ RVGYLEQTEI+QSTP
Sbjct: 226 SAVAAKLMGTAGGLSALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEIYQSTP 285
Query: 255 PPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQEXXXXXXXXXXX 314
P L+ RA RL+AAKSTLAARVD+TRGDP G +G++FREEI KKIEKWQE
Sbjct: 286 PGLQARAGRLVAAKSTLAARVDATRGDPLGISGKAFREEIRKKIEKWQEPPPARQPKPLP 345
Query: 315 XXDSEP 320
DSEP
Sbjct: 346 VPDSEP 351
>MGI|MGI:1916238 [details] [associations]
symbol:Prpf31 "PRP31 pre-mRNA processing factor 31 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=ISO;ISA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal body"
evidence=ISA] [GO:0016607 "nuclear speck" evidence=ISA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0043021
"ribonucleoprotein complex binding" evidence=ISA] [GO:0046540
"U4/U6 x U5 tri-snRNP complex" evidence=ISA] [GO:0070990 "snRNP
binding" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR027105 MGI:MGI:1916238 Pfam:PF01798 GO:GO:0016607
GO:GO:0005681 GO:GO:0000244 GO:GO:0003723 GO:GO:0015030
GO:GO:0043021 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
EMBL:AC130680 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 CTD:26121
GeneTree:ENSGT00550000075069 HOVERGEN:HBG082193 KO:K12844
OMA:VESDPEY OrthoDB:EOG4W6NW1 InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 GO:GO:0070990 EMBL:AY040823 EMBL:AK005294
EMBL:AK033190 EMBL:AK033283 EMBL:AK044398 EMBL:AK044457
EMBL:AK051260 EMBL:CT010189 EMBL:BC018376 EMBL:BC057877
EMBL:BC061461 IPI:IPI00331424 IPI:IPI00459791 IPI:IPI00625183
IPI:IPI00742282 IPI:IPI00742413 RefSeq:NP_001153186.1
RefSeq:NP_081604.3 UniGene:Mm.246863 ProteinModelPortal:Q8CCF0
SMR:Q8CCF0 STRING:Q8CCF0 PhosphoSite:Q8CCF0 PaxDb:Q8CCF0
PRIDE:Q8CCF0 DNASU:68988 Ensembl:ENSMUST00000008517
Ensembl:ENSMUST00000108636 Ensembl:ENSMUST00000179769 GeneID:68988
KEGG:mmu:68988 UCSC:uc009evi.2 UCSC:uc012ewf.1 InParanoid:Q8CCF0
NextBio:328355 Bgee:Q8CCF0 Genevestigator:Q8CCF0
GermOnline:ENSMUSG00000008373 Uniprot:Q8CCF0
Length = 499
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 138/291 (47%), Positives = 194/291 (66%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
L+ D + +++KL S+ F +IM K+E + +++S +E PEY++IVD N L+V+
Sbjct: 43 LSGDSVKSIAKLWDSKMFAEIMMKIEEYISKQANVSEVMGPVEAAPEYRVIVDANNLTVE 102
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSA 132
IENE+ IIH FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A
Sbjct: 103 IENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNA 162
Query: 133 IIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAI 192
IMVVSVTASTT G+ L ++ L++ +VESRMS+IAPNLS I
Sbjct: 163 TIMVVSVTASTTQGQQLSDEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSII 222
Query: 193 VGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQS 252
+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+GFS+ + GY+ ++I QS
Sbjct: 223 IGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQS 282
Query: 253 TPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
PP LR +A RL+AAK TLAARVDS G G ++EI +K +KWQE
Sbjct: 283 LPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQE 333
>UNIPROTKB|E1BM48 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0070990 "snRNP
binding" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0015030 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
CTD:26121 GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 GO:GO:0070990
EMBL:DAAA02047818 IPI:IPI00691365 RefSeq:NP_001193214.1
UniGene:Bt.5160 Ensembl:ENSBTAT00000010198 GeneID:513577
KEGG:bta:513577 NextBio:20870922 Uniprot:E1BM48
Length = 499
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 139/291 (47%), Positives = 192/291 (65%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
L+ D + +++KL S+ F +IM K+E + + S +E PEY++IVD N L+V+
Sbjct: 43 LSGDSVKSIAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVE 102
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSA 132
IENE+ IIH FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A
Sbjct: 103 IENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNA 162
Query: 133 IIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAI 192
IMVVSVTASTT G+ L E+ L++ +VESRMS+IAPNLS I
Sbjct: 163 TIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSII 222
Query: 193 VGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQS 252
+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+GFS+ + GY+ ++I QS
Sbjct: 223 IGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQS 282
Query: 253 TPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
PP LR +A RL+AAK TLAARVDS G G ++EI +K +KWQE
Sbjct: 283 LPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQE 333
>UNIPROTKB|F1PKI0 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0070990 "snRNP binding" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA] [GO:0005687
"U4 snRNP" evidence=IEA] [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] InterPro:IPR027105 Pfam:PF01798
GO:GO:0016607 GO:GO:0000244 GO:GO:0015030 GO:GO:0071339
GO:GO:0046540 GO:GO:0005687 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 CTD:26121 GeneTree:ENSGT00550000075069
KO:K12844 OMA:VESDPEY InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 GO:GO:0070990 EMBL:AAEX03000741 RefSeq:XP_850917.1
Ensembl:ENSCAFT00000004264 GeneID:476389 KEGG:cfa:476389
Uniprot:F1PKI0
Length = 499
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 139/291 (47%), Positives = 192/291 (65%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
L+ D + +++KL S+ F +IM K+E + + S +E PEY++IVD N L+V+
Sbjct: 43 LSGDSVKSIAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVE 102
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSA 132
IENE+ IIH FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A
Sbjct: 103 IENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNA 162
Query: 133 IIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAI 192
IMVVSVTASTT G+ L E+ L++ +VESRMS+IAPNLS I
Sbjct: 163 TIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSII 222
Query: 193 VGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQS 252
+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+GFS+ + GY+ ++I QS
Sbjct: 223 IGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQS 282
Query: 253 TPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
PP LR +A RL+AAK TLAARVDS G G ++EI +K +KWQE
Sbjct: 283 LPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQE 333
>UNIPROTKB|E7ESA8 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 IPI:IPI00738596
HGNC:HGNC:15446 ProteinModelPortal:E7ESA8 SMR:E7ESA8 PRIDE:E7ESA8
Ensembl:ENST00000419967 UCSC:uc010yek.1 ArrayExpress:E7ESA8
Bgee:E7ESA8 Uniprot:E7ESA8
Length = 450
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 139/291 (47%), Positives = 191/291 (65%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
L+ D + ++KL S+ F +IM K+E + + S +E PEY++IVD N L+V+
Sbjct: 43 LSGDSVKTIAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVE 102
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSA 132
IENE+ IIH FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A
Sbjct: 103 IENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNA 162
Query: 133 IIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAI 192
IMVVSVTASTT G+ L E+ L++ +VESRMS+IAPNLS I
Sbjct: 163 TIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSII 222
Query: 193 VGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQS 252
+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+GFS+ + GY+ ++I QS
Sbjct: 223 IGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQS 282
Query: 253 TPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
PP LR +A RL+AAK TLAARVDS G G ++EI +K +KWQE
Sbjct: 283 LPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQE 333
>UNIPROTKB|Q8WWY3 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IMP;IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0015030 "Cajal body"
evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IDA] [GO:0046540
"U4/U6 x U5 tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070990 "snRNP binding" evidence=IPI] [GO:0005690
"U4atac snRNP" evidence=TAS] [GO:0005687 "U4 snRNP" evidence=IDA]
[GO:0005684 "U2-type spliceosomal complex" evidence=IC]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0003723 Orphanet:791 GO:GO:0015030 GO:GO:0071339
GO:GO:0046540 GO:GO:0005684 GO:GO:0005687 EMBL:AC012314 PDB:2OZB
PDB:3SIU PDB:3SIV PDBsum:2OZB PDBsum:3SIU PDBsum:3SIV
eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 CTD:26121 HOVERGEN:HBG082193
KO:K12844 OMA:VESDPEY OrthoDB:EOG4W6NW1 InterPro:IPR019175
PANTHER:PTHR13904 Pfam:PF09785 EMBL:AY040822 EMBL:AF308303
EMBL:AL050369 EMBL:AK098547 EMBL:BC117389 IPI:IPI00167198
IPI:IPI00292000 IPI:IPI00738596 RefSeq:NP_056444.3
UniGene:Hs.515598 ProteinModelPortal:Q8WWY3 SMR:Q8WWY3
IntAct:Q8WWY3 STRING:Q8WWY3 PhosphoSite:Q8WWY3 DMDM:90101442
PaxDb:Q8WWY3 PRIDE:Q8WWY3 DNASU:26121 Ensembl:ENST00000321030
Ensembl:ENST00000571534 Ensembl:ENST00000571610
Ensembl:ENST00000572776 Ensembl:ENST00000574214
Ensembl:ENST00000576100 Ensembl:ENST00000576581
Ensembl:ENST00000576817 Ensembl:ENST00000576989 GeneID:26121
KEGG:hsa:26121 UCSC:uc002qdh.2 GeneCards:GC19P054618
H-InvDB:HIX0027609 H-InvDB:HIX0137464 HGNC:HGNC:15446 HPA:HPA041939
MIM:600138 MIM:606419 neXtProt:NX_Q8WWY3 PharmGKB:PA33814
HOGENOM:HOG000207983 InParanoid:Q8WWY3 PhylomeDB:Q8WWY3
EvolutionaryTrace:Q8WWY3 GenomeRNAi:26121 NextBio:48131
ArrayExpress:Q8WWY3 Bgee:Q8WWY3 CleanEx:HS_PRPF31
Genevestigator:Q8WWY3 GermOnline:ENSG00000105618 GO:GO:0005690
GO:GO:0070990 Uniprot:Q8WWY3
Length = 499
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 139/291 (47%), Positives = 191/291 (65%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
L+ D + ++KL S+ F +IM K+E + + S +E PEY++IVD N L+V+
Sbjct: 43 LSGDSVKTIAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVE 102
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSA 132
IENE+ IIH FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A
Sbjct: 103 IENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNA 162
Query: 133 IIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAI 192
IMVVSVTASTT G+ L E+ L++ +VESRMS+IAPNLS I
Sbjct: 163 TIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSII 222
Query: 193 VGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQS 252
+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+GFS+ + GY+ ++I QS
Sbjct: 223 IGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQS 282
Query: 253 TPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
PP LR +A RL+AAK TLAARVDS G G ++EI +K +KWQE
Sbjct: 283 LPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQE 333
>UNIPROTKB|F1RNI3 [details] [associations]
symbol:PRPF31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0070990 "snRNP
binding" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0016607 GO:GO:0000244
GO:GO:0015030 GO:GO:0071339 GO:GO:0046540 GO:GO:0005687
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 GO:GO:0070990
EMBL:FP476135 RefSeq:XP_003127461.2 Ensembl:ENSSSCT00000003624
GeneID:100520791 KEGG:ssc:100520791 Uniprot:F1RNI3
Length = 499
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 138/291 (47%), Positives = 192/291 (65%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
L+ D + +++KL S+ F +IM K+E + +D + +E PEY +IVD N L+V+
Sbjct: 43 LSGDSVKSIAKLWDSKMFAEIMLKIEEYISKQADAAEVMGPVEAAPEYPVIVDANNLTVE 102
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSA 132
IENE+ IIH FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A
Sbjct: 103 IENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNA 162
Query: 133 IIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAI 192
IMVVSVTASTT G+ L ++ L++ +VESRMS+IAPNLS I
Sbjct: 163 TIMVVSVTASTTQGQQLSDEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSII 222
Query: 193 VGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQS 252
+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+GFS+ + GY+ ++I QS
Sbjct: 223 IGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQS 282
Query: 253 TPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
PP LR +A RL+AAK TLAARVDS G G ++EI +K +KWQE
Sbjct: 283 LPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQE 333
>UNIPROTKB|Q5U5C5 [details] [associations]
symbol:prpf31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:8355 "Xenopus laevis" [GO:0071339 "MLL1 complex"
evidence=ISS] InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380
GO:GO:0006397 GO:GO:0005681 GO:GO:0003723 GO:GO:0071339
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 CTD:26121 HOVERGEN:HBG082193 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 EMBL:BC084759
RefSeq:NP_001088437.1 UniGene:Xl.48511 ProteinModelPortal:Q5U5C5
SMR:Q5U5C5 GeneID:495301 KEGG:xla:495301 Xenbase:XB-GENE-865857
