Query 019555
Match_columns 339
No_of_seqs 129 out of 1206
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 02:41:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019555.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019555hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK09051 beta-ketothiolase; Pr 100.0 2E-57 4.4E-62 432.7 31.9 325 11-338 1-328 (394)
2 PRK08235 acetyl-CoA acetyltran 100.0 9.8E-58 2.1E-62 435.1 29.4 325 13-338 2-327 (393)
3 PRK06205 acetyl-CoA acetyltran 100.0 9.5E-57 2E-61 430.4 31.0 325 13-338 2-334 (404)
4 PRK06366 acetyl-CoA acetyltran 100.0 3.4E-57 7.4E-62 431.3 27.3 317 13-339 2-322 (388)
5 PRK05656 acetyl-CoA acetyltran 100.0 3.6E-56 7.8E-61 424.9 31.3 325 13-338 2-327 (393)
6 PRK06633 acetyl-CoA acetyltran 100.0 5.4E-56 1.2E-60 421.2 28.7 325 11-338 1-326 (392)
7 PRK13359 beta-ketoadipyl CoA t 100.0 1.5E-55 3.3E-60 419.6 30.1 322 13-338 2-332 (400)
8 PRK05790 putative acyltransfer 100.0 5E-55 1.1E-59 418.2 31.7 326 13-339 2-328 (393)
9 PRK06504 acetyl-CoA acetyltran 100.0 5E-55 1.1E-59 415.1 30.8 319 13-339 2-325 (390)
10 PRK09050 beta-ketoadipyl CoA t 100.0 5.4E-55 1.2E-59 416.3 30.1 323 13-338 2-333 (401)
11 PRK09052 acetyl-CoA acetyltran 100.0 9.5E-55 2.1E-59 414.7 30.8 320 9-338 2-333 (399)
12 PRK08242 acetyl-CoA acetyltran 100.0 1E-54 2.2E-59 413.5 30.8 310 12-338 1-336 (402)
13 TIGR02430 pcaF beta-ketoadipyl 100.0 8.7E-55 1.9E-59 414.4 29.5 323 13-338 1-332 (400)
14 PRK08131 acetyl-CoA acetyltran 100.0 1.9E-54 4.2E-59 412.5 30.1 324 12-338 1-332 (401)
15 PRK06954 acetyl-CoA acetyltran 100.0 2.8E-54 6E-59 412.2 29.9 324 12-338 6-331 (397)
16 PRK06445 acetyl-CoA acetyltran 100.0 1.1E-53 2.4E-58 408.1 30.8 320 13-339 2-329 (394)
17 PRK07850 acetyl-CoA acetyltran 100.0 1.4E-53 3E-58 405.5 31.0 316 12-339 1-322 (387)
18 PRK08170 acetyl-CoA acetyltran 100.0 1.4E-53 3.1E-58 410.8 30.5 322 11-338 1-343 (426)
19 PRK08947 fadA 3-ketoacyl-CoA t 100.0 9.1E-54 2E-58 407.1 28.8 313 13-339 2-319 (387)
20 PRK08963 fadI 3-ketoacyl-CoA t 100.0 1.2E-53 2.6E-58 411.2 29.1 323 13-339 5-346 (428)
21 TIGR02446 FadI fatty oxidation 100.0 1.4E-53 3E-58 409.7 29.1 324 12-339 6-348 (430)
22 PRK07661 acetyl-CoA acetyltran 100.0 2.1E-53 4.6E-58 404.8 29.2 314 13-338 2-325 (391)
23 TIGR02445 fadA fatty oxidation 100.0 2.1E-53 4.5E-58 404.0 27.5 312 14-339 1-317 (385)
24 PRK06025 acetyl-CoA acetyltran 100.0 9.8E-53 2.1E-57 398.0 30.9 317 13-337 2-350 (417)
25 cd00751 thiolase Thiolase are 100.0 6.6E-53 1.4E-57 402.6 29.7 320 16-338 1-321 (386)
26 KOG1390 Acetyl-CoA acetyltrans 100.0 5E-54 1.1E-58 377.9 18.0 326 9-337 2-329 (396)
27 TIGR01930 AcCoA-C-Actrans acet 100.0 1.4E-52 3.1E-57 399.8 29.2 321 17-339 1-323 (386)
28 PLN02644 acetyl-CoA C-acetyltr 100.0 3.4E-52 7.4E-57 397.7 30.8 327 13-339 1-328 (394)
29 PLN02287 3-ketoacyl-CoA thiola 100.0 5.9E-52 1.3E-56 399.6 29.8 315 13-338 46-367 (452)
30 PRK09268 acetyl-CoA acetyltran 100.0 5E-51 1.1E-55 392.0 29.6 316 13-338 7-345 (427)
31 PRK07801 acetyl-CoA acetyltran 100.0 7.9E-51 1.7E-55 387.5 28.8 313 13-339 2-317 (382)
32 PRK07108 acetyl-CoA acetyltran 100.0 1.9E-50 4.2E-55 384.6 29.1 314 13-338 2-326 (392)
33 KOG1391 Acetyl-CoA acetyltrans 100.0 9.6E-51 2.1E-55 348.2 21.3 324 12-337 3-328 (396)
34 PRK07851 acetyl-CoA acetyltran 100.0 2.9E-48 6.3E-53 371.5 28.7 318 13-338 2-339 (406)
35 PRK06690 acetyl-CoA acetyltran 100.0 4.8E-48 1E-52 362.8 27.4 291 14-338 2-294 (361)
36 PF00108 Thiolase_N: Thiolase, 100.0 1.3E-47 2.7E-52 347.2 23.1 262 12-274 1-264 (264)
37 PRK06065 acetyl-CoA acetyltran 100.0 6.8E-47 1.5E-51 359.7 25.3 281 13-339 9-301 (392)
38 PRK06365 acetyl-CoA acetyltran 100.0 6E-47 1.3E-51 364.4 24.8 291 5-339 8-332 (430)
39 PRK12578 acetyl-CoA acetyltran 100.0 9.8E-47 2.1E-51 360.0 24.0 283 13-339 1-294 (385)
40 PRK08313 acetyl-CoA acetyltran 100.0 1.6E-46 3.4E-51 357.8 24.2 280 11-339 1-294 (386)
41 PRK06157 acetyl-CoA acetyltran 100.0 3.3E-46 7.2E-51 356.9 24.2 284 13-339 7-305 (398)
42 PRK08256 lipid-transfer protei 100.0 2.5E-46 5.4E-51 357.8 22.3 288 13-339 1-301 (391)
43 PRK06289 acetyl-CoA acetyltran 100.0 3.7E-46 7.9E-51 357.8 23.3 294 12-339 2-313 (403)
44 PRK06158 thiolase; Provisional 100.0 5.4E-46 1.2E-50 354.1 22.4 274 12-339 7-291 (384)
45 PRK06066 acetyl-CoA acetyltran 100.0 2.1E-45 4.5E-50 347.8 24.4 278 12-339 3-295 (385)
46 PRK08142 acetyl-CoA acetyltran 100.0 1.5E-45 3.3E-50 350.0 22.7 279 13-339 5-292 (388)
47 PRK06064 acetyl-CoA acetyltran 100.0 2.3E-45 4.9E-50 351.2 23.9 282 13-339 2-295 (389)
48 cd00829 SCP-x_thiolase Thiolas 100.0 5.1E-45 1.1E-49 347.7 22.1 281 18-339 1-288 (375)
49 PTZ00455 3-ketoacyl-CoA thiola 100.0 1.1E-44 2.5E-49 348.5 23.9 301 11-339 10-346 (438)
50 PRK07855 lipid-transfer protei 100.0 1.6E-44 3.5E-49 343.6 23.9 284 12-339 3-303 (386)
51 PRK07516 acetyl-CoA acetyltran 100.0 1.3E-44 2.8E-49 345.7 23.3 283 12-339 1-297 (389)
52 PRK06059 lipid-transfer protei 100.0 1.5E-44 3.1E-49 346.5 23.6 286 11-338 2-309 (399)
53 KOG1389 3-oxoacyl CoA thiolase 100.0 8.2E-44 1.8E-48 312.4 18.8 314 12-336 35-354 (435)
54 PRK07937 lipid-transfer protei 100.0 5.1E-43 1.1E-47 328.4 23.9 274 13-339 2-284 (352)
55 cd00826 nondecarbox_cond_enzym 100.0 2.6E-41 5.6E-46 322.5 23.7 286 18-339 1-306 (393)
56 PRK08257 acetyl-CoA acetyltran 100.0 2.1E-40 4.5E-45 323.7 25.0 296 11-339 2-329 (498)
57 COG0183 PaaJ Acetyl-CoA acetyl 100.0 5.4E-40 1.2E-44 312.7 16.2 313 12-337 1-322 (392)
58 KOG1406 Peroxisomal 3-ketoacyl 100.0 5.2E-40 1.1E-44 283.0 7.8 289 14-338 7-308 (408)
59 KOG1392 Acetyl-CoA acetyltrans 100.0 1E-37 2.3E-42 271.7 11.3 324 10-338 39-380 (465)
60 PRK14691 3-oxoacyl-(acyl carri 99.9 1.1E-22 2.5E-27 190.3 18.7 202 37-334 4-238 (342)
61 TIGR03150 fabF beta-ketoacyl-a 99.9 5.8E-23 1.3E-27 198.0 15.6 199 38-332 72-305 (407)
62 cd00825 decarbox_cond_enzymes 99.9 1.8E-22 3.8E-27 189.3 17.2 207 14-334 1-237 (332)
63 PTZ00050 3-oxoacyl-acyl carrie 99.9 8.6E-23 1.9E-27 197.3 14.8 204 35-333 75-315 (421)
64 PRK07314 3-oxoacyl-(acyl carri 99.9 2.2E-22 4.7E-27 194.3 15.6 200 38-333 73-307 (411)
65 PRK06333 3-oxoacyl-(acyl carri 99.9 2.4E-22 5.2E-27 194.7 15.6 201 38-333 83-319 (424)
66 cd00327 cond_enzymes Condensin 99.9 8.1E-22 1.8E-26 177.8 17.2 171 35-336 5-179 (254)
67 PLN02836 3-oxoacyl-[acyl-carri 99.9 1.7E-21 3.7E-26 189.0 18.2 201 37-333 93-330 (437)
68 PRK08722 3-oxoacyl-(acyl carri 99.9 8.1E-22 1.8E-26 189.8 15.1 200 39-334 76-310 (414)
69 COG0332 FabH 3-oxoacyl-[acyl-c 99.9 7.4E-22 1.6E-26 181.1 13.2 110 21-131 36-145 (323)
70 smart00825 PKS_KS Beta-ketoacy 99.9 1.5E-21 3.2E-26 189.2 15.2 196 38-334 88-311 (424)
71 cd00828 elong_cond_enzymes "el 99.9 2.6E-21 5.6E-26 186.6 15.1 203 36-334 71-306 (407)
72 PRK05952 3-oxoacyl-(acyl carri 99.9 7.2E-21 1.6E-25 180.9 17.1 194 38-333 57-285 (381)
73 PLN02787 3-oxoacyl-[acyl-carri 99.9 7E-21 1.5E-25 187.3 16.7 199 39-333 201-436 (540)
74 KOG1394 3-oxoacyl-(acyl-carrie 99.9 9E-22 2E-26 176.9 8.2 201 37-333 94-332 (440)
75 COG0304 FabB 3-oxoacyl-(acyl-c 99.9 2.3E-20 4.9E-25 177.2 17.1 201 36-332 70-306 (412)
76 cd00834 KAS_I_II Beta-ketoacyl 99.8 3.2E-20 7E-25 178.8 17.6 202 36-333 70-306 (406)
77 cd00833 PKS polyketide synthas 99.8 7.2E-20 1.6E-24 177.2 16.5 197 37-334 87-311 (421)
78 PRK07103 polyketide beta-ketoa 99.8 5.3E-20 1.1E-24 177.3 13.7 204 37-334 80-313 (410)
79 PRK07910 3-oxoacyl-(acyl carri 99.8 1.6E-19 3.5E-24 174.0 16.6 198 39-333 85-317 (418)
80 cd00832 CLF Chain-length facto 99.8 2.1E-19 4.6E-24 172.4 16.8 197 38-332 72-300 (399)
81 PRK09116 3-oxoacyl-(acyl carri 99.8 3.2E-19 7E-24 171.3 17.6 199 38-333 74-306 (405)
82 PRK06501 3-oxoacyl-(acyl carri 99.8 3E-19 6.6E-24 172.7 16.7 164 75-334 153-321 (425)
83 PRK08439 3-oxoacyl-(acyl carri 99.8 5.2E-19 1.1E-23 170.2 17.7 199 37-333 72-303 (406)
84 PRK06519 3-oxoacyl-(acyl carri 99.8 2.5E-18 5.5E-23 164.2 17.0 194 37-332 73-309 (398)
85 PRK07967 3-oxoacyl-(acyl carri 99.8 2.9E-18 6.2E-23 164.5 16.7 196 38-332 72-301 (406)
86 PRK09352 3-oxoacyl-(acyl carri 99.8 1.2E-17 2.6E-22 155.8 13.8 109 22-131 37-145 (319)
87 PRK07204 3-oxoacyl-(acyl carri 99.7 2.5E-17 5.4E-22 154.5 15.3 98 34-131 49-147 (329)
88 PRK06147 3-oxoacyl-(acyl carri 99.7 2.2E-17 4.9E-22 155.6 14.9 190 35-332 63-264 (348)
89 TIGR02813 omega_3_PfaA polyket 99.7 1.5E-17 3.3E-22 186.1 15.8 191 39-331 95-344 (2582)
90 TIGR00748 HMG_CoA_syn_Arc hydr 99.7 2.4E-17 5.1E-22 155.4 14.5 98 33-130 46-143 (345)
91 CHL00203 fabH 3-oxoacyl-acyl-c 99.7 3.4E-17 7.3E-22 153.4 15.1 109 21-131 35-143 (326)
92 PRK07515 3-oxoacyl-(acyl carri 99.7 3.1E-17 6.7E-22 156.3 14.6 94 36-131 94-187 (372)
93 PRK09258 3-oxoacyl-(acyl carri 99.7 3.1E-17 6.7E-22 154.4 14.5 99 33-131 57-155 (338)
94 PRK12879 3-oxoacyl-(acyl carri 99.7 2.9E-17 6.3E-22 153.7 14.1 98 33-131 49-146 (325)
95 TIGR02845 spore_V_AD stage V s 99.7 3.1E-17 6.6E-22 148.9 13.6 92 34-132 47-138 (327)
96 PRK06816 3-oxoacyl-(acyl carri 99.7 4.5E-17 9.8E-22 155.4 15.1 96 35-131 61-156 (378)
97 PRK12880 3-oxoacyl-(acyl carri 99.7 4.6E-17 1E-21 153.7 14.5 98 33-131 56-153 (353)
98 TIGR00747 fabH 3-oxoacyl-(acyl 99.7 3.2E-17 6.9E-22 153.0 12.8 109 22-131 36-144 (318)
99 cd00830 KAS_III Ketoacyl-acyl 99.7 9.5E-17 2.1E-21 149.8 15.1 99 32-131 45-143 (320)
100 PRK08304 stage V sporulation p 99.7 6.6E-17 1.4E-21 147.1 13.0 92 34-132 53-144 (337)
101 PLN02326 3-oxoacyl-[acyl-carri 99.7 1.1E-16 2.3E-21 152.8 14.0 107 23-131 82-188 (379)
102 COG3321 Polyketide synthase mo 99.7 2.6E-16 5.6E-21 166.2 18.0 211 18-329 63-310 (1061)
103 PRK04262 hypothetical protein; 99.7 1.7E-16 3.6E-21 149.9 14.7 96 33-128 47-142 (347)
104 cd00827 init_cond_enzymes "ini 99.7 1.5E-16 3.3E-21 148.7 13.1 108 18-131 34-141 (324)
105 PRK05963 3-oxoacyl-(acyl carri 99.7 4.7E-16 1E-20 145.6 13.8 97 33-131 48-144 (326)
106 TIGR01835 HMG-CoA-S_prok 3-hyd 99.7 1E-15 2.2E-20 146.0 16.2 110 15-129 30-139 (379)
107 cd00831 CHS_like Chalcone and 99.7 8.4E-16 1.8E-20 145.9 12.5 95 36-131 84-179 (361)
108 PRK06840 hypothetical protein; 99.6 3E-15 6.5E-20 141.0 15.1 98 33-131 49-148 (339)
109 PLN03173 chalcone synthase; Pr 99.6 6.6E-15 1.4E-19 140.4 15.4 93 38-131 103-196 (391)
110 PLN03169 chalcone synthase fam 99.6 5.9E-15 1.3E-19 141.1 14.9 97 34-131 103-200 (391)
111 PLN03172 chalcone synthase fam 99.6 8.4E-15 1.8E-19 139.8 15.5 93 38-131 103-196 (393)
112 PLN03170 chalcone synthase; Pr 99.6 7E-15 1.5E-19 140.8 14.1 94 37-131 106-200 (401)
113 PLN03171 chalcone synthase-lik 99.6 8.4E-15 1.8E-19 140.3 14.2 95 36-131 107-202 (399)
114 PRK09185 3-oxoacyl-(acyl carri 99.6 1.4E-14 3.1E-19 138.9 15.2 150 75-334 138-292 (392)
115 PLN03168 chalcone synthase; Pr 99.6 2.4E-14 5.3E-19 136.6 16.3 95 36-131 100-195 (389)
116 PLN02577 hydroxymethylglutaryl 99.6 1.5E-14 3.3E-19 139.4 14.3 98 33-131 49-151 (459)
117 PRK12404 stage V sporulation p 99.6 1E-14 2.2E-19 132.1 11.8 85 35-126 52-136 (334)
118 PLN02854 3-ketoacyl-CoA syntha 99.5 4.2E-13 9E-18 130.7 16.7 92 38-130 189-281 (521)
119 COG3425 PksG 3-hydroxy-3-methy 99.5 4.7E-13 1E-17 123.8 14.1 98 34-131 48-145 (377)
120 PLN02932 3-ketoacyl-CoA syntha 99.5 1.9E-13 4.1E-18 132.2 11.8 94 37-131 148-242 (478)
121 PLN02377 3-ketoacyl-CoA syntha 99.5 8.4E-13 1.8E-17 128.5 13.4 95 36-131 171-266 (502)
122 TIGR01833 HMG-CoA-S_euk 3-hydr 99.4 2.4E-12 5.2E-17 124.1 14.0 108 17-128 33-145 (454)
123 COG3424 BcsA Predicted naringe 99.4 1.8E-12 3.9E-17 115.3 11.6 95 36-131 75-170 (356)
124 PLN02192 3-ketoacyl-CoA syntha 99.4 2.2E-12 4.8E-17 125.4 11.9 93 37-130 176-269 (511)
125 PF00109 ketoacyl-synt: Beta-k 99.4 3.8E-12 8.2E-17 114.8 10.3 93 37-131 87-208 (254)
126 PF00195 Chal_sti_synt_N: Chal 99.3 2.5E-11 5.4E-16 106.2 11.3 95 36-131 99-194 (226)
127 PLN00415 3-ketoacyl-CoA syntha 99.3 3E-11 6.5E-16 115.8 11.6 97 34-131 130-228 (466)
128 KOG1202 Animal-type fatty acid 99.2 3.3E-11 7E-16 122.5 7.8 190 38-330 88-304 (2376)
129 PF08392 FAE1_CUT1_RppA: FAE1/ 99.1 3.1E-10 6.8E-15 102.1 11.2 93 38-131 84-177 (290)
130 PF07451 SpoVAD: Stage V sporu 99.1 3.6E-10 7.8E-15 101.1 8.9 82 38-126 52-133 (329)
131 PF02803 Thiolase_C: Thiolase, 98.9 5.9E-10 1.3E-14 88.6 3.3 57 282-338 2-58 (123)
132 PF01154 HMG_CoA_synt_N: Hydro 98.6 1.1E-07 2.4E-12 79.5 7.3 108 19-129 38-149 (174)
133 PF08545 ACP_syn_III: 3-Oxoacy 98.3 1.7E-06 3.6E-11 63.8 5.2 39 93-131 1-39 (80)
134 COG0183 PaaJ Acetyl-CoA acetyl 97.6 1.1E-05 2.4E-10 77.4 -0.6 102 227-338 188-303 (392)
135 KOG1393 Hydroxymethylglutaryl- 96.8 0.039 8.5E-07 51.5 13.5 112 13-128 39-155 (462)
136 PF02801 Ketoacyl-synt_C: Beta 96.7 0.0024 5.3E-08 50.6 4.7 48 284-331 1-54 (119)
137 PF13723 Ketoacyl-synt_2: Beta 95.6 0.1 2.2E-06 45.8 9.5 89 36-131 33-145 (218)
138 PF08541 ACP_syn_III_C: 3-Oxoa 94.1 0.072 1.6E-06 39.7 3.9 72 49-127 1-78 (90)
139 PRK08257 acetyl-CoA acetyltran 93.0 0.44 9.5E-06 47.4 8.5 109 13-126 266-383 (498)
140 cd00829 SCP-x_thiolase Thiolas 91.1 1.5 3.3E-05 41.7 9.5 53 13-65 225-277 (375)
141 COG1214 Inactive homolog of me 90.9 0.97 2.1E-05 39.8 7.3 81 35-123 35-115 (220)
142 TIGR00748 HMG_CoA_syn_Arc hydr 90.6 0.7 1.5E-05 43.6 6.6 83 37-126 206-294 (345)
143 PRK06816 3-oxoacyl-(acyl carri 90.4 1.3 2.9E-05 42.3 8.4 82 40-128 273-365 (378)
144 PRK06064 acetyl-CoA acetyltran 88.7 4.7 0.0001 38.6 10.8 52 13-64 232-283 (389)
145 PRK05963 3-oxoacyl-(acyl carri 88.5 1.5 3.2E-05 40.9 6.9 83 39-126 227-313 (326)
146 PRK07204 3-oxoacyl-(acyl carri 88.2 1.6 3.5E-05 40.7 7.0 82 40-126 231-316 (329)
147 cd00825 decarbox_cond_enzymes 87.7 4.6 0.0001 37.4 9.9 77 38-116 204-286 (332)
148 PRK06158 thiolase; Provisional 87.7 3.4 7.3E-05 39.7 9.0 52 12-64 228-279 (384)
149 PF02801 Ketoacyl-synt_C: Beta 87.5 1.1 2.4E-05 35.2 4.7 100 16-117 3-111 (119)
150 CHL00203 fabH 3-oxoacyl-acyl-c 87.4 1.5 3.3E-05 40.9 6.3 81 41-126 228-312 (326)
151 PRK07937 lipid-transfer protei 86.6 4.5 9.8E-05 38.3 9.1 104 12-126 224-335 (352)
152 PRK04262 hypothetical protein; 86.5 1.4 3.1E-05 41.5 5.6 81 39-126 209-295 (347)
153 PRK12879 3-oxoacyl-(acyl carri 85.7 2.6 5.6E-05 39.2 6.9 78 41-126 227-311 (325)
154 cd00327 cond_enzymes Condensin 85.5 7.4 0.00016 34.4 9.6 89 37-126 143-243 (254)
155 PLN02326 3-oxoacyl-[acyl-carri 84.9 3.2 6.9E-05 39.7 7.2 81 41-126 282-366 (379)
156 PRK09185 3-oxoacyl-(acyl carri 84.8 5.9 0.00013 38.1 9.1 100 13-117 236-341 (392)
157 TIGR00747 fabH 3-oxoacyl-(acyl 84.3 2.1 4.5E-05 39.7 5.6 80 40-126 220-305 (318)
158 PRK09258 3-oxoacyl-(acyl carri 84.1 3.9 8.4E-05 38.3 7.4 82 39-127 239-326 (338)
159 PRK06840 hypothetical protein; 83.7 3.6 7.8E-05 38.5 7.0 43 41-88 239-281 (339)
160 PRK07314 3-oxoacyl-(acyl carri 83.6 4.4 9.6E-05 39.1 7.7 100 15-117 254-360 (411)
161 cd00830 KAS_III Ketoacyl-acyl 83.3 3.2 6.9E-05 38.4 6.4 46 39-89 223-268 (320)
162 TIGR03150 fabF beta-ketoacyl-a 82.3 6 0.00013 38.0 8.0 100 15-117 253-359 (407)
163 PRK14691 3-oxoacyl-(acyl carri 82.0 11 0.00023 35.7 9.4 100 15-117 184-289 (342)
164 TIGR03725 bact_YeaZ universal 80.7 1.7 3.7E-05 37.7 3.3 68 35-107 31-98 (202)
165 PRK06147 3-oxoacyl-(acyl carri 80.7 5.5 0.00012 37.7 7.0 88 39-127 234-330 (348)
166 cd00834 KAS_I_II Beta-ketoacyl 80.6 9.1 0.0002 36.6 8.7 79 39-118 275-360 (406)
167 COG0332 FabH 3-oxoacyl-[acyl-c 80.3 1.7 3.7E-05 40.6 3.3 85 37-126 221-309 (323)
168 PRK09352 3-oxoacyl-(acyl carri 80.2 5 0.00011 37.1 6.5 44 41-89 221-264 (319)
169 PRK07515 3-oxoacyl-(acyl carri 80.1 4.3 9.2E-05 38.7 6.1 81 39-126 271-358 (372)
170 PRK09050 beta-ketoadipyl CoA t 79.8 6 0.00013 38.2 7.1 97 15-123 280-384 (401)
171 PRK06519 3-oxoacyl-(acyl carri 79.5 6.3 0.00014 38.0 7.1 77 40-118 281-359 (398)
172 cd00832 CLF Chain-length facto 79.1 12 0.00026 36.0 8.9 78 38-117 269-352 (399)
173 PRK12578 acetyl-CoA acetyltran 78.7 2.9 6.3E-05 40.1 4.5 52 13-64 231-282 (385)
174 PRK05952 3-oxoacyl-(acyl carri 77.7 12 0.00026 35.9 8.3 98 16-118 233-336 (381)
175 TIGR01930 AcCoA-C-Actrans acet 77.6 8.3 0.00018 37.0 7.3 94 15-123 269-371 (386)
176 PRK13359 beta-ketoadipyl CoA t 76.7 8.6 0.00019 37.1 7.1 95 15-123 279-383 (400)
177 cd00828 elong_cond_enzymes "el 76.4 11 0.00024 36.2 7.8 79 38-117 273-358 (407)
178 PTZ00050 3-oxoacyl-acyl carrie 76.0 13 0.00028 36.1 8.2 99 16-117 262-369 (421)
179 TIGR02430 pcaF beta-ketoadipyl 75.0 8 0.00017 37.4 6.4 95 14-122 278-382 (400)
180 PRK06289 acetyl-CoA acetyltran 74.8 27 0.00058 33.7 10.0 51 15-65 247-302 (403)
181 PRK08256 lipid-transfer protei 74.7 22 0.00048 34.1 9.4 52 13-64 235-289 (391)
182 COG0304 FabB 3-oxoacyl-(acyl-c 74.7 10 0.00022 36.8 6.9 47 16-64 255-301 (412)
183 smart00825 PKS_KS Beta-ketoacy 74.7 22 0.00047 34.3 9.5 80 38-118 278-367 (424)
184 PRK06333 3-oxoacyl-(acyl carri 74.7 12 0.00026 36.2 7.7 99 16-117 267-371 (424)
185 cd00833 PKS polyketide synthas 74.4 18 0.0004 34.7 8.8 103 15-120 257-369 (421)
186 PLN02836 3-oxoacyl-[acyl-carri 72.9 22 0.00049 34.6 9.0 100 15-117 277-385 (437)
187 PRK12880 3-oxoacyl-(acyl carri 72.5 11 0.00024 35.7 6.6 79 40-123 243-323 (353)
188 PRK09051 beta-ketothiolase; Pr 71.7 19 0.00042 34.6 8.1 92 15-122 275-376 (394)
189 PRK07910 3-oxoacyl-(acyl carri 71.6 18 0.00039 35.1 8.0 98 16-117 265-368 (418)
190 PRK06066 acetyl-CoA acetyltran 71.4 30 0.00065 33.2 9.3 53 12-65 230-284 (385)
191 PRK07103 polyketide beta-ketoa 70.7 20 0.00044 34.6 8.1 96 15-117 261-362 (410)
192 PRK08722 3-oxoacyl-(acyl carri 70.7 29 0.00064 33.6 9.2 78 39-117 278-363 (414)
193 PF00814 Peptidase_M22: Glycop 69.4 3.2 6.9E-05 37.8 2.1 65 38-111 30-98 (268)
194 PLN02787 3-oxoacyl-[acyl-carri 69.2 15 0.00032 37.0 6.9 76 41-117 407-488 (540)
195 PRK05790 putative acyltransfer 68.9 18 0.00038 34.8 7.2 76 41-123 293-376 (393)
196 PRK09116 3-oxoacyl-(acyl carri 67.8 27 0.00059 33.7 8.3 94 17-117 257-356 (405)
197 PRK07851 acetyl-CoA acetyltran 67.6 21 0.00046 34.5 7.5 42 15-63 286-327 (406)
198 PRK09052 acetyl-CoA acetyltran 67.6 18 0.00038 35.0 6.9 42 16-64 281-322 (399)
199 PRK07516 acetyl-CoA acetyltran 66.7 10 0.00022 36.4 5.1 51 13-64 235-285 (389)
200 TIGR00329 gcp_kae1 metallohydr 66.2 6.7 0.00015 36.3 3.6 49 38-86 49-101 (305)
201 PTZ00455 3-ketoacyl-CoA thiola 66.1 7.7 0.00017 38.0 4.1 50 14-64 285-334 (438)
202 PRK08142 acetyl-CoA acetyltran 64.6 11 0.00025 36.1 4.9 50 13-64 231-280 (388)
203 PRK07855 lipid-transfer protei 64.3 9.1 0.0002 36.7 4.2 53 12-64 235-291 (386)
204 TIGR03723 bact_gcp putative gl 63.8 8 0.00017 36.0 3.6 59 37-95 49-107 (314)
205 PRK06157 acetyl-CoA acetyltran 63.5 9.8 0.00021 36.7 4.3 52 13-64 238-293 (398)
206 PRK06501 3-oxoacyl-(acyl carri 62.7 24 0.00052 34.3 6.9 78 40-118 290-374 (425)
207 PRK06690 acetyl-CoA acetyltran 61.6 26 0.00056 33.4 6.7 25 40-64 259-283 (361)
208 PRK06025 acetyl-CoA acetyltran 61.1 23 0.00051 34.4 6.4 68 42-116 318-394 (417)
209 PRK09604 UGMP family protein; 59.1 12 0.00025 35.3 3.8 49 38-86 52-104 (332)
210 PLN03169 chalcone synthase fam 58.1 31 0.00067 33.2 6.7 46 41-89 283-328 (391)
211 PRK07850 acetyl-CoA acetyltran 57.5 46 0.00099 32.0 7.7 94 15-122 268-369 (387)
212 PRK08131 acetyl-CoA acetyltran 56.8 54 0.0012 31.7 8.1 42 16-64 280-321 (401)
213 PRK08304 stage V sporulation p 56.0 8.3 0.00018 36.1 2.2 26 305-330 61-86 (337)
214 PRK14878 UGMP family protein; 55.8 13 0.00028 34.7 3.6 48 39-86 46-97 (323)
215 KOG1394 3-oxoacyl-(acyl-carrie 54.4 9.8 0.00021 35.8 2.4 25 40-64 302-326 (440)
216 PF01890 CbiG_C: Cobalamin syn 53.2 25 0.00055 27.7 4.3 59 15-86 1-59 (121)
217 cd00831 CHS_like Chalcone and 53.1 32 0.00069 32.5 5.8 45 39-88 259-305 (361)
218 TIGR03285 methan_mark_14 putat 52.6 12 0.00025 35.3 2.6 53 12-64 38-92 (445)
219 PLN03170 chalcone synthase; Pr 52.2 47 0.001 32.1 6.9 46 39-89 281-326 (401)
220 PF02803 Thiolase_C: Thiolase, 50.6 13 0.00028 29.6 2.2 25 41-65 24-48 (123)
221 PRK07661 acetyl-CoA acetyltran 50.6 97 0.0021 29.8 8.7 42 16-64 273-314 (391)
222 PLN03168 chalcone synthase; Pr 50.4 13 0.00028 35.7 2.7 28 305-332 106-133 (389)
223 PTZ00340 O-sialoglycoprotein e 49.4 20 0.00043 33.9 3.7 55 38-96 50-108 (345)
224 COG0533 QRI7 Metal-dependent p 49.3 25 0.00055 33.0 4.3 55 38-97 51-110 (342)
225 TIGR03722 arch_KAE1 universal 49.2 16 0.00035 34.1 3.0 47 40-86 48-98 (322)
226 PF03880 DbpA: DbpA RNA bindin 48.0 8.9 0.00019 27.3 0.9 35 302-336 13-47 (74)
227 PRK06059 lipid-transfer protei 47.5 17 0.00037 35.0 3.0 44 285-328 6-51 (399)
228 PF09663 Amido_AtzD_TrzD: Amid 46.9 28 0.0006 32.6 4.1 45 285-329 109-160 (365)
229 KOG2708 Predicted metalloprote 46.3 14 0.0003 32.7 1.9 25 306-334 55-79 (336)
230 TIGR02445 fadA fatty oxidation 45.8 1.4E+02 0.003 28.7 8.9 95 15-123 263-368 (385)
231 PRK06445 acetyl-CoA acetyltran 45.6 66 0.0014 30.9 6.8 76 41-123 294-377 (394)
232 TIGR02813 omega_3_PfaA polyket 45.2 83 0.0018 38.0 8.4 101 16-119 294-404 (2582)
233 PLN03173 chalcone synthase; Pr 45.0 16 0.00035 35.1 2.4 27 305-331 107-133 (391)
234 PRK05656 acetyl-CoA acetyltran 44.1 64 0.0014 31.0 6.4 24 41-64 293-316 (393)
235 PRK08242 acetyl-CoA acetyltran 44.0 55 0.0012 31.6 5.9 23 42-64 303-325 (402)
236 PRK06633 acetyl-CoA acetyltran 43.5 25 0.00054 33.8 3.5 25 40-64 291-315 (392)
237 PRK06205 acetyl-CoA acetyltran 43.1 55 0.0012 31.6 5.8 75 41-123 300-386 (404)
238 PRK06365 acetyl-CoA acetyltran 42.9 38 0.00083 33.0 4.7 27 39-65 293-321 (430)
239 PLN03172 chalcone synthase fam 42.9 20 0.00043 34.6 2.7 27 305-331 107-133 (393)
240 PRK06065 acetyl-CoA acetyltran 42.8 43 0.00094 32.2 5.0 52 12-64 236-289 (392)
241 PRK08313 acetyl-CoA acetyltran 42.8 38 0.00082 32.5 4.6 49 15-64 232-282 (386)
242 PLN02192 3-ketoacyl-CoA syntha 42.7 19 0.00041 35.9 2.5 27 305-332 181-207 (511)
243 PLN03171 chalcone synthase-lik 42.3 20 0.00043 34.6 2.6 28 305-332 113-140 (399)
244 PLN02577 hydroxymethylglutaryl 42.1 17 0.00036 35.9 2.0 29 304-332 57-85 (459)
245 PLN02287 3-ketoacyl-CoA thiola 42.1 42 0.00091 33.0 4.8 24 41-64 333-356 (452)
246 PLN02644 acetyl-CoA C-acetyltr 41.9 80 0.0017 30.4 6.7 23 42-64 294-316 (394)
247 PRK07027 cobalamin biosynthesi 41.6 46 0.00099 26.4 4.2 59 16-87 4-62 (126)
248 PRK06954 acetyl-CoA acetyltran 41.3 78 0.0017 30.5 6.5 24 40-63 296-319 (397)
249 PRK08439 3-oxoacyl-(acyl carri 41.2 1.9E+02 0.0042 27.8 9.3 76 39-117 274-356 (406)
250 PF08392 FAE1_CUT1_RppA: FAE1/ 41.2 22 0.00047 32.7 2.5 25 305-329 88-112 (290)
251 PF00195 Chal_sti_synt_N: Chal 40.7 21 0.00045 31.6 2.2 28 305-332 105-132 (226)
252 cd00827 init_cond_enzymes "ini 40.4 72 0.0016 29.3 6.0 44 38-87 222-266 (324)
253 PRK07108 acetyl-CoA acetyltran 39.8 28 0.0006 33.5 3.1 24 40-63 291-314 (392)
254 PRK09605 bifunctional UGMP fam 39.6 26 0.00057 35.1 3.1 31 39-69 50-80 (535)
255 PF09887 DUF2114: Uncharacteri 39.4 26 0.00057 33.1 2.8 53 12-64 40-95 (448)
256 cd00751 thiolase Thiolase are 39.2 23 0.0005 33.9 2.5 28 304-331 26-53 (386)
257 PRK12404 stage V sporulation p 39.1 1.4E+02 0.0031 28.0 7.4 89 41-131 208-312 (334)
258 PRK09268 acetyl-CoA acetyltran 38.5 2.1E+02 0.0046 27.9 9.1 26 40-65 310-335 (427)
259 PLN02932 3-ketoacyl-CoA syntha 37.0 25 0.00055 34.8 2.4 28 305-332 153-180 (478)
260 PLN02377 3-ketoacyl-CoA syntha 36.3 26 0.00056 34.9 2.3 27 305-332 177-203 (502)
261 PF14574 DUF4445: Domain of un 35.2 65 0.0014 31.3 4.9 75 34-115 299-377 (412)
262 PF04422 FrhB_FdhB_N: Coenzyme 35.0 61 0.0013 23.5 3.7 31 96-126 14-44 (82)
263 KOG2708 Predicted metalloprote 34.7 43 0.00093 29.7 3.2 29 39-67 51-79 (336)
264 PRK08235 acetyl-CoA acetyltran 33.5 30 0.00065 33.3 2.3 28 305-332 31-58 (393)
265 TIGR02714 amido_AtzD_TrzD ring 33.3 42 0.00092 31.3 3.0 49 15-64 110-159 (366)
266 TIGR02845 spore_V_AD stage V s 33.0 1.8E+02 0.0039 27.3 7.1 89 41-131 204-307 (327)
267 KOG2707 Predicted metalloprote 32.5 76 0.0017 30.0 4.6 47 41-87 86-136 (405)
268 PRK12342 hypothetical protein; 32.0 1.3E+02 0.0028 27.2 5.9 42 42-88 98-139 (254)
269 COG0533 QRI7 Metal-dependent p 31.5 43 0.00093 31.5 2.8 26 305-334 55-80 (342)
270 COG3360 Uncharacterized conser 31.2 49 0.0011 23.2 2.3 27 303-329 18-44 (71)
271 PRK08170 acetyl-CoA acetyltran 30.7 35 0.00076 33.2 2.3 27 305-331 32-58 (426)
272 PF12368 DUF3650: Protein of u 30.7 53 0.0012 18.8 2.0 16 173-188 8-23 (28)
273 PRK06504 acetyl-CoA acetyltran 30.5 1.4E+02 0.0031 28.7 6.3 77 39-122 288-372 (390)
274 PF07451 SpoVAD: Stage V sporu 30.1 63 0.0014 29.9 3.6 88 42-131 206-309 (329)
275 COG1541 PaaK Coenzyme F390 syn 29.0 4E+02 0.0086 26.2 9.0 92 37-131 114-224 (438)
276 PF07736 CM_1: Chorismate muta 28.7 1.1E+02 0.0023 24.2 4.2 51 43-95 24-74 (118)
277 PRK08947 fadA 3-ketoacyl-CoA t 28.1 1.9E+02 0.004 27.8 6.7 97 15-123 265-370 (387)
278 TIGR01796 CM_mono_aroH monofun 27.2 1.9E+02 0.0041 22.7 5.3 49 45-95 26-74 (117)
279 PF09663 Amido_AtzD_TrzD: Amid 26.9 69 0.0015 30.1 3.3 50 14-64 108-158 (365)
280 PRK06366 acetyl-CoA acetyltran 26.9 47 0.001 31.9 2.4 26 305-330 31-56 (388)
281 COG2971 Predicted N-acetylgluc 26.8 89 0.0019 28.9 4.0 84 35-128 45-128 (301)
282 PRK03359 putative electron tra 26.7 1.8E+02 0.0039 26.2 6.0 44 40-88 99-142 (256)
283 PRK05788 cobalamin biosynthesi 26.6 96 0.0021 28.9 4.3 61 14-87 193-253 (315)
284 PLN02854 3-ketoacyl-CoA syntha 26.5 2.6E+02 0.0057 28.1 7.5 81 41-126 387-480 (521)
285 KOG1406 Peroxisomal 3-ketoacyl 26.3 69 0.0015 29.0 3.1 31 38-68 271-301 (408)
286 PLN00415 3-ketoacyl-CoA syntha 25.8 37 0.00081 33.4 1.5 27 305-332 139-165 (466)
287 PRK13410 molecular chaperone D 25.6 2.2E+02 0.0047 29.6 7.1 48 38-87 308-355 (668)
288 PRK08963 fadI 3-ketoacyl-CoA t 25.2 81 0.0018 30.7 3.7 24 41-64 311-334 (428)
289 COG3473 Maleate cis-trans isom 24.8 1.8E+02 0.004 25.4 5.2 71 35-115 44-118 (238)
290 PRK05183 hscA chaperone protei 23.7 2.9E+02 0.0062 28.4 7.5 45 41-87 311-355 (616)
291 PLN03184 chloroplast Hsp70; Pr 23.5 2E+02 0.0043 30.0 6.3 46 40-87 347-392 (673)
292 PTZ00186 heat shock 70 kDa pre 23.3 2.4E+02 0.0053 29.2 6.9 46 40-87 335-380 (657)
293 TIGR01833 HMG-CoA-S_euk 3-hydr 23.0 55 0.0012 32.2 2.0 25 304-328 54-78 (454)
294 TIGR02446 FadI fatty oxidation 22.8 70 0.0015 31.2 2.8 23 42-64 314-336 (430)
295 TIGR02714 amido_AtzD_TrzD ring 22.7 67 0.0014 30.1 2.3 43 286-328 111-160 (366)
296 PRK07801 acetyl-CoA acetyltran 22.5 59 0.0013 31.0 2.2 24 304-327 30-53 (382)
297 TIGR01991 HscA Fe-S protein as 22.2 3.5E+02 0.0076 27.6 7.8 45 41-87 295-339 (599)
298 PRK13690 hypothetical protein; 21.8 2.5E+02 0.0054 23.8 5.3 72 10-87 23-95 (184)
299 TIGR01702 CO_DH_cata carbon-mo 21.1 1.7E+02 0.0038 29.9 5.1 56 63-118 509-564 (621)
300 KOG2707 Predicted metalloprote 21.0 93 0.002 29.4 3.0 22 305-326 87-108 (405)
301 PRK09585 anmK anhydro-N-acetyl 20.6 96 0.0021 29.6 3.1 26 305-330 74-99 (365)
302 COG2086 FixA Electron transfer 20.4 2.8E+02 0.006 25.1 5.8 44 40-88 98-141 (260)
303 cd01915 CODH Carbon monoxide d 20.3 1.5E+02 0.0033 30.3 4.5 55 64-118 502-556 (613)
304 cd02185 AroH Chorismate mutase 20.1 3.4E+02 0.0073 21.4 5.4 49 45-95 26-74 (117)
No 1
>PRK09051 beta-ketothiolase; Provisional
Probab=100.00 E-value=2e-57 Score=432.73 Aligned_cols=325 Identities=41% Similarity=0.612 Sum_probs=279.3
Q ss_pred CCCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCC
Q 019555 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS 89 (339)
Q Consensus 11 ~~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~ 89 (339)
||++|+|||++||||+|+.+.+.++++.+|+.+|+++||+++|+++++||.+++|++.+... ..+.++.++..+|++++
T Consensus 1 ~m~~v~Ivg~~rtp~g~~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~ 80 (394)
T PRK09051 1 MMREVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQE 80 (394)
T ss_pred CCCcEEEEecccCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCC
Confidence 45799999999999999878888999999999999999999999999999999999887553 35677888888899756
Q ss_pred cceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHH
Q 019555 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (339)
Q Consensus 90 ~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (339)
+|.++|+++|+|++.++..|+++|++|.+|+|||+|+|++|+.|......+.+..++.....+.. ...+.+++....|+
T Consensus 81 ~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 159 (394)
T PRK09051 81 TPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMM-VGALHDPFGTIHMG 159 (394)
T ss_pred CceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhh-cccccccccCCCHH
Confidence 89999999999999999999999999999999999999999876522111222122211111111 11233444445699
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCC
Q 019555 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFK 248 (339)
Q Consensus 170 ~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~ 248 (339)
+.+++|+++||++||++++|++++|+|+..|+.+++|+++|+|+.+++++++ .+++||+..|+ +|.|++++++|+|+
T Consensus 160 ~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~--~~~~~da~~r~~~t~e~v~~~~~v~~ 237 (394)
T PRK09051 160 VTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGE--VVFDTDEHVRADTTLEDLAKLKPVFK 237 (394)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCC--eEECCCCCCCCCCCHHHHcCCCCccc
Confidence 9999999999999999999999999999999999999999999998765444 66899999998 99999999999997
Q ss_pred CC-CccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEe
Q 019555 249 EG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEI 327 (339)
Q Consensus 249 ~~-g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~ 327 (339)
++ |++|++|||+++|||+|+||++++.+++++.+|+++|.|++....++.....++..+++++|+++|++++|||++|+
T Consensus 238 ~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~~ei 317 (394)
T PRK09051 238 KENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERAGLTVADLDVIEA 317 (394)
T ss_pred CCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCCcccccHHHHHHHHHHHcCCCHHHcCEEEe
Confidence 66 89999999999999999999999999999999989999999998777666678899999999999999999999999
Q ss_pred ecccccccccC
Q 019555 328 NEAFSVRNHVP 338 (339)
Q Consensus 328 hd~F~~~~l~~ 338 (339)
||||+++++++
T Consensus 318 ~d~f~~~~~~~ 328 (394)
T PRK09051 318 NEAFAAQACAV 328 (394)
T ss_pred cCccHHHHHHH
Confidence 99999998765
No 2
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=9.8e-58 Score=435.10 Aligned_cols=325 Identities=45% Similarity=0.645 Sum_probs=277.1
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~ 92 (339)
++|+|||++||||+|+.+.+++.++.+|+.+|+++||+++|+++++||.+++|+..+...+..+++.++..+|++.+.|.
T Consensus 2 ~~v~Ivg~~rTpfg~~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~ 81 (393)
T PRK08235 2 SKTVIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQT 81 (393)
T ss_pred CcEEEEecCcCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcce
Confidence 68999999999999988888899999999999999999999999999999999887644456778888999999756899
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHH
Q 019555 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (339)
Q Consensus 93 ~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (339)
++++.+|+|+..+|..|+++|++|.+|+|||+|+|++++.|......+.+..++.....+.....++.+++....|+..+
T Consensus 82 ~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 161 (393)
T PRK08235 82 ETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYG 161 (393)
T ss_pred eehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHHHH
Confidence 99999999999999999999999999999999999999876432111222222211111101112233333345799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCCCC
Q 019555 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGG 251 (339)
Q Consensus 173 ~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~g 251 (339)
++|+++||+++|++++|++++|+|+..|.+.++|+++|+|+++..+++.. .+++||+..|+ +|.|++++++|+++|+|
T Consensus 162 ~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~~p~g 240 (393)
T PRK08235 162 GEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDP-IVVAKDEAPRKDTTIEKLAKLKPVFDKTG 240 (393)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCc-eEeCCCCCCCCCCCHHHHhcCCCcccCCC
Confidence 99999999999999999999999999999999999999999987654433 56899999998 99999999999999889
Q ss_pred ccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 252 ~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
++|++|||+++|||+|+||++++.+++++.+|+++|.|++....++..+..++..+++++|+++||+++|||++|+||||
T Consensus 241 ~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~e~~d~f 320 (393)
T PRK08235 241 TITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDLFEINEAF 320 (393)
T ss_pred cEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhhhcchHHHHHHHHHHHhCCCHHHCCeehhcchh
Confidence 99999999999999999999999999999999889999888765555555677899999999999999999999999999
Q ss_pred ccccccC
Q 019555 332 SVRNHVP 338 (339)
Q Consensus 332 ~~~~l~~ 338 (339)
+++++++
T Consensus 321 ~~~~l~~ 327 (393)
T PRK08235 321 AAVALAS 327 (393)
T ss_pred HHHHHHH
Confidence 9998875
No 3
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=9.5e-57 Score=430.36 Aligned_cols=325 Identities=37% Similarity=0.513 Sum_probs=277.3
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~ 92 (339)
++|+|||+++|||+|+.+.++++++.+|+.+|+++||+++|+++++||.+++|++.+...++.+++.++..+|++++.|.
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~ 81 (404)
T PRK06205 2 RDAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPG 81 (404)
T ss_pred CceEEEEeecCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCce
Confidence 68999999999999988888999999999999999999999999999999999988776677788889999999756899
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccc---cc-cCCCcH
Q 019555 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLW---DV-YNDFGM 168 (339)
Q Consensus 93 ~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~ 168 (339)
++++.+|+|+..+|..|+++|++|.+++|||+|+|++++.+......+.+..++.....+.+..+.+. .. .....|
T Consensus 82 ~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 161 (404)
T PRK06205 82 MQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGM 161 (404)
T ss_pred eehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCCCH
Confidence 99999999999999999999999999999999999999866422112222112111111111011111 11 123567
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCC
Q 019555 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (339)
Q Consensus 169 ~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~ 247 (339)
+..+++|+++||+++|++++|++++|+|+..+.+.++|++||+|++++.+++++ .+++||+..|+ +|.|+++++||+|
T Consensus 162 ~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~ 240 (404)
T PRK06205 162 IETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDP-TVVDRDEHPRADTTLESLAKLRPIM 240 (404)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCc-eEeccCCCCCCCCCHHHHhcCCCcC
Confidence 778999999999999999999999999999999999999999999987654444 55899999999 9999999999999
Q ss_pred ---CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcE
Q 019555 248 ---KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDY 324 (339)
Q Consensus 248 ---~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~ 324 (339)
+|.|++|++|||+++|||+|+||++++.+++++.+|.++|.|++....++..+..+++.+++++|+++||+++|||+
T Consensus 241 ~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~ 320 (404)
T PRK06205 241 GKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRMGIGPVPATEKALARAGLTLDDIDL 320 (404)
T ss_pred ccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCccccccHHHHHHHHHHHcCCCHHHCCE
Confidence 46789999999999999999999999999999999989999999987766666678899999999999999999999
Q ss_pred EEeecccccccccC
Q 019555 325 YEINEAFSVRNHVP 338 (339)
Q Consensus 325 ~~~hd~F~~~~l~~ 338 (339)
+|+||||+++++++
T Consensus 321 ~ei~d~f~~~~l~~ 334 (404)
T PRK06205 321 IELNEAFAAQVLAV 334 (404)
T ss_pred eeeccHHHHHHHHH
Confidence 99999999998875
No 4
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.4e-57 Score=431.28 Aligned_cols=317 Identities=44% Similarity=0.615 Sum_probs=270.9
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~ 92 (339)
++|+|||+++|||+|+.+.++++++.+|+.+|+++||+|+|+++++||.+++|+..+...++++++++++.+|++.++|.
T Consensus 2 ~~v~Ivg~~rTp~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~ 81 (388)
T PRK06366 2 KDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTK 81 (388)
T ss_pred CcEEEEEcccCCcccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcc
Confidence 68999999999999988888889999999999999999999999999999999886544456778889999999756899
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhh-hhccCCC---CCccccccccccccccccCCCcH
Q 019555 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE-ARKGSRL---GHDTIVDGMLKDGLWDVYNDFGM 168 (339)
Q Consensus 93 ~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 168 (339)
++++++|+|++.++..|+++|++|++|+||++|+|++++.|..... .+++..+ ............++..|+....|
T Consensus 82 ~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~m 161 (388)
T PRK06366 82 YTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHM 161 (388)
T ss_pred eeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCccH
Confidence 9999999999999999999999999999999999999976643211 1111100 00000001111233344434568
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCC
Q 019555 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (339)
Q Consensus 169 ~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 248 (339)
++.+++||++||+|+|++++|++++|+|+.+||++++|+++|.|+.. ++.|+++|++|.|+|++++|+++
T Consensus 162 al~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~----------~~~d~~~r~~t~e~~~~s~~v~~ 231 (388)
T PRK06366 162 GVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFND----------LDRDEGIRKTTMEDLAKLPPAFD 231 (388)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccc----------cccccCcccCCHHHHhhCCCccC
Confidence 99999999999999999999999999999999998999999988751 56789999999999999999998
Q ss_pred CCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEee
Q 019555 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEIN 328 (339)
Q Consensus 249 ~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~h 328 (339)
|+|++|++|||+++|||+|+||+|++.+++++.+|.++|.|++....++.++...++.+++++|+++||+++|||++|+|
T Consensus 232 p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~ 311 (388)
T PRK06366 232 KNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPATRKLLEKQNKSIDYYDLVEHN 311 (388)
T ss_pred CCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhcccHHHHHHHHHHHcCCCHHHcceeecc
Confidence 88999999999999999999999999999999899779999999987776777778899999999999999999999999
Q ss_pred cccccccccCC
Q 019555 329 EAFSVRNHVPT 339 (339)
Q Consensus 329 d~F~~~~l~~~ 339 (339)
|||++++|+|+
T Consensus 312 daFa~~~l~~l 322 (388)
T PRK06366 312 EAFSIASIIVR 322 (388)
T ss_pred chhHHHHHHHH
Confidence 99999999874
No 5
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.6e-56 Score=424.91 Aligned_cols=325 Identities=44% Similarity=0.710 Sum_probs=278.6
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~ 92 (339)
++|+|||+++|||+|+.+.+++.++.+|+.+|+++||+++|+++++||.+++|+..+...++++++.+++.+|++..+|.
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~ 81 (393)
T PRK05656 2 QDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPA 81 (393)
T ss_pred CcEEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcce
Confidence 68999999999999988888899999999999999999999999999999999887654466788889999999744899
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHH
Q 019555 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (339)
Q Consensus 93 ~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (339)
++++++|+|+..+|..|+++|++|.+|++||+|+|++|..|+.....+.+..++..........+.+++.+....|++.+
T Consensus 82 ~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 161 (393)
T PRK05656 82 MTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITA 161 (393)
T ss_pred EEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHH
Confidence 99999999999999999999999999999999999999877532211222222211111111112333433345799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCCCC
Q 019555 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGG 251 (339)
Q Consensus 173 ~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~g 251 (339)
++||++||+|||++++|++++|+|+..|+..++|+++|+|+++++..+++ .+++.|+.+|+ ++.|.+.+++|+|.++|
T Consensus 162 ~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~-~~~~~D~~~r~~~~~e~l~~l~p~~~~~g 240 (393)
T PRK05656 162 ENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEP-LAFATDEQPRAGTTAESLAKLKPAFKKDG 240 (393)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCc-eEeccCCCCCCCCCHHHHhcCCCCcCCCC
Confidence 99999999999999999999999999986679999999999987765443 66889999999 99999999999998789
Q ss_pred ccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 252 ~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
.+|++|||+++|||+|+||++++.|++++.+++++|.|++.....+..++.++..+++++|+++|++++|||++|+||+|
T Consensus 241 ~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~e~~d~f 320 (393)
T PRK05656 241 SVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEAF 320 (393)
T ss_pred CEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCCcccchhHHHHHHHHHHHcCCCHHHCCEEEecCcc
Confidence 99999999999999999999999999999998899999999876666666788899999999999999999999999999
Q ss_pred ccccccC
Q 019555 332 SVRNHVP 338 (339)
Q Consensus 332 ~~~~l~~ 338 (339)
+++++++
T Consensus 321 ~~~~~~~ 327 (393)
T PRK05656 321 AAQSLAV 327 (393)
T ss_pred HHHHHHH
Confidence 9988765
No 6
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=5.4e-56 Score=421.23 Aligned_cols=325 Identities=41% Similarity=0.583 Sum_probs=277.2
Q ss_pred CCCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc
Q 019555 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (339)
Q Consensus 11 ~~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~ 90 (339)
|.++|+|||..||||+|+.+.+.+.++.+|+.+|++++|+++|+++++||.+++|+..+...++++++++++.+|++.++
T Consensus 1 ~~~~~~iv~~~Rtp~~~~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~ 80 (392)
T PRK06633 1 MTKPVYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEV 80 (392)
T ss_pred CCCCEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCc
Confidence 35689999999999999889999999999999999999999999999999999999887656778889999999998669
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHH
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (339)
|.++|+++|+|++.|+..|+++|++|++|++|++|+|++|..|.... .+....++.....+.+..+.+.+++....|++
T Consensus 81 p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (392)
T PRK06633 81 PGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSY-IRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGI 159 (392)
T ss_pred cchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchh-cccccccCcchhhhhhcccccccccCcchHHH
Confidence 99999999999999999999999999999999999999997663111 01111111100111111122223334457999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCC
Q 019555 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (339)
Q Consensus 171 ~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~ 249 (339)
.+++|+++||+|+|++++|++++|+|+..||+++.|+++|.|++++..++. .+++.|+.+|| .+.|.+.+++|+|+|
T Consensus 160 ~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~--~~~~~d~~~rp~~~~e~l~~l~p~~~~ 237 (392)
T PRK06633 160 TAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTT--SLFDHDETVRPDTSLEILSKLRPAFDK 237 (392)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCc--eeeccCCCCCCCCCHHHHccCCCccCC
Confidence 999999999999999999999999999999998889999999987543222 56899999999 888988889999988
Q ss_pred CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 250 ~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
+|++|++|||+++|||+++||++++.+++++.+|+++|.|++...+++..++.+++.+++++|+++||+++|||++|+||
T Consensus 238 ~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~Al~~AGl~p~DID~~ei~d 317 (392)
T PRK06633 238 NGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALSKAGWSVNDLEVIEVNE 317 (392)
T ss_pred CCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcchhchHHHHHHHHHHHHcCCCHHHcCeeehhh
Confidence 89999999999999999999999999999999998999999999877766667788999999999999999999999999
Q ss_pred ccccccccC
Q 019555 330 AFSVRNHVP 338 (339)
Q Consensus 330 ~F~~~~l~~ 338 (339)
+|+++++++
T Consensus 318 afa~~~l~~ 326 (392)
T PRK06633 318 AFAAQSIYV 326 (392)
T ss_pred HHHHHHHHH
Confidence 999998864
No 7
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=100.00 E-value=1.5e-55 Score=419.61 Aligned_cols=322 Identities=34% Similarity=0.506 Sum_probs=276.1
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCc
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~d-agl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~ 90 (339)
++|+|||++||||+|+.+.+.+.++.+|+.+|++++|++ +|+++++||.+++|++.+... ++++++.+++.+|++.++
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~v 81 (400)
T PRK13359 2 TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGV 81 (400)
T ss_pred CcEEEEeccCCCccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 579999999999999888899999999999999999996 699999999999999876543 578999999999998779
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCc-ccccc-----ccccccccccC
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD-TIVDG-----MLKDGLWDVYN 164 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~ 164 (339)
|.++|+++|+|++.|+..|+++|++|++|++|++|+|+||+.|+.... .+..++.. ..++. .....+.+++.
T Consensus 82 p~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
T PRK13359 82 PGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGK--AESAFSRQAEIFDTTIGWRFVNPLMKQLYG 159 (400)
T ss_pred ceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccc--ccccccCCcccccccccccccCCccccccc
Confidence 999999999999999999999999999999999999999998863211 11111110 00110 01123344455
Q ss_pred CCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcC
Q 019555 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKR-GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243 (339)
Q Consensus 165 ~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~-a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 243 (339)
...|++.+++++++||++||++++|++++|++ +..|| .++|++||+|++.+..++. +.++..|+.+|++|.|+++++
T Consensus 160 ~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~-~g~~~~ei~pv~~~~~~~~-~~~~~~De~~r~~t~e~l~~l 237 (400)
T PRK13359 160 VDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQA-DGTLAQEIVPVTIPQKKGD-PLVVSRDEHPRETTLEALAKL 237 (400)
T ss_pred cCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh-cCCCccceeeeeeccCCCC-ceeecCCCCCCCCCHHHHhcC
Confidence 56899999999999999999999999999996 55555 6999999999988654332 256899999999999999999
Q ss_pred CCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCc
Q 019555 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 244 ~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId 323 (339)
+|+|+|+|.+|+.|||+++|||+|+||++++.|++++.+|+++|.|++....++..++.++.++++++|+++||+++|||
T Consensus 238 ~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID 317 (400)
T PRK13359 238 KGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTLDQFD 317 (400)
T ss_pred CCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCCccchhHHHHHHHHHHHhCCCHHHcC
Confidence 99999889999999999999999999999999999999999999999998666666677889999999999999999999
Q ss_pred EEEeecccccccccC
Q 019555 324 YYEINEAFSVRNHVP 338 (339)
Q Consensus 324 ~~~~hd~F~~~~l~~ 338 (339)
++|+||+|+++++++
T Consensus 318 ~iei~dafa~~~l~~ 332 (400)
T PRK13359 318 VIELNEAFASQGLAV 332 (400)
T ss_pred cCccCcHhHHHHHHH
Confidence 999999999988764
No 8
>PRK05790 putative acyltransferase; Provisional
Probab=100.00 E-value=5e-55 Score=418.18 Aligned_cols=326 Identities=50% Similarity=0.713 Sum_probs=273.7
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~ 92 (339)
++|+|||+++|||+|..+.++++++.+|+.+|+++||+|+|+++++||.+++|+..+...++.+++.+...+|++.+.+.
