Query 019555
Match_columns 339
No_of_seqs 129 out of 1206
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 03:35:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019555.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019555hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dd5_A Acetyl-COA acetyltransf 100.0 2.3E-57 7.8E-62 433.9 31.1 324 12-337 6-330 (396)
2 3ss6_A Acetyl-COA acetyltransf 100.0 8E-57 2.7E-61 429.9 31.0 324 11-337 3-327 (394)
3 1ulq_A Putative acetyl-COA ace 100.0 1.2E-56 4.3E-61 429.6 29.8 325 12-338 1-332 (401)
4 4e1l_A Acetoacetyl-COA thiolas 100.0 1.7E-56 5.8E-61 427.9 29.3 326 11-337 3-329 (395)
5 2vu1_A Acetyl-COA acetyltransf 100.0 1.9E-55 6.5E-60 420.3 31.0 323 12-337 2-325 (392)
6 1wl4_A Acetyl-coenzyme A acety 100.0 6E-55 2E-59 417.4 31.9 323 12-337 5-330 (397)
7 3goa_A 3-ketoacyl-COA thiolase 100.0 1.9E-54 6.4E-59 412.4 31.7 313 12-338 1-318 (387)
8 1afw_A 3-ketoacetyl-COA thiola 100.0 1.3E-54 4.4E-59 414.1 28.2 319 7-338 4-329 (393)
9 2wu9_A 3-ketoacyl-COA thiolase 100.0 2.3E-54 8E-59 417.0 27.4 317 11-338 28-351 (442)
10 2ib8_A Acetyl-COA acetyltransf 100.0 3.7E-53 1.3E-57 404.9 29.2 325 11-338 6-331 (395)
11 1wdk_C 3-ketoacyl-COA thiolase 100.0 1.3E-52 4.4E-57 400.3 30.8 314 10-337 2-320 (390)
12 2iik_A 3-ketoacyl-COA thiolase 100.0 2E-51 6.8E-56 394.9 28.5 316 12-338 29-349 (418)
13 3svk_A Acetyl-COA acetyltransf 100.0 2.9E-51 9.9E-56 392.3 27.9 312 11-338 5-341 (407)
14 4egv_A Acetyl-COA acetyltransf 100.0 4.3E-41 1.5E-45 330.3 19.0 299 12-338 17-353 (520)
15 1e5m_A KAS II, beta ketoacyl a 99.9 2.2E-26 7.6E-31 220.9 20.1 199 39-333 79-312 (416)
16 3o04_A LMO2201 protein, beta-k 99.9 2.6E-25 8.9E-30 213.3 21.9 199 38-333 75-308 (413)
17 1ox0_A Beta ketoacyl-acyl carr 99.9 5.9E-25 2E-29 211.8 20.2 200 38-334 94-328 (430)
18 4ewg_A Beta-ketoacyl synthase; 99.9 6.5E-25 2.2E-29 210.5 19.1 199 38-333 78-310 (412)
19 3kzu_A 3-oxoacyl-(acyl-carrier 99.9 3.8E-25 1.3E-29 213.0 15.3 202 37-333 87-324 (428)
20 2gqd_A 3-oxoacyl-[acyl-carrier 99.9 3.8E-24 1.3E-28 206.5 19.5 200 38-334 99-333 (437)
21 1j3n_A 3-oxoacyl-(acyl-carrier 99.9 6.5E-25 2.2E-29 210.3 13.8 202 37-334 71-307 (408)
22 2iwz_A 3-oxoacyl-[acyl-carrier 99.9 3.9E-24 1.3E-28 206.5 19.3 199 38-333 98-332 (438)
23 1tqy_B Actinorhodin polyketide 99.9 5.4E-24 1.9E-28 204.3 18.7 198 38-333 80-310 (415)
24 4ddo_A 3-oxoacyl-[acyl-carrier 99.9 1.8E-24 6.1E-29 209.6 14.1 202 37-333 102-339 (451)
25 3mqd_A Beta-ketoacyl synthase; 99.9 5.2E-24 1.8E-28 205.1 16.9 198 37-333 92-322 (428)
26 3ho9_A 3-oxoacyl-[acyl-carrier 99.9 4.4E-24 1.5E-28 205.6 15.7 200 38-333 89-323 (427)
27 1tqy_A Beta-ketoacyl synthase/ 99.9 1.6E-23 5.3E-28 201.6 18.8 200 38-333 74-314 (424)
28 2wge_A 3-oxoacyl-[acyl-carrier 99.9 6.3E-24 2.2E-28 203.7 16.0 198 38-333 84-316 (416)
29 2ix4_A 3-oxoacyl-[acyl-carrier 99.9 2.1E-23 7.1E-28 201.0 17.3 202 37-333 88-325 (431)
30 2vba_A 3-oxoacyl-[acyl-carrier 99.9 5.1E-23 1.7E-27 196.9 15.6 198 37-333 71-303 (406)
31 2hg4_A DEBS, 6-deoxyerythronol 99.9 1.5E-22 5E-27 210.8 20.1 195 38-333 117-339 (917)
32 2gp6_A 3-oxoacyl-[acyl-carrier 99.9 2.3E-22 8E-27 193.7 20.0 198 38-333 100-332 (434)
33 2qo3_A Eryaii erythromycin pol 99.9 3.1E-22 1.1E-26 208.2 20.3 196 38-334 96-318 (915)
34 3hhd_A Fatty acid synthase; tr 99.9 8.7E-22 3E-26 205.7 17.0 191 38-333 81-300 (965)
35 1zow_A 3-oxoacyl-[acyl-carrier 99.9 7.9E-22 2.7E-26 182.2 14.7 109 22-131 36-144 (313)
36 1u6e_A 3-oxoacyl-[acyl-carrier 99.9 1.2E-21 4.2E-26 182.5 12.4 99 32-131 56-154 (335)
37 4dfe_A 3-oxoacyl-[acyl-carrier 99.9 4.1E-21 1.4E-25 179.0 15.4 109 23-131 51-159 (333)
38 2ebd_A 3-oxoacyl-[acyl-carrier 99.9 8.3E-21 2.8E-25 174.9 15.3 96 35-131 48-143 (309)
39 3il3_A 3-oxoacyl-[acyl-carrier 99.8 1E-19 3.4E-24 168.8 18.8 109 22-131 43-151 (323)
40 1ub7_A 3-oxoacyl-[acyl-carrier 99.8 2.2E-20 7.4E-25 173.2 13.1 97 33-131 46-142 (322)
41 1hnj_A Beta-ketoacyl-acyl carr 99.8 3.4E-20 1.1E-24 171.6 13.6 98 33-131 47-144 (317)
42 3s21_A 3-oxoacyl-[ACP] synthas 99.8 4.3E-20 1.5E-24 172.9 13.6 99 33-131 64-162 (345)
43 1mzj_A Beta-ketoacylsynthase I 99.8 7.8E-20 2.7E-24 170.7 13.1 98 33-131 56-153 (339)
44 4efi_A 3-oxoacyl-(acyl-carrier 99.8 1.8E-19 6.3E-24 169.1 15.5 100 32-131 61-160 (354)
45 3gwa_A 3-oxoacyl-(acyl-carrier 99.8 2.8E-19 9.7E-24 168.5 16.2 99 33-131 76-174 (365)
46 2h84_A Steely1; thiolase-fold, 99.8 1.1E-19 3.6E-24 172.1 11.9 96 35-131 93-189 (374)
47 3h78_A PQS biosynthetic enzyme 99.8 4.7E-19 1.6E-23 166.5 15.8 98 33-131 70-167 (359)
48 1ted_A PKS18; thiolase fold, s 99.8 3.9E-20 1.3E-24 176.2 8.3 96 35-131 111-207 (393)
49 1u0m_A Putative polyketide syn 99.8 2.7E-19 9.3E-24 169.7 13.2 96 35-131 82-178 (382)
50 3zen_D Fatty acid synthase; tr 99.8 2.6E-19 9E-24 201.9 14.7 205 37-333 2647-2897(3089)
51 4ewp_A 3-oxoacyl-[acyl-carrier 99.8 7.2E-19 2.5E-23 164.9 14.9 99 32-131 57-155 (350)
52 2pff_A Fatty acid synthase sub 99.8 7.5E-20 2.6E-24 192.2 9.0 167 38-295 1013-1213(1688)
53 2uv8_A Fatty acid synthase sub 99.8 4.5E-19 1.6E-23 191.7 14.9 165 38-296 1212-1413(1887)
54 3led_A 3-oxoacyl-acyl carrier 99.8 1.4E-18 4.9E-23 165.0 16.7 94 36-131 116-209 (392)
55 2uv9_A Fatty acid synthase alp 99.8 1.2E-18 4.2E-23 188.0 15.2 168 38-296 1187-1388(1878)
56 3lma_A Stage V sporulation pro 99.8 4.3E-19 1.5E-23 162.9 9.7 92 35-133 53-144 (347)
57 2x3e_A 3-oxoacyl-[acyl-carrier 99.8 9.8E-19 3.3E-23 162.7 11.8 94 35-131 51-144 (331)
58 3tsy_A Fusion protein 4-coumar 99.8 2.2E-18 7.4E-23 181.9 14.3 94 37-131 689-783 (979)
59 3s3l_A CERJ; acyltransferase, 99.8 1E-17 3.5E-22 157.3 16.5 95 36-131 53-150 (357)
60 1xpm_A 3-hydroxy-3-methylgluta 99.7 4.8E-18 1.6E-22 161.8 11.4 94 33-128 47-140 (396)
61 2d3m_A Pentaketide chromone sy 99.7 1.9E-17 6.6E-22 158.2 15.2 96 35-131 113-209 (406)
62 3v4n_A HMG-COA synthase; hydro 99.7 7.3E-18 2.5E-22 159.8 11.3 97 33-131 52-148 (388)
63 3ov2_A Curcumin synthase; type 99.7 3.1E-17 1.1E-21 155.9 14.8 95 36-131 101-196 (393)
64 3euo_A Type III pentaketide sy 99.7 2E-17 6.8E-22 156.6 13.4 95 36-131 80-179 (379)
65 3sqz_A Putative hydroxymethylg 99.7 9.8E-18 3.3E-22 160.3 11.0 97 33-131 81-177 (425)
66 3oit_A OS07G0271500 protein; t 99.7 2.2E-17 7.7E-22 156.6 12.9 95 36-131 95-190 (387)
67 2vz8_A Fatty acid synthase; tr 99.7 3E-17 1E-21 185.5 15.8 189 38-331 79-296 (2512)
68 2v4w_A Hydroxymethylglutaryl-C 99.7 3.6E-17 1.2E-21 157.0 13.6 112 16-130 36-151 (460)
69 3v7i_A Putative polyketide syn 99.7 2.8E-17 9.7E-22 156.6 12.1 109 21-131 122-231 (413)
70 3e1h_A PKSIIINC, putative unch 99.7 6.2E-17 2.1E-21 156.3 14.0 93 38-131 111-208 (465)
71 1i88_A CHS2, chalcone synthase 99.7 1.4E-16 4.7E-21 151.4 15.3 96 35-131 100-196 (389)
72 2f82_A HMG-COA synthase; HMGS1 99.7 1.7E-16 5.8E-21 153.4 15.8 98 33-130 48-149 (450)
73 3a5r_A Benzalacetone synthase; 99.7 1.4E-16 4.7E-21 151.4 14.4 96 35-131 96-192 (387)
74 3awk_A Chalcone synthase-like 99.7 1.3E-16 4.4E-21 152.2 13.8 96 35-131 113-209 (402)
75 2p0u_A Stilbenecarboxylate syn 99.7 2.6E-16 8.8E-21 150.6 14.6 96 35-131 118-214 (413)
76 1ee0_A 2-pyrone synthase; poly 99.7 2.1E-16 7.1E-21 150.8 13.9 96 35-131 105-201 (402)
77 3il6_A 3-oxoacyl-[acyl-carrier 99.7 2.5E-16 8.5E-21 145.9 12.3 94 37-131 52-145 (321)
78 1xes_A Dihydropinosylvin synth 99.7 6.5E-16 2.2E-20 147.8 15.2 95 36-131 124-219 (413)
79 2p8u_A Hydroxymethylglutaryl-C 99.6 5.6E-15 1.9E-19 143.5 14.5 111 14-128 53-168 (478)
80 2wya_A Hydroxymethylglutaryl-C 99.5 3.8E-14 1.3E-18 137.4 9.6 92 33-124 50-143 (460)
81 3lma_A Stage V sporulation pro 94.1 0.098 3.3E-06 47.9 7.0 91 39-131 207-312 (347)
82 3gwa_A 3-oxoacyl-(acyl-carrier 92.0 0.41 1.4E-05 44.2 7.9 83 39-126 266-352 (365)
83 4dfe_A 3-oxoacyl-[acyl-carrier 91.1 0.48 1.6E-05 43.0 7.3 80 39-126 234-320 (333)
84 2x3e_A 3-oxoacyl-[acyl-carrier 90.9 0.51 1.8E-05 42.7 7.3 81 39-127 224-311 (331)
85 3s21_A 3-oxoacyl-[ACP] synthas 90.9 0.49 1.7E-05 43.2 7.1 82 39-127 246-333 (345)
86 3il3_A 3-oxoacyl-[acyl-carrier 90.6 0.55 1.9E-05 42.5 7.2 80 39-126 224-310 (323)
87 3h78_A PQS biosynthetic enzyme 90.3 0.42 1.4E-05 44.0 6.1 81 39-126 254-338 (359)
88 1hnj_A Beta-ketoacyl-acyl carr 90.2 0.65 2.2E-05 41.6 7.3 80 40-127 219-305 (317)
89 1zow_A 3-oxoacyl-[acyl-carrier 89.4 0.84 2.9E-05 40.8 7.3 80 40-127 213-299 (313)
90 1ted_A PKS18; thiolase fold, s 89.3 0.83 2.8E-05 42.5 7.4 84 39-127 287-378 (393)
91 1u6e_A 3-oxoacyl-[acyl-carrier 88.9 1 3.4E-05 40.7 7.6 46 39-89 232-277 (335)
92 1mzj_A Beta-ketoacylsynthase I 88.4 1.1 3.7E-05 40.6 7.4 81 39-127 231-319 (339)
93 2ebd_A 3-oxoacyl-[acyl-carrier 87.3 1.4 4.8E-05 39.1 7.4 79 40-126 211-296 (309)
94 4efi_A 3-oxoacyl-(acyl-carrier 86.1 1.4 4.7E-05 40.4 6.7 82 39-127 244-331 (354)
95 1ub7_A 3-oxoacyl-[acyl-carrier 85.4 2.2 7.4E-05 38.2 7.6 80 39-126 220-306 (322)
96 2ib8_A Acetyl-COA acetyltransf 85.2 1.6 5.4E-05 40.6 6.7 72 41-121 297-378 (395)
97 3s3l_A CERJ; acyltransferase, 85.0 0.87 3E-05 41.8 4.7 82 39-127 238-326 (357)
98 2gel_A Putative GRAM negative 84.9 2.3 7.9E-05 36.4 7.2 68 37-109 34-101 (231)
99 4ewp_A 3-oxoacyl-[acyl-carrier 83.5 2.7 9.2E-05 38.2 7.4 80 40-126 250-336 (350)
100 1u0m_A Putative polyketide syn 81.4 1.7 5.9E-05 40.1 5.3 41 44-89 257-297 (382)
101 3r6m_A YEAZ, resuscitation pro 81.3 0.86 2.9E-05 38.7 2.9 67 38-109 36-102 (213)
102 3kzu_A 3-oxoacyl-(acyl-carrier 81.1 3.4 0.00012 38.8 7.2 98 15-117 271-376 (428)
103 3tsy_A Fusion protein 4-coumar 80.7 3.3 0.00011 43.1 7.7 73 40-117 865-944 (979)
104 2a6a_A Hypothetical protein TM 80.2 0.92 3.1E-05 38.7 2.7 60 36-95 44-103 (218)
105 4e1l_A Acetoacetyl-COA thiolas 79.3 4.7 0.00016 37.3 7.5 76 41-123 296-379 (395)
106 3ss6_A Acetyl-COA acetyltransf 76.8 3.9 0.00013 37.9 6.1 76 41-123 294-377 (394)
107 3led_A 3-oxoacyl-acyl carrier 75.3 5.6 0.00019 36.9 6.8 82 39-127 291-379 (392)
108 2vu1_A Acetyl-COA acetyltransf 74.2 8 0.00027 35.7 7.6 74 41-123 292-375 (392)
109 1ulq_A Putative acetyl-COA ace 72.3 11 0.00038 34.8 8.1 95 15-124 279-384 (401)
110 3ho9_A 3-oxoacyl-[acyl-carrier 71.7 3.3 0.00011 38.8 4.3 100 15-117 270-376 (427)
111 4ewg_A Beta-ketoacyl synthase; 71.6 3.4 0.00011 38.6 4.3 96 15-117 259-360 (412)
112 1j3n_A 3-oxoacyl-(acyl-carrier 71.5 2.4 8.3E-05 39.4 3.3 100 15-117 253-359 (408)
113 4dd5_A Acetyl-COA acetyltransf 70.0 6.4 0.00022 36.4 5.9 76 41-123 297-380 (396)
114 1wl4_A Acetyl-coenzyme A acety 69.8 6.7 0.00023 36.3 5.9 74 41-123 297-380 (397)
115 3svk_A Acetyl-COA acetyltransf 69.1 8.3 0.00028 35.9 6.4 73 42-123 308-390 (407)
116 2d3m_A Pentaketide chromone sy 69.0 11 0.00037 34.9 7.2 82 40-127 291-390 (406)
117 2w6k_A COBE; biosynthetic prot 68.9 10 0.00035 29.9 5.9 59 16-87 12-70 (145)
118 3eno_A Putative O-sialoglycopr 68.8 6.9 0.00023 35.4 5.6 29 39-67 54-82 (334)
119 1tqy_B Actinorhodin polyketide 67.0 6.9 0.00024 36.4 5.4 96 15-117 260-361 (415)
120 2h84_A Steely1; thiolase-fold, 66.2 12 0.00041 34.1 6.8 45 39-89 267-317 (374)
121 2qo3_A Eryaii erythromycin pol 66.1 19 0.00066 37.3 9.0 100 15-117 264-373 (915)
122 2wu9_A 3-ketoacyl-COA thiolase 64.4 15 0.00051 34.6 7.2 74 41-123 317-402 (442)
123 4egv_A Acetyl-COA acetyltransf 63.2 20 0.00068 34.5 8.0 82 39-125 317-407 (520)
124 1tqy_A Beta-ketoacyl synthase/ 62.2 5.2 0.00018 37.4 3.5 100 15-117 261-367 (424)
125 2v4w_A Hydroxymethylglutaryl-C 62.2 2.9 9.9E-05 39.8 1.8 62 269-330 19-84 (460)
126 4ddo_A 3-oxoacyl-[acyl-carrier 60.1 9.1 0.00031 36.1 4.9 78 39-117 308-391 (451)
127 1wdk_C 3-ketoacyl-COA thiolase 58.5 19 0.00065 33.1 6.7 97 15-123 268-373 (390)
128 3goa_A 3-ketoacyl-COA thiolase 58.5 14 0.00048 34.0 5.8 77 42-123 285-370 (387)
129 2hg4_A DEBS, 6-deoxyerythronol 58.2 18 0.00061 37.5 7.0 99 15-117 286-395 (917)
130 3hhd_A Fatty acid synthase; tr 57.2 27 0.00092 36.4 8.1 101 15-117 246-354 (965)
131 3o04_A LMO2201 protein, beta-k 54.5 14 0.00049 34.2 5.1 100 15-117 255-361 (413)
132 3ov2_A Curcumin synthase; type 54.4 13 0.00045 34.3 4.9 80 42-127 280-374 (393)
133 1xpm_A 3-hydroxy-3-methylgluta 53.2 6.9 0.00024 36.2 2.7 25 40-64 208-232 (396)
134 2gqd_A 3-oxoacyl-[acyl-carrier 51.5 15 0.00052 34.4 4.8 100 15-117 279-385 (437)
135 2ivn_A O-sialoglycoprotein end 50.9 9.6 0.00033 34.3 3.2 29 39-67 49-77 (330)
136 2iwz_A 3-oxoacyl-[acyl-carrier 50.6 14 0.00046 34.7 4.3 100 15-117 279-385 (438)
137 2wya_A Hydroxymethylglutaryl-C 49.1 9.5 0.00032 36.1 3.0 25 304-328 58-82 (460)
138 3e1h_A PKSIIINC, putative unch 48.9 17 0.00058 34.5 4.7 46 39-90 293-345 (465)
139 1e5m_A KAS II, beta ketoacyl a 48.7 17 0.00058 33.7 4.6 100 15-117 259-365 (416)
140 3awk_A Chalcone synthase-like 48.5 36 0.0012 31.4 6.8 81 41-127 292-387 (402)
141 1ee0_A 2-pyrone synthase; poly 47.4 39 0.0013 31.0 6.9 82 40-127 283-379 (402)
142 1xes_A Dihydropinosylvin synth 47.1 41 0.0014 31.1 7.0 83 39-127 300-397 (413)
143 3a5r_A Benzalacetone synthase; 45.9 33 0.0011 31.3 6.1 83 39-127 273-370 (387)
144 2p8u_A Hydroxymethylglutaryl-C 45.5 13 0.00046 35.3 3.4 29 304-332 77-105 (478)
145 3oit_A OS07G0271500 protein; t 45.3 14 0.00047 34.1 3.4 82 40-126 271-368 (387)
146 1ox0_A Beta ketoacyl-acyl carr 45.0 17 0.0006 33.8 4.1 76 39-117 296-377 (430)
147 2gp6_A 3-oxoacyl-[acyl-carrier 45.0 19 0.00065 33.7 4.3 98 15-117 280-384 (434)
148 2p0u_A Stilbenecarboxylate syn 44.3 47 0.0016 30.7 6.9 83 39-127 295-392 (413)
149 3ven_A O-carbamoyltransferase 44.1 11 0.00038 36.8 2.6 28 303-330 51-78 (576)
150 2wge_A 3-oxoacyl-[acyl-carrier 43.8 20 0.00069 33.3 4.3 26 39-64 285-310 (416)
151 3il6_A 3-oxoacyl-[acyl-carrier 43.8 14 0.00048 33.0 3.1 27 305-331 57-83 (321)
152 2ix4_A 3-oxoacyl-[acyl-carrier 43.5 23 0.00079 33.0 4.7 77 39-116 294-379 (431)
153 1i88_A CHS2, chalcone synthase 43.3 42 0.0014 30.6 6.4 83 39-127 277-374 (389)
154 3euo_A Type III pentaketide sy 42.0 15 0.0005 33.8 3.0 27 305-331 86-112 (379)
155 1afw_A 3-ketoacetyl-COA thiola 39.6 15 0.00051 33.9 2.6 88 15-117 276-372 (393)
156 2g0c_A ATP-dependent RNA helic 38.7 11 0.00038 25.7 1.3 33 304-336 15-47 (76)
157 1xho_A Chorismate mutase; sout 36.0 1.3E+02 0.0043 23.6 6.9 50 44-96 56-105 (148)
158 3v7i_A Putative polyketide syn 33.2 65 0.0022 29.9 5.9 43 40-90 308-358 (413)
159 3ho6_A Toxin A; inositol phosp 32.9 1.1E+02 0.0037 26.5 6.7 56 14-72 107-164 (267)
160 2iik_A 3-ketoacyl-COA thiolase 32.5 19 0.00065 33.5 2.1 24 41-64 315-338 (418)
161 3eeq_A Putative cobalamin bios 28.3 59 0.002 29.3 4.6 41 14-64 208-248 (336)
162 1dbf_A Protein (chorismate mut 27.0 1.8E+02 0.006 22.2 6.2 51 43-96 26-77 (127)
163 3ven_A O-carbamoyltransferase 26.3 38 0.0013 33.0 3.1 27 40-66 51-77 (576)
164 3by5_A Cobalamin biosynthesis 26.2 89 0.003 24.7 4.7 59 13-87 8-66 (155)
165 1ufy_A Chorismate mutase; shik 26.2 2E+02 0.0068 21.7 6.4 50 44-96 26-76 (122)
166 2vz8_A Fatty acid synthase; tr 25.9 91 0.0031 36.2 6.5 101 15-118 244-353 (2512)
167 3zyy_X Iron-sulfur cluster bin 25.2 98 0.0033 30.5 5.8 66 35-104 507-576 (631)
168 2f82_A HMG-COA synthase; HMGS1 23.7 41 0.0014 31.5 2.8 28 304-331 56-83 (450)
169 3pa8_A Toxin B; CLAN CD cystei 23.6 98 0.0034 26.4 4.7 55 14-71 104-160 (254)
170 3onr_A Protein transport prote 23.3 35 0.0012 23.3 1.6 27 303-329 17-43 (72)
171 3eno_A Putative O-sialoglycopr 22.4 39 0.0014 30.3 2.2 25 304-328 56-80 (334)
172 2d0o_A DIOL dehydratase-reacti 21.8 39 0.0013 32.8 2.1 33 302-334 48-80 (610)
173 2gel_A Putative GRAM negative 21.7 43 0.0015 28.3 2.2 25 303-327 37-61 (231)
174 2ivn_A O-sialoglycoprotein end 21.5 52 0.0018 29.4 2.8 22 306-327 53-74 (330)
175 3r6m_A YEAZ, resuscitation pro 21.2 55 0.0019 27.4 2.7 24 304-327 39-62 (213)
176 2ux9_A Dodecin; flavoprotein; 20.9 34 0.0012 23.2 1.1 27 303-329 17-43 (69)
177 2cc6_A VNG1446H, dodecin; flav 20.8 33 0.0011 23.2 1.0 27 303-329 15-41 (68)
178 2yiz_A Dodecin; flavoprotein, 20.3 35 0.0012 23.1 1.1 27 303-329 17-43 (69)
No 1
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=100.00 E-value=2.3e-57 Score=433.88 Aligned_cols=324 Identities=45% Similarity=0.665 Sum_probs=295.2
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~ 91 (339)
|++|+|||+++|||+++.+.+++.++.+|+.+|+++||+++|+++++||.+++++.++...++.++++++..+|+++.+|
T Consensus 6 m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p 85 (396)
T 4dd5_A 6 MREVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKP 85 (396)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC
T ss_pred CCcEEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCce
Confidence 57999999999999999888889999999999999999999999999999999998887778899999999999976789
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHH
Q 019555 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (339)
Q Consensus 92 ~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (339)
.++++.+|+|++.+|..|+.+|++|++++|||+|+|.+++.|+.....+++..++.....+++..+++.+|+....|++.
T Consensus 86 ~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (396)
T 4dd5_A 86 AMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGIT 165 (396)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHH
T ss_pred EEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHH
Confidence 99999999999999999999999999999999999999998877655566666665554555555677888888899999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCCC
Q 019555 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250 (339)
Q Consensus 172 a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~ 250 (339)
+++|+++||+++|+++.|++++|+++..||++++|+++|.|++++.+++. ..+++|+.+|+ +|.|+|++++|+|+|+
T Consensus 166 a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~--~~~~~d~~~r~~~t~e~l~~~~~v~~p~ 243 (396)
T 4dd5_A 166 AENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGD--TVVDKDEYIKPGTTMEKLAKLRPAFKKD 243 (396)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----C--EEECSCSCCCTTCCHHHHHHCCBSSSTT
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCc--eeecCcccccCCCCHHHHhhCCCccCCC
Confidence 99999999999999999999999999999999999999999999877663 57899999998 9999999999999999
Q ss_pred CccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeecc
Q 019555 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (339)
Q Consensus 251 g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd~ 330 (339)
|++|++||++++|||+++||++++.|++++.+++++|.|++...+.|..++.++..+++++|+++|++++|||++|+||+
T Consensus 244 g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~ 323 (396)
T 4dd5_A 244 GTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDLVEANEA 323 (396)
T ss_dssp CSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCS
T ss_pred CCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHcCEEEecCh
Confidence 99999999999999999999999999999999999999999988777777778899999999999999999999999999
Q ss_pred ccccccc
Q 019555 331 FSVRNHV 337 (339)
Q Consensus 331 F~~~~l~ 337 (339)
|++..+.
T Consensus 324 f~~~~~~ 330 (396)
T 4dd5_A 324 FAAQSVA 330 (396)
T ss_dssp BHHHHHH
T ss_pred HHHHHHH
Confidence 9987654
No 2
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=8e-57 Score=429.94 Aligned_cols=324 Identities=40% Similarity=0.581 Sum_probs=295.2
Q ss_pred CCCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc
Q 019555 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (339)
Q Consensus 11 ~~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~ 90 (339)
+|++|+|||+++|||+|+.+.++++++.+|+.+|+++||+|+|+++++||.+++|+..+...++++++.++..+|++..+
T Consensus 3 ~m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~ 82 (394)
T 3ss6_A 3 AMHNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTV 82 (394)
T ss_dssp CCCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTC
T ss_pred CCceEEEEEcccCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCc
Confidence 46899999999999999988888999999999999999999999999999999999887766788999999999997678
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHH
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (339)
|.++++.+|+|++.+|..|+++|++|++++|||+|+|.+++.|......+++..++.....++.. +++.+|+....|++
T Consensus 83 p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~ 161 (394)
T 3ss6_A 83 TGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVW-EVLEDPIHHIMMGE 161 (394)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHH-HHTBCTTTCCBHHH
T ss_pred eEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccc-cccccccccchHHH
Confidence 99999999999999999999999999999999999999999877655455555555443333333 56778888889999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCC
Q 019555 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (339)
Q Consensus 171 ~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~ 249 (339)
.+++|+++||+++|+++.|++++|+++..||.+++|++||.|++++.++++ .++++|+.+|+ +|.|++++++|+|++
T Consensus 162 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~--~~~~~d~~~R~~~t~e~~~~~~pvf~~ 239 (394)
T 3ss6_A 162 TAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKE--VVFSKDEHPRADITAEKLAGLKPAFRK 239 (394)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCE--EEECSCCCCCTTCCHHHHHTCCBSSST
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCc--eeecccccccCCCCHHHHhhCCCccCC
Confidence 999999999999999999999999999999999999999999999887664 67899999998 999999999999999
Q ss_pred CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 250 ~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
+|++|++||++++|||+++||++++.|++++.+++++|.|++....+|..++.++..+++++|+++|++++|||++|+||
T Consensus 240 ~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ve~~d 319 (394)
T 3ss6_A 240 DGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADLLEINE 319 (394)
T ss_dssp TCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred CCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCEEEeCC
Confidence 99999999999999999999999999999999999999999998877777777889999999999999999999999999
Q ss_pred cccccccc
Q 019555 330 AFSVRNHV 337 (339)
Q Consensus 330 ~F~~~~l~ 337 (339)
+|++..++
T Consensus 320 ~fa~~~~~ 327 (394)
T 3ss6_A 320 AFAAQYLA 327 (394)
T ss_dssp SBHHHHHH
T ss_pred chHHHHHH
Confidence 99987654
No 3
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=1.2e-56 Score=429.56 Aligned_cols=325 Identities=36% Similarity=0.508 Sum_probs=280.5
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCCc
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~~ 90 (339)
|++|+|||+++|||+|+.+.++++++.+|+.+|+++||+|+|+++++||.+++|+..++.. ++.++.+++..+|++..+
T Consensus 1 m~~v~Ivg~~rT~~~~~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 80 (401)
T 1ulq_A 1 MPEAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV 80 (401)
T ss_dssp --CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC
T ss_pred CCceEEEEcccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc
Confidence 3689999999999999988888999999999999999999999999999999998877654 678899999999996568
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccc----cccccc-cccCC
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGM----LKDGLW-DVYND 165 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~ 165 (339)
|.++++++|+|++.||..|+++|++|++|+||++|+|.+++.|......+++..++.....+.+ ...++. +.+..
T Consensus 81 p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 160 (401)
T 1ulq_A 81 AGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGT 160 (401)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCC
T ss_pred cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccccccccc
Confidence 9999999999999999999999999999999999999998866543222222222211000100 112332 22334
Q ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCC
Q 019555 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLR 244 (339)
Q Consensus 166 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~ 244 (339)
..|++.+++|+++||+++|++++|++++|+++..||.+++|+++|.|+++++++++ .++++|+.+|+ +|.|+|+++|
T Consensus 161 ~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~--~~~~~d~~~r~~~t~e~~~~~r 238 (401)
T 1ulq_A 161 ESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEE--ILVEQDEGPRRDTSLEKLAALR 238 (401)
T ss_dssp CCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHHSC
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCc--eeeccccccCCCCCHHHHhhCC
Confidence 56899999999999999999999999999999999999999999999988766542 66899999999 9999999999
Q ss_pred CCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcE
Q 019555 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDY 324 (339)
Q Consensus 245 ~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~ 324 (339)
|+|+++|++|++|||+++|||+++||++++.|++++.+|+++|.|++...++|..++.++..+++++|+++|++++|||+
T Consensus 239 pif~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ 318 (401)
T 1ulq_A 239 PVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGL 318 (401)
T ss_dssp BSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSE
T ss_pred CccCCCCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCHHHcCE
Confidence 99988899999999999999999999999999999999999999999998877777788899999999999999999999
Q ss_pred EEeecccccccccC
Q 019555 325 YEINEAFSVRNHVP 338 (339)
Q Consensus 325 ~~~hd~F~~~~l~~ 338 (339)
+|+||||+++++.+
T Consensus 319 ie~heafa~~~l~~ 332 (401)
T 1ulq_A 319 IELNEAFAAQALAV 332 (401)
T ss_dssp EEECCSBHHHHHHH
T ss_pred EEEecchHHHHHHH
Confidence 99999999987754
No 4
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=100.00 E-value=1.7e-56 Score=427.93 Aligned_cols=326 Identities=47% Similarity=0.665 Sum_probs=293.5
Q ss_pred CCCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc
Q 019555 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (339)
Q Consensus 11 ~~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~ 90 (339)
+|++|+|||+++|||+|+.+.++++++.+|+.+|+++||+|+|+++++||.+++|+..+...+++++++++..+|+++.+
T Consensus 3 ~m~~v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~ 82 (395)
T 4e1l_A 3 AMKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSV 82 (395)
T ss_dssp CCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTS
T ss_pred CCCeEEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCc
Confidence 46899999999999999988888999999999999999999999999999999999887767788999999999997678
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHH
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (339)
|.++++.+|+|++.+|..|+++|++|++++|||+|+|.+++.|+.....+++..++.....+++..+++.+|+....|++
T Consensus 83 p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 162 (395)
T 4e1l_A 83 PSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGI 162 (395)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHH
T ss_pred eEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHH
Confidence 99999999999999999999999999999999999999999776654445555555544444455567778877788999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCC
Q 019555 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (339)
Q Consensus 171 ~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~ 249 (339)
.+++|+++||+++|+++.|++++|+++..|+++++|+++|.|++++.+++++ .++++|+.+|+ +|.|+|++++|+|++
T Consensus 163 ~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~-~~~~~d~~~r~~~t~e~l~~~~~v~~~ 241 (395)
T 4e1l_A 163 TAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKI-ETIDKDEYPKLGMTFEGLSKLKPAFKK 241 (395)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEE-EEECSCSCCCTTCCHHHHHHCCBSSST
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcc-eEECCccccCCCCCHHHHhhCCCccCC
Confidence 9999999999999999999999999999999999999999999987766643 56899999998 999999999999999
Q ss_pred CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 250 ~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
+|++|++||++++|||+++||++++.+++++.+++++|.|++...++|..++.++..+++++|+++|++++|||++|+||
T Consensus 242 ~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~~d 321 (395)
T 4e1l_A 242 DGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDLIEANE 321 (395)
T ss_dssp TCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCSEEEECC
T ss_pred CCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEecC
Confidence 99999999999999999999999999999999999999999999877777777889999999999999999999999999
Q ss_pred cccccccc
Q 019555 330 AFSVRNHV 337 (339)
Q Consensus 330 ~F~~~~l~ 337 (339)
+|++..+.
T Consensus 322 ~fa~~~~~ 329 (395)
T 4e1l_A 322 AFAAQALA 329 (395)
T ss_dssp SBHHHHHH
T ss_pred hhHHHHHH
Confidence 99987654
No 5
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=100.00 E-value=1.9e-55 Score=420.30 Aligned_cols=323 Identities=41% Similarity=0.612 Sum_probs=283.3
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~ 91 (339)
|++|+|||+++|||+|+.+.++++++.+|+.+|+++||+|+|+++++||.+++|++.+...++.++.+++..+|+++.+|
T Consensus 2 m~~v~Ivg~~~t~~g~~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 81 (392)
T 2vu1_A 2 TPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT 81 (392)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE
T ss_pred CCCEEEEEeeecCcccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCce
Confidence 57899999999999999888889999999999999999999999999999999998876667889999999999975489
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHH
Q 019555 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (339)
Q Consensus 92 ~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (339)
.++++++|+|++.||..|+++|++|++|+||++|+|.++..|.. ...+++..++....++.+...++.+|+....|+..
T Consensus 82 ~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (392)
T 2vu1_A 82 AWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHC-AHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTT 160 (392)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEE-ECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHH
T ss_pred EEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccc-cccccccccCcccccchhhhcccccccccchHHHH
Confidence 99999999999999999999999999999999999999876653 11122222221111222222345566656689999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCCC
Q 019555 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250 (339)
Q Consensus 172 a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~ 250 (339)
+++|+++||+++|+++.|++++|+++..||++++|+++|.|++.+.+++. ..+++|+.+|+ +|.|+|+++||+|+++
T Consensus 161 a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~--~~f~~d~~~r~~~t~e~~~~~~~v~~~~ 238 (392)
T 2vu1_A 161 AENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGD--ITVDADEYIRHGATLDSMAKLRPAFDKE 238 (392)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCC--EEECSCSSCCTTCCHHHHHTCCCSSCTT
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCc--eeeccccccCCCCCHHHHhcCCCccCCC
Confidence 99999999999999999999999999999999999999999988765442 46899999999 9999999999999888
Q ss_pred CccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeecc
Q 019555 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (339)
Q Consensus 251 g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd~ 330 (339)
|++|++|||+++|||+|+||++++.|++++.+|+++|.|++.....|..++.++..+++++|+++|++++|||++|+||+
T Consensus 239 g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ie~~d~ 318 (392)
T 2vu1_A 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEA 318 (392)
T ss_dssp CCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCS
T ss_pred CCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEEEeccc
Confidence 99999999999999999999999999999999999999999998777667778899999999999999999999999999
Q ss_pred ccccccc
Q 019555 331 FSVRNHV 337 (339)
Q Consensus 331 F~~~~l~ 337 (339)
|+++.++
T Consensus 319 f~~~~l~ 325 (392)
T 2vu1_A 319 FAAQACA 325 (392)
T ss_dssp BHHHHHH
T ss_pred cHHHHHH
Confidence 9998764
No 6
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=100.00 E-value=6e-55 Score=417.40 Aligned_cols=323 Identities=43% Similarity=0.613 Sum_probs=282.7
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~ 91 (339)
+++|+|||+++|||+|..+.++++++.+|+.+|+++||+|+|+++++||.+++|+..+...++.++.+++..+|++..+|
T Consensus 5 ~~~v~Ivg~~~tp~g~~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 84 (397)
T 1wl4_A 5 SDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVP 84 (397)
T ss_dssp CSCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC
T ss_pred CCcEEEEEcccCCceeCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCcc
Confidence 46899999999999999888889999999999999999999999999999999998876667889999999999965689
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHH
Q 019555 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (339)
Q Consensus 92 ~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (339)
.++++++|+|++.||..|+++|++|++|+||++|+|.++..|.... .+++..++....++.....++.+|+....|+..