Uniprot:Q5U5C5
Length = 498
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 139/291 (47%), Positives = 192/291 (65%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
LN + + +++KL S+ F++I+ K+E +Q S +E PEY++IVD N L+V+
Sbjct: 42 LNAESVKSIAKLSDSKLFSEILLKIEGYIQKQPKASEVMGPVEAAPEYKVIVDANNLTVE 101
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSA 132
IENE+ IIH FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A
Sbjct: 102 IENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNA 161
Query: 133 IIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAI 192
IMVVSVTASTT G+ L ++ L++ +VESRMS+IAPNLS I
Sbjct: 162 TIMVVSVTASTTQGQQLTDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSII 221
Query: 193 VGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQS 252
VG++ AAK+MG AGGL+ L+KMPACNV LLGA++K L GFS+ + GY+ +EI QS
Sbjct: 222 VGASTAAKIMGIAGGLTNLSKMPACNVMLLGAQRKTLTGFSSTSVLPHTGYIYHSEIVQS 281
Query: 253 TPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
P L +A RL++AK TLA+RVDS +P G G +EEI +K +KWQE
Sbjct: 282 LPSDLHRKAARLVSAKCTLASRVDSFHENPEGKIGYDLKEEIERKFDKWQE 332
>UNIPROTKB|Q6NVP6 [details] [associations]
symbol:prpf31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0071339 "MLL1
complex" evidence=ISS] InterPro:IPR027105 Pfam:PF01798
GO:GO:0005681 GO:GO:0003723 GO:GO:0060041 GO:GO:0000398
GO:GO:0071339 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 CTD:26121
GeneTree:ENSGT00550000075069 HOVERGEN:HBG082193 KO:K12844
OrthoDB:EOG4W6NW1 InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 EMBL:BC067959 RefSeq:NP_998859.1
UniGene:Str.66282 ProteinModelPortal:Q6NVP6 SMR:Q6NVP6
STRING:Q6NVP6 Ensembl:ENSXETT00000023852 GeneID:407890
KEGG:xtr:407890 Xenbase:XB-GENE-489336 InParanoid:Q6NVP6
OMA:ESTEGKX Bgee:Q6NVP6 Uniprot:Q6NVP6
Length = 498
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 137/291 (47%), Positives = 192/291 (65%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
LN + + +++KL S+ F++I+ K++ ++ S +E PEY++IVD N L+V+
Sbjct: 42 LNAESVKSIAKLSDSKLFSEILLKIDGYIKKQPKASEVMGPVEAAPEYKVIVDANNLTVE 101
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSA 132
IENE+ IIH FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A
Sbjct: 102 IENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNA 161
Query: 133 IIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAI 192
IMVVSVTASTT G+ L ++ L++ +VESRMS+IAPNLS I
Sbjct: 162 TIMVVSVTASTTQGQQLTDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSII 221
Query: 193 VGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQS 252
VG++ AAK+MG AGGL+ L+KMPACNV LLGA++K L+GFS+ + GY+ ++I QS
Sbjct: 222 VGASTAAKIMGIAGGLTNLSKMPACNVMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQS 281
Query: 253 TPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
PP L +A RL++AK TLAARVDS G G +EEI +K +KWQE
Sbjct: 282 LPPDLHRKAARLVSAKCTLAARVDSFHESSEGKVGYDLKEEIERKFDKWQE 332
>UNIPROTKB|E7EVX8 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 HGNC:HGNC:15446
IPI:IPI00657721 ProteinModelPortal:E7EVX8 SMR:E7EVX8 PRIDE:E7EVX8
Ensembl:ENST00000391755 ArrayExpress:E7EVX8 Bgee:E7EVX8
Uniprot:E7EVX8
Length = 493
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 138/291 (47%), Positives = 190/291 (65%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
L+ D + ++KL S+ F +IM K+E + + S +E PEY++IVD N L+V+
Sbjct: 43 LSGDSVKTIAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVE 102
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSA 132
IENE+ IIH FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A
Sbjct: 103 IENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNA 162
Query: 133 IIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAI 192
IMVVSVTASTT G+ L E+ L++ +VESRMS+IAPNLS I
Sbjct: 163 TIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSII 222
Query: 193 VGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQS 252
+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+GFS+ + GY+ ++I QS
Sbjct: 223 IGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQS 282
Query: 253 TPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
PP LR +A RL+AAK TLAARVDS G ++EI +K +KWQE
Sbjct: 283 LPPDLRRKAARLVAAKCTLAARVDSFHESTEG------KDEIERKFDKWQE 327
>ZFIN|ZDB-GENE-040426-1561 [details] [associations]
symbol:prpf31 "PRP31 pre-mRNA processing factor 31
homolog (yeast)" species:7955 "Danio rerio" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;IMP] [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IMP] [GO:0071339 "MLL1
complex" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR027105 Pfam:PF01798
ZFIN:ZDB-GENE-040426-1561 GO:GO:0005681 GO:GO:0003723 GO:GO:0060041
GO:GO:0000398 GO:GO:0071339 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358
EMBL:BC055531 IPI:IPI00508030 RefSeq:NP_956798.1 UniGene:Dr.76439
ProteinModelPortal:Q7SXM7 SMR:Q7SXM7 STRING:Q7SXM7 PRIDE:Q7SXM7
Ensembl:ENSDART00000137029 GeneID:393476 KEGG:dre:393476 CTD:26121
GeneTree:ENSGT00550000075069 HOGENOM:HOG000202033
HOVERGEN:HBG082193 InParanoid:Q7SXM7 KO:K12844 OMA:VESDPEY
OrthoDB:EOG4W6NW1 NextBio:20814506 ArrayExpress:Q7SXM7 Bgee:Q7SXM7
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 Uniprot:Q7SXM7
Length = 508
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 133/288 (46%), Positives = 188/288 (65%)
Query: 18 DDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIEN 77
+ + +++KL+ S+ F +IM K+ + N S +E DPEY+LIV N L+V+I+N
Sbjct: 57 ESVTSIAKLRHSKPFAEIMDKISHYVGNQRKNSEVSGPVEADPEYRLIVAANNLTVEIDN 116
Query: 78 EIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVD--LEGLLPSAIIM 135
E+ IIH F+RDKY +FPELESLV + +DY R VK++GN ++ + L+ +L +A IM
Sbjct: 117 ELNIIHKFVRDKYSKRFPELESLVPNALDYIRTVKELGNNLEKCKNNETLQQILTNATIM 176
Query: 136 VVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGS 195
VVSVTASTT G L +D LQ+ +VESRMS+IAPNLS IVG+
Sbjct: 177 VVSVTASTTQGTMLGDDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGA 236
Query: 196 AVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPP 255
+ AAK+MG AGGL+ L+KMPACN+ LLGA+++ L+GFS+ + GY+ ++ Q+ PP
Sbjct: 237 STAAKIMGVAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQTLPP 296
Query: 256 PLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
LR +A RL++AK TLA+RVDS G G +EEI +K +KWQE
Sbjct: 297 DLRRKAARLVSAKCTLASRVDSFHESADGKVGYDLKEEIERKFDKWQE 344
>FB|FBgn0036487 [details] [associations]
symbol:Prp31 species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS] [GO:0000244 "assembly
of spliceosomal tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR027105 Pfam:PF01798 EMBL:AE014296 GO:GO:0022008
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 HSSP:O28191
EMBL:AY051928 RefSeq:NP_648756.1 UniGene:Dm.9673 SMR:Q9VUM1
STRING:Q9VUM1 EnsemblMetazoa:FBtr0075642 GeneID:39655
KEGG:dme:Dmel_CG6876 UCSC:CG6876-RA CTD:39655 FlyBase:FBgn0036487
InParanoid:Q9VUM1 OrthoDB:EOG4JWSVZ GenomeRNAi:39655 NextBio:814716
Uniprot:Q9VUM1
Length = 501
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 131/282 (46%), Positives = 179/282 (63%)
Query: 25 KLQKSQRFTDIMQKVEA-ALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIH 83
KL+ S+R + +Q++E A + + G V E DPEY LIVD N ++VDI+NEI I+H
Sbjct: 61 KLRDSERLKNTLQQIEHYASRQRTAAEMLGSV-ESDPEYCLIVDANAIAVDIDNEISIVH 119
Query: 84 NFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVD--LEGLLPSAIIMVVSVTA 141
F ++KY+ +FPEL+SL+ I+Y VK++GN++D + L+ +L A IM+VSVTA
Sbjct: 120 KFTKEKYQKRFPELDSLIVGEIEYLLAVKELGNDLDQVKNNEKLQAILTQATIMIVSVTA 179
Query: 142 STTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKL 201
STT G L K +VESRM++IAPNLS IVG++ AAKL
Sbjct: 180 STTQGTMLTPAEKAKIDEACEMAIELNNFKSKIYEYVESRMTFIAPNLSMIVGASTAAKL 239
Query: 202 MGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRA 261
+G AGGLS L+KMPACNVQ+LGA+KK L+GFS GY+ ++I Q T P LR +A
Sbjct: 240 LGIAGGLSKLSKMPACNVQVLGAQKKTLSGFSQTQMLPHTGYVYYSQIVQDTAPDLRRKA 299
Query: 262 CRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
RL+AAKS LAARVD+ G G F+E++ KK++K QE
Sbjct: 300 ARLVAAKSVLAARVDACHESVHGEIGLRFKEDVEKKLDKLQE 341
>DICTYBASE|DDB_G0289595 [details] [associations]
symbol:prpf31 "pre-mRNA processing factor 31"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA;ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IEA;ISS] [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=IEA] InterPro:IPR027105
dictyBase:DDB_G0289595 Pfam:PF01798 GenomeReviews:CM000154_GR
GO:GO:0000398 GO:GO:0046540 EMBL:AAFI02000146 eggNOG:COG1498
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 OMA:RDHYSIR
RefSeq:XP_002649103.1 EnsemblProtists:DDB0304959 GeneID:8627218
KEGG:ddi:DDB_G0289595 ProtClustDB:CLSZ2735590 Uniprot:C7G068
Length = 460
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 121/288 (42%), Positives = 187/288 (64%)
Query: 20 LDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVL-EDDPEYQLIVDCNVLSVDIENE 78
+++++KL S + T ++ +V+ Q + G+ +D E++LIV+CN ++ +I++E
Sbjct: 30 IESIAKLNNSNKLTSLLTRVKN--QMIKSLPEKGVKTGQDSEEHKLIVECNQMAQEIQHE 87
Query: 79 IVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVS 138
I +IH F+R++Y KFPELES V +P+DY VK+I NE DL V L LLP + IMV+
Sbjct: 88 IYLIHKFVRERYSKKFPELESSVQNPLDYINCVKRIKNENDLINVQLNDLLPKSTIMVLL 147
Query: 139 VTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVA 198
VT S+T+GK L ++ L + I ++ESRM+YIAPNLS ++GS++A
Sbjct: 148 VTLSSTAGKNLTQEELMRVIDACDMGLELDLHKKNILHYLESRMTYIAPNLSVLMGSSIA 207
Query: 199 AKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQ-FRVGYLEQTEIFQSTPPPL 257
+KL+G AG + LA +PA ++Q LGA KK LAGFS +++ F++G + Q +I + PP L
Sbjct: 208 SKLIGIAGSIQQLANIPAGHLQTLGADKKALAGFSGMSNRKFQMGLISQCDIVKKAPPFL 267
Query: 258 RMRACRLLAAKSTLAARVDSTRGDPS--GTAGRSFREEIHKKIEKWQE 303
+++A R L + ++AARVD+ + D S G GR +R+EI KIEKWQE
Sbjct: 268 QVKALRTLTGRVSIAARVDAQQ-DSSFYGETGRQYRDEILAKIEKWQE 314
>UNIPROTKB|E7EN72 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PANTHER:PTHR13904 IPI:IPI00167198 HGNC:HGNC:15446
ProteinModelPortal:E7EN72 SMR:E7EN72 PRIDE:E7EN72
Ensembl:ENST00000445811 ArrayExpress:E7EN72 Bgee:E7EN72
Uniprot:E7EN72
Length = 284
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 113/242 (46%), Positives = 159/242 (65%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
L+ D + ++KL S+ F +IM K+E + + S +E PEY++IVD N L+V+
Sbjct: 43 LSGDSVKTIAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVE 102
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSA 132
IENE+ IIH FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A
Sbjct: 103 IENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNA 162
Query: 133 IIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAI 192
IMVVSVTASTT G+ L E+ L++ +VESRMS+IAPNLS I
Sbjct: 163 TIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSII 222
Query: 193 VGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQS 252
+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+GFS+ + GY+ ++I QS
Sbjct: 223 IGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQS 282
Query: 253 TP 254
P
Sbjct: 283 LP 284
>WB|WBGene00022458 [details] [associations]
symbol:prp-31 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR027105 Pfam:PF01798
GO:GO:0009792 GO:GO:0002009 GO:GO:0016477 GO:GO:0008406
GO:GO:0018996 GO:GO:0042127 EMBL:FO080728 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 GO:GO:0001703 eggNOG:COG1498
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075069 KO:K12844 OMA:VESDPEY
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 RefSeq:NP_491527.1 ProteinModelPortal:Q9N592
SMR:Q9N592 STRING:Q9N592 PaxDb:Q9N592 EnsemblMetazoa:Y110A7A.8
GeneID:172146 KEGG:cel:CELE_Y110A7A.8 UCSC:Y110A7A.8.2 CTD:172146
WormBase:Y110A7A.8 InParanoid:Q9N592 NextBio:874215 Uniprot:Q9N592
Length = 504
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 115/289 (39%), Positives = 169/289 (58%)
Query: 17 YDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIE 76
Y + +V+KL +S + +++++E L+ D LE DP+Y+LIV + ++ DI+
Sbjct: 54 YASVHDVAKLARSDEYLALVKQLEVELKRPQDEVKVTAPLEADPQYKLIVKLSHVAADID 113
Query: 77 NEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLV--DLEGLLPSAII 134
NEI +IH F+RDKY +FPELE+LV + + Y V+ +GNE++ +V L G+L ++
Sbjct: 114 NEINVIHKFVRDKYEKRFPELETLVPNALTYLATVQLLGNEINSKVVKEQLGGILDASTC 173
Query: 135 MVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVG 194
MVVSVT STT G L + L+ + VE RM+ IAPNL A++G
Sbjct: 174 MVVSVTVSTTQGVKLEPNELETVMDACNLAAQLHVNRLEMHQLVEWRMALIAPNLVALLG 233
Query: 195 SAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTP 254
S A L+ AGGLS LA MP+CNVQ+LG KKNL GFST ++ G++ ++ Q P
Sbjct: 234 STTTAHLVSQAGGLSPLATMPSCNVQVLGKTKKNLIGFSTVSTNPHHGFIYFHQLVQKMP 293
Query: 255 PPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
P L+ +A ++LAAK TL AR+D+ +G G F + K EK E
Sbjct: 294 PDLKNKAAKILAAKVTLVARIDAQHESSNGEKGAEFLALVESKFEKMLE 342