T Consensus 2 ~~v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~ 81 (393)
T PRK05790 2 KDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPA 81 (393)
T ss_pred CceEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCce
Confidence 68999999999999987778889999999999999999999999999999999877644455666777788898755799
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHH
Q 019555 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (339)
Q Consensus 93 ~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (339)
++++.+|+|+..+|..|+++|++|.+|+|||+|+|++++.|......+.+..++.............++++....|++.+
T Consensus 82 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 161 (393)
T PRK05790 82 LTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITA 161 (393)
T ss_pred eeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHH
Confidence 99999999999999999999999999999999999998866421111111111110010111111222333346799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCCCC
Q 019555 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGG 251 (339)
Q Consensus 173 ~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~g 251 (339)
++||++||+++|++++|++++|+||.+||++++|+++++|+.+....+++ .++++|+..|. ++.|++.+++|+|++.|
T Consensus 162 ~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~-~~~~~d~~~~~~~~~e~l~~~~~v~~~~g 240 (393)
T PRK05790 162 ENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDP-VVVDTDEHPRPDTTAESLAKLRPAFDKDG 240 (393)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCc-eEecCCCCCCCCCCHHHHhCCCCccCCCC
Confidence 99999999999999999999999999999999999999999887654443 55788999998 99999999999999889
Q ss_pred ccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 252 ~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
++|++|||+++|||+|+||++++.+++++.+|.++|.|++.....+.....++..+++++|+++|++++|||++|+||+|
T Consensus 241 ~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f 320 (393)
T PRK05790 241 TVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADLDLIEINEAF 320 (393)
T ss_pred CEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCCccchhHHHHHHHHHHHcCCCHHHCCEEEeCcHH
Confidence 99999999999999999999999999999999789999999876555455567889999999999999999999999999
Q ss_pred ccccccCC
Q 019555 332 SVRNHVPT 339 (339)
Q Consensus 332 ~~~~l~~~ 339 (339)
++++++|+
T Consensus 321 ~~~~l~~~ 328 (393)
T PRK05790 321 AAQALAVE 328 (393)
T ss_pred HHHHHHHH
Confidence 99988763
No 9
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=5e-55 Score=415.14 Aligned_cols=319 Identities=31% Similarity=0.454 Sum_probs=273.1
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCcc
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVV 91 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~~ 91 (339)
++|+|||++||||+|+.+.++++++.||+.+|++++|+++|+++++||.+++|+...... ++++++.+.+..|++.++|
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP 81 (390)
T PRK06504 2 AEAYIVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVP 81 (390)
T ss_pred CceEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCc
Confidence 689999999999999888889999999999999999999999999999999998875332 4678888888889976899
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhh-hccCCCCCccccccccccccccccC--CCcH
Q 019555 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEA-RKGSRLGHDTIVDGMLKDGLWDVYN--DFGM 168 (339)
Q Consensus 92 ~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 168 (339)
.++|+++|+||+.|+..|+++|++|.+|++|++|+|+||+.|...... +.+..++.. . .+++.+++. ...+
T Consensus 82 ~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~ 155 (390)
T PRK06504 82 GTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHY-K-----SPGMEERYPGIQFSQ 155 (390)
T ss_pred eEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccc-c-----ccccccccCCCCCCH
Confidence 999999999999999999999999999999999999999877532211 111111110 0 022323221 2467
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCC
Q 019555 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (339)
Q Consensus 169 ~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~ 247 (339)
+..+++|+++||++||++++|++++|+|+..||++++|+++|+|++...+++.| ..+..||.+|+ +|.|++++++|++
T Consensus 156 ~~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~-~~~~~De~~r~~~t~e~l~~~~~~~ 234 (390)
T PRK06504 156 FTGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSG-EMHTVDEGIRFDATLEGIAGVKLIA 234 (390)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCc-eEEccCCCCCCCCCHHHHhcCCCCC
Confidence 788999999999999999999999999999999999999999999886654444 45789999999 9999999999997
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEe
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEI 327 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~ 327 (339)
++|++|++|||+++|||+|+||+|++.|++++.+|..+|.+++....++..+..++..+++++|+++|++++|||++|+
T Consensus 235 -~~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~Did~~Ei 313 (390)
T PRK06504 235 -EGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLYEV 313 (390)
T ss_pred -CCCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchhhhccHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 4589999999999999999999999999999988877999988877666566778889999999999999999999999
Q ss_pred ecccccccccCC
Q 019555 328 NEAFSVRNHVPT 339 (339)
Q Consensus 328 hd~F~~~~l~~~ 339 (339)
||||++++++|+
T Consensus 314 ~d~Fa~~~l~~~ 325 (390)
T PRK06504 314 NEAFASVPLAWL 325 (390)
T ss_pred cccchHHHHHHH
Confidence 999999998764
No 10
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=100.00 E-value=5.4e-55 Score=416.32 Aligned_cols=323 Identities=39% Similarity=0.548 Sum_probs=277.0
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHH-HcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCc
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALK-RANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~-dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~ 90 (339)
++|+|||++||||+|+.+.+++.++.+|+.+|++++|+ ++|+++++||.+++|++.+... ++++++.+++.+|++.++
T Consensus 2 ~~V~Ivg~~rTpfgk~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~v 81 (401)
T PRK09050 2 TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSV 81 (401)
T ss_pred CcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCC
Confidence 68999999999999988888899999999999999999 5899999999999999876544 467899999999998679
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCc-ccccc-----ccccccccccC
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD-TIVDG-----MLKDGLWDVYN 164 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~ 164 (339)
|.++|+++|+|++.|+..|+++|++|++|++|++|+|+||+.|+.....+ ..++.. ...+. .....+.+.+.
T Consensus 82 P~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (401)
T PRK09050 82 PGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKAD--SAFSRQAEIFDTTIGWRFVNPLMKAQYG 159 (401)
T ss_pred ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchh--hhcccCcccccccccccccCCccccccc
Confidence 99999999999999999999999999999999999999998875221111 111100 00110 00112233344
Q ss_pred CCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcC
Q 019555 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKL 243 (339)
Q Consensus 165 ~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~ 243 (339)
...|+..+++|+++||++||++|.++..+|+|+..+.+.++|+++|+|+++.+.++.. .++++|+.+|+ +|.|+++++
T Consensus 160 ~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~-~~~~~da~~r~~~t~e~l~~l 238 (401)
T PRK09050 160 VDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDP-VVVDRDEHPRPETTLEALAKL 238 (401)
T ss_pred cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCc-eeeCCCCCCCCCCCHHHHhcC
Confidence 5679999999999999999999999999999999999999999999999987644433 56889999998 999999999
Q ss_pred CCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCc
Q 019555 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 244 ~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId 323 (339)
+|+|+++|++|+.|||+++|||+|+||++++.+++++.+|.++|.|++.....+.....++.++++++|+++||+++|||
T Consensus 239 ~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId 318 (401)
T PRK09050 239 KPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMGIGPAPATRKLLARLGLTIDQFD 318 (401)
T ss_pred CCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHHCC
Confidence 99998889999999999999999999999999999998888999999998766655666788999999999999999999
Q ss_pred EEEeecccccccccC
Q 019555 324 YYEINEAFSVRNHVP 338 (339)
Q Consensus 324 ~~~~hd~F~~~~l~~ 338 (339)
++|+||||+++++++
T Consensus 319 ~~ei~D~f~~~~l~~ 333 (401)
T PRK09050 319 VIELNEAFAAQGLAV 333 (401)
T ss_pred ccccCcHhHHHHHHH
Confidence 999999999988765
No 11
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=9.5e-55 Score=414.71 Aligned_cols=320 Identities=36% Similarity=0.534 Sum_probs=272.3
Q ss_pred cCCCCceEEEeeccCcccc-cCCCCCCCCHHHHHHHHHHHHHHHc-CCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcC
Q 019555 9 SIKARDVCIVGVARTPMGG-FLGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANL-GQAPARQAALGAG 85 (339)
Q Consensus 9 ~~~~~~v~IvG~~~t~~~~-~~~~~~~~~~~~L~~~A~~~Al~da-gl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lg 85 (339)
+..|++|+|||++||||+| ..+.+++.++.+|+.+|+++||+++ |+++++||.+++|++.++.. +++.++.+...+|
T Consensus 2 ~~~m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~G 81 (399)
T PRK09052 2 SKQLQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAG 81 (399)
T ss_pred CCCCCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcC
Confidence 4556889999999999999 6788889999999999999999997 99999999999998876543 4567777778889
Q ss_pred CCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCC
Q 019555 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (339)
Q Consensus 86 l~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (339)
++..+|.++|+++|+|+..|+..|+.+|++|++|+|||+|+|++|+.|.... .+... ......... ....
T Consensus 82 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~------~~~~~---~~~~~~~~~-~~~~ 151 (399)
T PRK09052 82 LPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGN------KPSMS---PAIFARDEN-VGIA 151 (399)
T ss_pred CCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCc------ccccC---cchhccCCc-cccc
Confidence 9744899999999999999999999999999999999999999998763110 00000 000000000 0112
Q ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCC-----CCC---cceEeecCCCCcc-cC
Q 019555 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSG-----RGK---PFIIVDKDEGLEK-FD 236 (339)
Q Consensus 166 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~-----~~~---~~~~~~~~~~~r~-~~ 236 (339)
..|++.+++|+++||+++|+++.|++++|+|+..||++++|+++++|+++... ++. ...++..|+.+|+ .+
T Consensus 152 ~~~~~~a~~~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~ 231 (399)
T PRK09052 152 YGMGLTAEKVAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTS 231 (399)
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCC
Confidence 47999999999999999999999999999999999998899999999987542 121 1245789999999 99
Q ss_pred HHHHhcCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcC
Q 019555 237 AAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAG 316 (339)
Q Consensus 237 ~~~~~~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~ag 316 (339)
.|.|.+++|+|+++|++|++|||+++|||+|+||++++.+++++.+|+++|.|++.....+..++.+++.+++++|+++|
T Consensus 232 ~e~l~~l~p~f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~A~~~al~~Ag 311 (399)
T PRK09052 232 LEGLAKLKPVFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAG 311 (399)
T ss_pred HHHHhcCCCccCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCCccchhHHHHHHHHHHHcC
Confidence 99999999999888999999999999999999999999999999999889999999987777677788999999999999
Q ss_pred CCCCCCcEEEeecccccccccC
Q 019555 317 LEASQIDYYEINEAFSVRNHVP 338 (339)
Q Consensus 317 l~~~DId~~~~hd~F~~~~l~~ 338 (339)
++++|||++|+||+|+++++++
T Consensus 312 i~~~did~~ei~D~f~~~~l~~ 333 (399)
T PRK09052 312 LKQDDLDWIELNEAFAAQSLAV 333 (399)
T ss_pred CCHHHcCEEEeCcHHHHHHHHH
Confidence 9999999999999999998765
No 12
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=100.00 E-value=1e-54 Score=413.47 Aligned_cols=310 Identities=36% Similarity=0.493 Sum_probs=272.2
Q ss_pred CCceEEEeeccCcccc--cCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCC
Q 019555 12 ARDVCIVGVARTPMGG--FLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPN 88 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~--~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~ 88 (339)
|++|+|||..||||+| +.+.+++.++.+|+.+|++++|+++|+++++||.+++|++.+... ++++++..+..+|++.
T Consensus 1 m~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~ 80 (402)
T PRK08242 1 MTEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPE 80 (402)
T ss_pred CCcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCC
Confidence 3689999999999999 478999999999999999999999999999999999999987543 5678888889999976
Q ss_pred CcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccc-ccCCCc
Q 019555 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWD-VYNDFG 167 (339)
Q Consensus 89 ~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 167 (339)
++|.++|+++|+|++.||..|+++|++|.+|++|++|+|+||+.|+... +..+ .. +.+.. ++....
T Consensus 81 ~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~----~~~~----~~-----~~~~~~~~~~~~ 147 (402)
T PRK08242 81 TVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSD----GGAW----AM-----DPSTNFPTYFVP 147 (402)
T ss_pred CCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCccccc----Cccc----cc-----CcccccccccCC
Confidence 7999999999999999999999999999999999999999999775221 1000 00 11111 222247
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPS 246 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~ 246 (339)
|+..+++|+++||++||++++|++++|+|+..+...++|.+||+|++ .++++ .++++|+..|+ +|.|++++++|+
T Consensus 148 mg~~Ae~~a~~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~--~~~~~--~~~~~de~~r~~~t~e~l~~l~p~ 223 (402)
T PRK08242 148 QGISADLIATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVK--DQNGL--TILDHDEHMRPGTTMESLAKLKPS 223 (402)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeee--cCCCC--EeeCCCCCCCCCCCHHHHhCCCCC
Confidence 89999999999999999999999999999999999999999999998 22332 55899999999 999999999999
Q ss_pred CCC----CC-----------------ccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchH
Q 019555 247 FKE----GG-----------------SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305 (339)
Q Consensus 247 ~~~----~g-----------------~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 305 (339)
|++ +| ++|+.|||+++|||+|+||++++.|++++.+|+++|.|++....++..+..++.
T Consensus 224 f~~~~~~~g~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~ 303 (402)
T PRK08242 224 FAMMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPV 303 (402)
T ss_pred ccCccccCcccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccHH
Confidence 987 34 589999999999999999999999999999888999999998777766777889
Q ss_pred HHHHHHHHHcCCCCCCCcEEEeecccccccccC
Q 019555 306 LAIPKAIANAGLEASQIDYYEINEAFSVRNHVP 338 (339)
Q Consensus 306 ~a~~~al~~agl~~~DId~~~~hd~F~~~~l~~ 338 (339)
.+++++|+++||+++|||++|+||||+++++++
T Consensus 304 ~a~~~al~~AGl~~~DID~~ei~daFa~~~l~~ 336 (402)
T PRK08242 304 PATRKALAKAGLTVDDIDLFELNEAFASVVLRF 336 (402)
T ss_pred HHHHHHHHHcCCCHHHCCEEEecchhhHHHHHH
Confidence 999999999999999999999999999998875
No 13
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=100.00 E-value=8.7e-55 Score=414.39 Aligned_cols=323 Identities=38% Similarity=0.538 Sum_probs=276.3
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHH-HcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCc
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALK-RANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~-dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~ 90 (339)
++|+|||++||||+|+.+.+++.++.+|+.+|++++|+ ++|+++++||.+++|++.+... ++++++.+++.+|++.++
T Consensus 1 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~ 80 (400)
T TIGR02430 1 REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV 80 (400)
T ss_pred CcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 46999999999999988888899999999999999999 5799999999999998875433 468899999999998669
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcc-cccc-----ccccccccccC
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDT-IVDG-----MLKDGLWDVYN 164 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~ 164 (339)
|.++|+++|+|++.|+..|+++|++|++|++|++|+|+||+.|+.... .+..++... ..+. .....+.+.+.
T Consensus 81 p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (400)
T TIGR02430 81 PGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGK--ADSAFSRSAKIEDTTIGWRFINPLMKALYG 158 (400)
T ss_pred ceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccc--cccccccccccccccccccccCcccccccc
Confidence 999999999999999999999999999999999999999987752111 011111000 0010 01122333344
Q ss_pred CCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcC
Q 019555 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKL 243 (339)
Q Consensus 165 ~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~ 243 (339)
...|++.+++|+++||++||+++++++++|+++..+...++|.++|+|+.++..++++ ..+++|+..|+ ++.|+++++
T Consensus 159 ~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~-~~~n~da~~r~~~t~e~l~~~ 237 (400)
T TIGR02430 159 VDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEP-TVVDQDEHPRPETTLEGLAKL 237 (400)
T ss_pred cCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCc-eeeCCCCccCCCCCHHHHhcC
Confidence 5679999999999999999999999999999999999999999999999987654432 45899999998 999999999
Q ss_pred CCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCc
Q 019555 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 244 ~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId 323 (339)
+|+|+|+|++|+.|||+++|||+|+||++++.|++++.+|.++|.|++....++.....++..+++++|+++||+++|||
T Consensus 238 ~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DID 317 (400)
T TIGR02430 238 KPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLLARAGLSIDQFD 317 (400)
T ss_pred CCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccchHHHHHHHHHHHhCCCHHHCC
Confidence 99998889999999999999999999999999999998888999999988665655666788999999999999999999
Q ss_pred EEEeecccccccccC
Q 019555 324 YYEINEAFSVRNHVP 338 (339)
Q Consensus 324 ~~~~hd~F~~~~l~~ 338 (339)
++|+||||+++++++
T Consensus 318 ~~ei~D~f~~~~l~~ 332 (400)
T TIGR02430 318 VIELNEAFAAQALAV 332 (400)
T ss_pred CcccCcHHHHHHHHH
Confidence 999999999988765
No 14
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.9e-54 Score=412.50 Aligned_cols=324 Identities=36% Similarity=0.485 Sum_probs=275.2
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCc
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~ 90 (339)
|++|+|||++||||+|+++.+++.++.+|+.+|+++||+++|+++++||.+++|++.+... +++++++++..+|++.++
T Consensus 1 ~~~v~Iv~~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~ 80 (401)
T PRK08131 1 MLDAYIYDGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTV 80 (401)
T ss_pred CCcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCC
Confidence 3689999999999999888888999999999999999999999999999999998876543 577888899999998679
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCc-cccccc-----cccccccccC
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD-TIVDGM-----LKDGLWDVYN 164 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~ 164 (339)
|.++|+++|+|++.|+..|+++|++|++|++|++|+|+||+.|...... +..++.. ..++.. ....+.+.+.
T Consensus 81 p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 158 (401)
T PRK08131 81 PGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKA--ESAFSRDAKVFDTTIGARFPNPKIVAQYG 158 (401)
T ss_pred ceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCccccccc--ccccccCcchhhhhhcccccCcccccccc
Confidence 9999999999999999999999999999999999999999877522110 0111100 001100 0011222233
Q ss_pred CCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcC
Q 019555 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKL 243 (339)
Q Consensus 165 ~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~ 243 (339)
...|++.+++|+++||+|+|++++|++++|+++....+.++|+++++|+++++....+..++..|+.+|| .|+|.|.++
T Consensus 159 ~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~~l 238 (401)
T PRK08131 159 NDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTKL 238 (401)
T ss_pred cCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHhcC
Confidence 4578999999999999999999999999999888888888999999999987643333345889999999 999999999
Q ss_pred CCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCc
Q 019555 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 244 ~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId 323 (339)
+|+| ++|++|++|||+++|||+|+||++++.+++++.+|.++|.|++....++..+..+++.+++++|+++||+++|||
T Consensus 239 ~p~f-~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did 317 (401)
T PRK08131 239 KPLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLDDMD 317 (401)
T ss_pred CCCC-CCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHHCC
Confidence 9999 569999999999999999999999999999998888899999999876666667889999999999999999999
Q ss_pred EEEeecccccccccC
Q 019555 324 YYEINEAFSVRNHVP 338 (339)
Q Consensus 324 ~~~~hd~F~~~~l~~ 338 (339)
++|+||||++++|++
T Consensus 318 ~~ei~d~Fa~~~l~~ 332 (401)
T PRK08131 318 IIEINEAFASQVLGC 332 (401)
T ss_pred eehhccHHHHHHHHH
Confidence 999999999998875
No 15
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.8e-54 Score=412.18 Aligned_cols=324 Identities=48% Similarity=0.739 Sum_probs=273.4
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~ 91 (339)
.++|+|||+++|||+|+.+.+++.++.+|+.+|+++||+++|+++++||.+++|+..+...++++.++.++.+|++..+|
T Consensus 6 ~~~V~Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p 85 (397)
T PRK06954 6 QDPIVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVG 85 (397)
T ss_pred CCCEEEEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCcc
Confidence 46799999999999998788889999999999999999999999999999999988765556677777888889986689
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccccc-CCCcHHH
Q 019555 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY-NDFGMGV 170 (339)
Q Consensus 92 ~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 170 (339)
.++++++|+|+..++..|+++|++|.+|++|++|+|++|+.|+.....|.+..++..........+.+.+.+ ....|+.
T Consensus 86 ~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (397)
T PRK06954 86 CTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGT 165 (397)
T ss_pred EeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHHH
Confidence 999999999999999999999999999999999999999766532211221112211111111111222222 2357999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHH-HHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCC
Q 019555 171 CAEICANKHTITRDEQDSYAIRSFKRGIA-AQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE 249 (339)
Q Consensus 171 ~a~~~~~~~g~~~~~~~~~~~~~~~~a~~-n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 249 (339)
.+++|+++||+++|+++.|++++|+|+.. || .++|+++++|+++++..++ .+++.|+..|..+.+.+.+++|+|+|
T Consensus 166 ~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~-~~~~~~~~~pv~v~~~~~~--~~v~~D~~pr~~~~~~l~~l~~~f~~ 242 (397)
T PRK06954 166 FAEECAGEYGFTREAQDAFAIESLARAKRANE-DGSFAWEIAPVTVAGKKGD--TVIDRDEQPFKANPEKIPTLKPAFSK 242 (397)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH-cCCCCceEeeEEeccCCCC--eEeccCCCcCCCCHHHHhCCCCccCC
Confidence 99999999999999999999999999997 67 5999999999998765444 45888999999999999999999998
Q ss_pred CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 250 ~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
+|++|++|||+++|||+|+||++++.+++++.+|+++|.|++.....+..+..++..+++++|+++||+++|||++|+||
T Consensus 243 ~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~d 322 (397)
T PRK06954 243 TGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLFEKNGWRAAEVDLFEINE 322 (397)
T ss_pred CCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcccccchHHHHHHHHHHHcCCCHHHCCEEehhh
Confidence 89999999999999999999999999999999998899998876555555667788999999999999999999999999
Q ss_pred ccccccccC
Q 019555 330 AFSVRNHVP 338 (339)
Q Consensus 330 ~F~~~~l~~ 338 (339)
+|+++++++
T Consensus 323 ~fa~~~l~~ 331 (397)
T PRK06954 323 AFAVVTMAA 331 (397)
T ss_pred HHHHHHHHH
Confidence 999998865
No 16
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.1e-53 Score=408.13 Aligned_cols=320 Identities=31% Similarity=0.477 Sum_probs=268.5
Q ss_pred CceEEEeeccCccccc------CCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcC
Q 019555 13 RDVCIVGVARTPMGGF------LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAG 85 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~------~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lg 85 (339)
++|+|||+++|||+|+ .+.+++.++.+|+.+|+++||+|+|+++++||.+++|++.+... ..+.++......+
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~ 81 (394)
T PRK06445 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLAR 81 (394)
T ss_pred CcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcC
Confidence 6899999999999986 47788999999999999999999999999999999998876543 2344555545555
Q ss_pred CCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCC
Q 019555 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (339)
Q Consensus 86 l~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (339)
++...|+++++.+|+|+..++..|+++|++|.+|+||++|+|++++.|+. ......... ....++.. .. ++.+..
T Consensus 82 ~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~-~~~~~~~~~--~~~~~~~~-~~-~~~~~~ 156 (394)
T PRK06445 82 LPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMG-DNPHIEPNP--KLLTDPKY-IE-YDLTTG 156 (394)
T ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccc-cCccccCCh--hhcccccc-Cc-ccccCC
Confidence 55568999999999999999999999999999999999999999976642 100000000 00001111 11 122223
Q ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCC
Q 019555 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLR 244 (339)
Q Consensus 166 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~ 244 (339)
..|++.+++|+++||+++|++++|++++|+|+..|+..++|+++|+|+++. +++++ .+++||+..|+ +|.|++++++
T Consensus 157 ~~~a~~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~-~~~~~-~~~npda~~r~~~t~e~~~~~~ 234 (394)
T PRK06445 157 YVMGLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVE-VEGKK-KVVDVDQSVRPDTSLEKLAKLP 234 (394)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEec-CCCCc-eeeCCCCCCCCCCCHHHHhcCC
Confidence 469999999999999999999999999999999999999999999999984 44444 66899999998 9999999999
Q ss_pred CCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcE
Q 019555 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDY 324 (339)
Q Consensus 245 ~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~ 324 (339)
|+|+|+|++|+.|||+++|||+|+||++++.+++++.+|+++|.|++....++...+.++..+++++|+++|++++|||+
T Consensus 235 ~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~ 314 (394)
T PRK06445 235 PAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPVPASKKALEKAGLSVKDIDL 314 (394)
T ss_pred CccCCCCcEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCchhcchHHHHHHHHHHHcCCCHHHcCE
Confidence 99988899999999999999999999999999999999988999999998766666677889999999999999999999
Q ss_pred EEeecccccccccCC
Q 019555 325 YEINEAFSVRNHVPT 339 (339)
Q Consensus 325 ~~~hd~F~~~~l~~~ 339 (339)
+|+||||++++++++
T Consensus 315 ~e~~d~f~~~~l~~~ 329 (394)
T PRK06445 315 WEINEAFAVVVLYAI 329 (394)
T ss_pred EEecccchHHHHHHH
Confidence 999999999998763
No 17
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.4e-53 Score=405.51 Aligned_cols=316 Identities=34% Similarity=0.418 Sum_probs=268.9
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCc
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~ 90 (339)
|++|+|||+++|||+|+.+.+.+.++.+|+.+|++++|+|+|+++++||.+++|+...... ++++++.+++.+|++.++
T Consensus 1 m~~V~Ivg~~rTpfgk~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~ 80 (387)
T PRK07850 1 MGNPVIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV 80 (387)
T ss_pred CCcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC
Confidence 3689999999999999888888999999999999999999999999999999998774433 356888999999998679
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHH
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (339)
|.++|+++|+|++.|+..|++.|++|++|++|++|+|+||+.|+... .+..++..... . ++ +....|+.
T Consensus 81 p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~---~~~~~~~~~~~------~-~~-~~~~~m~~ 149 (387)
T PRK07850 81 GATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGAN---AGPGRGLPRPD------S-WD-IDMPNQFE 149 (387)
T ss_pred ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCccccc---ccccccCcccc------c-cc-cCcchHHH
Confidence 99999999999999999999999999999999999999998774211 11111110000 0 11 11134667
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCC--CC---CcceEeecCCCCcccCHHHHhcCCC
Q 019555 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSG--RG---KPFIIVDKDEGLEKFDAAKLMKLRP 245 (339)
Q Consensus 171 ~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~--~~---~~~~~~~~~~~~r~~~~~~~~~~~~ 245 (339)
.+++|+++||++||++++|++++|+|+..+..+++|+++|+|++++.. ++ .....++.|+..|.+|.|++.+++|
T Consensus 150 ~ae~~~~~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p 229 (387)
T PRK07850 150 AAERIAKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKP 229 (387)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCC
Confidence 899999999999999999999999999999999999999999987542 10 1113588999999999999999999
Q ss_pred CCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEE
Q 019555 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYY 325 (339)
Q Consensus 246 ~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~ 325 (339)
+| +++.+|++|||+++|||+|+||+|++.+++++.+|.++|.|++....++.....++..+++++|+++|++++|||++
T Consensus 230 ~~-~~~~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ 308 (387)
T PRK07850 230 VL-EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAKVLEKAGMKIGDIDLV 308 (387)
T ss_pred CC-CCCCccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchhhcchHHHHHHHHHHHcCCCHHHcCee
Confidence 98 56778999999999999999999999999999888899999998766665666778999999999999999999999
Q ss_pred EeecccccccccCC
Q 019555 326 EINEAFSVRNHVPT 339 (339)
Q Consensus 326 ~~hd~F~~~~l~~~ 339 (339)
|+||||++++|+++
T Consensus 309 ei~d~F~~~~l~~~ 322 (387)
T PRK07850 309 EINEAFASVVLSWA 322 (387)
T ss_pred eecccchHHHHHHH
Confidence 99999999998763
No 18
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.4e-53 Score=410.77 Aligned_cols=322 Identities=36% Similarity=0.448 Sum_probs=267.7
Q ss_pred CCCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc
Q 019555 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (339)
Q Consensus 11 ~~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~ 90 (339)
|+++|+|||+++|||+|+.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+.....++++.++..+|++..+
T Consensus 1 ~~~~v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~ 80 (426)
T PRK08170 1 MARPVYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKV 80 (426)
T ss_pred CCCcEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCc
Confidence 56889999999999999877677789999999999999999999999999999998765433456778899999996457
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhh--hccC----------CCCCcccc-cccc--
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEA--RKGS----------RLGHDTIV-DGML-- 155 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~--~~~~----------~~~~~~~~-~~~~-- 155 (339)
|.++++.+|+|+..+|..|+++|++|.+|+||++|+|+++..|...... +... .++....+ ..+.
T Consensus 81 p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (426)
T PRK08170 81 PAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAP 160 (426)
T ss_pred eeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCcccccccccccccccc
Confidence 9999999999999999999999999999999999999998766421110 0000 01000000 0000
Q ss_pred ----ccccccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCC
Q 019555 156 ----KDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEG 231 (339)
Q Consensus 156 ----~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 231 (339)
..++..|+....|++.+++||++||+|+|++++|++++|+|+..+.+.+.|+ +|+|++. +++. .+..||.
T Consensus 161 ~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~-~i~pv~~--~~~n---p~a~de~ 234 (426)
T PRK08170 161 VIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLFD--RDGK---FYDHDDG 234 (426)
T ss_pred ccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc-eEeeeec--CCCC---eeccCCC
Confidence 0233344434589999999999999999999999999999988877779998 9999982 2222 3788999
Q ss_pred Ccc-cCHHHHhcCCCCCC-CCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHH
Q 019555 232 LEK-FDAAKLMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIP 309 (339)
Q Consensus 232 ~r~-~~~~~~~~~~~~~~-~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~ 309 (339)
.|+ +|.|+|++++|+|+ |.+++|++|||+++|||+|+||++++.|++++.+|.++|.+++....++..+..+++.+++
T Consensus 235 ~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~ 314 (426)
T PRK08170 235 VRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQMGLGPVHAAT 314 (426)
T ss_pred CCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCchhhcccHHHHHH
Confidence 999 99999999999997 6688999999999999999999999999999999977999998887666666667889999
Q ss_pred HHHHHcCCCCCCCcEEEeecccccccccC
Q 019555 310 KAIANAGLEASQIDYYEINEAFSVRNHVP 338 (339)
Q Consensus 310 ~al~~agl~~~DId~~~~hd~F~~~~l~~ 338 (339)
++|+++||+++|||++|+||||++++|++
T Consensus 315 ~al~~aGl~~~did~~ei~daFa~~~l~~ 343 (426)
T PRK08170 315 PLLQRHGLTLEDLDLWEINEAFAAQVLAC 343 (426)
T ss_pred HHHHHcCCCHHHcCEEEecchhHHHHHHH
Confidence 99999999999999999999999998854
No 19
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=100.00 E-value=9.1e-54 Score=407.07 Aligned_cols=313 Identities=37% Similarity=0.518 Sum_probs=270.7
Q ss_pred CceEEEeeccCccccc-CCCCCCCCHHHHHHHHHHHHHHH-cCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCC
Q 019555 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS 89 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~Al~d-agl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~ 89 (339)
++|+|||+++|||+|+ .+.+++..+.+|+.+++++||++ +|+++++||.+++|+...... ++++++.++..+|++..
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~ 81 (387)
T PRK08947 2 EDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHS 81 (387)
T ss_pred CcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 6899999999999995 67888999999999999999995 799999999999998765443 46788889999999856
Q ss_pred cceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHH
Q 019555 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (339)
Q Consensus 90 ~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (339)
+|.++|+++|+|++.|+..|+++|++|++|++|++|+|++|..|.... ..+ .+...+.+ ......|+
T Consensus 82 ~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~-----~~~------~~~~~~~~--~~~~~~~~ 148 (387)
T PRK08947 82 VPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHG-----VDF------HPGLSKNV--AKAAGMMG 148 (387)
T ss_pred CcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccc-----cCc------chhhhhhc--cccchHHH
Confidence 899999999999999999999999999999999999999998664211 000 00000111 11124799
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCC
Q 019555 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFK 248 (339)
Q Consensus 170 ~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~ 248 (339)
+.+++|+++||+++|++++|++++|+|+..|+.++.|+.||+|+..+++++.+ ..+++|+..|+ +|.|+|++++|+++
T Consensus 149 ~~a~~~~~~ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~~ 227 (387)
T PRK08947 149 LTAEMLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVL-KLFDYDEVIRPETTVEALAALRPAFD 227 (387)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCc-eeecCCCCCcCCCCHHHHhcCCceee
Confidence 99999999999999999999999999999998889999999999988755444 45889999998 99999999999997
Q ss_pred C-CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEe
Q 019555 249 E-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEI 327 (339)
Q Consensus 249 ~-~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~ 327 (339)
| +|.+|++|||+++|||+|+||++++.+++++.+|+++|.|++....++..+..++..+++++|+++|++++|||++|+
T Consensus 228 p~~g~lt~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId~~El 307 (387)
T PRK08947 228 PVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFEL 307 (387)
T ss_pred CCCCcEEccccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcccccccHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 6 577999999999999999999999999999988889999999986555555566789999999999999999999999
Q ss_pred ecccccccccCC
Q 019555 328 NEAFSVRNHVPT 339 (339)
Q Consensus 328 hd~F~~~~l~~~ 339 (339)
||||++++++++
T Consensus 308 ~d~F~~~~l~~~ 319 (387)
T PRK08947 308 NEAFAAQSLPCL 319 (387)
T ss_pred cccchHHHHHHH
Confidence 999999998863
No 20
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=100.00 E-value=1.2e-53 Score=411.23 Aligned_cols=323 Identities=28% Similarity=0.421 Sum_probs=270.1
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~ 92 (339)
++|+|||+++|||+|+.+.+++.++.+|+.+|+++||+++|+++++||.+++|++.+...++++++.+++.+|++..+|.
T Consensus 5 ~~v~Ivg~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~ 84 (428)
T PRK08963 5 DRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDA 84 (428)
T ss_pred CeEEEEecccCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcc
Confidence 46999999999999987888899999999999999999999999999999999877655567788889999999866899
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhh--hc------cCCCCCcc-c-----ccc-cc-c
Q 019555 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEA--RK------GSRLGHDT-I-----VDG-ML-K 156 (339)
Q Consensus 93 ~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~--~~------~~~~~~~~-~-----~~~-~~-~ 156 (339)
++|+++|+|++.|+..|+++|++|.+|+||++|+|++|+.|+..... +. ...++... . ... .. .
T Consensus 85 ~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (428)
T PRK08963 85 YSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVP 164 (428)
T ss_pred eeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhccccC
Confidence 99999999999999999999999999999999999999877532110 10 00001000 0 000 00 0
Q ss_pred cccccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-c
Q 019555 157 DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-F 235 (339)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~ 235 (339)
..+.++.+...|++.+++|+++||+++|++++|++++|+|+..|.+.+.|.+||+|+..+... ..++.|+..|+ +
T Consensus 165 ~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a----~~~~~D~~~r~~~ 240 (428)
T PRK08963 165 PAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYK----QPLEEDNNIRGDS 240 (428)
T ss_pred cccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCc----eeeCCCCCCCCCC
Confidence 122222223569999999999999999999999999999999999999999999999864322 24788999998 9
Q ss_pred CHHHHhcCCCCCCC-CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-CccccchHHHHHHHHH
Q 019555 236 DAAKLMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-EWFTTAPSLAIPKAIA 313 (339)
Q Consensus 236 ~~~~~~~~~~~~~~-~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-~~~~~~~~~a~~~al~ 313 (339)
|.|+|++++|+|+| +|++|++|||+++|||+|+||++++.+++++.+|.++|.+++....++ ..+..++..+++++|+
T Consensus 241 t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~~a~~~al~ 320 (428)
T PRK08963 241 TLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAYATPLALE 320 (428)
T ss_pred CHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhhhhhHHHHHHHHHHH
Confidence 99999999999974 488999999999999999999999999999999988999999886444 2345567889999999
Q ss_pred HcCCCCCCCcEEEeecccccccccCC
Q 019555 314 NAGLEASQIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 314 ~agl~~~DId~~~~hd~F~~~~l~~~ 339 (339)
++|++++|||++|+||||++++|+++
T Consensus 321 ~AGl~~~DiD~~Ei~d~Fa~~~l~~~ 346 (428)
T PRK08963 321 RAGLTLADLTLIDMHEAFAAQTLANL 346 (428)
T ss_pred HcCCCHHHCCEEEEccccHHHHHHHH
Confidence 99999999999999999999988753
No 21
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=100.00 E-value=1.4e-53 Score=409.66 Aligned_cols=324 Identities=29% Similarity=0.399 Sum_probs=271.8
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~ 91 (339)
-++|+|||+++|||+|+.+.+.+.++.+|+.+++++||+|+|+++++||.+++|++.+...++++++.+++..|++..+|
T Consensus 6 ~~~V~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p 85 (430)
T TIGR02446 6 GERIAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTD 85 (430)
T ss_pred CCCEEEEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCc
Confidence 35799999999999998888889999999999999999999999999999999988765556789999999999986799
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhcc--------CCCCCcc------cccc-ccc
Q 019555 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKG--------SRLGHDT------IVDG-MLK 156 (339)
Q Consensus 92 ~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~--------~~~~~~~------~~~~-~~~ 156 (339)
.++|+++|+|++.|+..|+++|++|.+|++|++|+|+||+.|+........ ..++... .+.. +..
T Consensus 86 ~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (430)
T TIGR02446 86 AYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPV 165 (430)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhccc
Confidence 999999999999999999999999999999999999999877432110000 0000000 0000 000
Q ss_pred cccc-cccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-
Q 019555 157 DGLW-DVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK- 234 (339)
Q Consensus 157 ~~~~-~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~- 234 (339)
.... ++.+...|++.+++|+++||+++|++++|++++|+|+..+.+.+.|.++++|+..+.. ...++.|+.+|+
T Consensus 166 ~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~----a~~~~~D~~~r~~ 241 (430)
T TIGR02446 166 PPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPY----KQWIAEDNNIRHN 241 (430)
T ss_pred CcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCC----ceEecccCCCCCC
Confidence 1111 1112346999999999999999999999999999999999999999999999875432 155889999998
Q ss_pred cCHHHHhcCCCCCCC-CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-CccccchHHHHHHHH
Q 019555 235 FDAAKLMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-EWFTTAPSLAIPKAI 312 (339)
Q Consensus 235 ~~~~~~~~~~~~~~~-~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-~~~~~~~~~a~~~al 312 (339)
+|.|+|++++|+|+| .|++|++|||+++|||+|+||++++.+++++.+|.++|.+++....++ ..+..++..+++++|
T Consensus 242 ~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~a~~~al 321 (430)
T TIGR02446 242 STLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGPSYATPLAL 321 (430)
T ss_pred CCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccHHHHHHHHH
Confidence 999999999999986 489999999999999999999999999999988888999999876554 345567788999999
Q ss_pred HHcCCCCCCCcEEEeecccccccccCC
Q 019555 313 ANAGLEASQIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 313 ~~agl~~~DId~~~~hd~F~~~~l~~~ 339 (339)
+++|++++|||++|+||||++++|+++
T Consensus 322 ~~Agl~~~Did~~Ei~daFa~~~l~~~ 348 (430)
T TIGR02446 322 QRAGLALSDLTLIDMHEAFAAQTLANV 348 (430)
T ss_pred HHcCCCHHHCCEEEeccccHHHHHHHH
Confidence 999999999999999999999998763
No 22
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.1e-53 Score=404.76 Aligned_cols=314 Identities=39% Similarity=0.539 Sum_probs=269.5
Q ss_pred CceEEEeeccCccccc-CCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCc
Q 019555 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~ 90 (339)
++|+|||+++|||+|+ .+.+++.++.+|+.+|+++||+++|+.+++||.+++|++.+... ++.+++.+++.+|++..+
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~ 81 (391)
T PRK07661 2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTV 81 (391)
T ss_pred CcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCc
Confidence 5799999999999995 67788999999999999999999998789999999998876543 467888899999997558
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHH
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (339)
|.++|+++|+|+..|+..|+++|++|.+|++||+|+|++++.|+... .++..... .+ . .|.....|++
T Consensus 82 p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~------~~~~~~~~----~~-~-~~~~~~~m~~ 149 (391)
T PRK07661 82 PAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGH------VVRPNPRL----VE-A-APEYYMGMGH 149 (391)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCcccc------ccCCCccc----cc-c-ccchhhhHHH
Confidence 99999999999999999999999999999999999999998764210 00000000 00 0 1111134799
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCC----CCC---cceEeecCCCCcc-cCHHHHhc
Q 019555 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSG----RGK---PFIIVDKDEGLEK-FDAAKLMK 242 (339)
Q Consensus 171 ~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~----~~~---~~~~~~~~~~~r~-~~~~~~~~ 242 (339)
.+++|+++||+++|++++|++++|+|+..||++++|+++|+|++++.. ++. +..+++.|+..|| .+.|.+.+
T Consensus 150 ~a~~~~~~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~ 229 (391)
T PRK07661 150 TAEQVAVKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGK 229 (391)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhc
Confidence 999999999999999999999999999999998899999999988652 121 1266889999999 99999999
Q ss_pred CCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCC
Q 019555 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQI 322 (339)
Q Consensus 243 ~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DI 322 (339)
++|+|+++|++|++|||+++|||+|+||++++.+++++.+|.++|.|++.....+..+..++..+++++|+++||+++||
T Consensus 230 l~p~f~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~di 309 (391)
T PRK07661 230 LRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSDI 309 (391)
T ss_pred CCCCcCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCcccchHHHHHHHHHHHHcCCCHHHC
Confidence 99999878999999999999999999999999999999999889999999987666666678899999999999999999
Q ss_pred cEEEeecccccccccC
Q 019555 323 DYYEINEAFSVRNHVP 338 (339)
Q Consensus 323 d~~~~hd~F~~~~l~~ 338 (339)
|++|+||+|+++++++
T Consensus 310 d~~ei~d~f~~~~l~~ 325 (391)
T PRK07661 310 GLFELNEAFASQSIQV 325 (391)
T ss_pred CEEEeCCHHHHHHHHH
Confidence 9999999999998875
No 23
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=100.00 E-value=2.1e-53 Score=404.04 Aligned_cols=312 Identities=36% Similarity=0.486 Sum_probs=269.6
Q ss_pred ceEEEeeccCcccc-cCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCc
Q 019555 14 DVCIVGVARTPMGG-FLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (339)
Q Consensus 14 ~v~IvG~~~t~~~~-~~~~~~~~~~~~L~~~A~~~Al~d-agl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~ 90 (339)
+|+|||++||||+| +.+.+.+.++.+|+.+|++++|++ +|+++++||.+++|++..... ++++++++++..|++..+
T Consensus 1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~ 80 (385)
T TIGR02445 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS 80 (385)
T ss_pred CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence 58999999999998 467788999999999999999996 699999999999998864333 456888888889998778
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHH
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (339)
|.++|+++|+|++.|+..|++.|++|++|++|++|+|+||+.|.... ..+ .+...+.+. .....|++
T Consensus 81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~-----~~~------~~~~~~~~~--~~~~~~~~ 147 (385)
T TIGR02445 81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHG-----VDF------HPGMSLHVA--KAAGMMGL 147 (385)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccC-----CCc------chhHHhhhc--cccchHHH
Confidence 99999999999999999999999999999999999999998764211 000 000000011 11247999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCC
Q 019555 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (339)
Q Consensus 171 ~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~ 249 (339)
.+++|+++||+++|++++|++++|+|+.++.+++.|+.||+|++.++.++++ ..++||+..|+ +|.|+|+++||+|+|
T Consensus 148 ~a~~~~~~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~~p 226 (385)
T TIGR02445 148 TAEMLGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFL-KQFDYDEVIRPETTVESLAALRPAFDP 226 (385)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCc-eeeCCCCCCCCCCCHHHHhcCCceecC
Confidence 9999999999999999999999999999999999999999999987655443 45889999998 999999999999987
Q ss_pred -CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEee
Q 019555 250 -GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEIN 328 (339)
Q Consensus 250 -~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~h 328 (339)
+|.+|++|||+++|||+|+||++++.+++++.+|+++|.|++....++..+..++..+++++|+++||+++|||++|+|
T Consensus 227 ~~g~lt~~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~ 306 (385)
T TIGR02445 227 KNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELN 306 (385)
T ss_pred CCCceecccCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEEc
Confidence 6789999999999999999999999999999888899999999866665555678899999999999999999999999
Q ss_pred cccccccccCC
Q 019555 329 EAFSVRNHVPT 339 (339)
Q Consensus 329 d~F~~~~l~~~ 339 (339)
|||++++++++
T Consensus 307 daFa~~~l~~~ 317 (385)
T TIGR02445 307 EAFAAQALPCL 317 (385)
T ss_pred cccHHHHHHHH
Confidence 99999998763
No 24
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=9.8e-53 Score=398.00 Aligned_cols=317 Identities=31% Similarity=0.437 Sum_probs=278.5
Q ss_pred CceEEEeeccCccc--c-cCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCC
Q 019555 13 RDVCIVGVARTPMG--G-FLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPN 88 (339)
Q Consensus 13 ~~v~IvG~~~t~~~--~-~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~ 88 (339)
++|+||+..||||+ | ..|.+++.++.+|+..+++++|+++|+++++||.+++|++.+... ++++++++++..|++.
T Consensus 2 ~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~ 81 (417)
T PRK06025 2 AEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDI 81 (417)
T ss_pred CceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCC
Confidence 57999999999998 8 589999999999999999999999999999999999999987654 6899999999999998
Q ss_pred CcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhh-hhhccCCCCCccccccccccccccccCCCc
Q 019555 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLA-EARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (339)
Q Consensus 89 ~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
++|.++|++.|+|++.||..|+..|++|+++++|++|+|+||+.|+... ..+++. .....+.. .+++++.+....
T Consensus 82 ~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~ 157 (417)
T PRK06025 82 KASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGK---PPLGMGSG-NLRLRALHPQSH 157 (417)
T ss_pred CCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCC---Cccccccc-CcccccccCCCC
Confidence 9999999999999999999999999999999999999999999997332 123221 11111111 234444444568
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPS 246 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~ 246 (339)
|+..+++++++||++||++|+|++++|+++..+..++.|.+||+|++ .++++ .+++.||.+|+ +|.|.|.+++|+
T Consensus 158 Mg~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~--~~~~~--~~~~~De~~R~~~t~e~la~L~p~ 233 (417)
T PRK06025 158 QGVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVY--RDDGS--VALDHEEFPRPQTTAEGLAALKPA 233 (417)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEE--cCCCC--EEecCCCCCCCCCCHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999998 22222 55899999999 999999999999
Q ss_pred CC--------CCCc------------------cccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCcc
Q 019555 247 FK--------EGGS------------------VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300 (339)
Q Consensus 247 ~~--------~~g~------------------l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~ 300 (339)
|+ ++|. +|+.|+|+++|||+|+||++++.|++++.+|+++|.|++....++..+
T Consensus 234 F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~~ 313 (417)
T PRK06025 234 FTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLM 313 (417)
T ss_pred ccccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhh
Confidence 96 3677 999999999999999999999999999988999999999998777667
Q ss_pred ccchHHHHHHHHHHcCCCCCCCcEEEeeccccccccc
Q 019555 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVRNHV 337 (339)
Q Consensus 301 ~~~~~~a~~~al~~agl~~~DId~~~~hd~F~~~~l~ 337 (339)
+.++..+++++|+++|++++|||++|+||+|+.+.+.
T Consensus 314 ~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~~~l~ 350 (417)
T PRK06025 314 LNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEK 350 (417)
T ss_pred cccHHHHHHHHHHHcCCCHHHCcEEEEchHHHHHHHH
Confidence 7788999999999999999999999999999988654
No 25
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=100.00 E-value=6.6e-53 Score=402.62 Aligned_cols=320 Identities=52% Similarity=0.754 Sum_probs=271.7
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI 95 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v 95 (339)
+|||+++|||+|+.+.+++.++.+|+.+|+++||+|+|+++++||.+++++..+...++..+..++..+|++.+.|.+++
T Consensus 1 ~Ivg~~~Tpf~r~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v 80 (386)
T cd00751 1 VIVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTV 80 (386)
T ss_pred CEEEeecCCccCCCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhh
Confidence 59999999999988878889999999999999999999999999999998877665567778889999999744799999
Q ss_pred cccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHHHHH
Q 019555 96 NKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEIC 175 (339)
Q Consensus 96 ~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 175 (339)
+.+|+|+..+|..|+++|++|.+++|||+|+|+++..+......+.....+... .......++..|+....|++.+++|
T Consensus 81 ~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~a~~~ 159 (386)
T cd00751 81 NRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNT-LDGMLDDGLTDPFTGLSMGITAENV 159 (386)
T ss_pred ccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccc-cccccccccccccCCCCHHHHHHHH
Confidence 999999999999999999999999999999999987654332211111111000 0001112333444456799999999
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCCCCccc
Q 019555 176 ANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGGSVT 254 (339)
Q Consensus 176 ~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~g~l~ 254 (339)
|++||+++|++++|++++|+|+..||+.+.+.+++.|+.+..+ ..+..+++++..|+ +|.|+|++++|+++|.|++|
T Consensus 160 ~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~ 237 (386)
T cd00751 160 AEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGR--KGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVT 237 (386)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccC--CCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEe
Confidence 9999999999999999999999999999999999999986543 23466789999999 99999999999998878899
Q ss_pred cccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeecccccc
Q 019555 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVR 334 (339)
Q Consensus 255 ~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd~F~~~ 334 (339)
++|||+++|||+|+||++++.+++++.+++++|.|++...+++.....+++.+++++|+++|++++|||++|+||+|+++
T Consensus 238 ~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~~ 317 (386)
T cd00751 238 AGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRAGLTLDDIDLIEINEAFAAQ 317 (386)
T ss_pred CCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEeechhHHH
Confidence 99999999999999999999999999999899999999887665556677899999999999999999999999999998
Q ss_pred cccC
Q 019555 335 NHVP 338 (339)
Q Consensus 335 ~l~~ 338 (339)
++++
T Consensus 318 ~~~~ 321 (386)
T cd00751 318 ALAC 321 (386)
T ss_pred HHHH
Confidence 8865
No 26
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=5e-54 Score=377.89 Aligned_cols=326 Identities=62% Similarity=0.879 Sum_probs=312.0
Q ss_pred cCCCCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 019555 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN 88 (339)
Q Consensus 9 ~~~~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~ 88 (339)
++.+++|+|||..|||++-+.+++..++..+|+.-|++.||+++++++++++-+|+|+++....+++++|+.++..||+.
T Consensus 2 ~~~~k~V~IVsaARTPIGsF~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~ 81 (396)
T KOG1390|consen 2 SLSSKDVFIVSAARTPIGSFRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPY 81 (396)
T ss_pred CCCCCceEEEeeccccccccccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcH
Q 019555 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (339)
Q Consensus 89 ~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (339)
.+++.+++..|+|++.|+.+|++.|+.|.+|+|+++|.|+||+.| +++..|.+..+|.....+.+..++++|-+....|
T Consensus 82 sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP-~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~M 160 (396)
T KOG1390|consen 82 SVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVP-YLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHM 160 (396)
T ss_pred ceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCc-chhhhccCcCcCCeeeeechhhcchHHHhccCCc
Confidence 999999999999999999999999999999999999999999999 5555799999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCC
Q 019555 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (339)
Q Consensus 169 ~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~ 247 (339)
|..+++..++|+||||++|.+++.+++++..+++.+.|.+||+|+++++++++ ..+++||.++. ++.+++.+.+++|
T Consensus 161 G~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~--~~v~~DEe~~k~~~~~~~~~l~~vF 238 (396)
T KOG1390|consen 161 GICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGE--TVVKKDEEPKKGSNIEKLSKLRPVF 238 (396)
T ss_pred chhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCc--EEeccchhhhcccchhhhcccccee
Confidence 99999999999999999999999999999999999999999999999999884 78899999999 9999999999999
Q ss_pred CCC-CccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEE
Q 019555 248 KEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYE 326 (339)
Q Consensus 248 ~~~-g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~ 326 (339)
.++ |.+|..|.+.+.|||+|+||.+.+.+.+.+.+|+++|.+|+.+..+|.++..+|..++.++|+++|+..+|||+||
T Consensus 239 ~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP~laipk~lk~aG~~~sdVd~~E 318 (396)
T KOG1390|consen 239 KEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAPALAIPKALKKAGLEQSDVDYWE 318 (396)
T ss_pred ecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccchHHHHHHHHHHcCcchhhhhHHh
Confidence 644 8899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccccccc
Q 019555 327 INEAFSVRNHV 337 (339)
Q Consensus 327 ~hd~F~~~~l~ 337 (339)
++++|+...|+
T Consensus 319 iNEAFs~v~lA 329 (396)
T KOG1390|consen 319 INEAFSVVVLA 329 (396)
T ss_pred hhhhhhHHHHH
Confidence 99999988775
No 27
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=100.00 E-value=1.4e-52 Score=399.76 Aligned_cols=321 Identities=48% Similarity=0.682 Sum_probs=267.0
Q ss_pred EEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec
Q 019555 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN 96 (339)
Q Consensus 17 IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~ 96 (339)
|||+++|||+|+.+.+.+.+..+|+.+|+++||+|+|+++++||.+++++.++....+..+..++..+|++.+.|.++++
T Consensus 1 IvG~~~tp~~~~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~ 80 (386)
T TIGR01930 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN 80 (386)
T ss_pred CcceecCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec
Confidence 78999999999877788899999999999999999999999999999988766544466777899999997457999999
Q ss_pred ccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhh-hccCCCCCccccccccccccccccCCCcHHHHHHHH
Q 019555 97 KVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEA-RKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEIC 175 (339)
Q Consensus 97 ~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 175 (339)
.+|+|+..+|..|+++|++|.+++|||+|+|.++..+...... +....++...........++..|+....|++.+++|
T Consensus 81 ~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~~y 160 (386)
T TIGR01930 81 RQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAENL 160 (386)
T ss_pred chhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHHHH
Confidence 9999999999999999999999999999999988755322111 111111110000001112344444456799999999
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCCCCccc
Q 019555 176 ANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGGSVT 254 (339)
Q Consensus 176 ~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~g~l~ 254 (339)
|++||+++|++++|++++|+|+..|++++.|+++++|..+..++ .+.++..|+..|. +|.|+|+++||+++|.|.+|
T Consensus 161 ~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~--~~~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~ 238 (386)
T TIGR01930 161 AKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRK--GPVTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVT 238 (386)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCC--CCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCeee
Confidence 99999999999999999999999999999999999998664322 1255677788887 99999999999997666699
Q ss_pred cccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeecccccc
Q 019555 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVR 334 (339)
Q Consensus 255 ~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd~F~~~ 334 (339)
++|||+++|||+|+||++++.+++++.+|+++|.|++.....+..+..+...+++++|+++|++++|||++|+||||++.
T Consensus 239 ~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~fa~~ 318 (386)
T TIGR01930 239 AGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLFEINEAFAAQ 318 (386)
T ss_pred CCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccccHHHHHHHHHHHcCCCHHHCCeeehcchhHHH
Confidence 99999999999999999999999999998899999999876555555667899999999999999999999999999999
Q ss_pred cccCC
Q 019555 335 NHVPT 339 (339)
Q Consensus 335 ~l~~~ 339 (339)
+++|+
T Consensus 319 ~~~~~ 323 (386)
T TIGR01930 319 VLACI 323 (386)
T ss_pred HHHHH
Confidence 88763
No 28
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=100.00 E-value=3.4e-52 Score=397.69 Aligned_cols=327 Identities=82% Similarity=1.238 Sum_probs=273.5
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~ 92 (339)
++|+|||+++|||+|+.+.+++.++.+|+.+|+++||+|+|+++++||.+++|+......++.+++.+++.+|++.+.|.
T Consensus 1 ~~v~IvG~~~Tp~g~~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~ 80 (394)
T PLN02644 1 RDVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTIC 80 (394)
T ss_pred CcEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCce
Confidence 46999999999999987778889999999999999999999999999999999866544456677788899999766899
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHH
Q 019555 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (339)
Q Consensus 93 ~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (339)
.+++.+|+|+..+|.+|+++|++|++|+||++|+|++++.+......+.+..++.....+......+++|+....|++.+
T Consensus 81 ~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 160 (394)
T PLN02644 81 TTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCA 160 (394)
T ss_pred EEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHH
Confidence 99999999999999999999999999999999999999766422111111112111111111112334555556699999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCC-CC
Q 019555 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE-GG 251 (339)
Q Consensus 173 ~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~g 251 (339)
++||++||+|+|++++|++++|+|+..|++.++|++++.|+++..+++++..+++.|+..|..+.+.+.+++|+|++ +|
T Consensus 161 ~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g 240 (394)
T PLN02644 161 ELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGG 240 (394)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCC
Confidence 99999999999999999999999999999988999999999876554555455777888887889999999999977 59
Q ss_pred ccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 252 ~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
.+|.+|||+++|||+++||++++.+++++.+|+++|.|++...+.+.....++..+++++|+++|++++|||++|+||||
T Consensus 241 ~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~Did~~Ei~d~f 320 (394)
T PLN02644 241 SVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDYYEINEAF 320 (394)
T ss_pred cEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHCCEEEeCcHH
Confidence 99999999999999999999999999999999889999998876554555677789999999999999999999999999
Q ss_pred ccccccCC
Q 019555 332 SVRNHVPT 339 (339)
Q Consensus 332 ~~~~l~~~ 339 (339)
++++++++
T Consensus 321 ~~~~l~~~ 328 (394)
T PLN02644 321 SVVALANQ 328 (394)
T ss_pred HHHHHHHH
Confidence 99988763
No 29
>PLN02287 3-ketoacyl-CoA thiolase
Probab=100.00 E-value=5.9e-52 Score=399.58 Aligned_cols=315 Identities=34% Similarity=0.520 Sum_probs=265.0
Q ss_pred CceEEEeeccCccccc-CCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCc
Q 019555 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~ 90 (339)
++|+|||+++|||+++ .+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+... .++..+.+++.+|+++..
T Consensus 46 ~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~ 125 (452)
T PLN02287 46 DDVVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETV 125 (452)
T ss_pred CCEEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCc
Confidence 5799999999999984 56667899999999999999999999999999999998876543 345667888899997558
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHH
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (339)
|.++++.+|+|+..++..|+.+|++|.+|+|||+|+|+++..|.... ..+... ... .....+ ....|++
T Consensus 126 pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~-----~~~~~~--~~~--~~~~~~--~~~~~g~ 194 (452)
T PLN02287 126 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWE-----GGVNPR--VES--FSQAQD--CLLPMGI 194 (452)
T ss_pred ceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhc-----cccCch--hhc--cccccc--cCcCHHH
Confidence 99999999999999999999999999999999999999998663211 001000 000 000000 1245999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCC--C-CC-cceEeecCCCCcc-cCHHHHhcCCC
Q 019555 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSG--R-GK-PFIIVDKDEGLEK-FDAAKLMKLRP 245 (339)
Q Consensus 171 ~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~--~-~~-~~~~~~~~~~~r~-~~~~~~~~~~~ 245 (339)
.+++||++||+++|++++|++++|+||..||.+++|+++|+|+.++.. + +. ....++.|+..|+ ++.+++++++|
T Consensus 195 ~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~ 274 (452)
T PLN02287 195 TSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKP 274 (452)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCC
Confidence 999999999999999999999999999999998899999999987531 1 11 1135788999998 99999999999
Q ss_pred CCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEE
Q 019555 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYY 325 (339)
Q Consensus 246 ~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~ 325 (339)
+|+|+|++|++|||+++|||+|+||++++.+++++.++++++.+++....++..++.+++.+++++|+++||+++|||++
T Consensus 275 v~~~~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DID~~ 354 (452)
T PLN02287 275 VFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLF 354 (452)
T ss_pred ccCCCCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeeccCCCccchHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 99888999999999999999999999999999998888889999886655555556678899999999999999999999
Q ss_pred EeecccccccccC
Q 019555 326 EINEAFSVRNHVP 338 (339)
Q Consensus 326 ~~hd~F~~~~l~~ 338 (339)
|+||+|+++++++
T Consensus 355 Ei~daFa~~~l~~ 367 (452)
T PLN02287 355 EINEAFASQFVYC 367 (452)
T ss_pred EecchHHHHHHHH
Confidence 9999999999875
No 30
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=5e-51 Score=391.99 Aligned_cols=316 Identities=29% Similarity=0.414 Sum_probs=259.1
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~ 92 (339)
++|+|||+++|||+|+.+.+.+.++.+|+.+|++++|+++|+++++||.+++|+..+...+.++++.++...|++..+|.
T Consensus 7 ~~V~Ivg~~rTpfg~~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~ 86 (427)
T PRK09268 7 RRVAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPA 86 (427)
T ss_pred CCEEEEecCcCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCce
Confidence 68999999999999988888899999999999999999999999999999999887644456788898888888656899
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhh-hhc-------cCCCCCcc----cccccc----c
Q 019555 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE-ARK-------GSRLGHDT----IVDGML----K 156 (339)
Q Consensus 93 ~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~-~~~-------~~~~~~~~----~~~~~~----~ 156 (339)
++|+++|+|+..++..|++.|++|.+|++|++|+|++|+.|..... .+. ...++... ..++.. .
T Consensus 87 ~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (427)
T PRK09268 87 YDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEI 166 (427)
T ss_pred eeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccccccccccC
Confidence 9999999999999999999999999999999999999987753321 110 00011000 000000 0
Q ss_pred cccccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-c
Q 019555 157 DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-F 235 (339)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~ 235 (339)
+..++++....|+..+++|+++||+++|++++|++++|+|+..+.+.++|+++|.|+. . ++.|+..|+ +
T Consensus 167 ~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~---------~-~~~D~~~r~~~ 236 (427)
T PRK09268 167 PRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL---------G-LTRDNNLRPDS 236 (427)
T ss_pred ccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCcc---------C-cccCCCCCCCC
Confidence 1122233345699999999999999999999999999999999999999999998972 1 567889998 9
Q ss_pred CHHHHhcCCCCCCC--CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEE-EeeEEeeeC---CCccccchHHHHH
Q 019555 236 DAAKLMKLRPSFKE--GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKI-RGFADAAQA---PEWFTTAPSLAIP 309 (339)
Q Consensus 236 ~~~~~~~~~~~~~~--~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i-~g~~~~~~~---~~~~~~~~~~a~~ 309 (339)
|.|+|++++|+|+| +|.+|++|||+++|||+|+||+|++.|++++.+|..+| .+.+...+. +..+..++..+++
T Consensus 237 t~e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~ 316 (427)
T PRK09268 237 SLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLLMAPAYAVP 316 (427)
T ss_pred CHHHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchhhccHHHHHH
Confidence 99999999999987 68899999999999999999999999999998885555 333333321 1345567788999
Q ss_pred HHHHHcCCCCCCCcEEEeecccccccccC
Q 019555 310 KAIANAGLEASQIDYYEINEAFSVRNHVP 338 (339)
Q Consensus 310 ~al~~agl~~~DId~~~~hd~F~~~~l~~ 338 (339)
++|+++|++++|||++|+||||+++++++
T Consensus 317 ~a~~~AGl~~~Did~~Ei~d~Fa~~~l~~ 345 (427)
T PRK09268 317 RLLARNGLTLQDFDFYEIHEAFASQVLAT 345 (427)
T ss_pred HHHHHcCCCHHHCCEEEeccccHHHHHHH
Confidence 99999999999999999999999997654
No 31
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=7.9e-51 Score=387.48 Aligned_cols=313 Identities=34% Similarity=0.479 Sum_probs=253.7
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCC-CCCcHHHHHHHHcCCCCCcc
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVV 91 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~-~~~~~~~~ia~~lgl~~~~~ 91 (339)
++|+|||+++|||+|+.+.+++.++.+|+.+|+++||+|+|+++++||.+++|+..... ..+++++...+..|++...|
T Consensus 2 ~~v~Ivg~~~Tpf~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p 81 (382)
T PRK07801 2 AEAYIVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVP 81 (382)
T ss_pred CceEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCc
Confidence 68999999999999987777789999999999999999999999999999998763222 12456777667788865579
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccC--CCcHH
Q 019555 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN--DFGMG 169 (339)
Q Consensus 92 ~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 169 (339)
.++++.+|+|+..++..|+++|++|++|+|||+|+|+++..|... ..+.+..++...... ....+..|+. ...+.