T Consensus 85 ~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~ 163 (397)
T 1wl4_A 85 AWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAY-LRTGVKIGEMPLTDSILCDGLTDAFHNCHMGIT 163 (397)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECC-CSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHH
T ss_pred EEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccc-cccccccCcccccchhccccccCccccchHHHH
Confidence 9999999999999999999999999999999999999997665432 122222221111222222355566655789999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCCCCC
Q 019555 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250 (339)
Q Consensus 172 a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~ 250 (339)
+++|+++||+++|+++.|++++|++|..||.+++|++||+|+++++++++ .++++|+..|+ +|.|+|+++||+|+++
T Consensus 164 a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~--~~~~~d~~~r~~~t~e~~~~~rpvfd~~ 241 (397)
T 1wl4_A 164 AENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGL--IEVKTDEFPRHGSNIEAMSKLKPYFLTD 241 (397)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHTSCCSSCCS
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCc--eeeccccccCCCCCHHHHhcCCCccCCC
Confidence 99999999999999999999999999999999999999999998766543 56788998887 9999999999999876
Q ss_pred --CccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEee
Q 019555 251 --GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEIN 328 (339)
Q Consensus 251 --g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~h 328 (339)
|++|++|||+++|||+|+||++++.|++++.+|+++|.|++.....|..++.++..+++++|+++|++++|||++|+|
T Consensus 242 ~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~ 321 (397)
T 1wl4_A 242 GTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIFEIN 321 (397)
T ss_dssp SCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEEC
T ss_pred CCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 899999999999999999999999999999999999999999987776677888999999999999999999999999
Q ss_pred ccccccccc
Q 019555 329 EAFSVRNHV 337 (339)
Q Consensus 329 d~F~~~~l~ 337 (339)
|+|+++.++
T Consensus 322 d~f~~~~l~ 330 (397)
T 1wl4_A 322 EAFAAVSAA 330 (397)
T ss_dssp CSBHHHHHH
T ss_pred cccHHHHHH
Confidence 999987654
No 7
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=100.00 E-value=1.9e-54 Score=412.37 Aligned_cols=313 Identities=35% Similarity=0.455 Sum_probs=279.3
Q ss_pred CCceEEEeeccCcccccC-CCCCCCCHHHHHHHHHHHHHHHc-CCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCC
Q 019555 12 ARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPN 88 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~-~~~~~~~~~~L~~~A~~~Al~da-gl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~ 88 (339)
|++|+|||+++|||+|+. +.+++.++.+|+.+|+++||+|+ |+++++||.+++|+..++.. +++++++++..+|++.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 578999999999999987 88889999999999999999999 99999999999999887765 7789999999999976
Q ss_pred CcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcH
Q 019555 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (339)
Q Consensus 89 ~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (339)
.+|.++++++|+|++.+|.+|+++|++|++|++||+|+|++++.|+.. +.+ ..+ ..+.+++++ ...|
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~---~~~--------~~~-~~~~~~~~~-~~~~ 147 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSH---GVD--------FHP-GLSRNVAKA-AGMM 147 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTT---TBC--------CCT-TCC--------CCC
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCcccc---ccC--------cCc-ccccccccc-cccH
Confidence 789999999999999999999999999999999999999999876541 111 111 122344444 5789
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCCC
Q 019555 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (339)
Q Consensus 169 ~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~ 247 (339)
++.+++|+++||+++|+++.|++++|+++..|+++++|+++|.|++++.++++ +.++++|+.+|+ +|.|+|++++|+|
T Consensus 148 g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~-~~~~~~d~~~r~~~t~e~l~~~~p~f 226 (387)
T 3goa_A 148 GLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGV-LKQFNYDEVIRPETTVEALSTLRPAF 226 (387)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSC-EEEECSCTTCCTTCCHHHHTTSCCSS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCc-ccccccccccCCCCCHHHHhcCCCcc
Confidence 99999999999999999999999999999999999999999999999887665 356899999998 9999999999999
Q ss_pred CC-CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEE
Q 019555 248 KE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYE 326 (339)
Q Consensus 248 ~~-~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~ 326 (339)
++ +|.+|++||++++|||+++||++++.|++++.+++++|.|++...++|..++.++..+++++|+++|++++|||++|
T Consensus 227 ~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve 306 (387)
T 3goa_A 227 DPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFE 306 (387)
T ss_dssp CTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred cCCCCceecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 98 89999999999999999999999999999999999999999999888877778889999999999999999999999
Q ss_pred eecccccccccC
Q 019555 327 INEAFSVRNHVP 338 (339)
Q Consensus 327 ~hd~F~~~~l~~ 338 (339)
+||+|+++++++
T Consensus 307 ~h~~f~~~~~~~ 318 (387)
T 3goa_A 307 MNEAFAAQILPC 318 (387)
T ss_dssp ECCSBHHHHHHH
T ss_pred EeCcchHHHHHH
Confidence 999999987643
No 8
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=100.00 E-value=1.3e-54 Score=414.13 Aligned_cols=319 Identities=34% Similarity=0.474 Sum_probs=275.0
Q ss_pred cccCCCCceEEEeeccCcccccC-CCCCCCCHHHHHHHHHHHHHHHcC----CCCCccCeEEEEeecCCCCCCcHHHHHH
Q 019555 7 SESIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRAN----VKPLLVQEVFFGNVLSANLGQAPARQAA 81 (339)
Q Consensus 7 ~~~~~~~~v~IvG~~~t~~~~~~-~~~~~~~~~~L~~~A~~~Al~dag----l~~~~Id~i~~g~~~~~~~~~~~~~~ia 81 (339)
-+..+|++|+|||+++|||+|+. +.++++++.+|+.+|+++||+|+| +++++||.+++|+..++..++.++.+++
T Consensus 4 ~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va 83 (393)
T 1afw_A 4 LLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAAC 83 (393)
T ss_dssp TTSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHH
T ss_pred hhhhcCCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHH
Confidence 34556789999999999999984 888899999999999999999999 9999999999998877655667899999
Q ss_pred HHcCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccc
Q 019555 82 LGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWD 161 (339)
Q Consensus 82 ~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (339)
..+|++..+|.++++++|+|++.+|..|+++|++|++|++|++|+|.+++.|..... + + ......+...++ .
T Consensus 84 ~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~---~--~--~~~~~~~~~~g~-~ 155 (393)
T 1afw_A 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNP---L--G--MISSEELQKNRE-A 155 (393)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCT---T--C--SCCCHHHHHCTT-G
T ss_pred HHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccc---c--c--cccchhhhhccc-c
Confidence 999996568999999999999999999999999999999999999998865442210 0 0 000000111233 3
Q ss_pred ccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHH
Q 019555 162 VYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKL 240 (339)
Q Consensus 162 ~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~ 240 (339)
|.....|++.+++|+++||+++|+++.|++++|+++..||++++|++||.|+++++ ++ ++++|+.+|+ +|.|+|
T Consensus 156 ~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~--~~---~~~~d~~~r~~~t~e~~ 230 (393)
T 1afw_A 156 KKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD--GS---ICQSDEGPRPNVTAESL 230 (393)
T ss_dssp GGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT--SC---EECSCSSCCSCCCHHHH
T ss_pred cccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC--Cc---eeccccccCCCCCHHHH
Confidence 33336799999999999999999999999999999999999999999999998765 22 6899999998 999999
Q ss_pred hcCCCCCCCC-CccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCC
Q 019555 241 MKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEA 319 (339)
Q Consensus 241 ~~~~~~~~~~-g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~ 319 (339)
+++||+|+++ |++|++||++++|||+++||++++.|++++.+|+++|.|++...++|..++.++.++++++|+++|+++
T Consensus 231 ~~~rpvf~~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~ 310 (393)
T 1afw_A 231 SSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQV 310 (393)
T ss_dssp HHCCBSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCG
T ss_pred hcCCCcccCCCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCCH
Confidence 9999999877 899999999999999999999999999999999999999999988776677788999999999999999
Q ss_pred CCCcEEEeecccccccccC
Q 019555 320 SQIDYYEINEAFSVRNHVP 338 (339)
Q Consensus 320 ~DId~~~~hd~F~~~~l~~ 338 (339)
+|||++|+||+|+++++.+
T Consensus 311 ~dId~ve~h~~ft~~~l~~ 329 (393)
T 1afw_A 311 QDIDIFEINEAFAAQALYC 329 (393)
T ss_dssp GGCSEEEECCSBHHHHHHH
T ss_pred HHCCEEEEeccCHHHHHHH
Confidence 9999999999999987653
No 9
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=100.00 E-value=2.3e-54 Score=416.95 Aligned_cols=317 Identities=34% Similarity=0.507 Sum_probs=273.5
Q ss_pred CCCceEEEeeccCcccccC-CCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCC-CCCcHHHHHHHHcCCCC
Q 019555 11 KARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPN 88 (339)
Q Consensus 11 ~~~~v~IvG~~~t~~~~~~-~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~-~~~~~~~~ia~~lgl~~ 88 (339)
+|++|+|||+++|||+++. +.++++++.+|+.+|+++||+++|+++++||.+++|+..++. .++.++.+++..+|++.
T Consensus 28 ~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~ 107 (442)
T 2wu9_A 28 YGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 107 (442)
T ss_dssp GGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCT
T ss_pred cCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCC
Confidence 4578999999999999986 778899999999999999999999999999999999876543 23567889999999965
Q ss_pred CcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcH
Q 019555 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (339)
Q Consensus 89 ~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (339)
.+|.++++++|+|++.||..|+++|++|++|+||++|+|.++..|.... .. ...++..+++ +|+....|
T Consensus 108 ~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~-----~~-----~~~~~~~~~~-~~~~~~~m 176 (442)
T 2wu9_A 108 TVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWE-----GS-----VNPAVKKFAQ-AQNCLLPM 176 (442)
T ss_dssp TSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCC-----SC-----CCGGGGGCHH-HHHTTSCH
T ss_pred CceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccc-----cc-----cchhhhhccc-cccchhHH
Confidence 6899999999999999999999999999999999999999987654210 00 0011111122 34444679
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeec--CCC-C-CcceEeecCCCCcc-cCHHHHhcC
Q 019555 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMS--SGR-G-KPFIIVDKDEGLEK-FDAAKLMKL 243 (339)
Q Consensus 169 ~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~--~~~-~-~~~~~~~~~~~~r~-~~~~~~~~~ 243 (339)
++.+++|+++||+++|+++.|++++|+++..||++++|+++|.|++++ +++ + ....+++.||.+|+ +|.|+|+++
T Consensus 177 g~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~ 256 (442)
T 2wu9_A 177 GVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKL 256 (442)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcC
Confidence 999999999999999999999999999999999989999999999874 211 0 01246889999998 999999999
Q ss_pred CCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCc
Q 019555 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 244 ~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId 323 (339)
||+|+++|++|++|||+++|||+|+||++++.|++++.+|+++|.|++...+.|..++.++..+++++|+++|++++|||
T Consensus 257 rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DId 336 (442)
T 2wu9_A 257 KPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDID 336 (442)
T ss_dssp CCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCCGGGCC
T ss_pred CCccCCCCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCCHHHCC
Confidence 99999889999999999999999999999999999999999999999999887766777889999999999999999999
Q ss_pred EEEeecccccccccC
Q 019555 324 YYEINEAFSVRNHVP 338 (339)
Q Consensus 324 ~~~~hd~F~~~~l~~ 338 (339)
++|+||+|+++++++
T Consensus 337 ~iE~h~aft~~~l~~ 351 (442)
T 2wu9_A 337 LFEINEAFASQFVYC 351 (442)
T ss_dssp EEEECCSBHHHHHHH
T ss_pred EEEEeCCChHHHHHH
Confidence 999999999987754
No 10
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=100.00 E-value=3.7e-53 Score=404.93 Aligned_cols=325 Identities=48% Similarity=0.724 Sum_probs=282.3
Q ss_pred CCCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc
Q 019555 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (339)
Q Consensus 11 ~~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~ 90 (339)
++++|+|||+++|||+|+.+.+.++++.+|+.+|+++||+|+|+++++||.+++|+..+...++..+.+++..+|++..+
T Consensus 6 ~~~~v~Ivg~~rTp~g~~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~ 85 (395)
T 2ib8_A 6 TLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPIST 85 (395)
T ss_dssp BCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTC
T ss_pred CCCCeEEEecccccccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCc
Confidence 56889999999999999888888899999999999999999999999999999999887777788999999999996568
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHH
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (339)
|.++++++|+|++.||..|+++|++|++|++|++|+|.++..|.... +.+..++.....+...+..+++++....|++
T Consensus 86 p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~ 163 (395)
T 2ib8_A 86 PCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMN--RGSTPYGGVKLEDLIVKDGLTDVYNKIHMGS 163 (395)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEEC--SSBCCTTCEEEEEHHHHHTTEETTTTEEHHH
T ss_pred eEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCccccc--ccccccccccccccccccccccccccchHHH
Confidence 99999999999999999999999999999999999999887654221 1111111100111112234555666678999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCC-C
Q 019555 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK-E 249 (339)
Q Consensus 171 ~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~ 249 (339)
.+++|+++||+++++++.+++++|+|+..||.+++|++++.|+++++. .+|+.+++.|+.+|+++.+++.+++|+|+ +
T Consensus 164 ~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~-~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~ 242 (395)
T 2ib8_A 164 CAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVK-GQPDVVVKEDEEYKRVDFSKVPKLKTVFQKE 242 (395)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCT-TSCCEEECSCSGGGSCCTTTGGGSCCTTCSS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeeccc-CCcceeeccccccccCCHHHHhcCCccccCC
Confidence 999999999999999999999999999999999999999999999775 44557789999999989999999999994 3
Q ss_pred CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 250 ~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
+|++|++|||+++|||+++||++++.|++++.+|+++|.|++....+|..++.++..+++++|+++|++++|||++|+||
T Consensus 243 ~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~D 322 (395)
T 2ib8_A 243 NGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMWEVNE 322 (395)
T ss_dssp SCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECC
T ss_pred CCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcCEEEEcc
Confidence 69999999999999999999999999999999999999999988766666667788999999999999999999999999
Q ss_pred ccccccccC
Q 019555 330 AFSVRNHVP 338 (339)
Q Consensus 330 ~F~~~~l~~ 338 (339)
+|+++.+.+
T Consensus 323 ~f~~~~l~~ 331 (395)
T 2ib8_A 323 AFSLVVLAN 331 (395)
T ss_dssp SBHHHHHHH
T ss_pred ccHHHHHHH
Confidence 999987754
No 11
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=100.00 E-value=1.3e-52 Score=400.34 Aligned_cols=314 Identities=34% Similarity=0.483 Sum_probs=273.0
Q ss_pred CCCCceEEEeeccCccccc-CCCCCCCCHHHHHHHHHHHHHHHc-CCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCC
Q 019555 10 IKARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGI 86 (339)
Q Consensus 10 ~~~~~v~IvG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~Al~da-gl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl 86 (339)
++|++|+|||+++|||+|+ .+.+++.++.+|+.+|+++||+|+ |+++++||.+++|+..++.. ++.++.+++..+|+
T Consensus 2 ~~m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl 81 (390)
T 1wdk_C 2 LNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQI 81 (390)
T ss_dssp CCTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSS
T ss_pred CCCCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCC
Confidence 4468899999999999998 588888999999999999999999 99999999999998877654 47789999999999
Q ss_pred CCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCC
Q 019555 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (339)
Q Consensus 87 ~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (339)
+..+|.++++++|+|++.||..|+++|++|++|++|++|+|.++..|.... .+... .+...+ |....
T Consensus 82 ~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~------~~~~~----~~~~~~---~~~~~ 148 (390)
T 1wdk_C 82 PHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHG------VDPNP----HMSLYA---AKASG 148 (390)
T ss_dssp CTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTT------BCCCG----GGGGTS---CGGGG
T ss_pred CCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccc------cccCc----cccccC---Ccchh
Confidence 667899999999999999999999999999999999999999987554221 01000 000011 11114
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCC
Q 019555 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRP 245 (339)
Q Consensus 167 ~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~ 245 (339)
.|++.+++|+++||+++++++.|++++|+++..||+++.|.++|.|++.+.+.++ ...+++|+.+|+ +|.|+|+++||
T Consensus 149 ~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~-~~~fd~d~~~r~~~t~e~~~~~~~ 227 (390)
T 1wdk_C 149 MMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGF-LKIFDYDETIRPDTTLESLAALKP 227 (390)
T ss_dssp SHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCC-EEEECSCTTCCTTCCHHHHHTSCC
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCc-ceeeccccccCCCCCHHHHhcCCC
Confidence 5899999999999999999999999999999999999999999999987544332 135899999998 99999999999
Q ss_pred CCCC-CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcE
Q 019555 246 SFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDY 324 (339)
Q Consensus 246 ~~~~-~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~ 324 (339)
+|+| +|++|++|||+++|||+++||++++.|++++.+++++|.|++....+|..++.++..+++++|+++|++++|||+
T Consensus 228 i~~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ 307 (390)
T 1wdk_C 228 AFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDF 307 (390)
T ss_dssp SSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCE
T ss_pred cccCCCCcEechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhCcE
Confidence 9998 899999999999999999999999999999999999999999998777666778899999999999999999999
Q ss_pred EEeeccccccccc
Q 019555 325 YEINEAFSVRNHV 337 (339)
Q Consensus 325 ~~~hd~F~~~~l~ 337 (339)
+|+||+|++++++
T Consensus 308 ve~~d~f~~~~~~ 320 (390)
T 1wdk_C 308 IELNEAFAAQALP 320 (390)
T ss_dssp EEECCSBHHHHHH
T ss_pred EEeccCCHHHHHH
Confidence 9999999987654
No 12
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=100.00 E-value=2e-51 Score=394.95 Aligned_cols=316 Identities=36% Similarity=0.539 Sum_probs=268.1
Q ss_pred CCceEEEeeccCccccc-CCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc
Q 019555 12 ARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~ 90 (339)
+++|+|||+++|||+++ .+.++++++.+|+.+|+++||+|+|+++++||.+++|+..++..++..++.++..+|++..+
T Consensus 29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~ 108 (418)
T 2iik_A 29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETV 108 (418)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTS
T ss_pred CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCc
Confidence 47899999999999986 35677899999999999999999999999999999998876554567788888999996468
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHH
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (339)
|.++++++|+|++.||..|+++|++|++|+||++|+|.++..|..... ..... ... .....+++ ..|+.
T Consensus 109 p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~-----~~~~~-~~~---~~~~~~~~--~~~g~ 177 (418)
T 2iik_A 109 PLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPG-----NITSR-LME---KEKARDCL--IPMGI 177 (418)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC----------CCCTT-GGG---CHHHHGGG--SCHHH
T ss_pred eEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCc-----ccchh-hhc---cccccccc--ccHHH
Confidence 999999999999999999999999999999999999999986542210 00000 000 00111121 45889
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeec--CCCCC-cceEeecCCCCcc-cCHHHHhcCCCC
Q 019555 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMS--SGRGK-PFIIVDKDEGLEK-FDAAKLMKLRPS 246 (339)
Q Consensus 171 ~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~--~~~~~-~~~~~~~~~~~r~-~~~~~~~~~~~~ 246 (339)
.+++++++||+++|++++|++++|++|..||.+++|++++.|+++. +.++. .+.++++|+.+|| +|.|+|+++||+
T Consensus 178 ~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~v 257 (418)
T 2iik_A 178 TSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPA 257 (418)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCS
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCc
Confidence 9999999999999999999999999999999889999999999763 22221 1256889999999 999999999999
Q ss_pred CCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchHHHHHHHHHHcCCCCCCCcEEE
Q 019555 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYE 326 (339)
Q Consensus 247 ~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~DId~~~ 326 (339)
|++++++|++||+.++|||+|+||++++.|++++.+|+++|.|++....+|..++.++..+++++|+++|++++|||++|
T Consensus 258 fd~~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~vE 337 (418)
T 2iik_A 258 FKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFE 337 (418)
T ss_dssp SSTTCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ccCCCceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCeee
Confidence 99889999999999999999999999999999999999999999998776766777888999999999999999999999
Q ss_pred eecccccccccC
Q 019555 327 INEAFSVRNHVP 338 (339)
Q Consensus 327 ~hd~F~~~~l~~ 338 (339)
+||+|+++++++
T Consensus 338 ~h~af~~~~~~~ 349 (418)
T 2iik_A 338 INEAFASQAAYC 349 (418)
T ss_dssp ECCSBHHHHHHH
T ss_pred eeccchHHHHHH
Confidence 999999987653
No 13
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=100.00 E-value=2.9e-51 Score=392.35 Aligned_cols=312 Identities=32% Similarity=0.434 Sum_probs=252.1
Q ss_pred CCCceEEEeeccCcccc-cCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCC
Q 019555 11 KARDVCIVGVARTPMGG-FLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIP 87 (339)
Q Consensus 11 ~~~~v~IvG~~~t~~~~-~~~~~~~~~~~~L~~~A~~~Al~d-agl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~ 87 (339)
|+++|+|||+++|||+| +.+.+++.++.+|+.+|+++||++ +|+++++||.+++|+..+... +++++++++..+|++
T Consensus 5 m~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp 84 (407)
T 3svk_A 5 MSEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLP 84 (407)
T ss_dssp --CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCC
T ss_pred CCCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCC
Confidence 45899999999999995 677888999999999999999999 999999999999998877653 678899999999996
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCc
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
..+|.++++.+|+|++.+|..|+++|++|++++|||+|+|++++.|+.....++ ..++ .+..++....
T Consensus 85 ~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~--------~~~~----~~~~~~~~~~ 152 (407)
T 3svk_A 85 ETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAW--------ATDP----ETNYRIGFVP 152 (407)
T ss_dssp TTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------C--------CCCT----TTCCCCCCHH
T ss_pred CCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCccccccccc--------ccCc----hhhccccccC
Confidence 579999999999999999999999999999999999999999987654321111 0111 1222333357
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcc-cCHHHHhcCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPS 246 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~ 246 (339)
|+..+++++++|++++++++.++..+|+++..+...+.|.++|.|++.+. + ...+++|+.+|+ +|.|+|++++|+
T Consensus 153 ~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~--g--~~~~~pd~~~r~~~t~e~l~~~~~v 228 (407)
T 3svk_A 153 QGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQN--G--LVILDHDEHMRPDTTMEGLAKLKTA 228 (407)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTT--S--CEEECSCTTCCTTCCHHHHHTSCBS
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCC--C--ceeeCCccccCCCCCHHHHhhCCCe
Confidence 89999999999999999999999999999999999999999999997422 2 246899999997 999999999999
Q ss_pred CCCCCcc---------------------ccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccccchH
Q 019555 247 FKEGGSV---------------------TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305 (339)
Q Consensus 247 ~~~~g~l---------------------~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 305 (339)
|+|.|.+ |++||++++|||+++||++++.|++++.+|+++|.|++...++|..+..++.
T Consensus 229 f~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~ 308 (407)
T 3svk_A 229 FDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPT 308 (407)
T ss_dssp CC-------------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHH
T ss_pred ecCCCccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHH
Confidence 9876554 9999999999999999999999999999999999999999887777778899
Q ss_pred HHHHHHHHHcCCCCCCCcEEEeecccccccccC
Q 019555 306 LAIPKAIANAGLEASQIDYYEINEAFSVRNHVP 338 (339)
Q Consensus 306 ~a~~~al~~agl~~~DId~~~~hd~F~~~~l~~ 338 (339)
.+++++|+++|++++|||++|+||+|+++++++
T Consensus 309 ~a~~~al~~Agl~~~dId~~e~hdaf~~~~l~~ 341 (407)
T 3svk_A 309 PATRKVLDRAGLTIDDIDLFELNEAFASVVLKF 341 (407)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHCCEEEEeChhHHHHHHH
Confidence 999999999999999999999999999987653
No 14
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=100.00 E-value=4.3e-41 Score=330.33 Aligned_cols=299 Identities=15% Similarity=0.063 Sum_probs=217.5
Q ss_pred CCceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCC------------CCCCcHHHH
Q 019555 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA------------NLGQAPARQ 79 (339)
Q Consensus 12 ~~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~------------~~~~~~~~~ 79 (339)
++..+|||+++|++++..+.++++++.||+.+|+++||+|+|+++++||.+|.|+.... ....++++.
T Consensus 17 PRtPVIVGvG~t~~r~~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 96 (520)
T 4egv_A 17 PRTPVIVGVGQFTERIDLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRS 96 (520)
T ss_dssp TTCEEEEEEEEEEC--------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHH
T ss_pred CCCeEEEEeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHH
Confidence 46678999999999888788889999999999999999999999999888776654322 123468889
Q ss_pred HHHHcCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhh---ccCCCCCcccccc---
Q 019555 80 AALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEAR---KGSRLGHDTIVDG--- 153 (339)
Q Consensus 80 ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~---~~~~~~~~~~~~~--- 153 (339)
++.++|+++ .+..+++.+|+|++++|..|++.|++|++|+||++|+|+||+.|....... ++...........
T Consensus 97 va~~lGl~~-~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (520)
T 4egv_A 97 VARNIGADP-AHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGY 175 (520)
T ss_dssp HHHHHTCCC-SEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-----------------------------
T ss_pred HHHHcCCCC-ceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCcccccccccccccccc
Confidence 999999985 788999999999999999999999999999999999999999776543211 1111110000000
Q ss_pred -ccccccccccCC----CcHHHHHHHHHHHcCCCHHH----HHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcce
Q 019555 154 -MLKDGLWDVYND----FGMGVCAEICANKHTITRDE----QDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFI 224 (339)
Q Consensus 154 -~~~~~~~~~~~~----~~~~~~a~~~~~~~g~~~~~----~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~ 224 (339)
...+.+..++.. ..++..+++++.+|++++++ +..+.+++++++..||. +
T Consensus 176 ~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~-a-------------------- 234 (520)
T 4egv_A 176 DGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPY-S-------------------- 234 (520)
T ss_dssp -----CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTT-S--------------------
T ss_pred chhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCcc-c--------------------
Confidence 000112222221 23677889999999999764 57788999999988874 2
Q ss_pred EeecCCCCcc-cCHHHHhcCCCCCCC--CCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCcc-
Q 019555 225 IVDKDEGLEK-FDAAKLMKLRPSFKE--GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF- 300 (339)
Q Consensus 225 ~~~~~~~~r~-~~~~~~~~~~~~~~~--~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~- 300 (339)
..|+ ++.|++++.+|.+.+ ++.+++.|||+++|||+|+||+|++.|++++.+|+++|.+++....++..+
T Consensus 235 ------~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~ 308 (520)
T 4egv_A 235 ------SAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLL 308 (520)
T ss_dssp ------SSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGG
T ss_pred ------cccCCCCHHHhcccCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccc
Confidence 3333 899999988777642 356789999999999999999999999999999988888888776544333
Q ss_pred -------ccchHHHHHHHHHHcCCCCCCCcEEEeecccccccccC
Q 019555 301 -------TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVRNHVP 338 (339)
Q Consensus 301 -------~~~~~~a~~~al~~agl~~~DId~~~~hd~F~~~~l~~ 338 (339)
..++..+++++|+++|++++|||++|+||||+++++++
T Consensus 309 ~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF~~~~l~~ 353 (520)
T 4egv_A 309 ERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCFPFPVFNI 353 (520)
T ss_dssp GCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSSSHHHHHH
T ss_pred cccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCcHHHHHHH
Confidence 23457899999999999999999999999999998865
No 15
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=99.94 E-value=2.2e-26 Score=220.94 Aligned_cols=199 Identities=20% Similarity=0.269 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCC-----------------C---------CCcHHHHHHHHcCCCC
Q 019555 39 KLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-----------------L---------GQAPARQAALGAGIPN 88 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~-----------------~---------~~~~~~~ia~~lgl~~ 88 (339)
+|+.+|+++||+|+|+++++|| .+++|+..+.. . ...++.+++..+|++
T Consensus 79 ~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~- 157 (416)
T 1e5m_A 79 HFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAK- 157 (416)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCC-
Confidence 8999999999999999999999 79999765531 0 124688999999995
Q ss_pred CcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcH
Q 019555 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (339)
Q Consensus 89 ~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (339)
+|+++++++|+|++.||..|+++|++|++|.+||+|+|.+.+ +.... ++
T Consensus 158 -gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~-~~~~~--------------------~~--------- 206 (416)
T 1e5m_A 158 -GPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAIT-PLSYA--------------------GF--------- 206 (416)
T ss_dssp -SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHH--------------------HH---------
T ss_pred -CceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHH--------------------HH---------
Confidence 699999999999999999999999999999999999998533 22110 00
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCC
Q 019555 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (339)
Q Consensus 169 ~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 248 (339)
. . .+.+..+ + .+|++.+|||+.+
T Consensus 207 ---~-----~------------------------~~~ls~~----------~-----~~p~~~~rpfd~~---------- 229 (416)
T 1e5m_A 207 ---A-----S------------------------ARALSFR----------N-----DDPLHASRPFDKD---------- 229 (416)
T ss_dssp ---H-----H------------------------TTCBCCC----------T-----TCGGGTCCTTBTT----------
T ss_pred ---H-----H------------------------cCCccCC----------C-----CCCccccccCccC----------
Confidence 0 0 0111100 0 1245566666644
Q ss_pred CCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----CccccchHHHHHHHHHHcCCCCCCCc
Q 019555 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 249 ~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~DId 323 (339)
.+|++ ++|||+++||++.+.|++.+.+++++|.|++...+.. ...+.+..++++++|+++|++++|||
T Consensus 230 ~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId 302 (416)
T 1e5m_A 230 RDGFV-------MGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVS 302 (416)
T ss_dssp CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred CCCce-------eeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCC
Confidence 45666 8999999999999999999989899999999988742 22334457899999999999999999
Q ss_pred EEEeeccccc
Q 019555 324 YYEINEAFSV 333 (339)
Q Consensus 324 ~~~~hd~F~~ 333 (339)
++++|++++.
T Consensus 303 ~ve~Hgtgt~ 312 (416)
T 1e5m_A 303 YINAHGTSTP 312 (416)
T ss_dssp EEECCCCSCH
T ss_pred EEEEECCCCc
Confidence 9999999885
No 16
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=99.94 E-value=2.6e-25 Score=213.34 Aligned_cols=199 Identities=21% Similarity=0.285 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCC-----------------CC---------CCcHHHHHHHHcCCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSA-----------------NL---------GQAPARQAALGAGIP 87 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~-----------------~~---------~~~~~~~ia~~lgl~ 87 (339)
.+|+.+|+++||+|||+++++|| ++++|+..+. .. ...++.+++..+|++
T Consensus 75 ~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~ 154 (413)
T 3o04_A 75 THYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAK 154 (413)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCC
Confidence 46999999999999999999999 8999876421 00 123477899999995
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCc
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
+|.++++++|+|++.||..|+++|++|++|+|||+|+|.+.+ +....
T Consensus 155 --gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~-~~~~~------------------------------ 201 (413)
T 3o04_A 155 --GINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPIT-KMSLA------------------------------ 201 (413)
T ss_dssp --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHH------------------------------
T ss_pred --CcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCC-HHHHH------------------------------
Confidence 599999999999999999999999999999999999998665 22110
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
+.. . .+.+... .+++..+||++.+
T Consensus 202 -~~~-----------------------------~-~~~ls~~----------------~~p~~~~~pfd~~--------- 225 (413)
T 3o04_A 202 -GFT-----------------------------A-NKALSLN----------------PDPETACRPFDKD--------- 225 (413)
T ss_dssp -HHH-----------------------------H-TTCBCCC----------------CCTTTSCCTTBTT---------
T ss_pred -HHH-----------------------------h-cccccCC----------------CCCCCCcCCCcCC---------
Confidence 000 0 0111110 1345556665544
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----CccccchHHHHHHHHHHcCCCCCCC
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQI 322 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~DI 322 (339)
.+|++ ++|||+|+||++.+.|++.+.+++++|.|++...+.. ...+.+..++++++|+++|++++||
T Consensus 226 -~~g~~-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 297 (413)
T 3o04_A 226 -RDGFI-------IGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKV 297 (413)
T ss_dssp -CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGC
T ss_pred -CCCce-------EeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence 44666 8999999999999999999999999999999987632 2223446789999999999999999
Q ss_pred cEEEeeccccc
Q 019555 323 DYYEINEAFSV 333 (339)
Q Consensus 323 d~~~~hd~F~~ 333 (339)
|++++|+++|.
T Consensus 298 d~ve~HgtgT~ 308 (413)
T 3o04_A 298 DYINAHGTSTP 308 (413)
T ss_dssp CEEECCCCCCH
T ss_pred CEEEEeCCcCc
Confidence 99999999986
No 17
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.93 E-value=5.9e-25 Score=211.84 Aligned_cols=200 Identities=25% Similarity=0.317 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHcCCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAGIP 87 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~--------------------------~~~~~~~~ia~~lgl~ 87 (339)
.+|+.+|+++||+|+|+++++|| ++++|+..+.. .....+.+|+..+|++
T Consensus 94 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~ 173 (430)
T 1ox0_A 94 SLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGAN 173 (430)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCC
Confidence 37999999999999999999999 58888665431 0114677899999995
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCc
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
+|+++++++|+|++.||..|+++|++|++|.+||+|+|.+.. |.... ++
T Consensus 174 --Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~~--------------------~~-------- 222 (430)
T 1ox0_A 174 --GVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASIT-PFAIA--------------------GF-------- 222 (430)
T ss_dssp --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHH--------------------HH--------
T ss_pred --CceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHH--------------------HH--------
Confidence 599999999999999999999999999999999999998654 22110 00
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
.. .+.+... -+++..+|||+.+
T Consensus 223 ---~~------------------------------~~~ls~~----------------~~p~~~~~pFd~~--------- 244 (430)
T 1ox0_A 223 ---QA------------------------------LTALSTT----------------EDPTRASIPFDKD--------- 244 (430)
T ss_dssp ---HH------------------------------TTCBCCC----------------SSTTSSSCTTBTT---------
T ss_pred ---Hh------------------------------CCCccCC----------------CCCCCCCCCCCCC---------
Confidence 00 0111100 0234455555543
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----CccccchHHHHHHHHHHcCCCCCCC
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQI 322 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~DI 322 (339)
.+|++ ++|||+++||++.+.|++.+.+++++|.|++...+.. ...+.+..++++++|+++|++++||
T Consensus 245 -~~g~~-------~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dI 316 (430)
T 1ox0_A 245 -RNGFV-------MGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQV 316 (430)
T ss_dssp -CCSBC-------BCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred -CCCcc-------ccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHc
Confidence 34666 8999999999999999999999999999999887632 2223456789999999999999999
Q ss_pred cEEEeecccccc
Q 019555 323 DYYEINEAFSVR 334 (339)
Q Consensus 323 d~~~~hd~F~~~ 334 (339)
|++++|++|+..
T Consensus 317 d~ve~Hgtgt~~ 328 (430)
T 1ox0_A 317 AYVNAHGTSTPA 328 (430)
T ss_dssp CCEECCCCSCHH
T ss_pred CEEEEeCCcCcc
Confidence 999999999864
No 18
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.93 E-value=6.5e-25 Score=210.47 Aligned_cols=199 Identities=23% Similarity=0.247 Sum_probs=155.1
Q ss_pred HHHHHHHHHHHHHHcCC-CCCccC----eEEEEeecCC--------------------------CCCCcHHHHHHHHcCC
Q 019555 38 TKLGSIAIECALKRANV-KPLLVQ----EVFFGNVLSA--------------------------NLGQAPARQAALGAGI 86 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl-~~~~Id----~i~~g~~~~~--------------------------~~~~~~~~~ia~~lgl 86 (339)
.+|+.+|+++||+|+|+ ++++|| ++++|+..+. ...+.++.+++..+|+
T Consensus 78 ~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 157 (412)
T 4ewg_A 78 SMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDL 157 (412)
T ss_dssp HHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCC
Confidence 56999999999999999 788888 7888866532 0123577899999999
Q ss_pred CCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCC
Q 019555 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (339)
Q Consensus 87 ~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (339)
+ +|+++++++|+|++.||..|+++|++|++|.+||+|+|.++........ .
T Consensus 158 ~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~~~~-------------------~-------- 208 (412)
T 4ewg_A 158 K--GRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAVFD-------------------T-------- 208 (412)
T ss_dssp C--SCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHH-------------------T--------
T ss_pred C--CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHH-------------------H--------
Confidence 5 6999999999999999999999999999999999999996531110000 0
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCC
Q 019555 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (339)
Q Consensus 167 ~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 246 (339)
...+.. ...+|+..+|||+.+
T Consensus 209 ------------------------------------~~~l~~---------------~~~~p~~~~rpfd~~-------- 229 (412)
T 4ewg_A 209 ------------------------------------LYATST---------------RNDEPHLTPRPFDAK-------- 229 (412)
T ss_dssp ------------------------------------TTCBCC---------------CTTCGGGCCCTTBTT--------
T ss_pred ------------------------------------hhcccc---------------CCCCCCCCCCCCCCC--------
Confidence 000000 002345666766654
Q ss_pred CCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCc---cccchHHHHHHHHHHcCCCCCCCc
Q 019555 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW---FTTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 247 ~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~agl~~~DId 323 (339)
.+|++ ++|||+++||++.+.|++.+.+++++|.|++...+.... ...+...+++++|+++|++++|||
T Consensus 230 --~~G~~-------~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dId 300 (412)
T 4ewg_A 230 --RDGLV-------VGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAIA 300 (412)
T ss_dssp --CCCBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred --CCCCc-------eECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCC
Confidence 45777 899999999999999999999999999999998874321 234457899999999999999999
Q ss_pred EEEeeccccc
Q 019555 324 YYEINEAFSV 333 (339)
Q Consensus 324 ~~~~hd~F~~ 333 (339)
++|+|...+.