>POMBASE|SPBC119.13c [details] [associations]
symbol:prp31 "U4/U6 x U5 tri-snRNP complex subunit
Prp31" species:4896 "Schizosaccharomyces pombe" [GO:0000244
"assembly of spliceosomal tri-snRNP" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0007126
"meiosis" evidence=NAS] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] InterPro:IPR027105 PomBase:SPBC119.13c
Pfam:PF01798 GO:GO:0007126 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0005681 GO:GO:0000244 GO:GO:0003723 GO:GO:0046540
GO:GO:0045292 eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 PIR:T39311 RefSeq:NP_595294.1
ProteinModelPortal:O42904 IntAct:O42904 STRING:O42904
EnsemblFungi:SPBC119.13c.1 GeneID:2540045 KEGG:spo:SPBC119.13c
OMA:RDHYSIR OrthoDB:EOG4ZCXDV NextBio:20801182 Uniprot:O42904
Length = 518
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 113/286 (39%), Positives = 170/286 (59%)
Query: 18 DDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIEN 77
D+ +N+ +L S R DI++ E G++ +EDD EY LIVD N ++++I++
Sbjct: 75 DNNENIYQLLNSTRLRDIIEGTEK--YKGTEKQAITGNIEDDLEYHLIVDSNSIAMEIDD 132
Query: 78 EIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVV 137
EI+ +H +++ Y +FPEL SLV + DY + V + N++D + L LPSA +MV+
Sbjct: 133 EILRLHRLVKEWYHDRFPELSSLVLNAFDYCKTVSSLLNDLDNSKTKLS-FLPSATVMVI 191
Query: 138 SVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAV 197
+ TA+TT GKPLP+++++ +V+SR+S +APNLSA+VGS
Sbjct: 192 ATTATTTVGKPLPDEMIKNVKNCCEAIQQLGEEKQKIIEYVQSRISVVAPNLSAVVGSTT 251
Query: 198 AAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPL 257
AA L+G AGGL+ L K PACN+ LG ++ G + G+L +EI Q TPP +
Sbjct: 252 AANLIGIAGGLTRLGKFPACNLPALGKRRLTTIGINNPAVSGDYGFLYMSEIVQKTPPDV 311
Query: 258 RMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
R +A R+ AAK LAAR+DS P G+ G S R+E+ +KIEK E
Sbjct: 312 RKQAIRMTAAKVALAARIDSIHEYPDGSFGISARKEVERKIEKLLE 357
>UNIPROTKB|E7ESX0 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PANTHER:PTHR13904 HGNC:HGNC:15446 IPI:IPI00657783
ProteinModelPortal:E7ESX0 SMR:E7ESX0 PRIDE:E7ESX0
Ensembl:ENST00000445124 ArrayExpress:E7ESX0 Bgee:E7ESX0
Uniprot:E7ESX0
Length = 276
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 109/232 (46%), Positives = 153/232 (65%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
L+ D + ++KL S+ F +IM K+E + + S +E PEY++IVD N L+V+
Sbjct: 43 LSGDSVKTIAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVE 102
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSA 132
IENE+ IIH FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A
Sbjct: 103 IENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNA 162
Query: 133 IIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAI 192
IMVVSVTASTT G+ L E+ L++ +VESRMS+IAPNLS I
Sbjct: 163 TIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSII 222
Query: 193 VGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYL 244
+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+GFS+ + GY+
Sbjct: 223 IGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYI 274
>UNIPROTKB|E7EU94 [details] [associations]
symbol:PRPF31 "U4/U6 small nuclear ribonucleoprotein Prp31"
species:9606 "Homo sapiens" [GO:0000244 "assembly of spliceosomal
tri-snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:AC012314
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
PANTHER:PTHR13904 HGNC:HGNC:15446 IPI:IPI00657750
ProteinModelPortal:E7EU94 SMR:E7EU94 PRIDE:E7EU94
Ensembl:ENST00000447810 ArrayExpress:E7EU94 Bgee:E7EU94
Uniprot:E7EU94
Length = 261
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 105/219 (47%), Positives = 146/219 (66%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
L+ D + ++KL S+ F +IM K+E + + S +E PEY++IVD N L+V+
Sbjct: 43 LSGDSVKTIAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVE 102
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSA 132
IENE+ IIH FIRDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A
Sbjct: 103 IENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNA 162
Query: 133 IIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAI 192
IMVVSVTASTT G+ L E+ L++ +VESRMS+IAPNLS I
Sbjct: 163 TIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSII 222
Query: 193 VGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAG 231
+G++ AAK+MG AGGL+ L+KMPACN+ LLGA++K L+G
Sbjct: 223 IGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSG 261
>TAIR|locus:2016134 [details] [associations]
symbol:AT1G70400 "AT1G70400" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR027105 EMBL:CP002684 InterPro:IPR012976
Pfam:PF08060 SMART:SM00931 PANTHER:PTHR13904 IPI:IPI00938699
RefSeq:NP_001154463.1 UniGene:At.50883 ProteinModelPortal:F4I5F1
SMR:F4I5F1 EnsemblPlants:AT1G70400.3 GeneID:843376
KEGG:ath:AT1G70400 ArrayExpress:F4I5F1 Uniprot:F4I5F1
Length = 274
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 102/144 (70%), Positives = 113/144 (78%)
Query: 15 LNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVD 74
L YDDLD+VSKLQKS+R+ DIMQ+VE AL+ G VLE +LIVDC L VD
Sbjct: 9 LTYDDLDSVSKLQKSRRYADIMQQVEEALE--------GSVLEYK---KLIVDCKQLLVD 57
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAII 134
IENEIVI+ NFIRDKYR+KF ELE LV HPIDYARVVK+IGNEMDL LVDLEGLLPSA+I
Sbjct: 58 IENEIVIVQNFIRDKYRVKFQELELLVPHPIDYARVVKRIGNEMDLKLVDLEGLLPSAMI 117
Query: 135 MVVSVTASTTSGKPLPEDVLQKTI 158
MV+ VTA TT G LPEDVL KTI
Sbjct: 118 MVLLVTALTTKGNQLPEDVLLKTI 141
>GENEDB_PFALCIPARUM|PFD0450c [details] [associations]
symbol:PFD0450c "pre-mrna splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380
GO:GO:0005681 EMBL:AL844503 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 KO:K12844 InterPro:IPR019175
PANTHER:PTHR13904 Pfam:PF09785 HOGENOM:HOG000207983
RefSeq:XP_002808648.1 EnsemblProtists:PFD0450c:mRNA GeneID:812409
KEGG:pfa:PFD0450c EuPathDB:PlasmoDB:PF3D7_0409100
ProtClustDB:CLSZ2433500 Uniprot:C0H4A0
Length = 534
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 89/289 (30%), Positives = 161/289 (55%)
Query: 16 NYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVD-CNVLSVD 74
N D + + L K ++ ++ + ++ N ++ +N+ ED+ ++++ C +
Sbjct: 106 NVDGDEEIEVLLK-EKDSNKINNIDNDKFNNNNNNNNSSSDEDNFYDDVMIEKCMETILK 164
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAII 134
I+ EI+ IH +++D Y KFPEL+S+V+ P++Y VV KI NE+DL +D +LP+ +
Sbjct: 165 IDTEILNIHKYVKDIYSTKFPELDSIVYSPVEYISVVNKIRNEVDLKNIDFSDILPNTTV 224
Query: 135 MVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVG 194
M ++V +S T+G LP+++L+ I ++ES+M Y+APN++ ++G
Sbjct: 225 MAITVASSMTTGICLPDNLLKNCISFCNEGIQLNEYRNIILLYLESKMFYLAPNVTMLLG 284
Query: 195 SAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTP 254
S++ A+L+ G L L+ + + N+ ++ + KK+L G S +G L +EI QS P
Sbjct: 285 SSLTARLISAVGSLKNLSIISSQNLIVIASTKKSLFGLSNVHKTLGIGILCCSEIVQSVP 344
Query: 255 PPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
+ +A LLA+K +LAAR+D + G G R+ I + K QE
Sbjct: 345 DAYKKKAISLLASKCSLAARIDYFKKYKEGQYGLLLRQYIISHLIKLQE 393
>UNIPROTKB|C0H4A0 [details] [associations]
symbol:PFD0450c "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR027105 Pfam:PF01798 GO:GO:0008380 GO:GO:0005681
EMBL:AL844503 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
SMART:SM00931 KO:K12844 InterPro:IPR019175 PANTHER:PTHR13904
Pfam:PF09785 HOGENOM:HOG000207983 RefSeq:XP_002808648.1
EnsemblProtists:PFD0450c:mRNA GeneID:812409 KEGG:pfa:PFD0450c
EuPathDB:PlasmoDB:PF3D7_0409100 ProtClustDB:CLSZ2433500
Uniprot:C0H4A0
Length = 534
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 89/289 (30%), Positives = 161/289 (55%)
Query: 16 NYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVD-CNVLSVD 74
N D + + L K ++ ++ + ++ N ++ +N+ ED+ ++++ C +
Sbjct: 106 NVDGDEEIEVLLK-EKDSNKINNIDNDKFNNNNNNNNSSSDEDNFYDDVMIEKCMETILK 164
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAII 134
I+ EI+ IH +++D Y KFPEL+S+V+ P++Y VV KI NE+DL +D +LP+ +
Sbjct: 165 IDTEILNIHKYVKDIYSTKFPELDSIVYSPVEYISVVNKIRNEVDLKNIDFSDILPNTTV 224
Query: 135 MVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVG 194
M ++V +S T+G LP+++L+ I ++ES+M Y+APN++ ++G
Sbjct: 225 MAITVASSMTTGICLPDNLLKNCISFCNEGIQLNEYRNIILLYLESKMFYLAPNVTMLLG 284
Query: 195 SAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTP 254
S++ A+L+ G L L+ + + N+ ++ + KK+L G S +G L +EI QS P
Sbjct: 285 SSLTARLISAVGSLKNLSIISSQNLIVIASTKKSLFGLSNVHKTLGIGILCCSEIVQSVP 344
Query: 255 PPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
+ +A LLA+K +LAAR+D + G G R+ I + K QE
Sbjct: 345 DAYKKKAISLLASKCSLAARIDYFKKYKEGQYGLLLRQYIISHLIKLQE 393
>RGD|1305832 [details] [associations]
symbol:Prpf31 "PRP31 pre-mRNA processing factor 31 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000244
"assembly of spliceosomal tri-snRNP" evidence=IEA;ISO] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005687 "U4 snRNP" evidence=ISO]
[GO:0015030 "Cajal body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=ISO] [GO:0043021 "ribonucleoprotein complex binding"
evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA;ISO] [GO:0070990 "snRNP binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR027105
Pfam:PF01798 RGD:1305832 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 PANTHER:PTHR13904 EMBL:AC103574
IPI:IPI00948419 Ensembl:ENSRNOT00000064433 UCSC:RGD:1305832
ArrayExpress:F1M5K0 Uniprot:F1M5K0
Length = 195
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 82/179 (45%), Positives = 114/179 (63%)
Query: 27 QKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFI 86
Q+ F +IM K+E + + S +E PEY++IVD N L+V+IENE+ IIH FI
Sbjct: 3 QQDGEFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFI 62
Query: 87 RDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTL--VDLEGLLPSAIIMVVSVTASTT 144
RDKY +FPELESLV + +DY R VK++GN +D +L+ +L +A IMVVSVTASTT
Sbjct: 63 RDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTT 122
Query: 145 SGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMG 203
G+ L ++ L++ +VESRMS+IAPNLS I+G++ AAK+MG
Sbjct: 123 QGQQLSDEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMG 181
>ASPGD|ASPL0000059636 [details] [associations]
symbol:AN1260 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR027105 Pfam:PF01798 EMBL:BN001308
EMBL:AACD01000017 eggNOG:COG1498 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785
HOGENOM:HOG000207983 OMA:RDHYSIR OrthoDB:EOG4ZCXDV
RefSeq:XP_658864.1 ProteinModelPortal:Q5BDX0 STRING:Q5BDX0
EnsemblFungi:CADANIAT00001363 GeneID:2877039 KEGG:ani:AN1260.2
Uniprot:Q5BDX0
Length = 521
Score = 356 (130.4 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 80/245 (32%), Positives = 134/245 (54%)
Query: 71 LSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVV-----------KKIGNEMD 119
+++ +E+ +H +RD Y ++FPELE+LV + IDYA+ V K + D
Sbjct: 49 VALSTADELTRLHKSLRDHYSIRFPELETLVTNSIDYAKTVAILKNGPLTDIKALSTSAD 108
Query: 120 -LTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFV 178
+ V L+ +L +MVV+V +TT G+ + E L+ + +
Sbjct: 109 NMVGVPLKSILDGPTLMVVAVEGTTTRGREMTEAELKVVMDTCERILKLDRERTALTQSI 168
Query: 179 ESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQ 238
++ M+ IAPNL+A+VG AA+ + GGL LAK+PACN+ G+K+K+ GF+T TS
Sbjct: 169 QANMNQIAPNLAALVGPETAAQFLNQTGGLRELAKIPACNLGAQGSKRKDGLGFATNTSI 228
Query: 239 FRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKI 298
G+L +E+ Q P L+ +A R+++AK LA R D ++ P G+ G +++ +++
Sbjct: 229 RSQGFLYNSELIQDIPNDLKRQAIRIVSAKMVLAVRADVSKYSPDGSLGEDLKQQCFQRL 288
Query: 299 EKWQE 303
EK E
Sbjct: 289 EKLTE 293
>POMBASE|SPAC23G3.06 [details] [associations]
symbol:SPAC23G3.06 "U3 snoRNP protein Nop58 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0030515 "snoRNA binding"
evidence=ISM] [GO:0032040 "small-subunit processome" evidence=ISO]
PomBase:SPAC23G3.06 Pfam:PF01798 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0030515 GO:GO:0006364 GO:GO:0032040
eggNOG:COG1498 HOGENOM:HOG000196309 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 KO:K14565 OrthoDB:EOG4BZRB2
PIR:T50180 RefSeq:NP_593106.1 ProteinModelPortal:Q9P7S7
IntAct:Q9P7S7 STRING:Q9P7S7 EnsemblFungi:SPAC23G3.06.1
GeneID:2541814 KEGG:spo:SPAC23G3.06 OMA:SHILARY NextBio:20802902
Uniprot:Q9P7S7
Length = 508
Score = 269 (99.8 bits), Expect = 9.9e-23, P = 9.9e-23
Identities = 68/252 (26%), Positives = 112/252 (44%)
Query: 49 ISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYA 108
+S H + D +IV L D++ E+ +R+ Y FPE+ ++ + YA
Sbjct: 147 LSRHKLKFSPDKVDTMIVQAIALLDDLDKELNTYAMRVREWYGWHFPEMGKIIQDNLAYA 206
Query: 109 RVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXX 168
RV+K +G + D +LP I + A + G + E+ L +
Sbjct: 207 RVIKAMGMRTKCSETDFSDILPEEIEATLKSAAEISMGTEITEEDLDNIVMLADQVLELA 266
Query: 169 XXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKN 228
++ +RM IAPNL+A+VG V A+L+ AG L LAK PA +Q+LGA+K
Sbjct: 267 SYRAQLSEYLRNRMQAIAPNLTALVGELVGARLIAHAGSLMNLAKQPASTIQILGAEKAL 326