T Consensus 82 ~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~ 158 (382)
T PRK07801 82 GVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISS-AMTAGEQLGFTSPFA--ESKGWLHRYGDQEVSQF 158 (382)
T ss_pred eeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccc-cccccccccCCcccc--cCcchhhhccCCCCCHH
Confidence 999999999999999999999999999999999999998755311 111111111100000 0011222222 22344
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCC
Q 019555 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE 249 (339)
Q Consensus 170 ~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 249 (339)
..+++||++||+++|++++|++++|+|+..||++++|++++.|+.. +..|+..|++|.|+|+++||+++
T Consensus 159 ~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~----------~~~d~~~~~~t~e~~~~~~~i~~- 227 (382)
T PRK07801 159 RGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGG----------VTVDEGPRETSLEKMAGLKPLVE- 227 (382)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccC----------ccccCCcCcCCHHHHhcCCCCCC-
Confidence 4699999999999999999999999999999998899887777642 45688888999999999999994
Q ss_pred CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 250 ~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
.+|+|++|||+++|||+|+||++++.+++++.+|+++|.+++.....+.....++..+++++|+++|++++|||++|+||
T Consensus 228 ~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agi~~~did~~e~~d 307 (382)
T PRK07801 228 GGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDVVEINE 307 (382)
T ss_pred CCCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHhhccChHHHHHHHHHHcCCCHHHcCEeeecc
Confidence 47999999999999999999999999999998888999998877654433456678899999999999999999999999
Q ss_pred ccccccccCC
Q 019555 330 AFSVRNHVPT 339 (339)
Q Consensus 330 ~F~~~~l~~~ 339 (339)
||++++++|+
T Consensus 308 ~Fa~~~~~~~ 317 (382)
T PRK07801 308 AFAPVVLAWL 317 (382)
T ss_pred cchHHHHHHH
Confidence 9999998874
No 32
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.9e-50 Score=384.57 Aligned_cols=314 Identities=36% Similarity=0.540 Sum_probs=269.6
Q ss_pred CceEEEeeccCccccc-CCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCc
Q 019555 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~ 90 (339)
++|+|||+++|||+++ .+.+++.++.+|+.+|+++||+++|+++++||.+++|++.+... ++++++.++..+|++.++
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~ 81 (392)
T PRK07108 2 TEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV 81 (392)
T ss_pred CcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC
Confidence 6899999999999985 56678899999999999999999999999999999999887654 457999999999998668
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHH
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (339)
|+++++++|+|++.||..|+++|++|++|++|++|+|+||+.|.... ...++.... . +...+.+ ..|+.
T Consensus 82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~----~~~~~~~~~--~---~~~~~~~--~~m~~ 150 (392)
T PRK07108 82 PGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMN----RHMLREGWL--V---EHKPEIY--WSMLQ 150 (392)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCC----CcCccchhh--h---ccCCccc--cCHHH
Confidence 99999999999999999999999999999999999999998764221 000100000 0 0000101 24778
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCC-----C---CcceEeecCCCCcc-cCHHHHh
Q 019555 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGR-----G---KPFIIVDKDEGLEK-FDAAKLM 241 (339)
Q Consensus 171 ~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~-----~---~~~~~~~~~~~~r~-~~~~~~~ 241 (339)
.++++..+|+++|+++++++..+|+.|..+.+.+.|+++|+|+...... + +...+++.|+..|+ +|.|+++
T Consensus 151 ~ae~~a~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~ 230 (392)
T PRK07108 151 TAENVAKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVS 230 (392)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHh
Confidence 8888999999999999999999999999999999999999999875321 1 11256889999999 9999999
Q ss_pred cCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCC
Q 019555 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQ 321 (339)
Q Consensus 242 ~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~D 321 (339)
+++|+| ++|++|+.|||+++|||+|+||++++.|++++.+|+++|.|++....+|..++.+++.+++++|+++||+++|
T Consensus 231 ~l~~~~-~~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~D 309 (392)
T PRK07108 231 KIRSAL-PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDD 309 (392)
T ss_pred cCCCCC-CCCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCcccchhHHHHHHHHHHHcCCCHHH
Confidence 999999 6799999999999999999999999999999999988999999998777666678899999999999999999
Q ss_pred CcEEEeecccccccccC
Q 019555 322 IDYYEINEAFSVRNHVP 338 (339)
Q Consensus 322 Id~~~~hd~F~~~~l~~ 338 (339)
||++|+||+|+++++++
T Consensus 310 id~~ei~eafa~~~l~~ 326 (392)
T PRK07108 310 IDLWELNEAFAVQVLYC 326 (392)
T ss_pred cCchHhhhHHHHHHHHH
Confidence 99999999999999875
No 33
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=9.6e-51 Score=348.18 Aligned_cols=324 Identities=37% Similarity=0.533 Sum_probs=308.1
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCc
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~ 90 (339)
.+.|+||+.-||+|+.+.+.+++.+..+|..-|++.||+.+++.++.+|.+|+|++..++. +...++++.++.|++.+.
T Consensus 3 ~kgvfiVaAKRTaFGtfGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~ 82 (396)
T KOG1391|consen 3 GKGVFIVAAKRTAFGTFGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKET 82 (396)
T ss_pred cceEEEEEecccccccccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCcc
Confidence 4679999999999999999999999999999999999999999999999999999988654 567899999999999899
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHH
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (339)
|.+++++-|.|+.++|..+++.|.-|++++||++|.|.||..|+...+.|+|..+|..+.+....-.++.+++...+|++
T Consensus 83 pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~ 162 (396)
T KOG1391|consen 83 PALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAM 162 (396)
T ss_pred CceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhh
Confidence 99999999999999999999999999999999999999999999998889999999888776666668889999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCC
Q 019555 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (339)
Q Consensus 171 ~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~ 249 (339)
.++....+|.++||+.+.|+.++.++......+++|++||.|++++.++++ +.+.-||..|| +|+|+|.+++|+|++
T Consensus 163 TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge--~~f~vDEHpRp~TT~E~L~KLppvFkK 240 (396)
T KOG1391|consen 163 TAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGE--QTFQVDEHPRPQTTLEQLQKLPPVFKK 240 (396)
T ss_pred hHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCc--eeeEecCCCCccchHHHHhhCCchhcc
Confidence 999999999999999999999999999999999999999999999998887 67888999999 999999999999999
Q ss_pred CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 250 ~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
+|.+++.|.+-.+|||+|+|+.+++..+++..+|+++|.++...+.+|..|+.+|+++++.+|+++|++.+|||++|+++
T Consensus 241 dG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGIGPvPAI~~vLKksGlkl~DiDl~EvNE 320 (396)
T KOG1391|consen 241 DGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIGPVPAISGVLKKSGLKLKDIDLVEVNE 320 (396)
T ss_pred CCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccccCcHHHHHHHHHcCCcccccceEEech
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccc
Q 019555 330 AFSVRNHV 337 (339)
Q Consensus 330 ~F~~~~l~ 337 (339)
+|+.+.|+
T Consensus 321 AFApQ~LA 328 (396)
T KOG1391|consen 321 AFAPQYLA 328 (396)
T ss_pred hhchHHHH
Confidence 99998875
No 34
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.9e-48 Score=371.49 Aligned_cols=318 Identities=32% Similarity=0.445 Sum_probs=260.3
Q ss_pred CceEEEeeccCccccc-CCCCCCCCHHHHHHHHHHHHHHHc-CCCCCccCeEEEEeecCCC-CCCcHHHHHHHHcCCCCC
Q 019555 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNS 89 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~Al~da-gl~~~~Id~i~~g~~~~~~-~~~~~~~~ia~~lgl~~~ 89 (339)
++|+|||+++|||+|. .+.++++++.+|+.+|+++||+|+ |+++++||.+++|+..+.. .++..++.++..+|++ .
T Consensus 2 ~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~ 80 (406)
T PRK07851 2 PEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-F 80 (406)
T ss_pred CcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-C
Confidence 5899999999999984 567788999999999999999997 9999999999998765432 2456778899999996 5
Q ss_pred cceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccc-------------cccccc
Q 019555 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTI-------------VDGMLK 156 (339)
Q Consensus 90 ~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 156 (339)
+|.++++.+|+|+..++..|+++|++|.+|+|||+|+|+++..+.... .+.+. ++.... .++.+.
T Consensus 81 ~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
T PRK07851 81 LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNS-DSLPD-TKNPLFAEAQARTAARAEGGAEAWH 158 (406)
T ss_pred CCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCccccc-ccccc-cCchhhhhccccccccccccccccc
Confidence 899999999999999999999999999999999999999987552111 01000 000000 000011
Q ss_pred cccc---cccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCc
Q 019555 157 DGLW---DVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE 233 (339)
Q Consensus 157 ~~~~---~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r 233 (339)
..+. .|.....|+..+++|+++||+++++++.+++++|+++..+.+...+..++.|+..+.. ..+++|+..|
T Consensus 159 ~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~-----~~~~~d~~~r 233 (406)
T PRK07851 159 DPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDG-----TVVSTDDGPR 233 (406)
T ss_pred ccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCC-----ceeCCCCCcc
Confidence 1110 1111246788999999999999999999999999999888877778888888876541 2467888888
Q ss_pred c-cCHHHHhcCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHH
Q 019555 234 K-FDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312 (339)
Q Consensus 234 ~-~~~~~~~~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al 312 (339)
+ +|.|+|+++||+++|+|.+|++|||+++|||+|+||++++.+++++.+|+++|.|++.....+.....++..+++++|
T Consensus 234 ~~~t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al 313 (406)
T PRK07851 234 AGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQAL 313 (406)
T ss_pred CCcCHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCCCccchhHHHHHHHHH
Confidence 7 999999999999987777999999999999999999999999999999989999999986655444556789999999
Q ss_pred HHcCCCCCCCcEEEeecccccccccC
Q 019555 313 ANAGLEASQIDYYEINEAFSVRNHVP 338 (339)
Q Consensus 313 ~~agl~~~DId~~~~hd~F~~~~l~~ 338 (339)
+++|++++|||++|+||||+++++++
T Consensus 314 ~~Agi~~~did~~ei~d~f~~~~l~~ 339 (406)
T PRK07851 314 ARAGMSIDDIDLVEINEAFAAQVLPS 339 (406)
T ss_pred HHhCCCHHHCCeehhhhHHHHHHHHH
Confidence 99999999999999999999998875
No 35
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=4.8e-48 Score=362.84 Aligned_cols=291 Identities=32% Similarity=0.474 Sum_probs=253.7
Q ss_pred ceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCccee
Q 019555 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT 93 (339)
Q Consensus 14 ~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~ 93 (339)
+|+|||++||||+|+.+.+++.++.+|+..|++++++ |++ ++||.+++|++.+. ++++++.+++.+|++.++|.+
T Consensus 2 ~v~Ivg~~rTpfg~~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~--~~~~~r~~~~~~Gl~~~~p~~ 76 (361)
T PRK06690 2 RAVIVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP--GGNVARLSALEAGLGLHIPGV 76 (361)
T ss_pred cEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC--cchHHHHHHHHcCCCCCCCce
Confidence 6999999999999998889999999999999999854 896 89999999988654 367788899999998679999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHHH
Q 019555 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173 (339)
Q Consensus 94 ~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 173 (339)
+++++|+|++.++..|++.|++|++|++|++|+|+||+.|+.. +. .++. + +.. ...|++.++
T Consensus 77 tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~---~~--~~~~---------~-~~~---~~~~~~~a~ 138 (361)
T PRK06690 77 TIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQN---RA--RFSP---------E-TIG---DPDMGVAAE 138 (361)
T ss_pred ehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCccc---cc--ccCc---------c-ccc---CccHHHHHH
Confidence 9999999999999999999999999999999999999876421 10 0100 0 000 123999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHH-hcCCCCCCCCC
Q 019555 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKL-MKLRPSFKEGG 251 (339)
Q Consensus 174 ~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~-~~~~~~~~~~g 251 (339)
+|+++||+++|+++.|+..+|+|+..+.+.++|+++++|++- ++ |+.+|+ ++.|++ .+++|+|+|+|
T Consensus 139 ~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~----------~~-d~~~r~~~~~e~ll~~l~p~~~~~g 207 (361)
T PRK06690 139 YVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFNG----------LL-DESIKKEMNYERIIKRTKPAFLHNG 207 (361)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceecccC----------cc-ccccCCCCCHHHHhhcCCCcccCCC
Confidence 999999999999999999999999999999999999989751 34 788888 999999 55699998889
Q ss_pred ccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 252 ~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
++|+.|||+++|||+|+||++++.+++++.+|.++|.+++....++..+..+++.+++++|+++|++++|||++|+||+|
T Consensus 208 ~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eaf 287 (361)
T PRK06690 208 TVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAF 287 (361)
T ss_pred ceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCcccchhHHHHHHHHHHHHcCCCHHHcCEeeecchh
Confidence 99999999999999999999999999999999779999988766565556678899999999999999999999999999
Q ss_pred ccccccC
Q 019555 332 SVRNHVP 338 (339)
Q Consensus 332 ~~~~l~~ 338 (339)
+++++++
T Consensus 288 a~~~~~~ 294 (361)
T PRK06690 288 ASKVVAC 294 (361)
T ss_pred HHHHHHH
Confidence 9998875
No 36
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=100.00 E-value=1.3e-47 Score=347.20 Aligned_cols=262 Identities=49% Similarity=0.743 Sum_probs=225.0
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~ 91 (339)
|++|||||..||||+++.|.+++.++.+|+.++++++|+++++++++||.+++|++.+...++++++++++..|++..+|
T Consensus 1 M~~v~Iv~a~RTPfg~~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp 80 (264)
T PF00108_consen 1 MRDVVIVGAVRTPFGKFGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVP 80 (264)
T ss_dssp -TTEEEEEEEEE--ECTTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSE
T ss_pred CCCEEEEEeeeCccccCCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccc
Confidence 68999999999999999999999999999999999999999999999999999999987778899999999999987889
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHH
Q 019555 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (339)
Q Consensus 92 ~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (339)
.++|+++|+||+.||..|+..|++|++|++|++|+|+||+.|......+++..++.....+....+++.+++....|+..
T Consensus 81 ~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~Mg~t 160 (264)
T PF00108_consen 81 ATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSRRWGAPLGDAKLEDSLLRDGLYDPYAGQPMGIT 160 (264)
T ss_dssp EEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCTTSTSSSSGEEEEEHHHHHTTCCTTTTSHHHHH
T ss_pred eeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccccccccccccccccCccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999887765566666776555666666678888888999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCCC
Q 019555 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250 (339)
Q Consensus 172 a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~ 250 (339)
+++++++||++||++++|++++|++|..+.++++|++||.|++.+.+++++ .+++.|+++|+ ++.|+|.+++|+|+++
T Consensus 161 AE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~g~~-~~~~~De~~r~~~~~e~l~~L~p~f~~~ 239 (264)
T PF00108_consen 161 AENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKKGEE-VTVDRDEGIRPDTTLEKLAKLKPAFRKD 239 (264)
T ss_dssp HHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETTSEE-EEE-S-STCGTT--HHHHHTS-BSSSTT
T ss_pred cccccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeeccccce-eeeeccchhhcchhHHHHhccccccccc
Confidence 999999999999999999999999999999999999999999998766654 67899999999 9999999999999987
Q ss_pred -CccccccCCcccccceeEEEeCHH
Q 019555 251 -GSVTAGNASIISDGAAALVLVSGV 274 (339)
Q Consensus 251 -g~l~~~~~~~~~DGAaAviL~s~~ 274 (339)
|.+|+.|+|+++|||+++||+++|
T Consensus 240 ~G~vTagnss~~~DGAaa~~l~see 264 (264)
T PF00108_consen 240 GGTVTAGNSSPLNDGAAAVLLMSEE 264 (264)
T ss_dssp TSS-BTTTB--BEEEEEEEEEEEHH
T ss_pred ccccccccCCCccchhheEEEeecC
Confidence 999999999999999999999875
No 37
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=6.8e-47 Score=359.66 Aligned_cols=281 Identities=19% Similarity=0.128 Sum_probs=227.9
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCCCcc
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSVV 91 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~~~~ 91 (339)
++|+|||++.|||+|+.+ .+..+|+.+|+++||+|+|+++++||.+++++......+ ...+..++..+|+. ..|
T Consensus 9 ~~vaIvG~g~t~~~~~~~----~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~ 83 (392)
T PRK06065 9 KRVAVIGAGLTLFRRRLL----ETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKP 83 (392)
T ss_pred CceEEEEecccCCcCCCC----CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCC
Confidence 689999999999999864 789999999999999999999999999999753222222 33667788999987 479
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccC---CCcH
Q 019555 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN---DFGM 168 (339)
Q Consensus 92 ~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 168 (339)
.++++.+|+|+..+|..|+++|++|.+|+|||+|+|+++.... ...... .. ..++ .+..|+. ...+
T Consensus 84 ~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~-~~~~~~----~~--~~~~----~~~~p~g~~~~~~~ 152 (392)
T PRK06065 84 VSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARP-HPQAVF----RY--IWDP----ILEKPLNPNLIWIF 152 (392)
T ss_pred eEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeeccccccc-chhHHH----hh--hccc----hhccCCCccHHHHH
Confidence 9999999999999999999999999999999999999764211 000000 00 0001 1112332 2358
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCC
Q 019555 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (339)
Q Consensus 169 ~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 248 (339)
++.+++||++||+++|++++|++++|+||.+||+ +++++ ++|.|+|+++|||++
T Consensus 153 Al~a~rym~~yG~~~e~lA~vav~~~~~A~~NP~-A~~r~-------------------------~lt~e~vl~s~~ia~ 206 (392)
T PRK06065 153 AMEMHRYMATYGIKKEEIALVSVKNKRNALNNPY-AQLGS-------------------------KITVEDVLKSEVLVW 206 (392)
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHHhhccCch-hhhcC-------------------------CCCHHHHhcCCcccC
Confidence 9999999999999999999999999999999997 66653 389999999999995
Q ss_pred CCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC------CccccchHHHHHHHHHHcCCCC--C
Q 019555 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP------EWFTTAPSLAIPKAIANAGLEA--S 320 (339)
Q Consensus 249 ~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~------~~~~~~~~~a~~~al~~agl~~--~ 320 (339)
|+|++|||+++|||+|+||+|++.|++++.+| ++|.|++...+.. .....+++.+++++|+++|+++ +
T Consensus 207 ---Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~ 282 (392)
T PRK06065 207 ---PVQLLDVSPVSDGAAAIVLASEDLARRYTDTP-VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRK 282 (392)
T ss_pred ---CCchhhcCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchh
Confidence 89999999999999999999999999998888 7899999865321 1112234689999999999985 9
Q ss_pred CCcEEEeecccccccccCC
Q 019555 321 QIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 321 DId~~~~hd~F~~~~l~~~ 339 (339)
|||++|+||||++++++++
T Consensus 283 diD~~ei~D~Fs~~~l~~~ 301 (392)
T PRK06065 283 EIDVAEPYDPFDYKELHHL 301 (392)
T ss_pred hCcEEEecCCChHHHHHHH
Confidence 9999999999999998764
No 38
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=6e-47 Score=364.38 Aligned_cols=291 Identities=17% Similarity=0.100 Sum_probs=231.7
Q ss_pred CCcccCCCCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHH-HHHH
Q 019555 5 EPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQ-AALG 83 (339)
Q Consensus 5 ~~~~~~~~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~-ia~~ 83 (339)
++-++.+|++|+|||+++|||+|.. .+.+..+|+.+|+++||+|+|+++++||.+++++......++.+++. ++..
T Consensus 8 ~~~~~~~m~~VaIvG~g~Tpfgr~~---~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~ 84 (430)
T PRK06365 8 QLKMKKKSRDVYMVAAGVTKFDKAS---PYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDY 84 (430)
T ss_pred cchhhhhccCEEEEEeeecCccccC---CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHh
Confidence 3444556789999999999999852 24788999999999999999999999999888765544445555554 5789
Q ss_pred cCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccccc
Q 019555 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (339)
Q Consensus 84 lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (339)
+|+++ .|.++++.+|+|+..+|..|++.|++|.+++|||+|+|+++..+......... .. .+. .+..|+
T Consensus 85 lGl~~-~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~--~~----~d~----~~~~~~ 153 (430)
T PRK06365 85 LGLVP-KPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIA--LA----SDT----NFDYPL 153 (430)
T ss_pred cCCCC-CceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhc--cc----ccc----cccccc
Confidence 99985 89999999999999999999999999999999999999998755321100000 00 000 111121
Q ss_pred C---CCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHH
Q 019555 164 N---DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL 240 (339)
Q Consensus 164 ~---~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 240 (339)
. ...+++.+++||++||+++|+++.|++++|+||.+||+ ++++. ++|.|+|
T Consensus 154 g~~~~~~~al~a~ry~~~yG~t~e~la~vav~~~~~A~~NP~-A~~~~-------------------------~~t~e~v 207 (430)
T PRK06365 154 GGFYTGYYAMMAVRHMYEFGTTVEQLAKVSVKNHGNAIHNPF-AQSPM-------------------------KITVEDV 207 (430)
T ss_pred cCccHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhCcH-hhcCC-------------------------CCCHHHH
Confidence 1 24589999999999999999999999999999999997 44432 2789999
Q ss_pred hcCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeee--CCCccc-----------------
Q 019555 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQ--APEWFT----------------- 301 (339)
Q Consensus 241 ~~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~--~~~~~~----------------- 301 (339)
+++|+++ +|+|++|||+++|||+|+||+|++.|++++.+| ++|.+++.... ++..+.
T Consensus 208 ~~s~~i~---~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~p-v~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (430)
T PRK06365 208 RKSPMVS---YPLTRLDVCAMSDGAACAILASEDKAFEITDKP-VLIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKD 283 (430)
T ss_pred hcCCccc---cCcchhhcCCcCCceEEEEEecHHHHHhcCCCC-eEEEEEEEeccccccccccccccccccccccccccc
Confidence 9999998 489999999999999999999999999998887 78888877643 111110
Q ss_pred -------c--chHHHHHHHHHHcCCC--CCCCcEEEeecccccccccCC
Q 019555 302 -------T--APSLAIPKAIANAGLE--ASQIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 302 -------~--~~~~a~~~al~~agl~--~~DId~~~~hd~F~~~~l~~~ 339 (339)
. ....+++++|+++||+ ++|||++|+||||++++++++
T Consensus 284 ~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~~l~~l 332 (430)
T PRK06365 284 LRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSSEIQTY 332 (430)
T ss_pred cccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHHHHHHH
Confidence 0 1247999999999998 799999999999999998764
No 39
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=9.8e-47 Score=360.02 Aligned_cols=283 Identities=22% Similarity=0.277 Sum_probs=232.0
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~ 92 (339)
++|+|||+++|||+|+. +.++.+|+.+|+++||+|+|+++++||.+++++..+......++..++..+|++ ..+.
T Consensus 1 ~~v~IvG~g~t~~~~~~----~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~ 75 (385)
T PRK12578 1 RRVAVIGVGNSKFGRRD----DVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVP 75 (385)
T ss_pred CceEEEeecccceeecC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCe
Confidence 57999999999999975 488999999999999999999999999999998765433345678899999997 4678
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccc-cccC---CCcH
Q 019555 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLW-DVYN---DFGM 168 (339)
Q Consensus 93 ~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~ 168 (339)
++++.+|+|+..+|..|+.+|++|.+++|||+|+|.++..+....... ..... +. .+. .|+. ...+
T Consensus 76 ~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~-~~~~~-----~~----~~~~~~~g~~~~~~~ 145 (385)
T PRK12578 76 LRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAI-GGRGG-----NY----QWEYHFYGTTFPTYY 145 (385)
T ss_pred eEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhh-ccccc-----cc----ccccccCCCChHHHH
Confidence 999999999999999999999999999999999999987543211000 00000 00 011 1221 2356
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCC
Q 019555 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (339)
Q Consensus 169 ~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 248 (339)
++.+++||++||+++|++++|++++|+|+..||+ ++|+++ ++.++|+++|++++
T Consensus 146 a~~a~~~m~~~g~t~e~~a~va~~~~~~A~~np~-a~~~~~-------------------------i~~e~v~~s~~i~~ 199 (385)
T PRK12578 146 ALYATRHMAVYGTTEEQMALVSVKAHKYGAMNPK-AHFQKP-------------------------VTVEEVLKSRAISW 199 (385)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHhcCCh-hhcCCC-------------------------CCHHHHhcCCccCC
Confidence 7889999999999999999999999999999995 777653 67889999999984
Q ss_pred CCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeC------CCcccc-chHHHHHHHHHHcCCCCCC
Q 019555 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA------PEWFTT-APSLAIPKAIANAGLEASQ 321 (339)
Q Consensus 249 ~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~------~~~~~~-~~~~a~~~al~~agl~~~D 321 (339)
|+|++|||+++|||+|+||++++.+++++.++.++|.|++...+. +..... ++..+++++|+++|++++|
T Consensus 200 ---Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~D 276 (385)
T PRK12578 200 ---PIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPND 276 (385)
T ss_pred ---CccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHH
Confidence 799999999999999999999999999986666999999987541 111121 3568999999999999999
Q ss_pred CcEEEeecccccccccCC
Q 019555 322 IDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 322 Id~~~~hd~F~~~~l~~~ 339 (339)
||++|+||||++++++++
T Consensus 277 iD~~ei~d~ft~~~l~~l 294 (385)
T PRK12578 277 IEVATVHDAFTIAEIMGY 294 (385)
T ss_pred CCEEEecCcChHHHHHHH
Confidence 999999999999998763
No 40
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.6e-46 Score=357.76 Aligned_cols=280 Identities=19% Similarity=0.112 Sum_probs=230.0
Q ss_pred CCCceEEEeeccCcc-cccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-C-CcHHHHHHHHcCCC
Q 019555 11 KARDVCIVGVARTPM-GGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-G-QAPARQAALGAGIP 87 (339)
Q Consensus 11 ~~~~v~IvG~~~t~~-~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~-~~~~~~ia~~lgl~ 87 (339)
||++|+|||+++|+| +|+. ++++.+|+.+|+++||+|+|+++++||.+++++. ++.. + ..++..++..||+.
T Consensus 1 ~~~~v~IvG~g~t~~~~~~~----~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~-~~~~~~~~~~~~~va~~LGl~ 75 (386)
T PRK08313 1 MKRLAAVLGTGQTKYVAKRQ----DVSMAGLVREAIDRALADAGLTWDDIDAVVVGKA-PDFFEGVMMPELFLADALGAT 75 (386)
T ss_pred CCCcEEEEEeecCCcCccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-ccccccccCchHHHHHhcCCC
Confidence 578999999999999 6664 4789999999999999999999999999998862 3221 1 23456888999997
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccccc---C
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY---N 164 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 164 (339)
..+.++++.+|+++..++..|+++|++|.+++|||+|+|+++....... . . .. ..+..|+ .
T Consensus 76 -~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~-----~--~----~~----~~~~~~~g~~~ 139 (386)
T PRK08313 76 -GKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWA-----L--S----IP----VPFTKPVGAGA 139 (386)
T ss_pred -CCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccc-----c--c----cc----cccccccccch
Confidence 4789999999999999999999999999999999999999876311110 0 0 00 0112222 2
Q ss_pred CCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCC
Q 019555 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (339)
Q Consensus 165 ~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 244 (339)
+..+++.+++||++||+++|++++|++++|.||.+||+ ++|++ +++|.|+|+++|
T Consensus 140 ~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~-A~~r~------------------------~~~t~e~v~~s~ 194 (386)
T PRK08313 140 GGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPY-AHLHQ------------------------PDITLEKVMASQ 194 (386)
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcH-HhcCC------------------------CCCCHHHHhcCC
Confidence 35688999999999999999999999999999999996 66653 128999999999
Q ss_pred CCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----C-ccccchHHHHHHHHHHcCCC
Q 019555 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----E-WFTTAPSLAIPKAIANAGLE 318 (339)
Q Consensus 245 ~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~-~~~~~~~~a~~~al~~agl~ 318 (339)
|+++ |+|++|||+++|||+|+||+|++.+++++.+|.++|.|++...+.. . ....+...+++++|+++|++
T Consensus 195 ~ia~---Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~ 271 (386)
T PRK08313 195 MLWD---PIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGIT 271 (386)
T ss_pred cccC---CCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCC
Confidence 9995 6999999999999999999999999998878878999999875421 1 11234568999999999998
Q ss_pred --CCCCcEEEeecccccccccCC
Q 019555 319 --ASQIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 319 --~~DId~~~~hd~F~~~~l~~~ 339 (339)
++|||++|+|||||+++++++
T Consensus 272 ~p~~Did~~el~d~F~~~~~~~~ 294 (386)
T PRK08313 272 DPRDEIDVAEIYVPFSWFEPMWL 294 (386)
T ss_pred CChhhCCEEEeccCChHHHHHHH
Confidence 699999999999999998763
No 41
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=100.00 E-value=3.3e-46 Score=356.90 Aligned_cols=284 Identities=20% Similarity=0.225 Sum_probs=226.5
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~ 92 (339)
++|+|||+++|||+|+. +.++.+|+.+|+++||+|+||++++||.+++|+.............++..+|++ ..|.
T Consensus 7 ~~v~IvG~g~tp~~~~~----~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~ 81 (398)
T PRK06157 7 DKVAILGMGCTKFGERW----DAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPV 81 (398)
T ss_pred CCeEEEEeccccccccC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCE
Confidence 78999999999999864 478999999999999999999999999999987654221122235577889997 4899
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHH
Q 019555 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (339)
Q Consensus 93 ~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (339)
++++.+|+|+..+|.+|++.|++|++|+||++|+|++++.++...... ..+ ..+. ....++ .+ ...+++.+
T Consensus 82 ~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~---~~~--~~~~-~~~~~~-~~--~~~~al~a 152 (398)
T PRK06157 82 TRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVA---NPG--TLAD-MTMPNV-TA--PGNFAQLA 152 (398)
T ss_pred EEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccccccc---ccc--cchh-cccccC-ch--HHHHHHHH
Confidence 999999999999999999999999999999999999987553211000 000 0000 000011 11 13588999
Q ss_pred HHHHHHcCCCHHHH----HHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCC
Q 019555 173 EICANKHTITRDEQ----DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (339)
Q Consensus 173 ~~~~~~~g~~~~~~----~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 248 (339)
++||++||+++|++ ++|++++|+|+..||+ +++++ ++|.|+|++++|+++
T Consensus 153 ~~~~~~yG~t~e~~~~~~a~vav~~~~~A~~np~-A~~r~-------------------------~~t~e~v~~s~~v~~ 206 (398)
T PRK06157 153 SAYAAKYGVSREDLKRAMAHVSVKSHANGARNPK-AHLRK-------------------------AVTEEQVLKAPMIAG 206 (398)
T ss_pred HHHHHHhCCCHHHHcccccHHHHHHHHHHhcCCh-hhcCC-------------------------CCCHHHHhcCCcccC
Confidence 99999999999999 8999999999999996 34432 289999999999995
Q ss_pred CCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-------Ccc--ccchHHHHHHHHHHcCCC-
Q 019555 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-------EWF--TTAPSLAIPKAIANAGLE- 318 (339)
Q Consensus 249 ~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-------~~~--~~~~~~a~~~al~~agl~- 318 (339)
|++++|||+++|||+|+||+|++.|++++.++.++|.|++...+.. .+. ...++.+++++|+++||+
T Consensus 207 ---Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~ 283 (398)
T PRK06157 207 ---PLGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITD 283 (398)
T ss_pred ---CCchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccHHHHHHHHHHHHHcCCCC
Confidence 7999999999999999999999999999874559999998874311 011 112467999999999998
Q ss_pred -CCCCcEEEeecccccccccCC
Q 019555 319 -ASQIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 319 -~~DId~~~~hd~F~~~~l~~~ 339 (339)
++|||++|+||||++++|+++
T Consensus 284 ~~~Did~~Ei~D~Fs~~~l~~~ 305 (398)
T PRK06157 284 PREELSMAEVHDCFSITELVTM 305 (398)
T ss_pred chhcCCEEEEecCChHHHHHHH
Confidence 799999999999999998864
No 42
>PRK08256 lipid-transfer protein; Provisional
Probab=100.00 E-value=2.5e-46 Score=357.78 Aligned_cols=288 Identities=20% Similarity=0.227 Sum_probs=228.4
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~ 92 (339)
.+|+|||+++|||+|.. ++.+..+|+.+|+++||+|+|+++++||.+++|+..+.... ...+...+|+. +.+.
T Consensus 1 ~~v~IvG~~~t~~~~~~---~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~ 73 (391)
T PRK08256 1 NKVFVAGVGMTPFEKPG---ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPI 73 (391)
T ss_pred CcEEEEeccccccccCC---CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCC
Confidence 36999999999999753 35788999999999999999999999999999887654321 23456788996 5789
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhh-hhhccCCCCCcc-ccccccc-cccccccCCCcHH
Q 019555 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLA-EARKGSRLGHDT-IVDGMLK-DGLWDVYNDFGMG 169 (339)
Q Consensus 93 ~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~-~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~ 169 (339)
++++.+|+|+..+|..|+++|++|++|+||++|+|+++..+.... ..+. ..++... ..+.+.. .++ +.....|+
T Consensus 74 ~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~a 150 (391)
T PRK08256 74 VNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRP-SPLERFDKALAELQGFDPA--PPALRMFG 150 (391)
T ss_pred cccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccccccccccccc-chhhhhhhhhhhhcccccC--CccHHHHH
Confidence 999999999999999999999999999999999999976442110 0110 0010000 0000000 001 11124689
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCC
Q 019555 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE 249 (339)
Q Consensus 170 ~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 249 (339)
+.+++||++||+++|+++.|++++|+||..||+ ++|++ ++|.|+|+++||+++
T Consensus 151 ~~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~-A~~~~-------------------------~~t~e~~~~s~~i~~- 203 (391)
T PRK08256 151 GAGREHMEKYGTTAETFAKIGVKARRHAANNPY-AQFRD-------------------------EYTLEDVLASPMIWG- 203 (391)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhhhcCCh-hhcCC-------------------------CCCHHHHhcCCcccC-
Confidence 999999999999999999999999999999995 56553 389999999999995
Q ss_pred CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccc----------cchHHHHHHHHHHcCCCC
Q 019555 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT----------TAPSLAIPKAIANAGLEA 319 (339)
Q Consensus 250 ~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~----------~~~~~a~~~al~~agl~~ 319 (339)
|+|++|||+++|||+|+||++++.+++++.+++++|.|++...+.+..+. ..+..+++++|+++|+++
T Consensus 204 --Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~ 281 (391)
T PRK08256 204 --PLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGP 281 (391)
T ss_pred --CCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCH
Confidence 79999999999999999999999999998677799999988765432211 124679999999999999
Q ss_pred CCCcEEEeecccccccccCC
Q 019555 320 SQIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 320 ~DId~~~~hd~F~~~~l~~~ 339 (339)
+|||++|+||||++++++|+
T Consensus 282 ~DiD~~ei~d~f~~~~l~~l 301 (391)
T PRK08256 282 EDIDVVELHDCFSANELLTY 301 (391)
T ss_pred HHCCEEeeccCCcHHHHHHH
Confidence 99999999999999998864
No 43
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.7e-46 Score=357.77 Aligned_cols=294 Identities=17% Similarity=0.212 Sum_probs=227.4
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-C-cHHH-HHHHHcCCCC
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-Q-APAR-QAALGAGIPN 88 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~-~~~~-~ia~~lgl~~ 88 (339)
+++|+|||+++|||+|++ ..++.++.+|+.+|+++||+|+|+++++||.+++++..++... + ..+. ......++.
T Consensus 2 ~~~v~Ivg~~~t~~~r~~-~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (403)
T PRK06289 2 SDDVWVLGGYQSDFARNW-TKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALW- 79 (403)
T ss_pred CCcEEEEeCCcCcccccc-CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcCC-
Confidence 468999999999999863 3356899999999999999999999999999999877554211 1 1111 111223453
Q ss_pred CcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccC-CCc
Q 019555 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN-DFG 167 (339)
Q Consensus 89 ~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 167 (339)
+.|.++++.+|+|+..+|..|+.+|++|++++|||+|+|+++..+........+. .. +.....+..|+. ...
T Consensus 80 g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~ 152 (403)
T PRK06289 80 GVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGA----AA---WTGHEGQDARFPWPSM 152 (403)
T ss_pred CCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhc----cc---ccccccccCCCccHHH
Confidence 4689999999999999999999999999999999999999987543221111110 00 000112222222 245
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
|++.+++||++||+++|+++.|++++|+||.+||+ ++++..+.+ .+++.++++.+|++.
T Consensus 153 ~al~a~~y~~~yG~t~e~la~va~~~~~~A~~NP~-A~~~~~~~~--------------------~~~~~~d~~~s~~i~ 211 (403)
T PRK06289 153 FARVADEYDRRYGLDEEHLRAIAEINFANARRNPN-AQTRGWAFP--------------------DEATNDDDATNPVVE 211 (403)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHccCcH-hhcCccccc--------------------cccchhhhhcCCccc
Confidence 88999999999999999999999999999999997 666643110 137788899999986
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCC-CccEEEEeeEEeeeC-------------CCccccchHHHHHHHHH
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGL-QVIAKIRGFADAAQA-------------PEWFTTAPSLAIPKAIA 313 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~-~~~~~i~g~~~~~~~-------------~~~~~~~~~~a~~~al~ 313 (339)
+|+|++|||+++|||+|+||++++.+++++. +|.++|.|++..... +..+ ..+..+++++|+
T Consensus 212 ---~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~aa~~a~~ 287 (403)
T PRK06289 212 ---GRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL-PHVRQAVLDAYR 287 (403)
T ss_pred ---CCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEecccccccccccccccccccc-HHHHHHHHHHHH
Confidence 5899999999999999999999999999886 566899999987442 1111 224679999999
Q ss_pred HcCCCCCCCcEEEeecccccccccCC
Q 019555 314 NAGLEASQIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 314 ~agl~~~DId~~~~hd~F~~~~l~~~ 339 (339)
++|++++|||++|+||||++++++++
T Consensus 288 ~Agi~~~Didv~el~D~fa~~~l~~l 313 (403)
T PRK06289 288 RAGVGLDDLDGFEVHDCFTPSEYLAI 313 (403)
T ss_pred HcCCCHHHCeEEeeeccchHHHHHHH
Confidence 99999999999999999999999864
No 44
>PRK06158 thiolase; Provisional
Probab=100.00 E-value=5.4e-46 Score=354.11 Aligned_cols=274 Identities=22% Similarity=0.197 Sum_probs=223.7
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~ 91 (339)
..+|+|||+++|||+|.. ++++.+|+.+|+++||+|+|+++++||.+++++... ..+...++..||++ ..+
T Consensus 7 ~~~vaIvG~g~t~~~~~~----~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~----~~~~~~la~~lGl~-~~~ 77 (384)
T PRK06158 7 RGRTAIVGAATAGLGEAP----GLSAMELLAQAAHRALADAGLTMADVDGLFTASPDD----ALWGLSVAEYLGIR-PRF 77 (384)
T ss_pred CCCEEEEEeeeccceeCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC----CCcHHHHHHHcCCC-Cee
Confidence 478999999999998874 489999999999999999999999999999886422 22335688999997 468
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCceEEEE-ccccccCCcchhhhhhccCCCCCccccccccccccccccC----CC
Q 019555 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAG-GMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN----DF 166 (339)
Q Consensus 92 ~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~-g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 166 (339)
.+.++.+|+++..+|..|+++|++|.+|+|||+ |.|.++... ... ... .+ ..+..|+. ..
T Consensus 78 ~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~-~~~-----~~~------~~---~~~~~~~g~~~~~~ 142 (384)
T PRK06158 78 VDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGG-KLR-----SML------DP---QPYEAPYKPVNPVS 142 (384)
T ss_pred eccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcc-ccc-----ccc------cc---cchhcccCCCCcHH
Confidence 888999999999999999999999999999987 666554311 000 000 00 01112221 24
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCC
Q 019555 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (339)
Q Consensus 167 ~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 246 (339)
.+++.+++||++||+++|+++++++++|+||..||+ +++++ ++|.|+|+++|||
T Consensus 143 ~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~-A~~~~-------------------------~~t~e~vl~s~~i 196 (384)
T PRK06158 143 AYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPE-AFMRD-------------------------PLTIDDVLAARMV 196 (384)
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCch-hhhCC-------------------------CCCHHHHhcCCcc
Confidence 589999999999999999999999999999999996 56553 3899999999999
Q ss_pred CCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC------CccccchHHHHHHHHHHcCCCCC
Q 019555 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP------EWFTTAPSLAIPKAIANAGLEAS 320 (339)
Q Consensus 247 ~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~------~~~~~~~~~a~~~al~~agl~~~ 320 (339)
++ |++++|||+++|||+|+||++++.+++++.+| ++|.|++...+.. .....+...+++++|+++|++++
T Consensus 197 a~---Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~ 272 (384)
T PRK06158 197 SD---PLSVRDCCLVTDGAGAVVMVRADRARDLPRPP-VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPA 272 (384)
T ss_pred CC---CCchhhcCCccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHH
Confidence 85 89999999999999999999999999988777 8999998775421 11123346799999999999999
Q ss_pred CCcEEEeecccccccccCC
Q 019555 321 QIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 321 DId~~~~hd~F~~~~l~~~ 339 (339)
|||++|+|||||+++++|+
T Consensus 273 DId~~ElyD~Fs~~~l~~~ 291 (384)
T PRK06158 273 DIDVVELYDAFTINTILFL 291 (384)
T ss_pred HCcEEEecCCchHHHHHHH
Confidence 9999999999999999874
No 45
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.1e-45 Score=347.83 Aligned_cols=278 Identities=19% Similarity=0.169 Sum_probs=218.8
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcC-CCC-CccCeEEEEeecCCCCCC-cHHHHHHHHcCCCC
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRAN-VKP-LLVQEVFFGNVLSANLGQ-APARQAALGAGIPN 88 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dag-l~~-~~Id~i~~g~~~~~~~~~-~~~~~ia~~lgl~~ 88 (339)
|++|+|||+++|||+|+. ++++..+|+.+|+++||+||| +++ ++||.++++.. ..+.+. .....+...+|+.
T Consensus 3 ~~~vaIvG~g~t~~~~~~---~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~-~~~~~~~~~~~~~~~~lg~~- 77 (385)
T PRK06066 3 LNRVAIVGIGWYGFRPTT---PEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE-DFWEGIAIADEFAPDQIGGA- 77 (385)
T ss_pred CCcEEEEEeeecCCcCCC---CCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC-cccCcccccchhHHHHcccC-
Confidence 578999999999999642 248899999999999999999 997 79999987532 211111 1123455778885
Q ss_pred CcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccC---C
Q 019555 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN---D 165 (339)
Q Consensus 89 ~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 165 (339)
..|.+.+ |+|+..++.+|+.+|++|.+|+|||+|+|+++.... .. .. .+. ..++ .+..|++ +
T Consensus 78 ~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~-~~-~~----~~~--~~~~----~~~~p~g~~~p 142 (385)
T PRK06066 78 MRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILT-FS-DV----VKF--AMDP----IYVRPIGPPNP 142 (385)
T ss_pred CCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccc-hh-hh----hhc--ccCc----ceecccCCCcH
Confidence 3577666 889999999999999999999999999998765211 00 00 000 0011 1222322 1
Q ss_pred -CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCC
Q 019555 166 -FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (339)
Q Consensus 166 -~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 244 (339)
..+++.+++||++||+++|++++|++++|+||.+||+ ++|++ ++|.|+|+++|
T Consensus 143 ~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~NP~-A~~r~-------------------------~~t~edvl~S~ 196 (385)
T PRK06066 143 HFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLSNPR-ASYAS-------------------------NISLEDVLSSE 196 (385)
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCCh-hhcCC-------------------------CCCHHHHhcCC
Confidence 2468999999999999999999999999999999997 56654 28999999999
Q ss_pred CCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeee----CCCccccch--HHHHHHHHHHcCCC
Q 019555 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQ----APEWFTTAP--SLAIPKAIANAGLE 318 (339)
Q Consensus 245 ~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~----~~~~~~~~~--~~a~~~al~~agl~ 318 (339)
||++ |+|++|||+++|||+|+||++++.+++++.+| ++|.|++...+ .+.++...+ ..+++++|+++||+
T Consensus 197 ~ia~---Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~p-v~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~ 272 (385)
T PRK06066 197 YVVY---PLTELDIAPFVDGAIVVVLASEEVAKKLTDDP-VWIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIE 272 (385)
T ss_pred cccC---CchhhccCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCC
Confidence 9995 89999999999999999999999999999888 69999998653 223333333 37999999999998
Q ss_pred --CCCCcEEEeecccccccccCC
Q 019555 319 --ASQIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 319 --~~DId~~~~hd~F~~~~l~~~ 339 (339)
++|||++|+||||++++++++
T Consensus 273 ~p~~DiD~~ei~D~Ft~~~l~~~ 295 (385)
T PRK06066 273 SPRKEVDAAEVDDRYSYKELQHI 295 (385)
T ss_pred CCHHHCcEEEEecCChHHHHHHH
Confidence 799999999999999998764
No 46
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.5e-45 Score=349.96 Aligned_cols=279 Identities=17% Similarity=0.139 Sum_probs=223.7
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~ 92 (339)
.+|+|||+++|+|+|+.+ +++.+|+.+|+++||+|+||++++||.+++... ..+.. ...++..||+. ..+.
T Consensus 5 ~~vaIvG~g~t~~~~~~~----~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~---~~~~~-~~~~~~~lGl~-~~~~ 75 (388)
T PRK08142 5 GKAYIVGAYEHPTRKAPD----KSVAQLHAEVAKGALADAGLSLADVDGYFCAGD---APGLG-PASMVDYLGLK-LRHV 75 (388)
T ss_pred CCEEEEEEeeccceeCCC----CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC---CCCcc-HHHHHHhCCCC-Ceee
Confidence 689999999999999754 789999999999999999999999999765211 11111 23488999997 4688
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhh-hhhccCCCCCcccccccccccccccc---CCCcH
Q 019555 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLA-EARKGSRLGHDTIVDGMLKDGLWDVY---NDFGM 168 (339)
Q Consensus 93 ~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 168 (339)
..+..+|+|+..+|..|+..|++|.+|+|||+|+|++........ ...+..... + ..+..|+ ....+
T Consensus 76 ~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~g~~~~~~~ 146 (388)
T PRK08142 76 DSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAP-----D----APFEAPYGPTTHNLY 146 (388)
T ss_pred ccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCcccccccccccccc-----c----cchhcccccccHHHH
Confidence 899999999999999999999999999999999998754211000 000000000 0 0111121 13568
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCC
Q 019555 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (339)
Q Consensus 169 ~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 248 (339)
++.+++||++||+++|+++.+++++|+||.+||+ ++|++ ++|.|+|+++|+|++
T Consensus 147 Al~a~~ym~~yG~t~e~la~vav~~~~~A~~NP~-A~~r~-------------------------~~t~e~vl~s~~Ia~ 200 (388)
T PRK08142 147 AMCAMRHMHEYGTTSEQLAWIKVAASHHAQHNPH-AMLRD-------------------------VVTVEDVLNSPMIAD 200 (388)
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHHHhccCCh-hhcCC-------------------------CCCHHHHhcCCcccC
Confidence 9999999999999999999999999999999996 66664 389999999999995
Q ss_pred CCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeC-----CCccccchHHHHHHHHHHcCCCCCCCc
Q 019555 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 249 ~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~DId 323 (339)
|+|++|||+++|||+|+||++++.|++++.++ ++|.|++...+. +.......+.+++++|+++|++++|||
T Consensus 201 ---Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did 276 (388)
T PRK08142 201 ---PLHRLDCCVVTDGGGALVVVRPEIARSLKRPL-VKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIK 276 (388)
T ss_pred ---CchhhccCcccCceEEEEEecHHHHhhcCCCC-EEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCC
Confidence 89999999999999999999999999997655 999999987541 111223456899999999999999999
Q ss_pred EEEeecccccccccCC
Q 019555 324 YYEINEAFSVRNHVPT 339 (339)
Q Consensus 324 ~~~~hd~F~~~~l~~~ 339 (339)
++|+|||||+++++|+
T Consensus 277 ~~elyD~Fs~~~~~~~ 292 (388)
T PRK08142 277 YASIYDSFTITVLMQL 292 (388)
T ss_pred EEEEeccchHHHHHHH
Confidence 9999999999998874
No 47
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.3e-45 Score=351.23 Aligned_cols=282 Identities=26% Similarity=0.300 Sum_probs=232.8
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC--CCcHHHHHHHHcCCCCCc
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL--GQAPARQAALGAGIPNSV 90 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~--~~~~~~~ia~~lgl~~~~ 90 (339)
++|+|||+++|||+++. +.++.+|+.+|+++||+|+|+++++||.+++|+..+... .+.++..++..+|++ ..
T Consensus 2 ~~v~IvG~~~tp~~~~~----~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~ 76 (389)
T PRK06064 2 RDVAIIGVGQTKFGELW----DVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PI 76 (389)
T ss_pred CcEEEEEcccccceecC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CC
Confidence 68999999999999864 479999999999999999999999999999987755432 355778899999997 58
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccccc---CCCc
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY---NDFG 167 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 167 (339)
|.++++++|+|+..+|..|+.+|++|++++|||+|.|+++..+......... ..+ .+ .+..|+ ....
T Consensus 77 ~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~-~~~-----~~----~~~~~~g~~~~~~ 146 (389)
T PRK06064 77 PATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIA-RAG-----DY----EWEEFFGATFPGL 146 (389)
T ss_pred CeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhh-ccc-----cc----ccccccCCchHHH
Confidence 9999999999999999999999999999999999999988755311110000 000 00 111111 1236
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
|++.+++|+++||+++|+++++++++|+||.+||+ +++++ ++|.|+|+++||++
T Consensus 147 ~al~a~~~~~~yG~s~e~~a~~a~~~~~~A~~np~-a~~~~-------------------------~~t~~~~~~s~~i~ 200 (389)
T PRK06064 147 YALIARRYMHKYGTTEEDLALVAVKNHYNGSKNPY-AQFQK-------------------------EITVEQVLNSPPVA 200 (389)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhCcH-hhhCC-------------------------CCCHHHHhcCCccc
Confidence 88999999999999999999999999999999997 56553 27999999999999
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCC-----cc--ccchHHHHHHHHHHcCCCCC
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WF--TTAPSLAIPKAIANAGLEAS 320 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~--~~~~~~a~~~al~~agl~~~ 320 (339)
+ |+|++||++++|||+|+||++++.|++++.++ ++|.|++...+.+. ++ ..+...+++++|+++|++++
T Consensus 201 ~---Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~ 276 (389)
T PRK06064 201 D---PLKLLDCSPITDGAAAVILASEEKAKEYTDTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPK 276 (389)
T ss_pred C---CCchhhcCCCCCcceEEEEecHHHHHHhcCCC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHH
Confidence 5 79999999999999999999999999997666 79999998865321 11 22346899999999999999
Q ss_pred CCcEEEeecccccccccCC
Q 019555 321 QIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 321 DId~~~~hd~F~~~~l~~~ 339 (339)
|||++|+||+|++++++++
T Consensus 277 did~~e~~d~ft~~~~~~~ 295 (389)
T PRK06064 277 DIDVAEVHDCFTIAEILAY 295 (389)
T ss_pred HCCEEEecCCCcHHHHHHH
Confidence 9999999999999988753
No 48
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=100.00 E-value=5.1e-45 Score=347.74 Aligned_cols=281 Identities=25% Similarity=0.288 Sum_probs=232.3
Q ss_pred EeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecc
Q 019555 18 VGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK 97 (339)
Q Consensus 18 vG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~ 97 (339)
||+++|||+|+. +.++.+|+.+|+++||+|+|+++++||.+++++..+....+.+++.++..+|++ ..+.++++.
T Consensus 1 vG~g~t~~~~~~----~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~ 75 (375)
T cd00829 1 VGVGMTPFGRRS----DRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVEA 75 (375)
T ss_pred CeeeecCcccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEeC
Confidence 699999999975 489999999999999999999999999999998766544467889999999997 689999999
Q ss_pred cCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHHHHHHH
Q 019555 98 VCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICAN 177 (339)
Q Consensus 98 ~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 177 (339)
+|+|+..+|..|+++|++|.+++||++|+|.++..+.... ... .... ..+... ..+........|++.+++||+
T Consensus 76 ~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~--~~~-~~~~-~~~~~~--~~~~~~~~~~~~al~a~~~~~ 149 (375)
T cd00829 76 AGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDE--AGG-RASD-LEWEGP--EPPGGLTPPALYALAARRYMH 149 (375)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccch--hhc-cccc-hhhhhc--ccccCCChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987653110 000 0000 000000 000000012568999999999
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCCCCcccccc
Q 019555 178 KHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGN 257 (339)
Q Consensus 178 ~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~g~l~~~~ 257 (339)
+||+++|+++.|++++|+||.+||+ ++|++ ++|.|+++++||++ +|+|++|
T Consensus 150 ~~g~t~e~~~~va~~~~~~A~~np~-A~~~~-------------------------~~t~d~~~~~~~i~---~pl~~~~ 200 (375)
T cd00829 150 RYGTTREDLAKVAVKNHRNAARNPY-AQFRK-------------------------PITVEDVLNSRMIA---DPLRLLD 200 (375)
T ss_pred HhCCCHHHHHHHHHHHHHHHhcCCh-hhcCC-------------------------CCCHHHHhcCCccc---CCCchhh
Confidence 9999999999999999999999997 46653 37899999999999 4799999
Q ss_pred CCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCc-------cccchHHHHHHHHHHcCCCCCCCcEEEeecc
Q 019555 258 ASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-------FTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (339)
Q Consensus 258 ~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-------~~~~~~~a~~~al~~agl~~~DId~~~~hd~ 330 (339)
||+++|||+|+||++++.++++ .+++++|.|++...+.+.. ...+++.+++++|+++|++++|||++|+|||
T Consensus 201 ~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~ 279 (375)
T cd00829 201 CCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDC 279 (375)
T ss_pred cCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCc
Confidence 9999999999999999999998 5566999999998764322 3456688999999999999999999999999
Q ss_pred cccccccCC
Q 019555 331 FSVRNHVPT 339 (339)
Q Consensus 331 F~~~~l~~~ 339 (339)
|++++++++
T Consensus 280 F~~~~l~~~ 288 (375)
T cd00829 280 FTIAELLAL 288 (375)
T ss_pred ChHHHHHHH
Confidence 999998764
No 49
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=100.00 E-value=1.1e-44 Score=348.46 Aligned_cols=301 Identities=20% Similarity=0.227 Sum_probs=230.0
Q ss_pred CCCceEEEeeccCcc-ccc-----------CCCCCCCCHHHHHHHHHHHHHHHcCCCCCc--cCeEEEEeecCCC--CCC
Q 019555 11 KARDVCIVGVARTPM-GGF-----------LGSLSSVSATKLGSIAIECALKRANVKPLL--VQEVFFGNVLSAN--LGQ 74 (339)
Q Consensus 11 ~~~~v~IvG~~~t~~-~~~-----------~~~~~~~~~~~L~~~A~~~Al~dagl~~~~--Id~i~~g~~~~~~--~~~ 74 (339)
.|++|+|||+++||| +|. .+.+.+.++.+|+.+|+++||+|+|+++++ ||.+++|+..+.. .++
T Consensus 10 ~~~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~ 89 (438)
T PTZ00455 10 AAKRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQG 89 (438)
T ss_pred hcCceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEecccccccccc
Confidence 357899999999999 882 566678999999999999999999999999 9999999886544 346
Q ss_pred cHHHHHHHHcCCC------CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhcc--CCCC
Q 019555 75 APARQAALGAGIP------NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKG--SRLG 146 (339)
Q Consensus 75 ~~~~~ia~~lgl~------~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~--~~~~ 146 (339)
++++.+++.+|++ ..+|.++++++|+|++.||..|+++|++|.+|+|||+|+|+++..+......... ..++
T Consensus 90 ~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~ 169 (438)
T PTZ00455 90 HLGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYR 169 (438)
T ss_pred chHHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhcc
Confidence 7788888776654 3689999999999999999999999999999999999999999866421100000 0000
Q ss_pred CccccccccccccccccCCCcHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceE
Q 019555 147 HDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT-ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFII 225 (339)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g-~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~ 225 (339)
.. ..+.+......++..+ +||++|| +|+|+++.|++++|.|+..||. ++++.+ |++++
T Consensus 170 ~~--------~~~~~~~~~~~~a~~~-~ym~~~ggitrE~la~vAvka~~~a~~nP~-A~~~~~--~~t~~--------- 228 (438)
T PTZ00455 170 RQ--------RKLDDFTFPCLFAKRM-KYIQEHGHFTMEDTARVAAKAYANGNKNPL-AHMHTR--KLSLE--------- 228 (438)
T ss_pred cc--------ccccCcchHHHHHHHH-HHHHHHCCCCHHHHHHHHHHHHHHHhcCCH-hhccCC--CCCce---------
Confidence 00 0000000011244443 8999997 9999999999999999999996 454321 22111
Q ss_pred eecCCCCcccCHHHHhcCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCc----cEEEEeeEEeee----CC
Q 019555 226 VDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQV----IAKIRGFADAAQ----AP 297 (339)
Q Consensus 226 ~~~~~~~r~~~~~~~~~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~----~~~i~g~~~~~~----~~ 297 (339)
...|+..| ..++++++++.. |++++|||+++|||+|+||+|++.+++++.+| .++|.|++.... ++
T Consensus 229 ~~~d~~~~---~~e~l~s~~i~~---pl~~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~ 302 (438)
T PTZ00455 229 FCTGASDK---NPKFLGNETYKP---FLRMTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDP 302 (438)
T ss_pred eecccccc---chhhhcCCcccC---cCchhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCc
Confidence 11122323 335777888874 79999999999999999999999999998776 699999999865 33
Q ss_pred C---ccccchHHHHHHHHHHcCCCCCCCcEEEeecccccccccCC
Q 019555 298 E---WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 298 ~---~~~~~~~~a~~~al~~agl~~~DId~~~~hd~F~~~~l~~~ 339 (339)
. .+.. .+.+++++|+++|++++|||++|+||||++++++++
T Consensus 303 ~~~~~~~~-~~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~~l~~~ 346 (438)
T PTZ00455 303 PDATRMFT-SRAAAQKALSMAGVKPSDLQVAEVHDCFTIAELLMY 346 (438)
T ss_pred cccccchH-HHHHHHHHHHHcCCCHHHCcEeeecccChHHHHHHH
Confidence 2 2222 268999999999999999999999999999998763
No 50
>PRK07855 lipid-transfer protein; Provisional
Probab=100.00 E-value=1.6e-44 Score=343.55 Aligned_cols=284 Identities=19% Similarity=0.120 Sum_probs=219.3
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~ 91 (339)
..+|+|||+++|+|+|+. ++++.+|+.+|+++||+||||++++||.+++++. . ... ...++..+|+.+..+
T Consensus 3 ~~~v~IvG~g~t~~~r~~----~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~~~---~~~l~~~lGl~~~~~ 73 (386)
T PRK07855 3 SGKAAIVGIGATEFSKNS----GRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-TNP---EIAVARALGIGELKF 73 (386)
T ss_pred CCCEEEEEeeecccccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-ccc---HHHHHHHCCCCCCcc
Confidence 468999999999999974 3789999999999999999999999999986432 1 111 245888999963246
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCceEEEEccc--cccCCcchhhhhhccCCCCCccccccccccccccccC----C
Q 019555 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME--SMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN----D 165 (339)
Q Consensus 92 ~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e--~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 165 (339)
...+..+|+++..+|..|+..|++|.+|+|||+|.. .... ..... . ..+...... ......+..|+. .
T Consensus 74 ~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~-~~~~~---~-~~~~~~~~~-~~~~~~~~~~~g~~~~~ 147 (386)
T PRK07855 74 FSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGM-RFGQG---Q-TGLAENPTS-TGVDYGWSYPHGLLTPA 147 (386)
T ss_pred eeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeeccccccc-ccccc---c-ccccccccc-cccchhhhhhcCCCChH
Confidence 678999999999999999999999999999999983 2211 00000 0 000000000 000001112222 1
Q ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCC
Q 019555 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (339)
Q Consensus 166 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 245 (339)
..+++.+++||++||+|+|++++|++++|+||.+||+ +++++ +++|.|+|+++|+
T Consensus 148 ~~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~-A~~~~------------------------~~~t~e~vl~s~~ 202 (386)
T PRK07855 148 AWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPK-AWFYG------------------------RPITLEDHQNSRW 202 (386)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChH-hhhcC------------------------CCCCHHHHhcCCc
Confidence 3589999999999999999999999999999999996 56531 2389999999999
Q ss_pred CCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC---------Ccccc--chHHHHHHHHHH
Q 019555 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP---------EWFTT--APSLAIPKAIAN 314 (339)
Q Consensus 246 ~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~---------~~~~~--~~~~a~~~al~~ 314 (339)
|++ |+|++|||+++|||+|+||+|++.|++++.+| ++|.|++...+.. .++.. +...+++++|++
T Consensus 203 Ia~---Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~ 278 (386)
T PRK07855 203 IAE---PLRLLDCCQESDGAVALVVTSAERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQ 278 (386)
T ss_pred ccC---CchhhhcCCcCCceEEEEEecHHHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHH
Confidence 984 89999999999999999999999999998887 7999998865311 11111 124799999999
Q ss_pred cCCCCCCCcEEEeecccccccccCC
Q 019555 315 AGLEASQIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 315 agl~~~DId~~~~hd~F~~~~l~~~ 339 (339)
+|++++|||++|+|||||+++++++
T Consensus 279 AGi~~~DiDv~El~D~Ft~~~l~~~ 303 (386)
T PRK07855 279 SGLGPADIDTAILYDHFTPFVLMQL 303 (386)
T ss_pred cCCCHHHCcEEEeccCCcHHHHHHH
Confidence 9999999999999999999998864
No 51
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.3e-44 Score=345.68 Aligned_cols=283 Identities=21% Similarity=0.207 Sum_probs=221.6
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC--CcHHHHHHHHcCCCCC
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG--QAPARQAALGAGIPNS 89 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~--~~~~~~ia~~lgl~~~ 89 (339)
|++|+|||+++|||+|+. +.++.+|+.+|+++||+|+|+++++||.+++|+..+.... ...+..+...+|+. .