T Consensus 301 ~ve~Hgtgt~ 310 (412)
T 4ewg_A 301 YVNAHGTSTD 310 (412)
T ss_dssp EEECCCCCCH
T ss_pred EEEccCCCCc
Confidence 9999998875
No 19
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=99.92 E-value=3.8e-25 Score=212.96 Aligned_cols=202 Identities=24% Similarity=0.299 Sum_probs=153.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCc-cC----eEEEEeecCC--------------------------CCCCcHHHHHHHHcC
Q 019555 37 ATKLGSIAIECALKRANVKPLL-VQ----EVFFGNVLSA--------------------------NLGQAPARQAALGAG 85 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~-Id----~i~~g~~~~~--------------------------~~~~~~~~~ia~~lg 85 (339)
..+|+.+|+++||+|||+++++ || ++++|+..+. ...+..+.+++..+|
T Consensus 87 ~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 166 (428)
T 3kzu_A 87 FIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHK 166 (428)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHcC
Confidence 3689999999999999999998 88 5777765321 123457788999999
Q ss_pred CCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCC
Q 019555 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (339)
Q Consensus 86 l~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (339)
++ +|.++++++|+|++.||..|+++|++|++|++||+|+|.+.. +....
T Consensus 167 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~---------------------------- 215 (428)
T 3kzu_A 167 LR--GPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVS-RISLA---------------------------- 215 (428)
T ss_dssp CC--SCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHH----------------------------
T ss_pred CC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCC-HHHHH----------------------------
Confidence 95 699999999999999999999999999999999999998654 22110
Q ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCC
Q 019555 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (339)
Q Consensus 166 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 245 (339)
+..+ ...+... ...+++..+++++.+
T Consensus 216 ---~~~~------------------------------~~~ls~~--------------~~~~~~~~~~pfd~~------- 241 (428)
T 3kzu_A 216 ---GFAA------------------------------CKALSTE--------------RNDDPTAASRPYDED------- 241 (428)
T ss_dssp ---HHHH------------------------------TTCBCCS--------------CTTSGGGTCCTTBTT-------
T ss_pred ---HHHH------------------------------ccccccC--------------ccCCcccccCCcccC-------
Confidence 0000 0111100 001223344444433
Q ss_pred CCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeC-----CCccccchHHHHHHHHHHcCCCCC
Q 019555 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEAS 320 (339)
Q Consensus 246 ~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~ 320 (339)
.+|++ ++|||+|+||++.+.|++.+.+++++|.|++...+. |...+.+..++++++|+++|++++
T Consensus 242 ---~~G~v-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~ 311 (428)
T 3kzu_A 242 ---RDGFV-------MGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPD 311 (428)
T ss_dssp ---CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred ---CCcee-------ecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 44666 899999999999999999999999999999998763 223334567899999999999999
Q ss_pred CCcEEEeeccccc
Q 019555 321 QIDYYEINEAFSV 333 (339)
Q Consensus 321 DId~~~~hd~F~~ 333 (339)
|||++|+|++||.
T Consensus 312 dId~ve~HgtgT~ 324 (428)
T 3kzu_A 312 EIDYINAHGTSTM 324 (428)
T ss_dssp GCCEEECCCCSST
T ss_pred HeeEEEecCCcch
Confidence 9999999999983
No 20
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.92 E-value=3.8e-24 Score=206.49 Aligned_cols=200 Identities=22% Similarity=0.277 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHcCCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAGIP 87 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~--------------------------~~~~~~~~ia~~lgl~ 87 (339)
.+|+.+|+++||+|+|+++++|| .|++|+..+.. ....++.+++..+|++
T Consensus 99 ~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~ 178 (437)
T 2gqd_A 99 TQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAK 178 (437)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCC
Confidence 57999999999999999999999 99999875531 0124778999999995
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCc
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
+|+++++++|+|++.||..|+++|++|++|.+||+|+|.+.+ +.... ++
T Consensus 179 --gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~--------------------~~-------- 227 (437)
T 2gqd_A 179 --GPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPIT-HMAIA--------------------GF-------- 227 (437)
T ss_dssp --SSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHH--------------------HH--------
T ss_pred --CceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHH--------------------HH--------
Confidence 599999999999999999999999999999999999998654 32110 00
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
. . .+.+... .+|+..+|||+.+
T Consensus 228 ---~-----------------------------~-~~~ls~~----------------~~p~~~~~pfd~~--------- 249 (437)
T 2gqd_A 228 ---S-----------------------------A-SRALSTN----------------DDIETACRPFQEG--------- 249 (437)
T ss_dssp ---H-----------------------------H-TTCBCCC----------------CCTTTSSCTTCTT---------
T ss_pred ---H-----------------------------h-ccCccCC----------------CCCccccCCCCCC---------
Confidence 0 0 0111100 1234455655543
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCC-----ccccchHHHHHHHHHHcCCCCCCC
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQI 322 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~DI 322 (339)
.+|++ ++|||+|+||++.+.|++.+.+++++|.|++...+... ..+.+..++++++|+++|++++||
T Consensus 250 -~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dI 321 (437)
T 2gqd_A 250 -RDGFV-------MGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDV 321 (437)
T ss_dssp -CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGC
T ss_pred -CCCce-------eeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhC
Confidence 34666 89999999999999999999999999999999887432 123345789999999999999999
Q ss_pred cEEEeecccccc
Q 019555 323 DYYEINEAFSVR 334 (339)
Q Consensus 323 d~~~~hd~F~~~ 334 (339)
|++++|++++..
T Consensus 322 d~ve~HgtgT~~ 333 (437)
T 2gqd_A 322 QYLNAHGTSTPV 333 (437)
T ss_dssp CEEECCCCSCHH
T ss_pred CEEEEECCCCcC
Confidence 999999999863
No 21
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.92 E-value=6.5e-25 Score=210.27 Aligned_cols=202 Identities=24% Similarity=0.358 Sum_probs=151.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCe----EEEEeecCCC--------------------------CCCcHHHHHHHHcCC
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~----i~~g~~~~~~--------------------------~~~~~~~~ia~~lgl 86 (339)
..+|+.+|+++||+|+|+++++||. +++|+..++. .....+.+++..+|+
T Consensus 71 ~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 150 (408)
T 1j3n_A 71 FVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGF 150 (408)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCC
Confidence 3689999999999999999999995 6666554321 012467889999999
Q ss_pred CCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCC
Q 019555 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (339)
Q Consensus 87 ~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (339)
+ +|.++++++|+|++.||..|+++|++|++|.+||+|+|.+.. |....
T Consensus 151 ~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~----------------------------- 198 (408)
T 1j3n_A 151 T--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT-PMAIG----------------------------- 198 (408)
T ss_dssp C--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHH-----------------------------
T ss_pred C--CceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHH-----------------------------
Confidence 5 599999999999999999999999999999999999998654 22110
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCC
Q 019555 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (339)
Q Consensus 167 ~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 246 (339)
+... ...+... + .+++..+||++.+
T Consensus 199 --~~~~------------------------------~~~ls~~----------~-----~~p~~~~~pfd~~-------- 223 (408)
T 1j3n_A 199 --AFAV------------------------------MRALSTR----------N-----EEPEKASRPFTLS-------- 223 (408)
T ss_dssp --HHHH------------------------------TTCBCCC----------T-----TCHHHHCCTTBTT--------
T ss_pred --HHHh------------------------------cccccCC----------C-----CCCCcCcccCcCC--------
Confidence 0000 0011000 0 0112233433322
Q ss_pred CCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----CccccchHHHHHHHHHHcCCCCCC
Q 019555 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQ 321 (339)
Q Consensus 247 ~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~D 321 (339)
.+|++ ++|||+++||++.+.|++.+.+++++|.|++...+.. ...+.+...+++++|+++|++++|
T Consensus 224 --~dg~v-------~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~d 294 (408)
T 1j3n_A 224 --RDGFV-------MGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQ 294 (408)
T ss_dssp --CCCBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred --CCceE-------EeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 34666 8999999999999999999988999999999987632 223345578999999999999999
Q ss_pred CcEEEeecccccc
Q 019555 322 IDYYEINEAFSVR 334 (339)
Q Consensus 322 Id~~~~hd~F~~~ 334 (339)
||++++|++||..
T Consensus 295 Id~ve~Hgtgt~~ 307 (408)
T 1j3n_A 295 VGYINAHGTSTPV 307 (408)
T ss_dssp CCEEECCCCSCHH
T ss_pred cCEEEEeCCcCcc
Confidence 9999999999863
No 22
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.92 E-value=3.9e-24 Score=206.50 Aligned_cols=199 Identities=23% Similarity=0.290 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHcCCCC-CccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHcCC
Q 019555 38 TKLGSIAIECALKRANVKP-LLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~-~~Id----~i~~g~~~~~~--------------------------~~~~~~~~ia~~lgl 86 (339)
.+|+.+|+++||+|+|+++ ++|| .+++|+..+.. ....++.+++..+|+
T Consensus 98 ~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 177 (438)
T 2iwz_A 98 TIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKL 177 (438)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhCC
Confidence 5799999999999999998 8888 58888765531 123578899999999
Q ss_pred CCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCC
Q 019555 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (339)
Q Consensus 87 ~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (339)
+ +|+++++++|+|++.||..|+++|++|++|.+||+|+|.+.+ |.... ++
T Consensus 178 ~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~~--------------------~~------- 227 (438)
T 2iwz_A 178 K--GPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PLSLA--------------------GF------- 227 (438)
T ss_dssp C--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHH--------------------HH-------
T ss_pred C--CceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HHHHH--------------------HH-------
Confidence 5 599999999999999999999999999999999999998554 32110 00
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCC
Q 019555 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (339)
Q Consensus 167 ~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 246 (339)
. . .+.+... .+|+..+|||+.+
T Consensus 228 ----~------~------------------------~~~ls~~----------------~~p~~~~~pfd~~-------- 249 (438)
T 2iwz_A 228 ----S------R------------------------ARALSTN----------------SDPKLACRPFHPK-------- 249 (438)
T ss_dssp ----H------H------------------------TTCBCCC----------------SCTTTSCCTTCTT--------
T ss_pred ----H------h------------------------cCCcCCC----------------CCCCcccccCCCC--------
Confidence 0 0 0111100 1234556666544
Q ss_pred CCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----CccccchHHHHHHHHHHcCCCCCC
Q 019555 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQ 321 (339)
Q Consensus 247 ~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~D 321 (339)
++|++ ++|||+++||++.+.|++.+.+++++|.|++...+.. ...+.+..++++++|+++|++++|
T Consensus 250 --~~G~~-------~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~d 320 (438)
T 2iwz_A 250 --RDGFV-------MGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEE 320 (438)
T ss_dssp --CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred --CCCEE-------eeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 45776 8999999999999999999989999999999987642 223345578999999999999999
Q ss_pred CcEEEeeccccc
Q 019555 322 IDYYEINEAFSV 333 (339)
Q Consensus 322 Id~~~~hd~F~~ 333 (339)
||++++|++||.
T Consensus 321 Id~ve~HgtgT~ 332 (438)
T 2iwz_A 321 ISYINAHATSTP 332 (438)
T ss_dssp CCEEECCCCSCH
T ss_pred cCEEEecCCCCc
Confidence 999999999986
No 23
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.92 E-value=5.4e-24 Score=204.27 Aligned_cols=198 Identities=23% Similarity=0.254 Sum_probs=154.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHcCCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAGIP 87 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~--------------------------~~~~~~~~ia~~lgl~ 87 (339)
.+|+.+|+++||+|+|+++++|| ++++|+..+.. ..+.++.+++..+|++
T Consensus 80 ~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 159 (415)
T 1tqy_B 80 TRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMR 159 (415)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCC
Confidence 68999999999999999999999 78888764432 1245788999999995
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCc
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
+|.++++++|+|++.||..|+++|++| +|.+||+|+|.+.+ +.... .+
T Consensus 160 --gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~-~~~~~--------------------~~-------- 207 (415)
T 1tqy_B 160 --GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALD-PWGWV--------------------SQ-------- 207 (415)
T ss_dssp --SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCS-HHHHH--------------------HH--------
T ss_pred --CceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCC-HHHHH--------------------HH--------
Confidence 699999999999999999999999999 99999999998543 22110 00
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
. . .+.+.. + .++++.+|+++.+
T Consensus 208 ----~----------------------------~-~~~ls~-----------~-----~~~~~~~~pfd~~--------- 229 (415)
T 1tqy_B 208 ----I----------------------------A-SGRIST-----------A-----TDPDRAYLPFDER--------- 229 (415)
T ss_dssp ----H----------------------------T-TSCBCC-----------C-----SCGGGSCCTTSTT---------
T ss_pred ----H----------------------------h-ccCccC-----------C-----CCCCCCcCCCCCC---------
Confidence 0 0 000000 0 0144566666644
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCC-CccEEEEeeEEeeeCCCcccc--chHHHHHHHHHHcCCCCCCCcE
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGL-QVIAKIRGFADAAQAPEWFTT--APSLAIPKAIANAGLEASQIDY 324 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~-~~~~~i~g~~~~~~~~~~~~~--~~~~a~~~al~~agl~~~DId~ 324 (339)
.+|++ ++|||+++||++.+.|++.+. +++++|.|++...+....... +..++++++|+++|++++|||+
T Consensus 230 -~~G~~-------~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dId~ 301 (415)
T 1tqy_B 230 -AAGYV-------PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDV 301 (415)
T ss_dssp -CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGCCE
T ss_pred -CCCcc-------eeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHCCE
Confidence 44666 899999999999999999999 889999999998774321111 6789999999999999999999
Q ss_pred EEeeccccc
Q 019555 325 YEINEAFSV 333 (339)
Q Consensus 325 ~~~hd~F~~ 333 (339)
+++|+++|.
T Consensus 302 ve~Hgtgt~ 310 (415)
T 1tqy_B 302 VFADGAGVP 310 (415)
T ss_dssp EECCCCCSH
T ss_pred EEEeCCCCc
Confidence 999999884
No 24
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.91 E-value=1.8e-24 Score=209.61 Aligned_cols=202 Identities=22% Similarity=0.238 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcc-C----eEEEEeecCC--------------------------CCCCcHHHHHHHHcC
Q 019555 37 ATKLGSIAIECALKRANVKPLLV-Q----EVFFGNVLSA--------------------------NLGQAPARQAALGAG 85 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~I-d----~i~~g~~~~~--------------------------~~~~~~~~~ia~~lg 85 (339)
..+|+.+|+++||+|||+++++| | ++++|+..+. ...+..+.+++..+|
T Consensus 102 ~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 181 (451)
T 4ddo_A 102 FIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHR 181 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhc
Confidence 35799999999999999999999 7 6888765331 112346778999999
Q ss_pred CCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCC
Q 019555 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (339)
Q Consensus 86 l~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (339)
++ +|.++++++|+|++.||..|+++|++|++|+|||+|+|.++. +....
T Consensus 182 l~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~-~~~~~---------------------------- 230 (451)
T 4ddo_A 182 FR--GPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFD-KVSLG---------------------------- 230 (451)
T ss_dssp CC--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHH----------------------------
T ss_pred CC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccC-HHHHH----------------------------
Confidence 95 599999999999999999999999999999999999998775 22111
Q ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCC
Q 019555 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (339)
Q Consensus 166 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 245 (339)
..+. ...+...+ ..++...+|+++.+
T Consensus 231 ----~~~~-----------------------------~~~ls~~~--------------~~~~~~~~~pfd~~------- 256 (451)
T 4ddo_A 231 ----GFAA-----------------------------ARALSTGF--------------SEEPVRASRPFDRD------- 256 (451)
T ss_dssp ----HHHH-----------------------------TTCBCCSC--------------TTSGGGSCCTTBTT-------
T ss_pred ----HHHH-----------------------------HhhhccCC--------------CcCccccccccccC-------
Confidence 0000 01111000 00123344555443
Q ss_pred CCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCc-----cccchHHHHHHHHHHcCCCCC
Q 019555 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEAS 320 (339)
Q Consensus 246 ~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~ 320 (339)
++|++ ++|||+|+||++.+.|++.+.+++++|.|++...+.... .+.+...+++++|+++|++++
T Consensus 257 ---~~g~v-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~ 326 (451)
T 4ddo_A 257 ---RDGFV-------MGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPE 326 (451)
T ss_dssp ---CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred ---CCCcE-------EeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 44666 899999999999999999999999999999998753211 112347899999999999999
Q ss_pred CCcEEEeeccccc
Q 019555 321 QIDYYEINEAFSV 333 (339)
Q Consensus 321 DId~~~~hd~F~~ 333 (339)
|||++++|++++.
T Consensus 327 dId~ve~Hgtgt~ 339 (451)
T 4ddo_A 327 QVDYVNAHATSTP 339 (451)
T ss_dssp GCCEEECCCCSCH
T ss_pred HcCEEEecCCcCc
Confidence 9999999999985
No 25
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.91 E-value=5.2e-24 Score=205.09 Aligned_cols=198 Identities=21% Similarity=0.244 Sum_probs=154.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCCC--------------------------CCcHHHHHHHHcCC
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL--------------------------GQAPARQAALGAGI 86 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~~--------------------------~~~~~~~ia~~lgl 86 (339)
..+|+.+|+++||+|+|+++++|| ++++|+..+... .+.++.+++..+|+
T Consensus 92 ~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 171 (428)
T 3mqd_A 92 GTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKI 171 (428)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCC
Confidence 467999999999999999999999 688887644311 23477899999999
Q ss_pred CCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCC
Q 019555 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (339)
Q Consensus 87 ~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (339)
+ +|+++++++|+|++.||..|+++|++|++|.+||+|+|.++........ +
T Consensus 172 ~--gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~~~-~-------------------------- 222 (428)
T 3mqd_A 172 K--GINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFD-A-------------------------- 222 (428)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHH-H--------------------------
T ss_pred C--CceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHHHH-H--------------------------
Confidence 4 6999999999999999999999999999999999999998742110000 0
Q ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCC
Q 019555 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (339)
Q Consensus 167 ~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 246 (339)
.+.+... ...+|+..+|||+.+
T Consensus 223 ------------------------------------~~~ls~~--------------~~~~p~~~~rpfd~~-------- 244 (428)
T 3mqd_A 223 ------------------------------------MGAMSSK--------------YNDTPSTASRAYDKN-------- 244 (428)
T ss_dssp ------------------------------------TTCBCCT--------------TTTSGGGSCCTTBTT--------
T ss_pred ------------------------------------hhhhccc--------------ccCCcccccCcccCC--------
Confidence 0111100 001344566666654
Q ss_pred CCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCC---ccccchHHHHHHHHHHcCCCCCCCc
Q 019555 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE---WFTTAPSLAIPKAIANAGLEASQID 323 (339)
Q Consensus 247 ~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~---~~~~~~~~a~~~al~~agl~~~DId 323 (339)
.+|++ ++|||+++||++.+.|++.+.+++++|.|++...+... ..+.++.++++++|+ |++ +|||
T Consensus 245 --~~G~v-------~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~-~dId 312 (428)
T 3mqd_A 245 --RDGFV-------IAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVT-SKID 312 (428)
T ss_dssp --CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCC-SCCC
T ss_pred --CCCcc-------cccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCc-cccC
Confidence 55777 89999999999999999999999999999999986432 134556899999999 999 9999
Q ss_pred EEEeeccccc
Q 019555 324 YYEINEAFSV 333 (339)
Q Consensus 324 ~~~~hd~F~~ 333 (339)
|||+|...|.
T Consensus 313 ~ve~HgtgT~ 322 (428)
T 3mqd_A 313 YINPHATSTP 322 (428)
T ss_dssp EEECCCCSCH
T ss_pred EEEEeCCCCC
Confidence 9999988774
No 26
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=99.91 E-value=4.4e-24 Score=205.57 Aligned_cols=200 Identities=25% Similarity=0.318 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCC--------------------------CCCCcHHHHHHHHcCCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSA--------------------------NLGQAPARQAALGAGIP 87 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~--------------------------~~~~~~~~~ia~~lgl~ 87 (339)
.+|+.+|+++||+|||+++++|| ++++|+..+. ......+.+++..+|++
T Consensus 89 ~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~ 168 (427)
T 3ho9_A 89 IQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLR 168 (427)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCCC
Confidence 57899999999999999999999 5777765431 01224677899999995
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCc
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
+|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |..... +
T Consensus 169 --Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~~~--------------------~-------- 217 (427)
T 3ho9_A 169 --GPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKAST-PLGVGG--------------------F-------- 217 (427)
T ss_dssp --SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHH--------------------H--------
T ss_pred --CCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHHH--------------------H--------
Confidence 699999999999999999999999999999999999999875 322110 0
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
.. .+.+... + .+++..+|+++.+
T Consensus 218 ---~~------------------------------~~~ls~~----------~-----~~~~~~~~pfd~~--------- 240 (427)
T 3ho9_A 218 ---GA------------------------------ARALSTR----------N-----DNPQAASRPWDKE--------- 240 (427)
T ss_dssp ---HH------------------------------TTCBCCC----------T-----TCHHHHCCTTBTT---------
T ss_pred ---Hh------------------------------ccCcccC----------C-----CCCCcccCCccCC---------
Confidence 00 0011000 0 0122234444433
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeC-----CCccccchHHHHHHHHHHcCCCCCCC
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQI 322 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~DI 322 (339)
.+|++ ++|||+++||++.+.|++.+.+++++|.|++...+. +...+.+...+++++|+++|++++||
T Consensus 241 -~~G~v-------~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dI 312 (427)
T 3ho9_A 241 -RDGFV-------LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQI 312 (427)
T ss_dssp -CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred -CCCce-------eeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence 45777 899999999999999999999999999999998763 22234456789999999999999999
Q ss_pred cEEEeeccccc
Q 019555 323 DYYEINEAFSV 333 (339)
Q Consensus 323 d~~~~hd~F~~ 333 (339)
|++|+|..+|.
T Consensus 313 d~ve~HgtgT~ 323 (427)
T 3ho9_A 313 GYVNAHGTSTP 323 (427)
T ss_dssp CEEECCCCSCH
T ss_pred cEEEecCCcCC
Confidence 99999976664
No 27
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.91 E-value=1.6e-23 Score=201.64 Aligned_cols=200 Identities=22% Similarity=0.285 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCC--------------CC-------------Cc-HHH----HHH
Q 019555 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------LG-------------QA-PAR----QAA 81 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~--------------~~-------------~~-~~~----~ia 81 (339)
.+|+.+|+++||+|+|+++++|| ++++|+..+.. .+ ++ .+. +++
T Consensus 74 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia 153 (424)
T 1tqy_A 74 SQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVA 153 (424)
T ss_dssp HHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHH
Confidence 57999999999999999999999 69998775532 00 01 133 899
Q ss_pred HHcCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccc
Q 019555 82 LGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWD 161 (339)
Q Consensus 82 ~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (339)
..||++ +|+++++++|+|++.||..|+++|++|++|.+||+|+|.+.+ |.... ++
T Consensus 154 ~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~--------------------~~-- 208 (424)
T 1tqy_A 154 WAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PIVVA--------------------CF-- 208 (424)
T ss_dssp HHHTCC--SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHH--------------------HH--
T ss_pred HhcCCC--CceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HHHHH--------------------HH--
Confidence 999995 599999999999999999999999999999999999998654 32110 00
Q ss_pred ccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHh
Q 019555 162 VYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLM 241 (339)
Q Consensus 162 ~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 241 (339)
.. .+.+... -.+|++.+|||+.+
T Consensus 209 ---------------~~------------------------~~~ls~~---------------~~~p~~~~rpfd~~--- 231 (424)
T 1tqy_A 209 ---------------DA------------------------IRATTAR---------------NDDPEHASRPFDGT--- 231 (424)
T ss_dssp ---------------HH------------------------TTCBCCC---------------CSCGGGCCCTTBTT---
T ss_pred ---------------Hh------------------------hccccCC---------------CCCCCCCccCCCCC---
Confidence 00 0111100 02345666766654
Q ss_pred cCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCC-----ccccchHHHHHHHHHHcC
Q 019555 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAG 316 (339)
Q Consensus 242 ~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~ag 316 (339)
.+|++ ++|||+++||++.+.|++.+.+++++|.|++...+... ..+.+..++++++|+++|
T Consensus 232 -------~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~ag 297 (424)
T 1tqy_A 232 -------RDGFV-------LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESR 297 (424)
T ss_dssp -------CCCBC-------EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHT
T ss_pred -------CCcee-------eecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 45666 89999999999999999999999999999999877422 222345789999999999
Q ss_pred CCCCCCcEEEeeccccc
Q 019555 317 LEASQIDYYEINEAFSV 333 (339)
Q Consensus 317 l~~~DId~~~~hd~F~~ 333 (339)
++++|||++++|++++.
T Consensus 298 l~~~dId~ve~Hgtgt~ 314 (424)
T 1tqy_A 298 TDATDIDYINAHGSGTR 314 (424)
T ss_dssp CCGGGCCEEECCCCCCH
T ss_pred CCHHHCCEEEecCccCc
Confidence 99999999999999885
No 28
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.91 E-value=6.3e-24 Score=203.72 Aligned_cols=198 Identities=21% Similarity=0.248 Sum_probs=149.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCCC--------------------------CCcHHHHHHHHcCCC
Q 019555 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL--------------------------GQAPARQAALGAGIP 87 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~~--------------------------~~~~~~~ia~~lgl~ 87 (339)
.+|+.+|+++||+|+|+ +++| ++++|+..+... ....+.+|+..+|++
T Consensus 84 ~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~ 161 (416)
T 2wge_A 84 QRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGAR 161 (416)
T ss_dssp HHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccC
Confidence 46999999999999998 4555 388887765431 114677899999994
Q ss_pred CCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCc
Q 019555 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (339)
Q Consensus 88 ~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (339)
+|.++++++|+|++.||..|+++|++|++|++||+|+|.++. +....
T Consensus 162 --gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~-~~~~~------------------------------ 208 (416)
T 2wge_A 162 --AGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIE-ALPIA------------------------------ 208 (416)
T ss_dssp --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCC-HHHHH------------------------------
T ss_pred --CCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccc-hHHHH------------------------------
Confidence 699999999999999999999999999999999999998775 21110
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 168 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
+... ...+... + .+++..+||++.+
T Consensus 209 -~~~~------------------------------~~~l~~~----------~-----~~~~~~~~pfd~~--------- 233 (416)
T 2wge_A 209 -AFSM------------------------------MRAMSTR----------N-----DEPERASRPFDKD--------- 233 (416)
T ss_dssp -HHHT------------------------------TTCBCCC----------T-----TSGGGSCCTTBTT---------
T ss_pred -HHHh------------------------------cchhhcc----------c-----cCCcccccccccC---------
Confidence 0000 0111100 0 0123444544432
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeC-----CCccccchHHHHHHHHHHcCCCCCCC
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQI 322 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~DI 322 (339)
.+|++ ++|||+|+||++.+.|++.+.+++++|.|++...+. |...+.+...+++++|+++|++++||
T Consensus 234 -~dg~v-------~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dI 305 (416)
T 2wge_A 234 -RDGFV-------FGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADI 305 (416)
T ss_dssp -CCCBC-------BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred -CCCcc-------ccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHC
Confidence 33555 899999999999999999999999999999988753 22234456789999999999999999
Q ss_pred cEEEeeccccc
Q 019555 323 DYYEINEAFSV 333 (339)
Q Consensus 323 d~~~~hd~F~~ 333 (339)
|++|+|+++|.
T Consensus 306 d~ve~HgtgT~ 316 (416)
T 2wge_A 306 DHVNAHGTATP 316 (416)
T ss_dssp CEEECCCCCCH
T ss_pred CEEEECCCCCc
Confidence 99999999886
No 29
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.90 E-value=2.1e-23 Score=201.04 Aligned_cols=202 Identities=23% Similarity=0.303 Sum_probs=154.3
Q ss_pred HHHHHHHHHHHHHHHcCC-CCCccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHcC
Q 019555 37 ATKLGSIAIECALKRANV-KPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl-~~~~Id----~i~~g~~~~~~--------------------------~~~~~~~~ia~~lg 85 (339)
..+|+.+|+++||+|+|+ ++++|| .+++|+..+.. ....++.+++..+|
T Consensus 88 ~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 167 (431)
T 2ix4_A 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHC
Confidence 468999999999999999 888888 68888765430 01247789999999
Q ss_pred CCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCC
Q 019555 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (339)
Q Consensus 86 l~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (339)
++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.++. +.... ++
T Consensus 168 l~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~--------------------~~------ 218 (431)
T 2ix4_A 168 FQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSID-ALSVA--------------------GF------ 218 (431)
T ss_dssp CC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHH--------------------HH------
T ss_pred CC--CceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHH--------------------HH------
Confidence 95 599999999999999999999999999999999999998876 21110 00
Q ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCC
Q 019555 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (339)
Q Consensus 166 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 245 (339)
. . .+.+... + + .++++.+||++.+
T Consensus 219 -----~------~------------------------~~~ls~~-----~----~-----~~~~~~~~pfd~~------- 242 (431)
T 2ix4_A 219 -----S------R------------------------SRALSTK-----F----N-----SSPQEASRPFDCD------- 242 (431)
T ss_dssp -----H------H------------------------TTCBCCT-----T----T-----TCGGGSCCTTBTT-------
T ss_pred -----H------h------------------------ccccCcc-----c----c-----CCcccccccCCCC-------
Confidence 0 0 0111100 0 0 1234455555533
Q ss_pred CCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----CccccchHHHHHHHHHHcCCCCC
Q 019555 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEAS 320 (339)
Q Consensus 246 ~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~ 320 (339)
.+|++ ++|||+|+||++.+.|++.+.+++++|.|++...+.. ...+.+...+++++|+++|++++
T Consensus 243 ---~~g~~-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~ 312 (431)
T 2ix4_A 243 ---RDGFV-------IGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPN 312 (431)
T ss_dssp ---CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred ---CCCce-------eecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 34566 8999999999999999999989999999999987632 22334557899999999999999
Q ss_pred CCcEEEeeccccc
Q 019555 321 QIDYYEINEAFSV 333 (339)
Q Consensus 321 DId~~~~hd~F~~ 333 (339)
|||++++|+.+|.
T Consensus 313 dId~ve~HgtgT~ 325 (431)
T 2ix4_A 313 QIDYVNAHATSTP 325 (431)
T ss_dssp GCCEEECCCCSCH
T ss_pred HcCEEEEeCCcCc
Confidence 9999999988874
No 30
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.89 E-value=5.1e-23 Score=196.92 Aligned_cols=198 Identities=21% Similarity=0.263 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCe-----EEEEeecCCC-------------C--------------CCcHHHHHHHHc
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQE-----VFFGNVLSAN-------------L--------------GQAPARQAALGA 84 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~-----i~~g~~~~~~-------------~--------------~~~~~~~ia~~l 84 (339)
..+|+.+|+++||+|+|+++++||. +++|+..+.. . ...++.+++..+
T Consensus 71 ~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 150 (406)
T 2vba_A 71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF 150 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhc
Confidence 3679999999999999999988886 9999876542 1 135678899999
Q ss_pred CCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccC
Q 019555 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN 164 (339)
Q Consensus 85 gl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (339)
|++ +|+++++++|+|++.||..|+++|++|++|.+||+|+|.++. +...
T Consensus 151 gl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~~~---------------------------- 199 (406)
T 2vba_A 151 KIH--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCW-EMAC---------------------------- 199 (406)
T ss_dssp TCC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH-HHHH----------------------------
T ss_pred cCC--CceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-hHHH----------------------------
Confidence 995 699999999999999999999999999999999999998865 2100
Q ss_pred CCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCC
Q 019555 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (339)
Q Consensus 165 ~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 244 (339)
. +.. .+.+..+ ++ .+|+..+|||+.+
T Consensus 200 ----~------~~~------------------------~~~ls~~---------~~-----~~p~~~~~pfd~~------ 225 (406)
T 2vba_A 200 ----E------FDA------------------------MGALSTK---------YN-----DTPEKASRTYDAH------ 225 (406)
T ss_dssp ----H------HHH------------------------TTCBCCS---------CT-----TSGGGSCCTTBTT------
T ss_pred ----H------Hhh------------------------ccccccc---------cC-----CCCccccCcCcCC------
Confidence 0 000 0111100 00 1244566666655
Q ss_pred CCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCc---cccchHHHHHHHHHHcCCCCCC
Q 019555 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW---FTTAPSLAIPKAIANAGLEASQ 321 (339)
Q Consensus 245 ~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~agl~~~D 321 (339)
++|++ ++|||+++||++.+.|++.+.+++++|.|++...+.... .+.+...+++++|+++| +|
T Consensus 226 ----~~G~v-------~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~al~~ag---~d 291 (406)
T 2vba_A 226 ----RDGFV-------IAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVD---TP 291 (406)
T ss_dssp ----CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTCC---SC
T ss_pred ----CCceE-------eeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhCC---CC
Confidence 55777 899999999999999999999999999999998774211 13455789999999999 99
Q ss_pred CcEEEeeccccc
Q 019555 322 IDYYEINEAFSV 333 (339)
Q Consensus 322 Id~~~~hd~F~~ 333 (339)
||++|+|+++|.
T Consensus 292 Id~ve~HgtgT~ 303 (406)
T 2vba_A 292 IDYLNSHGTSTP 303 (406)
T ss_dssp CCEEECCCCSCH
T ss_pred ccEEEeeCccCc
Confidence 999999999986
No 31
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.89 E-value=1.5e-22 Score=210.75 Aligned_cols=195 Identities=26% Similarity=0.288 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCe----EEEEeecCCCCC-------------------CcHHHHHHHHcCCCCCcceee
Q 019555 38 TKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANLG-------------------QAPARQAALGAGIPNSVVCTT 94 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~----i~~g~~~~~~~~-------------------~~~~~~ia~~lgl~~~~~~~~ 94 (339)
.+|+.+++++||+|||+++++||. |++|+..+++.. ..++.+++..+|+. +|+++
T Consensus 117 ~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--Gps~t 194 (917)
T 2hg4_A 117 QRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLE--GPAMT 194 (917)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCC--SCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCC--CCeEe
Confidence 468999999999999999999995 888877665321 13677899999995 59999
Q ss_pred ecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHHHH
Q 019555 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174 (339)
Q Consensus 95 v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 174 (339)
++++|+|++.||..|+++|++|++|.+||+|+|.++. +.... .+
T Consensus 195 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~-p~~~~--------------------~~--------------- 238 (917)
T 2hg4_A 195 VDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSS-PGAFT--------------------EF--------------- 238 (917)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-THHHH--------------------HH---------------
T ss_pred ecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccC-hhhhH--------------------hh---------------
Confidence 9999999999999999999999999999999999876 22110 00
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCCCCccc
Q 019555 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254 (339)
Q Consensus 175 ~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~g~l~ 254 (339)
... ..++++..||+|+.. .+|++
T Consensus 239 -----------------------------~~~-----------------~~ls~~g~~~pFd~~----------adG~~- 261 (917)
T 2hg4_A 239 -----------------------------RSQ-----------------GGLAADGRCKPFSKA----------ADGFG- 261 (917)
T ss_dssp -----------------------------TTS-----------------SCBCTTSCCCTTBTT----------CCCBC-
T ss_pred -----------------------------hhc-----------------cCcCCccccCccccc----------ccCCC-
Confidence 000 113455666666533 44666
Q ss_pred cccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccc-----cchHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT-----TAPSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 255 ~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~-----~~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
+||||+++||++.+.|++.+.+++++|.|++.+.+...... .+...+++++|+++|++++|||++|+|+
T Consensus 262 ------~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHg 335 (917)
T 2hg4_A 262 ------LAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHG 335 (917)
T ss_dssp ------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCC
T ss_pred ------CcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeecc
Confidence 89999999999999999999999999999999987543222 2335899999999999999999999999
Q ss_pred cccc
Q 019555 330 AFSV 333 (339)
Q Consensus 330 ~F~~ 333 (339)
+||.
T Consensus 336 tgT~ 339 (917)
T 2hg4_A 336 TGTR 339 (917)
T ss_dssp CCCT
T ss_pred CCCc
Confidence 9985
No 32
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.89 E-value=2.3e-22 Score=193.70 Aligned_cols=198 Identities=23% Similarity=0.251 Sum_probs=148.0
Q ss_pred HHHHHHHHHHHHHHcCCC---CCccCeEEEEeecCCCC--------------------------CCcHHHHHHHHcCCCC
Q 019555 38 TKLGSIAIECALKRANVK---PLLVQEVFFGNVLSANL--------------------------GQAPARQAALGAGIPN 88 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~---~~~Id~i~~g~~~~~~~--------------------------~~~~~~~ia~~lgl~~ 88 (339)
.+|+.+|+++||+|||++ +++| .+++|+..++.. ....+.+|+..+|++
T Consensus 100 ~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~- 177 (434)
T 2gp6_A 100 QRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAK- 177 (434)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCC-
T ss_pred HHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCC-
Confidence 579999999999999983 3334 577887655320 114678899999995
Q ss_pred CcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcH
Q 019555 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (339)
Q Consensus 89 ~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (339)
+|+++++++|+|++.||..|+++|++|++|.+||+|+|.++. +..... +
T Consensus 178 -Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~--------------------~--------- 226 (434)
T 2gp6_A 178 -AGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIE-AVPIAG--------------------F--------- 226 (434)
T ss_dssp -SCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCC-HHHHHH--------------------H---------
T ss_pred -CCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH--------------------H---------
Confidence 699999999999999999999999999999999999998875 211100 0
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCC-CccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCC
Q 019555 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSG-LFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (339)
Q Consensus 169 ~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 247 (339)
. + .. .+..+ . ..+++.+||++.+
T Consensus 227 ---~---------------------~--------~~~~ls~~---------~------~~p~~~~~pfd~~--------- 250 (434)
T 2gp6_A 227 ---A---------------------Q--------MRIVMSTN---------N------DDPAGACRPFDRD--------- 250 (434)
T ss_dssp ---H---------------------T--------TTSSCCCC---------T------TCTTTSCCSSBTT---------
T ss_pred ---H---------------------H--------HHHHhcCC---------C------CCCCCceeccccc---------
Confidence 0 0 00 00000 0 0234556666643
Q ss_pred CCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCC-----CccccchHHHHHHHHHHcCCCCCCC
Q 019555 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQI 322 (339)
Q Consensus 248 ~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~DI 322 (339)
.+|++ ++|||+|+||++.+.+++.+.+++++|.|++...+.. ...+.+..++++++|+++|++++||
T Consensus 251 -~~g~v-------~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dI 322 (434)
T 2gp6_A 251 -RDGFV-------FGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDI 322 (434)
T ss_dssp -CCCCC-------BBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTE
T ss_pred -CCCcc-------eecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHc
Confidence 44666 8999999999999999988888899999999987632 2223355789999999999999999
Q ss_pred cEEEeeccccc
Q 019555 323 DYYEINEAFSV 333 (339)
Q Consensus 323 d~~~~hd~F~~ 333 (339)
|++++| +|..