Query: 229 LAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVD--STRGDPSGTA 286
T S + G + + + + R+LA K+ L+ RVD S + +G
Sbjct: 327 FRALKTKHSTPKYGLIYHASLVGQANSKNKGKIARVLATKAALSLRVDALSDKDTTNGNI 386
Query: 287 GRSFREEIHKKI 298
G R + ++
Sbjct: 387 GLENRIRVENRL 398
>SGD|S000003323 [details] [associations]
symbol:PRP31 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000387 "spliceosomal snRNP assembly" evidence=IMP;IDA]
[GO:0046540 "U4/U6 x U5 tri-snRNP complex" evidence=IEA;IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IPI]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR027105
SGD:S000003323 Pfam:PF01798 GO:GO:0005739 EMBL:BK006941
GO:GO:0005681 GO:GO:0003723 GO:GO:0000387 GO:GO:0046540
eggNOG:COG1498 InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060
PROSITE:PS51358 GeneTree:ENSGT00550000075069 KO:K12844
InterPro:IPR019175 PANTHER:PTHR13904 Pfam:PF09785 OrthoDB:EOG4ZCXDV
EMBL:U31970 EMBL:Z72876 EMBL:AY723814 PIR:S64386 RefSeq:NP_011605.1
ProteinModelPortal:P49704 SMR:P49704 DIP:DIP-5355N IntAct:P49704
MINT:MINT-493013 STRING:P49704 PaxDb:P49704 EnsemblFungi:YGR091W
GeneID:852983 KEGG:sce:YGR091W CYGD:YGR091w HOGENOM:HOG000000957
OMA:HRISEAN NextBio:972794 Genevestigator:P49704 GermOnline:YGR091W
Uniprot:P49704
Length = 494
Score = 266 (98.7 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 73/243 (30%), Positives = 125/243 (51%)
Query: 75 IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNE------MDLTLVDLEGL 128
I++ I ++HNF+ Y +FPEL SL+ P+ Y++V+ + NE D LE
Sbjct: 105 IKSNIKLMHNFLISLYSRRFPELSSLIPSPLQYSKVISILENENYSKNESDELFFHLENK 164
Query: 129 --LPSAIIMVVSVTASTTSGKPLPEDVLQKT--IXXXXXXXXXXXXXXXXXXFVESRMSY 184
L I+V++++ T+ P D+ +T + ++ S++S
Sbjct: 165 AKLTREQILVLTMSMKTSFKNKEPLDIKTRTQILEANSILENLWKLQEDIGQYIASKISI 224
Query: 185 IAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAG-FSTATSQFRV-G 242
IAPN+ +VG +AA+L+ AGG+ +++P+CN+ +G K K+L+ T S R G
Sbjct: 225 IAPNVCFLVGPEIAAQLIAHAGGVLEFSRIPSCNIASIG-KNKHLSHELHTLESGVRQEG 283
Query: 243 YLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTR--GDPSGTAGRSFREEIHKKIEK 300
YL +++ Q P + + R+L AK +LAARVD+ + GD + ++ E+ KK K
Sbjct: 284 YLFASDMIQKFPVSVHKQMLRMLCAKVSLAARVDAGQKNGDRNTVLAHKWKAELSKKARK 343
Query: 301 WQE 303
E
Sbjct: 344 LSE 346
>UNIPROTKB|Q58105 [details] [associations]
symbol:MJ0694 "Uncharacterized NOP5 family protein MJ0694"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0005515
"protein binding" evidence=IPI] Pfam:PF01798 EMBL:L77117
GenomeReviews:L77117_GR eggNOG:COG1498 KO:K14564 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358
PIR:F64386 RefSeq:NP_247678.1 PDB:3T7Z PDBsum:3T7Z
ProteinModelPortal:Q58105 IntAct:Q58105 GeneID:1451561
KEGG:mja:MJ_0694 OMA:KYPNPPK ProtClustDB:PRK14552 Uniprot:Q58105
Length = 414
Score = 255 (94.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 66/228 (28%), Positives = 113/228 (49%)
Query: 74 DIENEIVIIHNFIRDKYRLKFPELESLVH-HPIDYARVVKKIGNEMDLTLVDLEGLLPSA 132
D++ + ++ +R+ Y L FPEL+ LV+ H + YA ++ K+G + T L+ +LPS
Sbjct: 135 DLDKTLNLLSERLREWYSLYFPELDHLVNKHEV-YANLITKLGKRKNFTKSQLKKILPSK 193
Query: 133 IIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAI 192
+ ++ A + G L + L + ++E M+ APN++ +
Sbjct: 194 LAGKIAEAAKNSMGGELEDYDLDVIVKFAEEINHLYEKRKELYNYLEKLMNEEAPNITKL 253
Query: 193 VGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQS 252
G ++ A+L+G AGGL LAKMPA +Q+LGA+K A + G + + Q
Sbjct: 254 AGVSLGARLIGLAGGLEKLAKMPASTIQVLGAEKALFAHLRMGVEPPKHGIIYNHPLIQG 313
Query: 253 TPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEK 300
+P R + R LA K +AAR D GD E+++K++E+
Sbjct: 314 SPHWQRGKIARALACKLAIAARADYV-GD---YIADELLEKLNKRVEE 357
>UNIPROTKB|E1BUS2 [details] [associations]
symbol:NOP58 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0070761 "pre-snoRNP complex" evidence=IEA]
Pfam:PF01798 GO:GO:0005737 GO:GO:0030515 GO:GO:0015030
GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
KO:K14565 CTD:51602 OMA:DAHEQLA GeneTree:ENSGT00550000074998
EMBL:AADN02019867 EMBL:AADN02019868 IPI:IPI00582637
RefSeq:XP_421942.1 UniGene:Gga.12235 PRIDE:E1BUS2
Ensembl:ENSGALT00000013776 GeneID:424087 KEGG:gga:424087
NextBio:20826466 Uniprot:E1BUS2
Length = 527
Score = 258 (95.9 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 70/258 (27%), Positives = 117/258 (45%)
Query: 49 ISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFI---RDKYRLKFPELESLVHHPI 105
+S + + D +IV L D++ E+ +N+I R+ Y FPEL ++ +
Sbjct: 147 LSRYKLKFSPDKVDTMIVQAISLLDDLDKEL---NNYIMRCREWYGWHFPELGKIITDNL 203
Query: 106 DYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXX 165
Y + V+K+G+ + D+ +LP I V A + G + E+ + I
Sbjct: 204 TYCKCVRKVGDRRNFASSDVSDILPEEIEEDVKAAAEISMGTEVSEEDINNIIHLCDQVI 263
Query: 166 XXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAK 225
++++RM IAPNL+ +VG V A+L+ AG L LAK PA VQ+LGA+
Sbjct: 264 EISEYRTQLYDYLKNRMMAIAPNLTVMVGELVGARLIAHAGSLLNLAKHPASTVQILGAE 323
Query: 226 KKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGT 285
K T + G + + T + + R+LAAK+ L R D+ D S
Sbjct: 324 KALFRALKTKRDTPKFGLIYHASLVGQTTAKNKGKISRMLAAKTALTIRYDALGEDTSAE 383
Query: 286 AGRSFREEIHKKIEKWQE 303
G R ++ ++ +E
Sbjct: 384 MGAENRLKVETRLRHLEE 401
>UNIPROTKB|Q97ZH3 [details] [associations]
symbol:SSO0939 "Pre mRNA splicing protein" species:273057
"Sulfolobus solfataricus P2" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF01798 EMBL:AE006641 GenomeReviews:AE006641_GR
PDB:3ID5 PDB:3ID6 PDB:3PLA PDBsum:3ID5 PDBsum:3ID6 PDBsum:3PLA
eggNOG:COG1498 KO:K14564 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08060 SMART:SM00931 ProtClustDB:PRK14552 PIR:H90244
RefSeq:NP_342425.1 PDB:3ICX PDBsum:3ICX ProteinModelPortal:Q97ZH3
DIP:DIP-48938N IntAct:Q97ZH3 GeneID:1455182 KEGG:sso:SSO0939
HOGENOM:HOG000227188 OMA:FLPASTI EvolutionaryTrace:Q97ZH3
Uniprot:Q97ZH3
Length = 412
Score = 252 (93.8 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 69/232 (29%), Positives = 112/232 (48%)
Query: 74 DIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLE--GLLPS 131
DI+ I + +R+ Y + FPEL+ L+ +YA +V + G+ LT+ L+ G
Sbjct: 149 DIDKTINLFSERLREWYSIHFPELDKLIEDHEEYATIVSRFGDRGFLTIDSLKELGFNEQ 208
Query: 132 AIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSA 191
I ++ A + G + ED L ++E M +APN++A
Sbjct: 209 RINRILDA-AKKSIGADISEDDLSAMRMIANTILDLYNIRRNLNNYLEGVMKEVAPNVTA 267
Query: 192 IVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQ 251
+VG A+ A+L+ AG L LAKMPA +Q+LGA+K + + G + Q
Sbjct: 268 LVGPALGARLLSIAGSLDELAKMPASTIQVLGAEKALFRALRSGGRPPKHGIIFQYPAIH 327
Query: 252 STPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303
++P R + R LAAK +AARVD+ G G E++ K+I++ +E
Sbjct: 328 TSPRWQRGKIARALAAKLAIAARVDAFSGR---FIGDQLNEQLKKRIDEIKE 376
>ASPGD|ASPL0000037939 [details] [associations]
symbol:nop58 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0031428 "box C/D
snoRNP complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
Pfam:PF01798 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0030686
GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0031428 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 KO:K14565 RefSeq:XP_660771.1
ProteinModelPortal:Q5B8G3 STRING:Q5B8G3
EnsemblFungi:CADANIAT00009903 GeneID:2873782 KEGG:ani:AN3167.2
HOGENOM:HOG000196310 OMA:LNDNIAY OrthoDB:EOG4BZRB2 Uniprot:Q5B8G3
Length = 586
Score = 256 (95.2 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 65/229 (28%), Positives = 108/229 (47%)
Query: 49 ISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYA 108
++ H + D +IV L D++ E+ +++ Y FPEL +++ I Y+
Sbjct: 149 LARHKLKFSPDKIDTMIVQAIGLLDDLDKELNNYAMRVKEWYGWHFPELAKILNDNIAYS 208
Query: 109 RVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXX 168
R+V K+G + DL +LP I V A + G + ED L+
Sbjct: 209 RLVLKMGMRSNFENADLAEILPEEIEAAVKAAADRSMGTEISEDDLENIQALAEQVVGFS 268
Query: 169 XXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKN 228
++ +RM+ IAPNL+A+VG V A+L+ AG L+ L+K PA +Q+LGA+K
Sbjct: 269 EYRSQLAGYITARMNAIAPNLTALVGDLVGARLIAHAGSLTNLSKSPASTLQILGAEKAL 328
Query: 229 LAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDS 277
T + G + + + + R+LAAK++L RVD+
Sbjct: 329 FRALKTKHDTPKYGLIYHASLIGQATGKNKGKMARVLAAKASLGLRVDA 377
>WB|WBGene00020915 [details] [associations]
symbol:nol-5 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040019 "positive
regulation of embryonic development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] Pfam:PF01798
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040035 GO:GO:0040019 GO:GO:0040027
eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
KO:K14565 HOGENOM:HOG000196310 OMA:DAHEQLA
GeneTree:ENSGT00550000074998 EMBL:FO081759 PIR:T32941
RefSeq:NP_491134.1 HSSP:O28191 ProteinModelPortal:O45012 SMR:O45012
STRING:O45012 PaxDb:O45012 EnsemblMetazoa:W01B11.3.1
EnsemblMetazoa:W01B11.3.2 EnsemblMetazoa:W01B11.3.3 GeneID:171901
KEGG:cel:CELE_W01B11.3 UCSC:W01B11.3 CTD:171901 WormBase:W01B11.3
InParanoid:O45012 NextBio:873175 Uniprot:O45012
Length = 487
Score = 246 (91.7 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 63/222 (28%), Positives = 104/222 (46%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLV 123
+IV L D++ E+ +R+ Y FPEL + YA+++K IG +
Sbjct: 159 MIVQAVSLLDDLDKELNNYVMRVREWYGWHFPELGKTIQDHQAYAKIIKAIGMRQNCINT 218
Query: 124 DLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMS 183
DL +LP + V A + G + + L ++++RM+
Sbjct: 219 DLSSILPEELEEKVKEDAEISMGTDISDIDLIHIKGLCDQVIELSAYRAQLFDYLKNRMT 278
Query: 184 YIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGY 243
+APNL+ ++G V A+L+ AG L +LAK PA +Q+LGA+K T + G
Sbjct: 279 ALAPNLTVLLGELVGARLISHAGSLVSLAKAPASTIQILGAEKALFRALKTKKDTPKYGL 338
Query: 244 LEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGT 285
+ ++ PP ++ + R LAAK +LA R+D+ D S T
Sbjct: 339 IYHAQLITQAPPKVKGKMARKLAAKCSLATRIDAL-SDESAT 379
>UNIPROTKB|I3LDD2 [details] [associations]
symbol:NOP58 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070761 "pre-snoRNP complex" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=IEA]
Pfam:PF01798 GO:GO:0005737 GO:GO:0030515 GO:GO:0015030
GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
OMA:DAHEQLA GeneTree:ENSGT00550000074998 EMBL:CU466450
Ensembl:ENSSSCT00000029321 Uniprot:I3LDD2
Length = 416
Score = 243 (90.6 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 66/258 (25%), Positives = 117/258 (45%)
Query: 49 ISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFI---RDKYRLKFPELESLVHHPI 105
+S + + D +IV L D++ E+ +N+I R+ Y FPEL ++ +
Sbjct: 146 LSRYRLKFSADKVDTMIVQAISLLDDLDKEL---NNYIMRCREWYGWHFPELGKIISDNL 202
Query: 106 DYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXX 165
Y + ++K+G+ + L LLP + V A + G + E+ + +
Sbjct: 203 TYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVI 262
Query: 166 XXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAK 225
++++RM IAPN++ +VG V A+L+ AG L LAK A VQ+LGA+
Sbjct: 263 EISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAE 322
Query: 226 KKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGT 285
K + + G + + T P + + R+LAAK+ LA R D+ D S
Sbjct: 323 KALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSA 382
Query: 286 AGRSFREEIHKKIEKWQE 303
G R ++ ++ ++
Sbjct: 383 MGVENRAKLEARLRTLED 400
>UNIPROTKB|F1N218 [details] [associations]
symbol:NOP58 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070761 "pre-snoRNP complex" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=IEA]
Pfam:PF01798 GO:GO:0005737 GO:GO:0030515 GO:GO:0015030
GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
KO:K14565 CTD:51602 OMA:DAHEQLA GeneTree:ENSGT00550000074998
EMBL:DAAA02005606 EMBL:DAAA02005607 IPI:IPI00711083
RefSeq:NP_001179886.1 UniGene:Bt.45900 PRIDE:F1N218
Ensembl:ENSBTAT00000007254 GeneID:507155 KEGG:bta:507155
NextBio:20867927 Uniprot:F1N218
Length = 529
Score = 244 (91.0 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 66/258 (25%), Positives = 117/258 (45%)
Query: 49 ISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFI---RDKYRLKFPELESLVHHPI 105
+S + + D +IV L D++ E+ +N+I R+ Y FPEL ++ +
Sbjct: 146 LSRYRLKFSADKVDTMIVQAISLLDDLDKEL---NNYIMRCREWYGWHFPELGKIISDNL 202
Query: 106 DYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXX 165
Y + ++K+G+ + L LLP + V A + G + E+ + +
Sbjct: 203 TYCKCLQKVGDRKNYASAQLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVI 262
Query: 166 XXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAK 225
++++RM IAPN++ +VG V A+L+ AG L LAK A VQ+LGA+
Sbjct: 263 EISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAE 322
Query: 226 KKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGT 285
K + + G + + T P + + R+LAAK+ LA R D+ D S
Sbjct: 323 KALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSA 382
Query: 286 AGRSFREEIHKKIEKWQE 303
G R ++ ++ ++
