RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 019555
(339 letters)
>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase.
Length = 394
Score = 609 bits (1571), Expect = 0.0
Identities = 269/322 (83%), Positives = 300/322 (93%), Gaps = 1/322 (0%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
RDVCIVGVARTP+GGFLGSLSS+SAT+LGSIAI+ AL+RA V P LVQEVFFGNVLSANL
Sbjct: 1 RDVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANL 60
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQAPARQAALGAG+P S +CTT+NKVC+SGMKAVMLAAQSIQLGIND+VVAGGMESMSNA
Sbjct: 61 GQAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNA 120
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
PKYL EARKGSRLGHDT+VDGMLKDGLWDVYNDFGMGVCAE+CA++++I+R+EQD+YAI+
Sbjct: 121 PKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQ 180
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE-GG 251
S++R IAAQ +G FAWEI PVE+ GRG+P +IVDKDEGL KFD AKL KLRPSFKE GG
Sbjct: 181 SYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGG 240
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
SVTAGNAS ISDGAAALVLVSG KALELGLQVIAKIRG+ADAAQAPE FTTAP+LAIPKA
Sbjct: 241 SVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKA 300
Query: 312 IANAGLEASQIDYYEINEAFSV 333
+ +AGLEASQ+DYYEINEAFSV
Sbjct: 301 LKHAGLEASQVDYYEINEAFSV 322
>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze
the reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and eukaryotes (cytosol,
microbodies and mitochondria). There are 2 functional
different classes: thiolase-I (3-ketoacyl-CoA thiolase)
and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I
can cleave longer fatty acid molecules and plays an
important role in the beta-oxidative degradation of
fatty acids. Thiolase-II has a high substrate
specificity. Although it can cleave acetoacyl-CoA, its
main function is the synthesis of acetoacyl-CoA from two
molecules of acetyl-CoA, which gives it importance in
several biosynthetic pathways.
Length = 386
Score = 407 bits (1048), Expect = e-142
Identities = 167/318 (52%), Positives = 213/318 (66%), Gaps = 4/318 (1%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV RTP+G F G+L VSA LG+ I+ L+RA + P V +V GNVL A GQ P
Sbjct: 2 IVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNP 61
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
ARQAAL AG+P SV TT+N+VC SG++AV LAAQSI G D+VVAGG+ESMS AP L
Sbjct: 62 ARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLL 121
Query: 137 AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196
+AR+G RLG +T+ DGML DGL D + MG+ AE A K+ I+R+EQD +A+RS +R
Sbjct: 122 PKARRGGRLGLNTL-DGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSHQR 180
Query: 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSFKEGGSVTA 255
AAQ +G F EI PVE+ +G ++VD+DEG KL KL+P+FK+ G+VTA
Sbjct: 181 AAAAQEAGRFKDEIVPVEVPGRKGP--VVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTA 238
Query: 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANA 315
GNAS I+DGAAA++L+S KA ELGL+ +A+I G+A A P P AIPKA+ A
Sbjct: 239 GNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRA 298
Query: 316 GLEASQIDYYEINEAFSV 333
GL ID EINEAF+
Sbjct: 299 GLTLDDIDLIEINEAFAA 316
>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional.
Length = 393
Score = 389 bits (1002), Expect = e-135
Identities = 163/321 (50%), Positives = 208/321 (64%), Gaps = 4/321 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV ARTP+G F G+L VSA +LG+I I+ AL+RA V P V EV G VL A
Sbjct: 2 KDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA 61
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQAAL AG+P V TINKVC SG+KAV LAAQ+I+ G DIVVAGG ESMS A
Sbjct: 62 GQNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQA 121
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P L +R G ++G +VD M+ DGL D +N + MG+ AE A ++ ITR+EQD +A+
Sbjct: 122 PHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALA 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKLRPSFKEG 250
S ++ AA +G F EI PV + +G P ++VD DE + D A L KLRP+F +
Sbjct: 182 SQQKAEAAIKAGRFKDEIVPVTIKQRKGDP-VVVDTDEHP-RPDTTAESLAKLRPAFDKD 239
Query: 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPK 310
G+VTAGNAS I+DGAAA+V++S KA ELGL +A+I +A A P P AI K
Sbjct: 240 GTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRK 299
Query: 311 AIANAGLEASQIDYYEINEAF 331
A+ AG + +D EINEAF
Sbjct: 300 ALEKAGWSLADLDLIEINEAF 320
>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases. This
model represents a large family of enzymes which
catalyze the thiolysis of a linear fatty acid CoA (or
acetoacetyl-CoA) using a second CoA molecule to produce
acetyl-CoA and a CoA-ester product two carbons shorter
(or, alternatively, the condensation of two molecules of
acetyl-CoA to produce acetoacetyl-CoA and CoA). This
enzyme is also known as "thiolase", "3-ketoacyl-CoA
thiolase", "beta-ketothiolase" and "Fatty oxidation
complex beta subunit". When catalyzing the degradative
reaction on fatty acids the corresponding EC number is
2.3.1.16. The condensation reaction corresponds to
2.3.1.9. Note that the enzymes which catalyze the
condensation are generally not involved in fatty acid
biosynthesis, which is carried out by a decarboxylating
condensation of acetyl and malonyl esters of acyl
carrier proteins. Rather, this activity may produce
acetoacetyl-CoA for pathways such as IPP biosynthesis in
the absence of sufficient fatty acid oxidation [Fatty
acid and phospholipid metabolism, Other].