T Consensus 323 d~ve~H-gtgt 332 (434)
T 2gp6_A 323 DHVNAH-ATGT 332 (434)
T ss_dssp EEEECC-CCSC
T ss_pred CEEEEe-CCcC
Confidence 999999 5543
No 33
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.89 E-value=3.1e-22 Score=208.25 Aligned_cols=196 Identities=21% Similarity=0.273 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCe----EEEEeecCCCCC------------------CcHHHHHHHHcCCCCCcceeee
Q 019555 38 TKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANLG------------------QAPARQAALGAGIPNSVVCTTI 95 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~----i~~g~~~~~~~~------------------~~~~~~ia~~lgl~~~~~~~~v 95 (339)
.+|+.+++++||+|||+++++||. +++|+..+++.. ...+.+|+..+|+. +|++++
T Consensus 96 ~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--Gps~tv 173 (915)
T 2qo3_A 96 QRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLE--GPSISV 173 (915)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBC--SCEEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCC--CCEEEE
Confidence 579999999999999999999995 888877655421 13678899999995 599999
Q ss_pred cccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHHHHH
Q 019555 96 NKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEIC 175 (339)
Q Consensus 96 ~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 175 (339)
+++|+|++.||..|+++|++|++|.+|++|+|.++. |.... .+ .
T Consensus 174 ~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~-p~~~~--------------------~~------------~--- 217 (915)
T 2qo3_A 174 DTACSSSLVALHLAVESLRKGESSMAVVGGAAVMAT-PGVFV--------------------DF------------S--- 217 (915)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSS-THHHH--------------------HH------------H---
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcC-HHHHH--------------------HH------------h---
Confidence 999999999999999999999999999999999876 32110 00 0
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCCCCcccc
Q 019555 176 ANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTA 255 (339)
Q Consensus 176 ~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~g~l~~ 255 (339)
. . ..++++..||+|+.+ .+|++
T Consensus 218 -------------------------~-~--------------------~~ls~~g~~~~Fd~~----------adG~v-- 239 (915)
T 2qo3_A 218 -------------------------R-Q--------------------RALAADGRSKAFGAG----------ADGFG-- 239 (915)
T ss_dssp -------------------------T-T--------------------TCBCSSCCCCTTBTT----------CCCBC--
T ss_pred -------------------------h-h--------------------cccCCCCCcccccCC----------CCcee--
Confidence 0 0 113455566666655 45777
Q ss_pred ccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCcc-----ccchHHHHHHHHHHcCCCCCCCcEEEeecc
Q 019555 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF-----TTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (339)
Q Consensus 256 ~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~-----~~~~~~a~~~al~~agl~~~DId~~~~hd~ 330 (339)
+||||+++||++.+.|++.+.+++++|.|++...+..... +.+...+++++|+++|++++|||++|+|++
T Consensus 240 -----~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~Hgt 314 (915)
T 2qo3_A 240 -----FSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGT 314 (915)
T ss_dssp -----BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCC
T ss_pred -----ecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCC
Confidence 8999999999999999999999999999999988643221 234478999999999999999999999999
Q ss_pred cccc
Q 019555 331 FSVR 334 (339)
Q Consensus 331 F~~~ 334 (339)
+|..
T Consensus 315 gT~~ 318 (915)
T 2qo3_A 315 GTAL 318 (915)
T ss_dssp CCTT
T ss_pred CCcc
Confidence 8863
No 34
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.87 E-value=8.7e-22 Score=205.74 Aligned_cols=191 Identities=18% Similarity=0.179 Sum_probs=152.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCC-------------------CCCcHHHHHHHHcCCCCCcceee
Q 019555 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-------------------LGQAPARQAALGAGIPNSVVCTT 94 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~-------------------~~~~~~~~ia~~lgl~~~~~~~~ 94 (339)
..|+.+++++||+|||++++++| ++++|...+++ .....+.+|+..+|+. +|+++
T Consensus 81 ~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--GPs~t 158 (965)
T 3hhd_A 81 LRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR--GPSIA 158 (965)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC--SCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCC--CCeee
Confidence 45999999999999999999999 78888655432 1234778999999994 69999
Q ss_pred ecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHHHH
Q 019555 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174 (339)
Q Consensus 95 v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 174 (339)
++++|+|++.||..|+++|++|++|.+|++|+|.+++ |.... +...
T Consensus 159 vdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~-p~~~~-------------------------------~~~~-- 204 (965)
T 3hhd_A 159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLK-PNTSV-------------------------------QFLR-- 204 (965)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCC-HHHHH-------------------------------HHHH--
T ss_pred ecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHH-------------------------------HHHh--
Confidence 9999999999999999999999999999999999876 32110 0000
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCCCCccc
Q 019555 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254 (339)
Q Consensus 175 ~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~g~l~ 254 (339)
. ..++++..||+|+.+ .+|++
T Consensus 205 ----------------------------~--------------------~~ls~~g~~~~Fd~~----------adG~~- 225 (965)
T 3hhd_A 205 ----------------------------L--------------------GMLSPEGTCKAFDTA----------GNGYC- 225 (965)
T ss_dssp ----------------------------H--------------------TCBCTTCCCCTTBTT----------CCSBC-
T ss_pred ----------------------------c--------------------cCcCCCCccccchhc----------cCCcc-
Confidence 0 113456677777755 56888
Q ss_pred cccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCccc------cchHHHHHHHHHHcCCCCCCCcEEEee
Q 019555 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT------TAPSLAIPKAIANAGLEASQIDYYEIN 328 (339)
Q Consensus 255 ~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~------~~~~~a~~~al~~agl~~~DId~~~~h 328 (339)
+|||++++||++.+.|+ ++++.|.|++.+.+.....+ .+...+++++|++||++++||||+|.|
T Consensus 226 ------~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaH 295 (965)
T 3hhd_A 226 ------RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAH 295 (965)
T ss_dssp ------BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred ------ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhcccccc
Confidence 79999999999988765 46799999999987543221 234689999999999999999999999
Q ss_pred ccccc
Q 019555 329 EAFSV 333 (339)
Q Consensus 329 d~F~~ 333 (339)
..+|.
T Consensus 296 gTgT~ 300 (965)
T 3hhd_A 296 GTGTK 300 (965)
T ss_dssp CCCCT
T ss_pred CCCCC
Confidence 99884
No 35
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=99.87 E-value=7.9e-22 Score=182.15 Aligned_cols=109 Identities=17% Similarity=0.089 Sum_probs=96.5
Q ss_pred cCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCcc
Q 019555 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (339)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas 101 (339)
+|++.++....++.+..+|+.+|+++||+++|+++++||.+++++.+++...+..+..++..+|++ .++.++++++|+|
T Consensus 36 ~~gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aCas 114 (313)
T 1zow_A 36 MTGIKERHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTG-KVASMDQLAACSG 114 (313)
T ss_dssp HHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCC-SCCEEEEECGGGH
T ss_pred hhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEEEECCcCHH
Confidence 455555544556789999999999999999999999999999998877665667889999999997 4799999999999
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEccccccC
Q 019555 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
+..||..|+++|++|++++|||+|+|.++.
T Consensus 115 ~~~al~~A~~~i~~g~~~~vLv~g~e~~s~ 144 (313)
T 1zow_A 115 FMYSMITAKQYVQSGDYHNILVVGADKLSK 144 (313)
T ss_dssp HHHHHHHHHHHHHTTSCSCEEEEEEEEGGG
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEccccc
Confidence 999999999999999999999999998764
No 36
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=99.86 E-value=1.2e-21 Score=182.55 Aligned_cols=99 Identities=18% Similarity=0.088 Sum_probs=91.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHH
Q 019555 32 LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 32 ~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~ 111 (339)
.++.+..+|+.+|+++||+++|+++++||.+++++..++...+..+..++..||++ +++.++++.+|+|+..||..|+.
T Consensus 56 ~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~A~~ 134 (335)
T 1u6e_A 56 ADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGAAAD 134 (335)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHHHHH
Confidence 34678999999999999999999999999999998877666678899999999996 58999999999999999999999
Q ss_pred HHHcCCCceEEEEccccccC
Q 019555 112 SIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 112 ~I~sG~~~~vLv~g~e~~s~ 131 (339)
+|++|++++|||+|+|.++.
T Consensus 135 ~i~~g~~~~vLv~g~e~~s~ 154 (335)
T 1u6e_A 135 MIRGGGAATMLVVGTEKLSP 154 (335)
T ss_dssp HHHHTSCSSEEEEEEEECGG
T ss_pred HHHcCCCCEEEEEEEccccc
Confidence 99999999999999998874
No 37
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=99.86 E-value=4.1e-21 Score=178.99 Aligned_cols=109 Identities=21% Similarity=0.188 Sum_probs=97.1
Q ss_pred CcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccH
Q 019555 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (339)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~ 102 (339)
|++.++....++.+..+|+.+|+++||+++|+++++||.+++++.+++...+..+..++..||++++++.++++.+|+|+
T Consensus 51 tgi~~r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~s~ 130 (333)
T 4dfe_A 51 TGIHARYFAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVCSGF 130 (333)
T ss_dssp HCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEECGGGHH
T ss_pred cCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeCcccHHH
Confidence 44444433456789999999999999999999999999999999887766678899999999996578999999999999
Q ss_pred HHHHHHHHHHHHcCCCceEEEEccccccC
Q 019555 103 MKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
..||..|+.+|++|.+++|||+|+|.++.
T Consensus 131 ~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 159 (333)
T 4dfe_A 131 AYAVATADSFIRSGQHRTALVIGAETFSR 159 (333)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEeecccc
Confidence 99999999999999999999999999875
No 38
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=99.85 E-value=8.3e-21 Score=174.91 Aligned_cols=96 Identities=21% Similarity=0.197 Sum_probs=88.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~ 114 (339)
.+..+|+.+|+++||+++|+++++||.+++++..+....+..+..++..+|++. .|.++++++|+|+..||..|+++|+
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~~C~s~~~al~~A~~~i~ 126 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKG-VYAFDISAACSGFIYALDIADSFIK 126 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTT-CEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-ceEEecCccchHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999988776656678999999999973 6999999999999999999999999
Q ss_pred cCCCceEEEEccccccC
Q 019555 115 LGINDIVVAGGMESMSN 131 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (339)
+|++++|||+|+|.++.
T Consensus 127 ~g~~~~vlv~g~e~~s~ 143 (309)
T 2ebd_A 127 SGKAKNVLVIGAEKLSE 143 (309)
T ss_dssp TTSCSEEEEEEEEEGGG
T ss_pred CCCCCEEEEEEeccccc
Confidence 99999999999998764
No 39
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=99.84 E-value=1e-19 Score=168.83 Aligned_cols=109 Identities=16% Similarity=0.132 Sum_probs=97.3
Q ss_pred cCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCcc
Q 019555 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (339)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas 101 (339)
+|++..+.-..+++++.+|+.+|+++||+++|+++++||.+++++.+++...+..+..++..||++ .++.++++.+|++
T Consensus 43 ~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~~C~s 121 (323)
T 3il3_A 43 RSGIRERRIAAEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID-DAISFDLAAACTG 121 (323)
T ss_dssp HTCCCEEECCCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS-SCEEEEECCGGGH
T ss_pred hcCCcEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC-CccEEEECCccHH
Confidence 355544433445789999999999999999999999999999999888766678899999999997 6899999999999
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEccccccC
Q 019555 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
+..||..|+.+|++|.+++|||+|+|.+|.
T Consensus 122 ~~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 151 (323)
T 3il3_A 122 FVYALSVADQFIRAGKVKKALVIGSDLNSR 151 (323)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEeecccc
Confidence 999999999999999999999999999885
No 40
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=99.83 E-value=2.2e-20 Score=173.19 Aligned_cols=97 Identities=20% Similarity=0.163 Sum_probs=88.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
++.+..+|+.+|+++||+++|+++++||.+++++..+....+..+.+++..+|+ .+|.++++++|+|+..||..|+++
T Consensus 46 ~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl--~~~~~~v~~aCas~~~al~~A~~~ 123 (322)
T 1ub7_A 46 EDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHAL 123 (322)
T ss_dssp TTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC--CCEEEeeCccchHHHHHHHHHHHH
Confidence 467899999999999999999999999999999877654456688999999999 479999999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|+++++||+|+|.++.
T Consensus 124 i~~g~~~~vlv~g~e~~s~ 142 (322)
T 1ub7_A 124 VEAGLAQKVLAVGAEALSK 142 (322)
T ss_dssp HHTTSCSEEEEEEEECGGG
T ss_pred HHcCCCCEEEEEEechhcc
Confidence 9999999999999998763
No 41
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=99.83 E-value=3.4e-20 Score=171.55 Aligned_cols=98 Identities=14% Similarity=0.150 Sum_probs=90.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
++.+..+|+.+|+++||+++|+++++||.+++++..+....+..+.+++..+|+++ +|.++++++|+|+..||..|+++
T Consensus 47 ~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~aCas~~~al~~A~~~ 125 (317)
T 1hnj_A 47 PNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG-CPAFDVAAACAGFTYALSVADQY 125 (317)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCS-SCEEEECCGGGHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-CeEEeeCcccHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999988776656778999999999974 79999999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|++++|||+|+|.++.
T Consensus 126 i~~g~~~~vlv~g~e~~s~ 144 (317)
T 1hnj_A 126 VKSGAVKYALVVGSDVLAR 144 (317)
T ss_dssp HHTTSCSEEEEEEEECHHH
T ss_pred HHCCCCCEEEEEEechhcc
Confidence 9999999999999998763
No 42
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=99.82 E-value=4.3e-20 Score=172.92 Aligned_cols=99 Identities=17% Similarity=0.155 Sum_probs=92.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
+++++.+|+.+|+++||+++|+++++||.+++++.+++...+..+..++..||++++++.++++.+|+|+..||..|+.+
T Consensus 64 ~~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~ 143 (345)
T 3s21_A 64 QDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAARM 143 (345)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHHH
Confidence 56889999999999999999999999999999988877666788999999999976689999999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|.+++|||+|+|.++.
T Consensus 144 i~~g~~~~vLvvg~e~~s~ 162 (345)
T 3s21_A 144 LERGEIDYALVVDGETANL 162 (345)
T ss_dssp HHHTSCSEEEEEEEECCHH
T ss_pred HHCCCCCEEEEEEEcccch
Confidence 9999999999999999875
No 43
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=99.82 E-value=7.8e-20 Score=170.75 Aligned_cols=98 Identities=19% Similarity=0.199 Sum_probs=90.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
++.+..+|+.+|+++||+++|+++++||.+++++.+++...+..+.+++..||++. ++.++++++|+|+..||..|+++
T Consensus 56 ~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~-~~~~~v~~aCas~~~Al~~A~~~ 134 (339)
T 1mzj_A 56 PDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADN-AGGFDLSAACAGFCHALSIAADA 134 (339)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTT-CEEEEEECGGGHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCC-ccEEEccccchHHHHHHHHHHHH
Confidence 46788999999999999999999999999999988777656678899999999974 79999999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|.+++|||+|+|.++.
T Consensus 135 i~~G~~~~vLv~g~e~~s~ 153 (339)
T 1mzj_A 135 VESGGSRHVLVVATERMTD 153 (339)
T ss_dssp HHHSSCSCEEEEEEEEGGG
T ss_pred HHCCCCCEEEEEEEccccc
Confidence 9999999999999998763
No 44
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=99.81 E-value=1.8e-19 Score=169.14 Aligned_cols=100 Identities=22% Similarity=0.124 Sum_probs=93.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHH
Q 019555 32 LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 32 ~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~ 111 (339)
.++++..+|+.+|+++||+++|+++++||.+++++.+++...+..+..++..||++.+++.++++.+|+++..||..|+.
T Consensus 61 ~~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~ 140 (354)
T 4efi_A 61 DAQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMN 140 (354)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHH
Confidence 35688999999999999999999999999999998887766788899999999996578999999999999999999999
Q ss_pred HHHcCCCceEEEEccccccC
Q 019555 112 SIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 112 ~I~sG~~~~vLv~g~e~~s~ 131 (339)
+|++|.+++|||+|+|.+|.
T Consensus 141 ~i~~g~~~~vLvvg~e~~s~ 160 (354)
T 4efi_A 141 LIQTGAAKRVLLAVGDTISK 160 (354)
T ss_dssp HHHTTSCSEEEEEEEECGGG
T ss_pred HHHCCCCCEEEEEEechhcc
Confidence 99999999999999999875
No 45
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=99.81 E-value=2.8e-19 Score=168.51 Aligned_cols=99 Identities=18% Similarity=0.125 Sum_probs=92.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
+++++.+|+.+|+++||+++|+++++||.+++++++++...+..+..++..||++++++.++++.+|+|+..||..|+.+
T Consensus 76 ~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~ 155 (365)
T 3gwa_A 76 PRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGL 155 (365)
T ss_dssp TTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHH
Confidence 46899999999999999999999999999999998876666788899999999986789999999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|.+++|||+|+|.+|.
T Consensus 156 i~~g~~~~vLvvg~e~~s~ 174 (365)
T 3gwa_A 156 VETGAARCVLLLTADTYSK 174 (365)
T ss_dssp HHTTSCSEEEEEEEECGGG
T ss_pred HHcCCCCEEEEEEEchhhc
Confidence 9999999999999999986
No 46
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=99.80 E-value=1.1e-19 Score=172.07 Aligned_cols=96 Identities=15% Similarity=0.013 Sum_probs=86.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec-ccCccHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSI 113 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~-~~cas~~~al~~A~~~I 113 (339)
.+..+|+.+|+++||+++|+++++||.+++++.++ ...+..+..++..||++..++.+++. .+|+|+..||..|+.+|
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i 171 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTG-IIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLA 171 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998775 34567889999999997446999997 89999999999999999
Q ss_pred HcCCCceEEEEccccccC
Q 019555 114 QLGINDIVVAGGMESMSN 131 (339)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~ 131 (339)
++|.+++|||+|+|.++.
T Consensus 172 ~~g~~~~vLv~g~e~~s~ 189 (374)
T 2h84_A 172 KASPRNRILVVCTEVCSL 189 (374)
T ss_dssp TTCTTCEEEEEEEECCGG
T ss_pred HcCCCCEEEEEEEEecch
Confidence 999999999999999874
No 47
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=99.80 E-value=4.7e-19 Score=166.54 Aligned_cols=98 Identities=15% Similarity=0.106 Sum_probs=91.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
++++..+|+.+|+++||+++|+++++||.+++++.+++...+..+..++..||++ .++.++++.+|+++..||..|+.+
T Consensus 70 ~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~Al~~A~~~ 148 (359)
T 3h78_A 70 PEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR-HIPVLDIRAQASGLLYGLQMARGQ 148 (359)
T ss_dssp TTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC-CCcEEEECCHhHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999998887666677899999999997 689999999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|.+++|||+|+|.+|.
T Consensus 149 i~sG~~~~vLvvg~e~~S~ 167 (359)
T 3h78_A 149 ILAGLARHVLVVCGEVLSK 167 (359)
T ss_dssp HHTTSCSEEEEEEEEECGG
T ss_pred HHCCCcCEEEEEEEchhcc
Confidence 9999999999999999875
No 48
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=99.80 E-value=3.9e-20 Score=176.16 Aligned_cols=96 Identities=13% Similarity=0.043 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee-cccCccHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSI 113 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v-~~~cas~~~al~~A~~~I 113 (339)
.+..+|+.+|+++||+++|+++++||.+++++.++ ...+..+..++..||++..++.+++ +.+|+|+..||..|+.+|
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i 189 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-FIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYV 189 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998877 4466788999999999754678888 899999999999999999
Q ss_pred HcCCCceEEEEccccccC
Q 019555 114 QLGINDIVVAGGMESMSN 131 (339)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~ 131 (339)
++|.+++|||+|+|.++.
T Consensus 190 ~~G~~~~vLv~g~e~~s~ 207 (393)
T 1ted_A 190 RAHPAMKALVVCIELCSV 207 (393)
T ss_dssp HHSTTCEEEEEEEEECGG
T ss_pred HcCCCCEEEEEEEEeccc
Confidence 999999999999999874
No 49
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=99.80 E-value=2.7e-19 Score=169.73 Aligned_cols=96 Identities=14% Similarity=0.013 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee-cccCccHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSI 113 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v-~~~cas~~~al~~A~~~I 113 (339)
.+..+|+.+|+++||+++|+++++||.+++++..+ ...+..+..++..||++..++.+++ +++|+|+..||..|+.+|
T Consensus 82 ~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i 160 (382)
T 1u0m_A 82 REAKSRVPAVIQRALDDAELLATDIDVIIYVSCTG-FMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFC 160 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSS-CCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999988776 4456788999999999744799999 899999999999999999
Q ss_pred HcCCCceEEEEccccccC
Q 019555 114 QLGINDIVVAGGMESMSN 131 (339)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~ 131 (339)
++|.+++|||+|+|.++.
T Consensus 161 ~~g~~~~vLv~g~e~~s~ 178 (382)
T 1u0m_A 161 TAYPEANALIVACEFCSL 178 (382)
T ss_dssp HHSTTCEEEEEEEEEGGG
T ss_pred HcCCCCEEEEEEEeccch
Confidence 999999999999998764
No 50
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.80 E-value=2.6e-19 Score=201.89 Aligned_cols=205 Identities=17% Similarity=0.175 Sum_probs=151.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccC--------eEEEEeecCCC------------------------CCCcHHHHHHH-H
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQ--------EVFFGNVLSAN------------------------LGQAPARQAAL-G 83 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id--------~i~~g~~~~~~------------------------~~~~~~~~ia~-~ 83 (339)
..+|+.+++++||+|+|+++++|+ ++++|+..+.. .....+.+++. .
T Consensus 2647 ~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~ 2726 (3089)
T 3zen_D 2647 VALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSY 2726 (3089)
T ss_dssp HHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHH
Confidence 367999999999999999998885 58888764321 01224556654 4
Q ss_pred cCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccccc
Q 019555 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (339)
Q Consensus 84 lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (339)
+|+ .+|+++++++|+|++.||..|+++|++|++|.+|++|+|.++...+.. +
T Consensus 2727 lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~----------------------f---- 2778 (3089)
T 3zen_D 2727 VGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIG----------------------F---- 2778 (3089)
T ss_dssp TCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH----------------------H----
T ss_pred cCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHH----------------------H----
Confidence 699 469999999999999999999999999999999999999975311100 0
Q ss_pred CCCcHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhc
Q 019555 164 NDFGMGVCA-EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMK 242 (339)
Q Consensus 164 ~~~~~~~~a-~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 242 (339)
..++.++ ..++..++ .+++..||+++.+
T Consensus 2779 --~~~~als~~~~~~~~~---------------------------------------------~sp~~~crpFd~~---- 2807 (3089)
T 3zen_D 2779 --GDMAATADTEMMRAKG---------------------------------------------ISDSKFSRANDRR---- 2807 (3089)
T ss_dssp --HHHTCBCCHHHHHHTT---------------------------------------------CCTTTSCCSSBTT----
T ss_pred --HHhhhhhcchhhhhcc---------------------------------------------CCcccccCccccC----
Confidence 0000000 00111000 2456777877765
Q ss_pred CCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCcc----c--------cchHHHHHH
Q 019555 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF----T--------TAPSLAIPK 310 (339)
Q Consensus 243 ~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~----~--------~~~~~a~~~ 310 (339)
.+|++ +||||+++||++.+.|++.|.++++.|.|.+.+.+..... + .+...++++
T Consensus 2808 ------~dG~v-------~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~ 2874 (3089)
T 3zen_D 2808 ------RLGFL-------EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRESTLAR 2874 (3089)
T ss_dssp ------CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGSHHHH
T ss_pred ------CCCEE-------EeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHHHHHH
Confidence 66888 7999999999999999999999999888888766532111 1 122368999
Q ss_pred HHHHcCCCCCCCcEEEeeccccc
Q 019555 311 AIANAGLEASQIDYYEINEAFSV 333 (339)
Q Consensus 311 al~~agl~~~DId~~~~hd~F~~ 333 (339)
+|+++|++++||||+|.|+++|.
T Consensus 2875 AL~~AGl~p~DIdyVEaHGTGT~ 2897 (3089)
T 3zen_D 2875 SLAQLGVGADDIAVISKHDTSTL 2897 (3089)
T ss_dssp HHHTTTCCGGGEEEEECCCCCCT
T ss_pred HHHHcCCCHHHeeEEEEecCCcc
Confidence 99999999999999999999986
No 51
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=99.79 E-value=7.2e-19 Score=164.90 Aligned_cols=99 Identities=18% Similarity=0.182 Sum_probs=92.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHH
Q 019555 32 LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 32 ~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~ 111 (339)
.++++..+|+.+|+++||+++|+++++||.+++++++++...+..+..++.+||++ ..++++++.+|+++..||..|..
T Consensus 57 ~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~~~C~g~~~aL~~A~~ 135 (350)
T 4ewp_A 57 TAEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVSAACAGYCYGVAQADA 135 (350)
T ss_dssp CSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEeecchhhHHHHHHHhhh
Confidence 45789999999999999999999999999999999988777788999999999998 46899999999999999999999
Q ss_pred HHHcCCCceEEEEccccccC
Q 019555 112 SIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 112 ~I~sG~~~~vLv~g~e~~s~ 131 (339)
+|++|.++.|||+++|.+|.
T Consensus 136 ~i~~g~~~~~Lvv~~E~~s~ 155 (350)
T 4ewp_A 136 LVRSGTARHVLVVGVERLSD 155 (350)
T ss_dssp HHHTTSCSEEEEEEEEEGGG
T ss_pred hhhCCCccceeEeeeeecee
Confidence 99999999999999998874
No 52
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.79 E-value=7.5e-20 Score=192.17 Aligned_cols=167 Identities=16% Similarity=0.156 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHcCCC-CCc----cC----eEEEEeecCCCC------------------------CCcHHHHHHH-H
Q 019555 38 TKLGSIAIECALKRANVK-PLL----VQ----EVFFGNVLSANL------------------------GQAPARQAAL-G 83 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~-~~~----Id----~i~~g~~~~~~~------------------------~~~~~~~ia~-~ 83 (339)
..|+.+++.+||++||++ |.+ |+ ++++|+..+... ....+.+++. .
T Consensus 1013 qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~ 1092 (1688)
T 2pff_A 1013 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1092 (1688)
T ss_dssp TTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHH
Confidence 579999999999999997 655 34 445554433210 0124456666 6
Q ss_pred cCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccccc
Q 019555 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (339)
Q Consensus 84 lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (339)
||+ .+|+++++++|+|++.||..|++.|++|++|++||+|+|.++...+.. |
T Consensus 1093 LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~----------------------F---- 1144 (1688)
T 2pff_A 1093 ISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFE----------------------F---- 1144 (1688)
T ss_dssp CCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTT----------------------T----
T ss_pred cCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHH----------------------H----
Confidence 888 469999999999999999999999999999999999999876422211 0
Q ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcC
Q 019555 164 NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243 (339)
Q Consensus 164 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 243 (339)
..++.++ -+. ..+. .-.+|++.+||++..
T Consensus 1145 --a~mgaLS--------~~~--------------------~e~a----------------~G~~Pd~~cRPFd~~----- 1173 (1688)
T 2pff_A 1145 --GNMKATS--------NTL--------------------EEFE----------------HGRTPAEMSRPATTT----- 1173 (1688)
T ss_dssp --TTTSCSC--------CTT--------------------TTTT----------------SSCCSSSSCCSSSSS-----
T ss_pred --Hhccccc--------cCh--------------------hhhh----------------cCCChhhccCcCccC-----
Confidence 0000000 000 0000 013577888887765
Q ss_pred CCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeee
Q 019555 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQ 295 (339)
Q Consensus 244 ~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~ 295 (339)
++|++ ++|||+++||++.+.|++.|.++++.|.|++.+.+
T Consensus 1174 -----rdGfv-------~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsD 1213 (1688)
T 2pff_A 1174 -----RNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATD 1213 (1688)
T ss_dssp -----CCCCC-------CCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCC
T ss_pred -----CCCCc-------cccceEEEEeCcHHHHHHCCCceEEEEEEEEEECC
Confidence 66888 79999999999999999999999999999998876
No 53
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.79 E-value=4.5e-19 Score=191.71 Aligned_cols=165 Identities=16% Similarity=0.184 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHcCCC-CCc----cC----eEEEEeecCCC------------------------CCCcHHHHHHH-H
Q 019555 38 TKLGSIAIECALKRANVK-PLL----VQ----EVFFGNVLSAN------------------------LGQAPARQAAL-G 83 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~-~~~----Id----~i~~g~~~~~~------------------------~~~~~~~~ia~-~ 83 (339)
..|+.+++.+||++||++ |.+ |+ ++++|+..+.. .....+.+++. .
T Consensus 1212 ~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~ 1291 (1887)
T 2uv8_A 1212 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1291 (1887)
T ss_dssp HHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHH
Confidence 568999999999999994 766 44 45556543320 01235567777 4
Q ss_pred cCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccccc
Q 019555 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (339)
Q Consensus 84 lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (339)
+|+ .+|.++++++|+|++.||..|++.|++|++|++||+|+|.++. .... .|
T Consensus 1292 lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~--~~~~--------------------~f---- 1343 (1887)
T 2uv8_A 1292 ISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQE--EGSF--------------------EF---- 1343 (1887)
T ss_dssp TCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH--HHHH--------------------HH----
T ss_pred cCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCCh--HHHH--------------------HH----
Confidence 899 4699999999999999999999999999999999999998753 1110 00
Q ss_pred CCCcHHHHHHHHHHHcCCC---HHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHH
Q 019555 164 NDFGMGVCAEICANKHTIT---RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL 240 (339)
Q Consensus 164 ~~~~~~~~a~~~~~~~g~~---~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 240 (339)
...+.. .++++ + + .+|++.|||++..
T Consensus 1344 -------------~~m~als~~~~e~~--------------------~-----------g-----~~p~~~~RPfd~~-- 1372 (1887)
T 2uv8_A 1344 -------------GNMKATSNTLEEFE--------------------H-----------G-----RTPAEMSRPATTT-- 1372 (1887)
T ss_dssp -------------HHTTCBCCHHHHHH--------------------T-----------T-----CCGGGSCCTTBTT--
T ss_pred -------------HHhhhhccchhhhc--------------------c-----------c-----CCCccCcCCCccc--
Confidence 001110 11110 0 0 3567888988866
Q ss_pred hcCCCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeC
Q 019555 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA 296 (339)
Q Consensus 241 ~~~~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~ 296 (339)
++|++ .+|||+++||++.+.|++.|.+++++|.|++.+.+.
T Consensus 1373 --------r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg 1413 (1887)
T 2uv8_A 1373 --------RNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDK 1413 (1887)
T ss_dssp --------CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCC
T ss_pred --------CCCcc-------cccceEEEEEccHHHHHHCCCceEEEEeeeEEecCC
Confidence 67998 799999999999999999999999999999999874
No 54
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=99.79 E-value=1.4e-18 Score=164.95 Aligned_cols=94 Identities=20% Similarity=0.091 Sum_probs=87.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHHc
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQL 115 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~s 115 (339)
+..+|+.+|+++||+++|+++++||.|++++++++...+..+..++..||++ .+.++++.+|+++..||..|+.+|++
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~--~~~~dv~~aC~g~~~aL~~A~~~i~~ 193 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG--GFAFDMNVACSSATFGLKTAADFVGG 193 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC--SEEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC--CeEEEECCccHHHHHHHHHHHHHHHC
Confidence 4689999999999999999999999999998887766678889999999993 79999999999999999999999999
Q ss_pred CCCceEEEEccccccC
Q 019555 116 GINDIVVAGGMESMSN 131 (339)
Q Consensus 116 G~~~~vLv~g~e~~s~ 131 (339)
|.+++|||+|+|.+|.
T Consensus 194 g~~~~vLvvg~E~~S~ 209 (392)
T 3led_A 194 GSVDAVLMVNPEICSG 209 (392)
T ss_dssp TSCSEEEEEEEEEGGG
T ss_pred CCCCEEEEEeehhcCC
Confidence 9999999999999875
No 55
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.78 E-value=1.2e-18 Score=188.01 Aligned_cols=168 Identities=15% Similarity=0.202 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHHcCCC-CCc----cC----eEEEEeecCCC-------C-----------------CCcHHHHHHH-H
Q 019555 38 TKLGSIAIECALKRANVK-PLL----VQ----EVFFGNVLSAN-------L-----------------GQAPARQAAL-G 83 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~-~~~----Id----~i~~g~~~~~~-------~-----------------~~~~~~~ia~-~ 83 (339)
..|+.+++.+||.++|++ |.+ |+ ++++|+..+.. . ....+.+++. .
T Consensus 1187 ~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A 1187 TLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp HHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHh
Confidence 568999999999999998 666 44 56666654430 0 0125567777 4
Q ss_pred cCCCCCcceeeecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCcccccccccccccccc
Q 019555 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (339)
Q Consensus 84 lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (339)
||+ .+|.++++++|+|++.||..|++.|++|++|++||+|+|.++. .... .|
T Consensus 1267 lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~--~~~~--------------------~f---- 1318 (1878)
T 2uv9_A 1267 LSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQE--EGSY--------------------EF---- 1318 (1878)
T ss_dssp CCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCH--HHHH--------------------HH----
T ss_pred cCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCCh--HHHH--------------------HH----
Confidence 899 4699999999999999999999999999999999999998653 1110 00
Q ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcC
Q 019555 164 NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243 (339)
Q Consensus 164 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 243 (339)
.. |....-+.++++ .+ .+|++.|||++..
T Consensus 1319 --~~--------m~als~~~de~a-------------------------------~g-----~~p~~~~RPfd~~----- 1347 (1878)
T 2uv9_A 1319 --AN--------MGATSNAKEEFA-------------------------------RG-----REPGEMSRPTSTT----- 1347 (1878)
T ss_dssp --HH--------HTCBCCHHHHHT-------------------------------TT-----CCTTSSCCSSBTT-----
T ss_pred --HH--------hhhhccchhhhh-------------------------------cC-----CCcccCcCCCccC-----
Confidence 00 000000011110 00 3578899998866
Q ss_pred CCCCCCCCccccccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeC
Q 019555 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA 296 (339)
Q Consensus 244 ~~~~~~~g~l~~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~ 296 (339)
++|++ .+||++++||++.+.|++.|.++++.|.|++.+++.
T Consensus 1348 -----r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg 1388 (1878)
T 2uv9_A 1348 -----RNGFM-------ESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDK 1388 (1878)
T ss_dssp -----CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCC
T ss_pred -----CCCCc-------ccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCC
Confidence 67998 799999999999999999999999999999998863
No 56
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=99.78 E-value=4.3e-19 Score=162.92 Aligned_cols=92 Identities=21% Similarity=0.264 Sum_probs=81.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~ 114 (339)
.+..+|+.+|+++||+++|+++++||.+++++.++.. ..+..++..|| .|.++++.+|+|+..+|..|+.+|+
T Consensus 53 ~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~---~~A~~va~~Lg----ipafdV~~ACsg~~~AL~~Aa~~I~ 125 (347)
T 3lma_A 53 MAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQN---VTANYVARHLK----IPFLCLFGACSTSMESIAISSALID 125 (347)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSS---TTHHHHHHHHC----CCEEEBCCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCch---hHHHHHHHHhC----CCEEEecChhHHHHHHHHHHHHHHh
Confidence 3557899999999999999999999999999887732 25667777774 4799999999999999999999999
Q ss_pred cCCCceEEEEccccccCCc
Q 019555 115 LGINDIVVAGGMESMSNAP 133 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~~~ 133 (339)
+|.+++|||+|+|.+|+.+
T Consensus 126 sG~~~~VLVVGaE~~S~ae 144 (347)
T 3lma_A 126 GGFAKRALAATSSHNATAE 144 (347)
T ss_dssp TTSCSEEEEEEEECGGGTT
T ss_pred cCCCCEEEEEEeccccchh
Confidence 9999999999999999743
No 57
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=99.77 E-value=9.8e-19 Score=162.74 Aligned_cols=94 Identities=17% Similarity=0.190 Sum_probs=85.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~ 114 (339)
.+..+|+.+|+++||+++|+ ++||.+++++.++....+..+..++..||+++ ++.++++++|+|+..||..|+++|+
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~~-~~~~~v~~aCas~~~Al~~A~~~i~ 127 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLVG-ALAFDLSAAATGFVYGLASVGSLIS 127 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCTT-SEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCCC-CcEEEEcCcChHHHHHHHHHHHHHH
Confidence 57899999999999999999 89999999987765545567899999999974 8999999999999999999999999
Q ss_pred cCCCceEEEEccccccC
Q 019555 115 LGINDIVVAGGMESMSN 131 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (339)
+|.+++|||+|+|.++.
T Consensus 128 ~g~~~~vLv~g~e~~s~ 144 (331)
T 2x3e_A 128 AGLADSALLVGVDTFSH 144 (331)
T ss_dssp TTSCSEEEEEEEECGGG
T ss_pred cCCCCEEEEEEeecccc
Confidence 99999999999998763
No 58
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.77 E-value=2.2e-18 Score=181.89 Aligned_cols=94 Identities=17% Similarity=0.034 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCC-cceeeecccCccHHHHHHHHHHHHHc
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS-VVCTTINKVCSSGMKAVMLAAQSIQL 115 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~-~~~~~v~~~cas~~~al~~A~~~I~s 115 (339)
..+|+.+|+++||+++|+++++||.++++++.+ ...+..+..++..||++.. ++.++++.+|+++..||..|..+|++
T Consensus 689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~s 767 (979)
T 3tsy_A 689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSG-VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAEN 767 (979)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHh
Confidence 566999999999999999999999999988544 4467889999999999632 35899999999999999999999999
Q ss_pred CCCceEEEEccccccC
Q 019555 116 GINDIVVAGGMESMSN 131 (339)
Q Consensus 116 G~~~~vLv~g~e~~s~ 131 (339)
|.+++|||+|+|.++.