Sbjct: 383 MGVENRAKLEARLRTLED 400
>UNIPROTKB|Q9Y2X3 [details] [associations]
symbol:NOP58 "Nucleolar protein 58" species:9606 "Homo
sapiens" [GO:0005730 "nucleolus" evidence=IDA;TAS] [GO:0016049
"cell growth" evidence=TAS] [GO:0006364 "rRNA processing"
evidence=TAS] [GO:0006608 "snRNP protein import into nucleus"
evidence=ISS] [GO:0030515 "snoRNA binding" evidence=IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=IDA] [GO:0031428 "box C/D snoRNP complex" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070761 "pre-snoRNP
complex" evidence=IDA] [GO:0015030 "Cajal body" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Pfam:PF01798 GO:GO:0005737 GO:GO:0016049
GO:GO:0030515 GO:GO:0015030 GO:GO:0070761 GO:GO:0006364
EMBL:AC064836 GO:GO:0031428 eggNOG:COG1498 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310
EMBL:AF123534 EMBL:AF263608 EMBL:BC032592 EMBL:BC009306
EMBL:AL117554 EMBL:AF161469 IPI:IPI00006379 PIR:T17299
RefSeq:NP_057018.1 UniGene:Hs.471104 ProteinModelPortal:Q9Y2X3
SMR:Q9Y2X3 IntAct:Q9Y2X3 STRING:Q9Y2X3 PhosphoSite:Q9Y2X3
DMDM:17380155 SWISS-2DPAGE:Q9Y2X3 PaxDb:Q9Y2X3 PeptideAtlas:Q9Y2X3
PRIDE:Q9Y2X3 DNASU:51602 Ensembl:ENST00000264279 GeneID:51602
KEGG:hsa:51602 UCSC:uc002uzb.3 CTD:51602 GeneCards:GC02P203130
HGNC:HGNC:29926 HPA:HPA018472 HPA:HPA021062 neXtProt:NX_Q9Y2X3
PharmGKB:PA164724092 InParanoid:Q9Y2X3 OMA:DAHEQLA
OrthoDB:EOG451DQQ PhylomeDB:Q9Y2X3 ChiTaRS:NOP58 GenomeRNAi:51602
NextBio:55479 ArrayExpress:Q9Y2X3 Bgee:Q9Y2X3 Genevestigator:Q9Y2X3
GermOnline:ENSG00000055044 GO:GO:0006608 Uniprot:Q9Y2X3
Length = 529
Score = 243 (90.6 bits), Expect = 7.8e-20, P = 7.8e-20
Identities = 66/258 (25%), Positives = 117/258 (45%)
Query: 49 ISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFI---RDKYRLKFPELESLVHHPI 105
+S + + D +IV L D++ E+ +N+I R+ Y FPEL ++ +
Sbjct: 146 LSRYRLKFSADKVDTMIVQAISLLDDLDKEL---NNYIMRCREWYGWHFPELGKIISDNL 202
Query: 106 DYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXX 165
Y + ++K+G+ + L LLP + V A + G + E+ + +
Sbjct: 203 TYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVI 262
Query: 166 XXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAK 225
++++RM IAPN++ +VG V A+L+ AG L LAK A VQ+LGA+
Sbjct: 263 EISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAE 322
Query: 226 KKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGT 285
K + + G + + T P + + R+LAAK+ LA R D+ D S
Sbjct: 323 KALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSA 382
Query: 286 AGRSFREEIHKKIEKWQE 303
G R ++ ++ ++
Sbjct: 383 MGVENRAKLEARLRTLED 400
>DICTYBASE|DDB_G0268098 [details] [associations]
symbol:nop58 "nucleolar protein 58" species:44689
"Dictyostelium discoideum" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0268098 Pfam:PF01798
GenomeReviews:CM000150_GR GO:GO:0005730 EMBL:AAFI02000003
GO:GO:0042254 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 RefSeq:XP_647549.1 ProteinModelPortal:Q55FI4
STRING:Q55FI4 PRIDE:Q55FI4 EnsemblProtists:DDB0305289
GeneID:8616357 KEGG:ddi:DDB_G0268098 KO:K14565 OMA:HTELTEY
Uniprot:Q55FI4
Length = 638
Score = 244 (91.0 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 69/229 (30%), Positives = 102/229 (44%)
Query: 50 SNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYAR 109
S + + D +IV L D+ EI I R+ Y FPEL L+ + YA
Sbjct: 149 SRYKLKFSPDKVDTMIVQAISLLDDLTTEINIYAMRAREWYGWHFPELGKLITNHTQYAN 208
Query: 110 VVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPL-PEDVLQKTIXXXXXXXXXX 168
+K +GN D +LP + V A + G + PED L
Sbjct: 209 AIKAMGNRKSAVDTDFTDILPEEVAEEVKEAAQISMGTEISPED-LDHIFALCDQFLSIQ 267
Query: 169 XXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKN 228
+++SRM IAPNL+ +VG V A+L+ AG L LAK PA +Q+LGA+K
Sbjct: 268 AYHTELTEYLKSRMEAIAPNLTILVGEIVGARLICRAGSLMNLAKYPASTIQILGAEKAL 327
Query: 229 LAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDS 277
T + + G + +I + + R+LAAK+ L+AR D+
Sbjct: 328 FRALKTKHNTPKYGLIYNAKIVGEASLKNKGKMSRVLAAKAALSARFDA 376
>UNIPROTKB|G4N2E5 [details] [associations]
symbol:MGG_07915 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0000154 "rRNA modification"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISS] [GO:0031428 "box
C/D snoRNP complex" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] Pfam:PF01798 EMBL:CM001233 GO:GO:0030686
GO:GO:0032040 GO:GO:0030490 GO:GO:0000154 GO:GO:0031428 KO:K14564
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 RefSeq:XP_003713157.1
ProteinModelPortal:G4N2E5 EnsemblFungi:MGG_07915T0 GeneID:2683842
KEGG:mgr:MGG_07915 Uniprot:G4N2E5
Length = 514
Score = 241 (89.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 61/219 (27%), Positives = 106/219 (48%)
Query: 86 IRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLT---LVDLEGLLPSAIIMVVSV--T 140
+R+ Y FPEL +V + YAR+V IGN+ +L L D+ +L ++
Sbjct: 198 VREWYGWHFPELIKIVSDNVTYARLVLLIGNKKELDDSKLHDIAAVLDEDGDKAQAIIDA 257
Query: 141 ASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAK 200
A + G+ + E ++ ++S+M +APNL I+G+ VAA+
Sbjct: 258 AKVSMGQDISEPDVEMVKSFATSVSKMAAYRKVLAESLDSKMGIVAPNLQCILGTPVAAR 317
Query: 201 LMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMR 260
L+ AG L+ L+K PA +Q+LGA+K T + + G + Q+ + R
Sbjct: 318 LISHAGSLTNLSKYPASTLQILGAEKALFRALKTKGNTPKYGLIYQSSFISRASARQKGR 377
Query: 261 ACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
R LA K ++A+R+D+ PS G + R+++ ++E
Sbjct: 378 ISRFLANKCSIASRIDNFSEQPSSRFGEALRQQLEDRLE 416
>UNIPROTKB|G4MPA1 [details] [associations]
symbol:MGG_07008 "Nucleolar protein nop-58" species:242507
"Magnaporthe oryzae 70-15" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030515 "snoRNA binding"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
Pfam:PF01798 GO:GO:0005730 GO:GO:0030515 EMBL:CM001231
GO:GO:0030686 GO:GO:0006364 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 GO:GO:0005732 GO:GO:0031428
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 KO:K14565
RefSeq:XP_003709766.1 ProteinModelPortal:G4MPA1
EnsemblFungi:MGG_07008T0 GeneID:2685181 KEGG:mgr:MGG_07008
Uniprot:G4MPA1
Length = 599
Score = 241 (89.9 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 62/229 (27%), Positives = 104/229 (45%)
Query: 49 ISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYA 108
+S H + D +I+ L D++ E+ +++ Y FPEL +++ + YA
Sbjct: 151 LSRHKLRFSADKVDVMIIQAINLLDDLDKELNTYAMRVKEWYGWHFPELGKILNDNLAYA 210
Query: 109 RVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXX 168
RV+ +G + T VDL +LP I V A + G + E+ L+
Sbjct: 211 RVILTLGMRSNATKVDLSEILPEEIETAVKAAADLSMGTEISEEDLENITLLAEQVVSYS 270
Query: 169 XXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKN 228
++++RM IAP+L+ +VG V A+L+ AG L LAK P +Q+LGA+K
Sbjct: 271 EYRAQLSSYLDARMRAIAPSLTELVGFLVGARLIAHAGSLMNLAKNPGSTIQILGAEKAL 330
Query: 229 LAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDS 277
T + + G + + + + R LAAK+ L R D+
Sbjct: 331 FRALKTKHATPKYGLIYHASLVGQATGKNKGKIARQLAAKAALGVRSDA 379
>SGD|S000005837 [details] [associations]
symbol:NOP58 "Protein involved in pre-rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0031428 "box C/D snoRNP
complex" evidence=IDA;IPI] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
SGD:S000005837 Pfam:PF01798 EMBL:BK006948 GO:GO:0030686
GO:GO:0017069 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 EMBL:X90565
GO:GO:0000480 GO:GO:0031428 eggNOG:COG1498 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310
OrthoDB:EOG4BZRB2 GO:GO:0006608 GeneTree:ENSGT00550000074998
EMBL:AF056070 EMBL:Z75217 PIR:S58322 RefSeq:NP_014955.1
ProteinModelPortal:Q12499 SMR:Q12499 DIP:DIP-5843N IntAct:Q12499
MINT:MINT-658431 STRING:Q12499 PaxDb:Q12499 PeptideAtlas:Q12499
PRIDE:Q12499 EnsemblFungi:YOR310C GeneID:854487 KEGG:sce:YOR310C
CYGD:YOR310c OMA:DLRTTPK NextBio:976810 Genevestigator:Q12499
GermOnline:YOR310C Uniprot:Q12499
Length = 511
Score = 239 (89.2 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 65/254 (25%), Positives = 109/254 (42%)
Query: 49 ISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYA 108
I H + D +I+ L D++ E+ ++ Y FPEL +V + YA
Sbjct: 147 IGRHKLKFSADKVDVMIIQAIALLDDLDKELNTYAMRCKEWYGWHFPELAKIVTDSVAYA 206
Query: 109 RVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXX 168
R++ +G + DL +LP I V A + G + + L
Sbjct: 207 RIILTMGIRSKASETDLSEILPEEIEERVKTAAEVSMGTEITQTDLDNINALAEQIVEFA 266
Query: 169 XXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKN 228
++ +RM IAPNL+ +VG V A+L+ +G L +LAK PA +Q+LGA+K
Sbjct: 267 AYREQLSNYLSARMKAIAPNLTQLVGELVGARLIAHSGSLISLAKSPASTIQILGAEKAL 326
Query: 229 LAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGD--PSGTA 286
T + G L + + + R+LAAK+ ++ R D+ D SG
Sbjct: 327 FRALKTKHDTPKYGLLYHASLVGQATGKNKGKIARVLAAKAAVSLRYDALAEDRDDSGDI 386
Query: 287 GRSFREEIHKKIEK 300
G R ++ ++ +
Sbjct: 387 GLESRAKVENRLSQ 400
>TAIR|locus:2181211 [details] [associations]
symbol:AT5G27120 "AT5G27120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
Pfam:PF01798 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005730 GO:GO:0042254 EMBL:AF007271 eggNOG:COG1498
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 KO:K14565
HOGENOM:HOG000196310 OMA:DLRTTPK EMBL:AF302490 EMBL:AY074281
EMBL:AY096684 EMBL:BT002060 IPI:IPI00520435 PIR:T01807
RefSeq:NP_198064.1 UniGene:At.10285 UniGene:At.55031
ProteinModelPortal:O04658 SMR:O04658 STRING:O04658 PaxDb:O04658
PRIDE:O04658 EnsemblPlants:AT5G27120.1 GeneID:832770
KEGG:ath:AT5G27120 TAIR:At5g27120 InParanoid:O04658
PhylomeDB:O04658 ProtClustDB:CLSN2684456 Genevestigator:O04658
Uniprot:O04658
Length = 533
Score = 233 (87.1 bits), Expect = 9.8e-19, P = 9.8e-19
Identities = 66/250 (26%), Positives = 110/250 (44%)
Query: 49 ISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYA 108
++ + + D +I+ L D++ E+ +R+ + FPEL +V I YA
Sbjct: 144 LARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWFGWHFPELAKIVQDNILYA 203
Query: 109 RVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXX 168
+ VK +GN ++ +D +L I + A + G + + L
Sbjct: 204 KAVKLMGNRINAAKLDFSEILADEIEAELKEAAVISMGTEVSDLDLLHIRELCDQVLSLA 263
Query: 169 XXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKN 228
+++SRM+ IAPNL+A+VG V A+L+ G L LAK P VQ+LGA+K
Sbjct: 264 EYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLAKQPGSTVQILGAEKAL 323
Query: 229 LAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGR 288
T + + G + + P + + R LAAKS LA R D+ T G
Sbjct: 324 FRALKTKHATPKYGLIFHASVVGQAAPKNKGKISRSLAAKSVLAIRCDALGDSQDNTMGV 383
Query: 289 SFREEIHKKI 298
R ++ ++
Sbjct: 384 ENRLKLEARL 393
>ASPGD|ASPL0000040023 [details] [associations]
symbol:AN10352 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0031428 "box C/D
snoRNP complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006364 "rRNA processing" evidence=IEA]
Pfam:PF01798 EMBL:BN001306 GO:GO:0030686 GO:GO:0006364
GO:GO:0032040 GO:GO:0031428 HOGENOM:HOG000196309 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 OMA:QEAPQEN EnsemblFungi:CADANIAT00010009
Uniprot:C8VIQ3
Length = 510
Score = 232 (86.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 69/283 (24%), Positives = 128/283 (45%)
Query: 22 NVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVI 81
+ SKL K R D M + L + + ++ D + I+ + ++ I
Sbjct: 134 HASKLLKQLREGD-MDTAQLGLGHAYSRAKVKFSVQRDDNH--IIQAIAILDQLDKAINT 190
Query: 82 IHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLT---LVDLEGLLPS--AIIMV 136
+R+ Y FPEL +V YA++ I ++ LT L D+ L+ +
Sbjct: 191 FSMRVREWYSWHFPELIKIVSDNQRYAQLALFIKDKKTLTDENLHDIAALVEDDEGVAQS 250
Query: 137 VSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSA 196
+ A + G+ + E ++ I ++ S+M+ +APNL+A++G
Sbjct: 251 IIDAAKRSMGQDISESDMENVISFAQRVVSLSKYRKSLHSYLVSKMNVVAPNLAALIGDI 310
Query: 197 VAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPP 256
V A+L+ AG L+ L+K PA VQ+LGA+K T + + G L + P
Sbjct: 311 VGARLISHAGSLTNLSKYPASTVQILGAEKALFRALKTKGNTPKYGLLYHSSFIGRAGPK 370
Query: 257 LRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
+ R R LA K ++A+R+D+ P+ G + ++++ +++E
Sbjct: 371 NKGRISRFLANKCSIASRIDNFSDTPTTKYGDALKKQVEERLE 413
>FB|FBgn0026196 [details] [associations]
symbol:nop5 "nop5" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01798 GO:GO:0005730 EMBL:AE014134 GO:GO:0006364
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 KO:K14565 OMA:DAHEQLA
GeneTree:ENSGT00550000074998 FlyBase:FBgn0026196 EMBL:AY061401
EMBL:FM245448 EMBL:FM245453 RefSeq:NP_477412.1 UniGene:Dm.3320
SMR:Q9VM69 IntAct:Q9VM69 MINT:MINT-335173 STRING:Q9VM69
EnsemblMetazoa:FBtr0079369 GeneID:33966 KEGG:dme:Dmel_CG10206
UCSC:CG10206-RA CTD:33966 InParanoid:Q9VM69 GenomeRNAi:33966
NextBio:786179 Uniprot:Q9VM69
Length = 511
Score = 232 (86.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 64/262 (24%), Positives = 116/262 (44%)
Query: 42 ALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLV 101