T Consensus 1 ~~~v~Ivg~g~tpfgr~~----~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~ 75 (389)
T PRK07516 1 MMTASIVGWAHTPFGKLD----AETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-F 75 (389)
T ss_pred CCcEEEEeCCcceeeecC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-C
Confidence 468999999999999964 4889999999999999999999999999999977543221 11222334556776 5
Q ss_pred cceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhh-hccCCCCCccccccccccccccccC-CCc
Q 019555 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEA-RKGSRLGHDTIVDGMLKDGLWDVYN-DFG 167 (339)
Q Consensus 90 ~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 167 (339)
.|.++++++|+|+..+|..|+++|++|++|+|||+|+|+++..+...... ..+..+.. . .+..|.. ...
T Consensus 76 ~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~ 146 (389)
T PRK07516 76 KPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLK-----E----EGDTPGGFAGV 146 (389)
T ss_pred CceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccc-----c----ccccCCCcHHH
Confidence 79999999999999999999999999999999999999998765422111 11111100 0 0001111 135
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHH----HHhcC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA----KLMKL 243 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~----~~~~~ 243 (339)
|++.+++||++||+++|++++|++++|+||..||. +++++ | +|.| +++++
T Consensus 147 ~a~~a~~y~~~yg~~~e~~a~vav~~~~~A~~nP~-A~~~~---~----------------------~t~~~~~~~~~~~ 200 (389)
T PRK07516 147 FGRIAQAYFQRYGDQSDALAMIAAKNHANGVANPY-AQMRK---D----------------------LGFEFCRTVSEKN 200 (389)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcCCh-hhcCC---c----------------------ccHHhhhhhhhcC
Confidence 99999999999999999999999999999999997 45543 1 3443 36777
Q ss_pred CCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----Cc-cccchHHHHHHHHHHcCC
Q 019555 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EW-FTTAPSLAIPKAIANAGL 317 (339)
Q Consensus 244 ~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~-~~~~~~~a~~~al~~agl 317 (339)
+++. +|+|++|||+++|||+|+||++++.+++++ ++ ++|.|++...+.. .. ...++..+++++|+++||
T Consensus 201 ~~i~---~pl~~~d~~~~~DGAaa~il~s~~~a~~~~-~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl 275 (389)
T PRK07516 201 PLVA---GPLRRTDCSLVSDGAAALVLADAETARALQ-RA-VRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGV 275 (389)
T ss_pred Cccc---CCCchhhcCCcCcceEEEEEecHHHHHhcC-CC-EEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCC
Confidence 8887 489999999999999999999999999983 44 8999999875411 11 124457899999999999
Q ss_pred CCCCCcEEEeecccccccccCC
Q 019555 318 EASQIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 318 ~~~DId~~~~hd~F~~~~l~~~ 339 (339)
+++|||++|+||||++++++++
T Consensus 276 ~~~did~~e~~d~f~~~~~~~~ 297 (389)
T PRK07516 276 TLDDLSFVETHDCFTIAELIEY 297 (389)
T ss_pred CHHHCCEEEEecCCCHHHHHHH
Confidence 9999999999999999988763
No 52
>PRK06059 lipid-transfer protein; Provisional
Probab=100.00 E-value=1.5e-44 Score=346.46 Aligned_cols=286 Identities=17% Similarity=0.174 Sum_probs=226.1
Q ss_pred CCCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCC
Q 019555 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS 89 (339)
Q Consensus 11 ~~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~ 89 (339)
|+++|+|||+++|||+|+. .++.+|+.+|+++||+|+|+++++||.+++++...... .+..+..++..+|+. .
T Consensus 2 ~~~~v~Ivg~~~t~~~r~~-----~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~ 75 (399)
T PRK06059 2 MPEPVYILGAGMHPWGKWG-----RDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-G 75 (399)
T ss_pred CCCcEEEEEecccccCCCC-----CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-C
Confidence 4478999999999999852 57899999999999999999999999999887665432 334567899999996 4
Q ss_pred cceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHH
Q 019555 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (339)
Q Consensus 90 ~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (339)
.+.++++.+|+|+..+|.+|+++|++|++++|||+|+|.++...+ .. ..+..... ..+......++.. ...|+
T Consensus 76 ~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~-~~--~~~~~~~~-~~~~~~~~~g~~~---~~~~a 148 (399)
T PRK06059 76 APVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFF-AP--VGGERPDD-PDWLRFHLIGATN---PVYFA 148 (399)
T ss_pred CceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCC-cc--cccccccc-cchhhcccCCCcc---HHHHH
Confidence 789999999999999999999999999999999999999885211 00 00000000 0000000011211 24689
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCC
Q 019555 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE 249 (339)
Q Consensus 170 ~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 249 (339)
+.+++||++||+++|+++.+++++|+|+..||+ +++++ ++|.|+|+++||+++
T Consensus 149 l~a~~~~~~yg~s~e~~a~v~~~~~~~a~~Np~-A~~r~-------------------------~~t~e~v~~s~~i~~- 201 (399)
T PRK06059 149 LLARRRMDLYGATVEDFAQVKVKNARHGLLNPN-ARYRK-------------------------EVTVEDVLASPVVSD- 201 (399)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHccCcH-hhcCC-------------------------CCCHHHHhcCCcccC-
Confidence 999999999999999999999999999999886 34442 289999999999995
Q ss_pred CCccccccCCcccccceeEEEeCHHHHHhc--CCCccEEEEeeEEeeeC-C------Cccc-----cch-------HHHH
Q 019555 250 GGSVTAGNASIISDGAAALVLVSGVKALEL--GLQVIAKIRGFADAAQA-P------EWFT-----TAP-------SLAI 308 (339)
Q Consensus 250 ~g~l~~~~~~~~~DGAaAviL~s~~~a~~~--~~~~~~~i~g~~~~~~~-~------~~~~-----~~~-------~~a~ 308 (339)
|++++|||+++|||+|+||++++.|+++ +.++.+||.|++..... + ..+. ..+ ..++
T Consensus 202 --Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~ 279 (399)
T PRK06059 202 --PLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQIL 279 (399)
T ss_pred --CCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHH
Confidence 7999999999999999999999999999 55555999999987521 1 1111 011 3679
Q ss_pred HHHHHHcCCCCCCCcEEEeecccccccccC
Q 019555 309 PKAIANAGLEASQIDYYEINEAFSVRNHVP 338 (339)
Q Consensus 309 ~~al~~agl~~~DId~~~~hd~F~~~~l~~ 338 (339)
+++|+++|++++|||++|+||||+++++++
T Consensus 280 ~~a~~~agl~~~Did~~El~d~f~~~~l~~ 309 (399)
T PRK06059 280 DAAYAEAGIGPEDLSLAEVYDLSTALELDW 309 (399)
T ss_pred HHHHHHcCCCHHHCcEEeecccChHHHHHH
Confidence 999999999999999999999999999876
No 53
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=100.00 E-value=8.2e-44 Score=312.37 Aligned_cols=314 Identities=36% Similarity=0.559 Sum_probs=274.4
Q ss_pred CCceEEEeeccCcccc-cCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc
Q 019555 12 ARDVCIVGVARTPMGG-FLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~-~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~ 90 (339)
..+|+||+..||+++| ..+.+++..+.+|...+.+..+++.+++|+.|..|++|+++....+..-.+..+.+.|++..+
T Consensus 35 ~~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tv 114 (435)
T KOG1389|consen 35 AEDVVIVAALRTAICKAKRGGFKDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETV 114 (435)
T ss_pred ccCEEEEeeccchhhhcccCCcccCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCccc
Confidence 3689999999999988 457899999999999999999999999999999999999998766644556667888999999
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCC-cchhhhhhccCCCCCccccccccccccccccCCCcHH
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA-PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (339)
|..++++.|+|+++|+..-+..|++|.||+-|..|+|+|++. |..+.. .++-...-.....+++ .+||
T Consensus 115 pv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g-----~~~~~~~~~~~A~dCl------lpmG 183 (435)
T KOG1389|consen 115 PVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPG-----SINPRLQKFEKARDCL------LPMG 183 (435)
T ss_pred chhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCcc-----ccChhhhhhhHHhhcc------cccc
Confidence 999999999999999999999999999999999999999984 222211 1111111112223445 7899
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceee--eecCCCC-CcceEeecCCCCcc-cCHHHHhcCCC
Q 019555 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPV--EMSSGRG-KPFIIVDKDEGLEK-FDAAKLMKLRP 245 (339)
Q Consensus 170 ~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~--~~~~~~~-~~~~~~~~~~~~r~-~~~~~~~~~~~ 245 (339)
...+...++||++|++++.+++.+|++|..+-+.+.|.+||.|+ .+.+-++ +.-.+...|+++|| ++++.+.+++|
T Consensus 184 itsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkp 263 (435)
T KOG1389|consen 184 ITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKP 263 (435)
T ss_pred cchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcch
Confidence 99999999999999999999999999999999999999999999 4433223 33356778999999 99999999999
Q ss_pred CCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEE
Q 019555 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYY 325 (339)
Q Consensus 246 ~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~ 325 (339)
+|+++|..|..|.++++|||+||+|.....|.+++++.++.+..+...+.+|..|+.+|+.++..+++.+||..+|||+|
T Consensus 264 vFkkdGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~F 343 (435)
T KOG1389|consen 264 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDLF 343 (435)
T ss_pred hhhcCCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeecCCHHHcCCCchhhhHHHHHHcCCccccccee
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred Eeecccccccc
Q 019555 326 EINEAFSVRNH 336 (339)
Q Consensus 326 ~~hd~F~~~~l 336 (339)
|++++|++|.+
T Consensus 344 EINEAFAsQ~~ 354 (435)
T KOG1389|consen 344 EINEAFASQAL 354 (435)
T ss_pred ehhHHHHHHHH
Confidence 99999999875
No 54
>PRK07937 lipid-transfer protein; Provisional
Probab=100.00 E-value=5.1e-43 Score=328.38 Aligned_cols=274 Identities=19% Similarity=0.124 Sum_probs=211.4
Q ss_pred CceEEEeeccCcccccCCCCCCCCH-HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCc-HHHHHHHHcCCCCCc
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSA-TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQA-PARQAALGAGIPNSV 90 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~-~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~-~~~~ia~~lgl~~~~ 90 (339)
++|+|||+++|||+|+.. +.+. .+|+.+|+++||+|+|++++|||.++.+.. ....++. ....+...+|+.+..
T Consensus 2 ~~vaIvG~g~t~~~~~~~---~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~ 77 (352)
T PRK07937 2 RDVAVVGFAQAPHVRRTD---GTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPI 77 (352)
T ss_pred CcEEEEEeeccccccCCC---CCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCC
Confidence 789999999999999742 2555 899999999999999999999998864322 2222222 222344667874344
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccccc---CCCc
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY---NDFG 167 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 167 (339)
+...+. +++..+|.+|+.+|++|.+|+|||+|+|+++...... . ... ..++ .+..|+ ....
T Consensus 78 ~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~---~----~~~--~~~~----~~~~p~G~~~~~~ 141 (352)
T PRK07937 78 NESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRR---V----LAL--QLDP----YTVAPLWPDSVSM 141 (352)
T ss_pred ceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhh---h----hhc--cCCc----ceeccCCCchHHH
Confidence 566664 4688899999999999999999999999875311100 0 000 0011 111122 2346
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
+++.+++||++||+++|+++++++++|+||..||+ ++ .| +|.|+|+++|+|+
T Consensus 142 ~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~-A~--------------------------~r-it~edvl~s~~ia 193 (352)
T PRK07937 142 AGLQARAGLDAGKWTEEQMAEVAARSRADARRNPS-AE--------------------------PS-ISVDELLARPYFA 193 (352)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCch-hh--------------------------cc-CCHHHHhcCCccc
Confidence 89999999999999999999999999999999996 33 24 7999999999998
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccc---cchHHHHHHHHHHc-CCCCCCCc
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT---TAPSLAIPKAIANA-GLEASQID 323 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~---~~~~~a~~~al~~a-gl~~~DId 323 (339)
+ |+|++|||+++|||+|+||+|++.|++++.+| ++|.|++...+.. .+. ..+..+++.+++++ |++++|||
T Consensus 194 ~---PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~~-~~~~~d~~~~~~~~~a~~~aAgi~~~diD 268 (352)
T PRK07937 194 D---PLRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIESP-SLGARDLTRSPSTALAAEAATGGDAGGVD 268 (352)
T ss_pred C---CchhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCCc-cccccccccHHHHHHHHHHhcCCCHHHCC
Confidence 5 89999999999999999999999999999888 9999999975432 221 33456677788885 99999999
Q ss_pred EEEeecccccccccCC
Q 019555 324 YYEINEAFSVRNHVPT 339 (339)
Q Consensus 324 ~~~~hd~F~~~~l~~~ 339 (339)
++|+||||++++++++
T Consensus 269 ~~Ei~D~F~~~~l~~~ 284 (352)
T PRK07937 269 VAELHAPFTHQELILR 284 (352)
T ss_pred EEEEeCCChHHHHHHH
Confidence 9999999999998763
No 55
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=100.00 E-value=2.6e-41 Score=322.48 Aligned_cols=286 Identities=29% Similarity=0.367 Sum_probs=223.4
Q ss_pred EeeccCcccccC---CCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHH-HHHHcCCCCCccee
Q 019555 18 VGVARTPMGGFL---GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQ-AALGAGIPNSVVCT 93 (339)
Q Consensus 18 vG~~~t~~~~~~---~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~-ia~~lgl~~~~~~~ 93 (339)
+|+++|||+|+. +.+....+.+|+.+|+++||+++++++++||.+++|+..+.+.++.+++. +...+|+. ++|.+
T Consensus 1 ~g~~~Tpfg~~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~ 79 (393)
T cd00826 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAI 79 (393)
T ss_pred CccccCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEE
Confidence 589999999976 66677899999999999999999999999999999988876655666664 55667776 68999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccc-cccc-cccCCCcHHHH
Q 019555 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLK-DGLW-DVYNDFGMGVC 171 (339)
Q Consensus 94 ~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~ 171 (339)
+++++|+|++.+|..|+.+|++|.++++||+|+|+++..+.... . .. ..+.+.. .+-. .+.....+++.
T Consensus 80 ~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~--~---~~----~~~~~~~~~~~r~~~~~~a~~s~~ 150 (393)
T cd00826 80 GMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNA--K---EK----HIDVLINKYGMRACPDAFALAGQA 150 (393)
T ss_pred EecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCccccc--c---cc----hhHHHHHHhCChhhccHHHHHHHH
Confidence 99999999999999999999999999999999999987542100 0 00 0000000 0000 01111456777
Q ss_pred HHHHHHHcCCCHHHHHHHHHHH---HHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCC
Q 019555 172 AEICANKHTITRDEQDSYAIRS---FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (339)
Q Consensus 172 a~~~~~~~g~~~~~~~~~~~~~---~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 248 (339)
+++||++||+++|++..+++++ |.|+..||+ ++++ +++|.|+|++++|+++
T Consensus 151 ~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~-a~~~-------------------------~~~t~e~~~~~~~i~~ 204 (393)
T cd00826 151 GAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEY-IQFG-------------------------DEASLDEIAKLRPAFD 204 (393)
T ss_pred HHHHHHHcCCCHHHEEEEEEecCCCCEEEecCCC-CCCC-------------------------CCCCHHHHhcCCCccC
Confidence 8889999999999888888877 566776664 3332 2389999999999996
Q ss_pred CCCccccccCCcccccceeEEEeCHHHHHhcCC-CccEEEEeeEEeee------CCC----ccccchHHHHHHHHHHcCC
Q 019555 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGL-QVIAKIRGFADAAQ------APE----WFTTAPSLAIPKAIANAGL 317 (339)
Q Consensus 249 ~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~-~~~~~i~g~~~~~~------~~~----~~~~~~~~a~~~al~~agl 317 (339)
+++|+|++|||+++|||+|+||+|++.+++++. .+.++|.+.+...+ ++. .+..+++.+++++|+++||
T Consensus 205 ~~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi 284 (393)
T cd00826 205 KEDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGL 284 (393)
T ss_pred CCCCEechhcCCcCCCeEEEEEecHHHHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCC
Confidence 668999999999999999999999999999875 22266766655433 222 2345678999999999999
Q ss_pred CCCCCcEEEeecccccccccCC
Q 019555 318 EASQIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 318 ~~~DId~~~~hd~F~~~~l~~~ 339 (339)
+++|||++|+||||++++++++
T Consensus 285 ~~~DID~~Ei~d~Fa~~~l~~~ 306 (393)
T cd00826 285 GIGDLDLIEAHDAFAANACATN 306 (393)
T ss_pred CHHHcCeeehhhhhHHHHHHHH
Confidence 9999999999999999998763
No 56
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=100.00 E-value=2.1e-40 Score=323.73 Aligned_cols=296 Identities=19% Similarity=0.084 Sum_probs=223.7
Q ss_pred CCCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCC--CCccCeEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 019555 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVK--PLLVQEVFFGNVLSANLGQAPARQAALGAGIPN 88 (339)
Q Consensus 11 ~~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~--~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~ 88 (339)
..+.++|||+|+|+|++.... ...++.+|+.+|+++||+|+|++ +++||.+++++.... ...+.+..++.+||+.+
T Consensus 2 ~~~~~~IVGvG~t~~~~~~~~-~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~-~~~~~~~~la~~lGl~p 79 (498)
T PRK08257 2 DPRTPVIVGVGQVTERPDDPA-YGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSW-RYRDPPGLLAERLGADP 79 (498)
T ss_pred CCCcEEEEEeeecccccCCcc-cCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccc-cccCHHHHHHHHcCCCC
Confidence 357899999999999885321 11489999999999999999999 999999998766432 23456688999999975
Q ss_pred CcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhh---hhccCCCCCc-----cccccccccccc
Q 019555 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE---ARKGSRLGHD-----TIVDGMLKDGLW 160 (339)
Q Consensus 89 ~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~~ 160 (339)
.+......+|+++..+|..|+.+|++|++|+|||+|+|++++.+..... ..+....... ...... ...+.
T Consensus 80 -~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e 157 (498)
T PRK08257 80 -ARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPM-ASPAE 157 (498)
T ss_pred -cceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccc-cchhh
Confidence 4666677888899999999999999999999999999998764321100 0000000000 000000 00111
Q ss_pred cccC----CCcHHHHHHHHHHHcCCCHHH----HHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCC
Q 019555 161 DVYN----DFGMGVCAEICANKHTITRDE----QDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL 232 (339)
Q Consensus 161 ~~~~----~~~~~~~a~~~~~~~g~~~~~----~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 232 (339)
.++. ...+++.+++||++||.++|+ ++.+..++|++|.+||+ +++++
T Consensus 158 ~~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~-A~~r~------------------------ 212 (498)
T PRK08257 158 LRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPH-AWIPR------------------------ 212 (498)
T ss_pred hhcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHH-HhhCC------------------------
Confidence 1211 246899999999999999998 34555589999999996 56653
Q ss_pred cccCHHHHh----cCCCCCCCCCccccccCCc-ccccceeEEEeCHHHHHhcCC--CccEEEEeeEEeeeC-----CCcc
Q 019555 233 EKFDAAKLM----KLRPSFKEGGSVTAGNASI-ISDGAAALVLVSGVKALELGL--QVIAKIRGFADAAQA-----PEWF 300 (339)
Q Consensus 233 r~~~~~~~~----~~~~~~~~~g~l~~~~~~~-~~DGAaAviL~s~~~a~~~~~--~~~~~i~g~~~~~~~-----~~~~ 300 (339)
++|.|+|+ ++|+|.+ |+++++||+ .+|||+|+||+|++.|++++. .++++|.|++...+. +.++
T Consensus 213 -~~t~eevl~~~~~~rmIa~---Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~ 288 (498)
T PRK08257 213 -ERSAEEIVTPTPDNRMIAW---PYTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDL 288 (498)
T ss_pred -CCCHHHHhcccCCCCeeeC---CccHhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCcccccccccc
Confidence 27899999 7899984 799999996 899999999999999999984 335899999988652 1223
Q ss_pred ccch--HHHHHHHHHHcCCCCCCCcEEEeecccccccccCC
Q 019555 301 TTAP--SLAIPKAIANAGLEASQIDYYEINEAFSVRNHVPT 339 (339)
Q Consensus 301 ~~~~--~~a~~~al~~agl~~~DId~~~~hd~F~~~~l~~~ 339 (339)
...+ ..+++++|+++|++++|||++|+|||||+.+++|+
T Consensus 289 ~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~~~~~~ 329 (498)
T PRK08257 289 HRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSAVQVAA 329 (498)
T ss_pred ccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHHHHHHH
Confidence 3333 46999999999999999999999999999998763
No 57
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=100.00 E-value=5.4e-40 Score=312.67 Aligned_cols=313 Identities=43% Similarity=0.587 Sum_probs=266.0
Q ss_pred CCceEEEeeccCcccccC-CCCCCCCHHHHHHHHHHHHHHHc--CCCCCccCeEEEEeecCCC-CCCcHHHHHHHHcCCC
Q 019555 12 ARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRA--NVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIP 87 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~-~~~~~~~~~~L~~~A~~~Al~da--gl~~~~Id~i~~g~~~~~~-~~~~~~~~ia~~lgl~ 87 (339)
+++|+|+|.++|||++++ +.+.+..+.+|.....+..+++. ++++.+||.+++|++.+.. .++++++.+++.+|++
T Consensus 1 ~~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~ 80 (392)
T COG0183 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLP 80 (392)
T ss_pred CceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCC
Confidence 578999999999999997 66777777777777777776543 5777789999999888874 4779999999999998
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCc
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
.++|.++++.+|+|++.|+..|++.|++|.+|+||++|+|+||+.|.. +++..+... ..+++..+.+.+++....
T Consensus 81 ~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~----~~~~~~~~~-~~d~~~~~~~~~~~~~~~ 155 (392)
T COG0183 81 GSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMG----REGVRVLDS-AVDPMFEDPLGDATPGYL 155 (392)
T ss_pred CCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCcc----ccchhhhhh-hhhhccccccccccchhH
Confidence 669999999999999999999999999999999999999999998763 112221111 233344445555655678
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc---cCHHHHhcCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK---FDAAKLMKLR 244 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~---~~~~~~~~~~ 244 (339)
|++.|++||++||+|||++++|++++|+||.+||+++.| ++|.|+++... .+..|+..|+ .+.|.+..++
T Consensus 156 ~g~~A~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~-~eI~~~~v~~~------~~~~dp~~r~d~~~~~dg~a~l~ 228 (392)
T COG0183 156 MGLTAERYAKRYGISREDQDEVAVKSHKNAAANPKAGFF-DEITPEDVLNS------PVVADPLRRLDCSPTSDGAAALV 228 (392)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCC-CceeeEEecCC------ceecCCcccCCCCCChhhhcCce
Confidence 999999999999999999999999999999999987777 88989877543 2566777776 7899999999
Q ss_pred CCCCCC-CccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCC-CCCC
Q 019555 245 PSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLE-ASQI 322 (339)
Q Consensus 245 ~~~~~~-g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~-~~DI 322 (339)
|.|++. +.++..|.+...||++++++.+.+.+.+++..+++++.++..++.+|..+ ..+..+++++|+++++. .+||
T Consensus 229 ~a~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~-~~~v~av~~~~~~~~l~~~edl 307 (392)
T COG0183 229 PAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDL 307 (392)
T ss_pred eccccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccc-cCCHHHHHHHHHHcCCchhhhc
Confidence 999765 68999999999999999999999999999999999999999998877776 78899999999999999 9999
Q ss_pred cEEEeeccccccccc
Q 019555 323 DYYEINEAFSVRNHV 337 (339)
Q Consensus 323 d~~~~hd~F~~~~l~ 337 (339)
|++|.+++|..+.+.
T Consensus 308 gl~e~nEafa~~~~~ 322 (392)
T COG0183 308 GLAEKGEAFAAVALG 322 (392)
T ss_pred CceecChHHHHHHHh
Confidence 999999999987754
No 58
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=100.00 E-value=5.2e-40 Score=283.02 Aligned_cols=289 Identities=24% Similarity=0.286 Sum_probs=235.9
Q ss_pred ceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCccee
Q 019555 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT 93 (339)
Q Consensus 14 ~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~ 93 (339)
+|||||+|.|.|.|. +...+....|++.+|+..||+|+++..++|+..++|...++.. ...+.--.+|++ +.|.+
T Consensus 7 rvyvvgvgmtkf~kp-g~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdst---cgqraiyevgmt-gipi~ 81 (408)
T KOG1406|consen 7 RVYVVGVGMTKFEKP-GRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDST---CGQRAIYEVGMT-GIPIY 81 (408)
T ss_pred eEEEEecceeeecCC-CcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCc---cchHHHHhcccc-Cccee
Confidence 899999999999997 4567889999999999999999999999999999999887654 122233467998 78999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhh-hhccCCCCCcccccccccccc-ccccCCCcHHHH
Q 019555 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE-ARKGSRLGHDTIVDGMLKDGL-WDVYNDFGMGVC 171 (339)
Q Consensus 94 ~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 171 (339)
.+++.|+++.++|.+|.+.|++|..|+||+.|+|+|+...+.... +|......+...+... .++ ..|.....||-.
T Consensus 82 nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~--ygl~a~pmaaqmfgna 159 (408)
T KOG1406|consen 82 NVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSET--YGLEAAPMAAQMFGNA 159 (408)
T ss_pred eccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhh--ccCCCCcchHHHhhhh
Confidence 999999999999999999999999999999999999986544432 1211111111011000 122 234455778889
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCCCC
Q 019555 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGG 251 (339)
Q Consensus 172 a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~g 251 (339)
.+.+|++||..+|.++.+++++|++...||. .+|++| +++|++++++-+++
T Consensus 160 gkehmekygtk~ehfakiawknhkhsvnnpy-sqf~de-------------------------ysldqvm~s~~v~d--- 210 (408)
T KOG1406|consen 160 GKEHMEKYGTKPEHFAKIAWKNHKHSVNNPY-SQFRDE-------------------------YSLDQVMKSPQVVD--- 210 (408)
T ss_pred HHHHHHHhCCCHHHHhHhhhhccccccCChh-Hhhhhh-------------------------ccHHHHhcchHHHH---
Confidence 9999999999999999999999999999995 777765 89999999999995
Q ss_pred ccccccCCcccccceeEEEeCHHHHHhcCCCc-cEEEEeeEEeeeCCCcccc----------chHHHHHHHHHHcCCCCC
Q 019555 252 SVTAGNASIISDGAAALVLVSGVKALELGLQV-IAKIRGFADAAQAPEWFTT----------APSLAIPKAIANAGLEAS 320 (339)
Q Consensus 252 ~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~-~~~i~g~~~~~~~~~~~~~----------~~~~a~~~al~~agl~~~ 320 (339)
+++.+.||+.+|||+|.||.|+...+++++.. .++|.|.....+.|+.+.. -...+++++++++|++|.
T Consensus 211 flt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpn 290 (408)
T KOG1406|consen 211 FLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPN 290 (408)
T ss_pred HHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcc
Confidence 89999999999999999999999999998753 3688888888776554321 125799999999999999
Q ss_pred CCcEEEeecccccccccC
Q 019555 321 QIDYYEINEAFSVRNHVP 338 (339)
Q Consensus 321 DId~~~~hd~F~~~~l~~ 338 (339)
||+++|+||||+..+|+.
T Consensus 291 dvqvielhdcfs~nelit 308 (408)
T KOG1406|consen 291 DVQVIELHDCFSANELIT 308 (408)
T ss_pred cceEEEeecccchhhhhh
Confidence 999999999999988763
No 59
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-37 Score=271.71 Aligned_cols=324 Identities=29% Similarity=0.399 Sum_probs=281.5
Q ss_pred CCCCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCC
Q 019555 10 IKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS 89 (339)
Q Consensus 10 ~~~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~ 89 (339)
.+++.|++|.+.||||-.....+++.-+.||+.++...+|++..++.+.+|.|++|++...-..++++++.++..|++..
T Consensus 39 kn~~nivlvdgvrtpfl~sgt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdk 118 (465)
T KOG1392|consen 39 KNMPNIVLVDGVRTPFLVSGTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDK 118 (465)
T ss_pred cCCCceEEEecccCceeecccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCC
Confidence 47889999999999999888889999999999999999999999999999999999998887788999999999999988
Q ss_pred cceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhc--------cCCCCCccccccccccccc-
Q 019555 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARK--------GSRLGHDTIVDGMLKDGLW- 160 (339)
Q Consensus 90 ~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~- 160 (339)
.|..++..+|.|+..|+.++..+|.+|++|+++.+|+|.||..|..+..... ...+|+.....+.++..|-
T Consensus 119 tpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~nfla 198 (465)
T KOG1392|consen 119 TPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKNFLA 198 (465)
T ss_pred CccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhhccC
Confidence 9999999999999999999999999999999999999999999987753211 1123333222222222222
Q ss_pred -------cccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCc
Q 019555 161 -------DVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE 233 (339)
Q Consensus 161 -------~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r 233 (339)
+-.++.-||..+.|.+..|.++|.+++.+++++|.-+..+...++|.+ ++|+.++.+.+. ..+|+++|
T Consensus 199 pelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftd-vvpfkv~gkd~~----t~kdngir 273 (465)
T KOG1392|consen 199 PELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTD-VVPFKVDGKDPK----TIKDNGIR 273 (465)
T ss_pred cCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccc-eeeEecCCCCcc----eecCCCcc
Confidence 223456799999999999999999999999999999999999999987 468888766543 45999999
Q ss_pred ccCHHHHhcCCCCCC-CCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCc-cccchHHHHHHH
Q 019555 234 KFDAAKLMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-FTTAPSLAIPKA 311 (339)
Q Consensus 234 ~~~~~~~~~~~~~~~-~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-~~~~~~~a~~~a 311 (339)
..++|++.+++|.|- |.|.+++.|.+.+.|||.|.++.++|.|...|.+|.+|+..+-+.+.+|.+ +..+|+..+..+
T Consensus 274 vssle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgpay~ipkl 353 (465)
T KOG1392|consen 274 VSSLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGPAYVIPKL 353 (465)
T ss_pred cCCHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheecccccccHHH
Confidence 999999999999986 449999999999999999999999999999999999999999888776654 557899999999
Q ss_pred HHHcCCCCCCCcEEEeecccccccccC
Q 019555 312 IANAGLEASQIDYYEINEAFSVRNHVP 338 (339)
Q Consensus 312 l~~agl~~~DId~~~~hd~F~~~~l~~ 338 (339)
|+++||+.+|||.||+|++|+.|.++-
T Consensus 354 l~kagltlkdid~feiheafagqilan 380 (465)
T KOG1392|consen 354 LDKAGLTLKDIDVFEIHEAFAGQILAN 380 (465)
T ss_pred HHHcCCcccccchhhhHHHHhHHHHhh
Confidence 999999999999999999999998763
No 60
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=99.90 E-value=1.1e-22 Score=190.26 Aligned_cols=202 Identities=19% Similarity=0.232 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCccCeEEEEeecCCC------------CC--------------CcHHHHHHHHcCCCC
Q 019555 37 ATKLGSIAIECALKRANVK--PLLVQEVFFGNVLSAN------------LG--------------QAPARQAALGAGIPN 88 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~--~~~Id~i~~g~~~~~~------------~~--------------~~~~~~ia~~lgl~~ 88 (339)
..+++..|+++||+++|+. ++.+ ++++|+..+.. .+ ..++.+++..+|+
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l-- 80 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHF-- 80 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCC--
Confidence 4578899999999999974 3332 56666654431 00 1366788889999
Q ss_pred CcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcH
Q 019555 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (339)
Q Consensus 89 ~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (339)
++|.+++.++|+|++.||..|+++|++|++|.+||+|+|.... +.... +| ..+
T Consensus 81 ~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~-~~~~~--------------------~f------~~~ 133 (342)
T PRK14691 81 KGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVID-TVSLA--------------------GF------AAA 133 (342)
T ss_pred CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHHHH--------------------HH------HHh
Confidence 5799999999999999999999999999999999999997654 22110 00 000
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCC
Q 019555 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (339)
Q Consensus 169 ~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 248 (339)
+.++ . . .-.+|+..+||||.+
T Consensus 134 ~~ls----------------------------~---~------------------~~~~p~~~~rPFd~~---------- 154 (342)
T PRK14691 134 RALS----------------------------T---H------------------FNSTPEKASRPFDTA---------- 154 (342)
T ss_pred hhhh----------------------------c---C------------------CCCCCCcCCCCCCCC----------
Confidence 0000 0 0 002456678888877
Q ss_pred CCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeC-----CCccccchHHHHHHHHHHcCCCCCCCc
Q 019555 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 249 ~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~DId 323 (339)
++|++ ++|||+++||++++.+++++.+++++|.|++...+. +...+.++.++++++|+++||+++|||
T Consensus 155 r~G~v-------~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dId 227 (342)
T PRK14691 155 RDGFV-------MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQ 227 (342)
T ss_pred CCCcc-------ccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCC
Confidence 78999 899999999999999999999999999999998874 223345668999999999999999999
Q ss_pred EEEeecccccc
Q 019555 324 YYEINEAFSVR 334 (339)
Q Consensus 324 ~~~~hd~F~~~ 334 (339)
+++.|++|+..
T Consensus 228 yIeaHgtgT~~ 238 (342)
T PRK14691 228 HLNAHATSTPV 238 (342)
T ss_pred EEEecCCCCcC
Confidence 99999999874
No 61
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.90 E-value=5.8e-23 Score=198.01 Aligned_cols=199 Identities=23% Similarity=0.312 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCe----EEEEeecCCC--------------------------CCCcHHHHHHHHcCCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAGIP 87 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~----i~~g~~~~~~--------------------------~~~~~~~~ia~~lgl~ 87 (339)
.+|+.+++++||+|+|++++++|. +++|+..+.. .....+.+++..+|+
T Consensus 72 ~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl- 150 (407)
T TIGR03150 72 IQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA- 150 (407)
T ss_pred HHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC-
Confidence 579999999999999999999987 5554322110 011245678888999
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCc
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
.++.++++++|+|++.||..|+++|++|++|.+||+|+|.+.. |....
T Consensus 151 -~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~-~~~~~------------------------------ 198 (407)
T TIGR03150 151 -KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAIT-PLGIA------------------------------ 198 (407)
T ss_pred -CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCC-HHHHH------------------------------
Confidence 4799999999999999999999999999999999999997654 22110
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
+..+.+++.+++ .++...++|++.+
T Consensus 199 -~~~~~~~ls~~~---------------------------------------------~~~~~~~~pfd~~--------- 223 (407)
T TIGR03150 199 -GFAAMKALSTRN---------------------------------------------DDPEKASRPFDKD--------- 223 (407)
T ss_pred -HHHHhCcccCCC---------------------------------------------CCCCcCCCCCcCC---------
Confidence 000000000000 0112233444433
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeC-----CCccccchHHHHHHHHHHcCCCCCCC
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQI 322 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~DI 322 (339)
.+|++ ++|||+++||++++.|++.+.+++++|.|++...+. +...+.+...+++++|+++|++++||
T Consensus 224 -~~g~~-------~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dI 295 (407)
T TIGR03150 224 -RDGFV-------MGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDV 295 (407)
T ss_pred -CCcEE-------EeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHC
Confidence 34666 799999999999999999999999999999988652 22223346789999999999999999
Q ss_pred cEEEeecccc
Q 019555 323 DYYEINEAFS 332 (339)
Q Consensus 323 d~~~~hd~F~ 332 (339)
|++|+|++++
T Consensus 296 d~ve~h~tgt 305 (407)
T TIGR03150 296 DYINAHGTST 305 (407)
T ss_pred CEEeCcCCCC
Confidence 9999999999
No 62
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.89 E-value=1.8e-22 Score=189.27 Aligned_cols=207 Identities=27% Similarity=0.308 Sum_probs=158.2
Q ss_pred ceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCC----CCccCeEEEEeecCCCC-----------------
Q 019555 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVK----PLLVQEVFFGNVLSANL----------------- 72 (339)
Q Consensus 14 ~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~----~~~Id~i~~g~~~~~~~----------------- 72 (339)
+++|+|+|.+ ..+|+.+|+++||+++|++ +++||.+++++..+...
T Consensus 1 ~~~i~g~g~~-------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (332)
T cd00825 1 RAVITGLGSY-------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVV 67 (332)
T ss_pred CceEEcccHH-------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchh
Confidence 4789999987 6899999999999999999 89999999988766532
Q ss_pred ----CCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCc
Q 019555 73 ----GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD 148 (339)
Q Consensus 73 ----~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~ 148 (339)
.+..+.+++..+|+ .++.+++..+|+|+..+|..|.++|++|+++++||+++|..+. +....
T Consensus 68 ~~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~-~~~~~----------- 133 (332)
T cd00825 68 TKAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAA-PMDCE----------- 133 (332)
T ss_pred hcccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccC-HHHHH-----------
Confidence 34567889999999 4799999999999999999999999999999999999998764 21110
Q ss_pred cccccccccccccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeec
Q 019555 149 TIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDK 228 (339)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 228 (339)
+... .+. .++
T Consensus 134 -------------------~~~~-------------------------------~~~--------------------~~~ 143 (332)
T cd00825 134 -------------------FDAM-------------------------------GAL--------------------STP 143 (332)
T ss_pred -------------------HHhh-------------------------------ccc--------------------cCC
Confidence 0000 000 011
Q ss_pred CCCCcccCHHHHhcCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCcc-----ccc
Q 019555 229 DEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF-----TTA 303 (339)
Q Consensus 229 ~~~~r~~~~~~~~~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~-----~~~ 303 (339)
+..+++++ ...++..+||||+|+||++++.+++.+.++++++.+.+...+..... ...
T Consensus 144 ~~~~~~~~-----------------~~~~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 206 (332)
T cd00825 144 EKASRTFD-----------------AAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEG 206 (332)
T ss_pred CCCCCCCC-----------------CCCCCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHH
Confidence 11122221 11234448999999999999999988888889999998766532211 133
Q ss_pred hHHHHHHHHHHcCCCCCCCcEEEeecccccc
Q 019555 304 PSLAIPKAIANAGLEASQIDYYEINEAFSVR 334 (339)
Q Consensus 304 ~~~a~~~al~~agl~~~DId~~~~hd~F~~~ 334 (339)
..++++++|+++|++++|||++.+|+.++..
T Consensus 207 ~~~~i~~al~~agl~~~did~~~~h~~~~~~ 237 (332)
T cd00825 207 LARAAKEALAVAGLTVWDIDYLVAHGTGTPI 237 (332)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEEccCCCCCC
Confidence 4689999999999999999999999988653
No 63
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.89 E-value=8.6e-23 Score=197.30 Aligned_cols=204 Identities=23% Similarity=0.314 Sum_probs=153.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCC-CCccCeEEEEeecCCCCC------------------------------CcHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVK-PLLVQEVFFGNVLSANLG------------------------------QAPARQAALG 83 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~-~~~Id~i~~g~~~~~~~~------------------------------~~~~~~ia~~ 83 (339)
....+|+..|+++||+|+|++ +++++...+|...+...+ ..++.+|+..
T Consensus 75 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 154 (421)
T PTZ00050 75 SRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIK 154 (421)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHH
Confidence 355899999999999999998 777776555544433211 1245678888
Q ss_pred cCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccccc
Q 019555 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (339)
Q Consensus 84 lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (339)
+|+ .+|++++.++|+|++.||..|+++|++|++|.+||+|+|.+.. |.... ++
T Consensus 155 ~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~-p~~~~--------------------~f---- 207 (421)
T PTZ00050 155 HKL--KGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASIT-PVSFA--------------------GF---- 207 (421)
T ss_pred hCC--CCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCC-HHHHH--------------------HH----
Confidence 899 5799999999999999999999999999999999999998553 32211 00
Q ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcC
Q 019555 164 NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243 (339)
Q Consensus 164 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 243 (339)
. . .+.+... ...+++..+||++.+
T Consensus 208 -----~--~------------------------------~~~l~~~--------------~~~~p~~~~~pfd~~----- 231 (421)
T PTZ00050 208 -----S--R------------------------------MRALCTK--------------YNDDPQRASRPFDKD----- 231 (421)
T ss_pred -----H--h------------------------------hhccccC--------------cCCCCCccCCCCcCC-----
Confidence 0 0 0000000 001234456666655
Q ss_pred CCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeC-----CCccccchHHHHHHHHHH-cCC
Q 019555 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIAN-AGL 317 (339)
Q Consensus 244 ~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~-agl 317 (339)
++|++ ++|||+++||++++.|++++.+++++|.|++.+.+. |...+.+..++++++|++ +|+
T Consensus 232 -----~~G~~-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi 299 (421)
T PTZ00050 232 -----RAGFV-------MGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANI 299 (421)
T ss_pred -----CCCEe-------eccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCC
Confidence 55777 799999999999999999999999999999998763 223344567899999999 999
Q ss_pred CCCCCcEEEeeccccc
Q 019555 318 EASQIDYYEINEAFSV 333 (339)
Q Consensus 318 ~~~DId~~~~hd~F~~ 333 (339)
+++|||++|+|++++.
T Consensus 300 ~~~dId~ie~hgtgt~ 315 (421)
T PTZ00050 300 NINDVDYVNAHATSTP 315 (421)
T ss_pred ChhhCCEEECCCccCC
Confidence 9999999999999984
No 64
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.89 E-value=2.2e-22 Score=194.25 Aligned_cols=200 Identities=24% Similarity=0.315 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCe----EEEEeecCC--------------------------CCCCcHHHHHHHHcCCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQE----VFFGNVLSA--------------------------NLGQAPARQAALGAGIP 87 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~----i~~g~~~~~--------------------------~~~~~~~~~ia~~lgl~ 87 (339)
.+|+.+++++||+|+|++++++|. +++|+..+. ......+.+++..+|+
T Consensus 73 ~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl- 151 (411)
T PRK07314 73 IQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA- 151 (411)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC-
Confidence 578899999999999999998884 666543221 0012355678899999
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCc
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
.+|.++++.+|+|++.||..|+++|++|++|++||+|+|.+.. |...
T Consensus 152 -~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~-~~~~------------------------------- 198 (411)
T PRK07314 152 -KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAIT-PLGI------------------------------- 198 (411)
T ss_pred -CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCC-HHHH-------------------------------
Confidence 4799999999999999999999999999999999999997654 2211
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
.+..+.+ .+.. ...+|+..+||++.+
T Consensus 199 ~~~~~~~------------------------------~ls~---------------~~~~p~~~~~pfd~~--------- 224 (411)
T PRK07314 199 AGFAAAR------------------------------ALST---------------RNDDPERASRPFDKD--------- 224 (411)
T ss_pred HHHHHhc------------------------------cccC---------------CCCCCCcCcCCCcCC---------
Confidence 0110000 0000 001234455555543
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeC-----CCccccchHHHHHHHHHHcCCCCCCC
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQI 322 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~DI 322 (339)
.+|++ ++|||+++||++++.|++++.+++++|.|++...+. +...+.+...+++++|+++|++++||
T Consensus 225 -~dG~~-------~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dI 296 (411)
T PRK07314 225 -RDGFV-------MGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDI 296 (411)
T ss_pred -CCCEe-------EEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHC
Confidence 34666 899999999999999999999999999999988652 22233446789999999999999999
Q ss_pred cEEEeeccccc
Q 019555 323 DYYEINEAFSV 333 (339)
Q Consensus 323 d~~~~hd~F~~ 333 (339)
|+++.|+.++.
T Consensus 297 d~v~~hgtgt~ 307 (411)
T PRK07314 297 DYINAHGTSTP 307 (411)
T ss_pred CEEEccccCCc
Confidence 99999999883
No 65
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.89 E-value=2.4e-22 Score=194.72 Aligned_cols=201 Identities=22% Similarity=0.272 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCcc-C----eEEEEeecCCC--------------------------CCCcHHHHHHHHcCC
Q 019555 38 TKLGSIAIECALKRANVKPLLV-Q----EVFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~I-d----~i~~g~~~~~~--------------------------~~~~~~~~ia~~lgl 86 (339)
..|+..++++||+|+|++++++ + ++++|+..+.. .....+.+|+..+|+
T Consensus 83 ~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 162 (424)
T PRK06333 83 ILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGF 162 (424)
T ss_pred HHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhCC
Confidence 3678899999999999988776 4 46666543221 011245678889999
Q ss_pred CCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCC
Q 019555 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (339)
Q Consensus 87 ~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (339)
.+|.++++++|+|++.||..|+++|++|++|.+||+|+|.+.+ +....
T Consensus 163 --~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~~~~----------------------------- 210 (424)
T PRK06333 163 --KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAID-RVSLA----------------------------- 210 (424)
T ss_pred --CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHH-----------------------------
Confidence 5799999999999999999999999999999999999998654 22110
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCC
Q 019555 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (339)
Q Consensus 167 ~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 246 (339)
+... ...+... .-.+++..+||++.+
T Consensus 211 --~f~~------------------------------~~~l~~~--------------~~~~p~~~~~Pfd~~-------- 236 (424)
T PRK06333 211 --GFAA------------------------------ARALSTR--------------FNDAPEQASRPFDRD-------- 236 (424)
T ss_pred --HHHH------------------------------ccccccc--------------CCCCCCcCCCCCCCC--------
Confidence 0000 0000000 001234566666655
Q ss_pred CCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----CccccchHHHHHHHHHHcCCCCCC
Q 019555 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQ 321 (339)
Q Consensus 247 ~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~D 321 (339)
++|++ ++|||+++||++++.|++.+.+++++|.|++.+++.. ...+.+..++++++|+++|++++|
T Consensus 237 --~~G~~-------~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~d 307 (424)
T PRK06333 237 --RDGFV-------MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEE 307 (424)
T ss_pred --CCCeE-------EecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHH
Confidence 66888 7999999999999999999999999999999987632 112334578999999999999999
Q ss_pred CcEEEeeccccc
Q 019555 322 IDYYEINEAFSV 333 (339)
Q Consensus 322 Id~~~~hd~F~~ 333 (339)
||+++.|++++.
T Consensus 308 Id~i~~hgtgt~ 319 (424)
T PRK06333 308 VQHLNAHATSTP 319 (424)
T ss_pred CCEEeccCCCCc
Confidence 999999999987
No 66
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.88 E-value=8.1e-22 Score=177.82 Aligned_cols=171 Identities=32% Similarity=0.364 Sum_probs=150.2
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~ 114 (339)
.+..+|+.+|+++||+++|+++++||.+++++..+....+..+.+++..+|++ ..+.+++..+|+|+..||..|+++|+
T Consensus 5 ~~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i~ 83 (254)
T cd00327 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQVQ 83 (254)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHHH
Confidence 34789999999999999999999999999999888765677889999999997 68999999999999999999999999
Q ss_pred cCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 019555 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~ 194 (339)
+|+++.+||+++|..
T Consensus 84 ~g~~~~~lv~~~e~~----------------------------------------------------------------- 98 (254)
T cd00327 84 NGKADIVLAGGSEEF----------------------------------------------------------------- 98 (254)
T ss_pred CCCCCEEEEEeccee-----------------------------------------------------------------
Confidence 999999999999860
Q ss_pred HHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCCCCccccccCCcccccceeEEEeCHH
Q 019555 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (339)
Q Consensus 195 ~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~ 274 (339)
+ ++|||+|+||++++
T Consensus 99 ----------------------------------------------------------~-------~gdGAaa~vL~~~~ 113 (254)
T cd00327 99 ----------------------------------------------------------V-------FGDGAAAAVVESEE 113 (254)
T ss_pred ----------------------------------------------------------e-------ecceEEEEEECcHH
Confidence 1 69999999999999
Q ss_pred HHHhcCCCccEEEEeeEEeeeCCCc----cccchHHHHHHHHHHcCCCCCCCcEEEeecccccccc
Q 019555 275 KALELGLQVIAKIRGFADAAQAPEW----FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVRNH 336 (339)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~~~~~----~~~~~~~a~~~al~~agl~~~DId~~~~hd~F~~~~l 336 (339)
.+++.+.+++.+|.++....+.+.. ......++++++|+++|++++|||++++|++|+....
T Consensus 114 ~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~ 179 (254)
T cd00327 114 HALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGD 179 (254)
T ss_pred HHHHCCCceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcccc
Confidence 9988888888999998877653321 2234578999999999999999999999999987643
No 67
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.88 E-value=1.7e-21 Score=189.02 Aligned_cols=201 Identities=24% Similarity=0.296 Sum_probs=149.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCC-----ccCeEEEEeecCCCC--------------------------CCcHHHHHHHHcC
Q 019555 37 ATKLGSIAIECALKRANVKPL-----LVQEVFFGNVLSANL--------------------------GQAPARQAALGAG 85 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~-----~Id~i~~g~~~~~~~--------------------------~~~~~~~ia~~lg 85 (339)
...|+.+|+.+||+|||+++. +..++++|+..+... ...++.+|+..+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 457899999999999998642 456788886543210 1125567889999
Q ss_pred CCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCC
Q 019555 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (339)
Q Consensus 86 l~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (339)
+ .+|.++++++|+|+..||..|+++|++|++|.+||+|+|.... +...
T Consensus 173 l--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~~~----------------------------- 220 (437)
T PLN02836 173 F--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSID-ALSI----------------------------- 220 (437)
T ss_pred C--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHHH-----------------------------
Confidence 8 5799999999999999999999999999999999999997543 2111
Q ss_pred CcHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCC
Q 019555 166 FGMGVCA-EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (339)
Q Consensus 166 ~~~~~~a-~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 244 (339)
.+... +.+..+++ .+++..+||++.+
T Consensus 221 --~~~~~~~~l~~~~~---------------------------------------------~~p~~~~~pfd~~------ 247 (437)
T PLN02836 221 --AGFSRSRALSTKFN---------------------------------------------SCPTEASRPFDCD------ 247 (437)
T ss_pred --HHHHHhhhhhcccC---------------------------------------------CCcccccCCcccC------
Confidence 00000 00000000 1233455666655
Q ss_pred CCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCC-----ccccchHHHHHHHHHHcCCCC
Q 019555 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEA 319 (339)
Q Consensus 245 ~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~ 319 (339)
++|++ ++|||+++||++++.|++.+.+++++|.|++.+.+... ..+....++++++|+++|+++
T Consensus 248 ----~~G~~-------~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~ 316 (437)
T PLN02836 248 ----RDGFV-------IGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHP 316 (437)
T ss_pred ----CCCee-------eecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCH
Confidence 55777 89999999999999999999999999999999876321 112334679999999999999
Q ss_pred CCCcEEEeeccccc
Q 019555 320 SQIDYYEINEAFSV 333 (339)
Q Consensus 320 ~DId~~~~hd~F~~ 333 (339)
+|||++++|+.++.
T Consensus 317 ~dId~ve~hgtgt~ 330 (437)
T PLN02836 317 NQVDYVNAHATSTP 330 (437)
T ss_pred hHcCEEEccCCcCc
Confidence 99999999999984
No 68
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.87 E-value=8.1e-22 Score=189.77 Aligned_cols=200 Identities=25% Similarity=0.305 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCCC--------------------------CCcHHHHHHHHcCCCC
Q 019555 39 KLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL--------------------------GQAPARQAALGAGIPN 88 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~~--------------------------~~~~~~~ia~~lgl~~ 88 (339)
.++..++++||+|+|+++...+ ++++|+..+... ...++.+++..+|+
T Consensus 76 ~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl-- 153 (414)
T PRK08722 76 QYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL-- 153 (414)
T ss_pred HHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC--
Confidence 5788899999999999765444 477776543210 11367788899999
Q ss_pred CcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcH
Q 019555 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (339)
Q Consensus 89 ~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (339)
.+|.++++++|+|++.||..|+++|++|++|.+||+|+|.... +.... +|
T Consensus 154 ~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~~--------------------~f--------- 203 (414)
T PRK08722 154 RGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKAST-PLGMA--------------------GF--------- 203 (414)
T ss_pred CCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHHHH--------------------HH---------
Confidence 4799999999999999999999999999999999999998654 22110 00
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCC
Q 019555 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (339)
Q Consensus 169 ~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 248 (339)
.+ .+.+.. . + .+|+..+|||+.+
T Consensus 204 --~~------------------------------~~~ls~-------~---~-----~~p~~~~rpfd~~---------- 226 (414)
T PRK08722 204 --GA------------------------------AKALST-------R---N-----DEPQKASRPWDKD---------- 226 (414)
T ss_pred --HH------------------------------cCCccc-------C---C-----CCCccccCcCcCC----------
Confidence 00 000000 0 0 1345677888766
Q ss_pred CCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeC-----CCccccchHHHHHHHHHHcCCCCCCCc
Q 019555 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 249 ~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~DId 323 (339)
++|++ ++|||+++||++++.|++++.+++++|.|++...+. |...+.+..++++++|+++|++++|||
T Consensus 227 ~~G~~-------~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did 299 (414)
T PRK08722 227 RDGFV-------LGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIG 299 (414)
T ss_pred CCceE-------eeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcC
Confidence 67999 899999999999999999999999999999998763 222223347899999999999999999
Q ss_pred EEEeecccccc
Q 019555 324 YYEINEAFSVR 334 (339)
Q Consensus 324 ~~~~hd~F~~~ 334 (339)
++|.|++++..
T Consensus 300 ~ie~hgtgt~~ 310 (414)
T PRK08722 300 YVNAHGTSTPA 310 (414)
T ss_pred EEEccCccCCC
Confidence 99999999864
No 69
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=99.87 E-value=7.4e-22 Score=181.05 Aligned_cols=110 Identities=19% Similarity=0.167 Sum_probs=100.1
Q ss_pred ccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCc
Q 019555 21 ARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCS 100 (339)
Q Consensus 21 ~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~ca 100 (339)
.+|++..+.-..++.+..+|+.+|+++||++||+++++||.|++++.+++...|..+..++..||+. +.+.|++..+|+
T Consensus 36 ~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~aaCs 114 (323)
T COG0332 36 TRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQAACS 114 (323)
T ss_pred eecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-CcceeechhhhH
Confidence 3455544444445789999999999999999999999999999999999988899999999999998 589999999999
Q ss_pred cHHHHHHHHHHHHHcCCCceEEEEccccccC
Q 019555 101 SGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 101 s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
+.+.||..|..+|++|.+++|||+|.|.+|+
T Consensus 115 gf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~ 145 (323)
T COG0332 115 GFLYALSVADGLIRSGGYKNVLVVGAETLSR 145 (323)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEehhHhhc
Confidence 9999999999999999999999999999986
No 70
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.87 E-value=1.5e-21 Score=189.22 Aligned_cols=196 Identities=27% Similarity=0.342 Sum_probs=148.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCCC-------------------CCcHHHHHHHHcCCCCCcceee
Q 019555 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL-------------------GQAPARQAALGAGIPNSVVCTT 94 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~~-------------------~~~~~~~ia~~lgl~~~~~~~~ 94 (339)
..|+.+|+++||+|+|+++++|| .+++|+..+++. ....+.+++..+|+. ++.++
T Consensus 88 ~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~~ 165 (424)
T smart00825 88 QRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSVT 165 (424)
T ss_pred HHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCccc
Confidence 45999999999999999999999 788886543321 223566789999994 69999
Q ss_pred ecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHHHH
Q 019555 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174 (339)
Q Consensus 95 v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 174 (339)
+..+|+|+..||..|+++|++|++|+|||+|+|.... +.... +...
T Consensus 166 v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~-~~~~~-------------------------------~~~~-- 211 (424)
T smart00825 166 VDTACSSSLVALHLACQSLRSGECDMALAGGVNLILS-PDTFV-------------------------------GFSR-- 211 (424)
T ss_pred cccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCC-HHHHH-------------------------------HHhh--
Confidence 9999999999999999999999999999999997654 11110 0000
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCCCCccc
Q 019555 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254 (339)
Q Consensus 175 ~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~g~l~ 254 (339)
.+. +.+++.+||++.+ .+|++
T Consensus 212 ----------------------------~~~--------------------l~~~~~~~pf~~~----------~~g~~- 232 (424)
T smart00825 212 ----------------------------AGM--------------------LSPDGRCKTFDAD----------ADGYV- 232 (424)
T ss_pred ----------------------------cCC--------------------CCCCCCCCCCCCC----------CCccc-
Confidence 000 1222334444433 34666
Q ss_pred cccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCc-----cccchHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 255 ~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
++|||+++||++++.+++.+.+++++|.|++...+.... .......+++++|+++|++++|||+++.|+
T Consensus 233 ------~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~ 306 (424)
T smart00825 233 ------RGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHG 306 (424)
T ss_pred ------ccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeC
Confidence 899999999999999999998889999999988663221 112236899999999999999999999999
Q ss_pred ccccc
Q 019555 330 AFSVR 334 (339)
Q Consensus 330 ~F~~~ 334 (339)
+++..
T Consensus 307 tgt~~ 311 (424)
T smart00825 307 TGTPL 311 (424)
T ss_pred CCCCC
Confidence 88753
No 71
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.86 E-value=2.6e-21 Score=186.55 Aligned_cols=203 Identities=25% Similarity=0.280 Sum_probs=151.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCc-cCe----EEEEeecCCC----------------------CC--CcHHHHHHHHcCC
Q 019555 36 SATKLGSIAIECALKRANVKPLL-VQE----VFFGNVLSAN----------------------LG--QAPARQAALGAGI 86 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~-Id~----i~~g~~~~~~----------------------~~--~~~~~~ia~~lgl 86 (339)
....|+.+|+++||+|+|+++++ ++. +++|+..+.. .. ..++.+++..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45688999999999999998877 653 5555432210 01 4567788999999
Q ss_pred CCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCC
Q 019555 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (339)
Q Consensus 87 ~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (339)
. .+|.++++++|+|++.||..|+++|++|++|.+||+|+|.++ +.... .+
T Consensus 151 ~-~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~--~~~~~--------------------~f------- 200 (407)
T cd00828 151 S-HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL--EEGLS--------------------GF------- 200 (407)
T ss_pred C-CCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC--hHHHH--------------------HH-------
Confidence 4 369999999999999999999999999999999999999876 32111 00
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCC
Q 019555 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (339)
Q Consensus 167 ~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 246 (339)
.. .+.+..+ ...+...+||++..
T Consensus 201 --~~--------------------------------~~~ls~~---------------~~~~~~~~~pfd~~-------- 223 (407)
T cd00828 201 --AN--------------------------------MGALSTA---------------EEEPEEMSRPFDET-------- 223 (407)
T ss_pred --HH--------------------------------cCCCCCC---------------CCCCCcccCCCcCC--------
Confidence 00 0001000 00122345555433
Q ss_pred CCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCcc----ccchHHHHHHHHHHcCCCCCCC
Q 019555 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF----TTAPSLAIPKAIANAGLEASQI 322 (339)
Q Consensus 247 ~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~----~~~~~~a~~~al~~agl~~~DI 322 (339)
++|++ ++|||+++||++++.|++.+.+++++|.|++...+..... +.+..++++++|+++|++++||
T Consensus 224 --~~G~~-------~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~Agi~~~dI 294 (407)
T cd00828 224 --RDGFV-------EAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSLDDL 294 (407)
T ss_pred --CCcEE-------eecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHc
Confidence 45777 8999999999999999999999999999999987643221 2345789999999999999999
Q ss_pred cEEEeecccccc
Q 019555 323 DYYEINEAFSVR 334 (339)
Q Consensus 323 d~~~~hd~F~~~ 334 (339)
|+++.|+..+..
T Consensus 295 d~i~~hgtgt~~ 306 (407)
T cd00828 295 DVISAHGTSTPA 306 (407)
T ss_pred CEEecccccCcc
Confidence 999999998853
No 72
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.86 E-value=7.2e-21 Score=180.87 Aligned_cols=194 Identities=28% Similarity=0.342 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHHHcCCCCC-ccCeEEEEeecCCC-----------------------------CCCcHHHHHHHHcCCC
Q 019555 38 TKLGSIAIECALKRANVKPL-LVQEVFFGNVLSAN-----------------------------LGQAPARQAALGAGIP 87 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~-~Id~i~~g~~~~~~-----------------------------~~~~~~~~ia~~lgl~ 87 (339)
..++..|+++||+|+|+++. +--++++|+..+.. ....++.+++..+|+
T Consensus 57 ~~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~- 135 (381)
T PRK05952 57 EDLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGT- 135 (381)
T ss_pred cHHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCC-
Confidence 34777899999999999652 22256777643320 011356778889999
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCc
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
.+|.+++.++|+|+..||..|+++|++|++|.+||+|+|.... +.... ++
T Consensus 136 -~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~~--------------------~~-------- 185 (381)
T PRK05952 136 -QGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPIT-PLTLA--------------------GF-------- 185 (381)
T ss_pred -CCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHHHH--------------------HH--------
Confidence 4799999999999999999999999999999999999996333 22110 00
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
.. .+. +. .+.+|||+.+
T Consensus 186 ---~~------------------------------~~~--------------------ls-~~~~rPfd~~--------- 202 (381)
T PRK05952 186 ---QQ------------------------------MGA--------------------LA-KTGAYPFDRQ--------- 202 (381)
T ss_pred ---Hh------------------------------cCC--------------------cC-CCCCCCCCCC---------
Confidence 00 000 11 1346666665
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----CccccchHHHHHHHHHHcCCCCCCC
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQI 322 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~DI 322 (339)
++|++ ++|||+++||++++.|++++.+++++|.|++.+.+.. ...+....++++++|+++|++++||
T Consensus 203 -r~G~v-------~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dI 274 (381)
T PRK05952 203 -REGLV-------LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDI 274 (381)
T ss_pred -CCCcc-------ccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHe
Confidence 67888 8999999999999999999999999999999987632 2223345789999999999999999
Q ss_pred cEEEeeccccc
Q 019555 323 DYYEINEAFSV 333 (339)
Q Consensus 323 d~~~~hd~F~~ 333 (339)
|+++.|..-+.
T Consensus 275 d~i~~hgtgt~ 285 (381)
T PRK05952 275 DYIHAHGTATR 285 (381)
T ss_pred eEEEccCCCCC
Confidence 99999987654
No 73
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.86 E-value=7e-21 Score=187.28 Aligned_cols=199 Identities=20% Similarity=0.213 Sum_probs=150.0
Q ss_pred HHHHHHHHHHHHHcCCCCC---ccC----eEEEEeecCCCC-------------------------CCcHHHHHHHHcCC
Q 019555 39 KLGSIAIECALKRANVKPL---LVQ----EVFFGNVLSANL-------------------------GQAPARQAALGAGI 86 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~---~Id----~i~~g~~~~~~~-------------------------~~~~~~~ia~~lgl 86 (339)
.++..|+++||+|+|++++ .++ ++++|+..+... ....+..++..+|+
T Consensus 201 ~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl 280 (540)
T PLN02787 201 LYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGW 280 (540)
T ss_pred HHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCC
Confidence 4778899999999999764 222 577776543210 01245678888999
Q ss_pred CCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCC
Q 019555 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (339)
Q Consensus 87 ~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (339)
.+|.++++++|+|+..||..|+++|++|++|.+||+|+|.... |..+.