T Consensus 768 G~~~~vLvvg~e~~~~ 783 (979)
T 3tsy_A 768 NAGARVLVVCSEITVV 783 (979)
T ss_dssp STTCEEEEEEEECTTT
T ss_pred CCCCEEEEEEEEecch
Confidence 9999999999998654
No 59
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=99.76 E-value=1e-17 Score=157.32 Aligned_cols=95 Identities=21% Similarity=0.197 Sum_probs=85.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCC-CCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHH
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~-~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~ 114 (339)
++.+|+.+|+++||+++|+++++||.|++++.+.. .....++..++..||++ .++.++++.+|+++..||..|+.+|+
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~~aC~~~~~al~~A~~~i~ 131 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLAQRCNGGMGAIELAGAYLG 131 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEcCccHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999987411 11235788999999997 68999999999999999999999999
Q ss_pred cCCCc--eEEEEccccccC
Q 019555 115 LGIND--IVVAGGMESMSN 131 (339)
Q Consensus 115 sG~~~--~vLv~g~e~~s~ 131 (339)
+|.++ +|||+|+|.++.
T Consensus 132 sg~~~~~~vLvvg~e~~s~ 150 (357)
T 3s3l_A 132 SGIGAGHAALLTTGDRFAG 150 (357)
T ss_dssp TTSSSSSEEEEEEEECCCT
T ss_pred cCCCCCCEEEEEEEecccc
Confidence 99999 999999999884
No 60
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=99.74 E-value=4.8e-18 Score=161.79 Aligned_cols=94 Identities=16% Similarity=0.171 Sum_probs=86.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
++.+..+|+.+|+++||++ +++++||.+++++.++....+..+..++..||++.+++.++++.+|+|+..||..|+.+
T Consensus 47 ~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~~ 124 (396)
T 1xpm_A 47 VNQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDY 124 (396)
T ss_dssp TTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHH
Confidence 4678999999999999998 78899999999988776666788999999999975689999999999999999999999
Q ss_pred HHcCCCceEEEEcccc
Q 019555 113 IQLGINDIVVAGGMES 128 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~ 128 (339)
|++|.+++|||+|+|.
T Consensus 125 I~sg~~~~vLvvg~e~ 140 (396)
T 1xpm_A 125 LATRPNEKVLVIATDT 140 (396)
T ss_dssp HTTCTTCEEEEEEEEE
T ss_pred HHcCCCCEEEEEeehh
Confidence 9999999999999996
No 61
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=99.74 E-value=1.9e-17 Score=158.17 Aligned_cols=96 Identities=14% Similarity=-0.024 Sum_probs=86.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc-eeeecccCccHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~-~~~v~~~cas~~~al~~A~~~I 113 (339)
.+..+|+.+|+++||+++|+++++||.+++++.++ ...+..+.+++..||++..++ .++++.+|+++..||..|+.+|
T Consensus 113 ~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i 191 (406)
T 2d3m_A 113 PGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCG-VDMPSADFQCAKLLGLHANVNKYCIYMQGAYAGGTVMRYAKDLA 191 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCCHHHHHHHHcCcCCCcceeeeEcCccHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998776 345678899999999975455 8999999999999999999999
Q ss_pred HcCCCceEEEEccccccC
Q 019555 114 QLGINDIVVAGGMESMSN 131 (339)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~ 131 (339)
++|.+++|||+|+|.++.
T Consensus 192 ~~g~~~~vLvvg~E~~s~ 209 (406)
T 2d3m_A 192 ENNRGARVLVVCAELTIM 209 (406)
T ss_dssp HTSTTCEEEEEEEECGGG
T ss_pred HcCCCCEEEEEEEEecch
Confidence 999999999999998875
No 62
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=99.73 E-value=7.3e-18 Score=159.78 Aligned_cols=97 Identities=16% Similarity=0.112 Sum_probs=89.9
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
++++..+|+.+|+++||++++ +++||.+++++.++....+..+..++..||+++.++.+++..+|+++..||..|..+
T Consensus 52 ~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~ 129 (388)
T 3v4n_A 52 ISQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKNH 129 (388)
T ss_dssp TTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHHH
Confidence 468999999999999999997 899999999998887667788999999999985589999999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|.++.|||+|+|.++.
T Consensus 130 i~sg~~~~vLVvg~e~~s~ 148 (388)
T 3v4n_A 130 VALHPDKKVLVVAADIAKY 148 (388)
T ss_dssp HHHCTTCEEEEEEEEEECC
T ss_pred HhcCCCCEEEEEEehhhcc
Confidence 9999999999999999875
No 63
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=99.73 E-value=3.1e-17 Score=155.92 Aligned_cols=95 Identities=16% Similarity=0.098 Sum_probs=87.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc-eeeecccCccHHHHHHHHHHHHH
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~-~~~v~~~cas~~~al~~A~~~I~ 114 (339)
+..+|+.+|+++||+++|+++++||.++++++++ ...+..+..++..||+++..+ .+++..+|+++..||..|+.+|+
T Consensus 101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~ 179 (393)
T 3ov2_A 101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-IDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAE 179 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999887 556788999999999985443 89999999999999999999999
Q ss_pred cCCCceEEEEccccccC
Q 019555 115 LGINDIVVAGGMESMSN 131 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (339)
+|.+++|||+|+|.+|.
T Consensus 180 sg~~~~vLvvg~E~~s~ 196 (393)
T 3ov2_A 180 NNRGARVLVVACEITVL 196 (393)
T ss_dssp HSTTCEEEEEEEECGGG
T ss_pred cCCCCEEEEEEEeccch
Confidence 99999999999999873
No 64
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=99.73 E-value=2e-17 Score=156.57 Aligned_cols=95 Identities=15% Similarity=0.106 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee-cccCccHHHHHHHHHHHHH
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v-~~~cas~~~al~~A~~~I~ 114 (339)
+..+|+.+|+++||+++|+++++||.+++++++ +...+..+..++..||+++....+++ ..+|+++..||..|..+|+
T Consensus 80 ~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t-~~~~p~~a~~v~~~LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 158 (379)
T 3euo_A 80 DGVPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGASGGLAALRTAANLCL 158 (379)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecC-CCCCCCHHHHHHHHcCCCCCeeEEEeeCchhhHHHHHHHHHHHHHH
Confidence 457999999999999999999999999999887 45577889999999999854448999 7999999999999999999
Q ss_pred c----CCCceEEEEccccccC
Q 019555 115 L----GINDIVVAGGMESMSN 131 (339)
Q Consensus 115 s----G~~~~vLv~g~e~~s~ 131 (339)
+ |.+++|||+|+|.+|.
T Consensus 159 a~~~~G~~~~vLvv~~E~~s~ 179 (379)
T 3euo_A 159 GHTARGKPARILVLALEVSTT 179 (379)
T ss_dssp HHHHTTCCCEEEEEEEECCGG
T ss_pred hccccCCCCEEEEEEEEeehh
Confidence 8 9999999999999875
No 65
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=99.73 E-value=9.8e-18 Score=160.29 Aligned_cols=97 Identities=12% Similarity=0.018 Sum_probs=88.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~ 112 (339)
++++..+|+.+|+++||+++| +++||.|++++.++....+..+..++..||+++.++.+++..+|+++..||..|..+
T Consensus 81 ~~e~~~~La~~Aa~~aL~~ag--~~dId~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~ 158 (425)
T 3sqz_A 81 ITDDVVTLAAGSANEILTAED--KEKIDMVILATESSVDQSKAGAVYVHSLLGIQPFARSFEMKEAAYSATAALNYAKLH 158 (425)
T ss_dssp TTSCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSCCSCSSSCHHHHHHHHTTCCSSCEEEEECCC-CHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhCC--hhhCCEEEEEecccccccchHHHHHHHHhCCCCCeeEEEEcCHhHHHHHHHHHHHHH
Confidence 467899999999999999998 899999999988887667788999999999985589999999999999999999999
Q ss_pred HHcCCCceEEEEccccccC
Q 019555 113 IQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~ 131 (339)
|++|.++.|||+|+|.++.
T Consensus 159 i~sg~~~~vLVvgae~~s~ 177 (425)
T 3sqz_A 159 VEKHPDTRVLVLASDIAKY 177 (425)
T ss_dssp HHHSTTCEEEEEEEEEECC
T ss_pred HHcCCCCeEEEEEEehhcc
Confidence 9999999999999999875
No 66
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=99.72 E-value=2.2e-17 Score=156.58 Aligned_cols=95 Identities=14% Similarity=-0.003 Sum_probs=86.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc-eeeecccCccHHHHHHHHHHHHH
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~-~~~v~~~cas~~~al~~A~~~I~ 114 (339)
+..+|+.+|+++||+++|+++++||.++++++++ ...+..+..++..||+++..+ .+++..+|+++..||..|..+|+
T Consensus 95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~ 173 (387)
T 3oit_A 95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAE 173 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCcccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999998877 446788999999999985443 89999999999999999999999
Q ss_pred cCCCceEEEEccccccC
Q 019555 115 LGINDIVVAGGMESMSN 131 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (339)
+|.+++|||+|+|.+|.
T Consensus 174 sg~~~~vLvvg~E~~s~ 190 (387)
T 3oit_A 174 NSRGARVLVVAAELTLM 190 (387)
T ss_dssp SSTTCEEEEEEEECGGG
T ss_pred cCCCCEEEEEEEeccch
Confidence 99999999999999973
No 67
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.72 E-value=3e-17 Score=185.50 Aligned_cols=189 Identities=20% Similarity=0.201 Sum_probs=150.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCccC----eEEEEeecCCC-------------------CCCcHHHHHHHHcCCCCCcceee
Q 019555 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-------------------LGQAPARQAALGAGIPNSVVCTT 94 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id----~i~~g~~~~~~-------------------~~~~~~~~ia~~lgl~~~~~~~~ 94 (339)
..|+.+++.+||+|||++++.++ ++++|....++ .....+.+|+..+|+ ++|+++
T Consensus 79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~t 156 (2512)
T 2vz8_A 79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSIT 156 (2512)
T ss_dssp HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCcee
Confidence 46899999999999999987665 58888764431 011377899999999 579999
Q ss_pred ecccCccHHHHHHHHHHHHHcCCCceEEEEccccccCCcchhhhhhccCCCCCccccccccccccccccCCCcHHHHHHH
Q 019555 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174 (339)
Q Consensus 95 v~~~cas~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 174 (339)
++++|+|++.||+.|++.|++|++|.+|++|++.+.. |.... +. .+
T Consensus 157 v~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~-p~~~~-------------------------------~~-~~- 202 (2512)
T 2vz8_A 157 IDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLK-PNSSL-------------------------------QF-MK- 202 (2512)
T ss_dssp EECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCC-HHHHH-------------------------------HH-HH-
T ss_pred eccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccC-HHHHH-------------------------------HH-cc-
Confidence 9999999999999999999999999999999998765 32221 00 00
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHhCCCccccceeeeecCCCCCcceEeecCCCCcccCHHHHhcCCCCCCCCCccc
Q 019555 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254 (339)
Q Consensus 175 ~~~~~g~~~~~~~~~~~~~~~~a~~n~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~g~l~ 254 (339)
. ..++++..||+||.+ .+|++
T Consensus 203 ----------------------------~--------------------~~ls~~g~c~~Fd~~----------adG~~- 223 (2512)
T 2vz8_A 203 ----------------------------L--------------------GMLSQDGTCRSFDAE----------GTGYC- 223 (2512)
T ss_dssp ----------------------------T--------------------TCBCTTCSCCSSSTT----------CCCBC-
T ss_pred ----------------------------C--------------------CCCCCCCCCCCCCCC----------CCCcc-
Confidence 0 125677889998877 78999
Q ss_pred cccCCcccccceeEEEeCHHHHHhcCCCccEEEEeeEEeeeCCCc--c----ccchHHHHHHHHHHcCCCCCCCcEEEee
Q 019555 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW--F----TTAPSLAIPKAIANAGLEASQIDYYEIN 328 (339)
Q Consensus 255 ~~~~~~~~DGAaAviL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~--~----~~~~~~a~~~al~~agl~~~DId~~~~h 328 (339)
+|||++++||.+.+.|+ ++++.|.|++.+.+.... + +.+..++++++|++||++++||||+|.|
T Consensus 224 ------~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaH 293 (2512)
T 2vz8_A 224 ------RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAH 293 (2512)
T ss_dssp ------BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECC
T ss_pred ------eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEee
Confidence 79999999999988775 478999999999886321 1 1234689999999999999999999999
Q ss_pred ccc
Q 019555 329 EAF 331 (339)
Q Consensus 329 d~F 331 (339)
-.=
T Consensus 294 GTg 296 (2512)
T 2vz8_A 294 GTG 296 (2512)
T ss_dssp CCC
T ss_pred cCC
Confidence 743
No 68
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=99.72 E-value=3.6e-17 Score=156.95 Aligned_cols=112 Identities=13% Similarity=0.025 Sum_probs=95.9
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCC--CCCccee
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGI--PNSVVCT 93 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl--~~~~~~~ 93 (339)
+..|.+++.+... .++.+..+|+.+|+++||+++|+++++||.|++++.++....+..+..++..||+ ..+++++
T Consensus 36 ~~~Gig~r~~~va---~~~E~~~~La~~Aa~~AL~~agi~~~dId~IivaT~t~~~~~ps~A~~v~~~LGl~g~~~~~a~ 112 (460)
T 2v4w_A 36 YTVGLGQTRMGFC---SVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGI 112 (460)
T ss_dssp CCCCCCCCEEECC---CTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCC
T ss_pred eeeeeeeEEEEEC---CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCCCCCCcEEE
Confidence 3456665553222 1357899999999999999999999999999999988877677889999999999 3367899
Q ss_pred eecccCccHHHHHHHHHHHHHcCCC--ceEEEEcccccc
Q 019555 94 TINKVCSSGMKAVMLAAQSIQLGIN--DIVVAGGMESMS 130 (339)
Q Consensus 94 ~v~~~cas~~~al~~A~~~I~sG~~--~~vLv~g~e~~s 130 (339)
++..+|+++..||..|..+|++|.+ +.|||+|+|.++
T Consensus 113 Dv~~ACsGg~~AL~~A~~~I~sg~~~~~~aLVVgaE~~s 151 (460)
T 2v4w_A 113 DTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAV 151 (460)
T ss_dssp EEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEEC
T ss_pred EecchhHHHHHHHHHHHHHHHhCCccCCEEEEEeccccc
Confidence 9999999999999999999999985 999999999876
No 69
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=99.71 E-value=2.8e-17 Score=156.63 Aligned_cols=109 Identities=16% Similarity=0.093 Sum_probs=94.6
Q ss_pred ccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee-cccC
Q 019555 21 ARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVC 99 (339)
Q Consensus 21 ~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v-~~~c 99 (339)
.+|+++.+...+. .+..+|+.+|+++||+++|+++++||.++++++++. ..+..+..++..||+++.++.+.+ ..+|
T Consensus 122 ~rtgi~~R~~~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~-~~P~~a~~v~~~LGl~~~~~~~~v~~~~C 199 (413)
T 3v7i_A 122 ASQTVQERTAPAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTTP-ALPGLDVALANRLPLRGDTMLLPATQWAC 199 (413)
T ss_dssp CCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSC-CSSCHHHHHHHHTTCCTTCEEEEESSCGG
T ss_pred cCCCHHHhCcccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCC-CcCHHHHHHHHHhCCCCCceEEEeeCCcc
Confidence 3566655433222 368899999999999999999999999999988874 567889999999999866788999 8999
Q ss_pred ccHHHHHHHHHHHHHcCCCceEEEEccccccC
Q 019555 100 SSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 100 as~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
+++..||..|+.+|++|.+++|||+|+|.+|.
T Consensus 200 agg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~ 231 (413)
T 3v7i_A 200 VAGTRSLALAADLVAADPDRVVLVVISEALST 231 (413)
T ss_dssp GHHHHHHHHHHHHHHHCTTCEEEEEEEECGGG
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEEEecccc
Confidence 99999999999999999999999999999985
No 70
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=99.71 E-value=6.2e-17 Score=156.31 Aligned_cols=93 Identities=16% Similarity=0.144 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee-cccCccHHHHHHHHHHHHHc-
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSIQL- 115 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v-~~~cas~~~al~~A~~~I~s- 115 (339)
.+|+.+|+++||+++|+++++||.|++++++ +...+..+..++..||+++....+++ ..+|+++..||..|..+|++
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~ 189 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGH 189 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcc
Confidence 5999999999999999999999999999877 45577889999999999854448999 79999999999999999997
Q ss_pred ---CCCceEEEEccccccC
Q 019555 116 ---GINDIVVAGGMESMSN 131 (339)
Q Consensus 116 ---G~~~~vLv~g~e~~s~ 131 (339)
|.+++|||+|+|.+|.
T Consensus 190 ~~~G~~~~vLVvg~E~~S~ 208 (465)
T 3e1h_A 190 TARGKPARILVLALEVSTT 208 (465)
T ss_dssp HHTTCCCEEEEEEEECCGG
T ss_pred cccCCCCEEEEEEEeecch
Confidence 9999999999999875
No 71
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=99.70 E-value=1.4e-16 Score=151.42 Aligned_cols=96 Identities=15% Similarity=0.005 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc-eeeecccCccHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~-~~~v~~~cas~~~al~~A~~~I 113 (339)
.+..+|+.+|+++||+++|+++++||.+++++.++ ...+..+..++..||++..++ .++++.+|+++..||..|+.+|
T Consensus 100 ~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~~~~~al~~A~~~i 178 (389)
T 1i88_A 100 VEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG-VDMPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLA 178 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCC-CCCchHHHHHHHHcCcCCCchhheeECCccHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998876 345678899999999975455 8999999999999999999999
Q ss_pred HcCCCceEEEEccccccC
Q 019555 114 QLGINDIVVAGGMESMSN 131 (339)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~ 131 (339)
++|.+++|||+|+|.++.
T Consensus 179 ~~g~~~~vLvvg~E~~s~ 196 (389)
T 1i88_A 179 ENNKGARVLVVCSEVTAV 196 (389)
T ss_dssp HTSTTCEEEEEEEECGGG
T ss_pred HcCCCCEEEEEEEecccH
Confidence 999999999999999875
No 72
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=99.70 E-value=1.7e-16 Score=153.43 Aligned_cols=98 Identities=9% Similarity=0.028 Sum_probs=89.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCC--CCCcceeeecccCccHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGI--PNSVVCTTINKVCSSGMKAVMLAA 110 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl--~~~~~~~~v~~~cas~~~al~~A~ 110 (339)
++.++.+|+.+|+++||+++|+++++||.+++++.++....+..+..++..||+ ++.++.++++.+|+++..||..|.
T Consensus 48 ~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~ 127 (450)
T 2f82_A 48 ELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCV 127 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHH
Confidence 457999999999999999999999999999999888766678889999999998 346899999999999999999999
Q ss_pred HHHHcCCC--ceEEEEcccccc
Q 019555 111 QSIQLGIN--DIVVAGGMESMS 130 (339)
Q Consensus 111 ~~I~sG~~--~~vLv~g~e~~s 130 (339)
.+|++|.+ ++|||+|+|.++
T Consensus 128 ~~I~sg~~~~~~vLVvg~e~~~ 149 (450)
T 2f82_A 128 NWVESNSWDGRYGLVICTDSAV 149 (450)
T ss_dssp HHHHSTTCCSCEEEEEEEEEEC
T ss_pred HHHHcCCCcCCeEEEEEeeecc
Confidence 99999997 999999999764
No 73
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=99.70 E-value=1.4e-16 Score=151.35 Aligned_cols=96 Identities=15% Similarity=0.007 Sum_probs=86.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc-eeeecccCccHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~-~~~v~~~cas~~~al~~A~~~I 113 (339)
.+..+|+.+|+++||+++|+++++||.+++++.++ ...+..+..++..||++..++ .++++.+|+++..||..|+.+|
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i 174 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAG-VDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIA 174 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999998775 345678899999999975443 8999999999999999999999
Q ss_pred HcCCCceEEEEccccccC
Q 019555 114 QLGINDIVVAGGMESMSN 131 (339)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~ 131 (339)
++|.+++|||+|+|.++.
T Consensus 175 ~~g~~~~vLvvg~e~~s~ 192 (387)
T 3a5r_A 175 ENNKGARVLIVCSEMTTT 192 (387)
T ss_dssp HHSTTCEEEEEEEECCTT
T ss_pred HhCCCCEEEEEEEeccch
Confidence 999999999999999875
No 74
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=99.69 E-value=1.3e-16 Score=152.24 Aligned_cols=96 Identities=15% Similarity=0.052 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc-eeeecccCccHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~-~~~v~~~cas~~~al~~A~~~I 113 (339)
.+..+|+.+|+++||+++|+++++||.++++++++ ...+..+..++..||++..++ .++++.+|+++..||..|+.+|
T Consensus 113 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i 191 (402)
T 3awk_A 113 LEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSG-VDMPGADFQLAKLLGLRPTVKRVMLYQQGAYAGATVLRVAKDLA 191 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CcCChHHHHHHHHcCCCCccceeeEECCccHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999998876 456778899999999975455 8999999999999999999999
Q ss_pred HcCCCceEEEEccccccC
Q 019555 114 QLGINDIVVAGGMESMSN 131 (339)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~ 131 (339)
++|.+++|||+|+|.++.
T Consensus 192 ~sg~~~~vLvvg~E~~s~ 209 (402)
T 3awk_A 192 ENNKGARVLVACSEVTAV 209 (402)
T ss_dssp HTSTTCEEEEEEEECTTT
T ss_pred HcCCCCEEEEEEEeccch
Confidence 999999999999999875
No 75
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=99.68 E-value=2.6e-16 Score=150.60 Aligned_cols=96 Identities=14% Similarity=0.012 Sum_probs=87.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc-eeeecccCccHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~-~~~v~~~cas~~~al~~A~~~I 113 (339)
.+..+|+.+|+++||+++|+++++||.+++++.++ ...+..+..++..||++..++ .++++.+|+|+..||..|..+|
T Consensus 118 ~~~~~La~~Aa~~aL~~agl~~~dId~li~~t~~~-~~~p~~a~~v~~~LGl~~~~~~~~~v~~aCas~~~AL~~A~~~i 196 (413)
T 2p0u_A 118 AQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSG-VNMPGAELATAKLLGLRPNVRRVMMYQQGAFAGATVLRVAKDLA 196 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcCHHHCCEEEEEecCC-cccCcHHHHHHHHhCCCCCcceEeEECCccHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998876 446678899999999975455 8999999999999999999999
Q ss_pred HcCCCceEEEEccccccC
Q 019555 114 QLGINDIVVAGGMESMSN 131 (339)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~ 131 (339)
++|.+++|||+|+|.++.
T Consensus 197 ~sg~~~~vLvvg~E~~s~ 214 (413)
T 2p0u_A 197 ENNAGARVLAICSEVTAV 214 (413)
T ss_dssp HHSTTCEEEEEEEECSTT
T ss_pred HhCCCCEEEEEEEhhcch
Confidence 999999999999999875
No 76
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=99.68 E-value=2.1e-16 Score=150.80 Aligned_cols=96 Identities=15% Similarity=0.032 Sum_probs=86.2
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc-eeeecccCccHHHHHHHHHHHH
Q 019555 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (339)
Q Consensus 35 ~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~-~~~v~~~cas~~~al~~A~~~I 113 (339)
.+..+|+.+|+++||+++|+++++||.+++++.++ ...+..+..++..||++..++ .++++.+|+++..||..|+.+|
T Consensus 105 ~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCss~~~al~~A~~~i 183 (402)
T 1ee0_A 105 TGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAG-VDMPGADYQLVKLLGLSPSVKRYMLYQQGAAAGGTVLRLAKDLA 183 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSC-CEESCHHHHHHHHHTCCTTCEEEEECSCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCChHHHHHHHHcCcCCCcceeeEECchhHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998765 235667899999999975453 8999999999999999999999
Q ss_pred HcCCCceEEEEccccccC
Q 019555 114 QLGINDIVVAGGMESMSN 131 (339)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~ 131 (339)
++|.+++|||+|+|.++.
T Consensus 184 ~~g~~~~vLvvg~E~~s~ 201 (402)
T 1ee0_A 184 ENNKGSRVLIVCSEITAI 201 (402)
T ss_dssp HHSTTCCEEEEEEECGGG
T ss_pred HcCCCCEEEEEEEeccch
Confidence 999999999999998875
No 77
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=99.67 E-value=2.5e-16 Score=145.86 Aligned_cols=94 Identities=16% Similarity=0.127 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHHHHHHHcC
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLG 116 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A~~~I~sG 116 (339)
..+|+.+|+++||+++|+++++||.+++++.+++...+..+..++..||+++ ++.++++.+|+++..||..|+.+|++|
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~-~~~~~v~~aC~s~~~al~~A~~~i~~g 130 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATE-AFAFDISAACSGFVYALSMAEKLVLSG 130 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTT-CEEEEECCGGGHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCC-ceEEEeCcccHHHHHHHHHHHHHHHCC
Confidence 8999999999999999999999999999998877667788999999999984 899999999999999999999999999
Q ss_pred CCceEEEEccccccC
Q 019555 117 INDIVVAGGMESMSN 131 (339)
Q Consensus 117 ~~~~vLv~g~e~~s~ 131 (339)
.+++|||+|+|.+|.
T Consensus 131 ~~~~vLvvg~e~~s~ 145 (321)
T 3il6_A 131 RYQTGLVIGGETFSK 145 (321)
T ss_dssp SCCCEEEEEEECGGG
T ss_pred CCCEEEEEEEccccc
Confidence 999999999999875
No 78
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=99.67 E-value=6.5e-16 Score=147.80 Aligned_cols=95 Identities=15% Similarity=0.072 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc-eeeecccCccHHHHHHHHHHHHH
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~-~~~v~~~cas~~~al~~A~~~I~ 114 (339)
+..+|+.+|+++||+++|+++++||.+++++.++ ...+..+..++..||++..++ .+++..+|+++..||..|+.+|+
T Consensus 124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~ 202 (413)
T 1xes_A 124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTT-PDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAE 202 (413)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCC-CEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999998876 335677889999999975453 89999999999999999999999
Q ss_pred cCCCceEEEEccccccC
Q 019555 115 LGINDIVVAGGMESMSN 131 (339)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (339)
+|.+++|||+|+|.++.
T Consensus 203 ~G~~~~vLvvg~E~~s~ 219 (413)
T 1xes_A 203 NNRGARVLVICSETTAV 219 (413)
T ss_dssp TSTTCCEEEEEEECTTT
T ss_pred cCCCCEEEEEEehhhhh
Confidence 99999999999999875
No 79
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=99.61 E-value=5.6e-15 Score=143.49 Aligned_cols=111 Identities=13% Similarity=0.119 Sum_probs=93.3
Q ss_pred ceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHH---cCCCCCc
Q 019555 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALG---AGIPNSV 90 (339)
Q Consensus 14 ~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~---lgl~~~~ 90 (339)
..++.|.|.+.+.... ++.+..+|+.+|+++||+++|+++++||.+++++.++....+..+..++.. +|++ ++
T Consensus 53 ~~~~~~~Gi~~r~~~~---~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~-~~ 128 (478)
T 2p8u_A 53 GKYTIGLGQAKMGFCT---DREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNT-DI 128 (478)
T ss_dssp TCCCCCCCCCEEECCC---TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCC-CC
T ss_pred hHhecccCceEEEeCC---CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCC-Cc
Confidence 3445666666554332 357899999999999999999999999999999888776667788888844 4555 68
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCC--CceEEEEcccc
Q 019555 91 VCTTINKVCSSGMKAVMLAAQSIQLGI--NDIVVAGGMES 128 (339)
Q Consensus 91 ~~~~v~~~cas~~~al~~A~~~I~sG~--~~~vLv~g~e~ 128 (339)
+.+++..+|+++..||..|..+|++|. ++.|||+|+|.
T Consensus 129 ~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei 168 (478)
T 2p8u_A 129 EGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI 168 (478)
T ss_dssp BCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred eEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence 999999999999999999999999999 99999999994
No 80
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=99.50 E-value=3.8e-14 Score=137.35 Aligned_cols=92 Identities=12% Similarity=-0.009 Sum_probs=82.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCC--CCcceeeecccCccHHHHHHHHH
Q 019555 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP--NSVVCTTINKVCSSGMKAVMLAA 110 (339)
Q Consensus 33 ~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~--~~~~~~~v~~~cas~~~al~~A~ 110 (339)
++++..+|+++|+++||+++|++|++||.|++++.++....+..+..++..||+. .++.++++..+|+++..||..|.
T Consensus 50 ~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~ 129 (460)
T 2wya_A 50 VQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAA 129 (460)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHH
Confidence 4689999999999999999999999999999999998877888899999888652 35678999999999999999999
Q ss_pred HHHHcCCCceEEEE
Q 019555 111 QSIQLGINDIVVAG 124 (339)
Q Consensus 111 ~~I~sG~~~~vLv~ 124 (339)
.+|++|.++.++++
T Consensus 130 ~~i~~g~~~~~lvv 143 (460)
T 2wya_A 130 NWMESSSWDGRYAM 143 (460)
T ss_dssp HHHTSTTCCSCEEE
T ss_pred HHHHhccccceEEE
Confidence 99999988766554
No 81
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=94.13 E-value=0.098 Score=47.88 Aligned_cols=91 Identities=13% Similarity=0.137 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCccee-------e----e---cccCccHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT-------T----I---NKVCSSGMK 104 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~-------~----v---~~~cas~~~ 104 (339)
-.+.++++++|+|+|++++++|.|+.|.... .+..+...+..++|++.+..-. + + .+||+.+..
T Consensus 207 PaA~~ti~~~l~d~g~~~~d~D~ivtgdL~q--~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~ 284 (347)
T 3lma_A 207 PAAADTIKQHLEDLGRTPDDYDLILTGDLSG--VGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAV 284 (347)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEESCHH--HHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHcCEEecCChHH--HHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHH
Confidence 3455677999999999999999999753211 1345667788888886422111 1 1 134544443
Q ss_pred HH-HHHHHHHHcCCCceEEEEccccccC
Q 019555 105 AV-MLAAQSIQLGINDIVVAGGMESMSN 131 (339)
Q Consensus 105 al-~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (339)
.+ ..-...++.|+.+.||++++-.+-+
T Consensus 285 v~~~~~~~~~~~g~~~ril~~~tGalls 312 (347)
T 3lma_A 285 VTFAHIFKEIEAGRLNRVLVVATGALLS 312 (347)
T ss_dssp HHHHTHHHHHHTTSCSEEEEEEEEECCC
T ss_pred HHHHHHHHHHhcCcccEEEEEecccccC
Confidence 33 4556789999999999998876655
No 82
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=92.03 E-value=0.41 Score=44.20 Aligned_cols=83 Identities=11% Similarity=-0.052 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHH-HHHHHcCC
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLA-AQSIQLGI 117 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A-~~~I~sG~ 117 (339)
+...++++++|+++|+++++||.++.-. .+..+-..++..||++++....++..-++++...+-.+ ..++++|.
T Consensus 266 ~~~~~~i~~~L~~~gl~~~did~~v~Hq-----~n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~~~~~~g~ 340 (365)
T 3gwa_A 266 AEVPRAADRLLALAGEPRENIDCFVLHQ-----ANRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALETMRANGT 340 (365)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC-----CCHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHHHHHHcCC
Confidence 4556788999999999999999987522 23456678889999986443344443333332222222 33455554
Q ss_pred C---ceEEEEcc
Q 019555 118 N---DIVVAGGM 126 (339)
Q Consensus 118 ~---~~vLv~g~ 126 (339)
. |.+|++|+
T Consensus 341 ~~~Gd~vll~~f 352 (365)
T 3gwa_A 341 LARGMRLMLLGF 352 (365)
T ss_dssp CCTTCEEEEEEE
T ss_pred CCCCCEEEEEEE
Confidence 3 57777654
No 83
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=91.09 E-value=0.48 Score=43.02 Aligned_cols=80 Identities=15% Similarity=0.119 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecc----cCccHHHHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK----VCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~----~cas~~~al~~A~~~I~ 114 (339)
+...++++++|+++|+++++||.++.=. .+..+...+...||++++....++.. +++|-..+|.. +++
T Consensus 234 ~~~~~~i~~~l~~~gl~~~did~~~~Hq-----~~~~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~~---~~~ 305 (333)
T 4dfe_A 234 NVLEKVAVEALEKANLSAEQIDWLIPHQ-----ANIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDV---AVR 305 (333)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECC-----SCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHHH---HHH
Confidence 5567788999999999999999887521 13456678889999985433333332 22222333333 344
Q ss_pred cCCC---ceEEEEcc
Q 019555 115 LGIN---DIVVAGGM 126 (339)
Q Consensus 115 sG~~---~~vLv~g~ 126 (339)
+|+. |.+|++++
T Consensus 306 ~g~~~~Gd~vll~~~ 320 (333)
T 4dfe_A 306 DGRIKRGQNVLIEGV 320 (333)
T ss_dssp TTCSCTTCEEEEEEE
T ss_pred cCCCCCCCEEEEEEE
Confidence 5433 56776654
No 84
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=90.93 E-value=0.51 Score=42.70 Aligned_cols=81 Identities=17% Similarity=0.099 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec----ccCccHHHHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN----KVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~----~~cas~~~al~~A~~~I~ 114 (339)
+...++++++|+++|+++++||.++.-. .+......+...||++++....++. ..++|...+|.. .++
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H~-----~~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~---~~~ 295 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPHQ-----ANTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAH---GLR 295 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC-----CCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHH---HHH
Confidence 4567889999999999999999987621 2334456688889986432222222 233344444443 345
Q ss_pred cCCC---ceEEEEccc
Q 019555 115 LGIN---DIVVAGGME 127 (339)
Q Consensus 115 sG~~---~~vLv~g~e 127 (339)
.|+. +.+|+.++.
T Consensus 296 ~~~~~~G~~vll~~~G 311 (331)
T 2x3e_A 296 QGILRDGGNMVLTGFG 311 (331)
T ss_dssp TTCSCTTCEEEEEEEE
T ss_pred hCCCCCCCEEEEEEEe
Confidence 5533 577776654
No 85
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=90.85 E-value=0.49 Score=43.21 Aligned_cols=82 Identities=13% Similarity=0.045 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec----ccCccHHHHHHHHHHH--
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN----KVCSSGMKAVMLAAQS-- 112 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~----~~cas~~~al~~A~~~-- 112 (339)
+...++++++|+++|+++++||.++.=. .+..+-..+...||++++....++. .+++|-..+|..+.+.
T Consensus 246 ~~~~~~i~~~l~~~gl~~~did~~v~Hq-----~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~ 320 (345)
T 3s21_A 246 KLAQKTFVAAKQVLGWAVEELDQFVIHQ-----VSRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGR 320 (345)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCSEEEECC-----SCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeCC-----CCHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHHHcCC
Confidence 3455777899999999999999988521 2345567788999998543323332 2333444455554443
Q ss_pred HHcCCCceEEEEccc
Q 019555 113 IQLGINDIVVAGGME 127 (339)
Q Consensus 113 I~sG~~~~vLv~g~e 127 (339)
++.| |.+|++|+.
T Consensus 321 ~~~G--d~vll~~~G 333 (345)
T 3s21_A 321 LKKG--DRIALLGIG 333 (345)
T ss_dssp CCTT--CEEEEEEEE
T ss_pred CCCC--CEEEEEEEC
Confidence 4444 677776654
No 86
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=90.60 E-value=0.55 Score=42.52 Aligned_cols=80 Identities=16% Similarity=0.015 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecc--cCc--cHHHHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK--VCS--SGMKAVMLAAQSIQ 114 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~--~ca--s~~~al~~A~~~I~ 114 (339)
+...++++++|+++|+++++||.++.=. .+..+...+...||++++....++.. .|+ |-..+|.. +++
T Consensus 224 ~~~~~~i~~~l~~~gl~~~did~~v~Hq-----~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~---~~~ 295 (323)
T 3il3_A 224 RELSNVVEETLLANNLDKKDLDWLVPHQ-----ANLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDE---AIR 295 (323)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCCEEEECC-----SCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHcCcCHHHhhccHhhcCchHHHHHHHHHHH---HHH
Confidence 3456778899999999999999887522 13456678889999985433334432 222 22333333 344
Q ss_pred cCCC---ceEEEEcc
Q 019555 115 LGIN---DIVVAGGM 126 (339)
Q Consensus 115 sG~~---~~vLv~g~ 126 (339)
+|+. |.+|++|+
T Consensus 296 ~g~~~~Gd~vll~~~ 310 (323)
T 3il3_A 296 DGRIQRGQLLLLEAF 310 (323)
T ss_dssp TTSSCTTCEEEEEEE
T ss_pred cCCCCCCCEEEEEEE
Confidence 4433 56776654
No 87
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=90.26 E-value=0.42 Score=44.01 Aligned_cols=81 Identities=14% Similarity=0.023 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec----ccCccHHHHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN----KVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~----~~cas~~~al~~A~~~I~ 114 (339)
+...++++++|+++|+++++||.++.-. .+..+...++..||++++.-..++. .+++|-..+|..+.+.++
T Consensus 254 ~~~~~~i~~~L~~~gl~~~did~~v~Hq-----~n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~l~ 328 (359)
T 3h78_A 254 QTLVRIAGEMLAAHELTLDDIDHVICHQ-----PNLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPDIQ 328 (359)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECC-----SCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHhCC
Confidence 4456788999999999999999987522 1345567888999998543333332 334444555665555455
Q ss_pred cCCCceEEEEcc
Q 019555 115 LGINDIVVAGGM 126 (339)
Q Consensus 115 sG~~~~vLv~g~ 126 (339)
.| |.+|++|+
T Consensus 329 ~G--d~vll~~f 338 (359)
T 3h78_A 329 PG--QRVLVLTY 338 (359)
T ss_dssp TT--CEEEEEEE
T ss_pred CC--CEEEEEEE
Confidence 66 56666554
No 88
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=90.19 E-value=0.65 Score=41.63 Aligned_cols=80 Identities=15% Similarity=0.042 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee----cccCccHHHHHHHHHHHHHc
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI----NKVCSSGMKAVMLAAQSIQL 115 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v----~~~cas~~~al~~A~~~I~s 115 (339)
-..++++++|+++|+++++||.++.-. .+......+...+|++........ +..+++...+|..+ +++
T Consensus 219 ~~~~~i~~aL~~agl~~~did~v~~H~-----~~~~~~d~i~~~lg~~~~~~~~~~~~~Gn~~~As~~~~L~~~---~~~ 290 (317)
T 1hnj_A 219 ELAHIVDETLAANNLDRSQLDWLVPHQ-----ANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEA---VRD 290 (317)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEECC-----SCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHcCCCHHHhHhhHhhhCcHHHHHHHHHHHHH---HHh
Confidence 456889999999999999999887521 133445678888998642211112 23344444444443 444
Q ss_pred CCC---ceEEEEccc
Q 019555 116 GIN---DIVVAGGME 127 (339)
Q Consensus 116 G~~---~~vLv~g~e 127 (339)
|.. +.+|++++.