AL +S + + D +IV L D++ E+ R+ Y FPEL ++
Sbjct: 140 ALGLAHSLSRYKLKFSPDKIDTMIVQAQCLLDDLDKELNNYMMRAREWYGWHFPELGKII 199
Query: 102 HHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXX 161
I + + +K +G ++ DL +LP + V A + G + E+ +
Sbjct: 200 TDNIAFVKTIKLVGTRDNMATSDLSDILPEDVEEKVKEAAEISMGTEISEEDVLNIQCLC 259
Query: 162 XXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQL 221
++++RM +APNL+ +VG V A+L+ AG L LAK P+ VQ+
Sbjct: 260 DEIISINDYRTHLYDYLKARMMAMAPNLTVLVGDTVGARLIAHAGSLINLAKHPSSTVQI 319
Query: 222 LGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGD 281
LGA+K T + G + ++ + + R LAAK++LA RVD+ +
Sbjct: 320 LGAEKALFRALKTKKDTPKYGLIYHAQLVGQASQKNKGKMSRSLAAKASLATRVDAFGEE 379
Query: 282 PSGTAGRSFREEIHKKIEKWQE 303
+ G + + ++ ++ +E
Sbjct: 380 ATFELGAAHKVKLESRLRLLEE 401
>TAIR|locus:2096214 [details] [associations]
symbol:AT3G05060 "AT3G05060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] Pfam:PF01798 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0042254
EMBL:AC009177 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310 OMA:DAHEQLA
ProtClustDB:CLSN2684456 EMBL:AF302491 EMBL:AF412080 IPI:IPI00543036
RefSeq:NP_187157.1 UniGene:At.16937 ProteinModelPortal:Q9MAB3
SMR:Q9MAB3 STRING:Q9MAB3 PaxDb:Q9MAB3 PRIDE:Q9MAB3
EnsemblPlants:AT3G05060.1 GeneID:819668 KEGG:ath:AT3G05060
TAIR:At3g05060 InParanoid:Q9MAB3 PhylomeDB:Q9MAB3
Genevestigator:Q9MAB3 Uniprot:Q9MAB3
Length = 533
Score = 232 (86.7 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 65/250 (26%), Positives = 111/250 (44%)
Query: 49 ISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYA 108
++ + + D +I+ L D++ E+ +R+ Y FPEL ++ I YA
Sbjct: 145 LARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIISDNILYA 204
Query: 109 RVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXX 168
+ VK +GN ++ +D +L I + A + G + + L
Sbjct: 205 KSVKLMGNRVNAAKLDFSEILADEIEADLKDAAVISMGTEVSDLDLLHIRELCDQVLSLS 264
Query: 169 XXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKN 228
+++SRM+ IAPNL+A+VG V A+L+ G L L+K P VQ+LGA+K
Sbjct: 265 EYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLSKQPGSTVQILGAEKAL 324
Query: 229 LAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGR 288
T + + G + + P + + R LAAK+ LA RVD+ T G
Sbjct: 325 FRALKTKHATPKYGLIFHASLVGQAAPKHKGKISRSLAAKTVLAIRVDALGDSQDNTMGL 384
Query: 289 SFREEIHKKI 298
R ++ ++
Sbjct: 385 ENRAKLEARL 394
>RGD|620484 [details] [associations]
symbol:Nop58 "NOP58 ribonucleoprotein" species:10116 "Rattus
norvegicus" [GO:0000154 "rRNA modification" evidence=NAS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006608 "snRNP protein import into nucleus"
evidence=IDA] [GO:0008649 "rRNA methyltransferase activity"
evidence=NAS] [GO:0015030 "Cajal body" evidence=IEA;ISO]
[GO:0030515 "snoRNA binding" evidence=IEA;ISO] [GO:0030519 "snoRNP
binding" evidence=TAS] [GO:0031167 "rRNA methylation" evidence=NAS]
[GO:0051082 "unfolded protein binding" evidence=TAS] [GO:0070761
"pre-snoRNP complex" evidence=IEA;ISO] EMBL:AF194371 Pfam:PF01798
RGD:620484 GO:GO:0005737 GO:GO:0005730 GO:GO:0051082 GO:GO:0030515
GO:GO:0015030 GO:GO:0030519 GO:GO:0070761 GO:GO:0005732
GO:GO:0008649 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 KO:K14565 HOGENOM:HOG000196310 CTD:51602
GO:GO:0006608 GeneTree:ENSGT00550000074998 EMBL:AF069782
IPI:IPI00214536 RefSeq:NP_068522.1 UniGene:Rn.43930
ProteinModelPortal:Q9QZ86 STRING:Q9QZ86 PhosphoSite:Q9QZ86
PRIDE:Q9QZ86 Ensembl:ENSRNOT00000022676 GeneID:60373 KEGG:rno:60373
UCSC:RGD:620484 InParanoid:Q9QZ86 NextBio:612047
ArrayExpress:Q9QZ86 Genevestigator:Q9QZ86
GermOnline:ENSRNOG00000016486 Uniprot:Q9QZ86
Length = 534
Score = 232 (86.7 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 64/253 (25%), Positives = 113/253 (44%)
Query: 49 ISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFI---RDKYRLKFPELESLVHHPI 105
+S + + D +IV L D++ E+ +N+I R+ Y FPEL ++ +
Sbjct: 146 LSRYRLKFSADKVDTMIVQAISLLDDLDKEL---NNYIMRCREWYGWHFPELGKIISDNL 202
Query: 106 DYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXX 165
Y + ++K+G+ + L L + V A + G + E+ + +
Sbjct: 203 TYCKCLQKVGDRKNYASATLSEFLSEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVI 262
Query: 166 XXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAK 225
++++RM IAPN++ +VG V A+L+ AG L LAK A VQ+LGA+
Sbjct: 263 EISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAE 322
Query: 226 KKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGT 285
K + + G + + T P + + R+LAAK+ LA R D+ D S
Sbjct: 323 KALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSA 382
Query: 286 AGRSFREEIHKKI 298
G R ++ ++
Sbjct: 383 MGAENRAKLEARL 395
>UNIPROTKB|F1MW06 [details] [associations]
symbol:NOP56 "Nucleolar protein 56" species:9913 "Bos
taurus" [GO:0070761 "pre-snoRNP complex" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=IEA] Pfam:PF01798
IPI:IPI00712128 UniGene:Bt.49005 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 OMA:QEAPQEN GeneTree:ENSGT00550000075068
EMBL:DAAA02036191 Ensembl:ENSBTAT00000025042 Uniprot:F1MW06
Length = 596
Score = 233 (87.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 66/243 (27%), Positives = 111/243 (45%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLT-- 121
+I+ L ++ +I +R+ Y FPEL +++ Y R+ + IGN +L
Sbjct: 167 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRKELNEE 226
Query: 122 -LVDLEGLLPSAIIMVVSVTASTTS-GKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVE 179
L LE L A + AS +S G + L ++
Sbjct: 227 KLEKLEELTMDAAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 286
Query: 180 SRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQF 239
S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T +
Sbjct: 287 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 346
Query: 240 RVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
+ G + + + R R LA K ++A+R+D P+ G RE++ +++
Sbjct: 347 KYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLS 406
Query: 300 KWQ 302
++
Sbjct: 407 FYE 409
>UNIPROTKB|Q3SZ63 [details] [associations]
symbol:NOP56 "Nucleolar protein 56" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] Pfam:PF01798 GO:GO:0005737 GO:GO:0005730
GO:GO:0042254 EMBL:BC103114 IPI:IPI00712128 RefSeq:NP_001028794.1
UniGene:Bt.49005 ProteinModelPortal:Q3SZ63 STRING:Q3SZ63
PRIDE:Q3SZ63 GeneID:404165 KEGG:bta:404165 CTD:10528 eggNOG:COG1498
HOGENOM:HOG000196309 InParanoid:Q3SZ63 KO:K14564 OrthoDB:EOG41G342
NextBio:20817597 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 Uniprot:Q3SZ63
Length = 596
Score = 233 (87.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 66/243 (27%), Positives = 111/243 (45%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLT-- 121
+I+ L ++ +I +R+ Y FPEL +++ Y R+ + IGN +L
Sbjct: 167 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRKELNEE 226
Query: 122 -LVDLEGLLPSAIIMVVSVTASTTS-GKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVE 179
L LE L A + AS +S G + L ++
Sbjct: 227 KLEKLEELTMDAAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 286
Query: 180 SRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQF 239
S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T +
Sbjct: 287 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 346
Query: 240 RVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
+ G + + + R R LA K ++A+R+D P+ G RE++ +++
Sbjct: 347 KYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLS 406
Query: 300 KWQ 302
++
Sbjct: 407 FYE 409
>GENEDB_PFALCIPARUM|PF10_0085 [details] [associations]
symbol:PF10_0085 "nucleolar protein NOP5,
putative" species:5833 "Plasmodium falciparum" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] Pfam:PF01798
GO:GO:0003723 EMBL:AE014185 GO:GO:0006364 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 KO:K14565 HOGENOM:HOG000196310 OMA:DLRTTPK
HSSP:O28191 RefSeq:XP_001347370.1 ProteinModelPortal:Q8IJV7
PRIDE:Q8IJV7 EnsemblProtists:PF10_0085:mRNA GeneID:810243
KEGG:pfa:PF10_0085 EuPathDB:PlasmoDB:PF3D7_1008800
ProtClustDB:CLSZ2432650 Uniprot:Q8IJV7
Length = 469
Score = 227 (85.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 65/236 (27%), Positives = 107/236 (45%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLV 123
+IV L D++ EI + +++ Y FPEL ++ YA+ VK IG + V
Sbjct: 164 MIVQAVGLLEDLDKEINVFSMRLKEWYGWHFPELGKVITDNKIYAKCVKLIGFRNNAKNV 223
Query: 124 DLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMS 183
+L I + A + G + +D L +++ RM+
Sbjct: 224 NLLEETTEEIQKEIKQLAEISMGTEIEDDDLNCINELADRLLELTDYRESLATYLKYRMN 283
Query: 184 YIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGY 243
IAPNL+ +VG V AKL+ AG L +LAK P+ +Q+LG++K T + + G
Sbjct: 284 SIAPNLTYLVGDLVGAKLIAKAGSLMSLAKHPSSTLQILGSEKALFRALKTKSKTPKYGL 343
Query: 244 LEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
+ + T P L+ R R LAAK +L RVD+ + + + + K++E
Sbjct: 344 IYHATLVGQTAPKLKGRISRSLAAKLSLCTRVDALGNFVEPSIAITCKSHLEKRLE 399
>UNIPROTKB|Q8IJV7 [details] [associations]
symbol:PF10_0085 "Nucleolar protein NOP5, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006364 "rRNA processing" evidence=ISS] Pfam:PF01798
GO:GO:0003723 EMBL:AE014185 GO:GO:0006364 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 KO:K14565 HOGENOM:HOG000196310 OMA:DLRTTPK
HSSP:O28191 RefSeq:XP_001347370.1 ProteinModelPortal:Q8IJV7
PRIDE:Q8IJV7 EnsemblProtists:PF10_0085:mRNA GeneID:810243
KEGG:pfa:PF10_0085 EuPathDB:PlasmoDB:PF3D7_1008800
ProtClustDB:CLSZ2432650 Uniprot:Q8IJV7
Length = 469
Score = 227 (85.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 65/236 (27%), Positives = 107/236 (45%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLV 123
+IV L D++ EI + +++ Y FPEL ++ YA+ VK IG + V
Sbjct: 164 MIVQAVGLLEDLDKEINVFSMRLKEWYGWHFPELGKVITDNKIYAKCVKLIGFRNNAKNV 223
Query: 124 DLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMS 183
+L I + A + G + +D L +++ RM+
Sbjct: 224 NLLEETTEEIQKEIKQLAEISMGTEIEDDDLNCINELADRLLELTDYRESLATYLKYRMN 283
Query: 184 YIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGY 243
IAPNL+ +VG V AKL+ AG L +LAK P+ +Q+LG++K T + + G
Sbjct: 284 SIAPNLTYLVGDLVGAKLIAKAGSLMSLAKHPSSTLQILGSEKALFRALKTKSKTPKYGL 343
Query: 244 LEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
+ + T P L+ R R LAAK +L RVD+ + + + + K++E
Sbjct: 344 IYHATLVGQTAPKLKGRISRSLAAKLSLCTRVDALGNFVEPSIAITCKSHLEKRLE 399
>MGI|MGI:1914384 [details] [associations]
symbol:Nop56 "NOP56 ribonucleoprotein" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030515 "snoRNA binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070761 "pre-snoRNP
complex" evidence=ISO] Reactome:REACT_93132 MGI:MGI:1914384
Pfam:PF01798 GO:GO:0005737 GO:GO:0005730 GO:GO:0030515
GO:GO:0042254 GO:GO:0070761 GO:GO:0005732 CTD:10528 eggNOG:COG1498
HOGENOM:HOG000196309 KO:K14564 OrthoDB:EOG41G342 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 OMA:QEAPQEN ChiTaRS:NOP56
EMBL:AK009799 EMBL:AK011481 EMBL:AK077795 EMBL:AK150258
EMBL:BC002231 EMBL:BC021355 IPI:IPI00318048 RefSeq:NP_077155.2
UniGene:Mm.29363 ProteinModelPortal:Q9D6Z1 SMR:Q9D6Z1 IntAct:Q9D6Z1
STRING:Q9D6Z1 PhosphoSite:Q9D6Z1 PaxDb:Q9D6Z1 PRIDE:Q9D6Z1
Ensembl:ENSMUST00000103198 GeneID:67134 KEGG:mmu:67134
GeneTree:ENSGT00550000075068 InParanoid:Q9D6Z1 NextBio:323680
Bgee:Q9D6Z1 CleanEx:MM_NOL5A Genevestigator:Q9D6Z1
GermOnline:ENSMUSG00000027405 Uniprot:Q9D6Z1
Length = 580
Score = 229 (85.7 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 63/243 (25%), Positives = 110/243 (45%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLV 123
+I+ L ++ +I +R+ Y FPEL +V+ Y R+ + IGN +L
Sbjct: 167 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIVNDNATYCRLAQFIGNRRELNEE 226
Query: 124 DLEGL----LPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVE 179
LE L + A + + ++ G + L ++
Sbjct: 227 KLEKLEEITMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 286
Query: 180 SRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQF 239
S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T +
Sbjct: 287 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 346
Query: 240 RVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
+ G + + + R R LA K ++A+R+D P+ G RE++ +++
Sbjct: 347 KYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLS 406
Query: 300 KWQ 302
++
Sbjct: 407 FYE 409
>UNIPROTKB|O00567 [details] [associations]
symbol:NOP56 "Nucleolar protein 56" species:9606 "Homo
sapiens" [GO:0008219 "cell death" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005730 "nucleolus" evidence=TAS] [GO:0006364 "rRNA processing"
evidence=TAS] [GO:0030515 "snoRNA binding" evidence=IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=IDA] [GO:0031428 "box C/D snoRNP complex" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070761 "pre-snoRNP
complex" evidence=IDA] Reactome:REACT_17015 Pfam:PF01798