Length = 386
Score = 340 bits (874), Expect = e-116
Identities = 156/319 (48%), Positives = 201/319 (63%), Gaps = 4/319 (1%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV ARTP+G F GSL VSA LG+ I+ L+R + P L+ +V FGNVL A Q
Sbjct: 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNI 60
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
ARQAAL AG+P SV T+N+ C+SG++AV+LAAQ I+ G D+VVAGG+ESMS P +
Sbjct: 61 ARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSV 120
Query: 137 -AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195
R G + G+ + D +LKDGL D N MG+ AE A K+ I+R+EQD YA+RS +
Sbjct: 121 PRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGISREEQDEYALRSHQ 180
Query: 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSFKEGGSVT 254
R A GLF EI PV S K ++V DEG+ KL KL+P+F G+VT
Sbjct: 181 RAAKAWEEGLFKDEIVPV--SVKGRKGPVVVSSDEGIRPNTTLEKLAKLKPAFDPNGTVT 238
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
AGN+S ++DGAAAL+L+S KA ELGL +A+I +A A PE P AIPKA+
Sbjct: 239 AGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDPEIMGLGPVPAIPKALKK 298
Query: 315 AGLEASQIDYYEINEAFSV 333
AGL S ID +EINEAF+
Sbjct: 299 AGLSISDIDLFEINEAFAA 317
>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 262
Score = 324 bits (832), Expect = e-111
Identities = 150/261 (57%), Positives = 187/261 (71%), Gaps = 3/261 (1%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
DV IV ARTP+G F GSL +SA LG+IAI+ AL+RA VKP V EV GNVL A G
Sbjct: 1 DVVIVSAARTPIGSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEG 60
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
Q PARQAAL AGIP+SV TINKVC SG+KAV LAAQ+I+ G DIVVAGG+ESMSNAP
Sbjct: 61 QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESMSNAP 120
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
L +R G+R+G +VD MLKDGL D +N MG+ AE A K+ I+R+EQD +A+RS
Sbjct: 121 YVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISREEQDEFALRS 180
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF-KEGG 251
++ AAQ +G F EI PV + +GKP ++VDKDEG+ L KL+P+F KE G
Sbjct: 181 QQKAAAAQKAGKFKDEIVPVTIKGRKGKP-LVVDKDEGIRPGTTLESLAKLKPAFDKENG 239
Query: 252 SVTAGNASIISDGAAALVLVS 272
+VTAGNAS ++DGAAA++L+S
Sbjct: 240 TVTAGNASGLNDGAAAVLLMS 260
>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 319 bits (819), Expect = e-107
Identities = 147/319 (46%), Positives = 191/319 (59%), Gaps = 4/319 (1%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV ARTP G F GSL V AT+LG IAI+ AL+RANV V+EV G VL GQ P
Sbjct: 6 IVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIP 65
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
+RQAA AGIP V T+NKVC+SG++AV LA Q I+ G ++VAGGMESMSNAP L
Sbjct: 66 SRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYIL 125
Query: 137 AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196
AR G R+G + ++D M+ DGL ++ MGV A + I+R+ QD +A RS +R
Sbjct: 126 PGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYRSHQR 185
Query: 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA--KLMKLRPSFKEGGSVT 254
++A G F EI PV + +G P I+V KDE K D KL KL+P F + G++T
Sbjct: 186 AVSAHEEGRFEEEIVPVTIPQRKGDP-IVVAKDEAPRK-DTTIEKLAKLKPVFDKTGTIT 243
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
AGNA ++DGAAALVL+S +A + G + +A I A + F P AI +
Sbjct: 244 AGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEK 303
Query: 315 AGLEASQIDYYEINEAFSV 333
G ID +EINEAF+
Sbjct: 304 TGKTVEDIDLFEINEAFAA 322
>gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional.