T Consensus 291 ~~~~~G~~vll~~~G 305 (317)
T 1hnj_A 291 GRIKPGQLVLLEAFG 305 (317)
T ss_dssp TCSCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEEEEc
Confidence 433 677776654
No 89
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=89.37 E-value=0.84 Score=40.76 Aligned_cols=80 Identities=15% Similarity=0.085 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee----cccCccHHHHHHHHHHHHHc
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI----NKVCSSGMKAVMLAAQSIQL 115 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v----~~~cas~~~al~~A~~~I~s 115 (339)
-..++++++|+++|+++++||.++.-. .+......+...+|++......+. +..+++...+|.. +++.
T Consensus 213 ~~~~~i~~al~~agl~~~did~~~~H~-----~~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~---~~~~ 284 (313)
T 1zow_A 213 IMGDASTRVVEKANLTSDDIDLFIPHQ-----ANIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQ---ELKN 284 (313)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEECC-----SCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHH---HHHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHH---HHHc
Confidence 567789999999999999999987521 123344567788898642222222 2334444444444 3455
Q ss_pred CCC---ceEEEEccc
Q 019555 116 GIN---DIVVAGGME 127 (339)
Q Consensus 116 G~~---~~vLv~g~e 127 (339)
|+. +.+|+.++-
T Consensus 285 ~~~~~g~~vl~~~~G 299 (313)
T 1zow_A 285 GKLKDDDTIVLVGFG 299 (313)
T ss_dssp TCCCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEEEEc
Confidence 543 677776554
No 90
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=89.26 E-value=0.83 Score=42.48 Aligned_cols=84 Identities=10% Similarity=-0.023 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCccee---eecccCccHHHHH-HHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT---TINKVCSSGMKAV-MLAAQSIQ 114 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~---~v~~~cas~~~al-~~A~~~I~ 114 (339)
+-..++++++|+++|+++++||.++.-. .+......+...||++++.... .+..-+.++...+ ..-..+++
T Consensus 287 ~~~~~~i~~aL~~agl~~~dId~~~~H~-----~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~ 361 (393)
T 1ted_A 287 SGVAPVVTEMLWDNGLQISDIDLWAIHP-----GGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQ 361 (393)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSCEEECC-----SCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEECC-----CcHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHh
Confidence 3456788999999999999999887621 2334556788889997543211 1222222222222 22234556
Q ss_pred cCCC----ceEEEEccc
Q 019555 115 LGIN----DIVVAGGME 127 (339)
Q Consensus 115 sG~~----~~vLv~g~e 127 (339)
.|+. +.+|++++-
T Consensus 362 ~g~~~~~Gd~vll~~~G 378 (393)
T 1ted_A 362 QAESAKAISTGVAFAFG 378 (393)
T ss_dssp SCSSSSSSEEEEEEEEE
T ss_pred cCccCCCCCeEEEEEec
Confidence 6654 678876654
No 91
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=88.94 E-value=1 Score=40.67 Aligned_cols=46 Identities=9% Similarity=-0.095 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCC
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS 89 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~ 89 (339)
+...++++++|+++|+++++||.++.-. .+......+...||++..
T Consensus 232 ~~~~~~i~~al~~agl~~~dId~~~~H~-----~~~~~~~~~~~~lg~~~~ 277 (335)
T 1u6e_A 232 FKMGDVGRRAMDAAGVRPDQIDVFVPHQ-----ANSRINELLVKNLQLRPD 277 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECC-----SCHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHcCCCch
Confidence 3567789999999999999999988522 133445567788999754
No 92
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=88.44 E-value=1.1 Score=40.63 Aligned_cols=81 Identities=15% Similarity=-0.018 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCC-cceeeec----ccCccHHHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS-VVCTTIN----KVCSSGMKAVMLAAQSI 113 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~-~~~~~v~----~~cas~~~al~~A~~~I 113 (339)
+-..++++++|+++|+++++||.++.-. .+......+...||++.. .....+. .+++|...+|..+ +
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~~H~-----~~~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~---~ 302 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFVPHQ-----ANLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRL---V 302 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEECC-----SCHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHH---H
Confidence 4567889999999999999999987521 133445578888999743 2211222 2334444444433 4
Q ss_pred HcCCC---ceEEEEccc
Q 019555 114 QLGIN---DIVVAGGME 127 (339)
Q Consensus 114 ~sG~~---~~vLv~g~e 127 (339)
+.|+. +.+|++++.
T Consensus 303 ~~g~~~~G~~vll~~~G 319 (339)
T 1mzj_A 303 RSGAVPGGGPALMIGFG 319 (339)
T ss_dssp HHTSSCTTCEEEEEEEE
T ss_pred HcCCCCCCCEEEEEEEc
Confidence 44433 577776654
No 93
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=87.35 E-value=1.4 Score=39.13 Aligned_cols=79 Identities=25% Similarity=0.159 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee----cccCccHHHHHHHHHHHHHc
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI----NKVCSSGMKAVMLAAQSIQL 115 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v----~~~cas~~~al~~A~~~I~s 115 (339)
...++++++|+++|+++++||.++.-. .+......+...+|++......+. +..++++..+|..+ +++
T Consensus 211 ~~~~~i~~al~~agl~~~did~~~~H~-----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~---~~~ 282 (309)
T 2ebd_A 211 SMEEVCREVLEKAGVKPEEVSLVIPHQ-----ANVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEA---IKE 282 (309)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEECC-----SCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHH---HHc
Confidence 567889999999999999999887522 122334567788998632211111 23445555555444 444
Q ss_pred CCC---ceEEEEcc
Q 019555 116 GIN---DIVVAGGM 126 (339)
Q Consensus 116 G~~---~~vLv~g~ 126 (339)
|+. +.+|+.++
T Consensus 283 g~~~~G~~~l~~~~ 296 (309)
T 2ebd_A 283 GKVKRGDLILMTAM 296 (309)
T ss_dssp TCCCTTCEEEEEEE
T ss_pred CCCCCCCEEEEEEE
Confidence 533 67777655
No 94
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=86.07 E-value=1.4 Score=40.38 Aligned_cols=82 Identities=15% Similarity=0.039 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec----ccCccHHHHHHHHH--HH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN----KVCSSGMKAVMLAA--QS 112 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~----~~cas~~~al~~A~--~~ 112 (339)
+...++++++|+++|+++++||.++.=. .+..+...++..||++++....++. .+++|-..+|..+. ..
T Consensus 244 ~~~~~~i~~~l~~~gl~~~did~~v~Hq-----~~~~i~~~~~~~Lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~ 318 (354)
T 4efi_A 244 NAVPKLVSRTLDIAGRDKDSYDAFLFHQ-----ANLFMLKHLAKKAGLPAERVPVNIGEYGNTSCASIPLLITTELKDRL 318 (354)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC-----CCHHHHHHHHHHTTCCGGGSCCCHHHHCBCGGGHHHHHHHHHSHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeCC-----CCHHHHHHHHHHhCcCHHHHHHHHhhhCcHHHHHHHHHHHHHHHhCC
Confidence 5566788999999999999999987522 2345667888999998543333332 33444444555543 24
Q ss_pred HHcCCCceEEEEccc
Q 019555 113 IQLGINDIVVAGGME 127 (339)
Q Consensus 113 I~sG~~~~vLv~g~e 127 (339)
++.| |.+|++|+-
T Consensus 319 ~~~G--d~vll~~fG 331 (354)
T 4efi_A 319 KEET--LQLGMFGFG 331 (354)
T ss_dssp HHSC--EEEEEEEEE
T ss_pred CCCC--CEEEEEEEc
Confidence 5666 567766553
No 95
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=85.43 E-value=2.2 Score=38.20 Aligned_cols=80 Identities=18% Similarity=0.109 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee----cccCccHHHHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI----NKVCSSGMKAVMLAAQSIQ 114 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v----~~~cas~~~al~~A~~~I~ 114 (339)
+-..++++++|+++|+++++||.++.-. .+......+...+|++......+. +..++++..+|.. +++
T Consensus 220 ~~~~~~i~~al~~agl~~~did~~~~H~-----~~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~~---~l~ 291 (322)
T 1ub7_A 220 RVMNTATLEAIEKAGLTPEDIRLFVPHQ-----ANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKE---AVD 291 (322)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC-----SCHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHHH---HHH
Confidence 4567889999999999999999887522 122344567788898642211111 1334444444443 455
Q ss_pred cCCC---ceEEEEcc
Q 019555 115 LGIN---DIVVAGGM 126 (339)
Q Consensus 115 sG~~---~~vLv~g~ 126 (339)
.|.. +.+|+.++
T Consensus 292 ~g~~~~g~~~l~~~~ 306 (322)
T 1ub7_A 292 AGRIREGDHVLLVSF 306 (322)
T ss_dssp HTSSCTTCEEEEEEE
T ss_pred hCCCCCCCEEEEEEE
Confidence 5533 57777654
No 96
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=85.20 E-value=1.6 Score=40.56 Aligned_cols=72 Identities=17% Similarity=0.033 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHH--HHcCCCCCcceeeecc--------cCccHHHHHHHHH
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAA--LGAGIPNSVVCTTINK--------VCSSGMKAVMLAA 110 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia--~~lgl~~~~~~~~v~~--------~cas~~~al~~A~ 110 (339)
...|+++||+++|++++|||.+-+. .......+. +.+|+.+ +.+.++. .++++...+..+.
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~-------D~f~~~~l~~~e~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~ 367 (395)
T 2ib8_A 297 PVYAASMVLKDVGLKKEDIAMWEVN-------EAFSLVVLANIKMLEIDP--QKVNINGGAVSLGHPIGMSGARIVGHLT 367 (395)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEC-------CSBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEc-------cccHHHHHHHHHHcCCCc--cccCCCcchhhcCCChhHHHHHHHHHHH
Confidence 5789999999999999999998843 222233343 3378742 1222221 2446667777888
Q ss_pred HHHHcCCCceE
Q 019555 111 QSIQLGINDIV 121 (339)
Q Consensus 111 ~~I~sG~~~~v 121 (339)
..++.|++..+
T Consensus 368 ~~L~~~~~gl~ 378 (395)
T 2ib8_A 368 HALKQGEYGLA 378 (395)
T ss_dssp HHSCTTCEEEE
T ss_pred HHHhhCCceEE
Confidence 88888766555
No 97
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=84.98 E-value=0.87 Score=41.84 Aligned_cols=82 Identities=15% Similarity=0.036 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee-c----ccCccHHHHHHHHHHH-
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-N----KVCSSGMKAVMLAAQS- 112 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v-~----~~cas~~~al~~A~~~- 112 (339)
+...++++++|+++|++++|||.+++-.... .. -..++.+||++.+.....+ + .+++|...+|..+.+.
T Consensus 238 ~~~~~~i~~~L~~~gl~~~did~~v~~hq~~----~~-~~~~~~~lgl~~ek~~~~~~~~~GNt~aAsipl~L~~~~~~g 312 (357)
T 3s3l_A 238 DLLVAAKTQALEDAGTAIEDIAHAVIPVSRR----GT-GHELHDLLGLPDERTSWAYGRTTGHVGAGDQYAGLAHLVENA 312 (357)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEECCSCCC----CS-SCCHHHHHTSCGGGBTHHHHHHHCBCTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCcCh----HH-HHHHHHHcCCCHHHhHHHhccccccchHhHHHHHHHHHHHcC
Confidence 3566788999999999999999998522211 12 2357788899754322222 1 1233444455554432
Q ss_pred -HHcCCCceEEEEccc
Q 019555 113 -IQLGINDIVVAGGME 127 (339)
Q Consensus 113 -I~sG~~~~vLv~g~e 127 (339)
++.| |.+|++|+-
T Consensus 313 ~l~~G--d~vll~~fG 326 (357)
T 3s3l_A 313 LVQPG--DRVLLFGGG 326 (357)
T ss_dssp CCCTT--CEEEEECCB
T ss_pred CCCCC--CEEEEEEEc
Confidence 3333 677877664
No 98
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=84.92 E-value=2.3 Score=36.44 Aligned_cols=68 Identities=12% Similarity=0.045 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHH
Q 019555 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLA 109 (339)
Q Consensus 37 ~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A 109 (339)
-.+....+++++|+++|+.+++||.|.++..-+.+++-.++-..+..|.+..+.|.+.+ +.+.++...
T Consensus 34 h~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRig~~~ak~la~~~~~Pl~~V-----~~l~a~a~~ 101 (231)
T 2gel_A 34 HTQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGV-----STLATMAQG 101 (231)
T ss_dssp CHHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHHTTTCCEEEE-----CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHHHHHHHHHHHHHcCCCEEEe-----ccHHHHHHH
Confidence 34667889999999999999999999998654443332223233333322224576665 445554443
No 99
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=83.52 E-value=2.7 Score=38.16 Aligned_cols=80 Identities=19% Similarity=0.087 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCccee-eec----ccCccHHHHHHHHHH--H
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT-TIN----KVCSSGMKAVMLAAQ--S 112 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~-~v~----~~cas~~~al~~A~~--~ 112 (339)
...++++++|+++|+++++||.++.=. .+..+-..+...||++++.... ++. .+++|-..+|..+.+ .
T Consensus 250 ~~~~~i~~~L~~~gl~~~did~~v~Hq-----~~~~i~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L~~~~~~g~ 324 (350)
T 4ewp_A 250 SMAKVAREALDAAGVEPEDLAAFIPHQ-----ANMRIIDEFAKQLKLPESVVVARDIADAGNTSAASIPLAMHRLLEENP 324 (350)
T ss_dssp THHHHHHHHHHHHTCCGGGEEEEEECC-----SCHHHHHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHHHHHHHHCG
T ss_pred hhhHHHHHHHHhhcCChhHhceEEecC-----CCHHHHHHHHHHcCcChHhEEecccccccchHHHHHHHHHHHHHHhCC
Confidence 456788999999999999999987421 2345667888999998543221 232 222333334444433 2
Q ss_pred HHcCCCceEEEEcc
Q 019555 113 IQLGINDIVVAGGM 126 (339)
Q Consensus 113 I~sG~~~~vLv~g~ 126 (339)
++.| |.+|.+|+
T Consensus 325 ~~~G--d~vll~~f 336 (350)
T 4ewp_A 325 ELSG--GLALQIGF 336 (350)
T ss_dssp GGTT--SEEEEEEE
T ss_pred CCCc--CEEEEEEE
Confidence 4444 56776554
No 100
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=81.38 E-value=1.7 Score=40.08 Aligned_cols=41 Identities=5% Similarity=-0.151 Sum_probs=31.4
Q ss_pred HHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCC
Q 019555 44 AIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS 89 (339)
Q Consensus 44 A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~ 89 (339)
+++++|+++|+++++||.++.-.. +......+...||+++.
T Consensus 257 ~i~~aL~~agl~~~dId~v~~H~~-----~~~i~d~~~~~lgl~~~ 297 (382)
T 1u0m_A 257 ALKELAGEHGWDASDLDFYIVHAG-----GPRILDDLSTFLEVDPH 297 (382)
T ss_dssp HHHHHHHTTSCCSSCCSCCEEECS-----HHHHHHHHHHHSCSCGG
T ss_pred HHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCCCHH
Confidence 899999999999999999886221 22344567888999753
No 101
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=81.34 E-value=0.86 Score=38.71 Aligned_cols=67 Identities=19% Similarity=0.112 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHHHHHHH
Q 019555 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLA 109 (339)
Q Consensus 38 ~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~al~~A 109 (339)
.+.....++++|+++|+++++||.|.++..-+.+++-.++--++..|.+..++|.+.+ +.+.++...
T Consensus 36 s~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~iPl~gV-----stL~a~a~~ 102 (213)
T 3r6m_A 36 TKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGV-----STLAAMAQA 102 (213)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEE-----EHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEEEE-----cCHHHHHHh
Confidence 4566689999999999999999999998765554433333233333221114566666 455555443
No 102
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=81.09 E-value=3.4 Score=38.83 Aligned_cols=98 Identities=12% Similarity=0.084 Sum_probs=55.2
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceee
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT 94 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~ 94 (339)
+.|.|.+.+.-+.... .+.. ..+-..+++++||+++|+++++||.+.. ..++......-...+...+|... ..+.
T Consensus 271 a~i~g~~~~~dg~~~~-~p~~-~~~~~~~ai~~al~~Agl~~~dId~ve~-HgtgT~~d~~e~~al~~~~g~~~--~~~~ 345 (428)
T 3kzu_A 271 AEVIGYGMSGDAFHIT-APTE-SGEGAQRCMVAALKRAGIVPDEIDYINA-HGTSTMADTIELGAVERVVGEAA--AKIS 345 (428)
T ss_dssp EEEEEEEEEECCSCSS-SCCT-TCHHHHHHHHHHHHHHTCCGGGCCEEEC-CCCSSTTHHHHHHHHHHHHGGGG--GGCE
T ss_pred EEEEEEEEccCCCCCC-CCCC-CHHHHHHHHHHHHHHcCCCHHHeeEEEe-cCCcchhhHHHHHHHHHHhccCC--Ccee
Confidence 4566666544332211 1111 1235578999999999999999999863 22222111112223344455431 1122
Q ss_pred ec--------ccCccHHHHHHHHHHHHHcCC
Q 019555 95 IN--------KVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 95 v~--------~~cas~~~al~~A~~~I~sG~ 117 (339)
++ ..++++...+..+...++.|.
T Consensus 346 v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ 376 (428)
T 3kzu_A 346 MSSTKSSIGHLLGAAGAAEAVFSTLAIRDNI 376 (428)
T ss_dssp EECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred eCCchhhhCCCchhhHHHHHHHHHHHhccCc
Confidence 22 236788888888889998874
No 103
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=80.73 E-value=3.3 Score=43.14 Aligned_cols=73 Identities=8% Similarity=-0.091 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceee---e----cccCccHHHHHHHHHHH
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT---I----NKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~---v----~~~cas~~~al~~A~~~ 112 (339)
...++++++|+++|+++++||.++. .. .+..+...+..+||++.+....+ + +++++|-..+|..+...
T Consensus 865 ~~~~~~~~al~~agl~~~did~~~~-Hq----~~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~ 939 (979)
T 3tsy_A 865 NVEKCLTQAFDPLGISDWNSLFWIA-HP----GGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKK 939 (979)
T ss_dssp HHHHHHHHHHGGGTCCCGGGSEEEE-CC----SCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCcccceEEE-CC----CChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhh
Confidence 3677889999999999999999764 11 23345667888999985432222 2 24555666677877777
Q ss_pred HHcCC
Q 019555 113 IQLGI 117 (339)
Q Consensus 113 I~sG~ 117 (339)
++.|+
T Consensus 940 ~~~G~ 944 (979)
T 3tsy_A 940 SLKGE 944 (979)
T ss_dssp HHHTT
T ss_pred hcccc
Confidence 77775
No 104
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=80.18 E-value=0.92 Score=38.68 Aligned_cols=60 Identities=12% Similarity=0.086 Sum_probs=39.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeee
Q 019555 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI 95 (339)
Q Consensus 36 ~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v 95 (339)
.-.+.....++++|+++|+++++||.|.++..-+.+++-.++--++..|.+..++|.+.+
T Consensus 44 ~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTGlRiG~~~Ak~La~~~~iPl~gV 103 (218)
T 2a6a_A 44 KHAEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLRVGIATVVGLVSPYDIPVAPL 103 (218)
T ss_dssp GGGGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHGGGTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchHhHHHHHHHHHHHHHHcCCCEEEe
Confidence 345677888999999999999999999998755444333333333333322224566666
No 105
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=79.29 E-value=4.7 Score=37.31 Aligned_cols=76 Identities=17% Similarity=0.044 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec--------ccCccHHHHHHHHHHH
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN--------KVCSSGMKAVMLAAQS 112 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~--------~~cas~~~al~~A~~~ 112 (339)
...+++++|+++|++++|||.+.+... .......+...||+.. .+ +.++ ..++|+...+..+...
T Consensus 296 ~~~ai~~al~~agl~~~dId~ve~~d~-----fa~~~~~~~~~lg~~~-~~-v~~~gg~~~~Gh~~gasG~~~~~~~~~~ 368 (395)
T 4e1l_A 296 PIPATRKALKKAGLSINDIDLIEANEA-----FAAQALAVKNELQIDS-SK-LNVNGGAIALGHPIGASGARILVTLIYE 368 (395)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEECCS-----BHHHHHHHHHHHTCCG-GG-BSTTCCHHHHCCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCh-----hHHHHHHHHHHhCCCC-CC-CCcCCchhhcCCcHHHHHHHHHHHHHHH
Confidence 357899999999999999999985211 0122334456678752 12 2221 1256777778788777
Q ss_pred HHcCCCceEEE
Q 019555 113 IQLGINDIVVA 123 (339)
Q Consensus 113 I~sG~~~~vLv 123 (339)
++....+..|+
T Consensus 369 L~~~~~~~gl~ 379 (395)
T 4e1l_A 369 MQKRKVETGLA 379 (395)
T ss_dssp HHHHTCSEEEE
T ss_pred HHhcCCCEEEE
Confidence 87655566654
No 106
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=76.78 E-value=3.9 Score=37.89 Aligned_cols=76 Identities=9% Similarity=-0.012 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecc--------cCccHHHHHHHHHHH
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK--------VCSSGMKAVMLAAQS 112 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~--------~cas~~~al~~A~~~ 112 (339)
...+++++|+++|++++|||.+.+... .......+...||+.+ ..+.++. .++++...+..+...
T Consensus 294 ~~~a~~~al~~agl~~~dId~ve~~d~-----fa~~~~~~~~~lg~~~--~~v~~~gg~~~~GH~~gasG~~~~~~~~~~ 366 (394)
T 3ss6_A 294 PAPAIRKGLEKVDWSLEDADLLEINEA-----FAAQYLAVEKELDLDR--EKVNVNGSGVGLGHPIGCTGARITVSLIHE 366 (394)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCS-----BHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCCc-----hHHHHHHHHHHhCCCC--CCCCCCcchHhhCCcHHHHHHHHHHHHHHH
Confidence 377889999999999999999985321 0122334456678753 1222221 235666677777777
Q ss_pred HHcCCCceEEE
Q 019555 113 IQLGINDIVVA 123 (339)
Q Consensus 113 I~sG~~~~vLv 123 (339)
++....+..|+
T Consensus 367 L~~~~~~~gl~ 377 (394)
T 3ss6_A 367 LKRRGLEKGIA 377 (394)
T ss_dssp HHHHTCCEEEE
T ss_pred HHhcCCCEEEE
Confidence 87655666654
No 107
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=75.31 E-value=5.6 Score=36.91 Aligned_cols=82 Identities=10% Similarity=0.091 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHc-CC--CCCcceeeec----ccCccHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGA-GI--PNSVVCTTIN----KVCSSGMKAVMLAAQ 111 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~l-gl--~~~~~~~~v~----~~cas~~~al~~A~~ 111 (339)
....++++++|+++|+++++||.++. . + .+..+-..++.+| |+ +......++. ++++|-..+|..+..
T Consensus 291 ~~~~~~i~~~L~~~gl~~~dId~~v~-H--q--an~~i~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~~~~ 365 (392)
T 3led_A 291 PLVSEMIIEHAREIGIDPHGLKRMWL-H--Q--ANINMNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHKHQD 365 (392)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEE-C--S--SCHHHHHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEE-c--C--CCHHHHHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHHHhC
Confidence 45566789999999999999998774 1 1 1334556677775 65 3222222232 223333334444433
Q ss_pred HHHcCCCceEEEEccc
Q 019555 112 SIQLGINDIVVAGGME 127 (339)
Q Consensus 112 ~I~sG~~~~vLv~g~e 127 (339)
.++.| |.+|++|+-
T Consensus 366 ~~~~G--d~vll~gfG 379 (392)
T 3led_A 366 DMAQG--DLGLICSFG 379 (392)
T ss_dssp TCCTT--CEEEEEEEE
T ss_pred CCCCC--CEEEEEEEC
Confidence 44444 567765553
No 108
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=74.21 E-value=8 Score=35.67 Aligned_cols=74 Identities=18% Similarity=0.021 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHH--HHHHcCCCCCcceeeec--------ccCccHHHHHHHHH
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQ--AALGAGIPNSVVCTTIN--------KVCSSGMKAVMLAA 110 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~--ia~~lgl~~~~~~~~v~--------~~cas~~~al~~A~ 110 (339)
...++++||+++|++++|||.+-+. ....... +...||+.+ .+ +.++ ..++++...+..+.
T Consensus 292 ~~~a~~~al~~agl~~~dId~ie~~-------d~f~~~~l~~~~~lg~~~-~~-vn~~gg~~~~GHp~gAsG~~~~~~~~ 362 (392)
T 2vu1_A 292 PIPASRKALERAGWKIGDLDLVEAN-------EAFAAQACAVNKDLGWDP-SI-VNVNGGAIAIGHPIGASGARILNTLL 362 (392)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEC-------CSBHHHHHHHHHHHCCCG-GG-BSTTCCHHHHCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec-------cccHHHHHHHHHHcCCCc-cc-CCCCccHhhhCCChhhHHHHHHHHHH
Confidence 3678999999999999999998852 2222222 356678752 12 1111 23556777778888
Q ss_pred HHHHcCCCceEEE
Q 019555 111 QSIQLGINDIVVA 123 (339)
Q Consensus 111 ~~I~sG~~~~vLv 123 (339)
..++.+..++.|+
T Consensus 363 ~~L~~~~~~~gl~ 375 (392)
T 2vu1_A 363 FEMKRRGARKGLA 375 (392)
T ss_dssp HHHHHHTCSEEEE
T ss_pred HHHhccCCCEEEE
Confidence 8888766677765
No 109
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=72.34 E-value=11 Score=34.79 Aligned_cols=95 Identities=13% Similarity=-0.015 Sum_probs=57.0
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHH--HHcCCCC-Ccc
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAA--LGAGIPN-SVV 91 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia--~~lgl~~-~~~ 91 (339)
+.|+|.+.+..... .. ..-...|+++||+++|++++|||.+-+- .......+. +.||+.+ ..+
T Consensus 279 a~i~g~~~~~~~p~------~~-~~~~~~a~~~al~~Agl~~~dId~ie~h-------eafa~~~l~~~~~lg~~~~~~~ 344 (401)
T 1ulq_A 279 ARVRAIAVAGVPPR------IM-GIGPVPATRKALERAGLSFSDLGLIELN-------EAFAAQALAVLREWSLSMEDQR 344 (401)
T ss_dssp EEEEEEEEEECCGG------GG-GGTHHHHHHHHHHHTTCCGGGCSEEEEC-------CSBHHHHHHHHHHHTCCTTCTT
T ss_pred EEEEEEEEecCCcc------cc-chhHHHHHHHHHHHcCCCHHHcCEEEEe-------cchHHHHHHHHHHcCCCCCCCc
Confidence 67777766543221 11 1123688999999999999999988752 112222222 3467621 112
Q ss_pred eeeec--------ccCccHHHHHHHHHHHHHcCCCceEEEE
Q 019555 92 CTTIN--------KVCSSGMKAVMLAAQSIQLGINDIVVAG 124 (339)
Q Consensus 92 ~~~v~--------~~cas~~~al~~A~~~I~sG~~~~vLv~ 124 (339)
+.++ ..++++...+..+...++.+..++.|+.
T Consensus 345 -vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~~~gl~~ 384 (401)
T 1ulq_A 345 -LNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQFGLAT 384 (401)
T ss_dssp -BSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred -cCCCCcccccCCCcchHHHHHHHHHHHHHhhcCCCEEEEE
Confidence 1211 1245677778888888998878888863
No 110
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=71.69 E-value=3.3 Score=38.82 Aligned_cols=100 Identities=14% Similarity=0.098 Sum_probs=56.7
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCC-CCcHHHHHHHHcCCCCC-cce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS-VVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~-~~~~~~~ia~~lgl~~~-~~~ 92 (339)
+.|.|.+.+--++... .+.. ...-..+++++||+++|+++++||.+.. ..++... ...-...+...+|.... ++.
T Consensus 270 a~i~g~~~~~dg~~~~-~p~~-~~~~~~~ai~~al~~Agl~~~dId~ve~-HgtgT~~~d~~e~~a~~~~~g~~~~~~~v 346 (427)
T 3ho9_A 270 AELVGFGMSSDAYHMT-SPPE-NGAGAALAMANALRDAGIEASQIGYVNA-HGTSTPAGDKAEAQAVKTIFGEAASRVLV 346 (427)
T ss_dssp EEEEEEEEEECCSBTT-BCCT-TCHHHHHHHHHHHHHHTCCGGGCCEEEC-CCCSCHHHHHHHHHHHHHHHGGGGGTSEE
T ss_pred EEEEEEeecCCCCCcC-CCCC-CHHHHHHHHHHHHHHcCCCHHHccEEEe-cCCcCCCcCHHHHHHHHHHhcccCCCeEE
Confidence 4567766544333211 1111 2244578899999999999999999884 2222211 11122334444554211 111
Q ss_pred ee----e-cccCccHHHHHHHHHHHHHcCC
Q 019555 93 TT----I-NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 93 ~~----v-~~~cas~~~al~~A~~~I~sG~ 117 (339)
.. + ...+++|...+..+...++.|.
T Consensus 347 ~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ 376 (427)
T 3ho9_A 347 SSTKSMTGHLLGAAGAVESIYSILALRDQA 376 (427)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred ecchHhhccCHHHHHHHHHHHHHHHHhcCC
Confidence 11 1 2356788889999999999874
No 111
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=71.58 E-value=3.4 Score=38.57 Aligned_cols=96 Identities=16% Similarity=0.149 Sum_probs=54.5
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCCCccee
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSVVCT 93 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~~~~~~ 93 (339)
+.|.|.+.+--++... ..+ .+-..+++++||+++|+++++||.|.. ..++...+ ..-...+...+|- ..+..
T Consensus 259 a~i~g~~~~~dg~~~~---~p~-~~~~~~ai~~Al~~Agl~~~dId~ve~-Hgtgt~~~D~~E~~al~~~~~~--~~~v~ 331 (412)
T 4ewg_A 259 AEIVGFGCNSDGAHMT---QPT-ASTMARAMQLALEDAKLDANAIAYVNA-HGTSTDRGDVAESQATARTFGE--RMPIS 331 (412)
T ss_dssp EEEEEEEEEECSSCSS---SCC-HHHHHHHHHHHHHHTTCCGGGEEEEEC-CCCCCHHHHHHHHHHHHHHHCT--TCEEE
T ss_pred EEEEEEEEcCCCCCCC---CCC-HHHHHHHHHHHHHHcCCCHHHCCEEEc-cCCCCccccHHHHHHHHHHcCC--CCeee
Confidence 4466766554433221 112 456688999999999999999998874 22221111 1111223333432 12211
Q ss_pred ee-----cccCccHHHHHHHHHHHHHcCC
Q 019555 94 TI-----NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 94 ~v-----~~~cas~~~al~~A~~~I~sG~ 117 (339)
.+ ...+++|...+..+...++.|.
T Consensus 332 s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ 360 (412)
T 4ewg_A 332 SLKSYVGHTLGACGALEAWWTIEMMKRNW 360 (412)
T ss_dssp CTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred CccccccccHHHHHHHHHHHHHHHHhcCC
Confidence 11 1346778888888888898874
No 112
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=71.50 E-value=2.4 Score=39.43 Aligned_cols=100 Identities=19% Similarity=0.199 Sum_probs=54.9
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCC-Ccce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPN-SVVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~-~~~~ 92 (339)
+.|.|.+.+--++... .++. ..+-..+++++||+++|+++++||.+.. ..++...+ ..-...+...+|... .++.
T Consensus 253 a~i~g~~~~~d~~~~~-~p~~-~~~~~~~ai~~al~~Agl~~~dId~ve~-Hgtgt~~gD~~E~~al~~~~g~~~~~~~v 329 (408)
T 1j3n_A 253 AELVGFGRSADAHHIT-EPHP-EGKGAALAMARALKDAGIAPEQVGYINA-HGTSTPVGDRAEVLAIKRVFGDHAKRLMV 329 (408)
T ss_dssp EEEEEEEEEECCSCSS-CCCT-TCHHHHHHHHHHHHHHTCCGGGCCEEEC-CCCSCHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred EEEEEEEEcCCCCCCC-CCCC-CHHHHHHHHHHHHHHcCCCHHHcCEEEE-eCCcCcccCHHHHHHHHHHhcCcCCCceE
Confidence 4566666544333211 1111 1245578899999999999999998874 22111100 011223334444321 1111
Q ss_pred e----ee-cccCccHHHHHHHHHHHHHcCC
Q 019555 93 T----TI-NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 93 ~----~v-~~~cas~~~al~~A~~~I~sG~ 117 (339)
. .+ ...++++...+..+...++.|.
T Consensus 330 ~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ 359 (408)
T 1j3n_A 330 SSTKSMIGHLLGAAGAVEAIATVQALYHGV 359 (408)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred ECchhhhccCHHHHHHHHHHHHHHHHhcCC
Confidence 1 11 2346788888889999999883
No 113
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=70.03 E-value=6.4 Score=36.42 Aligned_cols=76 Identities=16% Similarity=0.005 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecc--------cCccHHHHHHHHHHH
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK--------VCSSGMKAVMLAAQS 112 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~--------~cas~~~al~~A~~~ 112 (339)
...+++++|+++|+++++||.+-+.-. .......+.+.+|+.+ .+ +.++. .++++...+..+...
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ve~~d~-----f~~~~~~~~~~lg~~~-~~-~n~~gg~~~~GH~~gasG~~~~~~~~~~ 369 (396)
T 4dd5_A 297 PVPATKKALEAANMTIEDIDLVEANEA-----FAAQSVAVIRDLNIDM-NK-VNVNGGAIAIGHPIGCSGARILTTLLYE 369 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCS-----BHHHHHHHHHHHTCCT-TS-BSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCh-----HHHHHHHHHHHhCCCC-Cc-cCCCCchhhccCcHHHHHHHHHHHHHHH
Confidence 477889999999999999999985321 1112223445677752 11 11211 244667777788888
Q ss_pred HHcCCCceEEE
Q 019555 113 IQLGINDIVVA 123 (339)
Q Consensus 113 I~sG~~~~vLv 123 (339)
++....++.|+
T Consensus 370 L~~~~~~~gl~ 380 (396)
T 4dd5_A 370 MKRRDAKTGLA 380 (396)
T ss_dssp HHHHTCSEEEE
T ss_pred HHhcCCCeEEE
Confidence 88666666665
No 114
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=69.76 E-value=6.7 Score=36.28 Aligned_cols=74 Identities=16% Similarity=0.044 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHH--HHHHHHcCCCCCcceeeec--------ccCccHHHHHHHHH
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPA--RQAALGAGIPNSVVCTTIN--------KVCSSGMKAVMLAA 110 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~--~~ia~~lgl~~~~~~~~v~--------~~cas~~~al~~A~ 110 (339)
...|+++||+++|++++|||.+-+.- .... ..+...||+.+ .+ +.++ ..++++...+..+.
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~d-------~f~~~~l~~~~~lg~~~-~~-vn~~gg~~~~GHp~gAsG~~~~~~~~ 367 (397)
T 1wl4_A 297 PIPAIKQAVTKAGWSLEDVDIFEINE-------AFAAVSAAIVKELGLNP-EK-VNIEGGAIALGHPLGASGCRILVTLL 367 (397)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECC-------SBHHHHHHHHHHHTCCG-GG-BSTTCCHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEec-------ccHHHHHHHHHHcCCCC-cC-cCCCcCccccCCChhhhHHHHHHHHH
Confidence 36889999999999999999988531 2222 23456678742 11 2221 12446666777778
Q ss_pred HHHHcCCCceEEE
Q 019555 111 QSIQLGINDIVVA 123 (339)
Q Consensus 111 ~~I~sG~~~~vLv 123 (339)
..++.+..++.|+
T Consensus 368 ~~L~~~~~~~gl~ 380 (397)
T 1wl4_A 368 HTLERMGRSRGVA 380 (397)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHhhcCCCEEEE
Confidence 8888766677775
No 115
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=69.15 E-value=8.3 Score=35.89 Aligned_cols=73 Identities=11% Similarity=0.031 Sum_probs=46.8
Q ss_pred HHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHH--HHHHHcCCCCCcceeeecc--------cCccHHHHHHHHHH
Q 019555 42 SIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPAR--QAALGAGIPNSVVCTTINK--------VCSSGMKAVMLAAQ 111 (339)
Q Consensus 42 ~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~--~ia~~lgl~~~~~~~~v~~--------~cas~~~al~~A~~ 111 (339)
..++++||+++|++++|||.+-+- ...... ...+.||+.+ ..+.++. .++++...+..+..
T Consensus 308 ~~a~~~al~~Agl~~~dId~~e~h-------daf~~~~l~~~~~lg~~~--~~vn~~Gg~~~~GHp~gasG~~~~~~~~~ 378 (407)
T 3svk_A 308 TPATRKVLDRAGLTIDDIDLFELN-------EAFASVVLKFQKDLNIPD--EKLNVNGGAIAMGHPLGATGAMITGTMVD 378 (407)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEC-------CSBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEe-------ChhHHHHHHHHHHhCCCC--CCCCCCCcHhheeCcHHHHHHHHHHHHHH
Confidence 578999999999999999998862 112222 3346688853 2222221 24567777777777
Q ss_pred HHHcCCCceEEE
Q 019555 112 SIQLGINDIVVA 123 (339)
Q Consensus 112 ~I~sG~~~~vLv 123 (339)
.++....++.|+
T Consensus 379 ~L~~~~~~~gl~ 390 (407)
T 3svk_A 379 ELERRNARRALI 390 (407)
T ss_dssp HHHHHTCCEEEE
T ss_pred HHHhcCCCEEEE
Confidence 777545565554
No 116
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=69.00 E-value=11 Score=34.95 Aligned_cols=82 Identities=13% Similarity=-0.071 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHcCCCCCccCe----EEEEeecCCCCCCcHHHHHHHHcCCCCCccee-----ee--cccCccHHHHHHH
Q 019555 40 LGSIAIECALKRANVKPLLVQE----VFFGNVLSANLGQAPARQAALGAGIPNSVVCT-----TI--NKVCSSGMKAVML 108 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~----i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~-----~v--~~~cas~~~al~~ 108 (339)
...++++++|+++|++++ ||. ++. . + .+..+-..+...||++++.... .- +.+++|...+|..