GO:GO:0005737 GO:GO:0008219 GO:GO:0030515 GO:GO:0070761
GO:GO:0006364 GO:GO:0031428 EMBL:AL049712 CTD:10528 eggNOG:COG1498
HOGENOM:HOG000196309 KO:K14564 OrthoDB:EOG41G342 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 EMBL:Y12065 EMBL:BC104791
EMBL:BC104793 IPI:IPI00411937 RefSeq:NP_006383.2 UniGene:Hs.376064
ProteinModelPortal:O00567 SMR:O00567 IntAct:O00567 STRING:O00567
PhosphoSite:O00567 SWISS-2DPAGE:O00567 PaxDb:O00567 PRIDE:O00567
Ensembl:ENST00000329276 GeneID:10528 KEGG:hsa:10528 UCSC:uc002wgh.3
GeneCards:GC20P002698 HGNC:HGNC:15911 HPA:HPA049918 MIM:614153
MIM:614154 neXtProt:NX_O00567 Orphanet:276198 PharmGKB:PA164724063
InParanoid:O00567 OMA:QEAPQEN PhylomeDB:O00567 ChiTaRS:NOP56
GenomeRNAi:10528 NextBio:39942 ArrayExpress:O00567 Bgee:O00567
Genevestigator:O00567 GermOnline:ENSG00000101361 Uniprot:O00567
Length = 594
Score = 229 (85.7 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 65/243 (26%), Positives = 110/243 (45%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLT-- 121
+I+ L ++ +I +R+ Y FPEL +++ Y R+ + IGN +L
Sbjct: 167 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNED 226
Query: 122 -LVDLEGLLPSAIIMVVSVTASTTS-GKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVE 179
L LE L + AS +S G + L ++
Sbjct: 227 KLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 286
Query: 180 SRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQF 239
S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T +
Sbjct: 287 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 346
Query: 240 RVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
+ G + + + R R LA K ++A+R+D P+ G RE++ +++
Sbjct: 347 KYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLS 406
Query: 300 KWQ 302
++
Sbjct: 407 FYE 409
>UNIPROTKB|E2QU53 [details] [associations]
symbol:NOP56 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070761 "pre-snoRNP complex" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=IEA] Pfam:PF01798
GO:GO:0030515 GO:GO:0070761 GO:GO:0005732 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 OMA:QEAPQEN GeneTree:ENSGT00550000075068
EMBL:AAEX03013839 Ensembl:ENSCAFT00000010731 Uniprot:E2QU53
Length = 597
Score = 229 (85.7 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 65/243 (26%), Positives = 110/243 (45%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLT-- 121
+I+ L ++ +I +R+ Y FPEL +++ Y R+ + IGN +L
Sbjct: 167 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEE 226
Query: 122 -LVDLEGLLPSAIIMVVSVTASTTS-GKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVE 179
L LE L + AS +S G + L ++
Sbjct: 227 KLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 286
Query: 180 SRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQF 239
S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T +
Sbjct: 287 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 346
Query: 240 RVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
+ G + + + R R LA K ++A+R+D P+ G RE++ +++
Sbjct: 347 KYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLS 406
Query: 300 KWQ 302
++
Sbjct: 407 FYE 409
>RGD|1308892 [details] [associations]
symbol:Nop56 "NOP56 ribonucleoprotein" species:10116 "Rattus
norvegicus" [GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0070761 "pre-snoRNP complex" evidence=ISO] Pfam:PF01798
RGD:1308892 GO:GO:0030515 GO:GO:0070761 GO:GO:0005732
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08060 SMART:SM00931
IPI:IPI00357923 UniGene:Rn.145204 HOVERGEN:HBG007270 EMBL:BC086568
ProteinModelPortal:Q5RJN5 STRING:Q5RJN5 UCSC:RGD:1308892
InParanoid:Q5RJN5 ArrayExpress:Q5RJN5 Genevestigator:Q5RJN5
Uniprot:Q5RJN5
Length = 499
Score = 227 (85.0 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 62/243 (25%), Positives = 110/243 (45%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLV 123
+I+ L ++ +I +R+ Y FPEL +++ Y R+ + IGN +L
Sbjct: 78 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEE 137
Query: 124 DLEGL----LPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVE 179
LE L + A + + ++ G + L ++
Sbjct: 138 KLEKLEEITMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHNYLR 197
Query: 180 SRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQF 239
S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T +
Sbjct: 198 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 257
Query: 240 RVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
+ G + + + R R LA K ++A+R+D P+ G RE++ +++
Sbjct: 258 KYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLS 317
Query: 300 KWQ 302
++
Sbjct: 318 FYE 320
>MGI|MGI:1933184 [details] [associations]
symbol:Nop58 "NOP58 ribonucleoprotein" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO;IC] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0006608 "snRNP protein
import into nucleus" evidence=ISO] [GO:0015030 "Cajal body"
evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0030519 "snoRNP binding" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0070761 "pre-snoRNP complex"
evidence=ISO] MGI:MGI:1933184 Pfam:PF01798 GO:GO:0005737
GO:GO:0005730 GO:GO:0030515 GO:GO:0042254 GO:GO:0015030
GO:GO:0030519 GO:GO:0070761 GO:GO:0005732 eggNOG:COG1498
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 KO:K14565
HOGENOM:HOG000196310 CTD:51602 OMA:DAHEQLA OrthoDB:EOG451DQQ
ChiTaRS:NOP58 GO:GO:0006608 EMBL:AF053232 EMBL:AK044216
EMBL:AK133959 EMBL:AK134286 EMBL:BC076604 EMBL:BC085135
IPI:IPI00463468 RefSeq:NP_061356.2 UniGene:Mm.220367
ProteinModelPortal:Q6DFW4 SMR:Q6DFW4 IntAct:Q6DFW4 STRING:Q6DFW4
PhosphoSite:Q6DFW4 PaxDb:Q6DFW4 PRIDE:Q6DFW4
Ensembl:ENSMUST00000027174 GeneID:55989 KEGG:mmu:55989
UCSC:uc007bdy.1 GeneTree:ENSGT00550000074998 InParanoid:Q6DFW4
NextBio:311710 Bgee:Q6DFW4 CleanEx:MM_NOL5 Genevestigator:Q6DFW4
Uniprot:Q6DFW4
Length = 536
Score = 227 (85.0 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 63/253 (24%), Positives = 113/253 (44%)
Query: 49 ISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFI---RDKYRLKFPELESLVHHPI 105
+S + + D +IV L D++ E+ +N+I R+ Y FPEL ++ +
Sbjct: 146 LSRYRLKFSADKVDTMIVQAISLLDDLDKEL---NNYIMRCREWYGWHFPELGKIISDNL 202
Query: 106 DYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXX 165
Y + ++K+G+ + L L + V A + G + E+ + +
Sbjct: 203 TYCKCLQKVGDRKNYASASLSEFLSEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVI 262
Query: 166 XXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAK 225
++++RM IAPN++ +VG V A+L+ AG L LAK A VQ+LGA+
Sbjct: 263 EISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAE 322
Query: 226 KKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGT 285
K + + G + + + P + + R+LAAK+ LA R D+ D S
Sbjct: 323 KALFRALKSRRDTPKYGLIYHASLVGQSSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSA 382
Query: 286 AGRSFREEIHKKI 298
G R ++ ++
Sbjct: 383 MGIENRAKLEARL 395
>UNIPROTKB|Q4KLK7 [details] [associations]
symbol:Nol5a "RCG26515, isoform CRA_c" species:10116
"Rattus norvegicus" [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
[GO:0070761 "pre-snoRNP complex" evidence=IEA] Pfam:PF01798
RGD:1308892 GO:GO:0030515 GO:GO:0070761 EMBL:CH473949 GO:GO:0005732
CTD:10528 eggNOG:COG1498 HOGENOM:HOG000196309 KO:K14564
OrthoDB:EOG41G342 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075068 EMBL:BC099149 IPI:IPI00357923
RefSeq:NP_001020903.1 UniGene:Rn.145204 STRING:Q4KLK7
Ensembl:ENSRNOT00000009564 GeneID:362214 KEGG:rno:362214
HOVERGEN:HBG007270 InParanoid:Q4KLK7 NextBio:679052
Genevestigator:Q4KLK7 Uniprot:Q4KLK7
Length = 588
Score = 227 (85.0 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 62/243 (25%), Positives = 110/243 (45%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLV 123
+I+ L ++ +I +R+ Y FPEL +++ Y R+ + IGN +L
Sbjct: 167 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNEE 226
Query: 124 DLEGL----LPSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVE 179
LE L + A + + ++ G + L ++
Sbjct: 227 KLEKLEEITMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHNYLR 286
Query: 180 SRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQF 239
S+MS +AP+LSA++G AV A+L+ AG L+ LAK PA VQ+LGA+K T +
Sbjct: 287 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTP 346
Query: 240 RVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
+ G + + + R R LA K ++A+R+D P+ G RE++ +++
Sbjct: 347 KYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLS 406
Query: 300 KWQ 302
++
Sbjct: 407 FYE 409
>ZFIN|ZDB-GENE-040109-1 [details] [associations]
symbol:nop56 "NOP56 ribonucleoprotein homolog"
species:7955 "Danio rerio" [GO:0007507 "heart development"
evidence=IMP] Pfam:PF01798 ZFIN:ZDB-GENE-040109-1 GO:GO:0007507
HOGENOM:HOG000196309 OrthoDB:EOG41G342 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 GeneTree:ENSGT00550000075068 HOVERGEN:HBG007270
EMBL:CT027620 EMBL:AY648814 IPI:IPI00932106 UniGene:Dr.76899
STRING:Q6DRE5 Ensembl:ENSDART00000114524 InParanoid:Q6DRE5
OMA:LINIECF Uniprot:Q6DRE5
Length = 548
Score = 224 (83.9 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 62/240 (25%), Positives = 110/240 (45%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLV 123
+I+ L ++ +I +R+ Y FPEL +V Y ++ K IGN +L+
Sbjct: 168 MIIQSIALLDQLDKDINTFSMRVREWYGYHFPELIKIVSDNSTYCKLAKLIGNRKELSEE 227
Query: 124 DLEGL----LPSAIIMVVSVTASTTSGKPL-PEDVLQKTIXXXXXXXXXXXXXXXXXXFV 178
LE + + SA + + ++ G + P D++ ++
Sbjct: 228 MLEAMEEITMDSAKAQAILDASRSSMGMDISPIDLINIECFSSRVVSLTDYRQELQE-YL 286
Query: 179 ESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQ 238
S+M +APNL+A++G V A+L+ AG L+ LAK PA VQ+LGA+K T +
Sbjct: 287 RSKMGQVAPNLAALIGEVVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNT 346
Query: 239 FRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKI 298
+ G + + + R R LA K T+A+R+D P+ G R+++ +++
Sbjct: 347 PKYGLIFHSTFIGRAAAKNKGRISRYLANKCTIASRIDCFSEVPTSVFGDKLRDQVEERL 406
>FB|FBgn0038964 [details] [associations]
symbol:Nop56 "Nop56" species:7227 "Drosophila melanogaster"
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS;NAS] [GO:0022008
"neurogenesis" evidence=IMP] Pfam:PF01798 GO:GO:0022008
eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
EMBL:BT001613 ProteinModelPortal:Q8IGT5 SMR:Q8IGT5 STRING:Q8IGT5
PaxDb:Q8IGT5 PRIDE:Q8IGT5 FlyBase:FBgn0038964 InParanoid:Q8IGT5
OrthoDB:EOG4V6WZ4 ArrayExpress:Q8IGT5 Bgee:Q8IGT5 Uniprot:Q8IGT5
Length = 496
Score = 217 (81.4 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 70/283 (24%), Positives = 124/283 (43%)
Query: 24 SKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIH 83
+KL K FTD V A L G S + +I+ L ++ ++
Sbjct: 131 AKLVKG--FTDKSAGV-AQLGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVNTFS 187
Query: 84 NFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLT---LVDLEGL-LPSAIIMVVSV 139
IR+ Y FPEL +V +A+ K I + +LT L DLE + + SA +
Sbjct: 188 MRIREWYSYHFPELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQAIIG 247
Query: 140 TASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAA 199
A + G + L ++ ++M+ +APNL +++G V A
Sbjct: 248 AAKMSMGMDISIVDLMNIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIGDQVGA 307
Query: 200 KLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRM 259
+L+ AG L+ LAK PA VQ+LGA+K T ++ + G + + +
Sbjct: 308 RLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRSNTPKYGLIYHSSFIGRAGLKNKG 367
Query: 260 RACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQ 302
R R LA K ++A+R+D P+ G + ++++ +++ ++
Sbjct: 368 RISRFLANKCSIASRIDCFLEQPTSVFGETLKQQVEDRLKFYE 410
>SGD|S000004187 [details] [associations]
symbol:NOP56 "Nucleolar protein component of the box C/D
snoRNP complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0031428
"box C/D snoRNP complex" evidence=IDA;IPI] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0000154 "rRNA modification"
evidence=TAS] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] SGD:S000004187
Pfam:PF01798 EMBL:BK006945 GO:GO:0030686 GO:GO:0032040 EMBL:U14913
GO:GO:0000154 GO:GO:0031428 eggNOG:COG1498 HOGENOM:HOG000196309
KO:K14564 InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 PROSITE:PS51358 OMA:QEAPQEN
GeneTree:ENSGT00550000075068 OrthoDB:EOG42FWS6 EMBL:U20237
PIR:S48550 RefSeq:NP_013298.1 ProteinModelPortal:Q12460 SMR:Q12460
DIP:DIP-4405N IntAct:Q12460 MINT:MINT-525679 STRING:Q12460
PaxDb:Q12460 PeptideAtlas:Q12460 EnsemblFungi:YLR197W GeneID:850894
KEGG:sce:YLR197W CYGD:YLR197w NextBio:967272 Genevestigator:Q12460
GermOnline:YLR197W Uniprot:Q12460
Length = 504
Score = 210 (79.0 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 60/240 (25%), Positives = 109/240 (45%)
Query: 65 IVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDL---T 121
I+ L ++ +I +++ Y FPEL LV +A++V I ++ L +
Sbjct: 174 IIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNYTFAKLVLFIKDKASLNDDS 233