T Consensus 281 --~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~-p~~~~----------------------------- 328 (540)
T PLN02787 281 --MGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAII-PIGLG----------------------------- 328 (540)
T ss_pred --CCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccC-HHHHH-----------------------------
Confidence 4799999999999999999999999999999999999997543 32110
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCC
Q 019555 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (339)
Q Consensus 167 ~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 246 (339)
+..+.+.+ + .. -.+|+..+||||.+
T Consensus 329 --~f~~~~aL-------------S----------------~~----------------~~~p~~~~rPFD~~-------- 353 (540)
T PLN02787 329 --GFVACRAL-------------S----------------QR----------------NDDPTKASRPWDMN-------- 353 (540)
T ss_pred --HHHHHHHh-------------h----------------cc----------------CCCcccccCCcccC--------
Confidence 00000000 0 00 02355678888877
Q ss_pred CCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----CccccchHHHHHHHHHHcCCCCCC
Q 019555 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQ 321 (339)
Q Consensus 247 ~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~D 321 (339)
++|++ +||||+++||++.+.|++.+.+++++|.|++.+.+.. ...+.+...+++++|+++|++++|
T Consensus 354 --rdGfv-------~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~d 424 (540)
T PLN02787 354 --RDGFV-------MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKED 424 (540)
T ss_pred --CCCcc-------cccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHH
Confidence 77999 8999999999999999999999999999999987642 222334578999999999999999
Q ss_pred CcEEEeeccccc
Q 019555 322 IDYYEINEAFSV 333 (339)
Q Consensus 322 Id~~~~hd~F~~ 333 (339)
||||+.|..-|.
T Consensus 425 IdyInaHGTGT~ 436 (540)
T PLN02787 425 VNYINAHATSTK 436 (540)
T ss_pred CcEEEccCccCC
Confidence 999999986553
No 74
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.85 E-value=9e-22 Score=176.85 Aligned_cols=201 Identities=26% Similarity=0.350 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCC---ccCe----EEEEeecCCCC-----------------C---------CcHHHHHHHH
Q 019555 37 ATKLGSIAIECALKRANVKPL---LVQE----VFFGNVLSANL-----------------G---------QAPARQAALG 83 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~---~Id~----i~~g~~~~~~~-----------------~---------~~~~~~ia~~ 83 (339)
+..|+.-|+++||+|+++.+. +.|. +.+|...++.. . ...+.+++.+
T Consensus 94 ~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~ 173 (440)
T KOG1394|consen 94 FTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMK 173 (440)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhh
Confidence 357899999999999998654 4443 44444433310 0 0256688899
Q ss_pred cCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccccc
Q 019555 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (339)
Q Consensus 84 lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (339)
+|+ .+|...++++|+++..+|..|.++|+.|++|+.|++|.|..-. |+... +|
T Consensus 174 ~gl--~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~-Plsla--------------------GF---- 226 (440)
T KOG1394|consen 174 YGL--RGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACIN-PLSLA--------------------GF---- 226 (440)
T ss_pred hcC--cCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeec-chhhh--------------------hH----
Confidence 999 5799999999999999999999999999999999999998766 54332 11
Q ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcC
Q 019555 164 NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243 (339)
Q Consensus 164 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 243 (339)
.. .|.-..+| .+|...+||||.+
T Consensus 227 -------~r--------------------~RALSt~n-------------------------d~P~~aSRPfD~~----- 249 (440)
T KOG1394|consen 227 -------SR--------------------ARALSTRN-------------------------DNPQKASRPFDKK----- 249 (440)
T ss_pred -------HH--------------------HHHhhhcC-------------------------CCccccCCCCccC-----
Confidence 11 01101100 2456677888877
Q ss_pred CCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeee-----CCCccccchHHHHHHHHHHcCCC
Q 019555 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQ-----APEWFTTAPSLAIPKAIANAGLE 318 (339)
Q Consensus 244 ~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~ 318 (339)
++|++ +|||++.++|+.-|+|++++.++++++.|+|.++| .|+..+.+...+++++|++|||+
T Consensus 250 -----RdGFV-------mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~ 317 (440)
T KOG1394|consen 250 -----RDGFV-------MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLS 317 (440)
T ss_pred -----CCcee-------eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCC
Confidence 78999 89999999999999999999999999999999987 46667788899999999999999
Q ss_pred CCCCcEEEeeccccc
Q 019555 319 ASQIDYYEINEAFSV 333 (339)
Q Consensus 319 ~~DId~~~~hd~F~~ 333 (339)
|+||||++.|--.|.
T Consensus 318 pe~i~YvNAHATST~ 332 (440)
T KOG1394|consen 318 PEDIDYVNAHATSTP 332 (440)
T ss_pred hhhcCeeecccccCc
Confidence 999999999975543
No 75
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.85 E-value=2.3e-20 Score=177.25 Aligned_cols=201 Identities=29% Similarity=0.372 Sum_probs=155.7
Q ss_pred CHHHHHHHHHHHHHHHcCCC-CCccC---eEEEEeecCCCCC---C------------------------cHHHHHHHHc
Q 019555 36 SATKLGSIAIECALKRANVK-PLLVQ---EVFFGNVLSANLG---Q------------------------APARQAALGA 84 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~-~~~Id---~i~~g~~~~~~~~---~------------------------~~~~~ia~~l 84 (339)
....|+..|+.+|++|+|++ ....+ .+++|...+.... . ..+..++..+
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence 55789999999999999997 34453 3445544433210 0 2566888899
Q ss_pred CCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccC
Q 019555 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN 164 (339)
Q Consensus 85 gl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (339)
|+ .++.+++.++|+|+..||..|+++|+.|++|++|++|+|..-. +.... +|
T Consensus 150 g~--~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~-~~~i~--------------------gF----- 201 (412)
T COG0304 150 GL--KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAIT-PLGIA--------------------GF----- 201 (412)
T ss_pred CC--CCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccC-HHHHH--------------------HH-----
Confidence 99 4799999999999999999999999999999999999987433 22111 11
Q ss_pred CCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCC
Q 019555 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (339)
Q Consensus 165 ~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 244 (339)
..+..++ .+ + .+|...+||+|.+
T Consensus 202 -~am~Als----------------------------------t~-----------n-----d~p~~asrPfd~~------ 224 (412)
T COG0304 202 -EAMRALS----------------------------------TR-----------N-----DDPEKASRPFDKN------ 224 (412)
T ss_pred -HHHHHhc----------------------------------cC-----------C-----CCccccCCCCCCC------
Confidence 0111110 00 0 2456788888887
Q ss_pred CCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeC-----CCccccchHHHHHHHHHHcCCCC
Q 019555 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEA 319 (339)
Q Consensus 245 ~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~ 319 (339)
++|++ +++||+++||++.|+|+++|.+++++|.|++.+.+. |...+.+..++++.||+.+|+++
T Consensus 225 ----RdGfv-------~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~ 293 (412)
T COG0304 225 ----RDGFV-------IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTP 293 (412)
T ss_pred ----CCCEE-------EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCH
Confidence 88999 899999999999999999999999999999999872 44456778899999999999999
Q ss_pred CCCcEEEeecccc
Q 019555 320 SQIDYYEINEAFS 332 (339)
Q Consensus 320 ~DId~~~~hd~F~ 332 (339)
+||||++.|.--|
T Consensus 294 ~~idYinaHgTsT 306 (412)
T COG0304 294 EDIDYINAHGTST 306 (412)
T ss_pred hHCCEEeCCCccC
Confidence 9999999998655
No 76
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.85 E-value=3.2e-20 Score=178.81 Aligned_cols=202 Identities=30% Similarity=0.384 Sum_probs=148.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCe----EEEEeecCCC--------------------------CCCcHHHHHHHHcC
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~----i~~g~~~~~~--------------------------~~~~~~~~ia~~lg 85 (339)
...+|+.+|+++||+|+|++++++|. +++|...+.. .....+.+++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 34679999999999999999888775 4555433210 11346678999999
Q ss_pred CCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCC
Q 019555 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (339)
Q Consensus 86 l~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (339)
+ .++.++++.+|+|++.||..|+++|++|++|.+||+|+|..+. |....
T Consensus 150 l--~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~-p~~~~---------------------------- 198 (406)
T cd00834 150 L--RGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALIT-PLTLA---------------------------- 198 (406)
T ss_pred C--CCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccC-HHHHH----------------------------
Confidence 9 4699999999999999999999999999999999999998764 32111
Q ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCC
Q 019555 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (339)
Q Consensus 166 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 245 (339)
+... .+.+... ..+|+..++|++.+
T Consensus 199 ---~~~~------------------------------~~~l~~~---------------~~~p~~~~~pf~~~------- 223 (406)
T cd00834 199 ---GFAA------------------------------LRALSTR---------------NDDPEKASRPFDKD------- 223 (406)
T ss_pred ---HHHh------------------------------cCCcCCC---------------CCCCccCCCCCCCC-------
Confidence 0000 0000000 00122344444433
Q ss_pred CCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----CccccchHHHHHHHHHHcCCCCC
Q 019555 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEAS 320 (339)
Q Consensus 246 ~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~ 320 (339)
++|++ ++|||+++||++.+.+++.+.+++++|.|++...+.. .....+...+++++|+++|++++
T Consensus 224 ---~~g~~-------~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~ 293 (406)
T cd00834 224 ---RDGFV-------LGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPE 293 (406)
T ss_pred ---CCCEe-------eeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHH
Confidence 44666 8999999999999999999988889999999876522 11234456899999999999999
Q ss_pred CCcEEEeeccccc
Q 019555 321 QIDYYEINEAFSV 333 (339)
Q Consensus 321 DId~~~~hd~F~~ 333 (339)
|||+++.|...+.
T Consensus 294 dId~v~~h~tgt~ 306 (406)
T cd00834 294 DIDYINAHGTSTP 306 (406)
T ss_pred HCCEEecccccCc
Confidence 9999999988764
No 77
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.83 E-value=7.2e-20 Score=177.18 Aligned_cols=197 Identities=28% Similarity=0.322 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCe----EEEEeecCCC-------------------CCCcHHHHHHHHcCCCCCccee
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN-------------------LGQAPARQAALGAGIPNSVVCT 93 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~----i~~g~~~~~~-------------------~~~~~~~~ia~~lgl~~~~~~~ 93 (339)
..+|+.+|+++||+|+|++++++|. +++|+..+++ .....+..++..+|+. ++.+
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~~ 164 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPSL 164 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCce
Confidence 4789999999999999999888775 5555543211 0123566789999994 6999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHHH
Q 019555 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173 (339)
Q Consensus 94 ~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 173 (339)
++..+|+|+..||..|+++|++|.+|++||+|+|.+.. +.... .+
T Consensus 165 ~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~~~~--------------------~~-------------- 209 (421)
T cd00833 165 TVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILS-PDMFV--------------------GF-------------- 209 (421)
T ss_pred eeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCC-HHHHH--------------------HH--------------
Confidence 99999999999999999999999999999999997653 21110 00
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCCCCcc
Q 019555 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSV 253 (339)
Q Consensus 174 ~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~g~l 253 (339)
.. .+. +.++..++|++.. .+|++
T Consensus 210 ---~~------------------------~~~--------------------l~~~~~~~pf~~~----------~~g~~ 232 (421)
T cd00833 210 ---SK------------------------AGM--------------------LSPDGRCRPFDAD----------ADGYV 232 (421)
T ss_pred ---hh------------------------CCC--------------------CCCCCCCCCCCCC----------CCCee
Confidence 00 000 1112223333322 34666
Q ss_pred ccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCcc-----ccchHHHHHHHHHHcCCCCCCCcEEEee
Q 019555 254 TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF-----TTAPSLAIPKAIANAGLEASQIDYYEIN 328 (339)
Q Consensus 254 ~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~-----~~~~~~a~~~al~~agl~~~DId~~~~h 328 (339)
++|||+++||++++.+++.+.+++++|.|++...+..... ..+...+++++|+++|++++|||++++|
T Consensus 233 -------~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~h 305 (421)
T cd00833 233 -------RGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAH 305 (421)
T ss_pred -------eeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEee
Confidence 8999999999999999999988889999999886532111 2234689999999999999999999999
Q ss_pred cccccc
Q 019555 329 EAFSVR 334 (339)
Q Consensus 329 d~F~~~ 334 (339)
...+..
T Consensus 306 gtgt~~ 311 (421)
T cd00833 306 GTGTPL 311 (421)
T ss_pred CCCCCC
Confidence 988754
No 78
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.83 E-value=5.3e-20 Score=177.33 Aligned_cols=204 Identities=22% Similarity=0.170 Sum_probs=146.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC--eEEEEeecCC----------------CC---------CCcHHHHHHHHcCCCCC
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQ--EVFFGNVLSA----------------NL---------GQAPARQAALGAGIPNS 89 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id--~i~~g~~~~~----------------~~---------~~~~~~~ia~~lgl~~~ 89 (339)
..+|+..|+++||+|+|+++.+.+ ++++|..... .. ....+.+++..+|+ .
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl--~ 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGI--R 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCC--C
Confidence 467999999999999998642222 3444432210 00 01256678899999 4
Q ss_pred cceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHH
Q 019555 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (339)
Q Consensus 90 ~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (339)
+|.+++.++|+|+..||..|+++|++|++|.+||+|++.... +.... ++
T Consensus 158 G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~-~~~~~--------------------~~---------- 206 (410)
T PRK07103 158 GEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLS-YWECQ--------------------AL---------- 206 (410)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHHHH--------------------HH----------
Confidence 699999999999999999999999999999999999874322 11110 00
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCC
Q 019555 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE 249 (339)
Q Consensus 170 ~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 249 (339)
.. . +.+... . ...+|...+||++.+ +
T Consensus 207 -~~------~------------------------~~l~~~--------~-----~~~~p~~~~rPfd~~----------~ 232 (410)
T PRK07103 207 -RS------L------------------------GAMGSD--------R-----FADEPEAACRPFDQD----------R 232 (410)
T ss_pred -HH------c------------------------cccccC--------c-----cCCCcccCcCCCCCC----------C
Confidence 00 0 000000 0 001344566777655 5
Q ss_pred CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCc---cccchHHHHHHHHHHcCCCCCCCcEEE
Q 019555 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW---FTTAPSLAIPKAIANAGLEASQIDYYE 326 (339)
Q Consensus 250 ~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~agl~~~DId~~~ 326 (339)
+|++ +||||+++||++.+.|++.+.+++++|.|++...+.... ...+...+++++|+++|++++|||+++
T Consensus 233 dG~v-------~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~ 305 (410)
T PRK07103 233 DGFI-------YGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPEDIDYVN 305 (410)
T ss_pred CCee-------EeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 6777 899999999999999999999999999999998763221 122346899999999999999999999
Q ss_pred eecccccc
Q 019555 327 INEAFSVR 334 (339)
Q Consensus 327 ~hd~F~~~ 334 (339)
.|..++..
T Consensus 306 ~hgtgt~~ 313 (410)
T PRK07103 306 PHGTGSPL 313 (410)
T ss_pred ccCCCCCC
Confidence 99999874
No 79
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.83 E-value=1.6e-19 Score=173.98 Aligned_cols=198 Identities=22% Similarity=0.261 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHHHcCCCC---CccCeEEEEeecCCCC--------------------------CCcHHHHHHHHcCCCCC
Q 019555 39 KLGSIAIECALKRANVKP---LLVQEVFFGNVLSANL--------------------------GQAPARQAALGAGIPNS 89 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~---~~Id~i~~g~~~~~~~--------------------------~~~~~~~ia~~lgl~~~ 89 (339)
.++..++++||+|+|++. +.+ ++++|...+... ...++.+++..+|+ .
T Consensus 85 ~~~l~aa~~AledAg~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~--~ 161 (418)
T PRK07910 85 RMSTVLGRRVWENAGSPEVDTNRL-MVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA--K 161 (418)
T ss_pred HHHHHHHHHHHHHcCCCCCCcccE-EEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC--C
Confidence 478889999999999743 222 356665443210 11255677888888 4
Q ss_pred cceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHH
Q 019555 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (339)
Q Consensus 90 ~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (339)
+|.+++.++|+|++.||..|+++|++|++|.+||+|+|.... +.... +|
T Consensus 162 G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~-~~~~~--------------------~f---------- 210 (418)
T PRK07910 162 AGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIE-AVPIA--------------------GF---------- 210 (418)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHHHH--------------------HH----------
Confidence 799999999999999999999999999999999999998654 22110 00
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCC-ccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCC
Q 019555 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGL-FAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (339)
Q Consensus 170 ~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 248 (339)
.. .+. +.. .-.+++..|||||.+
T Consensus 211 -~~------------------------------~~~~ls~---------------~~~~~~~~~rPFd~~---------- 234 (418)
T PRK07910 211 -AQ------------------------------MRIVMST---------------NNDDPAGACRPFDKD---------- 234 (418)
T ss_pred -Hh------------------------------cCCcccc---------------CCCCCCCCcCCCcCC----------
Confidence 00 000 000 001356678888876
Q ss_pred CCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----CccccchHHHHHHHHHHcCCCCCCCc
Q 019555 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 249 ~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~DId 323 (339)
++|++ ++||++++||++.+.|++++.+++++|.|++...+.. ...+.+..++++++|+++|++++|||
T Consensus 235 ~~G~v-------~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did 307 (418)
T PRK07910 235 RDGFV-------FGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDID 307 (418)
T ss_pred CCCEe-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCC
Confidence 67999 8999999999999999999999999999999987632 22233457899999999999999999
Q ss_pred EEEeeccccc
Q 019555 324 YYEINEAFSV 333 (339)
Q Consensus 324 ~~~~hd~F~~ 333 (339)
+++.|.+.+.
T Consensus 308 ~ie~hgtgt~ 317 (418)
T PRK07910 308 HVNAHATGTS 317 (418)
T ss_pred EEEcCCcCCC
Confidence 9999998874
No 80
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.82 E-value=2.1e-19 Score=172.39 Aligned_cols=197 Identities=27% Similarity=0.310 Sum_probs=150.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCCC------------C--------------CcHHHHHHHHcCCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL------------G--------------QAPARQAALGAGIP 87 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~~------------~--------------~~~~~~ia~~lgl~ 87 (339)
..|+..|+++||+|+|++++.++ ++++|+..+... + ...+.+++..+|+
T Consensus 72 ~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl- 150 (399)
T cd00832 72 TRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM- 150 (399)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC-
Confidence 57889999999999999876554 466665443210 0 1245678889999
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCc
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
.+|+++++++|+|++.||..|+++|++|+ |.+|++|+|...+ |....
T Consensus 151 -~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~-p~~~~------------------------------ 197 (399)
T cd00832 151 -RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALC-PWGWV------------------------------ 197 (399)
T ss_pred -CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccC-HHHHH------------------------------
Confidence 57999999999999999999999999999 9999999998654 32110
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
.... .+.+... .+|...+||||.+
T Consensus 198 -~~~~------------------------------~~~ls~~----------------~~p~~~~rPFd~~--------- 221 (399)
T cd00832 198 -AQLS------------------------------SGRLSTS----------------DDPARAYLPFDAA--------- 221 (399)
T ss_pred -HHHh------------------------------ccccCCC----------------CCCCCCcCCCcCC---------
Confidence 0000 0111100 1234577888776
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCc--cccchHHHHHHHHHHcCCCCCCCcEE
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW--FTTAPSLAIPKAIANAGLEASQIDYY 325 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~--~~~~~~~a~~~al~~agl~~~DId~~ 325 (339)
++|++ +||||+++||++.+.|++.+.+++++|.|++.+.+.... ...+..++++++|+++|++++||||+
T Consensus 222 -~~G~~-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~~ag~~~~~i~~v 293 (399)
T cd00832 222 -AAGYV-------PGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALADAGLTPEDVDVV 293 (399)
T ss_pred -CCCEe-------eeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEE
Confidence 67999 899999999999999999999999999999998764321 23345789999999999999999999
Q ss_pred Eeecccc
Q 019555 326 EINEAFS 332 (339)
Q Consensus 326 ~~hd~F~ 332 (339)
+.|-.-+
T Consensus 294 ~~hgtgt 300 (399)
T cd00832 294 FADAAGV 300 (399)
T ss_pred EeccCcC
Confidence 9997654
No 81
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.82 E-value=3.2e-19 Score=171.32 Aligned_cols=199 Identities=22% Similarity=0.298 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHcCCCC-CccC----eEEEEeecCCC-----------------C---------CCcHHHHHHHHcCC
Q 019555 38 TKLGSIAIECALKRANVKP-LLVQ----EVFFGNVLSAN-----------------L---------GQAPARQAALGAGI 86 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~-~~Id----~i~~g~~~~~~-----------------~---------~~~~~~~ia~~lgl 86 (339)
..|+..|+++||+|+|+.. ..++ ++++|+..+.. . ....+.+++..+|+
T Consensus 74 ~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 153 (405)
T PRK09116 74 SLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGL 153 (405)
T ss_pred HHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCC
Confidence 4688899999999999843 2222 56777644321 0 01256788899999
Q ss_pred CCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCC
Q 019555 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (339)
Q Consensus 87 ~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (339)
.+|.+++.++|+|+..||..|+++|++|++|.+||+|+|..+. .... .| .
T Consensus 154 --~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~--~~~~--------------------~f------~ 203 (405)
T PRK09116 154 --KGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCP--TEAA--------------------VF------D 203 (405)
T ss_pred --CCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcCh--HHHH--------------------HH------H
Confidence 4799999999999999999999999999999999999997542 1110 00 0
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCC
Q 019555 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (339)
Q Consensus 167 ~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 246 (339)
.+.... . -. ..|+..+|||+.+
T Consensus 204 ~l~~~~----------------------------~----~~------------------~~~~~~~rPfd~~-------- 225 (405)
T PRK09116 204 TLFATS----------------------------T----RN------------------DAPELTPRPFDAN-------- 225 (405)
T ss_pred Hhhhhc----------------------------c----CC------------------CCCCCCCCCCcCC--------
Confidence 000000 0 00 1234567777766
Q ss_pred CCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCcc---ccchHHHHHHHHHHcCCCCCCCc
Q 019555 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF---TTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 247 ~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~---~~~~~~a~~~al~~agl~~~DId 323 (339)
++|++ +||||+++||++.+.|++.+.+++++|.|++.+.+..... ......+++++|+++|++++|||
T Consensus 226 --~~G~v-------~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~Agi~p~dId 296 (405)
T PRK09116 226 --RDGLV-------IGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDIG 296 (405)
T ss_pred --CCCEe-------eeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHHHHhCCCHHHcC
Confidence 77999 8999999999999999999999999999999987642211 12346899999999999999999
Q ss_pred EEEeeccccc
Q 019555 324 YYEINEAFSV 333 (339)
Q Consensus 324 ~~~~hd~F~~ 333 (339)
+++.|..-+.
T Consensus 297 ~I~~Hgtgt~ 306 (405)
T PRK09116 297 YVNAHGTATD 306 (405)
T ss_pred EEECcCccCC
Confidence 9999997664
No 82
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.82 E-value=3e-19 Score=172.68 Aligned_cols=164 Identities=23% Similarity=0.293 Sum_probs=123.9
Q ss_pred cHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccc
Q 019555 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGM 154 (339)
Q Consensus 75 ~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 154 (339)
..+.+++..+|+ .++.++++.+|+|+..||..|+++|++|++|.+||+|+|.... +....
T Consensus 153 ~~a~~i~~~~gl--~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~-~~~~~----------------- 212 (425)
T PRK06501 153 SIADRLADRFGT--RGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVS-AEALI----------------- 212 (425)
T ss_pred HHHHHHHHHhCC--CCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHH-----------------
Confidence 356778889999 4799999999999999999999999999999999999995432 21110
Q ss_pred cccccccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc
Q 019555 155 LKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK 234 (339)
Q Consensus 155 ~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~ 234 (339)
.+... ..+.. ....++..+||
T Consensus 213 ---------------------------------~~~~~-----------~~ls~---------------~~~~~~~~~rp 233 (425)
T PRK06501 213 ---------------------------------RFSLL-----------SALST---------------QNDPPEKASKP 233 (425)
T ss_pred ---------------------------------HHHHh-----------hcccc---------------CCCCCCcccCC
Confidence 00000 00000 00123456677
Q ss_pred cCHHHHhcCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCc-----cccchHHHHH
Q 019555 235 FDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIP 309 (339)
Q Consensus 235 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~ 309 (339)
|+.+ ++|++ +||||+++||++.+.+++.+.+++++|.|++...+.... .+.....+++
T Consensus 234 fd~~----------r~G~v-------~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~ 296 (425)
T PRK06501 234 FSKD----------RDGFV-------MAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIR 296 (425)
T ss_pred CCCC----------CCCee-------eeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHH
Confidence 7665 56877 899999999999999999999999999999987653211 1223468999
Q ss_pred HHHHHcCCCCCCCcEEEeecccccc
Q 019555 310 KAIANAGLEASQIDYYEINEAFSVR 334 (339)
Q Consensus 310 ~al~~agl~~~DId~~~~hd~F~~~ 334 (339)
++|+++|++++|||+++.|...+..
T Consensus 297 ~AL~~agi~p~dId~i~~Hgtgt~~ 321 (425)
T PRK06501 297 AALADAGLTPEQIDYINAHGTSTPE 321 (425)
T ss_pred HHHHHcCCCHHHcCEEEecCccCcc
Confidence 9999999999999999999998764
No 83
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.82 E-value=5.2e-19 Score=170.21 Aligned_cols=199 Identities=25% Similarity=0.288 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCe----EEEEeecCCC--------------------------CCCcHHHHHHHHcCC
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~----i~~g~~~~~~--------------------------~~~~~~~~ia~~lgl 86 (339)
..+|+..|+++||+|+|+++.+++. +++|...+.. ....++.+++..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 3578999999999999999887774 4444322110 011466788999999
Q ss_pred CCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCC
Q 019555 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (339)
Q Consensus 87 ~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (339)
. ++.+++.++|+|+..||..|+++|++|++|.+||+|+|.... +....
T Consensus 152 ~--Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~-~~~~~----------------------------- 199 (406)
T PRK08439 152 K--GPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAIC-PVGIG----------------------------- 199 (406)
T ss_pred C--CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccC-HHHHH-----------------------------
Confidence 4 699999999999999999999999999999999999997543 22110
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCC
Q 019555 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (339)
Q Consensus 167 ~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 246 (339)
+... .+.+.. .-.+|+..+|||+.+
T Consensus 200 --~f~~------------------------------~~~ls~---------------~~~~p~~~~rpfd~~-------- 224 (406)
T PRK08439 200 --GFAA------------------------------MKALST---------------RNDDPKKASRPFDKD-------- 224 (406)
T ss_pred --HHHH------------------------------hCcccc---------------CCCCCccCcCCccCC--------
Confidence 0000 000000 001345567777766
Q ss_pred CCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccc---cchHHHHHHHHHHcCCCCCCCc
Q 019555 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT---TAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 247 ~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~---~~~~~a~~~al~~agl~~~DId 323 (339)
++|++ ++|||+++||++.+.|++.+.+++++|.|++...+...... .+..++++++|+++|+ +|||
T Consensus 225 --~~G~v-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~al~~ag~--~~i~ 293 (406)
T PRK08439 225 --RDGFV-------MGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAALEMAGN--PKID 293 (406)
T ss_pred --CCcEE-------eeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHHHHHcCC--CccC
Confidence 67888 89999999999999999999999999999998765321111 2346899999999999 8999
Q ss_pred EEEeeccccc
Q 019555 324 YYEINEAFSV 333 (339)
Q Consensus 324 ~~~~hd~F~~ 333 (339)
|++.|..-+.
T Consensus 294 ~v~~hgtgt~ 303 (406)
T PRK08439 294 YINAHGTSTP 303 (406)
T ss_pred EEEccCCcCC
Confidence 9999987654
No 84
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.79 E-value=2.5e-18 Score=164.16 Aligned_cols=194 Identities=20% Similarity=0.172 Sum_probs=138.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCCC--------------------------------------CC
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL--------------------------------------GQ 74 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~~--------------------------------------~~ 74 (339)
...|+..|+++||+|+|++....+ ++++|+..+... ..
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 345888999999999999653322 356666544310 01
Q ss_pred cHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccc
Q 019555 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGM 154 (339)
Q Consensus 75 ~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 154 (339)
..+.+++..+|+ .+|.+++.++|+|+..||..|+++|++|++|.+||+|+|.... +....
T Consensus 153 ~~a~~is~~~gl--~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~-~~~~~----------------- 212 (398)
T PRK06519 153 LLAGNISIVHKV--TGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAER-PDMLL----------------- 212 (398)
T ss_pred HHHHHHHHHhCC--CCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHH-----------------
Confidence 356678899999 5799999999999999999999999999999999999997544 22110
Q ss_pred cccccccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc
Q 019555 155 LKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK 234 (339)
Q Consensus 155 ~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~ 234 (339)
.+ . . .+.+. ...++|
T Consensus 213 ---~~---------~--~------------------------------~~~ls---------------------~~~~~p 227 (398)
T PRK06519 213 ---LY---------E--L------------------------------GGLLL---------------------KGGWAP 227 (398)
T ss_pred ---HH---------H--H------------------------------cCccC---------------------CCCCCc
Confidence 00 0 0 00000 001111
Q ss_pred -cCHHHHhcCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHH
Q 019555 235 -FDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIA 313 (339)
Q Consensus 235 -~~~~~~~~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~ 313 (339)
++ .+| -+++|++ +||||+++||++.+.|++++.+++++|.|++.... +. ...+..++++++|+
T Consensus 228 ~~d------~~~-~~r~G~v-------~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~-~~-~~~~~~~am~~AL~ 291 (398)
T PRK06519 228 VWS------RGG-EDGGGFI-------LGSGGAFLVLESREHAEARGARPYARISGVESDRA-RR-APGDLEASLERLLK 291 (398)
T ss_pred hhc------cCc-cCCCCee-------eeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC-CC-ChHHHHHHHHHHHH
Confidence 11 011 1156888 89999999999999999999999999999964322 21 22345789999999
Q ss_pred HcCCCCCCCcEEEeecccc
Q 019555 314 NAGLEASQIDYYEINEAFS 332 (339)
Q Consensus 314 ~agl~~~DId~~~~hd~F~ 332 (339)
+||+ ++||||++.|-.=|
T Consensus 292 ~Agl-~~~IdyI~ahgtgT 309 (398)
T PRK06519 292 PAGG-LAAPTAVISGATGA 309 (398)
T ss_pred HCCC-cccCCEEEeCCCCC
Confidence 9999 89999999997644
No 85
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.79 E-value=2.9e-18 Score=164.53 Aligned_cols=196 Identities=22% Similarity=0.252 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCC-------------C--------------CCcHHHHHHHHcCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-------------L--------------GQAPARQAALGAGI 86 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~-------------~--------------~~~~~~~ia~~lgl 86 (339)
..++..|+++||+|+|+++.+.+ ++++|...+.. . ...++.+++..+|+
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l 151 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKI 151 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCC
Confidence 46788999999999999765443 35566532221 0 01366788999999
Q ss_pred CCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCC
Q 019555 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (339)
Q Consensus 87 ~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (339)
.+|.++++++|+|+..||..|+++|++|++|.+||+|+|..+. +...
T Consensus 152 --~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~-~~~~------------------------------ 198 (406)
T PRK07967 152 --KGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDW-EMSC------------------------------ 198 (406)
T ss_pred --CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCh-HHHH------------------------------
Confidence 5799999999999999999999999999999999999997543 1100
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCC
Q 019555 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (339)
Q Consensus 167 ~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 246 (339)
+..+. +.+.. . .-.+|+..||||+.+
T Consensus 199 --~f~~~------------------------------~~ls~-------~-------~~~~p~~~~rPFd~~-------- 224 (406)
T PRK07967 199 --LFDAM------------------------------GALST-------K-------YNDTPEKASRAYDAN-------- 224 (406)
T ss_pred --HHHHh------------------------------hhhcc-------C-------CCCCCCcCCcCCcCC--------
Confidence 00000 00000 0 002355678888877
Q ss_pred CCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCc---cccchHHHHHHHHHHcCCCCCCCc
Q 019555 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW---FTTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 247 ~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~agl~~~DId 323 (339)
++|++ ++|||+++||++.+.|++++.+++++|.|++.+.+.... .+.+..++++++|+.++ + |||
T Consensus 225 --r~G~v-------~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~Al~~~~--~-~Id 292 (406)
T PRK07967 225 --RDGFV-------IAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMALATVD--T-PID 292 (406)
T ss_pred --CCcee-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHhCCC--C-Ccc
Confidence 77999 899999999999999999999999999999998764321 12334689999998654 4 999
Q ss_pred EEEeecccc
Q 019555 324 YYEINEAFS 332 (339)
Q Consensus 324 ~~~~hd~F~ 332 (339)
|++.|-.=+
T Consensus 293 yi~aHgtGT 301 (406)
T PRK07967 293 YINTHGTST 301 (406)
T ss_pred EEEcCCCCC
Confidence 999997543
No 86
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.75 E-value=1.2e-17 Score=155.85 Aligned_cols=109 Identities=19% Similarity=0.159 Sum_probs=96.1
Q ss_pred cCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCcc
Q 019555 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (339)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas 101 (339)
++++.++....++.+..+|+.+|++++|+++|+++++||.+++++..+....+..+..++..+|+. ..+.+++..+|++
T Consensus 37 ~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~~~Cas 115 (319)
T PRK09352 37 RTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLSAACSG 115 (319)
T ss_pred hcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeeccccchh
Confidence 577766555567889999999999999999999999999999988776554556778899999995 5799999999999
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEccccccC
Q 019555 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
+..||..|+++|++|.++++||+|+|.++.
T Consensus 116 g~~al~~A~~~i~~g~~~~vLvv~~e~~s~ 145 (319)
T PRK09352 116 FVYALSTADQFIRSGAYKNVLVIGAEKLSR 145 (319)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEehhhcc
Confidence 999999999999999999999999999764
No 87
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.75 E-value=2.5e-17 Score=154.48 Aligned_cols=98 Identities=17% Similarity=0.137 Sum_probs=88.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCC-CcceeeecccCccHHHHHHHHHHH
Q 019555 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN-SVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 34 ~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~-~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
+.++.+|+.+|+++||+++|+++++||.+++++.++....+..+..++..||+++ .+++++++.+|+++..+|..|..+
T Consensus 49 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~~ 128 (329)
T PRK07204 49 GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYA 128 (329)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999887766556777889999999974 368999999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|.++.|||+++|..+.
T Consensus 129 l~~g~~~~~Lvv~~e~~s~ 147 (329)
T PRK07204 129 IECGRYKRVLIISSEISSV 147 (329)
T ss_pred HHCCCCCEEEEEEeccccC
Confidence 9999999999999998764
No 88
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.75 E-value=2.2e-17 Score=155.59 Aligned_cols=190 Identities=19% Similarity=0.166 Sum_probs=138.2
Q ss_pred CCHHHHHHHHHHHHHHHcC-CCCCccCeEEEEeec-----CCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRAN-VKPLLVQEVFFGNVL-----SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVML 108 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dag-l~~~~Id~i~~g~~~-----~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~ 108 (339)
.+..+|+.+|++++|++++ +++++||.+++.... .....+.....++.++|+....+.+++..+|+|+..||..
T Consensus 63 ~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~~ 142 (348)
T PRK06147 63 ERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIARGRVSGAVALAQ 142 (348)
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccccchHHHHHHHH
Confidence 4678999999999999999 789999988864321 1111223456788889985456789999999999999999
Q ss_pred HHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHHHHHHHHcCCCHHHHHH
Q 019555 109 AAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188 (339)
Q Consensus 109 A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~ 188 (339)
|+++|++|++|.+||+|+|.++. +.... .+ ..
T Consensus 143 A~~~i~~G~~~~~lvgg~d~~~~-~~~~~--------------------~~-----------~~---------------- 174 (348)
T PRK06147 143 ARRLIAAGGCPRVLVAGVDSLLT-GPTLA--------------------HY-----------EA---------------- 174 (348)
T ss_pred HHHHHHcCCCCEEEEEeeccccC-HHHHH--------------------HH-----------HH----------------
Confidence 99999999999999999998775 21110 00 00
Q ss_pred HHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCCCCccccccCCcccccceeE
Q 019555 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAAL 268 (339)
Q Consensus 189 ~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~g~l~~~~~~~~~DGAaAv 268 (339)
. ..++. ++ .++|++ +||||+++
T Consensus 175 ------------~-~~l~~--------------------~~------------------~~~G~v-------~GEGA~a~ 196 (348)
T PRK06147 175 ------------R-DRLLT--------------------SQ------------------NSNGFI-------PGEAAAAV 196 (348)
T ss_pred ------------h-hccCC--------------------CC------------------CCCcee-------eeceEEEE
Confidence 0 00000 00 034788 89999999
Q ss_pred EEeCHHHHHhcCCCccEEEEeeEEeeeCC------CccccchHHHHHHHHHHcCCCCCCCcEEEeecccc
Q 019555 269 VLVSGVKALELGLQVIAKIRGFADAAQAP------EWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFS 332 (339)
Q Consensus 269 iL~s~~~a~~~~~~~~~~i~g~~~~~~~~------~~~~~~~~~a~~~al~~agl~~~DId~~~~hd~F~ 332 (339)
||++.+.+++.+.++++ .|++...+.. ...+.+..++++++|+++|++++|||++..|-.-+
T Consensus 197 vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt 264 (348)
T PRK06147 197 LLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGE 264 (348)
T ss_pred EEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCC
Confidence 99999999888877665 4554443321 11233457999999999999999999999987643
No 89
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.74 E-value=1.5e-17 Score=186.10 Aligned_cols=191 Identities=16% Similarity=0.234 Sum_probs=149.1
Q ss_pred HHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCC-------------------------------------------
Q 019555 39 KLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN------------------------------------------- 71 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~------------------------------------------- 71 (339)
.|+.+++++||+|||+..+ .+ ++++|...+..
T Consensus 95 rl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (2582)
T TIGR02813 95 LLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHWE 173 (2582)
T ss_pred HHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhcccccccC
Confidence 4789999999999998543 33 56777543210
Q ss_pred -------CCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCC
Q 019555 72 -------LGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSR 144 (339)
Q Consensus 72 -------~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~ 144 (339)
....++.+|+..+|+ ++|+++++++|+|++.||+.|++.|++|++|.+|++|++.... |..+.
T Consensus 174 ~~~~~g~~~n~~A~RIS~~f~L--~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~-p~~~~------- 243 (2582)
T TIGR02813 174 ENSFPGSLGNVISGRIANRFDL--GGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNS-PFMYM------- 243 (2582)
T ss_pred ccccccccccHHHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCC-HHHHH-------
Confidence 001356788999999 5799999999999999999999999999999999999987654 32111
Q ss_pred CCCccccccccccccccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcce
Q 019555 145 LGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFI 224 (339)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~ 224 (339)
+| .. . .
T Consensus 244 -------------~f-----------s~------------------------------~--------------------~ 249 (2582)
T TIGR02813 244 -------------SF-----------SK------------------------------T--------------------P 249 (2582)
T ss_pred -------------HH-----------Hh------------------------------c--------------------c
Confidence 00 00 0 1
Q ss_pred EeecCCCCcccCHHHHhcCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccc---
Q 019555 225 IVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT--- 301 (339)
Q Consensus 225 ~~~~~~~~r~~~~~~~~~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~--- 301 (339)
.+++++.|||||.+ .+|++ +|||++++||.+.+.|++.|.++++.|.|++.++++...-.
T Consensus 250 ~lS~~g~crpFD~~----------adG~v-------~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP 312 (2582)
T TIGR02813 250 AFTTNEDIQPFDID----------SKGMM-------IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAP 312 (2582)
T ss_pred CcCCCCCccCCCCC----------CCccc-------ccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCC
Confidence 14556778888876 67999 79999999999999999999999999999999988642211
Q ss_pred --cchHHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 302 --TAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 302 --~~~~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
.+..++++++|++||++++||+|||.|..=
T Consensus 313 ~~~gq~~~i~~Al~~Agi~p~~I~yIeaHGTG 344 (2582)
T TIGR02813 313 RPEGQAKALKRAYDDAGFAPHTCGLIEAHGTG 344 (2582)
T ss_pred CHHHHHHHHHHHHHHcCCCHHHCCEEEecCCC
Confidence 223689999999999999999999999743
No 90
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=99.74 E-value=2.4e-17 Score=155.39 Aligned_cols=98 Identities=18% Similarity=0.257 Sum_probs=88.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
+++++.+|+.+|+++||+++|+++++||.+++++..+....+..+..++..||+.++.+.+++..+|+++..+|..|..+
T Consensus 46 ~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~~ 125 (345)
T TIGR00748 46 LDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMGL 125 (345)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999887666555666778999999975678999999999999999999999
Q ss_pred HHcCCCceEEEEcccccc
Q 019555 113 IQLGINDIVVAGGMESMS 130 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s 130 (339)
|++|.++++||+++|.++
T Consensus 126 i~sg~~~~vLVv~~d~~~ 143 (345)
T TIGR00748 126 VASGMIKYGLAIGADTAQ 143 (345)
T ss_pred HHcCCCCEEEEEEEeecc
Confidence 999999999999999875
No 91
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=99.74 E-value=3.4e-17 Score=153.37 Aligned_cols=109 Identities=28% Similarity=0.286 Sum_probs=95.0
Q ss_pred ccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCc
Q 019555 21 ARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCS 100 (339)
Q Consensus 21 ~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~ca 100 (339)
-+|++.++....++.+..+|+.+|+++||+++|+++++||.++++++++.... ..+..++..||+. ..+.++++.+|+
T Consensus 35 ~~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~-~~~~~v~~~Lg~~-~~~~~~v~~~Ca 112 (326)
T CHL00203 35 TRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLF-GSASQLQAEIGAT-RAVAFDITAACS 112 (326)
T ss_pred eccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCC-chHHHHHHHhCCC-CCceeeecccch
Confidence 56778776666678899999999999999999999999999999987665332 2356788999997 578999999999
Q ss_pred cHHHHHHHHHHHHHcCCCceEEEEccccccC
Q 019555 101 SGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 101 s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
|+..+|..|+.+|++|.++++||+|+|.++.
T Consensus 113 sg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~ 143 (326)
T CHL00203 113 GFILALVTATQFIQNGSYKNILVVGADTLSK 143 (326)
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEEEehhhhC
Confidence 9999999999999999999999999999875
No 92
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.74 E-value=3.1e-17 Score=156.32 Aligned_cols=94 Identities=23% Similarity=0.165 Sum_probs=83.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHHc
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQL 115 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~s 115 (339)
+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..||++ .+.++++.+|+|+..+|..|+.+|++
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~~aCasg~~al~~A~~~i~~ 171 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMNVACSSATFGIQTAANAIRS 171 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEecchhHHHHHHHHHHHHHHHc
Confidence 3468999999999999999999999999987766554566677899999995 58999999999999999999999999
Q ss_pred CCCceEEEEccccccC
Q 019555 116 GINDIVVAGGMESMSN 131 (339)
Q Consensus 116 G~~~~vLv~g~e~~s~ 131 (339)
|.++.|||+|+|.++.
T Consensus 172 g~~~~vLvv~~e~~s~ 187 (372)
T PRK07515 172 GSARRVLVVNPEICSG 187 (372)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999998764
No 93
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.74 E-value=3.1e-17 Score=154.37 Aligned_cols=99 Identities=21% Similarity=0.200 Sum_probs=91.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
++.++.+|+.+|+++||+++|+++++||.+++++..++...+..+..++..||+++..+.+++..+|+++..||..|..+
T Consensus 57 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~~~al~~A~~~ 136 (338)
T PRK09258 57 EGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSNACLGFLNGMLDAANM 136 (338)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhhhhHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999988776667788899999999975678999999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|.++.|||+++|..+.
T Consensus 137 i~~g~~~~~Lvv~~e~~s~ 155 (338)
T PRK09258 137 IELGQIDYALVVSGESARE 155 (338)
T ss_pred HHcCCCCEEEEEEecccch
Confidence 9999999999999998765
No 94
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.74 E-value=2.9e-17 Score=153.70 Aligned_cols=98 Identities=23% Similarity=0.246 Sum_probs=89.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
++.++.+|+.+|+++||+++|+++++||.++++++.++...+..+.+++..||++ ..+.+.++.+|+++..+|..|..+
T Consensus 49 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~~~C~~~~~al~~A~~~ 127 (325)
T PRK12879 49 VEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDINAACAGFLYGLETANGL 127 (325)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEECccchHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988776666677888999999997 478999999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|.++.|||+++|.++.
T Consensus 128 l~~g~~~~~Lvv~~e~~s~ 146 (325)
T PRK12879 128 ITSGLYKKVLVIGAERLSK 146 (325)
T ss_pred HHcCCCCEEEEEEehhhcC
Confidence 9999999999999998764
No 95
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.74 E-value=3.1e-17 Score=148.89 Aligned_cols=92 Identities=28% Similarity=0.298 Sum_probs=80.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHH
Q 019555 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSI 113 (339)
Q Consensus 34 ~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I 113 (339)
+++..+|+.+|+++||+++|+++++||.+++|.... ....+..++..||+ |.+.++.+|+|+..+|..|+.+|
T Consensus 47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~---Q~~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~lI 119 (327)
T TIGR02845 47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDLLN---QIITANFVARDLGI----PFLGLYGACSTSMETLALGAMLV 119 (327)
T ss_pred chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC---cccHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHHHH
Confidence 457788999999999999999999999999986422 23457788888987 56999999999999999999999
Q ss_pred HcCCCceEEEEccccccCC
Q 019555 114 QLGINDIVVAGGMESMSNA 132 (339)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~ 132 (339)
++|.+++|||++.|..+++
T Consensus 120 ~SG~ad~VLVV~Ssh~S~A 138 (327)
T TIGR02845 120 DGGFADRVLAATSSHYATA 138 (327)
T ss_pred hCCCCCEEEEEEecccchh
Confidence 9999999999999988863
No 96
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.73 E-value=4.5e-17 Score=155.38 Aligned_cols=96 Identities=23% Similarity=0.204 Sum_probs=86.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~ 114 (339)
.++.+|+.+|+++||+++|+++++||.+++++..++...+..+..++..||++ ..+.++++.+|+|+..+|..|..+|+
T Consensus 61 ~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~i~ 139 (378)
T PRK06816 61 HSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSAGVCAAGMMALKYAYLSVK 139 (378)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeecCcCHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999998777544455557788899997 47899999999999999999999999
Q ss_pred cCCCceEEEEccccccC
Q 019555 115 LGINDIVVAGGMESMSN 131 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (339)
+|.+++|||+|+|.+|.
T Consensus 140 sg~~~~vLvv~~E~~s~ 156 (378)
T PRK06816 140 AGESRNAVATASELASR 156 (378)
T ss_pred CCCCCEEEEEeEccchh
Confidence 99999999999999886
No 97
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.73 E-value=4.6e-17 Score=153.69 Aligned_cols=98 Identities=12% Similarity=0.162 Sum_probs=91.9
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
++.+..+|+.+|+++||+++|+++++||.+++++++++...+..+..++.+||++++++.+++..+|+++..+|..|..+
T Consensus 56 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~~ 135 (353)
T PRK12880 56 ENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSL 135 (353)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999988888999999999999976788999999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|..+ +||++.|..|.
T Consensus 136 i~~~~~~-~LVv~~e~~S~ 153 (353)
T PRK12880 136 IQSGLGK-ILLICGDTLSK 153 (353)
T ss_pred HHcCCCC-EEEEEehhhhc
Confidence 9999999 99999998765
No 98
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=99.73 E-value=3.2e-17 Score=152.99 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=95.1
Q ss_pred cCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCcc
Q 019555 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (339)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas 101 (339)
++++.++....++.++.+|+.+|+++||+++|+++++||.+++++..+....+..+..++..||++ +.+.+++..+|++
T Consensus 36 ~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~~~C~s 114 (318)
T TIGR00747 36 RTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLSAACAG 114 (318)
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehhhhhHH
Confidence 355555444556789999999999999999999999999999988777655566778899999997 4789999999999
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEccccccC
Q 019555 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
+..+|..|+.+|++|.++++||+++|.++.
T Consensus 115 ~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~ 144 (318)
T TIGR00747 115 FIYALSVAKQYIESGKYKTVLVVGAEKLSS 144 (318)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEehhhcC
Confidence 999999999999999999999999998764
No 99
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.72 E-value=9.5e-17 Score=149.77 Aligned_cols=99 Identities=21% Similarity=0.167 Sum_probs=90.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHH
Q 019555 32 LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 32 ~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~ 111 (339)
.++.++.+|+.+|+++||+++|+++++||.+++++.++....+..+..++..||++ ..+.++++.+|+++..+|..|..
T Consensus 45 ~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~ 123 (320)
T cd00830 45 DPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDINAACSGFLYGLSTAAG 123 (320)
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeeccccchHHHHHHHHHHH
Confidence 34589999999999999999999999999999988776655567788999999997 68999999999999999999999
Q ss_pred HHHcCCCceEEEEccccccC
Q 019555 112 SIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 112 ~I~sG~~~~vLv~g~e~~s~ 131 (339)
+|++|.++++||+++|.++.
T Consensus 124 ~i~~g~~~~vLvv~~e~~s~ 143 (320)
T cd00830 124 LIRSGGAKNVLVVGAETLSR 143 (320)
T ss_pred HHHcCCCCEEEEEEehhhcc
Confidence 99999999999999999775
No 100
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.72 E-value=6.6e-17 Score=147.09 Aligned_cols=92 Identities=27% Similarity=0.306 Sum_probs=80.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHH
Q 019555 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSI 113 (339)
Q Consensus 34 ~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I 113 (339)
+++..+|+.+|+++||+++|+++++||.+++|.... ....+..++..||+ |.+.+..+|+++..+|..|+.+|
T Consensus 53 EkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~---Q~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~lI 125 (337)
T PRK08304 53 EKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN---QIISANFAARELGI----PFLGLYGACSTMMESLALGSMLI 125 (337)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC---CcchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHHH
Confidence 467789999999999999999999999999997532 22456677788876 78999999999999999999999
Q ss_pred HcCCCceEEEEccccccCC
Q 019555 114 QLGINDIVVAGGMESMSNA 132 (339)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~ 132 (339)
++|.+++|||++.+..+++
T Consensus 126 ~SG~ad~VLVV~Ssh~s~a 144 (337)
T PRK08304 126 DGGFADRVLAATSSHFATA 144 (337)
T ss_pred hcCCCCEEEEEEcchhhhh
Confidence 9999999999999988874
No 101
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=99.71 E-value=1.1e-16 Score=152.82 Aligned_cols=107 Identities=22% Similarity=0.170 Sum_probs=91.2
Q ss_pred CcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccH
Q 019555 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (339)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~ 102 (339)
|++.++.-..++.++.+|+.+|+++||+++|+++++||.+++++.++.... ..+..++..||++ +.+.++++.+|+++
T Consensus 82 tGi~~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~-~~a~~v~~~LG~~-~~~~~dv~~~Ca~~ 159 (379)
T PLN02326 82 TGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLF-GSAPQVQAALGCT-NALAFDLTAACSGF 159 (379)
T ss_pred cCcceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccC-cHHHHHHHHhCCC-CCceeeccccchHH
Confidence 444443333456889999999999999999999999999999887665432 3567899999997 68999999999999
Q ss_pred HHHHHHHHHHHHcCCCceEEEEccccccC
Q 019555 103 MKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
..+|..|.++|++|.++.+||+|.|.++.
T Consensus 160 ~~aL~~A~~~l~~g~~~~vLVv~~e~~s~ 188 (379)
T PLN02326 160 VLGLVTAARFIRGGGYKNVLVIGADALSR 188 (379)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEechhcC
Confidence 99999999999999999999999998774
No 102
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.71 E-value=2.6e-16 Score=166.17 Aligned_cols=211 Identities=27% Similarity=0.287 Sum_probs=163.7
Q ss_pred EeeccCcccccCCCCCCCCHH---------HHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCCCCC----------
Q 019555 18 VGVARTPMGGFLGSLSSVSAT---------KLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANLGQ---------- 74 (339)
Q Consensus 18 vG~~~t~~~~~~~~~~~~~~~---------~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~~~~---------- 74 (339)
.|+....+.++...+-+.++. .|..+.+.+||+|||+.+..+. +|+.|....++...
T Consensus 63 ~ggfl~~~~~FD~~fFgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~ 142 (1061)
T COG3321 63 WGGFLDDVDDFDALFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPE 142 (1061)
T ss_pred cccccCCccccCHHHcCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccc
Confidence 455555444444334444443 3999999999999999998877 57777666554211
Q ss_pred ---------cHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCC
Q 019555 75 ---------APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRL 145 (339)
Q Consensus 75 ---------~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~ 145 (339)
..+.+++..|++ .+|.+.|+++|+|++.|+++|++.|++|++|.+|++|+.........+.
T Consensus 143 ~~~~g~~~~~~a~Risy~l~l--~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~-------- 212 (1061)
T COG3321 143 YAITGNSSSVAAGRISYVLGL--SGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYL-------- 212 (1061)
T ss_pred eecccchhhHHHHHHHHHhcC--CCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceee--------
Confidence 266788888999 5799999999999999999999999999999999999987765211110
Q ss_pred CCccccccccccccccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceE
Q 019555 146 GHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFII 225 (339)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~ 225 (339)
+ .+ -..
T Consensus 213 -------------~-----------------------------------------------~~--------------~g~ 218 (1061)
T COG3321 213 -------------F-----------------------------------------------SA--------------GGM 218 (1061)
T ss_pred -------------e-----------------------------------------------ec--------------ccC
Confidence 0 00 022
Q ss_pred eecCCCCcccCHHHHhcCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccc----
Q 019555 226 VDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT---- 301 (339)
Q Consensus 226 ~~~~~~~r~~~~~~~~~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~---- 301 (339)
++++..|+.|+.+ .+|++ .|+|+++|+|...+.|.+.|+++++.|.|.+.+.+....-.
T Consensus 219 ls~~g~c~~fd~~----------adG~v-------~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~ 281 (1061)
T COG3321 219 LSPDGRCKAFDAD----------ADGYV-------RGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPN 281 (1061)
T ss_pred cCCCCcceecccC----------CCCEE-------EeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCC
Confidence 5677788877766 66999 79999999999999999999999999999999988643311
Q ss_pred -cchHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 302 -TAPSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 302 -~~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
.+-...++++|+.+|+++++|+|+|.|-
T Consensus 282 ~~aQ~~v~~~al~~a~i~p~tv~yvEaHg 310 (1061)
T COG3321 282 LEAQADVIREALADAGIDPATVQYVEAHG 310 (1061)
T ss_pred HHHHHHHHHHHHHhcCCCcccCcEEEecC
Confidence 2236899999999999999999999997
No 103
>PRK04262 hypothetical protein; Provisional
Probab=99.71 E-value=1.7e-16 Score=149.87 Aligned_cols=96 Identities=20% Similarity=0.279 Sum_probs=87.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
++.+..+|+.+|+++||+++|+++++||.+++++.++....+..+..++..||+++..+.++++.+|+++..+|..|..+
T Consensus 47 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~~ 126 (347)
T PRK04262 47 PDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMGL 126 (347)
T ss_pred CCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999887776555666778999999975578899999999999999999999
Q ss_pred HHcCCCceEEEEcccc
Q 019555 113 IQLGINDIVVAGGMES 128 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~ 128 (339)
|++|.++++||++.|.
T Consensus 127 i~sg~~~~aLVv~~e~ 142 (347)
T PRK04262 127 VKSGMIKYALAIGADT 142 (347)
T ss_pred HHcCCCCEEEEEEEee
Confidence 9999999999999997
No 104
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=99.70 E-value=1.5e-16 Score=148.70 Aligned_cols=108 Identities=19% Similarity=0.234 Sum_probs=97.2
Q ss_pred EeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecc
Q 019555 18 VGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK 97 (339)
Q Consensus 18 vG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~ 97 (339)
+|+.+..|... +.+..+|+.+|++++|+++|+++++||.+++++..+....+..+..++..+|++ ..+.++++.
T Consensus 34 ~gi~~r~~~~~-----~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~~ 107 (324)
T cd00827 34 TGIGQRHMAGD-----DEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLKQ 107 (324)
T ss_pred eecceeEecCC-----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehhh
Confidence 77777777654 478999999999999999999999999999998777655667888999999997 689999999
Q ss_pred cCccHHHHHHHHHHHHHcCCCceEEEEccccccC
Q 019555 98 VCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 98 ~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
+|+|+..||..|+.+|++|.++++||+++|.++.
T Consensus 108 ~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~ 141 (324)
T cd00827 108 ACYGGTAALQLAANLVESGPWRYALVVASDIASY 141 (324)
T ss_pred hhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhh
Confidence 9999999999999999999999999999999875
No 105
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.68 E-value=4.7e-16 Score=145.64 Aligned_cols=97 Identities=15% Similarity=0.133 Sum_probs=88.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
++.++.+|+.+|+++||+++|+++++||.+++++++++...+..+.+++.+||++ ..+++++..+|+++..+|..|..+
T Consensus 48 ~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~~C~g~~~aL~~A~~~ 126 (326)
T PRK05963 48 PDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAGACAGFLYALVLADGF 126 (326)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccchhhHHHHHHHHHHHH
Confidence 4679999999999999999999999999999998887766677888999999997 478999999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|. +.+||+++|..+.
T Consensus 127 l~~~~-~~aLVv~~d~~s~ 144 (326)
T PRK05963 127 VRAQG-KPVLVVAANILSR 144 (326)
T ss_pred HHcCC-CeEEEEEechhhc
Confidence 99985 9999999998663
No 106
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=99.68 E-value=1e-15 Score=145.97 Aligned_cols=110 Identities=15% Similarity=0.138 Sum_probs=96.6
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceee
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT 94 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~ 94 (339)
.++.|.|++.+.... ++++..+|+.+|+++||+++ ++++||.+++++.++....+..+..++..||+++.++.+.
T Consensus 30 ~~~~g~G~~~~~~~~---~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~d 104 (379)
T TIGR01835 30 KFHIGIGQKKMAVPP---IDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFE 104 (379)
T ss_pred HHHhhcCceEEeeCC---CCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEE
Confidence 456788877766543 35778999999999999999 7999999999998887666788999999999976689999
Q ss_pred ecccCccHHHHHHHHHHHHHcCCCceEEEEccccc
Q 019555 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESM 129 (339)
Q Consensus 95 v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~ 129 (339)
+..+|+++..||..|..+|++|..+.+||+++|..
T Consensus 105 v~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a 139 (379)
T TIGR01835 105 LKQACYGATAALQMAKGHVALSPDRKVLVIASDIA 139 (379)
T ss_pred eccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehh
Confidence 99999999999999999999999999999999873
No 107
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=99.65 E-value=8.4e-16 Score=145.93 Aligned_cols=95 Identities=20% Similarity=0.166 Sum_probs=87.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec-ccCccHHHHHHHHHHHHH
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~-~~cas~~~al~~A~~~I~ 114 (339)
++.+|+.+|+++||+++|+++++||.++++++++ ...+..+..|+.+||+++.++.+.+. .+|+++..+|..|..+|+
T Consensus 84 ~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~ 162 (361)
T cd00831 84 EARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLE 162 (361)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHHH
Confidence 6799999999999999999999999999988765 45677888999999998668899998 899999999999999999
Q ss_pred cCCCceEEEEccccccC
Q 019555 115 LGINDIVVAGGMESMSN 131 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (339)
+|..+.|||+++|..+.
T Consensus 163 ~~~~~~aLvv~~e~~s~ 179 (361)
T cd00831 163 ANPGARVLVVSTELCSL 179 (361)
T ss_pred HCCCCEEEEEEeecccc
Confidence 99999999999998775
No 108
>PRK06840 hypothetical protein; Validated
Probab=99.65 E-value=3e-15 Score=140.96 Aligned_cols=98 Identities=19% Similarity=0.108 Sum_probs=85.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEee-cCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~-~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~ 111 (339)
++.+..+|+.+|+++||+++|+++++||.++++.+ .++...+..+.+++..||++ ..+.+.+..+|+++..+|..|..
T Consensus 49 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~~~C~~~~~al~~A~~ 127 (339)
T PRK06840 49 PEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIMAVCASFPIALKVAKD 127 (339)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-CcccccccccchHHHHHHHHHHH
Confidence 45789999999999999999999999999986543 33433556678899999997 57899999999999999999999
Q ss_pred HHHc-CCCceEEEEccccccC
Q 019555 112 SIQL-GINDIVVAGGMESMSN 131 (339)
Q Consensus 112 ~I~s-G~~~~vLv~g~e~~s~ 131 (339)
+|++ |.++.+||++.|..+.
T Consensus 128 ~l~~~g~~~~~Lvv~~~~~s~ 148 (339)
T PRK06840 128 LLYSDPSIENVLLVGGYRNSD 148 (339)
T ss_pred HHhcCCCccEEEEEeeccccc
Confidence 9999 9999999999998654
No 109
>PLN03173 chalcone synthase; Provisional
Probab=99.63 E-value=6.6e-15 Score=140.40 Aligned_cols=93 Identities=18% Similarity=0.108 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc-ceeeecccCccHHHHHHHHHHHHHcC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQSIQLG 116 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~-~~~~v~~~cas~~~al~~A~~~I~sG 116 (339)
.+|+.+|+++||+++|+++++||.++++++++.. .+..+.+++.+||+++.+ ..+.+..||+++..+|..|..++++|
T Consensus 103 ~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~-~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~ 181 (391)
T PLN03173 103 PKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENN 181 (391)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-ccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999998887744 577888999999997544 35678999999999999999999999
Q ss_pred CCceEEEEccccccC
Q 019555 117 INDIVVAGGMESMSN 131 (339)
Q Consensus 117 ~~~~vLv~g~e~~s~ 131 (339)
..+.|||+++|.+|.
T Consensus 182 ~~~~vLVV~~E~~S~ 196 (391)
T PLN03173 182 KGARVLVVCSEITAV 196 (391)
T ss_pred CCCeEEEEEEehhhh
Confidence 999999999998873
No 110
>PLN03169 chalcone synthase family protein; Provisional
Probab=99.62 E-value=5.9e-15 Score=141.09 Aligned_cols=97 Identities=12% Similarity=0.017 Sum_probs=85.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc-ceeeecccCccHHHHHHHHHHH
Q 019555 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 34 ~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~-~~~~v~~~cas~~~al~~A~~~ 112 (339)
+++..+|+.+|+++||+++|+++++||.+++++++ +...|..+..++.+||+++.+ ..+.+..+|+++..+|.+|..+
T Consensus 103 ~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~ 181 (391)
T PLN03169 103 NEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDI 181 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHHH
Confidence 35678999999999999999999999999988774 445677888999999997554 4789999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|..+.|||+++|..+.