T Consensus 291 ~~~~~i~~~L~~agl~~~-id~~di~~v~-H--q--~~~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~L~~ 364 (406)
T 2d3m_A 291 NVEACLIDVFKSVGITPP-EDWNSLFWIP-H--P--GGRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDE 364 (406)
T ss_dssp HHHHHHHHHHHTTTCCCC-SSGGGSEEEE-C--C--SCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCC-CCccceEEEE-C--C--CCHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHH
Confidence 455788899999999988 887 443 1 1 2334556788899997543222 11 3344455555555
Q ss_pred HHHHH-HcC-----C-CceEEEEccc
Q 019555 109 AAQSI-QLG-----I-NDIVVAGGME 127 (339)
Q Consensus 109 A~~~I-~sG-----~-~~~vLv~g~e 127 (339)
+.+.= +.| . .+.+|++|+-
T Consensus 365 ~~~~g~~~G~~~~g~~~d~vll~~fG 390 (406)
T 2d3m_A 365 MRRKSAAKGLETYGEGLEWGVLLGFG 390 (406)
T ss_dssp HHHHHHHTTCSBTTTTCSEEEEEEEE
T ss_pred HHHhccccCCCccCCCcceEEEEEec
Confidence 43322 444 1 2677776654
No 117
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=68.86 E-value=10 Score=29.87 Aligned_cols=59 Identities=15% Similarity=-0.005 Sum_probs=40.3
Q ss_pred EEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCC
Q 019555 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP 87 (339)
Q Consensus 16 ~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~ 87 (339)
+++|+|. |+ +.+ .+...++++++|+++|+.+..|+.+..-..-. .-..-..++..+|++
T Consensus 12 lvvGIGc----rr-----g~~-~~~i~~ai~~aL~~~~l~~~~v~~latid~K~---dE~gL~~~A~~lg~p 70 (145)
T 2w6k_A 12 LIAGIGC----RR-----GCS-AEHLRALLERTLGEHGRSLAELDALASIDGKR---DEPGLRQLATLLERP 70 (145)
T ss_dssp EEEEEEE----CT-----TCC-HHHHHHHHHHHHHHTTCCGGGCCEEEEECSSS---CCHHHHHHHHHHTSC
T ss_pred EEEEEee----CC-----CCC-HHHHHHHHHHHHHHcCCCHHHcceEechHHhC---CCHHHHHHHHHhCCC
Confidence 7899886 23 234 44558899999999999999999887543221 122235677788764
No 118
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=68.81 E-value=6.9 Score=35.44 Aligned_cols=29 Identities=17% Similarity=0.114 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEee
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNV 67 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~ 67 (339)
+....+++++|+++|+++++||.|.++..
T Consensus 54 ~~l~~~i~~~L~~ag~~~~did~Iav~~g 82 (334)
T 3eno_A 54 EVIDTVISRALEKAKISIHDIDLIGFSMG 82 (334)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 46678999999999999999999998653
No 119
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=66.96 E-value=6.9 Score=36.40 Aligned_cols=96 Identities=25% Similarity=0.071 Sum_probs=53.6
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCCCccee
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSVVCT 93 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~~~~~~ 93 (339)
+.|.|.+.+--++... .+ ++ -..+++++||+++|+++++||.+.. ..++...+ ..-...+...+|-. ..+.-
T Consensus 260 a~I~g~~~~~dg~~~~-~p--~~--~~~~ai~~al~~Agl~~~dId~ve~-Hgtgt~~~D~~E~~al~~~~g~~-~~~v~ 332 (415)
T 1tqy_B 260 GELAGCASTFDPAPGS-GR--PA--GLERAIRLALNDAGTGPEDVDVVFA-DGAGVPELDAAEARAIGRVFGRE-GVPVT 332 (415)
T ss_dssp EEEEEEEEEECCCTTC-CC--CC--SHHHHHHHHHHHHTCCGGGCCEEEC-CCCCSHHHHHHHHHHHHHHHCTT-CSEEE
T ss_pred EEEEEEEEccCCCCCC-CC--CH--HHHHHHHHHHHHcCCCHhHCCEEEE-eCCCCcCcCHHHHHHHHHHhCCC-CceEe
Confidence 4567776554433321 11 11 4568899999999999999998874 22221100 01111222333432 11211
Q ss_pred e----e-cccCccHHHHHHHHHHHHHcCC
Q 019555 94 T----I-NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 94 ~----v-~~~cas~~~al~~A~~~I~sG~ 117 (339)
. + ...+++|...+..+...++.|.
T Consensus 333 s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ 361 (415)
T 1tqy_B 333 VPKTTTGRLYSGGGPLDVVTALMSLREGV 361 (415)
T ss_dssp CGGGGTCBCGGGHHHHHHHHHHHHHHHTS
T ss_pred ccchhhccChHHHHHHHHHHHHHHHhcCC
Confidence 1 1 1246788888888889999886
No 120
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=66.23 E-value=12 Score=34.07 Aligned_cols=45 Identities=11% Similarity=0.051 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHcC------CCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCC
Q 019555 39 KLGSIAIECALKRAN------VKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS 89 (339)
Q Consensus 39 ~L~~~A~~~Al~dag------l~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~ 89 (339)
+-..++++++|+++| +++++||.+ . .. .+..+...+...||+++.
T Consensus 267 ~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~-H~----~~~~i~d~~~~~lgl~~~ 317 (374)
T 2h84_A 267 SGIEAFVDTLLDKAKLQTSTAISAKDCEFL-I-HT----GGKSILMNIENSLGIDPK 317 (374)
T ss_dssp HHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-E-CC----CCHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHhcCCccccCCChhhcCEe-E-CC----CCHHHHHHHHHHcCCCHH
Confidence 445678899999999 999999988 4 22 133455678889999754
No 121
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=66.07 E-value=19 Score=37.25 Aligned_cols=100 Identities=18% Similarity=0.135 Sum_probs=59.4
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCCC-cce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNS-VVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~~-~~~ 92 (339)
+.|.|.+..--++..+ ... ...+-..+++++||+++|+++++||.+.. ..++...+ +.-...+...+|.... ...
T Consensus 264 a~I~G~~~~~dg~~~~-~~~-p~~~~~~~~i~~Al~~Agl~p~dId~ve~-HgtgT~~gD~~E~~al~~~f~~~~~~~~~ 340 (915)
T 2qo3_A 264 AVVRGSALNQDGASNG-LSA-PSGPAQRRVIRQALESCGLEPGDVDAVEA-HGTGTALGDPIEANALLDTYGRDRDADRP 340 (915)
T ss_dssp EEEEEEEEEECCSCSS-TTC-CCHHHHHHHHHHHHHHTTCCGGGCCEEEC-CCCCCTTTHHHHHHHHHHHTSSSCCTTSC
T ss_pred EEEEEEEEecCCCccC-CCC-CCHHHHHHHHHHHHHHcCCCHHHCcEEEe-cCCCCccCCHHHHHHHHHHhccccCCCCc
Confidence 4577776554444322 111 12455678999999999999999999874 22232222 2222345556665211 111
Q ss_pred eeec--------ccCccHHHHHHHHHHHHHcCC
Q 019555 93 TTIN--------KVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 93 ~~v~--------~~cas~~~al~~A~~~I~sG~ 117 (339)
..+. ..+++|...+..+...++.|.
T Consensus 341 ~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ 373 (915)
T 2qo3_A 341 LWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGE 373 (915)
T ss_dssp EEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred ccccCcccceeCCccccchHHHHHHHHHHhcCC
Confidence 2221 246788888999999998875
No 122
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=64.37 E-value=15 Score=34.61 Aligned_cols=74 Identities=15% Similarity=0.097 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHH--HHHcCCCCCcceeeecc--------cCccHHHHHHHHH
Q 019555 41 GSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQA--ALGAGIPNSVVCTTINK--------VCSSGMKAVMLAA 110 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~i--a~~lgl~~~~~~~~v~~--------~cas~~~al~~A~ 110 (339)
...|+++||+++|++++|||.+-+- .. .....+ ...||+.+ +.+.++. .+++|...+..+.
T Consensus 317 ~~~A~~~Al~~AGl~~~DId~iE~h---~a----ft~~~l~~~~~lG~~~--~~vN~~GG~~a~GHp~GAsG~~~~~~~v 387 (442)
T 2wu9_A 317 PAVAIPAAVKAAGLELDDIDLFEIN---EA----FASQFVYCRNKLGLDP--EKINVNGGAMAIGHPLGATGARCVATLL 387 (442)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEC---CS----BHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEe---CC----ChHHHHHHHHHhCCCC--CCcCCCccHhhcCCchhHHHHHHHHHHH
Confidence 4689999999999999999988752 11 111111 24577742 1222211 2346677778888
Q ss_pred HHHHcCC--CceEEE
Q 019555 111 QSIQLGI--NDIVVA 123 (339)
Q Consensus 111 ~~I~sG~--~~~vLv 123 (339)
..++.+. .++.|+
T Consensus 388 ~~Lr~~~~~~~~gla 402 (442)
T 2wu9_A 388 HEMKRRGKDCRFGVV 402 (442)
T ss_dssp HHHHHHCTTCCEEEE
T ss_pred HHHhccCCCCCEEEE
Confidence 8888765 677774
No 123
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=63.21 E-value=20 Score=34.52 Aligned_cols=82 Identities=15% Similarity=0.080 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcc-eeeec--------ccCccHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTIN--------KVCSSGMKAVMLA 109 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~-~~~v~--------~~cas~~~al~~A 109 (339)
.-...|+++||+++|++++|||.+=+-.+ + ..........||+....+ .+.++ ...+++...|...
T Consensus 317 ~~~~~a~~~al~~agl~~~did~~E~~dA---F--~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~ 391 (520)
T 4egv_A 317 PASVTAVNEALRVAGIGLDDVAAFDLYSC---F--PFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEA 391 (520)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEECCS---S--SHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCHHHCCEEEEeCC---c--HHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHH
Confidence 34577899999999999999998765321 1 112233445678742211 12222 2466888899999
Q ss_pred HHHHHcCCCceEEEEc
Q 019555 110 AQSIQLGINDIVVAGG 125 (339)
Q Consensus 110 ~~~I~sG~~~~vLv~g 125 (339)
...++.+..+..|+.+
T Consensus 392 v~~lr~~~~~~~L~~~ 407 (520)
T 4egv_A 392 VNEMRDKPGQFALVGA 407 (520)
T ss_dssp HHHHHHSTTCEEEEEE
T ss_pred HHHHhcCCCCceEEeC
Confidence 9999988888888743
No 124
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=62.21 E-value=5.2 Score=37.39 Aligned_cols=100 Identities=9% Similarity=0.038 Sum_probs=55.0
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCC-Ccce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPN-SVVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~-~~~~ 92 (339)
+.|.|.+.+--++... .++.+ .+-..+++++||+++|+++++||.+.. ..++...+ ..-...+...+|... ..+.
T Consensus 261 a~I~g~~~~~dg~~~~-~p~~~-g~~~~~ai~~al~~agl~~~dId~ve~-Hgtgt~~gD~~E~~al~~~f~~~~~~~~v 337 (424)
T 1tqy_A 261 AEISGYATRCNAYHMT-GLKAD-GREMAETIRVALDESRTDATDIDYINA-HGSGTRQNDRHETAAYKRALGEHARRTPV 337 (424)
T ss_dssp EEEEEEEEEECSSCSS-CCCTT-CHHHHHHHHHHHHHHTCCGGGCCEEEC-CCCCCHHHHHHHHHHHHHHTGGGGGGSCE
T ss_pred EEEeeeEEcCCCCCCC-CCCCC-HHHHHHHHHHHHHHcCCCHHHCCEEEe-cCccCcCcCHHHHHHHHHHhcccCCCCee
Confidence 4566666544333321 11111 144578999999999999999998874 22221100 011122334444311 1222
Q ss_pred ee----e-cccCccHHHHHHHHHHHHHcCC
Q 019555 93 TT----I-NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 93 ~~----v-~~~cas~~~al~~A~~~I~sG~ 117 (339)
-. + ...++++...+..+...++.|.
T Consensus 338 ~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ 367 (424)
T 1tqy_A 338 SSIKSMVGHSLGAIGSLEIAACVLALEHGV 367 (424)
T ss_dssp ECTHHHHCBCTTTHHHHHHHHHHHHHHHCE
T ss_pred eccccccccChhhhHHHHHHHHHHHHHcCC
Confidence 11 1 2346788888889999999884
No 125
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=62.19 E-value=2.9 Score=39.77 Aligned_cols=62 Identities=5% Similarity=-0.034 Sum_probs=38.1
Q ss_pred EEeCHHHHHhcCCCccEEEEeeEEeee---CCC-ccccchHHHHHHHHHHcCCCCCCCcEEEeecc
Q 019555 269 VLVSGVKALELGLQVIAKIRGFADAAQ---APE-WFTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (339)
Q Consensus 269 iL~s~~~a~~~~~~~~~~i~g~~~~~~---~~~-~~~~~~~~a~~~al~~agl~~~DId~~~~hd~ 330 (339)
+|+.++.++..+..+..+..|.+...- ++. ....-...|++++|+++|++++|||++.+--+
T Consensus 19 ~v~n~el~~~~g~~~~~~~~Gig~r~~~va~~~E~~~~La~~Aa~~AL~~agi~~~dId~IivaT~ 84 (460)
T 2v4w_A 19 YVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTE 84 (460)
T ss_dssp EEEHHHHHHHTTCCTTCCCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECS
T ss_pred EecHHHHHHHhCCCHHHeeeeeeeEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 456666666555543333445544431 111 11122368999999999999999999976543
No 126
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=60.11 E-value=9.1 Score=36.10 Aligned_cols=78 Identities=15% Similarity=0.164 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCCCcceee----e-cccCccHHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSVVCTT----I-NKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~~~~~~~----v-~~~cas~~~al~~A~~~ 112 (339)
+-..+++++||+++|+++++||.+.. ..++...+ ..-...+...+|-....+.-. + ...+++|...+..+...
T Consensus 308 ~~~~~ai~~al~~Agl~~~dId~ve~-Hgtgt~~~d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~ 386 (451)
T 4ddo_A 308 SGAMRAMKLALRMGDVAPEQVDYVNA-HATSTPVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILA 386 (451)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEC-CCCSCHHHHHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEe-cCCcCcccCHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHHH
Confidence 34578999999999999999999874 22221100 011122333344321122111 1 13467888888888999
Q ss_pred HHcCC
Q 019555 113 IQLGI 117 (339)
Q Consensus 113 I~sG~ 117 (339)
++.|.
T Consensus 387 l~~~~ 391 (451)
T 4ddo_A 387 LRDGV 391 (451)
T ss_dssp HHHTE
T ss_pred HhcCC
Confidence 99884
No 127
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=58.55 E-value=19 Score=33.09 Aligned_cols=97 Identities=12% Similarity=-0.003 Sum_probs=55.1
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCC-ccee
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS-VVCT 93 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~-~~~~ 93 (339)
+.|.|.+.+..... .. ..-...++++||+++|++++|||.+-+.-. + ......+.+.||+.+. ...+
T Consensus 268 a~I~g~~~~~~~p~------~~-~~~~~~a~~~al~~Agl~~~dId~ve~~d~---f--~~~~~~~~~~lg~~~~~~~~v 335 (390)
T 1wdk_C 268 AVIRSMAVAGVDPA------IM-GYGPVPATQKALKRAGLNMADIDFIELNEA---F--AAQALPVLKDLKVLDKMNEKV 335 (390)
T ss_dssp EEEEEEEEEECCGG------GG-GGTHHHHHHHHHHHHTCCGGGCCEEEECCS---B--HHHHHHHHHHTTCGGGHHHHB
T ss_pred EEEEEEEEeccChh------hc-chhHHHHHHHHHHHcCCChhhCcEEEeccC---C--HHHHHHHHHHcCCCCCCCCcC
Confidence 56777766542211 11 112368899999999999999999874211 1 0112233455776310 0011
Q ss_pred eec--------ccCccHHHHHHHHHHHHHcCCCceEEE
Q 019555 94 TIN--------KVCSSGMKAVMLAAQSIQLGINDIVVA 123 (339)
Q Consensus 94 ~v~--------~~cas~~~al~~A~~~I~sG~~~~vLv 123 (339)
.++ ..++++...+..+...++.+..++.|+
T Consensus 336 n~~gg~~~~GHp~gasG~~~~~~~~~~L~~~~~~~gl~ 373 (390)
T 1wdk_C 336 NLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLS 373 (390)
T ss_dssp STTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCcCcccccCCcchhHHHHHHHHHHHHhhcCCCEEEE
Confidence 111 124566667788888888776666665
No 128
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=58.47 E-value=14 Score=33.97 Aligned_cols=77 Identities=14% Similarity=0.072 Sum_probs=45.8
Q ss_pred HHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCC-cceeeec--------ccCccHHHHHHHHHHH
Q 019555 42 SIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS-VVCTTIN--------KVCSSGMKAVMLAAQS 112 (339)
Q Consensus 42 ~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~-~~~~~v~--------~~cas~~~al~~A~~~ 112 (339)
..++++||+++|++++|||.+-+-... ........+.||+-+. ...+.++ ..++++...+..+...
T Consensus 285 ~~a~~~al~~agl~~~did~ve~h~~f-----~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~ 359 (387)
T 3goa_A 285 VPASKLALKKAGLSASDIDVFEMNEAF-----AAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINL 359 (387)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSB-----HHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEeCcc-----hHHHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHH
Confidence 688999999999999999998852111 0112223456777100 0111111 1245677777777777
Q ss_pred HHcCCCceEEE
Q 019555 113 IQLGINDIVVA 123 (339)
Q Consensus 113 I~sG~~~~vLv 123 (339)
++....++.|+
T Consensus 360 L~~~~~~~gl~ 370 (387)
T 3goa_A 360 MERKDAQFGLA 370 (387)
T ss_dssp HHHTTCSEEEE
T ss_pred HHhcCCCEEEE
Confidence 87655565554
No 129
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=58.22 E-value=18 Score=37.52 Aligned_cols=99 Identities=20% Similarity=0.142 Sum_probs=57.8
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCC--CCcc
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIP--NSVV 91 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~--~~~~ 91 (339)
+.|.|.+..--++..+. .. ...+-..+++++||+++|+++++||.+.. ..++...+ +.-...+...+|.. ...+
T Consensus 286 a~I~G~~~~~dg~~~~~-~~-P~~~~q~~ai~~Al~~Agl~p~dId~vea-HgtgT~~gD~~E~~al~~~fg~~~~~~~~ 362 (917)
T 2hg4_A 286 AVLRGSAVNQDGASNGL-TA-PSGPAQQRVIRRALENAGVRAGDVDYVEA-HGTGTRLGDPIEVHALLSTYGAERDPDDP 362 (917)
T ss_dssp EEEEEEEEEECCSCSSS-SC-CCHHHHHHHHHHHHHHHTCCGGGCCEEEC-CCCCCTTHHHHHHHHHHTTTTTSSCTTSC
T ss_pred EEEEEEEEecCCCccCC-CC-CCHHHHHHHHHHHHHHcCCCHHHCCEEee-ccCCCccCcHHHHHHHHHHhccccCCCCc
Confidence 55777776555544321 11 12455678999999999999999999874 22222111 11112233334432 1112
Q ss_pred eeee--------cccCccHHHHHHHHHHHHHcCC
Q 019555 92 CTTI--------NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 92 ~~~v--------~~~cas~~~al~~A~~~I~sG~ 117 (339)
..+ ...+++|...+..+...++.|.
T Consensus 363 -~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ 395 (917)
T 2hg4_A 363 -LWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGE 395 (917)
T ss_dssp -CEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTE
T ss_pred -eeccCcccceecchhhhHHHHHHHHHHHHhcCC
Confidence 111 1246788889999999999875
No 130
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=57.16 E-value=27 Score=36.42 Aligned_cols=101 Identities=12% Similarity=0.084 Sum_probs=58.0
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCCCccee
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSVVCT 93 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~~~~~~ 93 (339)
..|.|.+..--+.....+.. ...+-..+++++||+++|+++++||.|-. ..++...+ +.-...+...++-....+..
T Consensus 246 a~I~g~~~n~dg~~~~~~t~-P~~~~q~~~i~~Al~~Agl~p~dIdyvEa-HgTgT~~gD~~E~~Al~~~f~~~~~~~~~ 323 (965)
T 3hhd_A 246 ATILNAGTNTDGFKEQGVTF-PSGDIQEQLIRSLYQSAGVAPESFEYIEA-HGTGTKVGDPQELNGITRALCATRQEPLL 323 (965)
T ss_dssp EEEEEEEEEECCCCTTCTTS-CCHHHHHHHHHHHHHHTTCCGGGEEEEEC-CCCCCTTHHHHHHHHHHHHHCSSCSSCEE
T ss_pred EEEEeeeccCCCCCCCCCcC-CCHHHHHHHHHHHHHHhCCCHHHhccccc-cCCCCCCCCHHHHHHHHHHhcccCCCcee
Confidence 45777766554433111111 22445678999999999999999998873 22332221 11122333444432111211
Q ss_pred --e----e-cccCccHHHHHHHHHHHHHcCC
Q 019555 94 --T----I-NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 94 --~----v-~~~cas~~~al~~A~~~I~sG~ 117 (339)
. + ...+++|...+..+..+++.|.
T Consensus 324 vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ 354 (965)
T 3hhd_A 324 IGSTKSNMGHPEPASGLAALAKVLLSLEHGL 354 (965)
T ss_dssp EECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred eeccccccccchhhhhHHHHHHHHHHHhcCC
Confidence 1 1 1357788999999999999884
No 131
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=54.46 E-value=14 Score=34.19 Aligned_cols=100 Identities=16% Similarity=0.108 Sum_probs=52.2
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCC-Ccce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPN-SVVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~-~~~~ 92 (339)
+.|.|.+.+.-++... .+. ...+-..+++++||+++|+++++||.+.. ..++...+ ..-...+...++... ..+.
T Consensus 255 a~i~g~~~~~dg~~~~-~~~-~~~~~~~~a~~~al~~agl~~~dId~ve~-HgtgT~~~d~~e~~al~~~~~~~~~~~~v 331 (413)
T 3o04_A 255 AEIVGYGATGDAYHIT-APA-PNGEGAARAMKMAIDDAGLTPDKVDYINA-HGTSTPYNDEYETQAIKTVFGEHAKKLAI 331 (413)
T ss_dssp EEEEEEEEEECCSCSS-SCC-GGGHHHHHHHHHHHHHHTCCGGGCCEEEC-CCCCCHHHHHHHHHHHHHHHGGGTTTSEE
T ss_pred EEEEEEEEcCCCCCCC-CCC-CCHHHHHHHHHHHHHHcCCCHHHcCEEEE-eCCcCcccCHHHHHHHHHHhcccCCCCce
Confidence 4566665443332211 111 12244678999999999999999999874 21121101 111122233333211 1111
Q ss_pred eee-----cccCccHHHHHHHHHHHHHcCC
Q 019555 93 TTI-----NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 93 ~~v-----~~~cas~~~al~~A~~~I~sG~ 117 (339)
... ...+++|...+..+...++.|.
T Consensus 332 ~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ 361 (413)
T 3o04_A 332 SSTKSMTGHTLGASGGIEAIFALLTIRDNI 361 (413)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred ecccccccccHHHHHHHHHHHHHHHHHhCC
Confidence 111 1246677777888888888764
No 132
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=54.43 E-value=13 Score=34.29 Aligned_cols=80 Identities=14% Similarity=-0.058 Sum_probs=47.0
Q ss_pred HHHHHHHHHHcCCCC-CccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceee---e----cccCccHHHHHHHHHHH-
Q 019555 42 SIAIECALKRANVKP-LLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT---I----NKVCSSGMKAVMLAAQS- 112 (339)
Q Consensus 42 ~~A~~~Al~dagl~~-~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~---v----~~~cas~~~al~~A~~~- 112 (339)
.++++++|+++|+++ ++| .++. . + .+..+-..++.+||++++.-..+ + +++++|-..+|..+.+.
T Consensus 280 ~~~i~~~L~~~gl~~~~di-~~v~-H--q--~n~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~ 353 (393)
T 3ov2_A 280 GRSLERALAPLGVREWNDV-FWVA-H--P--GNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRS 353 (393)
T ss_dssp HHHHHHHHGGGTCCSGGGS-EEEE-C--C--CCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcccCc-EEEE-C--C--CChHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhh
Confidence 467899999999996 666 4332 1 1 24456678899999986433322 2 23334444455555432
Q ss_pred HHcCC------CceEEEEccc
Q 019555 113 IQLGI------NDIVVAGGME 127 (339)
Q Consensus 113 I~sG~------~~~vLv~g~e 127 (339)
++.|. .|.+|++|+-
T Consensus 354 ~~~g~~~~G~~~d~vll~~fG 374 (393)
T 3ov2_A 354 AVEGRSTTGDGLQWGVLLGFG 374 (393)
T ss_dssp HHTTCSBTTTTCSEEEEEEEE
T ss_pred hhcCCcCCCCCCCeEEEEEEC
Confidence 33453 2677776553
No 133
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=53.18 E-value=6.9 Score=36.23 Aligned_cols=25 Identities=12% Similarity=-0.105 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
...++++++|+++|+++++||.++.
T Consensus 208 ~~~~~~~~~L~~agl~~~did~~~~ 232 (396)
T 1xpm_A 208 SFQQSWNEYAKRQGKSLADFASLCF 232 (396)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 3678899999999999999999885
No 134
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=51.46 E-value=15 Score=34.35 Aligned_cols=100 Identities=19% Similarity=0.150 Sum_probs=52.4
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCC-Ccce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPN-SVVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~-~~~~ 92 (339)
+.|.|.+.+--+.... .++. ..+-..+++++||+++|+++++||.+.. ..++...+ ..-...+...+|... ..+.
T Consensus 279 a~I~g~~~~~dg~~~~-~p~~-~~~~~~~ai~~Al~~Agl~p~dId~ve~-HgtgT~~~D~~E~~al~~~fg~~~~~~~v 355 (437)
T 2gqd_A 279 AEIVGYGTTGDAYHIT-APAP-EGEGGSRAMQAAMDDAGIEPKDVQYLNA-HGTSTPVGDLNEVKAIKNTFGEAAKHLKV 355 (437)
T ss_dssp EEEEEEEEEECCSCSS-SCCG-GGHHHHHHHHHHHHHHTCCGGGCCEEEC-CCCSCHHHHHHHHHHHHHHHGGGGTSCEE
T ss_pred EEEEEEEecCCCCCCC-CCCC-CHHHHHHHHHHHHHHcCCCHhhCCEEEE-ECCCCcCcCHHHHHHHHHHHhccCCCcee
Confidence 4566666544333211 1111 1245678999999999999999998874 22221100 011122333344311 1222
Q ss_pred ee----e-cccCccHHHHHHHHHHHHHcCC
Q 019555 93 TT----I-NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 93 ~~----v-~~~cas~~~al~~A~~~I~sG~ 117 (339)
-. + ...++++...+..+...++.|.
T Consensus 356 ~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ 385 (437)
T 2gqd_A 356 SSTKSMTGHLLGATGGIEAIFSALSIKDSK 385 (437)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred ecchhhhcCChhhhhHHHHHHHHHHHhcCC
Confidence 11 1 1235677777777777887764
No 135
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=50.92 E-value=9.6 Score=34.31 Aligned_cols=29 Identities=21% Similarity=0.123 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEee
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNV 67 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~ 67 (339)
+....+++++|+++|+++++||.|.++..
T Consensus 49 ~~l~~~i~~~L~~agi~~~did~Ia~~~G 77 (330)
T 2ivn_A 49 RLMKPLLRKALSEAGVSLDDIDVIAFSQG 77 (330)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEECC
Confidence 45667899999999999999999987643
No 136
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=50.57 E-value=14 Score=34.72 Aligned_cols=100 Identities=13% Similarity=0.099 Sum_probs=52.7
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCC-Ccce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPN-SVVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~-~~~~ 92 (339)
+.|.|.+.+--+.... .++. ..+-..+++++||+++|+++++||.+.. ..++...+ ..-...+...+|... ..+.
T Consensus 279 a~I~g~~~~~d~~~~t-~p~~-~~~~~~~ai~~Al~~Agl~p~dId~ve~-HgtgT~~gD~~E~~al~~~fg~~~~~~~v 355 (438)
T 2iwz_A 279 AEVLGYGLSGDAGHIT-APDP-EGEGALRCMAAALKDAGVQPEEISYINA-HATSTPLGDAAENKAIKHLFKDHAYALAV 355 (438)
T ss_dssp EEEEEEEEEECCSCSS-SCCT-TCHHHHHHHHHHHHHHTCCGGGCCEEEC-CCCSCHHHHHHHHHHHHHHHGGGGGTSEE
T ss_pred EEEecceecCCCCCCC-CCCC-CHHHHHHHHHHHHHHcCCCHHHcCEEEe-cCCCCcccCHHHHHHHHHHHhccCCCcce
Confidence 4466666544333211 1111 1245678999999999999999998874 22211100 011122333344311 1222
Q ss_pred eee-----cccCccHHHHHHHHHHHHHcCC
Q 019555 93 TTI-----NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 93 ~~v-----~~~cas~~~al~~A~~~I~sG~ 117 (339)
-.+ ...++++...+..+...++.|.
T Consensus 356 ~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ 385 (438)
T 2iwz_A 356 SSTKGATGHLLGAAGAVEAAFTTLACYYQK 385 (438)
T ss_dssp ECCHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred ecchhhhcCCHHHHHHHHHHHHHHHHhcCc
Confidence 111 1235677777788888888773
No 137
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=49.10 E-value=9.5 Score=36.10 Aligned_cols=25 Identities=8% Similarity=0.110 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHcCCCCCCCcEEEee
Q 019555 304 PSLAIPKAIANAGLEASQIDYYEIN 328 (339)
Q Consensus 304 ~~~a~~~al~~agl~~~DId~~~~h 328 (339)
.+.|++++|+++|++++|||++.+=
T Consensus 58 a~~Aa~~al~~a~i~~~~Id~ii~a 82 (460)
T 2wya_A 58 CLTVVQRLMERIQLPWDSVGRLEVG 82 (460)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 3689999999999999999998764
No 138
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=48.94 E-value=17 Score=34.48 Aligned_cols=46 Identities=13% Similarity=-0.031 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHH-------cCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCc
Q 019555 39 KLGSIAIECALKR-------ANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (339)
Q Consensus 39 ~L~~~A~~~Al~d-------agl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~ 90 (339)
+...++++++|++ +|+++++||.+ + .+ .+..+-..+..+||++++.
T Consensus 293 ~~v~~~i~~~L~~~g~~L~~agl~~~DId~~-~---Hq--an~rIl~~v~~~Lgl~~ek 345 (465)
T 3e1h_A 293 ASLQPTYADLLSSLQDQLPSSYQKPADFDWA-M---HP--GGATILSGAESAMGLTPEH 345 (465)
T ss_dssp HHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-E---CC--SSHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHhccccccccCCCHHHceEE-e---cC--CChHHHHHHHHHhCcCHHH
Confidence 4445667777777 57899999833 2 12 2456677889999998543
No 139
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=48.70 E-value=17 Score=33.71 Aligned_cols=100 Identities=18% Similarity=0.103 Sum_probs=53.4
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCC-Ccce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPN-SVVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~-~~~~ 92 (339)
+.|.|.+.+--++... .++. ..+-..+++++||+++|+++++||.+.. ..++...+ ..-...+...+|... ..+.
T Consensus 259 a~I~g~~~~~d~~~~~-~p~~-~~~~~~~ai~~al~~agl~~~dId~ve~-Hgtgt~~~D~~E~~al~~~~g~~~~~~~v 335 (416)
T 1e5m_A 259 GEMVGYAMTCDAYHIT-APVP-DGRGATRAIAWALKDSGLKPEMVSYINA-HGTSTPANDVTETRAIKQALGNHAYNIAV 335 (416)
T ss_dssp EEEEEEEEEECCSCSS-SCCT-TCHHHHHHHHHHHHHHTCCGGGCCEEEC-CCCSCHHHHHHHHHHHHHHHGGGGGGSEE
T ss_pred EEEEEEEEccCCCCCC-CCCC-CHHHHHHHHHHHHHHcCCCHhHCCEEEE-ECCCCcCcCHHHHHHHHHHHcccCCCCee
Confidence 4566766554443221 1111 1245678999999999999999999874 22221101 111122333344321 1121
Q ss_pred ee----e-cccCccHHHHHHHHHHHHHcCC
Q 019555 93 TT----I-NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 93 ~~----v-~~~cas~~~al~~A~~~I~sG~ 117 (339)
-. + ...++++...+..+...++.|.
T Consensus 336 ~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ 365 (416)
T 1e5m_A 336 SSTKSMTGHLLGGSGGIEAVATVMAIAEDK 365 (416)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTE
T ss_pred eCcchhhcccHHHHHHHHHHHHHHHHhcCC
Confidence 11 1 1235677777788888888774
No 140
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=48.54 E-value=36 Score=31.35 Aligned_cols=81 Identities=12% Similarity=-0.038 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHcCCC-CCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCccee--e-e----cccCccHHHHHHHHHHH
Q 019555 41 GSIAIECALKRANVK-PLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT--T-I----NKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 41 ~~~A~~~Al~dagl~-~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~--~-v----~~~cas~~~al~~A~~~ 112 (339)
..++++++|+++|++ .++| .++ ..+ .+..+-..+...||++++.... . + +.+++|-..+|..+.+.
T Consensus 292 ~~~~i~~~L~~~gl~d~~di-~~v---~Hq--~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~ 365 (402)
T 3awk_A 292 IDKVLAEPLEYVHFPSYNDM-FWA---VHP--GGPAILDQIEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIRKN 365 (402)
T ss_dssp HHHHTHHHHHHTTCCCGGGE-EEE---ECC--SCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCccce-eEE---ECC--CcHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHhh
Confidence 346778899999997 3443 222 111 2445667788999998643322 1 1 34445555566555433
Q ss_pred H-HcC-----C-CceEEEEccc
Q 019555 113 I-QLG-----I-NDIVVAGGME 127 (339)
Q Consensus 113 I-~sG-----~-~~~vLv~g~e 127 (339)
= +.| + .+.+|++|+.
T Consensus 366 g~~~G~~~~g~g~d~vll~~fG 387 (402)
T 3awk_A 366 SEELHLPTTGEGFEWGFVIGFG 387 (402)
T ss_dssp HHHTTCSBTTTTCSEEEEEEEE
T ss_pred ccccCCCcCCCCcceEEEEEec
Confidence 2 444 1 1677776654
No 141
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=47.43 E-value=39 Score=31.05 Aligned_cols=82 Identities=16% Similarity=-0.012 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHcCCC-CCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCccee---ee----cccCccHHHHHHHHHH
Q 019555 40 LGSIAIECALKRANVK-PLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT---TI----NKVCSSGMKAVMLAAQ 111 (339)
Q Consensus 40 L~~~A~~~Al~dagl~-~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~---~v----~~~cas~~~al~~A~~ 111 (339)
...++++++|+++|++ .++| .+++ . + .+..+-..+...||++++.... .+ +.+++|...+|..+.+
T Consensus 283 ~~~~~i~~~L~~~gl~d~~di-~~v~-H--q--~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~ 356 (402)
T 1ee0_A 283 NIENAAEKALSPLGITDWNSV-FWMV-H--P--GGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRK 356 (402)
T ss_dssp HHHHHHHHHHGGGTCCCGGGS-EEEE-C--C--SSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCccccc-eEEE-C--C--CCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCchhhHHHHHHHHHHH
Confidence 3456788899999997 6665 3332 1 1 1345566788999997543322 12 3444555556655543
Q ss_pred HH-HcC-----C-CceEEEEccc
Q 019555 112 SI-QLG-----I-NDIVVAGGME 127 (339)
Q Consensus 112 ~I-~sG-----~-~~~vLv~g~e 127 (339)
.= +.| + .+.+|++|+.
T Consensus 357 ~g~~~G~~~~G~~~d~vll~~fG 379 (402)
T 1ee0_A 357 RSMAEGKSTTGEGLDCGVLFGFG 379 (402)
T ss_dssp HHHHTTCSBTBTTBSEEEEEEEE
T ss_pred hccccCCCCCCCCcceEEEEEec
Confidence 32 444 1 1677776654
No 142
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=47.11 E-value=41 Score=31.13 Aligned_cols=83 Identities=10% Similarity=-0.060 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHcCCC-CCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCccee-----e-e-cccCccHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVK-PLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT-----T-I-NKVCSSGMKAVMLAA 110 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~-~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~-----~-v-~~~cas~~~al~~A~ 110 (339)
+...++++++|+++|++ .++| .+++ . + .+..+-..+...||++++.... . . +.+++|...+|..+.
T Consensus 300 ~~~~~~i~~~L~~~gl~d~~di-~~v~-H--q--~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~ 373 (413)
T 1xes_A 300 ANIENCMVEAFSQFKISDWNKL-FWVV-H--P--GGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTR 373 (413)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGS-EEEE-C--C--SCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCccce-eEEE-C--C--CCHHHHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHH
Confidence 44456788899999997 5565 3222 1 1 2345667788999998543322 1 1 334445555665554
Q ss_pred HHH-HcC-----C-CceEEEEccc
Q 019555 111 QSI-QLG-----I-NDIVVAGGME 127 (339)
Q Consensus 111 ~~I-~sG-----~-~~~vLv~g~e 127 (339)
+.= +.| + .+.+|++|+-
T Consensus 374 ~~g~~~G~~~~G~~~d~vll~~fG 397 (413)
T 1xes_A 374 KASLQNGCSTTGEGLEMGVLFGFG 397 (413)
T ss_dssp HHHHHTTCSBTTTTCSEEEEEEEE
T ss_pred HhccccCCCCCCCCcceEEEEEec
Confidence 332 444 1 2677776543
No 143
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=45.88 E-value=33 Score=31.34 Aligned_cols=83 Identities=12% Similarity=-0.023 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCC-CCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCccee---ee----cccCccHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVK-PLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT---TI----NKVCSSGMKAVMLAA 110 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~-~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~---~v----~~~cas~~~al~~A~ 110 (339)
+...++++++|+++|++ .++| .+++ . + .+..+-..+...||++++.... .+ +.+++|...+|..+.