Query: 122 LVDLEGLL--PSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVE 179
L DL LL S I V A + G+ + E ++ ++
Sbjct: 234 LHDLAALLNEDSGIAQRVIDNARISMGQDISETDMENVCVFAQRVASLADYRRQLYDYLC 293
Query: 180 SRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQF 239
+M +APNLS ++G + A+L+ AG L+ L+K A VQ+LGA+K T +
Sbjct: 294 EKMHTVAPNLSELIGEVIGARLISHAGSLTNLSKQAASTVQILGAEKALFRALKTKGNTP 353
Query: 240 RVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
+ G + + + R R LA K ++A+R+D+ +PS G ++++ +++E
Sbjct: 354 KYGLIYHSGFISKASAKNKGRISRYLANKCSMASRIDNYSEEPSNVFGSVLKKQVEQRLE 413
>DICTYBASE|DDB_G0285679 [details] [associations]
symbol:nol5a "NOP5 family protein" species:44689
"Dictyostelium discoideum" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0285679 Pfam:PF01798 GO:GO:0005730
GenomeReviews:CM000153_GR EMBL:AAFI02000079 GO:GO:0006364
GO:GO:0005732 eggNOG:COG1498 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 RefSeq:XP_638211.1
ProteinModelPortal:Q54MT2 STRING:Q54MT2 PRIDE:Q54MT2
EnsemblProtists:DDB0237576 GeneID:8625259 KEGG:ddi:DDB_G0285679
OMA:DSMVNDT ProtClustDB:CLSZ2430191 Uniprot:Q54MT2
Length = 540
Score = 209 (78.6 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 59/241 (24%), Positives = 111/241 (46%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLT-- 121
+I+ L ++ ++ +R+ Y FPEL ++ + +A++ K I N+ +LT
Sbjct: 165 MIIQSICLLEQLDKDLNTFFMRLREWYSWHFPELLKIIESQVHFAKLAKLIQNKKNLTEE 224
Query: 122 -LVDLEGLLPS--AIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFV 178
L +++ +L ++ V A + G + + L + ++
Sbjct: 225 SLDEIKEILEDNESLAKDVLSAAKASMGGDISQIDLVTVMHFADRVISLDEYRTNLTQYL 284
Query: 179 ESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQ 238
+M IAPNLSA+VG + AKL+ AG L++LAK PA VQ+LGA+K
Sbjct: 285 AKKMQDIAPNLSALVGDRIGAKLISRAGSLTSLAKYPASTVQILGAEKALFRAMKVRGKT 344
Query: 239 FRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKI 298
+ G + S + R R L+ K ++A R+D +P+ G + ++++ +I
Sbjct: 345 PKYGIIFNASAVSSETKN-KGRIARCLSNKISIATRIDCFSDNPTAKFGVALKQQVADRI 403
Query: 299 E 299
+
Sbjct: 404 K 404
>CGD|CAL0000142 [details] [associations]
symbol:SIK1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0031428 "box C/D snoRNP complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] CGD:CAL0000142
Pfam:PF01798 EMBL:AACQ01000032 GO:GO:0032040 eggNOG:COG1498
HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 RefSeq:XP_719331.1 ProteinModelPortal:Q5ACS3
STRING:Q5ACS3 GeneID:3638925 KEGG:cal:CaO19.7569 Uniprot:Q5ACS3
Length = 516
Score = 207 (77.9 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 57/240 (23%), Positives = 107/240 (44%)
Query: 65 IVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLT--- 121
I+ L ++ +I +++ Y FPEL +V YA++ I ++ LT
Sbjct: 173 IIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKIVPDNYSYAKLALSIKDKASLTDDS 232
Query: 122 LVDLEGLL--PSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVE 179
L D+ +L S + V A + G+ + E + I ++
Sbjct: 233 LHDVAAILNDDSGLAQRVIDNAKISMGQDISEQDMDNVITFAQRVVNLYEYRQQLYKYLT 292
Query: 180 SRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQF 239
+M +APNLS ++G V A+L+ AG L+ L+K A VQ+LGA+K T +
Sbjct: 293 DKMHTVAPNLSTLIGEVVGARLISHAGSLTNLSKQAASTVQILGAEKALFRALKTKGNTP 352
Query: 240 RVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
+ G + + + R R LA K ++A+R+D+ +P+ G ++++ +++
Sbjct: 353 KYGLIYHSSFIGKASAKNKGRISRYLANKCSIASRIDNYSEEPTTAFGEILKKQVEDRLK 412
>UNIPROTKB|Q5ACS3 [details] [associations]
symbol:SIK1 "Putative uncharacterized protein SIK1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] CGD:CAL0000142 Pfam:PF01798
EMBL:AACQ01000032 GO:GO:0032040 eggNOG:COG1498 HOGENOM:HOG000196309
KO:K14564 InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 RefSeq:XP_719331.1
ProteinModelPortal:Q5ACS3 STRING:Q5ACS3 GeneID:3638925
KEGG:cal:CaO19.7569 Uniprot:Q5ACS3
Length = 516
Score = 207 (77.9 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 57/240 (23%), Positives = 107/240 (44%)
Query: 65 IVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLT--- 121
I+ L ++ +I +++ Y FPEL +V YA++ I ++ LT
Sbjct: 173 IIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKIVPDNYSYAKLALSIKDKASLTDDS 232
Query: 122 LVDLEGLL--PSAIIMVVSVTASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVE 179
L D+ +L S + V A + G+ + E + I ++
Sbjct: 233 LHDVAAILNDDSGLAQRVIDNAKISMGQDISEQDMDNVITFAQRVVNLYEYRQQLYKYLT 292
Query: 180 SRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQF 239
+M +APNLS ++G V A+L+ AG L+ L+K A VQ+LGA+K T +
Sbjct: 293 DKMHTVAPNLSTLIGEVVGARLISHAGSLTNLSKQAASTVQILGAEKALFRALKTKGNTP 352
Query: 240 RVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299
+ G + + + R R LA K ++A+R+D+ +P+ G ++++ +++
Sbjct: 353 KYGLIYHSSFIGKASAKNKGRISRYLANKCSIASRIDNYSEEPTTAFGEILKKQVEDRLK 412
>WB|WBGene00010627 [details] [associations]
symbol:K07C5.4 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] Pfam:PF01798 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040018 GO:GO:0040035 EMBL:Z71181
eggNOG:COG1498 HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 GeneTree:ENSGT00550000075068
OMA:QQLHEYI PIR:T23405 RefSeq:NP_505660.1 ProteinModelPortal:Q21276
SMR:Q21276 STRING:Q21276 PaxDb:Q21276 EnsemblMetazoa:K07C5.4.1
EnsemblMetazoa:K07C5.4.2 GeneID:179442 KEGG:cel:CELE_K07C5.4
UCSC:K07C5.4 CTD:179442 WormBase:K07C5.4 InParanoid:Q21276
NextBio:905416 Uniprot:Q21276
Length = 486
Score = 206 (77.6 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 66/243 (27%), Positives = 109/243 (44%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKI--GNEM--- 118
+++ L ++ +I + IR+ Y +PEL L Y+R+ I N+M
Sbjct: 170 MVIQSIALLDQLDKDINLFGMRIREWYSYHYPELFRLAPDQYKYSRLAVAILDRNKMAEN 229
Query: 119 -DLTLVDLEGLLPSAIIMVVSVTASTTS-GKPLPEDVLQKTIXXXXXXXXXXXXXXXXXX 176
+L LE L + + A+ TS G + + L+
Sbjct: 230 ENLENEILEILDNDSEKTAQIIEAARTSMGMDISDLDLENIKRFAARVSSLMEYRQQLHE 289
Query: 177 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTAT 236
+++ RM + AP+LSA++G V A+L+ AG L+ LAK PA VQ+LGA+K T +
Sbjct: 290 YIKDRMDHCAPSLSALIGEQVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRS 349
Query: 237 SQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHK 296
+ + G L + + R R LA K ++AARVD P T G R+++
Sbjct: 350 NTPKYGLLFHSSFIGKAGTKNKGRVSRYLANKCSIAARVDCFSETPVSTYGEFLRQQVED 409
Query: 297 KIE 299
++E
Sbjct: 410 RLE 412
>TAIR|locus:2205270 [details] [associations]
symbol:NOP56 "homolog of nucleolar protein NOP56"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] Pfam:PF01798 EMBL:CP002684
GO:GO:0009506 GO:GO:0005618 GO:GO:0005730 UniGene:At.48973
EMBL:AC009894 HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 HSSP:O28191 ProtClustDB:CLSN2682875 EMBL:AF302492
EMBL:AY039541 EMBL:AY102151 EMBL:AY087080 IPI:IPI00548989
PIR:D96602 RefSeq:NP_176007.1 UniGene:At.22033
ProteinModelPortal:Q9SGT7 SMR:Q9SGT7 IntAct:Q9SGT7 STRING:Q9SGT7
PRIDE:Q9SGT7 EnsemblPlants:AT1G56110.1 GeneID:842063
KEGG:ath:AT1G56110 TAIR:At1g56110 InParanoid:Q9SGT7 OMA:GSHITEA
PhylomeDB:Q9SGT7 Genevestigator:Q9SGT7 Uniprot:Q9SGT7
Length = 522
Score = 200 (75.5 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 65/221 (29%), Positives = 105/221 (47%)
Query: 86 IRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLT------LVDLEGLLPSAIIMVVSV 139
+R+ Y FPEL +V+ YARV K I ++ LT L ++ G A ++ +
Sbjct: 192 VREWYSWHFPELVKIVNDNYLYARVSKMIDDKSKLTEDHIPMLTEVLGDEDKAKEVIEAG 251
Query: 140 TASTTSGKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAA 199
AS S P D++ V ++MS IAPNL+A++G V A
Sbjct: 252 KASMGSDLS-PLDLINVQTFAQKVMDLADYRKKLYDYLV-TKMSDIAPNLAALIGEMVGA 309
Query: 200 KLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRM 259
+L+ AG L+ LAK P+ +Q+LGA+K T + + G + + +
Sbjct: 310 RLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKG 369
Query: 260 RACRLLAAKSTLAARVDSTRGDPSGTA-GRSFREEIHKKIE 299
R R LA K ++A+R+D D + TA G RE++ +++E
Sbjct: 370 RIARYLANKCSIASRIDCF-ADGATTAFGEKLREQVEERLE 409
Score = 39 (18.8 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 34 DIMQKVEAALQNGSDISNHGMVLE 57
+I Q EA + SD+S G V++
Sbjct: 23 EIGQNTEAVRTSVSDLSRFGRVVQ 46
>POMBASE|SPBC646.10c [details] [associations]
symbol:SPBC646.10c "U3 snoRNP protein Nop56 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO;IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISO]
Pfam:PF01798 PomBase:SPBC646.10c GO:GO:0005730 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0030532 GO:GO:0005732
eggNOG:COG1498 HOGENOM:HOG000196309 KO:K14564 InterPro:IPR012974
InterPro:IPR012976 InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060
SMART:SM00931 PROSITE:PS51358 PIR:T40586 RefSeq:NP_595368.1
ProteinModelPortal:O94514 IntAct:O94514 STRING:O94514
EnsemblFungi:SPBC646.10c.1 GeneID:2541087 KEGG:spo:SPBC646.10c
OMA:QQLHEYI OrthoDB:EOG42FWS6 NextBio:20802200 Uniprot:O94514
Length = 497
Score = 203 (76.5 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 57/240 (23%), Positives = 110/240 (45%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEM---DL 120
+I+ + ++ +I +++ Y FPEL +V YA +V +G++ D
Sbjct: 169 MIIQAIAILDQLDKDINTFAMRMKEWYSWHFPELSKIVGDNYKYAVIVTLVGDKTTINDE 228
Query: 121 TLVDLEGLLPSAIIMVVSV-TASTTS-GKPLPEDVLQKTIXXXXXXXXXXXXXXXXXXFV 178
L DL ++ + S+ A S G+ + E L+ + ++
Sbjct: 229 MLHDLAAVVDDDKDIAQSIINAGKVSMGQDISEIDLENILSFAERVIKLSNYRKQLHNYL 288
Query: 179 ESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQ 238
+M+ +APNL+ ++G V A+L+ AG L+ L+K PA VQ+LGA+K T +
Sbjct: 289 VQKMNVVAPNLAELIGEMVGARLISHAGSLTNLSKCPASTVQILGAEKALFRALKTRGNT 348
Query: 239 FRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKI 298
+ G + + + R R LA K ++A+R+D+ P+ G+ R ++ +++
Sbjct: 349 PKYGIIYHSSFIGKAGAKNKGRISRFLANKCSIASRIDNFSDAPTTAFGQVLRRQVEERL 408
>TAIR|locus:2087755 [details] [associations]
symbol:AT3G12860 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0006606 "protein import into
nucleus" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0042991 "transcription factor
import into nucleus" evidence=RCA] Pfam:PF01798 EMBL:CP002686
GO:GO:0003676 GO:GO:0030529 EMBL:AB024033 HOGENOM:HOG000196309
KO:K14564 InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931 OMA:QEAPQEN HSSP:O28191
IPI:IPI00527919 RefSeq:NP_187892.2 UniGene:At.53283
ProteinModelPortal:Q9LTV0 SMR:Q9LTV0 STRING:Q9LTV0 PRIDE:Q9LTV0
EnsemblPlants:AT3G12860.1 GeneID:820468 KEGG:ath:AT3G12860
TAIR:At3g12860 InParanoid:Q9LTV0 PhylomeDB:Q9LTV0
ProtClustDB:CLSN2682875 ArrayExpress:Q9LTV0 Genevestigator:Q9LTV0
Uniprot:Q9LTV0
Length = 499
Score = 192 (72.6 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 62/221 (28%), Positives = 104/221 (47%)
Query: 86 IRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAI-----IMVVSVT 140
+R+ Y FPEL +V+ YA+V K I ++ L+ + +L A+ V
Sbjct: 192 VREWYSWHFPELVKIVNDNYLYAKVSKIIVDKSKLSEEHIP-MLTEALGDEDKAREVIEA 250
Query: 141 ASTTSGKPL-PEDVLQKTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAA 199
+ G+ L P D++ V ++MS IAPNL+A++G V A
Sbjct: 251 GKASMGQDLSPVDLINVQTFAQRVMDLADYRKKLYDYLV-TKMSDIAPNLAALIGEMVGA 309
Query: 200 KLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRM 259
+L+ AG L+ LAK P+ +Q+LGA+K T + + G + + +
Sbjct: 310 RLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKG 369
Query: 260 RACRLLAAKSTLAARVDSTRGDPSGTA-GRSFREEIHKKIE 299
R R LA K ++A+R+D D S TA G RE++ ++++
Sbjct: 370 RIARFLANKCSIASRIDCF-SDNSTTAFGEKLREQVEERLD 409
Score = 40 (19.1 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 34 DIMQKVEAALQNGSDISNHGMVLE 57
+I Q EA + SD+S G V++
Sbjct: 23 EIGQNTEAVRSSVSDLSRFGRVVQ 46
>UNIPROTKB|H9L0K4 [details] [associations]
symbol:H9L0K4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
[GO:0070761 "pre-snoRNP complex" evidence=IEA] Pfam:PF01798
InterPro:IPR012974 InterPro:IPR012976 InterPro:IPR002687
Pfam:PF08156 Pfam:PF08060 SMART:SM00931
GeneTree:ENSGT00550000075068 EMBL:AADN02044049 EMBL:AADN02044050
EMBL:AADN02044051 Ensembl:ENSGALT00000023411 Uniprot:H9L0K4
Length = 486
Score = 135 (52.6 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 177 FVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 226
++ S+MS +AP+LSA++G V A+L+ AG L+ LAK PA VQ+LGA+K
Sbjct: 242 YLRSKMSQVAPSLSALIGEVVGARLISHAGSLTNLAKYPASTVQILGAEK 291
Score = 37 (18.1 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 64 LIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLV 101
+I+ L ++ +I +R+ Y FPEL +V
Sbjct: 140 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELIKIV 177
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 339 280 0.00082 115 3 11 22 0.37 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 63
No. of states in DFA: 601 (64 KB)
Total size of DFA: 178 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.88u 0.12s 22.00t Elapsed: 00:00:01
Total cpu time: 21.89u 0.12s 22.01t Elapsed: 00:00:01
Start: Thu May 9 16:27:15 2013 End: Thu May 9 16:27:16 2013