T Consensus 182 ~~~~~~~~vLvv~~e~~s~ 200 (391)
T PLN03169 182 AENNPGSRVLLTTSETTIL 200 (391)
T ss_pred HHhCCCCeEEEEEEEcChh
Confidence 9999999999999998654
No 111
>PLN03172 chalcone synthase family protein; Provisional
Probab=99.62 E-value=8.4e-15 Score=139.79 Aligned_cols=93 Identities=18% Similarity=0.111 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc-eeeecccCccHHHHHHHHHHHHHcC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQLG 116 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~-~~~v~~~cas~~~al~~A~~~I~sG 116 (339)
.+|+.+|+++||+++|+++++||.++++++++.. .|..+.+++.+||+++.+. .+.+..+|+++..+|..|..++++|
T Consensus 103 ~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~-~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~ 181 (393)
T PLN03172 103 PKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 181 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-CchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999999988887743 6778899999999986554 4678999999999999999999999
Q ss_pred CCceEEEEccccccC
Q 019555 117 INDIVVAGGMESMSN 131 (339)
Q Consensus 117 ~~~~vLv~g~e~~s~ 131 (339)
..++|||+++|.+|.
T Consensus 182 ~~~~vLVV~~E~~S~ 196 (393)
T PLN03172 182 AGSRVLVVCSEITAV 196 (393)
T ss_pred CCCeEEEEEEehhhh
Confidence 999999999999873
No 112
>PLN03170 chalcone synthase; Provisional
Probab=99.61 E-value=7e-15 Score=140.80 Aligned_cols=94 Identities=17% Similarity=0.105 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc-ceeeecccCccHHHHHHHHHHHHHc
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQSIQL 115 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~-~~~~v~~~cas~~~al~~A~~~I~s 115 (339)
..+|+.+|+++||+++|+++++||.++++++++.. .+..+..++.+||+++.+ +.+.+..+|+++..+|..|..++++
T Consensus 106 a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~-~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~ 184 (401)
T PLN03170 106 VPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAEN 184 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC-CChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHc
Confidence 35799999999999999999999999988877643 677889999999998654 4789999999999999999999999
Q ss_pred CCCceEEEEccccccC
Q 019555 116 GINDIVVAGGMESMSN 131 (339)
Q Consensus 116 G~~~~vLv~g~e~~s~ 131 (339)
|..+.|||+++|.+|.
T Consensus 185 ~~~~~vLVV~~E~~S~ 200 (401)
T PLN03170 185 NRGARVLVVCSEITAV 200 (401)
T ss_pred CCCCeEEEEEEehhhh
Confidence 9999999999999874
No 113
>PLN03171 chalcone synthase-like protein; Provisional
Probab=99.61 E-value=8.4e-15 Score=140.34 Aligned_cols=95 Identities=15% Similarity=0.012 Sum_probs=85.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc-ceeeecccCccHHHHHHHHHHHHH
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~-~~~~v~~~cas~~~al~~A~~~I~ 114 (339)
+..+|+.+|+++||+++|+++++||.++++++++.. .|..+..++.+||++... ..+.+..+|+++..+|..|..+|+
T Consensus 107 ~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~ 185 (399)
T PLN03171 107 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAE 185 (399)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999988875 678888999999997433 256666799999999999999999
Q ss_pred cCCCceEEEEccccccC
Q 019555 115 LGINDIVVAGGMESMSN 131 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (339)
+|.++.|||+++|.+|.
T Consensus 186 ~~~~~~vLVv~~e~~s~ 202 (399)
T PLN03171 186 NNRGARVLVVAAEITLL 202 (399)
T ss_pred hCCCCeEEEEEEecccc
Confidence 99999999999999875
No 114
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.60 E-value=1.4e-14 Score=138.89 Aligned_cols=150 Identities=23% Similarity=0.299 Sum_probs=109.0
Q ss_pred cHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccc
Q 019555 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGM 154 (339)
Q Consensus 75 ~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~ 154 (339)
.++.+++..+|+. +|.+++..+|+|+..||..|+++|++|++|+|||+|+|..+. ....
T Consensus 138 ~~a~~ia~~lgl~--Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~--~~~~----------------- 196 (392)
T PRK09185 138 SLADFLRAYLGLS--GPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCR--LTLN----------------- 196 (392)
T ss_pred HHHHHHHHHhCCC--CCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccCh--HHHH-----------------
Confidence 3667889999994 699999999999999999999999999999999999996432 1000
Q ss_pred cccccccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc
Q 019555 155 LKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK 234 (339)
Q Consensus 155 ~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~ 234 (339)
.+ . . ...+ ..+.+||
T Consensus 197 ---~~---------~--~------------------------------~~~l---------------------~~~~~~P 211 (392)
T PRK09185 197 ---GF---------N--S------------------------------LESL---------------------SPQPCRP 211 (392)
T ss_pred ---HH---------H--h------------------------------cccc---------------------CCCccCC
Confidence 00 0 0 0000 0123344
Q ss_pred cCHHHHhcCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCC-----ccccchHHHHH
Q 019555 235 FDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIP 309 (339)
Q Consensus 235 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~ 309 (339)
++.. ++|++ ++||++++||++++ ..+ ++|.|++...+... ..+.+..++++
T Consensus 212 fd~~----------~~G~~-------~gEGaa~vVLe~~~------~~~-~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~ 267 (392)
T PRK09185 212 FSAN----------RDGIN-------IGEAAAFFLLERED------DAA-VALLGVGESSDAHHMSAPHPEGLGAILAMQ 267 (392)
T ss_pred CcCC----------CCccc-------eeceEEEEEEEEcC------CCc-EEEEEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 4433 34666 89999999999861 223 68999998866322 11233468999
Q ss_pred HHHHHcCCCCCCCcEEEeecccccc
Q 019555 310 KAIANAGLEASQIDYYEINEAFSVR 334 (339)
Q Consensus 310 ~al~~agl~~~DId~~~~hd~F~~~ 334 (339)
++|+++|++++|||+++.|...+..
T Consensus 268 ~Al~~Agl~~~dId~v~~hgtgt~~ 292 (392)
T PRK09185 268 QALADAGLAPADIGYINLHGTATPL 292 (392)
T ss_pred HHHHHcCCCHHHccEEEeCCCCCcC
Confidence 9999999999999999999988763
No 115
>PLN03168 chalcone synthase; Provisional
Probab=99.60 E-value=2.4e-14 Score=136.64 Aligned_cols=95 Identities=17% Similarity=0.126 Sum_probs=86.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc-ceeeecccCccHHHHHHHHHHHHH
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~-~~~~v~~~cas~~~al~~A~~~I~ 114 (339)
...+|+.+|+++||+++|+++++||.++++++++.. .|..+.+++.+||+++.+ +.+.+..||+++..+|..|..+|+
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~-~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~ 178 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVN-MPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAE 178 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCC-CccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHH
Confidence 347899999999999999999999999999988844 688899999999997543 489999999999999999999999
Q ss_pred cCCCceEEEEccccccC
Q 019555 115 LGINDIVVAGGMESMSN 131 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (339)
+|.+++|||+++|.+|.
T Consensus 179 ~~~~~~VLVV~~E~~S~ 195 (389)
T PLN03168 179 NNKGARVLAVASEVTAV 195 (389)
T ss_pred hCCCCEEEEEEEehhhh
Confidence 99999999999999875
No 116
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=99.59 E-value=1.5e-14 Score=139.39 Aligned_cols=98 Identities=9% Similarity=0.100 Sum_probs=87.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHH---HHcCCCCCcceeeecccCccHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAA---LGAGIPNSVVCTTINKVCSSGMKAVMLA 109 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia---~~lgl~~~~~~~~v~~~cas~~~al~~A 109 (339)
++++..+|+++|++++|+++|+++++||.|++++.++....+..+..++ ..||.+ ++.++++..+|.++..||..|
T Consensus 49 ~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~~AC~G~~~AL~~A 127 (459)
T PLN02577 49 DVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDSTNACYGGTAALLNC 127 (459)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehhhhhHHHHHHHHHH
Confidence 4689999999999999999999999999999999998766777776664 567876 689999999999999999999
Q ss_pred HHHHHcCCC--ceEEEEccccccC
Q 019555 110 AQSIQLGIN--DIVVAGGMESMSN 131 (339)
Q Consensus 110 ~~~I~sG~~--~~vLv~g~e~~s~ 131 (339)
..+|++|.. +.||||++|..+.
T Consensus 128 ~~~i~sg~~~~~~aLVV~aD~a~~ 151 (459)
T PLN02577 128 VNWVESSSWDGRYGLVVAADSAVY 151 (459)
T ss_pred HHHHHcCCCCCCeEEEEEechhhc
Confidence 999999975 9999999998653
No 117
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.59 E-value=1e-14 Score=132.10 Aligned_cols=85 Identities=25% Similarity=0.296 Sum_probs=73.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~ 114 (339)
+...+|+.+|+++||+++|+++++||.+++|..+.+. .++..++..||+ |.+.+.++|+++..+|..|+.+|+
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~---ipssfvar~LGI----P~~gV~gACSTg~eAL~lAa~~Va 124 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQI---TPTSFAARTLGI----PYLGLFGACSTSMEGLALAALIVN 124 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCc---CcHHHHHHHhCC----CccceeecCHHHHHHHHHHHHHHH
Confidence 4456899999999999999999999999999877332 334477788886 458999999999999999999999
Q ss_pred cCCCceEEEEcc
Q 019555 115 LGINDIVVAGGM 126 (339)
Q Consensus 115 sG~~~~vLv~g~ 126 (339)
+|.+|+||++..
T Consensus 125 SG~Ad~VLavts 136 (334)
T PRK12404 125 SGGAKYVLTGAS 136 (334)
T ss_pred cCCCCEEEEEeC
Confidence 999999999754
No 118
>PLN02854 3-ketoacyl-CoA synthase
Probab=99.52 E-value=4.2e-13 Score=130.66 Aligned_cols=92 Identities=14% Similarity=0.148 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec-ccCccHHHHHHHHHHHHHcC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQLG 116 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~-~~cas~~~al~~A~~~I~sG 116 (339)
......|+.++|+++|++|++||.+|++ +++....|..+..|..++|++.+...++++ .||+++..+|..|..+|++|
T Consensus 189 ~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~ 267 (521)
T PLN02854 189 EAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKAN 267 (521)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhC
Confidence 4566778889999999999999999985 556656788999999999998778899998 89999999999999999999
Q ss_pred CCceEEEEcccccc
Q 019555 117 INDIVVAGGMESMS 130 (339)
Q Consensus 117 ~~~~vLv~g~e~~s 130 (339)
..+++||+++|.++
T Consensus 268 ~~~~aLVVstE~~S 281 (521)
T PLN02854 268 PNSYAVVVSTENIT 281 (521)
T ss_pred CCCeEEEEEEeeee
Confidence 99999999999987
No 119
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.49 E-value=4.7e-13 Score=123.77 Aligned_cols=98 Identities=20% Similarity=0.252 Sum_probs=90.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHH
Q 019555 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSI 113 (339)
Q Consensus 34 ~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I 113 (339)
+++...|+++|++++|.++++++++|+.|++|+-.+....-..+..++..||+++...++++..+|-++..||..|..+|
T Consensus 48 ~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v 127 (377)
T COG3425 48 DEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWV 127 (377)
T ss_pred chhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999887766667788999999999988999999999999999999999999
Q ss_pred HcCCCceEEEEccccccC
Q 019555 114 QLGINDIVVAGGMESMSN 131 (339)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~ 131 (339)
.+|..+.+||+|.|....
T Consensus 128 ~s~~~~~~LvI~sD~a~~ 145 (377)
T COG3425 128 ESGMISYGLVIGADTAQY 145 (377)
T ss_pred HcCCccceEEEeehhhcc
Confidence 999999999999987543
No 120
>PLN02932 3-ketoacyl-CoA synthase
Probab=99.49 E-value=1.9e-13 Score=132.20 Aligned_cols=94 Identities=11% Similarity=0.117 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec-ccCccHHHHHHHHHHHHHc
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQL 115 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~-~~cas~~~al~~A~~~I~s 115 (339)
..+|+.+|+++||+++|++|++||.+|++++++. ..|..+..|+.++|+++++..++++ .||+++..+|..|..++++
T Consensus 148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~ 226 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQV 226 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999988876 5788899999999997678999999 8999999999999999999
Q ss_pred CCCceEEEEccccccC
Q 019555 116 GINDIVVAGGMESMSN 131 (339)
Q Consensus 116 G~~~~vLv~g~e~~s~ 131 (339)
|....|||+++|.+|.
T Consensus 227 ~~~~~aLVVstE~~S~ 242 (478)
T PLN02932 227 HRNTYALVVSTENITQ 242 (478)
T ss_pred CCCCeEEEEEEeeccc
Confidence 9999999999999885
No 121
>PLN02377 3-ketoacyl-CoA synthase
Probab=99.45 E-value=8.4e-13 Score=128.48 Aligned_cols=95 Identities=19% Similarity=0.168 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec-ccCccHHHHHHHHHHHHH
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~-~~cas~~~al~~A~~~I~ 114 (339)
...+++..|+++||+++|++|++||.+++ ++++....|..+..|+.++|+++++..++++ .||+++..+|..|..+++
T Consensus 171 ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~ 249 (502)
T PLN02377 171 EAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQ 249 (502)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHH
Confidence 45789999999999999999999999987 6777656788999999999998778999999 699999999999999999
Q ss_pred cCCCceEEEEccccccC
Q 019555 115 LGINDIVVAGGMESMSN 131 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (339)
+|....|||+++|.+|.
T Consensus 250 ~~~~~~aLVVstE~~S~ 266 (502)
T PLN02377 250 VHRNTYAVVVSTENITQ 266 (502)
T ss_pred cCCCCEEEEEEEecccc
Confidence 99999999999999875
No 122
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.42 E-value=2.4e-12 Score=124.10 Aligned_cols=108 Identities=14% Similarity=0.113 Sum_probs=91.3
Q ss_pred EEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHH---cCCCCCccee
Q 019555 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALG---AGIPNSVVCT 93 (339)
Q Consensus 17 IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~---lgl~~~~~~~ 93 (339)
.+|.++..+... .++.++.+|+..|++++|+++++++++||.|++++.++....+..+..++.. +|.+ ++.++
T Consensus 33 ~~GI~~rr~av~---~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~f 108 (454)
T TIGR01833 33 TIGLGQTKMGFC---TDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGI 108 (454)
T ss_pred eechhheecccC---CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEE
Confidence 466666553211 2468999999999999999999999999999999998887777778777764 4565 68999
Q ss_pred eecccCccHHHHHHHHHHHHHcCC--CceEEEEcccc
Q 019555 94 TINKVCSSGMKAVMLAAQSIQLGI--NDIVVAGGMES 128 (339)
Q Consensus 94 ~v~~~cas~~~al~~A~~~I~sG~--~~~vLv~g~e~ 128 (339)
++..+|.++..||..|..+|++|. .+.|||+++|.
T Consensus 109 Di~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 109 DTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred eccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 999999999999999999999996 49999999997
No 123
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.41 E-value=1.8e-12 Score=115.28 Aligned_cols=95 Identities=16% Similarity=0.104 Sum_probs=83.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec-ccCccHHHHHHHHHHHHH
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~-~~cas~~~al~~A~~~I~ 114 (339)
....|.++|.++||+.+++.|++||.+++.++++.. .+.+-..|...||+++...-+.+. .||+.+..++.+|+.+++
T Consensus 75 ~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~-~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~r 153 (356)
T COG3424 75 EAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLA-TPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCR 153 (356)
T ss_pred HHHHHHHHHHHHHhccCCCCHHHCcEEEEEeecccc-CCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHh
Confidence 446799999999999999999999999999888764 456667888999998877766664 799999999999999999
Q ss_pred cCCCceEEEEccccccC
Q 019555 115 LGINDIVVAGGMESMSN 131 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (339)
+....+||++++|..|-
T Consensus 154 a~P~~~vlvV~vELCSL 170 (356)
T COG3424 154 AAPDANVLVVCVELCSL 170 (356)
T ss_pred hCccceEEEEEeeeeee
Confidence 99999999999999875
No 124
>PLN02192 3-ketoacyl-CoA synthase
Probab=99.39 E-value=2.2e-12 Score=125.36 Aligned_cols=93 Identities=18% Similarity=0.183 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec-ccCccHHHHHHHHHHHHHc
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQL 115 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~-~~cas~~~al~~A~~~I~s 115 (339)
...+...|+++||+++|++|++||.+++.+ ......|..+..|..++|++.+...++++ .||+++..+|..|..++++
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~-S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a 254 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQV 254 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEC-CCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHc
Confidence 367899999999999999999999999864 45555788999999999998678999999 6999999999999999999
Q ss_pred CCCceEEEEcccccc
Q 019555 116 GINDIVVAGGMESMS 130 (339)
Q Consensus 116 G~~~~vLv~g~e~~s 130 (339)
+....+||+++|.+|
T Consensus 255 ~~~~~aLVVstE~~S 269 (511)
T PLN02192 255 HPNSYALVISMENIT 269 (511)
T ss_pred CCCCeEEEEEEEecc
Confidence 999999999999987
No 125
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=99.36 E-value=3.8e-12 Score=114.83 Aligned_cols=93 Identities=26% Similarity=0.380 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC-----eEEEEeecCCC------------------------CCCcHHHHHHHHcCCC
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQ-----EVFFGNVLSAN------------------------LGQAPARQAALGAGIP 87 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id-----~i~~g~~~~~~------------------------~~~~~~~~ia~~lgl~ 87 (339)
...|+..++++||+|+|+++..++ ++++|+..++. ....++.+|+..+|+
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl- 165 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL- 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC-
Confidence 357999999999999999885433 47777766621 011356789999999
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccC
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
.+|+++++++|+|++.||..|+++|++|++|.+||+|+|...+
T Consensus 166 -~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~ 208 (254)
T PF00109_consen 166 -RGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLS 208 (254)
T ss_dssp --SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SS
T ss_pred -CCccccccccccccccccchhcccccccccccccccccccccc
Confidence 4799999999999999999999999999999999999995543
No 126
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.29 E-value=2.5e-11 Score=106.22 Aligned_cols=95 Identities=18% Similarity=0.110 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee-cccCccHHHHHHHHHHHHH
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v-~~~cas~~~al~~A~~~I~ 114 (339)
...+|+.+|+++||+++|+++++|+.+++.++++. ..|.+-.++..+|||++.+.-+.+ ..||.++..+|..|....+
T Consensus 99 ~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~-~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~ 177 (226)
T PF00195_consen 99 EAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGI-AAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIAR 177 (226)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSS-ECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCc-CCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHHh
Confidence 44689999999999999999999999999988885 356777889999999887776555 5899999999999999999
Q ss_pred cCCCceEEEEccccccC
Q 019555 115 LGINDIVVAGGMESMSN 131 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (339)
+..-..|||+.+|..|.
T Consensus 178 ~~p~a~VLvv~vElcsl 194 (226)
T PF00195_consen 178 ANPGARVLVVCVELCSL 194 (226)
T ss_dssp HSTT-EEEEEEEEEGGG
T ss_pred CCccceEEEEEEEeeEE
Confidence 99999999999998874
No 127
>PLN00415 3-ketoacyl-CoA synthase
Probab=99.27 E-value=3e-11 Score=115.80 Aligned_cols=97 Identities=18% Similarity=0.167 Sum_probs=84.1
Q ss_pred CCCHHHHHHH-HHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecc-cCccHHHHHHHHHH
Q 019555 34 SVSATKLGSI-AIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK-VCSSGMKAVMLAAQ 111 (339)
Q Consensus 34 ~~~~~~L~~~-A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~-~cas~~~al~~A~~ 111 (339)
.....+|+.. |+++||+++|++|++||.+++. +++....|..+..+..++|+++++..+.++. ||+++..+|..|..
T Consensus 130 ~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs-~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ 208 (466)
T PLN00415 130 ARHESELVIFGALNSLFKKTGIEPREVGIFIVN-CSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATN 208 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CcCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHH
Confidence 3455677766 7778899999999999999864 5555456888899999999987889999996 99999999999999
Q ss_pred HHHcCCCceEEEEccccccC
Q 019555 112 SIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 112 ~I~sG~~~~vLv~g~e~~s~ 131 (339)
+++++....+||+++|..|.
T Consensus 209 ll~a~~~~~aLVVs~E~~S~ 228 (466)
T PLN00415 209 LLKANPNTYAVIVSTENMTL 228 (466)
T ss_pred HHHhCCCCEEEEEEEecccc
Confidence 99999999999999999874
No 128
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.19 E-value=3.3e-11 Score=122.54 Aligned_cols=190 Identities=22% Similarity=0.208 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCCCC---C------------cHHHHHHHHcCC--CCCcceeeec
Q 019555 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANLG---Q------------APARQAALGAGI--PNSVVCTTIN 96 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~~~---~------------~~~~~ia~~lgl--~~~~~~~~v~ 96 (339)
..|..|+..+|+-|+|++|.+.- ++++|+..+.-.+ + -....+++++.. ...+|.+.++
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~D 167 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVD 167 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhhh
Confidence 57999999999999999998665 4666655443111 1 122345555432 1268999999
Q ss_pred ccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHHHHHH
Q 019555 97 KVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICA 176 (339)
Q Consensus 97 ~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 176 (339)
++|+|+..||..|...|++|+||.++|.|+...-. |... +.
T Consensus 168 tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLk-Pt~s---------------------------------lQ----- 208 (2376)
T KOG1202|consen 168 TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILK-PTTS---------------------------------LQ----- 208 (2376)
T ss_pred hhhHHHHHHHHHHHHhhhccCCchhhhcccceEec-cchh---------------------------------hH-----
Confidence 99999999999999999999999999999987665 3211 00
Q ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCCCCccccc
Q 019555 177 NKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAG 256 (339)
Q Consensus 177 ~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~g~l~~~ 256 (339)
|-+ -.++++|..|+.||.. -+||.
T Consensus 209 -----------------------------FlR--------------Lgmls~dGsCkaFDea----------gnGY~--- 232 (2376)
T KOG1202|consen 209 -----------------------------FLR--------------LGMLSPDGSCKAFDEA----------GNGYC--- 232 (2376)
T ss_pred -----------------------------HHH--------------hcCcCCCCcccchhcc----------CCcee---
Confidence 000 0235677778877755 56888
Q ss_pred cCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCc------cccchHHHHHHHHHHcCCCCCCCcEEEeecc
Q 019555 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW------FTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (339)
Q Consensus 257 ~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~------~~~~~~~a~~~al~~agl~~~DId~~~~hd~ 330 (339)
.+||.++++|.....|++. ++.|.....+.++-.. .+.-...-++..|+++|+.|+++-|+|.|..
T Consensus 233 ----Rseg~~avllqrk~~ArRv----YAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGt 304 (2376)
T KOG1202|consen 233 ----RSEGVVAVLLQRKSLARRV----YATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGT 304 (2376)
T ss_pred ----ecCceEEEEEehhHHHHHH----HHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccC
Confidence 5999999999988887765 5667777776653111 1222357899999999999999999999964
No 129
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=99.15 E-value=3.1e-10 Score=102.09 Aligned_cols=93 Identities=18% Similarity=0.169 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec-ccCccHHHHHHHHHHHHHcC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQLG 116 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~-~~cas~~~al~~A~~~I~sG 116 (339)
..+...|+.++|+++|++|++||.+++.+++.. ..|.++..|.+++|+...+..+.+. .||++++-+|..|.++++..
T Consensus 84 e~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~-ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~ 162 (290)
T PF08392_consen 84 EMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFN-PTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAH 162 (290)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCC-cCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhC
Confidence 557888999999999999999999998776643 4678899999999998888888875 79999999999999999999
Q ss_pred CCceEEEEccccccC
Q 019555 117 INDIVVAGGMESMSN 131 (339)
Q Consensus 117 ~~~~vLv~g~e~~s~ 131 (339)
....+||+.+|..+.
T Consensus 163 p~~~ALVVstE~~s~ 177 (290)
T PF08392_consen 163 PNSYALVVSTENISA 177 (290)
T ss_pred CCcEEEEEEEeeccc
Confidence 999999999999885
No 130
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=99.09 E-value=3.6e-10 Score=101.10 Aligned_cols=82 Identities=30% Similarity=0.388 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHHcCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~ 117 (339)
..|..+|++.||+++++.+++||.++.|-.+.+.. .+...+..|++ |-+-+-.+|+++..+|.+|+.+|..|-
T Consensus 52 ~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i---~s~f~ar~l~i----Pf~GlygACST~~e~l~laa~~vdgg~ 124 (329)
T PF07451_consen 52 SKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQII---SSSFAARDLGI----PFLGLYGACSTMMESLALAAMLVDGGF 124 (329)
T ss_dssp HHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCC---HHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhH---HHHHHHHhcCC----CccchhhHHHHHHHHHHHHHHHHhCCC
Confidence 57999999999999999999999999987665432 23344455654 778889999999999999999999999
Q ss_pred CceEEEEcc
Q 019555 118 NDIVVAGGM 126 (339)
Q Consensus 118 ~~~vLv~g~ 126 (339)
+++||++..
T Consensus 125 a~~vla~tS 133 (329)
T PF07451_consen 125 ADYVLAATS 133 (329)
T ss_dssp -SEEEEEEE
T ss_pred cceEEEEec
Confidence 999999644
No 131
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=98.93 E-value=5.9e-10 Score=88.63 Aligned_cols=57 Identities=39% Similarity=0.501 Sum_probs=47.2
Q ss_pred CccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeecccccccccC
Q 019555 282 QVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVRNHVP 338 (339)
Q Consensus 282 ~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd~F~~~~l~~ 338 (339)
+|+++|.+++....+|..+..++..+++++|+++|++++|||++|+||+|++++|+.
T Consensus 2 ~pla~i~~~~~~~~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~~ 58 (123)
T PF02803_consen 2 KPLARIVGYASAGVDPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLAF 58 (123)
T ss_dssp -ESEEEEEEEEEE--GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHH
T ss_pred CeEEEEEEEEEEecCHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHHh
Confidence 578999999999989999999999999999999999999999999999999998753
No 132
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=98.62 E-value=1.1e-07 Score=79.46 Aligned_cols=108 Identities=12% Similarity=0.107 Sum_probs=83.6
Q ss_pred eeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCC--CCCcceeeec
Q 019555 19 GVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGI--PNSVVCTTIN 96 (339)
Q Consensus 19 G~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl--~~~~~~~~v~ 96 (339)
|.++..+.-.. +++++..|++.|++.+|++.++++++|+.+++|+-.+-...-..+..+...||+ +..+..+.+.
T Consensus 38 glgq~~~av~~---~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k 114 (174)
T PF01154_consen 38 GLGQEKMAVPP---PDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMK 114 (174)
T ss_dssp TT--SEEEE-----TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEE
T ss_pred hcCeeEEEeCC---CcccHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehh
Confidence 55554433322 357899999999999999999999999999999877655566788899999999 3456788999
Q ss_pred ccCccHHHHHHHHHHHHHcCCC--ceEEEEccccc
Q 019555 97 KVCSSGMKAVMLAAQSIQLGIN--DIVVAGGMESM 129 (339)
Q Consensus 97 ~~cas~~~al~~A~~~I~sG~~--~~vLv~g~e~~ 129 (339)
.+|-++..||..|..+|+++.. +.+||++.|..
T Consensus 115 ~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA 149 (174)
T PF01154_consen 115 QACYGGTAALQNAVNWVASSPWDGRKALVVASDIA 149 (174)
T ss_dssp SGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE
T ss_pred hhhHHHHHHHHHHHHHHhcCCCCCCeEEEEecccc
Confidence 9999999999999999999864 59999999864
No 133
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=98.26 E-value=1.7e-06 Score=63.78 Aligned_cols=39 Identities=26% Similarity=0.293 Sum_probs=34.9
Q ss_pred eeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccC
Q 019555 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 93 ~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
|++..+|+++..+|..|..+|++|.+++|||++.|..+.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~ 39 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR 39 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence 578899999999999999999999999999999999875
No 134
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.60 E-value=1.1e-05 Score=77.40 Aligned_cols=102 Identities=21% Similarity=0.183 Sum_probs=75.5
Q ss_pred ecCCCCcc-cCHHHHhcCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCC-------
Q 019555 227 DKDEGLEK-FDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE------- 298 (339)
Q Consensus 227 ~~~~~~r~-~~~~~~~~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~------- 298 (339)
+|+++.+. ++.+++++++++. ++++++|||+..||++++++++++.. + .++.|.+....+-.
T Consensus 188 np~a~~~~eI~~~~v~~~~~~~---dp~~r~d~~~~~dg~a~l~~a~~~~~---g----~~tagnas~i~dga~a~~~~~ 257 (392)
T COG0183 188 NPKAGFFDEITPEDVLNSPVVA---DPLRRLDCSPTSDGAAALVPAFEEVG---G----TVTAGNASGINDGAAALLLMS 257 (392)
T ss_pred hHhcCCCCceeeEEecCCceec---CCcccCCCCCChhhhcCceeccccCC---c----eEEEecccccccHHHHHHHhh
Confidence 45555555 8888898887777 47999999999999999999987642 1 45666553322111
Q ss_pred ----ccccchHHHHHHHHHHcCCCCC--CCcEEEeecccccccccC
Q 019555 299 ----WFTTAPSLAIPKAIANAGLEAS--QIDYYEINEAFSVRNHVP 338 (339)
Q Consensus 299 ----~~~~~~~~a~~~al~~agl~~~--DId~~~~hd~F~~~~l~~ 338 (339)
........+..++|+++|+++. ++++.++||+|++..+.+
T Consensus 258 ~~~~~~~~l~~~A~~~a~~~aGv~p~~~~~~v~av~~~~~~~~l~~ 303 (392)
T COG0183 258 ESKAKELGLAPLAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLLA 303 (392)
T ss_pred HHHHHHCCCcHHHHHHHHHHhCCCcccccCCHHHHHHHHHHcCCch
Confidence 0011224678899999999997 999999999999998874
No 135
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=96.79 E-value=0.039 Score=51.47 Aligned_cols=112 Identities=13% Similarity=0.114 Sum_probs=80.3
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHc---CCCCC
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGA---GIPNS 89 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~l---gl~~~ 89 (339)
..-+=+|-|++..+-... .+....|..-+.++++++..++++.|..+-||+-+--...-..=..+.+.+ |=. .
T Consensus 39 ~gKytIGLGq~~Mgfcsd---rEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNt-d 114 (462)
T KOG1393|consen 39 AGKYTIGLGQTQMGFCSD---REDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-D 114 (462)
T ss_pred ccceEeccCcceecccCc---hhhhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCC-c
Confidence 344668888887664322 246778899999999999999999999999997554332333333344444 333 5
Q ss_pred cceeeecccCccHHHHHHHHHHHHHcC--CCceEEEEcccc
Q 019555 90 VVCTTINKVCSSGMKAVMLAAQSIQLG--INDIVVAGGMES 128 (339)
Q Consensus 90 ~~~~~v~~~cas~~~al~~A~~~I~sG--~~~~vLv~g~e~ 128 (339)
...++..++|-+|..||..|..+|++. +-+.+|||..|.
T Consensus 115 IEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDI 155 (462)
T KOG1393|consen 115 IEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDI 155 (462)
T ss_pred cccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeE
Confidence 678888899999999999999999976 334666665553
No 136
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=96.73 E-value=0.0024 Score=50.57 Aligned_cols=48 Identities=31% Similarity=0.402 Sum_probs=33.0
Q ss_pred cEEEEeeEEeeeC-CCcc-----ccchHHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 284 IAKIRGFADAAQA-PEWF-----TTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 284 ~~~i~g~~~~~~~-~~~~-----~~~~~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
++.|.|++...+. .... +.+..++++++|+++|++++|||+++.|..=
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~G 54 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTG 54 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----S
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccc
Confidence 4789999999865 2221 1234789999999999999999999999753
No 137
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=95.62 E-value=0.1 Score=45.85 Aligned_cols=89 Identities=15% Similarity=-0.002 Sum_probs=69.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC------------------------CcHHHHHHHHcCCCCCcc
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG------------------------QAPARQAALGAGIPNSVV 91 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~------------------------~~~~~~ia~~lgl~~~~~ 91 (339)
....|+.+++.+++.+. .++|.+++++..|+... ..++..++...+. ..+
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~ 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGP 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCc
Confidence 45678888888877542 46778999887776210 0255677777777 469
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccC
Q 019555 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 92 ~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
..++..+-.+...+|..|+..+..| .+.||++.+|....
T Consensus 107 ~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p 145 (218)
T PF13723_consen 107 NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLP 145 (218)
T ss_pred eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCC
Confidence 9999999999999999999999999 89999999997653
No 138
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=94.07 E-value=0.072 Score=39.67 Aligned_cols=72 Identities=22% Similarity=0.190 Sum_probs=42.4
Q ss_pred HHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee----cccCccHHHHHHHHHH--HHHcCCCceEE
Q 019555 49 LKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI----NKVCSSGMKAVMLAAQ--SIQLGINDIVV 122 (339)
Q Consensus 49 l~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v----~~~cas~~~al~~A~~--~I~sG~~~~vL 122 (339)
|+++|+.+++||.++.-+. .......++..+|++++....++ +.+|++...+|..+.+ .|+.| |.+|
T Consensus 1 L~~~g~~~~did~~i~hq~-----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~G--d~vl 73 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA-----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPG--DRVL 73 (90)
T ss_dssp HHHTT--GGGESEEEE-SS-----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTT--EEEE
T ss_pred CccccCCHHHCCEEEeCCC-----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCC--CEEE
Confidence 6899999999999997432 23445678889999754332232 2455555666666655 34444 5777
Q ss_pred EEccc
Q 019555 123 AGGME 127 (339)
Q Consensus 123 v~g~e 127 (339)
++++-
T Consensus 74 ~~~~G 78 (90)
T PF08541_consen 74 LVGFG 78 (90)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76553
No 139
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=93.03 E-value=0.44 Score=47.36 Aligned_cols=109 Identities=12% Similarity=-0.079 Sum_probs=66.2
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc-c
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-V 91 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~-~ 91 (339)
+.|+|.|.+...-.......++.........|+++|++.+|++++|||.+-+-.+.+ .......+.||+.+.. .
T Consensus 266 ~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~-----~~~~~~~E~LGl~~~g~~ 340 (498)
T PRK08257 266 RWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFP-----SAVQVAARELGLDLDDPR 340 (498)
T ss_pred ceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCH-----HHHHHHHHHcCcCCCCCC
Confidence 468999987763222211122333334456799999999999999999886533221 1122334668875321 1
Q ss_pred eeeecc--------cCccHHHHHHHHHHHHHcCCCceEEEEcc
Q 019555 92 CTTINK--------VCSSGMKAVMLAAQSIQLGINDIVVAGGM 126 (339)
Q Consensus 92 ~~~v~~--------~cas~~~al~~A~~~I~sG~~~~vLv~g~ 126 (339)
.++++. +.++++..|..++..|+....++.|+.+.
T Consensus 341 pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~~~ 383 (498)
T PRK08257 341 PLTVTGGLPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVTAN 383 (498)
T ss_pred CcCCCcChhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEECC
Confidence 333332 23346667888888898766788887553
No 140
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=91.09 E-value=1.5 Score=41.68 Aligned_cols=53 Identities=21% Similarity=0.152 Sum_probs=35.6
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEE
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFG 65 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g 65 (339)
..|+|.|.+............+.....-...|+++||+++|++++|||.+-+-
T Consensus 225 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~ 277 (375)
T cd00829 225 RPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELY 277 (375)
T ss_pred CCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 46889998876443332211111233455689999999999999999987653
No 141
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=90.92 E-value=0.97 Score=39.84 Aligned_cols=81 Identities=12% Similarity=0.012 Sum_probs=58.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~ 114 (339)
+.-.+.....+.++|.++|+...++|.|.++..-+.++|-.++--++..|.+..+.|.+.+ |++.++... .+
T Consensus 35 r~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgv-----ssL~~~A~~---~~ 106 (220)
T COG1214 35 RNHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGV-----SSLEALAQG---GA 106 (220)
T ss_pred ccHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEe-----CHHHHHHHh---hh
Confidence 4456888999999999999999999999999887777777766666666655446777777 445544333 44
Q ss_pred cCCCceEEE
Q 019555 115 LGINDIVVA 123 (339)
Q Consensus 115 sG~~~~vLv 123 (339)
......|++
T Consensus 107 ~~~~~~v~v 115 (220)
T COG1214 107 EKNAGFVLV 115 (220)
T ss_pred ccCCCceEE
Confidence 444455555
No 142
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=90.59 E-value=0.7 Score=43.65 Aligned_cols=83 Identities=14% Similarity=0.031 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCccee-----ee-cccCccHHHHHHHHH
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT-----TI-NKVCSSGMKAVMLAA 110 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~-----~v-~~~cas~~~al~~A~ 110 (339)
..+.+..+++++|+++|+.+++||.+++=.. +......+...||++++.-.. .+ +.+++|-..+|..+.
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~-----~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~ 280 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQP-----NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVL 280 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCC-----ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHH
Confidence 3455668889999999999999998886321 223456688899997432222 22 244556666777776
Q ss_pred HHHHcCCCceEEEEcc
Q 019555 111 QSIQLGINDIVVAGGM 126 (339)
Q Consensus 111 ~~I~sG~~~~vLv~g~ 126 (339)
..++.|+ .||++|+
T Consensus 281 ~~~~~Gd--~vll~~~ 294 (345)
T TIGR00748 281 DIAEPGD--RILAVSY 294 (345)
T ss_pred HhcCCCC--EEEEEEe
Confidence 6677775 6666554
No 143
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.42 E-value=1.3 Score=42.32 Aligned_cols=82 Identities=11% Similarity=-0.040 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHc-----CCCCCcceeeec----ccCccHHHHHHHHH
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGA-----GIPNSVVCTTIN----KVCSSGMKAVMLAA 110 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~l-----gl~~~~~~~~v~----~~cas~~~al~~A~ 110 (339)
.+.++++++|+++|+.++|||.++.-.. .......++.+| |+++..-..++. ++|+|...+|..+.
T Consensus 273 ~~~~~i~~~L~~~gl~~~DId~~v~Hq~-----n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a~ 347 (378)
T PRK06816 273 YTIKPLLELVDKRNLDPDDIDYFLPHYS-----SEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDELL 347 (378)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEeeCcc-----cHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHHH
Confidence 3477888899999999999998885321 234456677766 887543334443 33444444555443
Q ss_pred H--HHHcCCCceEEEEcccc
Q 019555 111 Q--SIQLGINDIVVAGGMES 128 (339)
Q Consensus 111 ~--~I~sG~~~~vLv~g~e~ 128 (339)
+ .|+.| |.|++.+.+.
T Consensus 348 ~~g~~~~G--d~vl~~~~~s 365 (378)
T PRK06816 348 NSGRLKPG--QKILCFVPES 365 (378)
T ss_pred HcCCCCCC--CEEEEEEecc
Confidence 3 33444 6677766664
No 144
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=88.70 E-value=4.7 Score=38.65 Aligned_cols=52 Identities=17% Similarity=0.086 Sum_probs=34.5
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
+.|.|.|.+.+.........++.....-...++++||+++|++++|||.+-+
T Consensus 232 ~~v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~ 283 (389)
T PRK06064 232 TPVWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEV 283 (389)
T ss_pred CCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 4578999887644332221122222233457899999999999999998765
No 145
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=88.47 E-value=1.5 Score=40.92 Aligned_cols=83 Identities=14% Similarity=0.125 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHH-HHHHHcCC
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLA-AQSIQLGI 117 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A-~~~I~sG~ 117 (339)
+...++++++|+++|+++++||.++. .. .+......+...||+++.....++..-++++...+-.+ ..+++.|+
T Consensus 227 ~~~~~~~~~~L~~~gl~~~did~~~~-h~----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~~~~~ 301 (326)
T PRK05963 227 RMMSGASQNVLASAAMTPQDIDRFFP-HQ----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLANLEQP 301 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEe-CC----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHHhCC
Confidence 44567888999999999999999886 21 13455677889999975443333333333333332222 22333432
Q ss_pred C---ceEEEEcc
Q 019555 118 N---DIVVAGGM 126 (339)
Q Consensus 118 ~---~~vLv~g~ 126 (339)
. |.+|++++
T Consensus 302 ~~~Gd~vll~~~ 313 (326)
T PRK05963 302 LREGERLLFAAA 313 (326)
T ss_pred CCCCCEEEEEEE
Confidence 2 56776554
No 146
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=88.21 E-value=1.6 Score=40.71 Aligned_cols=82 Identities=10% Similarity=-0.030 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHH-HHHHHHHcCCC
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVM-LAAQSIQLGIN 118 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~-~A~~~I~sG~~ 118 (339)
...++++++|+++|+++++||.++.-.. +......+...||++++....++..-+.++...+- .-.+++++|..
T Consensus 231 ~~~~~i~~~L~~~gl~~~did~~~~H~~-----~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~~ 305 (329)
T PRK07204 231 YLMKFIDKLLMDAGYTLADIDLIVPHQA-----SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEAIKQKKV 305 (329)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCC-----CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHHHHcCCC
Confidence 3568889999999999999998886321 23456688899999754333333332333322222 22233444432
Q ss_pred ---ceEEEEcc
Q 019555 119 ---DIVVAGGM 126 (339)
Q Consensus 119 ---~~vLv~g~ 126 (339)
|.+|++++
T Consensus 306 ~~Gd~vll~~~ 316 (329)
T PRK07204 306 QRGNKILLLGT 316 (329)
T ss_pred CCCCEEEEEEE
Confidence 56666543
No 147
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=87.74 E-value=4.6 Score=37.40 Aligned_cols=77 Identities=16% Similarity=0.025 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHH-HHcCCCCCcce----eee-cccCccHHHHHHHHHH
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAA-LGAGIPNSVVC----TTI-NKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia-~~lgl~~~~~~----~~v-~~~cas~~~al~~A~~ 111 (339)
.+...++++++|+++|+.+++||.++.-.. +..........+. ...+.. ..+. -.+ +.+++++...|..+..
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~-~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~G~~~aas~~~~l~~~~~ 281 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGT-GTPIGDVKELKLLRSEFGDK-SPAVSATKAMTGNLSSAAVVLAVDEAVL 281 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCC-CCCCCCHHHHHHHHHHhCCC-CceeECCCcccccchhHhHHHHHHHHHH
Confidence 455678999999999999999999886443 2222222222221 222211 0111 122 2456677788888888
Q ss_pred HHHcC
Q 019555 112 SIQLG 116 (339)
Q Consensus 112 ~I~sG 116 (339)
.++.+
T Consensus 282 ~~~~~ 286 (332)
T cd00825 282 MLEHG 286 (332)
T ss_pred HHhcC
Confidence 88877
No 148
>PRK06158 thiolase; Provisional
Probab=87.66 E-value=3.4 Score=39.65 Aligned_cols=52 Identities=15% Similarity=0.168 Sum_probs=34.3
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
.+.|+|+|.+.+.........++.. ..-...++++|++.+|++++|||.+-+
T Consensus 228 ~~~v~i~g~~~~~~~~~~~~~~~~~-~~~~~~aa~~A~~~AGi~p~DId~~El 279 (384)
T PRK06158 228 RPPVYVLGAAAATWHRQISSMPDLT-VTAAAESGPRAFAMAGLTPADIDVVEL 279 (384)
T ss_pred CCcEEEEEEEEecCCcccccccchh-hhHHHHHHHHHHHHcCCCHHHCcEEEe
Confidence 3568899887653222211122223 233468999999999999999998765
No 149
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=87.53 E-value=1.1 Score=35.18 Aligned_cols=100 Identities=22% Similarity=0.193 Sum_probs=51.8
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCC---Ccc
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPN---SVV 91 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~---~~~ 91 (339)
.|.|.+.+--+.........+...+ .+++++||+++|+++++||.|..- .++... ...-...+...++-.. .++
T Consensus 3 ~i~g~~~~~dg~~~~~~~~p~~~~~-~~~i~~al~~agi~~~~I~~i~~h-g~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 3 VIRGYGVNSDGARSSSLTAPNGAAL-ARAIRRALADAGISPEDIDYIEAH-GTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp EEEEEEEEE-SSSTSSSSSTTHHHH-HHHHHHHHHHHTS-GGGEEEEE-----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred EEEEEEEECCCCCCCCCcCcCHHHH-HHHHHHHHhhhccccccceeeeee-ccccccchhhhhhhhhhhhcccccccccc
Confidence 3566665544422222222333444 788999999999999999998852 222210 1111122233332210 122
Q ss_pred eeee-----cccCccHHHHHHHHHHHHHcCC
Q 019555 92 CTTI-----NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 92 ~~~v-----~~~cas~~~al~~A~~~I~sG~ 117 (339)
...+ ...++++...|..+..+++.|.
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ 111 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHGT 111 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHTE
T ss_pred eeccccccccccccchHHHHHHHHHHHhcCC
Confidence 2222 1357788888888888888874
No 150
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=87.37 E-value=1.5 Score=40.89 Aligned_cols=81 Identities=21% Similarity=0.190 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHH-HHHHHcCCC-
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLA-AQSIQLGIN- 118 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A-~~~I~sG~~- 118 (339)
..++++++|+++|++++|||.+++-.. +......+...||++++.-..++..=++++...+-.+ .++++.|..
T Consensus 228 ~~~~i~~~L~~~g~~~~did~~~~hq~-----~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g~~~ 302 (326)
T CHL00203 228 VPAVIIKCLNALNISIDEVDWFILHQA-----NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNNKIQ 302 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHHHHhCCCC
Confidence 455789999999999999999886321 3345677899999985444344443333333333222 233344433
Q ss_pred --ceEEEEcc
Q 019555 119 --DIVVAGGM 126 (339)
Q Consensus 119 --~~vLv~g~ 126 (339)
+.+|++++
T Consensus 303 ~Gd~vll~~~ 312 (326)
T CHL00203 303 PGQIIVLSGF 312 (326)
T ss_pred CCCEEEEEEE
Confidence 46665543
No 151
>PRK07937 lipid-transfer protein; Provisional
Probab=86.58 E-value=4.5 Score=38.34 Aligned_cols=104 Identities=13% Similarity=0.061 Sum_probs=57.7
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~d-agl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~ 90 (339)
.+.|.|.|.+...-..... ..+...... ++.++++ +|++++|||.+-+--... ...-...+.||+....
T Consensus 224 ~~pv~I~g~~~~~~~~~~~-~~d~~~~~~----~~~a~~~aAgi~~~diD~~Ei~D~F~-----~~~l~~~e~lGl~g~~ 293 (352)
T PRK07937 224 ERPAWITGIEHRIESPSLG-ARDLTRSPS----TALAAEAATGGDAGGVDVAELHAPFT-----HQELILREALGLGDKT 293 (352)
T ss_pred CCcEEEEEEEEeeCCcccc-ccccccHHH----HHHHHHHhcCCCHHHCCEEEEeCCCh-----HHHHHHHHHcCCCCCC
Confidence 3568998887642111111 112333333 3444444 699999999886532211 1112233667773222
Q ss_pred ceeeeccc-------CccHHHHHHHHHHHHHcCCCceEEEEcc
Q 019555 91 VCTTINKV-------CSSGMKAVMLAAQSIQLGINDIVVAGGM 126 (339)
Q Consensus 91 ~~~~v~~~-------cas~~~al~~A~~~I~sG~~~~vLv~g~ 126 (339)
|. ..+.| ++++..-+..++..|+.+.++++|+.+.
T Consensus 294 pv-N~~GG~l~ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~~ 335 (352)
T PRK07937 294 KV-NPSGGALAANPMFAAGLERIGEAARHIWDGSARRALAHAT 335 (352)
T ss_pred Cc-CCCccchhcCchhHHHHHHHHHHHHHHhccCCCEEEEecc
Confidence 22 22221 3467778888889999888999988653
No 152
>PRK04262 hypothetical protein; Provisional
Probab=86.45 E-value=1.4 Score=41.51 Aligned_cols=81 Identities=14% Similarity=0.059 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce--eeec----ccCccHHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC--TTIN----KVCSSGMKAVMLAAQS 112 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~--~~v~----~~cas~~~al~~A~~~ 112 (339)
+...++++++|+++|+++++||.+++-. .+......+...||++++... ..+. .+++|...+|..+...
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq-----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~ 283 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ-----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDV 283 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC-----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHh
Confidence 5677889999999999999999887621 234556778899999753222 1122 3344445566666555
Q ss_pred HHcCCCceEEEEcc
Q 019555 113 IQLGINDIVVAGGM 126 (339)
Q Consensus 113 I~sG~~~~vLv~g~ 126 (339)
++.| |.+|.+++
T Consensus 284 ~~~G--d~vll~~~ 295 (347)
T PRK04262 284 AKPG--DRILVVSF 295 (347)
T ss_pred CCCC--CEEEEEec
Confidence 5555 56666544
No 153
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=85.69 E-value=2.6 Score=39.16 Aligned_cols=78 Identities=13% Similarity=0.057 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeeccc----CccHHHHHHHHHHHHHcC
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKV----CSSGMKAVMLAAQSIQLG 116 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~----cas~~~al~~A~~~I~sG 116 (339)
..++++++|+++|+++++||.+++-. .+......++..||++++....++..- +++...+| ..++++|
T Consensus 227 ~~~~i~~~L~~~g~~~~did~~~~h~-----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L---~~~~~~g 298 (325)
T PRK12879 227 MPKGARQVLEKAGLTKDDIDWVIPHQ-----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLAL---DLALEQG 298 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHH---HHHHHcC
Confidence 35678899999999999999988632 133455788899999753322233322 22223333 3445554
Q ss_pred CC---ceEEEEcc
Q 019555 117 IN---DIVVAGGM 126 (339)
Q Consensus 117 ~~---~~vLv~g~ 126 (339)
.. +.+|++++
T Consensus 299 ~~~~Gd~vll~~~ 311 (325)
T PRK12879 299 KIKPGDTLLLYGF 311 (325)
T ss_pred CCCCCCEEEEEEE
Confidence 33 46666554
No 154
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=85.55 E-value=7.4 Score=34.41 Aligned_cols=89 Identities=15% Similarity=0.047 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHH-HHcCCC---CCcceeee-cccCccHHHHHHHHHH
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAA-LGAGIP---NSVVCTTI-NKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia-~~lgl~---~~~~~~~v-~~~cas~~~al~~A~~ 111 (339)
..+...++++++|+++|+++++||.++.-..... ........+. ...+.. .......+ +..++|+...|..+..
T Consensus 143 ~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~ 221 (254)
T cd00327 143 SGEGLARAARKALEGAGLTPSDIDYVEAHGTGTP-IGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLL 221 (254)
T ss_pred ChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCc-cccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHH
Confidence 3466788999999999999999999886432211 1111111111 111111 00011122 2456677778888877
Q ss_pred HHHcC-------CCceEEEEcc
Q 019555 112 SIQLG-------INDIVVAGGM 126 (339)
Q Consensus 112 ~I~sG-------~~~~vLv~g~ 126 (339)
.++.+ .-+.+++.++
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~~~ 243 (254)
T cd00327 222 MLEHEFIPPTPREPRTVLLLGF 243 (254)
T ss_pred HHhCCCcCCCCCCcCEEEEeeE
Confidence 77766 5567776543
No 155
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=84.91 E-value=3.2 Score=39.74 Aligned_cols=81 Identities=20% Similarity=0.305 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHH-HHHHHcCCC-
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLA-AQSIQLGIN- 118 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A-~~~I~sG~~- 118 (339)
..++++++|+++|+++++||.++.-.. +...-..+...||++++.-..++..-++++...+-.+ .+.++.|..
T Consensus 282 ~~~~i~~~L~~~gl~~~dId~~v~Hq~-----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~~~g~~~ 356 (379)
T PLN02326 282 VPQVIESALQKAGLTAESIDWLLLHQA-----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVRSGKVK 356 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHHHcCCCC
Confidence 445788899999999999998886321 3345567889999985433344444444444433333 233444432
Q ss_pred --ceEEEEcc
Q 019555 119 --DIVVAGGM 126 (339)
Q Consensus 119 --~~vLv~g~ 126 (339)
|.+|+.|+
T Consensus 357 ~Gd~vll~~~ 366 (379)
T PLN02326 357 KGDVIATAGF 366 (379)
T ss_pred CCCEEEEEEE
Confidence 56666544
No 156
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=84.77 E-value=5.9 Score=38.05 Aligned_cols=100 Identities=17% Similarity=0.224 Sum_probs=56.5
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCCCcc
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSVV 91 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~~~~ 91 (339)
..+.|.|.+.+--.... ..++... .-..+++++||+++|+++++||.+.. ..++...+ ..-..-+...+|- ..|
T Consensus 236 ~~~~I~g~g~~~d~~~~-~~~~~~~-~~~~~a~~~Al~~Agl~~~dId~v~~-hgtgt~~~D~~E~~al~~~f~~--~~p 310 (392)
T PRK09185 236 AAVALLGVGESSDAHHM-SAPHPEG-LGAILAMQQALADAGLAPADIGYINL-HGTATPLNDAMESRAVAAVFGD--GVP 310 (392)
T ss_pred CcEEEEEEEEeCCCCCC-CCCCCCH-HHHHHHHHHHHHHcCCCHHHccEEEe-CCCCCcCCCHHHHHHHHHHhCC--CCc
Confidence 35788888765322221 1122222 23358999999999999999999764 22232211 1222233333442 122
Q ss_pred eee-----ecccCccHHHHHHHHHHHHHcCC
Q 019555 92 CTT-----INKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 92 ~~~-----v~~~cas~~~al~~A~~~I~sG~ 117 (339)
... =...++++...+..+...++.|.
T Consensus 311 v~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ 341 (392)
T PRK09185 311 CSSTKGLTGHTLGAAGAVEAAICWLALRHGL 341 (392)
T ss_pred eeCCCcccccChhhcchHHHHHHHHHHhcCC
Confidence 111 12457777888888888888885
No 157
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=84.32 E-value=2.1 Score=39.68 Aligned_cols=80 Identities=15% Similarity=0.040 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec----ccCccHHHHHHHHHH--HH
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN----KVCSSGMKAVMLAAQ--SI 113 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~----~~cas~~~al~~A~~--~I 113 (339)
-..++++++|+++|+++++||.+++-+ .+......++..||+++..-..++. .++++...+|..+.+ .+
T Consensus 220 ~~~~~~~~~l~~~g~~~~di~~~~~h~-----~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~~~~~~ 294 (318)
T TIGR00747 220 KMGDVVEETLEANGLDPEDIDWFVPHQ-----ANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELLRTGRI 294 (318)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHHHcCCC
Confidence 346678899999999999999988522 2345667888999997532222332 233344444444333 23
Q ss_pred HcCCCceEEEEcc
Q 019555 114 QLGINDIVVAGGM 126 (339)
Q Consensus 114 ~sG~~~~vLv~g~ 126 (339)
+.| |.+|++++
T Consensus 295 ~~G--d~vll~~~ 305 (318)
T TIGR00747 295 KPG--DLLLLVAF 305 (318)
T ss_pred CCC--CEEEEEEE
Confidence 444 56666554
No 158
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=84.11 E-value=3.9 Score=38.26 Aligned_cols=82 Identities=24% Similarity=0.187 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecc----cCccHHHHHHHHHHH--
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK----VCSSGMKAVMLAAQS-- 112 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~----~cas~~~al~~A~~~-- 112 (339)
+...++++++|+++|+++++||.+++-. .+......+...||++++.-..++.. ++++...+|..+.+.
T Consensus 239 ~~~~~~~~~~L~~~g~~~~did~~i~H~-----~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~~~~g~ 313 (338)
T PRK09258 239 ELAVDTWEAFLAQLGWAVEQVDRVICHQ-----VGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAAEEGF 313 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecCC-----CCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHHHHhCC
Confidence 4555688899999999999999888632 23345678889999975433333332 233333444444332
Q ss_pred HHcCCCceEEEEccc
Q 019555 113 IQLGINDIVVAGGME 127 (339)
Q Consensus 113 I~sG~~~~vLv~g~e 127 (339)
++.| +.+|++++.
T Consensus 314 ~~~G--d~vll~~~G 326 (338)
T PRK09258 314 LKPG--DRVALLGIG 326 (338)
T ss_pred CCCC--CEEEEEEec
Confidence 3344 667766554
No 159
>PRK06840 hypothetical protein; Validated
Probab=83.74 E-value=3.6 Score=38.53 Aligned_cols=43 Identities=14% Similarity=0.128 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN 88 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~ 88 (339)
..++++++|+++|+++++||.++.-+ .+......+...||+++
T Consensus 239 ~~~~i~~~L~~~gl~~~did~~~~h~-----~~~~~~~~~~~~Lgl~~ 281 (339)
T PRK06840 239 FLKVIREALRKSGYTPKDIDYLAILH-----MKRSAHIALLEGLGLTE 281 (339)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECC-----cCHHHHHHHHHHcCCCH
Confidence 45889999999999999999987522 13445567889999975
No 160
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=83.61 E-value=4.4 Score=39.06 Aligned_cols=100 Identities=15% Similarity=0.111 Sum_probs=54.8
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCC-CCcce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIP-NSVVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~-~~~~~ 92 (339)
+.|.|.+.+.-+.... .++.. ..-...++++||+++|+++++||.+.. ..++... ...-..-+...+|.. ...+.
T Consensus 254 a~I~g~~~~~d~~~~~-~~~~~-~~~~~~a~~~Al~~agi~~~dId~v~~-hgtgt~~~d~~E~~al~~~~~~~~~~~~v 330 (411)
T PRK07314 254 AEVVGYGMTGDAYHMT-APAPD-GEGAARAMKLALKDAGINPEDIDYINA-HGTSTPAGDKAETQAIKRVFGEHAYKVAV 330 (411)
T ss_pred EEEEEEEEcCCCCCCC-CCCCC-cHHHHHHHHHHHHHcCCCHHHCCEEEc-cccCCccccHHHHHHHHHHhcccCCCCee
Confidence 4677777654332211 11111 122457899999999999999999874 2223211 122222333334421 01221
Q ss_pred ee----ec-ccCccHHHHHHHHHHHHHcCC
Q 019555 93 TT----IN-KVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 93 ~~----v~-~~cas~~~al~~A~~~I~sG~ 117 (339)
.. +. ..++++...+..+...++.|.
T Consensus 331 ~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ 360 (411)
T PRK07314 331 SSTKSMTGHLLGAAGAVEAIFSVLAIRDQV 360 (411)
T ss_pred ECccchhchhHHHHHHHHHHHHHHHHhCCC
Confidence 11 12 246677778888888899885
No 161
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=83.28 E-value=3.2 Score=38.36 Aligned_cols=46 Identities=22% Similarity=0.205 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCC
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS 89 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~ 89 (339)
+...++++++|+++|+++++||.+++-.. +......+...||++++
T Consensus 223 ~~~~~~i~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lgl~~~ 268 (320)
T cd00830 223 RLMPESIEEALEKAGLTPDDIDWFVPHQA-----NLRIIEAVAKRLGLPEE 268 (320)
T ss_pred HhhHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCCCHH
Confidence 44568889999999999999998886322 33455678889999754
No 162
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=82.26 E-value=6 Score=37.99 Aligned_cols=100 Identities=17% Similarity=0.151 Sum_probs=54.4
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCC-Ccce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPN-SVVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~-~~~~ 92 (339)
+.|.|.+.+.-+..... ++. ...-..+++++||+++|+++++||.+..- -++... ...-...+...+|-.. ..|.
T Consensus 253 a~i~g~~~~~d~~~~~~-~~~-~~~~~~~ai~~Al~~Agi~~~dId~ve~h-~tgt~~~D~~E~~a~~~~~~~~~~~~~v 329 (407)
T TIGR03150 253 AEIVGYGMSGDAYHITA-PAP-EGEGAARAMRAALKDAGINPEDVDYINAH-GTSTPLGDKAETKAIKRVFGDHAYKLAV 329 (407)
T ss_pred EEEEEEEECCCCCCCCC-CCC-CcHHHHHHHHHHHHHcCCCHhHCCEEeCc-CCCCCCCCHHHHHHHHHHhccCCCCCce
Confidence 35777776543322111 111 12335689999999999999999998742 222211 1222223334444210 1121
Q ss_pred ee----ec-ccCccHHHHHHHHHHHHHcCC
Q 019555 93 TT----IN-KVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 93 ~~----v~-~~cas~~~al~~A~~~I~sG~ 117 (339)
.. +. ..++++...+..+...++.|.
T Consensus 330 ~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ 359 (407)
T TIGR03150 330 SSTKSMTGHLLGAAGAIEAIFTVLAIRDGV 359 (407)
T ss_pred eCCcchhchhHHHHHHHHHHHHHHHHhcCC
Confidence 11 12 246677778888888888885
No 163
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=82.02 E-value=11 Score=35.68 Aligned_cols=100 Identities=17% Similarity=0.146 Sum_probs=52.1
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCccee
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCT 93 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~~~~ 93 (339)
+.|+|.+.+--+..... + ....+-...++++||+++|+++++||.|.. ..++... ...=..-|...+|-....|..
T Consensus 184 a~I~g~~~~~d~~~~~~-p-~p~~~~~~~ai~~AL~~Agl~p~dIdyIea-HgtgT~~~D~~E~~Ai~~~fg~~~~~~v~ 260 (342)
T PRK14691 184 AEIVGYGTSADAYHMTS-G-AEDGDGAYRAMKIALRQAGITPEQVQHLNA-HATSTPVGDLGEINAIKHLFGESNALAIT 260 (342)
T ss_pred EEEEEEEEEcCCCCCCC-C-CCCHHHHHHHHHHHHHHcCCCHHHCCEEEe-cCCCCcCCCHHHHHHHHHHhCCCCCceEE
Confidence 45667665543322211 1 122455678999999999999999998763 2222221 122233444445421112222
Q ss_pred e----ec-ccCccHHHHHHHHHHHHHcCC
Q 019555 94 T----IN-KVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 94 ~----v~-~~cas~~~al~~A~~~I~sG~ 117 (339)
. +. ..++++...+..+...|+.|.
T Consensus 261 s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ 289 (342)
T PRK14691 261 STKSATGHLLGAAGGLETIFTVLALRDQI 289 (342)
T ss_pred CCcccccCCcchhhHHHHHHHHHHHhCCc
Confidence 1 11 134455555555566677775
No 164
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=80.72 E-value=1.7 Score=37.67 Aligned_cols=68 Identities=15% Similarity=0.084 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVM 107 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~ 107 (339)
..-.+.....++++|+++|++.++||.+.++..-+.++|-.++-.++..|....++|.+.+ +.+.++.
T Consensus 31 ~~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTGlRig~~~akgla~~~~~p~~~v-----ssL~~lA 98 (202)
T TIGR03725 31 RNHSEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTGLRIGLATAKGLALALGIPLVGV-----SSLEALA 98 (202)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCCEEec-----CHHHHHH
Confidence 4456788889999999999999999999998766665554444444444322224566555 5555553
No 165
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=80.69 E-value=5.5 Score=37.66 Aligned_cols=88 Identities=13% Similarity=-0.080 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCC-cHHHHHHHHcCCC-CCcceee----e-cccCccHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ-APARQAALGAGIP-NSVVCTT----I-NKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~-~~~~~ia~~lgl~-~~~~~~~----v-~~~cas~~~al~~A~~ 111 (339)
+=..+++++||+++|+++++||.|+.- .++..... .-..-+...+|-. ...|... + ..+.+++...+..+..