T Consensus 273 ~~~~~~i~~~L~~~gl~d~~di-~~v~-H--q--~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~ 346 (387)
T 3a5r_A 273 NNIKTCLSDAFTPLNISDWNSL-FWIA-H--P--GGPAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMR 346 (387)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGS-EEEE-C--C--SCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCChhhe-eEEE-C--C--CCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHH
Confidence 33456788999999997 6666 3332 1 1 1345566788899997543222 12 344455555665554
Q ss_pred HHH-HcC-----C-CceEEEEccc
Q 019555 111 QSI-QLG-----I-NDIVVAGGME 127 (339)
Q Consensus 111 ~~I-~sG-----~-~~~vLv~g~e 127 (339)
+.= +.| + .+.+|++|+.
T Consensus 347 ~~g~~~G~~~~G~~~d~vll~~fG 370 (387)
T 3a5r_A 347 KKSLENGQATTGEGLEWGVLFGFG 370 (387)
T ss_dssp HHHHHTTCSBTTTTCSEEEEEEEE
T ss_pred HhccccCCCCCCCCcceEEEEEec
Confidence 332 444 1 1677776654
No 144
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=45.53 E-value=13 Score=35.31 Aligned_cols=29 Identities=10% Similarity=0.061 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHcCCCCCCCcEEEeecccc
Q 019555 304 PSLAIPKAIANAGLEASQIDYYEINEAFS 332 (339)
Q Consensus 304 ~~~a~~~al~~agl~~~DId~~~~hd~F~ 332 (339)
...|++++|+++|++++|||++.+-.+.+
T Consensus 77 a~~Aa~~aL~~agi~~~dId~li~~T~t~ 105 (478)
T 2p8u_A 77 CMTVVQNLMERNNLSYDCIGRLEVGTETI 105 (478)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECSCC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEccCC
Confidence 36899999999999999999998776544
No 145
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=45.35 E-value=14 Score=34.10 Aligned_cols=82 Identities=7% Similarity=-0.019 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHc----CCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceee---ec--ccC--ccHHHHHHH
Q 019555 40 LGSIAIECALKRA----NVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT---IN--KVC--SSGMKAVML 108 (339)
Q Consensus 40 L~~~A~~~Al~da----gl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~---v~--~~c--as~~~al~~ 108 (339)
...++++++|+++ |++ ++|.+.+ ...+ .+..+-..+..+||++++.-..+ +. +.+ +|-..+|..
T Consensus 271 ~~~~~~~~~L~~~~~~~gl~--d~d~~~~-v~Hq--~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~ 345 (387)
T 3oit_A 271 NVERCLLDMFGPLLGGDGGG--GWNDLFW-AVHP--GSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDE 345 (387)
T ss_dssp HHHHHHHHHTGGGCC--------GGGSEE-EECC--CCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccCCCC--cccccEE-EECC--CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHH
Confidence 3345667777788 887 5663322 1111 24566778899999986433322 22 223 333334444
Q ss_pred HHH-HHHcCC----CceEEEEcc
Q 019555 109 AAQ-SIQLGI----NDIVVAGGM 126 (339)
Q Consensus 109 A~~-~I~sG~----~~~vLv~g~ 126 (339)
+.+ .++.|+ .|.+|++|+
T Consensus 346 ~~~~~~~~G~~g~~~d~vll~~f 368 (387)
T 3oit_A 346 LRRQRKEAAAAGEWPELGVMMAF 368 (387)
T ss_dssp HHHC----------CCEEEEEEE
T ss_pred HHHhhhccCCCCCCCCEEEEEEe
Confidence 332 244553 267776654
No 146
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=45.04 E-value=17 Score=33.82 Aligned_cols=76 Identities=16% Similarity=0.148 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCCCcceee----e-cccCccHHHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSVVCTT----I-NKVCSSGMKAVMLAAQS 112 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~~~~~~~----v-~~~cas~~~al~~A~~~ 112 (339)
+-..+++++||+++|+++++||.+.. ..++...+ ..-...+...+|- ..+.-. + ...++++...+..+...
T Consensus 296 ~~~~~ai~~al~~Agl~~~dId~ve~-Hgtgt~~~D~~E~~al~~~~g~--~~~v~s~k~~~GH~~gAaG~~~~i~~~~~ 372 (430)
T 1ox0_A 296 QGAIKAIKLALEEAEISPEQVAYVNA-HGTSTPANEKGESGAIVAVLGK--EVPVSSTKSFTGHLLGAAGAVEAIVTIEA 372 (430)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCCEEC-CCCSCHHHHHHHHHHHHHHHCS--SSEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCHHHcCEEEE-eCCcCcccCHHHHHHHHHHhCC--CceecccccccccchhhHHHHHHHHHHHH
Confidence 45678999999999999999999874 22221111 0111123333432 122211 1 23466777888888888
Q ss_pred HHcCC
Q 019555 113 IQLGI 117 (339)
Q Consensus 113 I~sG~ 117 (339)
++.|.
T Consensus 373 l~~~~ 377 (430)
T 1ox0_A 373 MRHNF 377 (430)
T ss_dssp HHHTE
T ss_pred HhcCc
Confidence 88774
No 147
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=44.95 E-value=19 Score=33.69 Aligned_cols=98 Identities=16% Similarity=0.128 Sum_probs=51.4
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHH--HHHHHHcCCCCCcce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPA--RQAALGAGIPNSVVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~--~~ia~~lgl~~~~~~ 92 (339)
+.|.|.+.+--++... .++. ..+-..+++++||+++|+++++||.+..- .++... .... ..+...+|-. .++.
T Consensus 280 a~I~g~~~~~Dg~~~~-~p~~-~~~~~~~ai~~al~~Agl~~~dId~ve~H-gtgt~~-~D~~E~~al~~~fg~~-~~~v 354 (434)
T 2gp6_A 280 ARIMGASITSDGFHMV-APDP-NGERAGHAITRAIQLAGLAPGDIDHVNAH-ATGTQV-GDLAEGRAINNALGGN-RPAV 354 (434)
T ss_dssp EEEEEEEEEECCSCSS-SCCT-TCHHHHHHHHHHHHHTTCCTTTEEEEECC-CCSCHH-HHHHHHHHHHHHHTTC-CCEE
T ss_pred EEEEEEEEecCCCCCC-CCCC-ChHHHHHHHHHHHHHcCCCHHHcCEEEEe-CCcCcc-chHHHHHHHHHHhccC-CCCc
Confidence 4566665443333211 1111 12456789999999999999999988752 222110 0111 1122223321 0111
Q ss_pred ----eee-cccCccHHHHHHHHHHHHHcCC
Q 019555 93 ----TTI-NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 93 ----~~v-~~~cas~~~al~~A~~~I~sG~ 117 (339)
..+ ...++++...+..+...++.|.
T Consensus 355 ~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ 384 (434)
T 2gp6_A 355 YAPKSALGHSVGAVGAVESILTVLALRDQV 384 (434)
T ss_dssp CCTHHHHCBCTTTHHHHHHHHHHHHHHHSC
T ss_pred ccchhhhcCchhhhHHHHHHHHHHHHhcCc
Confidence 111 1245677777788888888775
No 148
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=44.33 E-value=47 Score=30.71 Aligned_cols=83 Identities=8% Similarity=-0.126 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHcCCC-CCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCccee--e-e----cccCccHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVK-PLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT--T-I----NKVCSSGMKAVMLAA 110 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~-~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~--~-v----~~~cas~~~al~~A~ 110 (339)
+...++++++|+++|++ .++| .+++ . + .+..+-..+...||++++.... . + +.+++|...+|..+.
T Consensus 295 ~~~~~~i~~~L~~~gl~d~~di-~~v~-H--q--~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~ 368 (413)
T 2p0u_A 295 KNIGGFLKDTKNLVGASSWNEL-FWAV-H--P--GGPAILDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRVR 368 (413)
T ss_dssp HHHHHHHHHHHHHTTCCSGGGS-EEEE-C--C--SSHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCccce-EEEE-C--C--CCHHHHHHHHHHhCCCHHHHHHHHHHHHHcCcchhhHHHHHHHHHH
Confidence 44556788999999997 5555 3322 1 1 2345567788999998543222 1 1 344455555665554
Q ss_pred HHH-HcC-----C-CceEEEEccc
Q 019555 111 QSI-QLG-----I-NDIVVAGGME 127 (339)
Q Consensus 111 ~~I-~sG-----~-~~~vLv~g~e 127 (339)
+.= +.| + .+.+|++|+-
T Consensus 369 ~~g~~~G~~~~g~~~d~vll~~fG 392 (413)
T 2p0u_A 369 ERSLESNKSTFGEGSEWGFLIGFG 392 (413)
T ss_dssp HHHHHTTCSBTTTTCSEEEEEEEE
T ss_pred HhccccCCcccCCCcceEEEEEeC
Confidence 332 444 1 1677766543
No 149
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=44.15 E-value=11 Score=36.78 Aligned_cols=28 Identities=29% Similarity=0.333 Sum_probs=24.6
Q ss_pred chHHHHHHHHHHcCCCCCCCcEEEeecc
Q 019555 303 APSLAIPKAIANAGLEASQIDYYEINEA 330 (339)
Q Consensus 303 ~~~~a~~~al~~agl~~~DId~~~~hd~ 330 (339)
-|..|++.+|+++|++++|||.|-.+..
T Consensus 51 fP~~AI~~cL~~AGi~~~DID~Va~~~~ 78 (576)
T 3ven_A 51 APVQAAAFCLAQAGLTVDDLDAVAFGWD 78 (576)
T ss_dssp CCHHHHHHHHHHHTCCGGGCSEEEESSC
T ss_pred CCHHHHHHHHHHcCCCHHHCcEEEEECC
Confidence 4678999999999999999999976654
No 150
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=43.83 E-value=20 Score=33.26 Aligned_cols=26 Identities=19% Similarity=0.141 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
.-..+++++||+++|+++++||.+..
T Consensus 285 ~~~~~ai~~al~~agl~~~dId~ve~ 310 (416)
T 2wge_A 285 VRAGRAMTRSLELAGLSPADIDHVNA 310 (416)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 45678999999999999999998874
No 151
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=43.76 E-value=14 Score=32.98 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=23.7
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
..|++++|+++|++++|||.+-+-.+.
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~ 83 (321)
T 3il6_A 57 HQVAKQLLEKSGKQASEIDFILVATVT 83 (321)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCC
Confidence 689999999999999999998776554
No 152
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=43.54 E-value=23 Score=33.00 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCC---CCcceee----e-cccCccHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIP---NSVVCTT----I-NKVCSSGMKAVMLA 109 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~---~~~~~~~----v-~~~cas~~~al~~A 109 (339)
+-..+++++||+++|+++++||.+.. ..++...+ ..-...+...++.. ...+... + ...++++...+..+
T Consensus 294 ~~~~~ai~~al~~agl~~~dId~ve~-HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~ 372 (431)
T 2ix4_A 294 KGAVLAMTRALRQSGLCPNQIDYVNA-HATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFS 372 (431)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEC-CCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEE-eCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHH
Confidence 45678999999999999999998774 22221101 11111222222210 0112111 1 12356777777888
Q ss_pred HHHHHcC
Q 019555 110 AQSIQLG 116 (339)
Q Consensus 110 ~~~I~sG 116 (339)
...++.|
T Consensus 373 ~l~l~~~ 379 (431)
T 2ix4_A 373 ILAIHHG 379 (431)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 8888877
No 153
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=43.33 E-value=42 Score=30.64 Aligned_cols=83 Identities=13% Similarity=-0.041 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHcCCC-CCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCccee---ee----cccCccHHHHHHHHH
Q 019555 39 KLGSIAIECALKRANVK-PLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT---TI----NKVCSSGMKAVMLAA 110 (339)
Q Consensus 39 ~L~~~A~~~Al~dagl~-~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~---~v----~~~cas~~~al~~A~ 110 (339)
+...++++++|+++|++ .++| .++. . + .+..+-..+...||++++.... .+ +.+++|-..+|..+.
T Consensus 277 ~~~~~~i~~~L~~~gl~d~~di-~~v~-H--q--~~~~i~~~~~~~lgl~~ek~~~~~~~l~~~GNtssAsi~~~L~~~~ 350 (389)
T 1i88_A 277 KNITKALVEAFEPLGISDYNSI-FWIA-H--P--GGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR 350 (389)
T ss_dssp HHHHHHHHHHHGGGTCCCTTSS-EEEE-C--C--SCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchhhc-eEEE-C--C--CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence 33456778899999997 5555 3322 1 1 2345566788899997543222 12 344455555665554
Q ss_pred HHH-HcC-----C-CceEEEEccc
Q 019555 111 QSI-QLG-----I-NDIVVAGGME 127 (339)
Q Consensus 111 ~~I-~sG-----~-~~~vLv~g~e 127 (339)
+.= +.| + .+.+|++|+.
T Consensus 351 ~~g~~~G~~~~g~~~d~vll~~fG 374 (389)
T 1i88_A 351 KKSTQNGLKTTGEGLEWGVLFGFG 374 (389)
T ss_dssp HHHHHTTCSBTTTTCSEEEEEEEE
T ss_pred HhccccCCcccCCCCceEEEEEec
Confidence 332 444 1 1677776654
No 154
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=42.03 E-value=15 Score=33.77 Aligned_cols=27 Identities=30% Similarity=0.144 Sum_probs=23.2
Q ss_pred HHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 305 SLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 305 ~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
..|+++||+++|++++|||++-+-.+.
T Consensus 86 ~~Aa~~aL~~ag~~~~dId~li~~t~t 112 (379)
T 3euo_A 86 VEASRKAMAEARLVPAQITHMVSTTCT 112 (379)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecC
Confidence 579999999999999999998765543
No 155
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=39.55 E-value=15 Score=33.92 Aligned_cols=88 Identities=9% Similarity=0.021 Sum_probs=50.4
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHH--HHHcCCCCCcce
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQA--ALGAGIPNSVVC 92 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~i--a~~lgl~~~~~~ 92 (339)
+.|+|.+.+.... +.. ..-...|+++||+++|++++|||.+-+- . ......+ .+.||+.+ .+.
T Consensus 276 a~i~g~~~~~~~p------~~~-~~~~~~a~~~al~~Agl~~~dId~ve~h---~----~ft~~~l~~~~~lg~~~-~~v 340 (393)
T 1afw_A 276 GRYIDFQTVGVPP------EIM-GVGPAYAIPKVLEATGLQVQDIDIFEIN---E----AFAAQALYCIHKLGIDL-NKV 340 (393)
T ss_dssp EEEEEEEEEECCG------GGG-GGHHHHHHHHHHHHHTCCGGGCSEEEEC---C----SBHHHHHHHHHHHTCCG-GGB
T ss_pred EEEEEEEEeccCh------hhc-chhHHHHHHHHHHHcCCCHHHCCEEEEe---c----cCHHHHHHHHHHhCCCC-cCc
Confidence 5677776554321 111 1234789999999999999999988742 1 1112222 24477742 121
Q ss_pred e------ee-cccCccHHHHHHHHHHHHHcCC
Q 019555 93 T------TI-NKVCSSGMKAVMLAAQSIQLGI 117 (339)
Q Consensus 93 ~------~v-~~~cas~~~al~~A~~~I~sG~ 117 (339)
. .+ ...+++|...+..+...++.+.
T Consensus 341 n~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~ 372 (393)
T 1afw_A 341 NPRGGAIALGHPLGCTGARQVATILRELKKDQ 372 (393)
T ss_dssp STTCCHHHHCBCTTTHHHHHHHHHHHHSCTTC
T ss_pred CCCCChhhcCCchhhHHHHHHHHHHHHHhhcC
Confidence 1 11 1234566777777777777653
No 156
>2g0c_A ATP-dependent RNA helicase DBPA; RNA recognition motif, hydrolase; 1.70A {Bacillus subtilis} PDB: 3moj_B
Probab=38.71 E-value=11 Score=25.66 Aligned_cols=33 Identities=15% Similarity=0.045 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHcCCCCCCCcEEEeecccccccc
Q 019555 304 PSLAIPKAIANAGLEASQIDYYEINEAFSVRNH 336 (339)
Q Consensus 304 ~~~a~~~al~~agl~~~DId~~~~hd~F~~~~l 336 (339)
|..-....-.++|++.+||.-++++|-||...+
T Consensus 15 p~~ivg~i~~~~gi~~~~IG~I~i~d~~s~v~v 47 (76)
T 2g0c_A 15 AVDFVGTIAKIDGVSADDIGIITIMDNASYVEI 47 (76)
T ss_dssp CHHHHHHHHTSTTCCGGGEEEEEECSSCEEEEE
T ss_pred HHHHHHHHHHccCCChhhccEEEEeCCcEEEEE
Confidence 444555566678999999999999999998765
No 157
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=36.03 E-value=1.3e+02 Score=23.56 Aligned_cols=50 Identities=16% Similarity=0.139 Sum_probs=33.2
Q ss_pred HHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec
Q 019555 44 AIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN 96 (339)
Q Consensus 44 A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~ 96 (339)
-..+.+++-+++++||-.+++. ++.+....+++..+- .+|+. .+|.+...
T Consensus 56 Ll~eii~~N~l~~eDIvSv~FT-vT~DL~A~FPA~aaR-~~Gw~-~VPLmc~q 105 (148)
T 1xho_A 56 LLKEMAEKNGLEEDDIISIIFT-VTKDLDAAFPAIAAR-NMGWT-STALMCMN 105 (148)
T ss_dssp HHHHHHHHTTCCGGGEEEEEEE-ECTTCCSSCTHHHHH-HTTCT-TSEEEEEE
T ss_pred HHHHHHHHcCCCHHHEEEEEEE-eCCccCccChHHHHH-HcCCC-ccchhhcc
Confidence 3344566679999999999984 566655555554443 45987 57877653
No 158
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=33.17 E-value=65 Score=29.88 Aligned_cols=43 Identities=9% Similarity=-0.065 Sum_probs=31.1
Q ss_pred HHHHHHHHHHH------HcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcC--CCCCc
Q 019555 40 LGSIAIECALK------RANVKPLLVQEVFFGNVLSANLGQAPARQAALGAG--IPNSV 90 (339)
Q Consensus 40 L~~~A~~~Al~------dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lg--l~~~~ 90 (339)
-..++++++|+ ++|++ ||.++.=. .+..+-..+...|| ++++.
T Consensus 308 ~~~~~i~~~L~~~~~~~~~gl~---id~~v~Hq-----~~~~il~~v~~~Lg~~l~~ek 358 (413)
T 3v7i_A 308 ETVTAMWEWLRVRYEDDPSSWH---PDVLLAHP-----GGTRVLEYMEQTMPDEWPSGL 358 (413)
T ss_dssp HHHHHHHHHHHHHTSSSCTTCC---CCEEEEEC-----SSHHHHHHHHHHSCSSCCSCS
T ss_pred HHHHHHHHHHhhccccccCCCc---eeEEEECC-----CChHHHHHHHHHhCCCCCHHH
Confidence 35678889999 88887 88766421 24456678899999 98653
No 159
>3ho6_A Toxin A; inositol phosphate, enterotoxin; HET: IHP; 1.60A {Clostridium difficile}
Probab=32.86 E-value=1.1e+02 Score=26.49 Aligned_cols=56 Identities=16% Similarity=0.218 Sum_probs=40.3
Q ss_pred ceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCC--CCCccCeEEEEeecCCCC
Q 019555 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANV--KPLLVQEVFFGNVLSANL 72 (339)
Q Consensus 14 ~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl--~~~~Id~i~~g~~~~~~~ 72 (339)
+.-+||.|+..+ ....+.+.++.+|+.. .++.+++.++ .|+.|...++||.+....
T Consensus 107 RWqlVGHGr~e~--n~~tlaG~sa~~LA~~-L~~f~~~~~~~~~P~~I~~sLvGCsL~s~~ 164 (267)
T 3ho6_A 107 KVTFIGHGKDEF--NTSEFARLSVDSLSNE-ISSFLDTIKLDISPKNVEVNLLGCNMFSYD 164 (267)
T ss_dssp EEEEECCCCSSC--CSSCBTTBCHHHHHHH-HHHHHHHHTTTCCCSEEEEEEESSSCCCTT
T ss_pred EEEEEeCCCCCC--CccccCCCCHHHHHHH-HHHHHHHhhccCCCCcceeeeEeeecCCCC
Confidence 466799999843 2345677899999764 5556767664 578888888999887653
No 160
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=32.48 E-value=19 Score=33.50 Aligned_cols=24 Identities=25% Similarity=0.153 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHcCCCCCccCeEEE
Q 019555 41 GSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 41 ~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
...|+++||+++|++++|||.+-+
T Consensus 315 ~~~a~~~al~~Agl~~~dId~vE~ 338 (418)
T 2iik_A 315 PAYAIPVALQKAGLTVSDVDIFEI 338 (418)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCeeee
Confidence 356999999999999999998764
No 161
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=28.32 E-value=59 Score=29.29 Aligned_cols=41 Identities=17% Similarity=0.014 Sum_probs=29.7
Q ss_pred ceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEE
Q 019555 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (339)
Q Consensus 14 ~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~ 64 (339)
+..++|+|. |+ +.+. +...++++++|+++|++++.|+.+..
T Consensus 208 ~~lvvGIGc----rr-----g~~~-~~i~~ai~~aL~~~~l~~~~v~~ias 248 (336)
T 3eeq_A 208 LKISIGIGS----KK-----DVKM-EEIRDGIYKVLERLNLKRERIGIIAS 248 (336)
T ss_dssp CEEEEEEEE----CS-----SCCH-HHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred CeEEEEEec----CC-----CCCH-HHHHHHHHHHHHHcCCCHHHhhEEEc
Confidence 345677664 22 2444 55688999999999999999887763
No 162
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=26.97 E-value=1.8e+02 Score=22.17 Aligned_cols=51 Identities=18% Similarity=0.190 Sum_probs=33.7
Q ss_pred HHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHc-CCCCCcceeeec
Q 019555 43 IAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGA-GIPNSVVCTTIN 96 (339)
Q Consensus 43 ~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~l-gl~~~~~~~~v~ 96 (339)
+-..+.++.-+++++||-.+++. ++.+....+++..+- .+ |+. .+|.+...
T Consensus 26 eLl~~i~~~N~l~~~dIvSv~FT-~T~DL~a~FPA~aaR-~~~gw~-~VpL~c~q 77 (127)
T 1dbf_A 26 QLLEKIIEENHTKPEDVVQMLLS-ATPDLHAVFPAKAVR-ELSGWQ-YVPVTCMQ 77 (127)
T ss_dssp HHHHHHHHHHCCCGGGEEEEEEE-ECTTCCSSCTHHHHH-TSTTCT-TSCEEEEE
T ss_pred HHHHHHHHHcCCCHHHEEEEEEE-eCCccCccChHHHHh-ccCCCC-ccchhhcc
Confidence 33445566679999999999984 566655555554443 45 887 57877653
No 163
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=26.31 E-value=38 Score=32.98 Aligned_cols=27 Identities=22% Similarity=0.118 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHcCCCCCccCeEEEEe
Q 019555 40 LGSIAIECALKRANVKPLLVQEVFFGN 66 (339)
Q Consensus 40 L~~~A~~~Al~dagl~~~~Id~i~~g~ 66 (339)
+-..|++.+|+.+|++++|||.|.+..
T Consensus 51 fP~~AI~~cL~~AGi~~~DID~Va~~~ 77 (576)
T 3ven_A 51 APVQAAAFCLAQAGLTVDDLDAVAFGW 77 (576)
T ss_dssp CCHHHHHHHHHHHTCCGGGCSEEEESS
T ss_pred CCHHHHHHHHHHcCCCHHHCcEEEEEC
Confidence 345678999999999999999999754
No 164
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=26.19 E-value=89 Score=24.70 Aligned_cols=59 Identities=17% Similarity=0.126 Sum_probs=35.5
Q ss_pred CceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCC
Q 019555 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP 87 (339)
Q Consensus 13 ~~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~ 87 (339)
..++++|+|. |+ +.+. +...++++++|+++|+. |+.+..-..- ..-..-..++..+|++
T Consensus 8 ~~~lvvGIGc----rr-----g~~~-~~i~~ai~~aL~~~gl~---v~~lATid~K---~dE~gL~e~A~~lgvP 66 (155)
T 3by5_A 8 AMVTVAGIGC----RK-----GAAS-DAIIAAVRAAERAFGVT---VDYLATAPLK---ADEAGLAEAAKGLSLS 66 (155)
T ss_dssp --CEEEEEEE----CS-----SCCH-HHHHHHHHHHHHHHTCC---CCEEEESSCC---SCCHHHHHHHHHTTCC
T ss_pred CCEEEEEEcc----CC-----CCCH-HHHHHHHHHHHHHCCCC---eEEEEchhhh---CCCHHHHHHHHHhCCC
Confidence 3468899886 23 2344 44578999999999997 6655432111 1222335677888774
No 165
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=26.16 E-value=2e+02 Score=21.69 Aligned_cols=50 Identities=18% Similarity=0.167 Sum_probs=33.5
Q ss_pred HHHHHHHHcCCCC-CccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeec
Q 019555 44 AIECALKRANVKP-LLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN 96 (339)
Q Consensus 44 A~~~Al~dagl~~-~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~ 96 (339)
-..+.++.-++++ +||-.+++. ++++.....++..+- .+|+. .+|.+...
T Consensus 26 Ll~~i~~~N~l~~~~divSv~FT-~T~DL~a~FPA~aaR-~~g~~-~VpL~c~q 76 (122)
T 1ufy_A 26 LLLKMLEANGIQSYEELAAVIFT-VTEDLTSAFPAEAAR-QIGMH-RVPLLSAR 76 (122)
T ss_dssp HHHHHHHHHTCCCGGGEEEEEEE-ECTTCCSCCHHHHHH-HTTGG-GSCEEEEE
T ss_pred HHHHHHHhcCCCChHhEEEEEEE-eCCccCccChHHHHH-HcCCC-ccchhhcc
Confidence 3344566679999 999999984 566665555554444 45887 57877653
No 166
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=25.85 E-value=91 Score=36.17 Aligned_cols=101 Identities=12% Similarity=0.073 Sum_probs=60.2
Q ss_pred eEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcCCCCCccCeEEEEeecCCCCC-CcHHHHHHHHcCCCCCccee
Q 019555 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSVVCT 93 (339)
Q Consensus 15 v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dagl~~~~Id~i~~g~~~~~~~~-~~~~~~ia~~lgl~~~~~~~ 93 (339)
..|.|.+.+--++....... ...+-..+++++||++||++|++||+|-. ..++...+ +.=..-|...+|-....| .
T Consensus 244 a~i~g~~~n~dg~~~~~~t~-P~~~~q~~~i~~al~~ag~~p~~i~yvea-HGTgT~~gD~~E~~al~~~f~~~~~~~-~ 320 (2512)
T 2vz8_A 244 ATILNAGTNTDGSKEQGVTF-PSGDVQEQLIRSLYAPAGPDPESLEYIEA-HGTGTKVGDPQELNGIVNALCATRREP-L 320 (2512)
T ss_dssp EEEEEEEEEECCCCTTCSSS-CCHHHHHHHHHTTSGGGSSCTTSCCEEEC-CCCCCTTHHHHHHHHHHHHHCSCSSSC-C
T ss_pred EEEEEEEEcCCCCCCCCCCC-CCHHHHHHHHHHHHHHcCCCHHHCCEEEe-ecCCCCCCCHHHHHHHHHHhcccCCCC-c
Confidence 45777776666643211111 12455678899999999999999998763 33333221 122233445555321111 1
Q ss_pred ee--------cccCccHHHHHHHHHHHHHcCCC
Q 019555 94 TI--------NKVCSSGMKAVMLAAQSIQLGIN 118 (339)
Q Consensus 94 ~v--------~~~cas~~~al~~A~~~I~sG~~ 118 (339)
.+ ...+++|...+..+..+++.|..
T Consensus 321 ~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~i 353 (2512)
T 2vz8_A 321 LIGSTKSNMGHPEPASGVAALIKVLLSLEHGVW 353 (2512)
T ss_dssp EEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBC
T ss_pred eeecccccccccccccchhHHHHHHHHHHCCCc
Confidence 11 23578899999999999998853
No 167
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=25.21 E-value=98 Score=30.49 Aligned_cols=66 Identities=14% Similarity=0.125 Sum_probs=42.9
Q ss_pred CCHHHHHHHHHHH----HHHHcCCCCCccCeEEEEeecCCCCCCcHHHHHHHHcCCCCCcceeeecccCccHHH
Q 019555 35 VSATKLGSIAIEC----ALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMK 104 (339)
Q Consensus 35 ~~~~~L~~~A~~~----Al~dagl~~~~Id~i~~g~~~~~~~~~~~~~~ia~~lgl~~~~~~~~v~~~cas~~~ 104 (339)
....+++..|++. +|+.+|++.++||.++++-..+ ..+...-+..+||-|..+.-.+...+++++.
T Consensus 507 Ir~~qlAKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG----~~l~~~~a~~iGllP~~~~~ki~~vGN~sl~ 576 (631)
T 3zyy_X 507 IQNLIRAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFG----KYLNIKDAITIGLLPDIDINKFSYVGNSSLK 576 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSC----SEEEHHHHHHHTSSCCSCGGGEEECSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHccEEEEecccc----ccCCHHHHhhcCCCCCccccCEEEECcHHHH
Confidence 4445666666554 4788999999999999875544 3334455677888655665555555555543
No 168
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=23.65 E-value=41 Score=31.51 Aligned_cols=28 Identities=14% Similarity=0.185 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHcCCCCCCCcEEEeeccc
Q 019555 304 PSLAIPKAIANAGLEASQIDYYEINEAF 331 (339)
Q Consensus 304 ~~~a~~~al~~agl~~~DId~~~~hd~F 331 (339)
...|++++|+++|++++|||.+.+-.+.
T Consensus 56 a~~Aa~~aL~~agi~~~~Id~li~~t~t 83 (450)
T 2f82_A 56 SFNAVTSLLEKYKIDPKQIGRLEVGSET 83 (450)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECCC
T ss_pred HHHHHHHHHHHcCcCHHHCCEEEEEecC
Confidence 3689999999999999999999866543
No 169
>3pa8_A Toxin B; CLAN CD cysteine protease, protease, toxin-peptide in complex; HET: 621 IHP; 2.00A {Clostridium difficile} PDB: 3pee_B*
Probab=23.60 E-value=98 Score=26.45 Aligned_cols=55 Identities=15% Similarity=0.267 Sum_probs=37.9
Q ss_pred ceEEEeeccCcccccCCCCCCCCHHHHHHHHHHHHHHHcC--CCCCccCeEEEEeecCCC
Q 019555 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRAN--VKPLLVQEVFFGNVLSAN 71 (339)
Q Consensus 14 ~v~IvG~~~t~~~~~~~~~~~~~~~~L~~~A~~~Al~dag--l~~~~Id~i~~g~~~~~~ 71 (339)
+.-+||.|+..+ ....+.+.++.+|+.+ +++.+++.+ +.|+.|.-.++||.+-+.
T Consensus 104 RwqlVGHGr~e~--n~~~fag~sadeLa~~-L~~f~~~~~~~~~pK~i~IsLvGCsL~s~ 160 (254)
T 3pa8_A 104 KLTFIGHGKDEF--NTDIFAGFDVDSLSTE-IEAAIDLAKEDISPKSIEINLLGCNMFSY 160 (254)
T ss_dssp EEEEECCCCSSC--CSSEETTEEHHHHHHH-HHHHHHHHTTTCCCSEEEEEEESSSCCCT
T ss_pred EEEEEecCcCCC--CcceeccCCHHHHHHH-HHHHHHHHhhccCCCCceEEEEeecccCC
Confidence 467899999766 2345667899999764 556666654 456666667788776654
No 170
>3onr_A Protein transport protein SECE2; calcium dodecin, calcium binding protein, dodecamer, imuuno antigen, metal binding protein; 1.80A {Mycobacterium tuberculosis}
Probab=23.26 E-value=35 Score=23.32 Aligned_cols=27 Identities=19% Similarity=0.091 Sum_probs=23.8
Q ss_pred chHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 303 APSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 303 ~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
+...|++.++++|.-+..+|+.+|+-+
T Consensus 17 S~edAi~nAi~~AskTl~ni~~~eV~e 43 (72)
T 3onr_A 17 SWEQAAAEAVQRARDSVDDIRVARVIE 43 (72)
T ss_dssp CHHHHHHHHHHHHHHHCSCCCEEEEEE
T ss_pred CHHHHHHHHHHHHHhcccCCeEEEEEE
Confidence 456899999999999999999999865
No 171
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=22.36 E-value=39 Score=30.31 Aligned_cols=25 Identities=20% Similarity=0.310 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHcCCCCCCCcEEEee
Q 019555 304 PSLAIPKAIANAGLEASQIDYYEIN 328 (339)
Q Consensus 304 ~~~a~~~al~~agl~~~DId~~~~h 328 (339)
+.++++.+|+++|++++|||.|-+.
T Consensus 56 l~~~i~~~L~~ag~~~~did~Iav~ 80 (334)
T 3eno_A 56 IDTVISRALEKAKISIHDIDLIGFS 80 (334)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 3579999999999999999999654
No 172
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=21.80 E-value=39 Score=32.79 Aligned_cols=33 Identities=30% Similarity=0.282 Sum_probs=29.2
Q ss_pred cchHHHHHHHHHHcCCCCCCCcEEEeecccccc
Q 019555 302 TAPSLAIPKAIANAGLEASQIDYYEINEAFSVR 334 (339)
Q Consensus 302 ~~~~~a~~~al~~agl~~~DId~~~~hd~F~~~ 334 (339)
.+...+.+++++++|++.+|+|++.++++-|..
T Consensus 48 ~g~~~~l~~~~~~~~~~~~~~~lir~nea~pvi 80 (610)
T 2d0o_A 48 FGIQEALALVARGAGIAVSDISLIRINEATPVI 80 (610)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEEEECCSEE
T ss_pred HHHHHHHHHHHHHcCCChhhceeeeecccCccc
Confidence 355789999999999999999999999987754
No 173
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=21.75 E-value=43 Score=28.30 Aligned_cols=25 Identities=16% Similarity=0.209 Sum_probs=22.0
Q ss_pred chHHHHHHHHHHcCCCCCCCcEEEe
Q 019555 303 APSLAIPKAIANAGLEASQIDYYEI 327 (339)
Q Consensus 303 ~~~~a~~~al~~agl~~~DId~~~~ 327 (339)
...+.++.+|+++|++++|||.|-+
T Consensus 37 ~l~~~i~~~L~~a~~~~~did~Iav 61 (231)
T 2gel_A 37 RILPMVQEILAASGASLNEIDALAF 61 (231)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 3568999999999999999999854
No 174
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=21.45 E-value=52 Score=29.36 Aligned_cols=22 Identities=27% Similarity=0.424 Sum_probs=20.1
Q ss_pred HHHHHHHHHcCCCCCCCcEEEe
Q 019555 306 LAIPKAIANAGLEASQIDYYEI 327 (339)
Q Consensus 306 ~a~~~al~~agl~~~DId~~~~ 327 (339)
++++.+|+++|++++|||.+-+
T Consensus 53 ~~i~~~L~~agi~~~did~Ia~ 74 (330)
T 2ivn_A 53 PLLRKALSEAGVSLDDIDVIAF 74 (330)
T ss_dssp HHHHHHHHHHTCCTTTCCEEEE
T ss_pred HHHHHHHHHcCCCHHHCcEEEE
Confidence 6899999999999999999854
No 175
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=21.16 E-value=55 Score=27.39 Aligned_cols=24 Identities=17% Similarity=0.268 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHcCCCCCCCcEEEe
Q 019555 304 PSLAIPKAIANAGLEASQIDYYEI 327 (339)
Q Consensus 304 ~~~a~~~al~~agl~~~DId~~~~ 327 (339)
..+.++++|+++|++++|||.|-+
T Consensus 39 L~p~i~~~L~~a~~~~~dld~Iav 62 (213)
T 3r6m_A 39 VLPMVDEVLKEAGLTLQDLDALAF 62 (213)
T ss_dssp HHHHHHHHHHTTTCCTTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCHHHccEEEE
Confidence 357999999999999999999843
No 176
>2ux9_A Dodecin; flavoprotein; HET: FMN COA; 1.4A {Thermus thermophilus} SCOP: d.230.2.1 PDB: 2cz8_A* 2deg_A 2deh_A 2dev_A 2v21_A* 2v18_A* 2vyx_A* 2v19_A*
Probab=20.89 E-value=34 Score=23.18 Aligned_cols=27 Identities=30% Similarity=0.466 Sum_probs=23.8
Q ss_pred chHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 303 APSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 303 ~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
+...|++.++++|.-+..+|+.+|+-+
T Consensus 17 S~edAi~nAi~~AskTl~ni~~~eV~e 43 (69)
T 2ux9_A 17 GLEAAIQAALARARKTLRHLDWFEVKE 43 (69)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcccCCeEEEEEE
Confidence 456899999999999999999999865
No 177
>2cc6_A VNG1446H, dodecin; flavoprotein, flavin, flavin-like ligands; HET: LUM; 1.27A {Halobacterium salinarum} SCOP: d.230.2.1 PDB: 2cc7_A* 2cc8_A* 2cc9_A 2ccb_A* 2ccc_A* 2cif_A* 2cjc_A* 1mog_A* 2vx9_A* 2cie_A* 2vkf_A* 2vkg_A*
Probab=20.85 E-value=33 Score=23.15 Aligned_cols=27 Identities=19% Similarity=0.153 Sum_probs=23.8
Q ss_pred chHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 303 APSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 303 ~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
+...|++.++++|.-+..+|+.+|+-+
T Consensus 15 S~edAi~nAi~~AskTl~ni~~~eV~e 41 (68)
T 2cc6_A 15 SFTAAADDAIDRAEDTLDNVVWAEVVD 41 (68)
T ss_dssp CHHHHHHHHHHHHHHHCSCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcccCCeEEEEEE
Confidence 456899999999999999999999865
No 178
>2yiz_A Dodecin; flavoprotein, flavin binding protein, protein-engineering, P storage protein; HET: COA FMN GOL; 1.70A {Mycobacterium tuberculosis} PDB: 3oqt_A 2yj0_A*
Probab=20.27 E-value=35 Score=23.10 Aligned_cols=27 Identities=22% Similarity=0.415 Sum_probs=23.8
Q ss_pred chHHHHHHHHHHcCCCCCCCcEEEeec
Q 019555 303 APSLAIPKAIANAGLEASQIDYYEINE 329 (339)
Q Consensus 303 ~~~~a~~~al~~agl~~~DId~~~~hd 329 (339)
+...|++.++++|.-+..+|+.+|+-+
T Consensus 17 S~edAi~nAi~~AskTl~ni~~~eV~e 43 (69)
T 2yiz_A 17 GVDAAIQGGLARAAQTMRALDWFEVQS 43 (69)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcccCCeEEEEEE
Confidence 456899999999999999999999865
Done!