T Consensus 234 ~gl~~ai~~AL~~agl~~~dId~v~ah-~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~ 312 (348)
T PRK06147 234 DGLTQAIRAALAEAGCGLEDMDYRIAD-LNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALA 312 (348)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEcC-CCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHH
Confidence 345688999999999999999998853 33332211 1122222223321 0112211 2 1345566666677778
Q ss_pred HHHcCCC--ceEEEEccc
Q 019555 112 SIQLGIN--DIVVAGGME 127 (339)
Q Consensus 112 ~I~sG~~--~~vLv~g~e 127 (339)
.++.|.. ..+||.+..
T Consensus 313 ~~~~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 313 ASRKGYGPGPNVLCHLSD 330 (348)
T ss_pred HHHcCcCCCCcEEEEecC
Confidence 8888844 678876554
No 166
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=80.62 E-value=9.1 Score=36.63 Aligned_cols=79 Identities=15% Similarity=0.124 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCC-CCcceee----e-cccCccHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIP-NSVVCTT----I-NKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~-~~~~~~~----v-~~~cas~~~al~~A~~ 111 (339)
+-..+++++||+++|+++++||.+..- .++...+ ..-...+...++-. ...+... + ...++++...+..+..
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h-~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~ 353 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAH-GTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLL 353 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecc-cccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHH
Confidence 455678999999999999999988752 2232221 11222233333321 0122211 1 2457888999999999
Q ss_pred HHHcCCC
Q 019555 112 SIQLGIN 118 (339)
Q Consensus 112 ~I~sG~~ 118 (339)
+++.|..
T Consensus 354 ~l~~~~i 360 (406)
T cd00834 354 ALRDGVL 360 (406)
T ss_pred HHhcCCc
Confidence 9999853
No 167
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=80.30 E-value=1.7 Score=40.55 Aligned_cols=85 Identities=22% Similarity=0.252 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHH-HHHHHc
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLA-AQSIQL 115 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A-~~~I~s 115 (339)
...+..++++++|+.+++.++|||.++.-.. ...+-..++.+||++++....++..=++++...+-.+ ...++.
T Consensus 221 av~~~~~~~~~~L~~~~l~~~dId~~vpHQa-----n~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~~~~ 295 (323)
T COG0332 221 AVRAMPKAIEEVLEKAGLTPEDIDWFVPHQA-----NLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEALRE 295 (323)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEccccc-----cHHHHHHHHHHcCCCHHHHhhHHHHhcccccchHHHHHHHHhhh
Confidence 3567788899999999999999999986321 3345667889999986666666654444444434333 223333
Q ss_pred CCC---ceEEEEcc
Q 019555 116 GIN---DIVVAGGM 126 (339)
Q Consensus 116 G~~---~~vLv~g~ 126 (339)
|+. |.+|+.++
T Consensus 296 g~ik~Gd~ill~~f 309 (323)
T COG0332 296 GRIKPGDLVLLEAF 309 (323)
T ss_pred CCCCCCCEEEEEee
Confidence 332 55665443
No 168
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=80.16 E-value=5 Score=37.09 Aligned_cols=44 Identities=16% Similarity=0.060 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCC
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS 89 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~ 89 (339)
..++++++|+++|+++++||.++.-+ .+...-..++..||++++
T Consensus 221 ~~~~i~~~l~~~g~~~~di~~~~~h~-----~~~~~~~~~~~~lg~~~~ 264 (319)
T PRK09352 221 LAKVAREALEAAGLTPEDIDWLVPHQ-----ANLRIIDATAKKLGLPME 264 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCCCHH
Confidence 45688999999999999999988632 234456778899999753
No 169
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=80.13 E-value=4.3 Score=38.67 Aligned_cols=81 Identities=11% Similarity=0.094 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHH-cCCC--CCcceeeec----ccCccHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALG-AGIP--NSVVCTTIN----KVCSSGMKAVMLAAQ 111 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~-lgl~--~~~~~~~v~----~~cas~~~al~~A~~ 111 (339)
+...++++++|+++|+++++||.+++=. . +......+... +|+. .......+. .+|+|...+|..+..
T Consensus 271 ~~~~~~i~~~L~~~gl~~~dId~~~~Hq-~----~~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~~~ 345 (372)
T PRK07515 271 PMVAEHIVEHLAENGLTPADVKRFWLHQ-A----NINMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKHSD 345 (372)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC-C----CHHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHHhc
Confidence 3467899999999999999999988621 1 22233334444 5653 221123333 344444555555544
Q ss_pred HHHcCCCceEEEEcc
Q 019555 112 SIQLGINDIVVAGGM 126 (339)
Q Consensus 112 ~I~sG~~~~vLv~g~ 126 (339)
.++.| |.+|.+++
T Consensus 346 ~~~~G--d~vll~~~ 358 (372)
T PRK07515 346 DLAAG--DLGVICSF 358 (372)
T ss_pred cCCCC--CEEEEEEe
Confidence 45555 55665544
No 170
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=79.83 E-value=6 Score=38.20 Aligned_cols=97 Identities=13% Similarity=0.068 Sum_probs=53.7
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceee
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT 94 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~ 94 (339)
+.|+|.+.+..... .... -...++++||+++|++++|||.+-+.-... .......+.||+......+.
T Consensus 280 a~I~g~~~~~~~~~------~~~~-~~~~a~~~al~~Agl~~~DId~~ei~D~f~-----~~~l~~~e~lg~~~~~~pvN 347 (401)
T PRK09050 280 ARILGMATAGVEPR------IMGI-GPAPATRKLLARLGLTIDQFDVIELNEAFA-----AQGLAVLRQLGLADDDARVN 347 (401)
T ss_pred EEEEEEEEeccCCc------cccc-hHHHHHHHHHHHcCCCHHHCCccccCcHhH-----HHHHHHHHHcCCCCCCCCEe
Confidence 57888876543221 1111 236789999999999999999887422110 11122335678732112233
Q ss_pred eccc--------CccHHHHHHHHHHHHHcCCCceEEE
Q 019555 95 INKV--------CSSGMKAVMLAAQSIQLGINDIVVA 123 (339)
Q Consensus 95 v~~~--------cas~~~al~~A~~~I~sG~~~~vLv 123 (339)
.+.+ ++++...+..++..++....+..|+
T Consensus 348 ~~GG~la~Ghp~gasG~~~~~e~~~qLr~~~~~~g~~ 384 (401)
T PRK09050 348 PNGGAIALGHPLGMSGARLVLTALHQLERTGGRYALC 384 (401)
T ss_pred CCCchHhcCCchhHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 3222 3355556667777776544455554
No 171
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=79.51 E-value=6.3 Score=38.04 Aligned_cols=77 Identities=16% Similarity=-0.035 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCCC-cceeeecccCccHHHHHHHHHHHHHcCC
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNS-VVCTTINKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~~-~~~~~v~~~cas~~~al~~A~~~I~sG~ 117 (339)
-..+++++||++||+ +++||+|.. ..++...+ ..=...|...++.+.. ...+.=...++++..-+..+...|+.|.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~a-hgtgT~~~D~~E~~Ai~~~f~~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~ 358 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVIS-GATGAHPATAEEKAALEAALAGPVRGIGTLFGHTMEAQFPLGLALAALSVSKGA 358 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEe-CCCCCCCccHHHHHHHHHHcCCCccccchhhccchHHHHHHHHHHHHHHHhcCc
Confidence 447899999999999 899999774 33333221 1223344455554311 1111112345666677777888888885
Q ss_pred C
Q 019555 118 N 118 (339)
Q Consensus 118 ~ 118 (339)
.
T Consensus 359 v 359 (398)
T PRK06519 359 L 359 (398)
T ss_pred c
Confidence 3
No 172
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=79.08 E-value=12 Score=36.02 Aligned_cols=78 Identities=23% Similarity=0.112 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCcceeee-----cccCccHHHHHHHHHH
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTI-----NKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~~~~~v-----~~~cas~~~al~~A~~ 111 (339)
.+=...++++||+++|+++++||.|.. ..++... ...-...+...+|-. ..|...+ ...++++...+..+..
T Consensus 269 ~~~~~~a~~~al~~ag~~~~~i~~v~~-hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l 346 (399)
T cd00832 269 PPGLARAIRLALADAGLTPEDVDVVFA-DAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALL 346 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEe-ccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHH
Confidence 344578899999999999999998774 3333322 222223344445532 1222111 1235666667777777
Q ss_pred HHHcCC
Q 019555 112 SIQLGI 117 (339)
Q Consensus 112 ~I~sG~ 117 (339)
+|+.|.
T Consensus 347 ~l~~~~ 352 (399)
T cd00832 347 ALRDGV 352 (399)
T ss_pred HHhCCC
Confidence 888875
No 173
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=78.69 E-value=2.9 Score=40.05 Aligned_cols=52 Identities=17% Similarity=0.134 Sum_probs=34.3
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
..+.|.|.+...........++.....-...|+++||+++|++++|||.+-+
T Consensus 231 ~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei 282 (385)
T PRK12578 231 SPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATV 282 (385)
T ss_pred CCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 4588999887533222221222222234568999999999999999998664
No 174
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=77.65 E-value=12 Score=35.88 Aligned_cols=98 Identities=16% Similarity=0.101 Sum_probs=55.6
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCCCcceee
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSVVCTT 94 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~~~~~~~ 94 (339)
.|.|.+.+--+.... .++.+ .+-..+|+++||+++|+++++||.+.. ..++...+ ..-..-+...+|- ..|...
T Consensus 233 ~I~g~~~~~d~~~~~-~~~~~-~~~~~~ai~~Al~~agi~p~dId~i~~-hgtgt~~~D~~E~~al~~~fg~--~~~v~s 307 (381)
T PRK05952 233 QILGFGLTCDAYHMS-APEPD-GKSAIAAIQQCLARSGLTPEDIDYIHA-HGTATRLNDQREANLIQALFPH--RVAVSS 307 (381)
T ss_pred EEEEEEecCCCCCCC-CCCCC-HHHHHHHHHHHHHHhCCCHHHeeEEEc-cCCCCCCCcHHHHHHHHHHcCC--CCeeec
Confidence 467777654333221 11222 345689999999999999999999874 22232211 1112233344441 222222
Q ss_pred e-----cccCccHHHHHHHHHHHHHcCCC
Q 019555 95 I-----NKVCSSGMKAVMLAAQSIQLGIN 118 (339)
Q Consensus 95 v-----~~~cas~~~al~~A~~~I~sG~~ 118 (339)
+ ...++++...+..+...|+.|..
T Consensus 308 ~K~~~GH~~~AaG~~~~~~~~~~l~~~~i 336 (381)
T PRK05952 308 TKGATGHTLGASGALGVAFSLLALRHQQL 336 (381)
T ss_pred chhhhccChHHHHHHHHHHHHHHHhcCcc
Confidence 1 13456777777888888888863
No 175
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=77.62 E-value=8.3 Score=36.99 Aligned_cols=94 Identities=17% Similarity=0.083 Sum_probs=55.5
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHH-HHHHHcCCCCCccee
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPAR-QAALGAGIPNSVVCT 93 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~-~ia~~lgl~~~~~~~ 93 (339)
+.|.|.+.+.... +... .-...++++||+++|++++|||.+-+--.. .+.. ...+.||+. ..| +
T Consensus 269 ~~i~g~g~~~~~~------~~~~-~~~~~a~~~a~~~Agi~~~did~~e~~d~f------a~~~~~~~e~lG~~-~~p-v 333 (386)
T TIGR01930 269 ARIVSFAVAGVDP------EIMG-LGPVPAIPKALKKAGLSISDIDLFEINEAF------AAQVLACIKELGLD-LEK-V 333 (386)
T ss_pred EEEEEEEEecCCC------cccc-ccHHHHHHHHHHHcCCCHHHCCeeehcchh------HHHHHHHHHHhCCC-hhh-c
Confidence 5788887653211 1111 223589999999999999999998432111 1111 122556663 112 2
Q ss_pred eecc--------cCccHHHHHHHHHHHHHcCCCceEEE
Q 019555 94 TINK--------VCSSGMKAVMLAAQSIQLGINDIVVA 123 (339)
Q Consensus 94 ~v~~--------~cas~~~al~~A~~~I~sG~~~~vLv 123 (339)
.++. .++++...+..++..++....++.|+
T Consensus 334 n~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~ 371 (386)
T TIGR01930 334 NVNGGAIALGHPLGASGARIVTTLLHELKRRGGRYGLA 371 (386)
T ss_pred CCCCChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 2222 24567777888888888766777776
No 176
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=76.67 E-value=8.6 Score=37.13 Aligned_cols=95 Identities=13% Similarity=0.054 Sum_probs=53.4
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHH--HHHHHcCCCCCcce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPAR--QAALGAGIPNSVVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~--~ia~~lgl~~~~~~ 92 (339)
+.|+|.+....... ... .-...|+++||+++|+.++|||.+-+.- ..... ...+.+|+......
T Consensus 279 a~I~g~~~~~~~p~------~~~-~~~~~A~~~al~~AGl~~~DID~iei~d-------afa~~~l~~~e~lg~~~~~~p 344 (400)
T PRK13359 279 ARVLGIATAGVEPR------VMG-IGPAPATQKLLARLGMTLDQFDVIELNE-------AFASQGLAVLRELGLADDDAR 344 (400)
T ss_pred EEEEEEEEecCCCC------ccc-hhHHHHHHHHHHHhCCCHHHcCcCccCc-------HhHHHHHHHHHHcCCCCCCCC
Confidence 77888877532111 111 1236899999999999999999887321 11111 22355776321123
Q ss_pred eeeccc--------CccHHHHHHHHHHHHHcCCCceEEE
Q 019555 93 TTINKV--------CSSGMKAVMLAAQSIQLGINDIVVA 123 (339)
Q Consensus 93 ~~v~~~--------cas~~~al~~A~~~I~sG~~~~vLv 123 (339)
+..+.+ .+++...+..+...++....++.|+
T Consensus 345 vN~~GG~la~GHp~gasG~~~v~e~~~qL~~~~~~~g~~ 383 (400)
T PRK13359 345 VNPNGGAIALGHPLGASGARLVTTALYQLERTGGRFALC 383 (400)
T ss_pred EECCCchhhcCCchhHHHHHHHHHHHHHHhhcCCCeEEE
Confidence 333322 3456666677777776543444443
No 177
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=76.40 E-value=11 Score=36.19 Aligned_cols=79 Identities=23% Similarity=0.109 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCC-CCcceeee-----cccCccHHHHHHHHH
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIP-NSVVCTTI-----NKVCSSGMKAVMLAA 110 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~-~~~~~~~v-----~~~cas~~~al~~A~ 110 (339)
.+-..+++++||+++|+++++||.|..- .++...+ ..-...+...++-. ...+...+ ...++++...+..+.
T Consensus 273 ~~~~~~a~~~Al~~Agi~~~dId~i~~h-gtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~ 351 (407)
T cd00828 273 GKGIARAIRTALAKAGLSLDDLDVISAH-GTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGAL 351 (407)
T ss_pred hHHHHHHHHHHHHHcCCCHHHcCEEecc-cccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHH
Confidence 3556789999999999999999988742 2232221 21122232223211 01122221 234566677777788
Q ss_pred HHHHcCC
Q 019555 111 QSIQLGI 117 (339)
Q Consensus 111 ~~I~sG~ 117 (339)
..++.|.
T Consensus 352 ~~l~~~~ 358 (407)
T cd00828 352 QSLEHGL 358 (407)
T ss_pred HHHhcCc
Confidence 8888875
No 178
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=75.99 E-value=13 Score=36.07 Aligned_cols=99 Identities=16% Similarity=0.114 Sum_probs=54.9
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCC--CCcc
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIP--NSVV 91 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~d-agl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~--~~~~ 91 (339)
.|+|.+.+.-+.... .++ ...+-..+++++||++ +|+++++||.|-.- .++...+ ..-...+...+|-. ...+
T Consensus 262 ~i~g~~~~~d~~~~~-~p~-~~~~~~~~ai~~Al~~~Agi~~~dId~ie~h-gtgt~~~D~~E~~al~~~~~~~~~~~~~ 338 (421)
T PTZ00050 262 EIRGYGSSSDAHHIT-APH-PDGRGARRCMENALKDGANININDVDYVNAH-ATSTPIGDKIELKAIKKVFGDSGAPKLY 338 (421)
T ss_pred EEEEEEEcCCCCCCC-CCC-CChHHHHHHHHHHHHhccCCChhhCCEEECC-CccCCCCCHHHHHHHHHHhccccCCCce
Confidence 467777654432211 111 1134457899999999 99999999998742 2222111 11122344444421 1122
Q ss_pred eee----e-cccCccHHHHHHHHHHHHHcCC
Q 019555 92 CTT----I-NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 92 ~~~----v-~~~cas~~~al~~A~~~I~sG~ 117 (339)
... + ...++++...+..+...|+.|.
T Consensus 339 v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ 369 (421)
T PTZ00050 339 VSSTKGGLGHLLGAAGAVESIVTILSLYEQI 369 (421)
T ss_pred EECccccccccHHHHHHHHHHHHHHHHHcCc
Confidence 211 1 1346677777888888899885
No 179
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=74.97 E-value=8 Score=37.35 Aligned_cols=95 Identities=14% Similarity=0.046 Sum_probs=52.2
Q ss_pred ceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHH--HHHHHHcCCCCCcc
Q 019555 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPA--RQAALGAGIPNSVV 91 (339)
Q Consensus 14 ~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~--~~ia~~lgl~~~~~ 91 (339)
.+.|+|.+.+..... .... -...++++||+++|++++|||.+-+.- .... ....+.||+.....
T Consensus 278 ~~~I~g~~~~~~~~~------~~~~-~~~~a~~~al~~Agl~~~DID~~ei~D-------~f~~~~l~~~e~lG~~~~~~ 343 (400)
T TIGR02430 278 RARILAAATAGVEPR------IMGI-GPVPATQKLLARAGLSIDQFDVIELNE-------AFAAQALAVLRELGLADDDA 343 (400)
T ss_pred cEEEEEEEEecCCCc------cccc-hHHHHHHHHHHHhCCCHHHCCCcccCc-------HHHHHHHHHHHHcCCCCCCC
Confidence 467888766532111 1111 236789999999999999999887321 1112 22335578732222
Q ss_pred eeeeccc--------CccHHHHHHHHHHHHHcCCCceEE
Q 019555 92 CTTINKV--------CSSGMKAVMLAAQSIQLGINDIVV 122 (339)
Q Consensus 92 ~~~v~~~--------cas~~~al~~A~~~I~sG~~~~vL 122 (339)
.+..+.| ++++...+..++..++....++.|
T Consensus 344 pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~~~~~g~ 382 (400)
T TIGR02430 344 RVNPNGGAIALGHPLGASGARLVLTALRQLERSGGRYAL 382 (400)
T ss_pred eECCCCchHhccChHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 3333322 235556666666667643334444
No 180
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=74.75 E-value=27 Score=33.68 Aligned_cols=51 Identities=16% Similarity=-0.111 Sum_probs=32.9
Q ss_pred eEEEeeccCcccccCCC-----CCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEE
Q 019555 15 VCIVGVARTPMGGFLGS-----LSSVSATKLGSIAIECALKRANVKPLLVQEVFFG 65 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~-----~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g 65 (339)
|.|+|.+.......... ..+.........|+++||+.+|++++|||.+-+-
T Consensus 247 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~ 302 (403)
T PRK06289 247 PRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVH 302 (403)
T ss_pred EEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeee
Confidence 79999887633211110 0111222335689999999999999999987653
No 181
>PRK08256 lipid-transfer protein; Provisional
Probab=74.73 E-value=22 Score=34.06 Aligned_cols=52 Identities=19% Similarity=0.052 Sum_probs=33.0
Q ss_pred CceEEEeeccCcccccCCCC---CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 13 RDVCIVGVARTPMGGFLGSL---SSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~---~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
..|.|.|.+.+......-.. .+.........|++++|+++|++++|||.+-+
T Consensus 235 ~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei 289 (391)
T PRK08256 235 RAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVEL 289 (391)
T ss_pred CCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEee
Confidence 45888887654322111000 11122334568999999999999999998765
No 182
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=74.72 E-value=10 Score=36.80 Aligned_cols=47 Identities=19% Similarity=0.121 Sum_probs=30.8
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
-|+|.+.+--+..... +.. --+=+..|.+.||+++|+++++||+|..
T Consensus 255 ei~G~g~~~Da~h~t~-P~p-~g~Ga~~am~~AL~~Agl~~~~idYina 301 (412)
T COG0304 255 EIVGYGTTSDAYHITA-PAP-DGEGAIRAMRAALADAGLTPEDIDYINA 301 (412)
T ss_pred EEEEEEecccccccCC-CCC-CCchHHHHHHHHHHHcCCCHhHCCEEeC
Confidence 3567776554333221 111 1233458899999999999999999884
No 183
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=74.71 E-value=22 Score=34.31 Aligned_cols=80 Identities=20% Similarity=0.167 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCC----Ccceeee-----cccCccHHHHHH
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPN----SVVCTTI-----NKVCSSGMKAVM 107 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~----~~~~~~v-----~~~cas~~~al~ 107 (339)
.+....++++||+++|+.+++||.+..- .++...+ ..-...+...+|... ..+...+ ...++++...+.
T Consensus 278 ~~~~~~a~~~al~~Agl~~~dId~i~~h-~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~ 356 (424)
T smart00825 278 GPAQARLIRQALARAGVDPADVDYVEAH-GTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLI 356 (424)
T ss_pred HHHHHHHHHHHHHHhCCCHHHccEEEee-CCCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHH
Confidence 3455789999999999999999998753 2222211 111223333343210 1121111 123567777778
Q ss_pred HHHHHHHcCCC
Q 019555 108 LAAQSIQLGIN 118 (339)
Q Consensus 108 ~A~~~I~sG~~ 118 (339)
.+...++.|..
T Consensus 357 ~~~~~l~~~~i 367 (424)
T smart00825 357 KVVLALRHGTI 367 (424)
T ss_pred HHHHHHhCCCC
Confidence 88888988853
No 184
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=74.68 E-value=12 Score=36.21 Aligned_cols=99 Identities=14% Similarity=0.118 Sum_probs=52.0
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCCCcceee
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSVVCTT 94 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~~~~~~~ 94 (339)
.|.|.+.+--+.... .+. ...+-..+++++||+++|+++++||.|..- .++...+ ..-...+...+|-....+...
T Consensus 267 ~i~G~~~~~d~~~~~-~~~-~~~~~~~~a~~~Al~~Agi~p~dId~i~~h-gtgt~~~D~~E~~al~~~fg~~~~~~v~s 343 (424)
T PRK06333 267 ELVGYGTSADAYHMT-AGP-EDGEGARRAMLIALRQAGIPPEEVQHLNAH-ATSTPVGDLGEVAAIKKVFGHVSGLAVSS 343 (424)
T ss_pred EEEEEEEcCCCCCCC-CCC-CCcHHHHHHHHHHHHHcCCCHHHCCEEecc-CCCCccchHHHHHHHHHHhCCCCCceeEC
Confidence 467776553222211 011 123456789999999999999999998742 2222111 111223344444110112111
Q ss_pred ----ec-ccCccHHHHHHHHHHHHHcCC
Q 019555 95 ----IN-KVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 95 ----v~-~~cas~~~al~~A~~~I~sG~ 117 (339)
+. ..++++...+..+...++.|.
T Consensus 344 ~K~~~GH~~gAaG~~~~~~~~l~l~~g~ 371 (424)
T PRK06333 344 TKSATGHLLGAAGGVEAIFTILALRDQI 371 (424)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHhcCC
Confidence 11 234566666667778888885
No 185
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=74.37 E-value=18 Score=34.67 Aligned_cols=103 Identities=17% Similarity=0.142 Sum_probs=55.4
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCC----CC
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIP----NS 89 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~----~~ 89 (339)
+.|.|.+.+.-+..... . ....+-...++++||+++|+++++||.+.+- .++...+ ..-...+...++-. ..
T Consensus 257 a~i~g~~~~~~~~~~~~-~-~p~~~~~~~a~~~al~~Agi~~~did~i~~h-gtgt~~~D~~E~~al~~~f~~~~~~~~~ 333 (421)
T cd00833 257 AVIRGSAVNQDGRTKGI-T-APSGEAQAALIRRAYARAGVDPSDIDYVEAH-GTGTPLGDPIEVEALAKVFGGSRSADQP 333 (421)
T ss_pred EEEEEEEEcCCCCCCCC-c-CCCHHHHHHHHHHHHHHhCCCHHHCcEEEee-CCCCCCCCHHHHHHHHHHHhccCCCCCc
Confidence 35666665443322111 1 1124556789999999999999999998753 2232221 11122233333211 01
Q ss_pred cce-----eeecccCccHHHHHHHHHHHHHcCCCce
Q 019555 90 VVC-----TTINKVCSSGMKAVMLAAQSIQLGINDI 120 (339)
Q Consensus 90 ~~~-----~~v~~~cas~~~al~~A~~~I~sG~~~~ 120 (339)
.+. ..=...++++...+..+...++.|...-
T Consensus 334 ~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~ 369 (421)
T cd00833 334 LLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPP 369 (421)
T ss_pred eeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCC
Confidence 111 1112346677777888888899886544
No 186
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=72.94 E-value=22 Score=34.64 Aligned_cols=100 Identities=16% Similarity=0.166 Sum_probs=51.6
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCC---Cc
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPN---SV 90 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~---~~ 90 (339)
+.|.|.+.+.-+.... .++. ..+-...|+++||+++|+++++||.+.+ ..++...+ ..-...+...+|-.. ..
T Consensus 277 a~I~g~~~~~d~~~~~-~p~~-~~~~~~~a~~~Al~~Agi~~~dId~ve~-hgtgt~~~D~~E~~ai~~~~~~~~~~~~~ 353 (437)
T PLN02836 277 AEVRGYGMSGDAHHIT-QPHE-DGRGAVLAMTRALQQSGLHPNQVDYVNA-HATSTPLGDAVEARAIKTVFSEHATSGGL 353 (437)
T ss_pred EEEEeeeecCCCCCCc-CCCc-chHHHHHHHHHHHHHcCCCHhHcCEEEc-cCCcCcCcCHHHHHHHHHHhcccccCCCC
Confidence 4467777654332211 1111 1244567899999999999999999864 22222111 111122333332110 11
Q ss_pred ceeee----c-ccCccHHHHHHHHHHHHHcCC
Q 019555 91 VCTTI----N-KVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 91 ~~~~v----~-~~cas~~~al~~A~~~I~sG~ 117 (339)
+...+ . ..++++...+..+...++.|.
T Consensus 354 ~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ 385 (437)
T PLN02836 354 AFSSTKGATGHLLGAAGAVEAIFSVLAIHHGI 385 (437)
T ss_pred eeECCcccccccHHHHHHHHHHHHHHHHhcCc
Confidence 21111 1 234556666677777888885
No 187
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=72.54 E-value=11 Score=35.69 Aligned_cols=79 Identities=6% Similarity=-0.103 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce-eeecccCccHHHHHHHH-HHHHHcCC
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC-TTINKVCSSGMKAVMLA-AQSIQLGI 117 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~-~~v~~~cas~~~al~~A-~~~I~sG~ 117 (339)
...++++++|+++|+++++||.+++-. .+...-..+..+||+++..-. ..+..-++++...+-.+ .+.+..|.
T Consensus 243 ~~~~~i~~~L~~~gl~~~did~~v~HQ-----~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~~~~~~ 317 (353)
T PRK12880 243 CEPKSFKEILEFSKVDEKDIAFHLFHQ-----SNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKE 317 (353)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHHHHcCC
Confidence 345688899999999999999998632 134566788999999854322 22344455555544333 34456787
Q ss_pred CceEEE
Q 019555 118 NDIVVA 123 (339)
Q Consensus 118 ~~~vLv 123 (339)
.+.+|+
T Consensus 318 ~~~ll~ 323 (353)
T PRK12880 318 FKASLS 323 (353)
T ss_pred cEEEEE
Confidence 774444
No 188
>PRK09051 beta-ketothiolase; Provisional
Probab=71.70 E-value=19 Score=34.62 Aligned_cols=92 Identities=16% Similarity=0.036 Sum_probs=52.2
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHH--HHHHHcCCCCCcce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPAR--QAALGAGIPNSVVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~--~ia~~lgl~~~~~~ 92 (339)
+.|+|.+....... ... .-...|+++||+++|++++|||.+-+-- ..... ...+.||+.+ ..
T Consensus 275 ~~I~g~~~~~~~~~------~~~-~~~~~a~~~al~~agi~~~did~~ei~d-------~f~~~~~~~~e~lg~~~--~~ 338 (394)
T PRK09051 275 ARLVGYAHAGVDPE------YMG-IGPVPATQKALERAGLTVADLDVIEANE-------AFAAQACAVTRELGLDP--AK 338 (394)
T ss_pred EEEEEEEEeccCCC------ccc-ccHHHHHHHHHHHcCCCHHHcCEEEecC-------ccHHHHHHHHHHhCCCc--cc
Confidence 36777776543211 111 2236789999999999999999987621 12222 2335577642 22
Q ss_pred eeecc--------cCccHHHHHHHHHHHHHcCCCceEE
Q 019555 93 TTINK--------VCSSGMKAVMLAAQSIQLGINDIVV 122 (339)
Q Consensus 93 ~~v~~--------~cas~~~al~~A~~~I~sG~~~~vL 122 (339)
+..+. .++||...+..+...++....++.|
T Consensus 339 vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~~~~~g~ 376 (394)
T PRK09051 339 VNPNGSGISLGHPVGATGAIITVKALYELQRIGGRYAL 376 (394)
T ss_pred cCCCccHHHhcchHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 22222 2456666677777777644334444
No 189
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=71.60 E-value=18 Score=35.09 Aligned_cols=98 Identities=15% Similarity=0.156 Sum_probs=52.8
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCcceee
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTT 94 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~~~~~ 94 (339)
.|+|.+.+--+.... .++.+. .-..+++++||+++|+++++||.+.. ..++... ...-...+...+|-. ..+...
T Consensus 265 ~i~g~~~~~dg~~~~-~~~~~~-~~~~~a~~~Al~~agi~~~did~ie~-hgtgt~~~D~~E~~Al~~~fg~~-~~~v~s 340 (418)
T PRK07910 265 RIMGASITSDGFHMV-APDPNG-ERAGHAMTRAIELAGLTPGDIDHVNA-HATGTSVGDVAEGKAINNALGGH-RPAVYA 340 (418)
T ss_pred EEEEEEEecCCCCCC-CCCCCH-HHHHHHHHHHHHHhCCCHHHCCEEEc-CCcCCCCCCHHHHHHHHHHhCCC-CCceeC
Confidence 456666544333221 122222 33578999999999999999999863 2223222 122233444555531 111111
Q ss_pred ----e-cccCccHHHHHHHHHHHHHcCC
Q 019555 95 ----I-NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 95 ----v-~~~cas~~~al~~A~~~I~sG~ 117 (339)
+ ...++++...+..+..+++.|.
T Consensus 341 ~K~~~GH~~~AaG~~~li~~~l~l~~~~ 368 (418)
T PRK07910 341 PKSALGHSVGAVGAVESILTVLALRDGV 368 (418)
T ss_pred ccccccccHHHHHHHHHHHHHHHHhcCc
Confidence 1 1235566666667777788774
No 190
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=71.36 E-value=30 Score=33.23 Aligned_cols=53 Identities=17% Similarity=0.095 Sum_probs=32.6
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCC--CCccCeEEEE
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVK--PLLVQEVFFG 65 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~--~~~Id~i~~g 65 (339)
.+.|.|.|.+..-- .......+.........|+++|++.+|++ ++|||.+-+-
T Consensus 230 ~~pv~I~g~g~~~~-~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~ 284 (385)
T PRK06066 230 DDPVWIKGIGWSTE-SSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVD 284 (385)
T ss_pred CCCEEEEEEEEecC-CcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEe
Confidence 35688888876321 11111112222333447999999999997 6899987653
No 191
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=70.72 E-value=20 Score=34.59 Aligned_cols=96 Identities=16% Similarity=0.098 Sum_probs=50.9
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCC-Cccee
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN-SVVCT 93 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~-~~~~~ 93 (339)
+.|.|.+.+--+... ...+... ..+++++||+++|+++++||.+.. ..++... .+....-+. .+... ..|..
T Consensus 261 a~I~g~~~~~d~~~~---~~p~~~~-~~~a~~~Al~~Agi~~~dId~v~~-hgtgt~~-~D~~E~~al-~~~~~~~~~v~ 333 (410)
T PRK07103 261 AKLLGWSMRLDANRG---PDPSLEG-EMRVIRAALRRAGLGPEDIDYVNP-HGTGSPL-GDETELAAL-FASGLAHAWIN 333 (410)
T ss_pred EEEEEEEEecCCCCC---CCCCHHH-HHHHHHHHHHHcCCCHHHCCEEEc-cCCCCCC-CCHHHHHHH-hcCCCCCCeEE
Confidence 456776654322221 1122222 358999999999999999998764 2222221 122211111 22210 12221
Q ss_pred ee-----cccCccHHHHHHHHHHHHHcCC
Q 019555 94 TI-----NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 94 ~v-----~~~cas~~~al~~A~~~I~sG~ 117 (339)
.. ...++++...+..+...++.|.
T Consensus 334 s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ 362 (410)
T PRK07103 334 ATKSLTGHGLSAAGIVELIATLLQMRAGF 362 (410)
T ss_pred CCCcccccCchhhhHHHHHHHHHHHhCCe
Confidence 11 1235677777777888888885
No 192
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=70.70 E-value=29 Score=33.58 Aligned_cols=78 Identities=18% Similarity=0.173 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCC--CCcceeee-----cccCccHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIP--NSVVCTTI-----NKVCSSGMKAVMLAA 110 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~--~~~~~~~v-----~~~cas~~~al~~A~ 110 (339)
+-...++++||+++|+++++||.|.. ..++... ...-..-|...+|-. ...|...+ ...++++...+..+.
T Consensus 278 ~~~~~a~~~Al~~agi~~~did~ie~-hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~ 356 (414)
T PRK08722 278 SGGALAMEAAMRDAGVTGEQIGYVNA-HGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITV 356 (414)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEc-cCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHH
Confidence 34578899999999999999998763 2222221 222223344444421 11222221 123566777777777
Q ss_pred HHHHcCC
Q 019555 111 QSIQLGI 117 (339)
Q Consensus 111 ~~I~sG~ 117 (339)
..|+.|.
T Consensus 357 l~l~~~~ 363 (414)
T PRK08722 357 MSLVDQI 363 (414)
T ss_pred HHHhcCc
Confidence 8888886
No 193
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=69.43 E-value=3.2 Score=37.76 Aligned_cols=65 Identities=20% Similarity=0.109 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCc----HHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHH
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQA----PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~----~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~ 111 (339)
.+.....++++|+++++++++||.|.++..-+.+++-. .+.-++..+ +.|.+.+ +.+.++.....
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~----~~Pli~v-----~~l~a~a~~~~ 98 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALAL----NIPLIGV-----SHLEAHALSAR 98 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHT----T--EEEE-----EHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHh----CCCeEee-----ccHHHHHHhHh
Confidence 56778889999999999999999999977654433222 333344444 4566666 44555544443
No 194
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=69.23 E-value=15 Score=37.01 Aligned_cols=76 Identities=18% Similarity=0.149 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCCCcceee----e-cccCccHHHHHHHHHHHHH
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSVVCTT----I-NKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~~~~~~~----v-~~~cas~~~al~~A~~~I~ 114 (339)
...++++||+++|+++++||+|.. ..++...+ ..=...|...+|-.+..|... + ...++++...+..+..+|+
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyIna-HGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~ 485 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINA-HATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIR 485 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEc-cCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHh
Confidence 467899999999999999998763 23332221 111223344444211122211 1 2346677777788888899
Q ss_pred cCC
Q 019555 115 LGI 117 (339)
Q Consensus 115 sG~ 117 (339)
.|.
T Consensus 486 ~g~ 488 (540)
T PLN02787 486 TGW 488 (540)
T ss_pred cCC
Confidence 886
No 195
>PRK05790 putative acyltransferase; Provisional
Probab=68.87 E-value=18 Score=34.80 Aligned_cols=76 Identities=13% Similarity=0.070 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHH--HHHHHcCCCC---C--cceeee-cccCccHHHHHHHHHHH
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPAR--QAALGAGIPN---S--VVCTTI-NKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~--~ia~~lgl~~---~--~~~~~v-~~~cas~~~al~~A~~~ 112 (339)
...++++||+++|++++|||.+-+.- ..... ...+.||+.. + +-.... ...++||..-+..++..
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~d-------~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~q 365 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEINE-------AFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHE 365 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCc-------HHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHH
Confidence 45789999999999999999987421 11111 2234566531 1 111111 12456777778888888
Q ss_pred HHcCCCceEEE
Q 019555 113 IQLGINDIVVA 123 (339)
Q Consensus 113 I~sG~~~~vLv 123 (339)
++....++.|+
T Consensus 366 L~~~~~~~gl~ 376 (393)
T PRK05790 366 MKRRGAKKGLA 376 (393)
T ss_pred HHhcCCCeEEE
Confidence 88655666665
No 196
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=67.84 E-value=27 Score=33.73 Aligned_cols=94 Identities=20% Similarity=0.217 Sum_probs=50.9
Q ss_pred EEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCcceeee
Q 019555 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTI 95 (339)
Q Consensus 17 IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~~~~~v 95 (339)
|.|.+.+--+.... ..+. +-..+++++||+++|+++++||.+.. ..++... ...-...|...+|- ..|...+
T Consensus 257 i~g~~~~~d~~~~~---~p~~-~~~~~ai~~AL~~Agi~p~dId~I~~-Hgtgt~~~D~~E~~Ai~~~fg~--~~pv~s~ 329 (405)
T PRK09116 257 IVGFGTNSDGAHVT---QPQA-ETMQIAMELALKDAGLAPEDIGYVNA-HGTATDRGDIAESQATAAVFGA--RMPISSL 329 (405)
T ss_pred EEEEEEcCCCCcCC---CCCH-HHHHHHHHHHHHHhCCCHHHcCEEEC-cCccCCCCCHHHHHHHHHHhCC--CCeeECc
Confidence 56666554332211 1122 34468999999999999999998863 2223221 22223344445552 2232222
Q ss_pred c-----ccCccHHHHHHHHHHHHHcCC
Q 019555 96 N-----KVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 96 ~-----~~cas~~~al~~A~~~I~sG~ 117 (339)
. ..++++..-+..+...++.|.
T Consensus 330 K~~~GH~~~AaG~~~~~~~~~~l~~~~ 356 (405)
T PRK09116 330 KSYFGHTLGACGALEAWMSIEMMNEGW 356 (405)
T ss_pred chhhcccHHHHHHHHHHHHHHHHHcCc
Confidence 1 224555555566677777775
No 197
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=67.64 E-value=21 Score=34.51 Aligned_cols=42 Identities=19% Similarity=0.043 Sum_probs=29.3
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEE
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVF 63 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~ 63 (339)
+.|.|.+...... +..... ...++++||+++|++++|||.+-
T Consensus 286 a~I~g~~~~~~~~------~~~~~~-~~~a~~~al~~Agi~~~did~~e 327 (406)
T PRK07851 286 ARIVSTGVSGLSP------EIMGLG-PVEASKQALARAGMSIDDIDLVE 327 (406)
T ss_pred EEEEEEEEccCCC------Cccchh-HHHHHHHHHHHhCCCHHHCCeeh
Confidence 5788887642211 112222 46899999999999999999984
No 198
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=67.57 E-value=18 Score=34.99 Aligned_cols=42 Identities=21% Similarity=0.070 Sum_probs=29.1
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
.|+|.+.+.... +.... -...|+++||+++|++++|||.+-+
T Consensus 281 ~i~g~~~~~~~~------~~~~~-~~~~A~~~al~~Agi~~~did~~ei 322 (399)
T PRK09052 281 RFVSFAVAGVPP------EIMGI-GPIEAIPAALKQAGLKQDDLDWIEL 322 (399)
T ss_pred EEEEEEEeccCC------Cccch-hHHHHHHHHHHHcCCCHHHcCEEEe
Confidence 677776653211 11112 3468999999999999999999873
No 199
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=66.65 E-value=10 Score=36.37 Aligned_cols=51 Identities=22% Similarity=-0.120 Sum_probs=33.4
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
..|.|.|.+..--...... .+.....-...|+++||+++|++++|||.+-+
T Consensus 235 ~~v~i~g~~~~~~~~~~~~-~~~~~~~~~~~a~~~a~~~agl~~~did~~e~ 285 (389)
T PRK07516 235 RAVRFRARAHVNDFLPLSR-RDPLAFEGPRRAWQRALAQAGVTLDDLSFVET 285 (389)
T ss_pred CCEEEEEEEeccCcccccC-CCccccHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 4688888876532111111 11112345568999999999999999998765
No 200
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=66.21 E-value=6.7 Score=36.33 Aligned_cols=49 Identities=18% Similarity=0.026 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCc----HHHHHHHHcCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQA----PARQAALGAGI 86 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~----~~~~ia~~lgl 86 (339)
.+.....++++|+++|+++++||.|.++..-+...+-. .++-++..+++
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~~~~~ 101 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLALSLDK 101 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHHHhCC
Confidence 56777889999999999999999999976555444333 34444444444
No 201
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=66.14 E-value=7.7 Score=37.97 Aligned_cols=50 Identities=22% Similarity=0.044 Sum_probs=33.7
Q ss_pred ceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 14 ~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
.|.|+|.+........ ...+......+..|+++||+.+|++++|||.+-+
T Consensus 285 ~v~i~g~~~~~~~~~~-~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei 334 (438)
T PTZ00455 285 LVEIKSLACASGNLYE-DPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEV 334 (438)
T ss_pred cEEEEEEEEecCCccc-CccccccchHHHHHHHHHHHHcCCCHHHCcEeee
Confidence 4889888776432111 1112233334578999999999999999998765
No 202
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=64.61 E-value=11 Score=36.14 Aligned_cols=50 Identities=16% Similarity=0.157 Sum_probs=33.9
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
..|+|.|.+...-... ...++.. ......++++|++.+|++++|||.+-+
T Consensus 231 ~~v~I~g~~~~~~~~~-~~~~~~~-~~~~~~aa~~a~~~AGi~~~did~~el 280 (388)
T PRK08142 231 PLVKVLGAGEAIKGQM-GGKVDLT-YSGAAWSGPAAFAEAGVTPADIKYASI 280 (388)
T ss_pred CCEEEEEEEEecCCcc-ccCcccc-cHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 4599999987532211 1122333 344568999999999999999997654
No 203
>PRK07855 lipid-transfer protein; Provisional
Probab=64.26 E-value=9.1 Score=36.74 Aligned_cols=53 Identities=8% Similarity=0.038 Sum_probs=34.0
Q ss_pred CCceEEEeeccCcccccC----CCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 12 ARDVCIVGVARTPMGGFL----GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~----~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
.+.|.|.|.+..-..... ...++.........|+++|++.+|++++|||.+-+
T Consensus 235 ~~pv~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El 291 (386)
T PRK07855 235 QRPAVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAIL 291 (386)
T ss_pred CCCEEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEe
Confidence 356899888753211110 01123333344568999999999999999998754
No 204
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=63.79 E-value=8 Score=36.03 Aligned_cols=59 Identities=10% Similarity=-0.127 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI 95 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v 95 (339)
-.+.....++++|+++|++.++||.|.++..-+.+++-.++-.++..|...-++|...+
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~~p~~~v 107 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALNKPLIGV 107 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCCEEec
Confidence 35677888999999999999999999997765554444333333333322113465555
No 205
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=63.54 E-value=9.8 Score=36.67 Aligned_cols=52 Identities=12% Similarity=0.057 Sum_probs=31.9
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHH--HHHHHHHHHHHcCCC--CCccCeEEE
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKL--GSIAIECALKRANVK--PLLVQEVFF 64 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L--~~~A~~~Al~dagl~--~~~Id~i~~ 64 (339)
..|.|.|.+..--........+..+..+ ...++++|++++|++ ++|||.+-+
T Consensus 238 ~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei 293 (398)
T PRK06157 238 DPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEV 293 (398)
T ss_pred CCeEEEEEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEE
Confidence 5688999865421111000111222222 567999999999997 699998765
No 206
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=62.69 E-value=24 Score=34.31 Aligned_cols=78 Identities=17% Similarity=0.078 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCC-CCcceeee----c-ccCccHHHHHHHHHHH
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIP-NSVVCTTI----N-KVCSSGMKAVMLAAQS 112 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~-~~~~~~~v----~-~~cas~~~al~~A~~~ 112 (339)
-..+++++||+++|+.+++||.+..- .++... ...-..-+...+|-. ...|...+ . ..++++...+..+...
T Consensus 290 ~~~~ai~~AL~~agi~p~dId~i~~H-gtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~ 368 (425)
T PRK06501 290 PAIGAIRAALADAGLTPEQIDYINAH-GTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLT 368 (425)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEec-CccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHH
Confidence 35688999999999999999998852 222211 111112233333321 11222211 1 2356777777778888
Q ss_pred HHcCCC
Q 019555 113 IQLGIN 118 (339)
Q Consensus 113 I~sG~~ 118 (339)
++.|..
T Consensus 369 l~~~~i 374 (425)
T PRK06501 369 IQTGRL 374 (425)
T ss_pred HhcCcC
Confidence 888863
No 207
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=61.60 E-value=26 Score=33.36 Aligned_cols=25 Identities=16% Similarity=-0.016 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
-...+++++|+++|++++|||.+.+
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei 283 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEI 283 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeee
Confidence 4578999999999999999999865
No 208
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=61.09 E-value=23 Score=34.36 Aligned_cols=68 Identities=10% Similarity=-0.005 Sum_probs=40.0
Q ss_pred HHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeeccc--------CccHHHHHHHH-HHH
Q 019555 42 SIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKV--------CSSGMKAVMLA-AQS 112 (339)
Q Consensus 42 ~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~--------cas~~~al~~A-~~~ 112 (339)
..|++++|+++|++++|||.+.+-.... .........+|++. ..+.++.+ ++|+...+..+ .++
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~eaFa-----~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL 390 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEAFA-----VVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDEL 390 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchHHH-----HHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHH
Confidence 5789999999999999999988532111 11223445677753 22233332 45555555544 444
Q ss_pred HHcC
Q 019555 113 IQLG 116 (339)
Q Consensus 113 I~sG 116 (339)
.+.|
T Consensus 391 ~~~g 394 (417)
T PRK06025 391 ERRG 394 (417)
T ss_pred HHhC
Confidence 4455
No 209
>PRK09604 UGMP family protein; Validated
Probab=59.10 E-value=12 Score=35.25 Aligned_cols=49 Identities=18% Similarity=-0.057 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCc----HHHHHHHHcCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQA----PARQAALGAGI 86 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~----~~~~ia~~lgl 86 (339)
.+.....++++|+++|+++++||.|.++..-+...+-. .+..++..+++
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i 104 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK 104 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC
Confidence 56777889999999999999999999976544433322 34444444444
No 210
>PLN03169 chalcone synthase family protein; Provisional
Probab=58.05 E-value=31 Score=33.16 Aligned_cols=46 Identities=13% Similarity=0.040 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCC
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS 89 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~ 89 (339)
..+.++++|+++|+.+++||.+.+. ..+ .+..+-..+...||++++
T Consensus 283 ~~~~i~~~L~~~gl~~~did~~~~v-~Hq--~n~~il~~v~~~Lgl~~e 328 (391)
T PLN03169 283 IEGFCKKLMKKAGLVEKDYNDLFWA-VHP--GGPAILNRLEKKLKLAPE 328 (391)
T ss_pred HHHHHHHHHHHcCCCCCCCCcceEE-ecC--CCHHHHHHHHHHcCCCHH
Confidence 3445688899999999999855432 222 234566788899999753
No 211
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=57.55 E-value=46 Score=31.97 Aligned_cols=94 Identities=15% Similarity=0.004 Sum_probs=52.3
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceee
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT 94 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~ 94 (339)
+.|+|.+...... . ....-...|+++||+.+|++++|||.+-+--... ...-...+.+|+... .+.
T Consensus 268 ~~i~g~~~~~~~~------~-~~~~~~~~a~~~al~~agl~~~did~~ei~d~F~-----~~~l~~~e~lg~~~~--pvN 333 (387)
T PRK07850 268 ARIVAQALVGAEP------Y-YHLDGPVQATAKVLEKAGMKIGDIDLVEINEAFA-----SVVLSWAQVHEPDMD--KVN 333 (387)
T ss_pred EEEEEEEEeccCc------h-hhcchHHHHHHHHHHHcCCCHHHcCeeeecccch-----HHHHHHHHHcCCCCC--CcC
Confidence 7777776432111 1 1123447899999999999999999887632211 011112255666421 222
Q ss_pred ec--------ccCccHHHHHHHHHHHHHcCCCceEE
Q 019555 95 IN--------KVCSSGMKAVMLAAQSIQLGINDIVV 122 (339)
Q Consensus 95 v~--------~~cas~~~al~~A~~~I~sG~~~~vL 122 (339)
.+ -.++++...+..++..++....+..|
T Consensus 334 ~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~g~ 369 (387)
T PRK07850 334 VNGGAIALGHPVGSTGARLITTALHELERTDKSTAL 369 (387)
T ss_pred CCCchhhcCCCcchhHHHHHHHHHHHHHhcCCCeEE
Confidence 21 13446777777777777644334443
No 212
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=56.81 E-value=54 Score=31.67 Aligned_cols=42 Identities=19% Similarity=0.003 Sum_probs=29.6
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
.|+|.+.+..... ... .-...|+++||+++|++++|||.+-+
T Consensus 280 ~i~g~~~~~~~~~------~~~-~~~~~a~~~a~~~agl~~~did~~ei 321 (401)
T PRK08131 280 RILSSAAAGVEPR------IMG-IGPVEAIKKALARAGLTLDDMDIIEI 321 (401)
T ss_pred EEEEEEEeccCCc------ccc-chHHHHHHHHHHHcCCCHHHCCeehh
Confidence 6788776643211 111 23468999999999999999998774
No 213
>PRK08304 stage V sporulation protein AD; Validated
Probab=56.02 E-value=8.3 Score=36.07 Aligned_cols=26 Identities=35% Similarity=0.452 Sum_probs=23.4
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeecc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEA 330 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~ 330 (339)
.+|+++||+++|++++|||++-.-|.
T Consensus 61 ~eAa~~ALekAGI~~~DID~lI~Gdl 86 (337)
T PRK08304 61 EDAIQQALQKANLKKSDIDYLLAGDL 86 (337)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 68999999999999999999977663
No 214
>PRK14878 UGMP family protein; Provisional
Probab=55.83 E-value=13 Score=34.75 Aligned_cols=48 Identities=17% Similarity=0.087 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCC----cHHHHHHHHcCC
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ----APARQAALGAGI 86 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~----~~~~~ia~~lgl 86 (339)
+....+++++|+++|+++++||.|.++..-+...+- ..++.++..+++
T Consensus 46 ~~l~~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~ 97 (323)
T PRK14878 46 EVAPELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK 97 (323)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC
Confidence 345588999999999999999999987654433322 235556666654
No 215
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=54.40 E-value=9.8 Score=35.82 Aligned_cols=25 Identities=32% Similarity=0.246 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
=+..|.++||++||+.|++||+|-.
T Consensus 302 Ga~~am~raL~~Agl~pe~i~YvNA 326 (440)
T KOG1394|consen 302 GAVLAMERALKDAGLSPEDIDYVNA 326 (440)
T ss_pred hHHHHHHHHHHHcCCChhhcCeeec
Confidence 4567889999999999999999873
No 216
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=53.22 E-value=25 Score=27.71 Aligned_cols=59 Identities=19% Similarity=0.156 Sum_probs=35.3
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCC
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGI 86 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl 86 (339)
++++|+|. |+ + ...+...++++++|++.++++..|+.+..-..-. ....-..++..+|+
T Consensus 1 ~l~~GiGc----rr-----~-~~~~~i~~ai~~~l~~~~~~~~~i~~iasi~~K~---~E~~l~~~A~~l~~ 59 (121)
T PF01890_consen 1 NLVLGIGC----RR-----G-APAEEIEEAIEQALAEAGLSPRSIAAIASIDIKA---DEPGLLELAEELGI 59 (121)
T ss_dssp -EEEEEEE-----S-----S---HHHHHHHHHHHHHHCT--GGGEEEEEESSSSS-----HHHHHHHHHCTS
T ss_pred CEEEEeCc----CC-----C-CCHHHHHHHHHHHHHHcCCChhhccEEEeccccC---CCHHHHHHHHHhCC
Confidence 36788885 22 1 3456668999999999999999998887532221 12233456666665
No 217
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=53.09 E-value=32 Score=32.49 Aligned_cols=45 Identities=16% Similarity=0.045 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHc--CCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 019555 39 KLGSIAIECALKRA--NVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN 88 (339)
Q Consensus 39 ~L~~~A~~~Al~da--gl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~ 88 (339)
+...++++++|+++ |+++++||.+++=. .+...-..+...||+++
T Consensus 259 ~~~~~~i~~~L~~~~~g~~~~did~~~~H~-----~~~~i~~~v~~~lgl~~ 305 (361)
T cd00831 259 KNLERVLRKLLARLGIGLFKLAFDHWCVHP-----GGRAVLDAVEKALGLSP 305 (361)
T ss_pred HHHHHHHHHHhccccCCCccccceEEEECC-----CChHHHHHHHHHcCCCH
Confidence 35566788999999 99999999888622 13345667889999974
No 218
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=52.59 E-value=12 Score=35.27 Aligned_cols=53 Identities=23% Similarity=0.162 Sum_probs=37.8
Q ss_pred CCceEEEeeccCccccc-CC-CCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 12 ARDVCIVGVARTPMGGF-LG-SLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~-~~-~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
.|+|--=.-+..-|+++ |+ .+...+..||..+...+++++|+++.+|+|.++=
T Consensus 38 TRdVRpPk~gEevFG~Tl~g~eLtresV~elV~dtl~e~~k~A~l~i~DL~FVVR 92 (445)
T TIGR03285 38 TRDVRPPRSGEEVFGKTVWGVELTRESVAELVKDTLKESLKKAGLDIDDLDFVVR 92 (445)
T ss_pred eccCCCCCCCCcccceeecCccccHHHHHHHHHHHHHHHHHHcCCChhhccEEEe
Confidence 34443333444456663 22 3556788999999999999999999999998873
No 219
>PLN03170 chalcone synthase; Provisional
Probab=52.17 E-value=47 Score=32.06 Aligned_cols=46 Identities=17% Similarity=0.014 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCC
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS 89 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~ 89 (339)
+.....++++|+++|+..++||.+++= + .+..+-..+...||++++
T Consensus 281 ~~i~~~v~~~L~~~gl~~~di~~~v~H---q--gg~~il~~v~~~Lgl~~~ 326 (401)
T PLN03170 281 KNIERSLEEAFKPLGITDYNSIFWVAH---P--GGPAILDQVEAKVGLEKE 326 (401)
T ss_pred HHHHHHHHHHHHhcCCCccccCeEEec---C--CcHHHHHHHHHHcCCChH
Confidence 344457778888899998888886641 1 144566778899999754
No 220
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=50.63 E-value=13 Score=29.58 Aligned_cols=25 Identities=24% Similarity=0.179 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEE
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFG 65 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g 65 (339)
...|++++|+++|++++|||.+=+-
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~ 48 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEIN 48 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE-
T ss_pred HHHHHHHHHHHhCCCccccchhhcc
Confidence 3678999999999999999988763
No 221
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=50.63 E-value=97 Score=29.78 Aligned_cols=42 Identities=19% Similarity=-0.062 Sum_probs=29.6
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
.|+|.+...... +... .-...|+++||+++|++++|||.+-+
T Consensus 273 ~i~g~~~~~~~~------~~~~-~~~~~a~~~al~~agl~~~did~~ei 314 (391)
T PRK07661 273 KFRSFAVAGVPP------EVMG-IGPIAAIPKALKLAGLELSDIGLFEL 314 (391)
T ss_pred EEEEEEEecCCC------cccc-hHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 677777653211 1111 24478999999999999999999884
No 222
>PLN03168 chalcone synthase; Provisional
Probab=50.35 E-value=13 Score=35.72 Aligned_cols=28 Identities=25% Similarity=0.115 Sum_probs=25.1
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeecccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAFS 332 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F~ 332 (339)
.+|+++||+++|++++|||++-+..|.+
T Consensus 106 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg 133 (389)
T PLN03168 106 AEAAQKAIKEWGGRKSDITHIVFATTSG 133 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCC
Confidence 5899999999999999999998877755
No 223
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=49.39 E-value=20 Score=33.87 Aligned_cols=55 Identities=16% Similarity=0.088 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC----CcHHHHHHHHcCCCCCcceeeec
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG----QAPARQAALGAGIPNSVVCTTIN 96 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~----~~~~~~ia~~lgl~~~~~~~~v~ 96 (339)
.+-....++++|+++|+.+++||.|.++..-+...+ -..+.-++..+++ |.+-++
T Consensus 50 ~~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~LrVG~~~Ak~LA~a~~~----PligV~ 108 (345)
T PTZ00340 50 REHILSLVKEALEEAKITPSDISLICYTKGPGMGAPLSVGAVVARTLSLLWGK----PLVGVN 108 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhHHHHHHHHHHHHHHcCC----CEeecc
Confidence 456677889999999999999999998654433222 2345555555544 555443
No 224
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=49.31 E-value=25 Score=32.97 Aligned_cols=55 Identities=20% Similarity=0.071 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCC-----cHHHHHHHHcCCCCCcceeeecc
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ-----APARQAALGAGIPNSVVCTTINK 97 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~-----~~~~~ia~~lgl~~~~~~~~v~~ 97 (339)
.+-....+++||+++|++.+|||.|.+... +...+. ..++.++..++ +|.+-|+.
T Consensus 51 ~e~i~~li~~al~eA~~~~~dID~IA~T~g-PGL~gaL~VG~~~Ak~LA~a~~----kPli~VnH 110 (342)
T COG0533 51 VENIPPLIEEALAEAGVSLEDIDAIAVTAG-PGLGGALLVGATAAKALALALN----KPLIPVNH 110 (342)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCEEEEecC-CCchhHHHHHHHHHHHHHHHhC----CCEeecch
Confidence 355667899999999999999999998543 322222 35556666664 45555543
No 225
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=49.15 E-value=16 Score=34.09 Aligned_cols=47 Identities=23% Similarity=0.123 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCC----cHHHHHHHHcCC
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ----APARQAALGAGI 86 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~----~~~~~ia~~lgl 86 (339)
.....++++|+++|+++++||.|.++..-+...+- ..++.++..+++
T Consensus 48 ~l~~~i~~~l~~~~~~~~did~Iavt~gPg~~~~l~vg~~~ak~la~~~~~ 98 (322)
T TIGR03722 48 VAPKLIKEALEEAGVSLEDIDAVAFSQGPGLGPCLRVGATAARALALKLNK 98 (322)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCCchHHhHHHHHHHHHHHHHHhCC
Confidence 35566999999999999999999987643322221 234455555544
No 226
>PF03880 DbpA: DbpA RNA binding domain ; InterPro: IPR005580 This RNA binding domain is found at the C terminus of a number of DEAD helicase proteins [].; PDB: 2G0C_A 3MOJ_B.
Probab=48.02 E-value=8.9 Score=27.30 Aligned_cols=35 Identities=20% Similarity=0.268 Sum_probs=24.5
Q ss_pred cchHHHHHHHHHHcCCCCCCCcEEEeecccccccc
Q 019555 302 TAPSLAIPKAIANAGLEASQIDYYEINEAFSVRNH 336 (339)
Q Consensus 302 ~~~~~a~~~al~~agl~~~DId~~~~hd~F~~~~l 336 (339)
..+..-+....+.+|++.+||.-++++|-||..++
T Consensus 13 ~~~~~iv~~i~~~~gi~~~~IG~I~I~~~~S~vev 47 (74)
T PF03880_consen 13 LTPRDIVGAICNEAGIPGRDIGRIDIFDNFSFVEV 47 (74)
T ss_dssp --HHHHHHHHHTCTTB-GGGEEEEEE-SS-EEEEE
T ss_pred CCHHHHHHHHHhccCCCHHhEEEEEEeeeEEEEEE
Confidence 34556666666778999999999999999998765
No 227
>PRK06059 lipid-transfer protein; Provisional
Probab=47.45 E-value=17 Score=34.99 Aligned_cols=44 Identities=20% Similarity=0.092 Sum_probs=30.7
Q ss_pred EEEEeeEEeeeCCC--ccccchHHHHHHHHHHcCCCCCCCcEEEee
Q 019555 285 AKIRGFADAAQAPE--WFTTAPSLAIPKAIANAGLEASQIDYYEIN 328 (339)
Q Consensus 285 ~~i~g~~~~~~~~~--~~~~~~~~a~~~al~~agl~~~DId~~~~h 328 (339)
+.|.|++.+.-.+. ....-...+++++|+++||+++|||.+-+.
T Consensus 6 v~Ivg~~~t~~~r~~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~ 51 (399)
T PRK06059 6 VYILGAGMHPWGKWGRDFVEYGVVAARAALADAGLDWRDVQLVVGA 51 (399)
T ss_pred EEEEEecccccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 67777777643221 111223689999999999999999998654
No 228
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=46.85 E-value=28 Score=32.56 Aligned_cols=45 Identities=20% Similarity=0.359 Sum_probs=31.9
Q ss_pred EEEEeeEEeee-CCCcccc-----chHHHHHHHHHHcCC-CCCCCcEEEeec
Q 019555 285 AKIRGFADAAQ-APEWFTT-----APSLAIPKAIANAGL-EASQIDYYEINE 329 (339)
Q Consensus 285 ~~i~g~~~~~~-~~~~~~~-----~~~~a~~~al~~agl-~~~DId~~~~hd 329 (339)
..-.|.+++.. .|...+. ..+.+++.++..+|| +|+|+.|+++-=
T Consensus 109 ~Lavg~a~T~~~~PEeiGr~aqV~~vA~aV~~aM~~AGI~dpaDVH~VQvKc 160 (365)
T PF09663_consen 109 RLAVGVARTRDFLPEEIGRMAQVEEVAAAVRAAMADAGITDPADVHFVQVKC 160 (365)
T ss_pred ceEEEEecCCCCChHHcCcHHHHHHHHHHHHHHHHHcCCCChhheeeEEecC
Confidence 34566666644 2344442 236899999999999 799999998753
No 229
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=46.30 E-value=14 Score=32.68 Aligned_cols=25 Identities=20% Similarity=0.396 Sum_probs=21.7
Q ss_pred HHHHHHHHHcCCCCCCCcEEEeecccccc
Q 019555 306 LAIPKAIANAGLEASQIDYYEINEAFSVR 334 (339)
Q Consensus 306 ~a~~~al~~agl~~~DId~~~~hd~F~~~ 334 (339)
.-++++|++++++.+|||.+ ||+--
T Consensus 55 ~Lv~~al~ea~v~~~diD~i----cyTKG 79 (336)
T KOG2708|consen 55 GLVKQALEEAGVTSDDIDCI----CYTKG 79 (336)
T ss_pred HHHHHHHHHcCCChhhCCEE----EEcCC
Confidence 57899999999999999999 77643
No 230
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=45.84 E-value=1.4e+02 Score=28.69 Aligned_cols=95 Identities=15% Similarity=0.040 Sum_probs=51.4
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHH--HHHcCCCCCc-c
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQA--ALGAGIPNSV-V 91 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~i--a~~lgl~~~~-~ 91 (339)
+.|+|.+....... ... .-...+++++|+++|++++|||.+-+--. .....+ .+.||+-+.+ .
T Consensus 263 a~I~g~~~~~~~~~------~~~-~~~~~a~~~al~~AGi~p~DId~~Ei~da-------Fa~~~l~~~e~lg~~~~g~~ 328 (385)
T TIGR02445 263 ARIRSMAVAGCDPS------IMG-YGPVPATQKALKRAGLSISDIDVFELNEA-------FAAQALPCLKDLGLLDKMDE 328 (385)
T ss_pred EEEEEEEEcCCCCc------ccc-hhHHHHHHHHHHHcCCCHHHcCEEEEccc-------cHHHHHHHHHHcCCCCCCCC
Confidence 67777766421111 111 13467899999999999999998765221 112222 2556652110 1
Q ss_pred eeeec--------ccCccHHHHHHHHHHHHHcCCCceEEE
Q 019555 92 CTTIN--------KVCSSGMKAVMLAAQSIQLGINDIVVA 123 (339)
Q Consensus 92 ~~~v~--------~~cas~~~al~~A~~~I~sG~~~~vLv 123 (339)
.+.++ -.++||...+....+.++....++.|+
T Consensus 329 ~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~~~~~~Gl~ 368 (385)
T TIGR02445 329 KVNLNGGAIALGHPLGCSGARISTTLLNLMEQKDATFGLA 368 (385)
T ss_pred CcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCCCeEEE
Confidence 11111 125566777777777776533444443
No 231
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=45.56 E-value=66 Score=30.89 Aligned_cols=76 Identities=18% Similarity=0.109 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecc--------cCccHHHHHHHHHHH
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK--------VCSSGMKAVMLAAQS 112 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~--------~cas~~~al~~A~~~ 112 (339)
...++++||+++|++++|||.+-+-.... ...-...+.||+.+ +.+..+. .++|+..-+..+...
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d~f~-----~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gatG~~~v~e~~~q 366 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINEAFA-----VVVLYAIKELGLDP--ETVNIKGGAIAIGHPLGATGARIVGTLARQ 366 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecccch-----HHHHHHHHHhCCCc--cccCCCCCHHHcCCCccchHHHHHHHHHHH
Confidence 46789999999999999999887532211 11112235577642 1222221 244556666666666
Q ss_pred HHcCCCceEEE
Q 019555 113 IQLGINDIVVA 123 (339)
Q Consensus 113 I~sG~~~~vLv 123 (339)
++....++.|+
T Consensus 367 L~~~~~~~gl~ 377 (394)
T PRK06445 367 LQIKGKDYGVA 377 (394)
T ss_pred HHhcCCCEEEE
Confidence 65444455554
No 232
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=45.21 E-value=83 Score=38.04 Aligned_cols=101 Identities=15% Similarity=0.114 Sum_probs=58.6
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCC-cHHHHHHHHcCCCC----Cc
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ-APARQAALGAGIPN----SV 90 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~-~~~~~ia~~lgl~~----~~ 90 (339)
.|.|.+.+--++..+. ..-+..- -.+++++||+++|++|++||+|-. ..++...+. .=..-+...+|-.. .+
T Consensus 294 vI~G~g~~~DG~~~~i-taP~~~g-q~~~i~~Al~~Agi~p~~I~yIea-HGTGT~~gD~~E~~Al~~vf~~~~~~~~~~ 370 (2582)
T TIGR02813 294 VIKGVGASSDGKFKSI-YAPRPEG-QAKALKRAYDDAGFAPHTCGLIEA-HGTGTAAGDVAEFGGLVSVFSQDNDQKQHI 370 (2582)
T ss_pred EEEEEEEcCCCCCCCC-cCCCHHH-HHHHHHHHHHHcCCCHHHCCEEEe-cCCCCCCCCHHHHHHHHHHhcccccCCCCc
Confidence 4678877666664321 1123333 368999999999999999998763 333332221 11223333333210 01
Q ss_pred ceee----e-cccCccHHHHHHHHHHHHHcCCCc
Q 019555 91 VCTT----I-NKVCSSGMKAVMLAAQSIQLGIND 119 (339)
Q Consensus 91 ~~~~----v-~~~cas~~~al~~A~~~I~sG~~~ 119 (339)
+.-. + ...+++|...+..+..+++.|..-
T Consensus 371 ~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iP 404 (2582)
T TIGR02813 371 ALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLP 404 (2582)
T ss_pred eeeccccccccchHhHHHHHHHHHHHHHhcCCcC
Confidence 1111 1 234778889999999999988643
No 233
>PLN03173 chalcone synthase; Provisional
Probab=45.03 E-value=16 Score=35.13 Aligned_cols=27 Identities=26% Similarity=0.129 Sum_probs=23.6
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
.+|+++||+++|++++|||++-+..|-
T Consensus 107 ~~Aa~~AL~~ag~~~~dId~li~~t~t 133 (391)
T PLN03173 107 KEAAAKAIKEWGQPKSKITHLVFCTTS 133 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccC
Confidence 589999999999999999998776653
No 234
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=44.12 E-value=64 Score=30.99 Aligned_cols=24 Identities=13% Similarity=-0.079 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEE
Q 019555 41 GSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
...|+++||+++|++++|||.+-+
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~ 316 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEA 316 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEe
Confidence 357999999999999999999886
No 235
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=43.97 E-value=55 Score=31.63 Aligned_cols=23 Identities=17% Similarity=-0.015 Sum_probs=21.1
Q ss_pred HHHHHHHHHHcCCCCCccCeEEE
Q 019555 42 SIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 42 ~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
..|+++||+++|++++|||.+-+
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei 325 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFEL 325 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEe
Confidence 56999999999999999999885
No 236
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=43.51 E-value=25 Score=33.85 Aligned_cols=25 Identities=16% Similarity=-0.068 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
-...|+++||+++|++++|||.+-+
T Consensus 291 ~~~~a~~~Al~~AGl~p~DID~~ei 315 (392)
T PRK06633 291 APVPASQKALSKAGWSVNDLEVIEV 315 (392)
T ss_pred HHHHHHHHHHHHcCCCHHHcCeeeh
Confidence 3478899999999999999999874
No 237
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=43.12 E-value=55 Score=31.61 Aligned_cols=75 Identities=16% Similarity=0.056 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHH--HHHHcCCCCC--cceeeecc--------cCccHHHHHHH
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQ--AALGAGIPNS--VVCTTINK--------VCSSGMKAVML 108 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~--ia~~lgl~~~--~~~~~v~~--------~cas~~~al~~ 108 (339)
...|+++||+++|++++|||.+-+--. ..... ..+.||+.+. .+ +.++. .++||..-+..
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~d~-------f~~~~l~~~e~lg~~~~~~~~-vN~~GG~la~Ghp~gatG~~~v~e 371 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELNEA-------FAAQVLAVLKEWGFGADDEER-LNVNGSGISLGHPVGATGGRILAT 371 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeeccH-------HHHHHHHHHHHhCcCcccCCC-cCCCCCHHhhCCChhhhHHHHHHH
Confidence 368899999999999999999874221 11111 2244665321 11 22221 24456666677
Q ss_pred HHHHHHcCCCceEEE
Q 019555 109 AAQSIQLGINDIVVA 123 (339)
Q Consensus 109 A~~~I~sG~~~~vLv 123 (339)
++..++....++.|+
T Consensus 372 ~~~qL~~~~~~~gl~ 386 (404)
T PRK06205 372 LLRELQRRQARYGLE 386 (404)
T ss_pred HHHHHHhcCCCeEEE
Confidence 777776544555554
No 238
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=42.90 E-value=38 Score=33.03 Aligned_cols=27 Identities=15% Similarity=0.107 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHcCCC--CCccCeEEEE
Q 019555 39 KLGSIAIECALKRANVK--PLLVQEVFFG 65 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~--~~~Id~i~~g 65 (339)
+....|+++|++++|++ ++|||.+-+-
T Consensus 293 ~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~ 321 (430)
T PRK06365 293 RAGRMAAKEAYEMAGITDPLNDLDLIELH 321 (430)
T ss_pred HHHHHHHHHHHHHcCCCCCHHHCCEEEee
Confidence 34568999999999997 7999988763
No 239
>PLN03172 chalcone synthase family protein; Provisional
Probab=42.88 E-value=20 Score=34.56 Aligned_cols=27 Identities=26% Similarity=0.129 Sum_probs=23.4
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
.+|++++|+++|++++|||++-+..|-
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~ii~~t~t 133 (393)
T PLN03172 107 KEAAAKAIKEWGQPKSKITHLVFCTTS 133 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccC
Confidence 589999999999999999998766553
No 240
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=42.84 E-value=43 Score=32.21 Aligned_cols=52 Identities=15% Similarity=0.054 Sum_probs=32.0
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCC--CccCeEEE
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKP--LLVQEVFF 64 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~--~~Id~i~~ 64 (339)
.+.|+|.|.+.. .........+.........|+++|++.+|+++ +|||.+-+
T Consensus 236 ~~~v~I~g~~~~-~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei 289 (392)
T PRK06065 236 DTPVWVEGVGWT-LDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEP 289 (392)
T ss_pred CCCEEEEEEEEe-cCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEe
Confidence 456888888763 11111111112222334679999999999984 89998765
No 241
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=42.76 E-value=38 Score=32.49 Aligned_cols=49 Identities=16% Similarity=0.051 Sum_probs=30.8
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCC--CCccCeEEE
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVK--PLLVQEVFF 64 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~--~~~Id~i~~ 64 (339)
+.|.|.+...-.......+... ......|+++|++.+|++ ++|||.+-+
T Consensus 232 ~~I~g~~~~~~~~~~~~~~~~~-~~~~~~a~~~a~~~Agi~~p~~Did~~el 282 (386)
T PRK08313 232 AWIHGTAMRTEPLAFAGRDQVN-PQAGRDAAAALWKAAGITDPRDEIDVAEI 282 (386)
T ss_pred eEEEEEEEEecCcccccccccc-cHHHHHHHHHHHHHcCCCCChhhCCEEEe
Confidence 4777887642111111112222 355678999999999997 699997654
No 242
>PLN02192 3-ketoacyl-CoA synthase
Probab=42.71 E-value=19 Score=35.95 Aligned_cols=27 Identities=19% Similarity=0.166 Sum_probs=23.0
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeecccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAFS 332 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F~ 332 (339)
..|++++|+++|++++|||++-+. |.+
T Consensus 181 ~~Aa~~aL~kaGi~p~DIDiLIv~-~S~ 207 (511)
T PLN02192 181 FGAIDQLLAKTSVKPKDIGILIVN-CSL 207 (511)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEE-CCC
Confidence 479999999999999999998665 544
No 243
>PLN03171 chalcone synthase-like protein; Provisional
Probab=42.27 E-value=20 Score=34.60 Aligned_cols=28 Identities=29% Similarity=0.211 Sum_probs=23.9
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeecccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAFS 332 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F~ 332 (339)
..|++++|+++|++++|||++-+..+.+
T Consensus 113 ~~Aa~~aL~~ag~~~~dId~li~~t~t~ 140 (399)
T PLN03171 113 AEAAKKAIAEWGRPAADITHLVVTTNSG 140 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCC
Confidence 5899999999999999999997754443
No 244
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=42.13 E-value=17 Score=35.86 Aligned_cols=29 Identities=10% Similarity=0.178 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHcCCCCCCCcEEEeecccc
Q 019555 304 PSLAIPKAIANAGLEASQIDYYEINEAFS 332 (339)
Q Consensus 304 ~~~a~~~al~~agl~~~DId~~~~hd~F~ 332 (339)
.+.|++++|+++|++++|||.+.+--..+
T Consensus 57 A~~AA~~aL~~agid~~~IdllivaTeT~ 85 (459)
T PLN02577 57 SLTVVKSLLEKYNIDPKQIGRLEVGSETV 85 (459)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCC
Confidence 47899999999999999999998754443
No 245
>PLN02287 3-ketoacyl-CoA thiolase
Probab=42.09 E-value=42 Score=33.01 Aligned_cols=24 Identities=21% Similarity=0.137 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEE
Q 019555 41 GSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
...|+++||+++|++++|||.+-+
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei 356 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEI 356 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEe
Confidence 468999999999999999999854
No 246
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=41.92 E-value=80 Score=30.36 Aligned_cols=23 Identities=30% Similarity=0.251 Sum_probs=20.8
Q ss_pred HHHHHHHHHHcCCCCCccCeEEE
Q 019555 42 SIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 42 ~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
..++++||+++|++++|||.+-+
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei 316 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEI 316 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEe
Confidence 46899999999999999999886
No 247
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=41.55 E-value=46 Score=26.45 Aligned_cols=59 Identities=20% Similarity=0.138 Sum_probs=38.7
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCC
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP 87 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~ 87 (339)
+++|+|. |+ +.+. +...++++++|++.|+.+..|+.+..-..-. .-..-..++..+|++
T Consensus 4 ~~vGIGc----r~-----~~~~-e~i~~ai~~~L~~~~l~~~si~~lasi~~K~---~E~~L~~~A~~lg~p 62 (126)
T PRK07027 4 VALGIGC----RR-----GVPA-EQIEAAIRAALAQRPLASADVRVVATLDLKA---DEAGLLALCARHGWP 62 (126)
T ss_pred EEEeecc----CC-----CCCH-HHHHHHHHHHHHHcCCCHHHhheeEehhhhc---CCHHHHHHHHHhCCC
Confidence 4788875 22 2344 4458899999999999999998877532221 112234667777764
No 248
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=41.33 E-value=78 Score=30.47 Aligned_cols=24 Identities=13% Similarity=-0.072 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEE
Q 019555 40 LGSIAIECALKRANVKPLLVQEVF 63 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~ 63 (339)
-...|+++||+++|++++|||.+-
T Consensus 296 ~~~~a~~~al~~agl~~~Did~~e 319 (397)
T PRK06954 296 APVGAIRKLFEKNGWRAAEVDLFE 319 (397)
T ss_pred hHHHHHHHHHHHcCCCHHHCCEEe
Confidence 346899999999999999999984
No 249
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=41.17 E-value=1.9e+02 Score=27.77 Aligned_cols=76 Identities=13% Similarity=0.067 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCC-cceee----e-cccCccHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS-VVCTT----I-NKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~-~~~~~----v-~~~cas~~~al~~A~~ 111 (339)
+-..+++++||+++|+ ++||.|.. ..++... ...-...+...+|-... .+... + ...++++...+..+..
T Consensus 274 ~~~~~a~~~al~~ag~--~~i~~v~~-hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~ 350 (406)
T PRK08439 274 EGPLRAMKAALEMAGN--PKIDYINA-HGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIM 350 (406)
T ss_pred HHHHHHHHHHHHHcCC--CccCEEEc-cCCcCCCCCHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHH
Confidence 4556899999999998 68887763 2223221 11112233333432111 11111 1 2345666666777777
Q ss_pred HHHcCC
Q 019555 112 SIQLGI 117 (339)
Q Consensus 112 ~I~sG~ 117 (339)
+++.|.
T Consensus 351 ~l~~~~ 356 (406)
T PRK08439 351 AMRDGI 356 (406)
T ss_pred HHhCCe
Confidence 888885
No 250
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=41.17 E-value=22 Score=32.69 Aligned_cols=25 Identities=28% Similarity=0.355 Sum_probs=21.8
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd 329 (339)
..+++++|+++|++|+|||++-++-
T Consensus 88 f~av~~LL~ktgv~p~dIdiLVvnc 112 (290)
T PF08392_consen 88 FGAVDDLLAKTGVKPSDIDILVVNC 112 (290)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEC
Confidence 4799999999999999999876653
No 251
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=40.72 E-value=21 Score=31.59 Aligned_cols=28 Identities=32% Similarity=0.298 Sum_probs=23.4
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeecccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAFS 332 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F~ 332 (339)
.+|++++|+++|++++||+++-.-.|--
T Consensus 105 ~~Aa~~AL~~~g~~~~dIthlv~vs~TG 132 (226)
T PF00195_consen 105 EEAARKALAEAGLDPSDITHLVTVSCTG 132 (226)
T ss_dssp HHHHHHHHHHHTS-GGGECEEEEEESSS
T ss_pred HHHHHHHHHHcCCCCcccceEEEEecCC
Confidence 5899999999999999999998776643
No 252
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=40.41 E-value=72 Score=29.28 Aligned_cols=44 Identities=20% Similarity=0.079 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCC-cHHHHHHHHcCCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ-APARQAALGAGIP 87 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~-~~~~~ia~~lgl~ 87 (339)
.+...++++++|++.|++ ++||.++.-.. +. .....+...|+++
T Consensus 222 ~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~-----~~~~~~~~~~~~l~~~ 266 (324)
T cd00827 222 HKLIAKVVRKALDRAGLS-EDIDYFVPHQP-----NGKKILEAVAKKLGGP 266 (324)
T ss_pred hHHHHHHHHHHHHHcccc-cccceeeccCc-----hHHHHHHHHHHHccch
Confidence 466678888999999999 89997765321 22 4566788888874
No 253
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=39.76 E-value=28 Score=33.53 Aligned_cols=24 Identities=21% Similarity=-0.047 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEE
Q 019555 40 LGSIAIECALKRANVKPLLVQEVF 63 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~ 63 (339)
-...|+++||+++|++++|||.+-
T Consensus 291 ~~~~a~~~al~~agl~~~Did~~e 314 (392)
T PRK07108 291 GPVFAVPKLLKQAGLKVDDIDLWE 314 (392)
T ss_pred hHHHHHHHHHHHcCCCHHHcCchH
Confidence 346899999999999999999876
No 254
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=39.58 E-value=26 Score=35.11 Aligned_cols=31 Identities=26% Similarity=0.194 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecC
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLS 69 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~ 69 (339)
+.....++++|+++|+++++||.|.++..-+
T Consensus 50 ~~l~~~i~~~l~~~~~~~~~id~iav~~gPg 80 (535)
T PRK09605 50 EAIPKVIKEALEEAGLKPEDIDLVAFSQGPG 80 (535)
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEECCCCC
Confidence 3455889999999999999999999875433
No 255
>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues. The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=39.45 E-value=26 Score=33.13 Aligned_cols=53 Identities=21% Similarity=0.110 Sum_probs=37.3
Q ss_pred CCceEEEeeccCccccc-CC-CCCCCCHHHHHHHHHHHHHHHcCCCCC-ccCeEEE
Q 019555 12 ARDVCIVGVARTPMGGF-LG-SLSSVSATKLGSIAIECALKRANVKPL-LVQEVFF 64 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~-~~-~~~~~~~~~L~~~A~~~Al~dagl~~~-~Id~i~~ 64 (339)
.|+|--=.-+..=|+++ |+ .+..++..||..+...+++++|+++.+ |+|.++=
T Consensus 40 TRDVR~Pk~gEevFG~Tl~g~eLTrEsV~elVrdtl~e~~k~A~l~i~~DL~FVVR 95 (448)
T PF09887_consen 40 TRDVRPPKPGEEVFGKTLWGVELTRESVAELVRDTLLESHKKAHLDIKKDLDFVVR 95 (448)
T ss_pred eccCCCCCCCccccceeecCccccHHHHHHHHHHHHHHHHHHcCCCccccceEEEe
Confidence 34443333344456663 22 345678899999999999999999987 8998873
No 256
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=39.17 E-value=23 Score=33.88 Aligned_cols=28 Identities=18% Similarity=0.338 Sum_probs=23.6
Q ss_pred hHHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 304 PSLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 304 ~~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
...+++++|+++|++++|||.+-+...+
T Consensus 26 a~~A~~~AL~dAgl~~~dID~vi~~~~~ 53 (386)
T cd00751 26 GAAVIKALLERAGLDPEEVDDVIMGNVL 53 (386)
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEEecc
Confidence 3689999999999999999998765443
No 257
>PRK12404 stage V sporulation protein AD; Provisional
Probab=39.06 E-value=1.4e+02 Score=27.96 Aligned_cols=89 Identities=10% Similarity=0.052 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCC---------------CcceeeecccCc-cHHH
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN---------------SVVCTTINKVCS-SGMK 104 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~---------------~~~~~~v~~~ca-s~~~ 104 (339)
+.+.+.+-|+|.|.+|++-|.|+.|-.-. .|..+...+...-|+.. +.+++.=.+||+ |...
T Consensus 208 A~dti~~h~~d~~~~~~~yDlI~TGDLg~--vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v 285 (334)
T PRK12404 208 AVDTIEAHLRDRQIDASYYDLIVTGDLGH--VGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATV 285 (334)
T ss_pred HHHHHHHHHHHhCCChhhccEEEEcchHH--HHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHH
Confidence 45667788999999999999999864211 23344444444434321 111111112333 3333
Q ss_pred HHHHHHHHHHcCCCceEEEEccccccC
Q 019555 105 AVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 105 al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
.-..-...++.|+.+.+|+++.-.+-+
T Consensus 286 ~~g~~~~~~~~g~~~rvL~v~TGALlS 312 (334)
T PRK12404 286 TYGHLLNRMKRGELKRILVVATGALLS 312 (334)
T ss_pred HHHHHHHHHhcCCceEEEEEEchhhcC
Confidence 446668889999999999998776554
No 258
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=38.54 E-value=2.1e+02 Score=27.85 Aligned_cols=26 Identities=12% Similarity=-0.083 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEE
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFG 65 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g 65 (339)
....|+++|++.+|++++|||.+-+-
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 44579999999999999999987653
No 259
>PLN02932 3-ketoacyl-CoA synthase
Probab=36.99 E-value=25 Score=34.76 Aligned_cols=28 Identities=21% Similarity=0.248 Sum_probs=23.9
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeecccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAFS 332 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F~ 332 (339)
..|++++|+++|++++|||++-+.-+..
T Consensus 153 ~~Aa~~aL~~agi~p~dId~lIv~tst~ 180 (478)
T PLN02932 153 IGAVDNLFRNTGISPSDIGILVVNSSTF 180 (478)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCC
Confidence 4799999999999999999987665543
No 260
>PLN02377 3-ketoacyl-CoA synthase
Probab=36.29 E-value=26 Score=34.95 Aligned_cols=27 Identities=15% Similarity=0.128 Sum_probs=22.8
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeecccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAFS 332 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F~ 332 (339)
..|++++|+++|++++|||++-+ .|.+
T Consensus 177 ~~A~~~aL~kaGi~p~dID~LVv-~cS~ 203 (502)
T PLN02377 177 FGALDNLFANTNVNPKDIGILVV-NCSL 203 (502)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEE-ECCC
Confidence 47999999999999999999966 4544
No 261
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=35.24 E-value=65 Score=31.25 Aligned_cols=75 Identities=16% Similarity=0.236 Sum_probs=41.0
Q ss_pred CCCHHHHHHHHHHH----HHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHH
Q 019555 34 SVSATKLGSIAIEC----ALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLA 109 (339)
Q Consensus 34 ~~~~~~L~~~A~~~----Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A 109 (339)
|....+|+..|++. +|+++|+++++||.++++-..+ ..+-..-+.++||-|..+.-.+...+++++ .-|
T Consensus 299 DIr~~qlAKaAi~aGi~~Ll~~agi~~~di~~v~lAG~FG----~~l~~~~a~~iGLlP~~~~~kv~~~GN~al---~GA 371 (412)
T PF14574_consen 299 DIREFQLAKAAIRAGIEILLEEAGISPEDIDRVYLAGGFG----NYLDPESAIRIGLLPDVPAEKVRFVGNAAL---AGA 371 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--GGG--EEEEECSS-----SEEEHHHHHHTTSS--S-GGGEEEEC-HHH---HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHccEEEEeCccc----ccCCHHHHhhcCCCCCccccCEEEECcHHH---HHH
Confidence 44556777766654 4788999999999999875443 333445667889865555555554454443 334
Q ss_pred HHHHHc
Q 019555 110 AQSIQL 115 (339)
Q Consensus 110 ~~~I~s 115 (339)
..++.+
T Consensus 372 ~~~Ll~ 377 (412)
T PF14574_consen 372 RMALLS 377 (412)
T ss_dssp HHHHHB
T ss_pred HHHhCC
Confidence 444443
No 262
>PF04422 FrhB_FdhB_N: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; InterPro: IPR007516 Coenzyme F420 hydrogenase (1.12.99.1 from EC) reduces the low-potential two-electron acceptor coenzyme F420. This entry contains the N termini of F420 hydrogenase and dehydrogenase beta subunits [, ]. The N terminus of Methanobacterium formicicum formate dehydrogenase beta chain (1.2.1.2 from EC, P06130 from SWISSPROT) is also represented in this entry []. This region is often found in association with the 4Fe-4S binding domain, fer4 (IPR001450 from INTERPRO), and the C terminus IPR007525 from INTERPRO.
Probab=35.03 E-value=61 Score=23.51 Aligned_cols=31 Identities=29% Similarity=0.247 Sum_probs=26.1
Q ss_pred cccCccHHHHHHHHHHHHHcCCCceEEEEcc
Q 019555 96 NKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126 (339)
Q Consensus 96 ~~~cas~~~al~~A~~~I~sG~~~~vLv~g~ 126 (339)
...+++|...=..+..+|++|..|.|++++.
T Consensus 14 r~~~~sGG~vTaLl~~lLe~g~Vd~vv~~~~ 44 (82)
T PF04422_consen 14 REKSQSGGVVTALLAYLLESGLVDGVVVVGR 44 (82)
T ss_pred cccCCcHHHHHHHHHHHHHcCCceEEEEEee
Confidence 3467788877788899999999999999884
No 263
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=34.67 E-value=43 Score=29.67 Aligned_cols=29 Identities=14% Similarity=0.003 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEee
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNV 67 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~ 67 (339)
+-...-++++|++++++.+|||.+++...
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icyTKG 79 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICYTKG 79 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEcCC
Confidence 34455679999999999999999998543
No 264
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=33.52 E-value=30 Score=33.27 Aligned_cols=28 Identities=18% Similarity=0.340 Sum_probs=24.3
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeecccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAFS 332 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F~ 332 (339)
..+++++|+++|++++|||.+-+-..++
T Consensus 31 ~~A~~~aL~~agl~~~dID~vi~g~~~~ 58 (393)
T PRK08235 31 GIAIKEALERANVSAEDVEEVIMGTVLQ 58 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccc
Confidence 6899999999999999999987765554
No 265
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=33.33 E-value=42 Score=31.31 Aligned_cols=49 Identities=22% Similarity=0.120 Sum_probs=31.9
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCC-CCCccCeEEE
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANV-KPLLVQEVFF 64 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl-~~~~Id~i~~ 64 (339)
-.-||.++|+-=.. ...-...-.++.++|+++|+.++|+ +|.|+-++-+
T Consensus 110 rLavg~a~T~~~~P-EeiGr~aqV~~vA~aV~~AM~~AGI~dpaDVH~VQv 159 (366)
T TIGR02714 110 RLTVGVAFTRQFLP-EEIGRTAQITETAAAVKRAMRDAGIADPADVHFVQV 159 (366)
T ss_pred ceEEEeecCCCCCh-HHcCcHHHHHHHHHHHHHHHHHcCCCChhHeeEEEe
Confidence 34577777763221 0111234468899999999999999 6777666554
No 266
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=32.96 E-value=1.8e+02 Score=27.26 Aligned_cols=89 Identities=12% Similarity=0.064 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCC--------------CCcceeeecccCc-cHHHH
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP--------------NSVVCTTINKVCS-SGMKA 105 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~--------------~~~~~~~v~~~ca-s~~~a 105 (339)
+.+.+.+-|+|.|.+|++-|.|+.|-.-. .|..+...+...-|+. .+.+++.=.+||+ |....
T Consensus 204 a~dti~~h~~d~~~~~~~yd~i~tgdlg~--vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~ 281 (327)
T TIGR02845 204 AADTIEAHFKDTGRSVDDYDLIVTGDLAR--VGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVT 281 (327)
T ss_pred HHHHHHHHHHHcCCChhhccEEEecchHH--HHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHH
Confidence 45667788999999999999999864211 2333444443333321 1222111123443 23334
Q ss_pred HHHHHHHHHcCCCceEEEEccccccC
Q 019555 106 VMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 106 l~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
-.+-...++.|+.+.+|++..-.+-+
T Consensus 282 ~~~~~~~~~~g~~~r~l~v~tgalls 307 (327)
T TIGR02845 282 YGHILKEMLRGKLKKVLVVATGALLS 307 (327)
T ss_pred HHHHHHHHhcCcceEEEEEEchhhcC
Confidence 45667889999999999998776554
No 267
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=32.52 E-value=76 Score=29.99 Aligned_cols=47 Identities=19% Similarity=0.124 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCC----CCCcHHHHHHHHcCCC
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSAN----LGQAPARQAALGAGIP 87 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~----~~~~~~~~ia~~lgl~ 87 (339)
.-.+++++|++||+.|+|+|.|.+...-+.. .|-+.+..++..+..|
T Consensus 86 i~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 86 IPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 3567899999999999999999975432221 1234566666666443
No 268
>PRK12342 hypothetical protein; Provisional
Probab=31.99 E-value=1.3e+02 Score=27.16 Aligned_cols=42 Identities=14% Similarity=0.142 Sum_probs=32.4
Q ss_pred HHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 019555 42 SIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN 88 (339)
Q Consensus 42 ~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~ 88 (339)
..+..+++++-+ .|.|++|....+...+..+.+++..||++.
T Consensus 98 a~~La~~i~~~~-----~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~ 139 (254)
T PRK12342 98 AKALAAAIEKIG-----FDLLLFGEGSGDLYAQQVGLLLGELLQLPV 139 (254)
T ss_pred HHHHHHHHHHhC-----CCEEEEcCCcccCCCCCHHHHHHHHhCCCc
Confidence 455556666533 789999988887777788899999999973
No 269
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=31.55 E-value=43 Score=31.48 Aligned_cols=26 Identities=31% Similarity=0.385 Sum_probs=22.4
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeecccccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAFSVR 334 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F~~~ 334 (339)
...++++|++||++.+|||.| |||.-
T Consensus 55 ~~li~~al~eA~~~~~dID~I----A~T~g 80 (342)
T COG0533 55 PPLIEEALAEAGVSLEDIDAI----AVTAG 80 (342)
T ss_pred HHHHHHHHHHcCCCcccCCEE----EEecC
Confidence 368999999999999999999 66644
No 270
>COG3360 Uncharacterized conserved protein [Function unknown]
Probab=31.22 E-value=49 Score=23.19 Aligned_cols=27 Identities=33% Similarity=0.470 Sum_probs=23.5
Q ss_pred chHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 303 APSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 303 ~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
+.-.|++.++.+|--+.+++|++|+-|
T Consensus 18 S~d~Ai~~Ai~RA~~t~~~l~wfeV~~ 44 (71)
T COG3360 18 SIDAAIANAIARAADTLDNLDWFEVVE 44 (71)
T ss_pred cHHHHHHHHHHHHHhhhhcceEEEEEe
Confidence 345799999999999999999999876
No 271
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=30.69 E-value=35 Score=33.19 Aligned_cols=27 Identities=11% Similarity=0.041 Sum_probs=23.5
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
..+++.+|+++||+++|||.+-+..++
T Consensus 32 ~~A~~~Al~dAgl~~~dID~vi~g~~~ 58 (426)
T PRK08170 32 VAAGRALLNRQPFAPDDLDEVILGCAM 58 (426)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecc
Confidence 689999999999999999988776554
No 272
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=30.68 E-value=53 Score=18.77 Aligned_cols=16 Identities=13% Similarity=0.302 Sum_probs=13.3
Q ss_pred HHHHHHcCCCHHHHHH
Q 019555 173 EICANKHTITRDEQDS 188 (339)
Q Consensus 173 ~~~~~~~g~~~~~~~~ 188 (339)
.+|..++|+|.++...
T Consensus 8 NrYV~eh~ls~ee~~~ 23 (28)
T PF12368_consen 8 NRYVKEHGLSEEEVAE 23 (28)
T ss_pred hhhHHhcCCCHHHHHH
Confidence 5799999999998653
No 273
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=30.48 E-value=1.4e+02 Score=28.67 Aligned_cols=77 Identities=16% Similarity=0.029 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeeccc--------CccHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKV--------CSSGMKAVMLAA 110 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~--------cas~~~al~~A~ 110 (339)
.....|+++||+++|++++|||.+-+--... ...-...+.||+.+ .| +..+.| ++++..-+....
T Consensus 288 ~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa-----~~~l~~~e~lG~~~-~p-vN~~GG~la~Ghp~gatG~r~~~~l~ 360 (390)
T PRK06504 288 EAPLPATERALKKAGMKIDDIDLYEVNEAFA-----SVPLAWLKATGADP-ER-LNVNGGAIALGHPLGASGTKLMTTLV 360 (390)
T ss_pred ccHHHHHHHHHHHcCCCHHHCCEEEecccch-----HHHHHHHHHhCCCC-CC-cCCCCcHHhcCCCcchhHHHHHHHHH
Confidence 4456799999999999999999886532211 11122335678753 22 333322 234444455555
Q ss_pred HHHHcCCCceEE
Q 019555 111 QSIQLGINDIVV 122 (339)
Q Consensus 111 ~~I~sG~~~~vL 122 (339)
..++....+..|
T Consensus 361 ~~lr~~~~~~gl 372 (390)
T PRK06504 361 HALKQRGKRYGL 372 (390)
T ss_pred HHHHhhCCCeEE
Confidence 556544444444
No 274
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=30.13 E-value=63 Score=29.95 Aligned_cols=88 Identities=15% Similarity=0.096 Sum_probs=45.8
Q ss_pred HHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc------------ceeeec---ccCc-cHHHH
Q 019555 42 SIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV------------VCTTIN---KVCS-SGMKA 105 (339)
Q Consensus 42 ~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~------------~~~~v~---~~ca-s~~~a 105 (339)
.+.+.+-|+|.|.+|++-|.|+.|-.-. .|..+...+...-|+.... ..-.+. +||+ |+...
T Consensus 206 ~dTI~~h~~D~g~~p~dYDlIvTGDLg~--vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V~ 283 (329)
T PF07451_consen 206 ADTIEQHFKDTGRSPDDYDLIVTGDLGK--VGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVVL 283 (329)
T ss_dssp HHHHHHHHHHCT--GGG-SEEEESS-HH--HHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHHH
T ss_pred HHHHHHHHHHhCCChhhcCeEEecchHH--HHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHHH
Confidence 4556777999999999999999763211 1334444554444543111 001222 2332 22333
Q ss_pred HHHHHHHHHcCCCceEEEEccccccC
Q 019555 106 VMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 106 l~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
-..-...++.|+.+.||+++.-.+-+
T Consensus 284 ~g~ll~~l~~g~~krvL~vaTGALlS 309 (329)
T PF07451_consen 284 CGYLLPKLRKGELKRVLFVATGALLS 309 (329)
T ss_dssp HHCHHHHHHTTS-SEEEEEEEEE---
T ss_pred HHHHHHHHHcCCceEEEEEEchhhcC
Confidence 35557889999999999998776554
No 275
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=28.99 E-value=4e+02 Score=26.18 Aligned_cols=92 Identities=15% Similarity=0.042 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcce--------------eeecccCccH
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC--------------TTINKVCSSG 102 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~--------------~~v~~~cas~ 102 (339)
-.+...+...+.+-.+|..+.+...++.+ ++.+.++.....-+.++|+.. .|. +....=++++
T Consensus 114 D~~~wa~~~aR~~~~~g~~~gd~v~~~~~--yGl~tgg~~~~~ga~rig~~v-ip~~~g~~~~~~~l~~df~~tvI~~tp 190 (438)
T COG1541 114 DIERWAELLARSLYSAGVRKGDKVQNAYG--YGLFTGGLGLHYGAERIGATV-IPISGGNTERQLELMKDFKPTVIAATP 190 (438)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEEEEEee--eccccCCchhHHHHHhhCEEE-EccCCccHHHHHHHHHhcCCcEEEECh
Confidence 35677788888899999999888888877 444445544555666676531 121 1122236788
Q ss_pred HHHHHHHHHHHHcCC--Cc---eEEEEccccccC
Q 019555 103 MKAVMLAAQSIQLGI--ND---IVVAGGMESMSN 131 (339)
Q Consensus 103 ~~al~~A~~~I~sG~--~~---~vLv~g~e~~s~ 131 (339)
...+..|-.+.+.|. .+ ..++.|+|.++.
T Consensus 191 s~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~se 224 (438)
T COG1541 191 SYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSE 224 (438)
T ss_pred HHHHHHHHHHHHcCCChhhcceeEEEEecccCCH
Confidence 999999999999982 12 355788899886
No 276
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=28.68 E-value=1.1e+02 Score=24.17 Aligned_cols=51 Identities=22% Similarity=0.158 Sum_probs=28.8
Q ss_pred HHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee
Q 019555 43 IAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI 95 (339)
Q Consensus 43 ~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v 95 (339)
+-..+.++.-+++++||-.+++. ++++....+++..+-...|+. .+|.+..
T Consensus 24 eLl~~i~~~N~l~~~dIvSi~FT-~T~DL~a~fPA~a~R~~~g~~-~Vpl~c~ 74 (118)
T PF07736_consen 24 ELLEEILERNELSPEDIVSIIFT-VTPDLDAAFPAAAARELPGWD-DVPLMCA 74 (118)
T ss_dssp HHHHHHHHHTT--GGGEEEEEEE-E-TT--SS-TCHHHHHTTTGT-TSEEEEE
T ss_pred HHHHHHHHHcCCCHHHEEEEEEE-eCCCcCccChHHHHHccCCCC-ccceecc
Confidence 33444566679999999999984 666655555554443434886 5777654
No 277
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=28.06 E-value=1.9e+02 Score=27.78 Aligned_cols=97 Identities=14% Similarity=0.056 Sum_probs=51.3
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc-cee
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCT 93 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~-~~~ 93 (339)
+.|+|.+....... ..+. -...++++||+++|++++|||.+-+--... ...-...+.||+-+.+ ..+
T Consensus 265 ~~I~g~~~~~~~~~---~~~~----~~~~a~~~al~~Agl~~~DId~~El~d~F~-----~~~l~~~e~lg~~~~~~~~v 332 (387)
T PRK08947 265 ARIRSMAVAGCDPS---IMGY----GPVPATQKALKRAGLSISDIDVFELNEAFA-----AQSLPCLKDLGLLDKMDEKV 332 (387)
T ss_pred EEEEEEEEcCcCcc---cccc----cHHHHHHHHHHHcCCCHHHCCEEEecccch-----HHHHHHHHHcCCCCCCCCCc
Confidence 67888876521111 0111 236788999999999999999887532211 1111223556762110 111
Q ss_pred eec--------ccCccHHHHHHHHHHHHHcCCCceEEE
Q 019555 94 TIN--------KVCSSGMKAVMLAAQSIQLGINDIVVA 123 (339)
Q Consensus 94 ~v~--------~~cas~~~al~~A~~~I~sG~~~~vLv 123 (339)
.++ -.++||..-+......++.-..++.|+
T Consensus 333 N~~GG~la~GhP~GAtG~~~v~~l~~~L~~~~~~~gl~ 370 (387)
T PRK08947 333 NLNGGAIALGHPLGCSGARISTTLLNLMERKDAQFGLA 370 (387)
T ss_pred CCCCchhhcCCCccccHHHHHHHHHHHHHhcCCCEEEE
Confidence 111 124455666666666665433555554
No 278
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=27.21 E-value=1.9e+02 Score=22.73 Aligned_cols=49 Identities=20% Similarity=0.170 Sum_probs=31.2
Q ss_pred HHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee
Q 019555 45 IECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI 95 (339)
Q Consensus 45 ~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v 95 (339)
..+.+++-++++++|-.+++. ++++.....++..+-+..|+. .+|.+..
T Consensus 26 l~~ii~~N~l~~edivSv~FT-~T~DL~a~FPA~aaR~~~Gw~-~Vplmc~ 74 (117)
T TIGR01796 26 LTELMERNELTPEDLISVIFT-VTEDLHADFPAAAARGLPGWT-DVPVMCA 74 (117)
T ss_pred HHHHHHHcCCCHHHEEEEEEE-ecCcccccChHHHHHhccCCC-Ccceecc
Confidence 334456678999999998884 556654445554443434887 5776543
No 279
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=26.89 E-value=69 Score=30.06 Aligned_cols=50 Identities=24% Similarity=0.145 Sum_probs=33.3
Q ss_pred ceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCC-CCCccCeEEE
Q 019555 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANV-KPLLVQEVFF 64 (339)
Q Consensus 14 ~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl-~~~~Id~i~~ 64 (339)
+-.-+|.++|+-=... ..-..--.+..++++++|++++|| +|.|+-++-+
T Consensus 108 ~~Lavg~a~T~~~~PE-eiGr~aqV~~vA~aV~~aM~~AGI~dpaDVH~VQv 158 (365)
T PF09663_consen 108 KRLAVGVARTRDFLPE-EIGRMAQVEEVAAAVRAAMADAGITDPADVHFVQV 158 (365)
T ss_pred cceEEEEecCCCCChH-HcCcHHHHHHHHHHHHHHHHHcCCCChhheeeEEe
Confidence 4456788887732210 011133467889999999999999 7888776665
No 280
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=26.88 E-value=47 Score=31.86 Aligned_cols=26 Identities=19% Similarity=0.256 Sum_probs=22.9
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeecc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEA 330 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~ 330 (339)
..+++.+|+++||+++|||.+-+...
T Consensus 31 ~~a~~~al~dagi~~~dID~vi~g~~ 56 (388)
T PRK06366 31 GAAIKAVIDDAKLDPALVQEVIMGNV 56 (388)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 68999999999999999999877543
No 281
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=26.75 E-value=89 Score=28.85 Aligned_cols=84 Identities=24% Similarity=0.169 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~ 114 (339)
+....=..+++++|+.++|++|++|+..+.|........ -.+ .......++.. ..+.+ |+.+..|+.-+.
T Consensus 45 e~A~~ni~~ai~~A~~~aG~~~~~i~~~~agla~ag~~~-~~~-~~~~~~~l~~a-~~v~v---~~Dg~iAl~ga~---- 114 (301)
T COG2971 45 EEAVRNIKDAIREALDEAGLKPDEIAAIVAGLALAGANV-EEA-REELERLLPFA-GKVDV---ENDGLIALRGAL---- 114 (301)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHhCceeeeeeccCcch-hHH-HHHHHHhcCcc-ceEEE---ecChHHHHhhcc----
Confidence 344566688999999999999999999998876543321 112 12223344432 24444 455555543321
Q ss_pred cCCCceEEEEcccc
Q 019555 115 LGINDIVVAGGMES 128 (339)
Q Consensus 115 sG~~~~vLv~g~e~ 128 (339)
.+..-++++.|+-+
T Consensus 115 ~~~~Gii~i~GTGS 128 (301)
T COG2971 115 GDDDGIIVIAGTGS 128 (301)
T ss_pred CCCCCEEEEecCCe
Confidence 23445666666543
No 282
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=26.74 E-value=1.8e+02 Score=26.22 Aligned_cols=44 Identities=18% Similarity=0.095 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN 88 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~ 88 (339)
-+..+..+++++- ..|.|++|....+...+..+..++..||++.
T Consensus 99 ~tA~~La~ai~~~-----~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~ 142 (256)
T PRK03359 99 QTASALAAAAQKA-----GFDLILCGDGSSDLYAQQVGLLVGEILNIPA 142 (256)
T ss_pred HHHHHHHHHHHHh-----CCCEEEEcCccccCCCCcHHHHHHHHhCCCc
Confidence 3345555666653 2899999988877777788899999999974
No 283
>PRK05788 cobalamin biosynthesis protein CbiG; Validated
Probab=26.60 E-value=96 Score=28.92 Aligned_cols=61 Identities=25% Similarity=0.243 Sum_probs=39.4
Q ss_pred ceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCC
Q 019555 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP 87 (339)
Q Consensus 14 ~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~ 87 (339)
+..++|+|. |+ +.+. +...++++++|+++|++++.|+.+..-..-. .-..-..++..+|++
T Consensus 193 ~~l~vGIGc----rr-----g~~~-e~i~~ai~~~L~~~~i~~~~i~~iatid~K~---~E~gL~~~a~~lg~p 253 (315)
T PRK05788 193 KNVVLGIGC----RK-----GVSA-EEIAEAVERALEALNIDPRAVKAIASITLKK---DEPGLLQLAEELGVP 253 (315)
T ss_pred CeEEEeecc----CC-----CCCH-HHHHHHHHHHHHHcCCCHHHccEEeeeeccC---CCHHHHHHHHHhCCC
Confidence 446777774 22 2444 4458899999999999999999877543221 112234566777764
No 284
>PLN02854 3-ketoacyl-CoA synthase
Probab=26.48 E-value=2.6e+02 Score=28.07 Aligned_cols=81 Identities=15% Similarity=0.092 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHcCCCC------CccCeEEEEeecCCCCCCcHHHHHHHHcCCC---CCcceeeecccCccHHHHHHHHHH
Q 019555 41 GSIAIECALKRANVKP------LLVQEVFFGNVLSANLGQAPARQAALGAGIP---NSVVCTTINKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~------~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~---~~~~~~~v~~~cas~~~al~~A~~ 111 (339)
+...+++.|.++|+.+ .+||.++.= + .+..+-..+...||++ .+.-.+++..=++++...|..+..
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iH---q--ggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~ 461 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIH---A--GGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELA 461 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEEC---C--CCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHH
Confidence 4567788899999986 477776641 1 2445667888999997 333345556666666666655544
Q ss_pred HH-HcCCC---ceEEEEcc
Q 019555 112 SI-QLGIN---DIVVAGGM 126 (339)
Q Consensus 112 ~I-~sG~~---~~vLv~g~ 126 (339)
.+ +.|+. |.++.+|+
T Consensus 462 ~~~~kGrik~GD~Vl~iaF 480 (521)
T PLN02854 462 YTEAKGRVSAGDRVWQIAF 480 (521)
T ss_pred HHHHcCCCCCCCEEEEEEE
Confidence 43 34432 56665544
No 285
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=26.32 E-value=69 Score=29.02 Aligned_cols=31 Identities=13% Similarity=0.201 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeec
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVL 68 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~ 68 (339)
.||..+++++++++.|+.|.||+-|-+-.+.
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielhdcf 301 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELHDCF 301 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEeeccc
Confidence 5899999999999999999999987654443
No 286
>PLN00415 3-ketoacyl-CoA synthase
Probab=25.78 E-value=37 Score=33.42 Aligned_cols=27 Identities=11% Similarity=0.150 Sum_probs=21.9
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeecccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAFS 332 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F~ 332 (339)
..|++++|+++|++++|||++- ..|..
T Consensus 139 ~~A~~~aL~~aGi~p~dID~LI-vs~T~ 165 (466)
T PLN00415 139 FGALNSLFKKTGIEPREVGIFI-VNCSL 165 (466)
T ss_pred HHHHHHHHHHcCCCHHHCCEEE-EECcC
Confidence 4689999999999999999875 34543
No 287
>PRK13410 molecular chaperone DnaK; Provisional
Probab=25.62 E-value=2.2e+02 Score=29.61 Aligned_cols=48 Identities=15% Similarity=-0.016 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP 87 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~ 87 (339)
.+-..+.++++|+++|+.+++||.|++.. +....|.+-..+...+|..
T Consensus 308 ~~r~~~~i~~~L~~ag~~~~dId~VvLVG--GssRiP~V~~~l~~~fg~~ 355 (668)
T PRK13410 308 LDRLLRPVKRALKDAGLSPEDIDEVVLVG--GSTRMPMVQQLVRTLIPRE 355 (668)
T ss_pred HHHHHHHHHHHHHHcCCChhhCcEEEEEC--CccccHHHHHHHHHHcCCC
Confidence 34456667889999999999999988532 3233455666777777753
No 288
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=25.17 E-value=81 Score=30.72 Aligned_cols=24 Identities=21% Similarity=0.103 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEE
Q 019555 41 GSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
...|+++||+++|++++|||.+-+
T Consensus 311 ~~~a~~~al~~AGl~~~DiD~~Ei 334 (428)
T PRK08963 311 PAYATPLALERAGLTLADLTLIDM 334 (428)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE
Confidence 467899999999999999998765
No 289
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=24.77 E-value=1.8e+02 Score=25.43 Aligned_cols=71 Identities=20% Similarity=0.192 Sum_probs=39.0
Q ss_pred CCHHHHH---HHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHH
Q 019555 35 VSATKLG---SIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAA 110 (339)
Q Consensus 35 ~~~~~L~---~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~ 110 (339)
.++++|. ..+.+.|+. +.-..+|.|.+|+..+... |+..-..|+.++.-..++|.++-. .|+..|.
T Consensus 44 VT~EeL~~M~~~t~~aAl~---Lada~vdvI~Y~CtsgS~i~G~~~d~ei~~~ie~~~~v~vvTts-------~Avv~aL 113 (238)
T COG3473 44 VTPEELLKMESYTERAALE---LADAGVDVIVYGCTSGSLIGGPGYDKEIAQRIEEAKGVPVVTTS-------TAVVEAL 113 (238)
T ss_pred CCHHHHHHHHHHHHHHHHh---cCccccCEEEEeccceeeecCCchhHHHHHHHHhccCCceeech-------HHHHHHH
Confidence 4555543 445555543 3334588899998877654 444456666665432234554432 3455555
Q ss_pred HHHHc
Q 019555 111 QSIQL 115 (339)
Q Consensus 111 ~~I~s 115 (339)
+.+..
T Consensus 114 ~al~a 118 (238)
T COG3473 114 NALGA 118 (238)
T ss_pred HhhCc
Confidence 55543
No 290
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=23.75 E-value=2.9e+02 Score=28.39 Aligned_cols=45 Identities=20% Similarity=0.054 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCC
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP 87 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~ 87 (339)
..+.++++|+++++.+++||.|++.. |...-|.+-..+...+|..
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvG--GssriP~v~~~l~~~fg~~ 355 (616)
T PRK05183 311 TLLACRRALRDAGVEADEVKEVVMVG--GSTRVPLVREAVGEFFGRT 355 (616)
T ss_pred HHHHHHHHHHHcCCCcccCCEEEEEC--CcccChHHHHHHHHHhccC
Confidence 44567889999999999999988632 3333556667777777763
No 291
>PLN03184 chloroplast Hsp70; Provisional
Probab=23.51 E-value=2e+02 Score=29.95 Aligned_cols=46 Identities=17% Similarity=0.057 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCC
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP 87 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~ 87 (339)
-+.+.++++|+++++++++||.|++.- +...-|.+-..+...+|..
T Consensus 347 r~~~~i~~~L~~a~~~~~dId~ViLvG--GssriP~V~~~i~~~fg~~ 392 (673)
T PLN03184 347 RCKTPVENALRDAKLSFKDIDEVILVG--GSTRIPAVQELVKKLTGKD 392 (673)
T ss_pred HHHHHHHHHHHHcCCChhHccEEEEEC--CccccHHHHHHHHHHhCCC
Confidence 345567889999999999999988632 3333556667777777753
No 292
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=23.26 E-value=2.4e+02 Score=29.23 Aligned_cols=46 Identities=9% Similarity=-0.072 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCC
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP 87 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~ 87 (339)
=+.+.++++|+++|+++++||.|++.- +...-|.+-..+...+|..
T Consensus 335 r~~~~v~~~L~~a~~~~~dId~VvLVG--GssriP~V~~~l~~~fg~~ 380 (657)
T PTZ00186 335 RSIAPCKQCMKDAGVELKEINDVVLVG--GMTRMPKVVEEVKKFFQKD 380 (657)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEEEEC--CcccChHHHHHHHHHhCCC
Confidence 345567889999999999999988632 3333556667777777753
No 293
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=22.98 E-value=55 Score=32.23 Aligned_cols=25 Identities=16% Similarity=0.220 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHcCCCCCCCcEEEee
Q 019555 304 PSLAIPKAIANAGLEASQIDYYEIN 328 (339)
Q Consensus 304 ~~~a~~~al~~agl~~~DId~~~~h 328 (339)
...|++++|+++|+++++||++.+-
T Consensus 54 a~~AA~~lL~~a~id~~~Id~Liv~ 78 (454)
T TIGR01833 54 CLTVVSKLMERYNIDYNQIGRLEVG 78 (454)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 3689999999999999999999864
No 294
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=22.83 E-value=70 Score=31.21 Aligned_cols=23 Identities=26% Similarity=0.131 Sum_probs=20.5
Q ss_pred HHHHHHHHHHcCCCCCccCeEEE
Q 019555 42 SIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 42 ~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
..|+++||+.+|++++|||.+-+
T Consensus 314 ~~a~~~al~~Agl~~~Did~~Ei 336 (430)
T TIGR02446 314 SYATPLALQRAGLALSDLTLIDM 336 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEe
Confidence 46899999999999999998765
No 295
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=22.65 E-value=67 Score=30.07 Aligned_cols=43 Identities=21% Similarity=0.404 Sum_probs=30.0
Q ss_pred EEEeeEEeee-CCCcccc-----chHHHHHHHHHHcCC-CCCCCcEEEee
Q 019555 286 KIRGFADAAQ-APEWFTT-----APSLAIPKAIANAGL-EASQIDYYEIN 328 (339)
Q Consensus 286 ~i~g~~~~~~-~~~~~~~-----~~~~a~~~al~~agl-~~~DId~~~~h 328 (339)
.-.|.+++.. .|...+. -.+.++++++..||| +|+|+.|+++-
T Consensus 111 Lavg~a~T~~~~PEeiGr~aqV~~vA~aV~~AM~~AGI~dpaDVH~VQvK 160 (366)
T TIGR02714 111 LTVGVAFTRQFLPEEIGRTAQITETAAAVKRAMRDAGIADPADVHFVQVK 160 (366)
T ss_pred eEEEeecCCCCChHHcCcHHHHHHHHHHHHHHHHHcCCCChhHeeEEEec
Confidence 3455555543 2334442 236899999999999 69999999875
No 296
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=22.55 E-value=59 Score=31.04 Aligned_cols=24 Identities=8% Similarity=0.235 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHcCCCCCCCcEEEe
Q 019555 304 PSLAIPKAIANAGLEASQIDYYEI 327 (339)
Q Consensus 304 ~~~a~~~al~~agl~~~DId~~~~ 327 (339)
...+++.+|+++||+++|||.+-+
T Consensus 30 ~~~a~~~al~dagl~~~~ID~vv~ 53 (382)
T PRK07801 30 GAHVLKGLVDRTGIDPAAVDDVIF 53 (382)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEE
Confidence 368999999999999999998765
No 297
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=22.22 E-value=3.5e+02 Score=27.63 Aligned_cols=45 Identities=16% Similarity=-0.012 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCC
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP 87 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~ 87 (339)
..+.++++|+++++.+.+||.|++.. |....|.+-..+...+|..
T Consensus 295 i~~~i~~~L~~a~~~~~~id~ViLvG--GssriP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 295 TLSICRRALRDAGLSVEEIKGVVLVG--GSTRMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEEC--CcCCChHHHHHHHHHhCCC
Confidence 45667889999999999999988532 3333556667777777753
No 298
>PRK13690 hypothetical protein; Provisional
Probab=21.81 E-value=2.5e+02 Score=23.82 Aligned_cols=72 Identities=17% Similarity=0.216 Sum_probs=40.8
Q ss_pred CCCCceEEEeeccCcc-cccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCC
Q 019555 10 IKARDVCIVGVARTPM-GGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP 87 (339)
Q Consensus 10 ~~~~~v~IvG~~~t~~-~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~ 87 (339)
+...+++++|+..|.+ +++.|...+....+...+++.+.+++.|+. ..+= ++..-+..--.-+.++...|+.
T Consensus 23 l~~g~i~VvGcSTSEV~G~~IGt~ss~eva~~i~~~l~~~~~~~gi~-----LA~Q-cCEHLNRALvvEr~~a~~~~le 95 (184)
T PRK13690 23 LKPGQIFVLGCSTSEVLGERIGTAGSLEVAEAIVEALLEVLKETGIH-----LAVQ-GCEHLNRALVVEREVAEKYGLE 95 (184)
T ss_pred CCCCCEEEEecchHhhCCcccCCcChHHHHHHHHHHHHHHhhhcCcE-----EEEe-chhhhHHHHHHhHHHHHHcCCe
Confidence 4567899999999996 667665444455555555566666566642 2222 2221111111234577777874
No 299
>TIGR01702 CO_DH_cata carbon-monoxide dehydrogenase, catalytic subunit. This model represents the carbon-monoxide dehydrogenase catalytic subunit. This protein is related to prismane (also called hybrid cluster protein), a complex whose activity is not yet fully described; the two share similar sets of ligands to unusual metal-containing clusters.
Probab=21.11 E-value=1.7e+02 Score=29.94 Aligned_cols=56 Identities=16% Similarity=0.111 Sum_probs=31.4
Q ss_pred EEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHHcCCC
Q 019555 63 FFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGIN 118 (339)
Q Consensus 63 ~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~ 118 (339)
.+|.+...+....++..++..||....--.+..+.-.-....|+..+.-++..|-.
T Consensus 509 ~~GsC~D~~r~~~la~aLA~~lgvdi~dLP~~~sApeW~eeKAvai~~~~~~lGi~ 564 (621)
T TIGR01702 509 HFGSCVDNGRAVDLATALAEDLGVDIPQLPLVASAPEWMEEKALADGTFAVSLGLP 564 (621)
T ss_pred cccccccHHHHHHHHHHHHHHhCcCcccCCccccchhHHHHHHHHHHHHHHHcCCc
Confidence 35555443333346667777777642111222222234556688888888888864
No 300
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=20.97 E-value=93 Score=29.42 Aligned_cols=22 Identities=27% Similarity=0.413 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCCCCCCCcEEE
Q 019555 305 SLAIPKAIANAGLEASQIDYYE 326 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~ 326 (339)
.+.++++|+.||++++|+|.+-
T Consensus 87 ~~~iqral~aa~~~p~dldaIA 108 (405)
T KOG2707|consen 87 PRLIQRALDAAGLSPKDLDAIA 108 (405)
T ss_pred HHHHHHHHHHcCCCcccceeEE
Confidence 3799999999999999999984
No 301
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=20.58 E-value=96 Score=29.58 Aligned_cols=26 Identities=27% Similarity=0.327 Sum_probs=23.4
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeecc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEA 330 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~ 330 (339)
+.+++++++++|++++|||+|-.|-.
T Consensus 74 a~av~~~~~~~~l~~~~id~IgsHGQ 99 (365)
T PRK09585 74 AEAVNALLAEAGLSPEDIDAIGSHGQ 99 (365)
T ss_pred HHHHHHHHHHcCCCccCccEEEeCCc
Confidence 58999999999999999999988753
No 302
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion]
Probab=20.41 E-value=2.8e+02 Score=25.14 Aligned_cols=44 Identities=18% Similarity=0.081 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN 88 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~ 88 (339)
-+..++.+++++.+ .|.|++|....++..+..+..++.+||++.
T Consensus 98 ~ta~~Laa~~~~~~-----~~LVl~G~qa~D~~t~qvg~~lAe~Lg~P~ 141 (260)
T COG2086 98 ATAKALAAAVKKIG-----PDLVLTGKQAIDGDTGQVGPLLAELLGWPQ 141 (260)
T ss_pred HHHHHHHHHHHhcC-----CCEEEEecccccCCccchHHHHHHHhCCce
Confidence 34455556666555 448899988887777788899999999974
No 303
>cd01915 CODH Carbon monoxide dehydrogenase (CODH) is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA, respectively. CODH has two types of metal clusters, a cubane [Fe4-S4] center (B-cluster) similar to that of hybrid cluster protein (HCP) and a Ni-Fe-S center (C-cluster) where carbon monoxide oxidation occurs. Bifunctional CODH forms a heterotetramer with acetyl-CoA synthase (ACS) consisting of two CODH and two ACS subunits while monofunctional CODH forms a homodimer. Bifunctional CODH reduces carbon dioxide to carbon monoxide and ACS then synthesizes acetyl-CoA from carbon monoxide, CoA, and a methyl group donated by another protein (CoFeSP), while monofunctional CODH oxidizes carbon monoxide to carbon dioxide. CODH and ACS each have a metal cluster referred to as the C- and A-clusters, respectively.
Probab=20.27 E-value=1.5e+02 Score=30.33 Aligned_cols=55 Identities=16% Similarity=0.086 Sum_probs=32.0
Q ss_pred EEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHHcCCC
Q 019555 64 FGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGIN 118 (339)
Q Consensus 64 ~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~ 118 (339)
+|++...+....++..++..||...+.-.+....-.--...|+..+.-++..|-.
T Consensus 502 ~GsCvDn~r~~~~a~aLA~~lgvdi~~LPl~~~Apew~eeKAvaig~~~valGI~ 556 (613)
T cd01915 502 MGSCVDNSRIVDLATALANELGVDIPDLPLVASAPEWMEEKAVAIGTWAVALGLP 556 (613)
T ss_pred cccchhHHHHHHHHHHHHHHhCCCcccCCceeechhhHhHHHHHHHHHHHHcCCc
Confidence 4444433323346667777777642222333333344567788888888888865
No 304
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=20.12 E-value=3.4e+02 Score=21.35 Aligned_cols=49 Identities=27% Similarity=0.239 Sum_probs=29.4
Q ss_pred HHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee
Q 019555 45 IECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI 95 (339)
Q Consensus 45 ~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v 95 (339)
..+.+++-++++++|-.+++. ++++.....++..+-+.-|.. .+|.+..
T Consensus 26 l~~i~~~N~l~~edivSv~FT-~T~DL~a~FPA~aaR~~~~~~-~Vplmc~ 74 (117)
T cd02185 26 LEEIIERNNIKPEDIISVIFT-VTPDLDAAFPAKAARELGGWK-YVPLMCA 74 (117)
T ss_pred HHHHHHHcCCCHHHEEEEEEE-eCCcccccChHHHHHhcCCCC-Ccceeec
Confidence 334456678999999999884 556654445453333333554 4666543
Done!