Length = 397
Score = 317 bits (814), Expect = e-107
Identities = 158/327 (48%), Positives = 211/327 (64%), Gaps = 5/327 (1%)
Query: 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL 68
++ + I ARTPM F G +S++A +LG+ AI A++RA +KP + EV G VL
Sbjct: 3 AVDQDPIVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVL 62
Query: 69 SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
A GQAPARQAALGAG+P SV CTT+NK+C SGM+A M A + G D++VAGGMES
Sbjct: 63 PAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMES 122
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG--MGVCAEICANKHTITRDEQ 186
M+NAP L +AR G R+GH ++D M DGL D Y D G MG AE CA ++ TR+ Q
Sbjct: 123 MTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAY-DKGRLMGTFAEECAGEYGFTREAQ 181
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
D++AI S R A G FAWEIAPV ++ +G ++D+DE K + K+ L+P+
Sbjct: 182 DAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGD--TVIDRDEQPFKANPEKIPTLKPA 239
Query: 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL 306
F + G+VTA N+S ISDGAAALV++ A LGL +A++ G + AQAP FTTAP
Sbjct: 240 FSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVG 299
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSV 333
AI K G A+++D +EINEAF+V
Sbjct: 300 AIRKLFEKNGWRAAEVDLFEINEAFAV 326
>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 282 bits (724), Expect = 3e-93
Identities = 142/322 (44%), Positives = 205/322 (63%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV RT +G F GSL+++ A +LG+ I L++ + P V EV G VL+A
Sbjct: 2 QDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA 61
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQAA+ AG+P+SV T+NKVC SG+KA+ LAAQ+I+ G ++++AGG E+MS A
Sbjct: 62 GQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLA 121
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P L AR G R+GH +VD M+ DGLWD +ND+ MG+ AE K+ I+R+ QD++A
Sbjct: 122 PYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAA 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGS 252
S ++ +AA +G F EI P+ + +G+P ++ A L KL+P+FK+ GS
Sbjct: 182 SQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGS 241
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTAGNAS ++DGAAA++L+S KA LGL V+AKI +A+A P P A + +
Sbjct: 242 VTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCL 301
Query: 313 ANAGLEASQIDYYEINEAFSVR 334
AG +++D E NEAF+ +
Sbjct: 302 DKAGWSLAELDLIEANEAFAAQ 323
>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism].
Length = 392
Score = 258 bits (662), Expect = 6e-84
Identities = 140/331 (42%), Positives = 189/331 (57%), Gaps = 24/331 (7%)
Query: 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKR--ANVKPLLVQEVFFGNVLS 69
RDV IVG RTP G F GSL+ ++A LG+ I+ L+R A+V V +V G VL
Sbjct: 2 RDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQ 61
Query: 70 A-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
A GQ ARQAAL AG+P SV T+N+ C+SG+ AV LAAQ+I G D+V+AGG+E
Sbjct: 62 AGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEK 121
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
MS+AP R+G R+ D+ VD M +D L D + MG+ AE A ++ I+R++QD
Sbjct: 122 MSDAPMG----REGVRVL-DSAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDE 176
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA----KLMKLR 244
A++S K A +G F EI P ++ + V D + D + L
Sbjct: 177 VAVKSHKNAAANPKAGFF-DEITPEDVLNSP------VVADPLR-RLDCSPTSDGAAALV 228
Query: 245 PSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTA 303
P+F+E GG+VTAGNAS I+DGAAAL+L+S KA ELGL +A IR +A A P
Sbjct: 229 PAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DG 287
Query: 304 PSLAIPKAIANAGLEA-SQIDYYEINEAFSV 333
P A+ A+ AGL A + E EAF+
Sbjct: 288 PVAAVHDALTIAGLLALEDLGLAEKGEAFAA 318
>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional.
Length = 394
Score = 251 bits (644), Expect = 3e-81
Identities = 133/323 (41%), Positives = 187/323 (57%), Gaps = 6/323 (1%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN 71
R+V +V RT +G F GSL V+ T LG+ + AL RA V P V V FG+V+
Sbjct: 2 MREVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTE 61
Query: 72 LGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
+R AA+ AG+P +N++C SG++A++ AAQ+I LG D+ + GG ESMS
Sbjct: 62 PRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMS 121
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
AP L AR G+R+G +VD M+ L D + MGV AE A K+ I+R+ QD+ A
Sbjct: 122 RAPYLLPAARWGARMGDAKLVDMMV-GALHDPFGTIHMGVTAENVAAKYGISREAQDALA 180
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE-KFDAAKLMKLRPSF-K 248
+ S +R AA +G F +I PVE+ + +G+ ++ D DE + L KL+P F K
Sbjct: 181 LESHRRAAAAIAAGYFKDQIVPVEIKTRKGE--VVFDTDEHVRADTTLEDLAKLKPVFKK 238
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
E G+VTAGNAS I+DGAAA+VL A GL+ +A++ G+A A PE+ P A
Sbjct: 239 ENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPAT 298
Query: 309 PKAIANAGLEASQIDYYEINEAF 331
KA+ AGL + +D E NEAF
Sbjct: 299 QKALERAGLTVADLDVIEANEAF 321
>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional.
Length = 388
Score = 243 bits (621), Expect = 5e-78
Identities = 143/328 (43%), Positives = 189/328 (57%), Gaps = 20/328 (6%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV RT +G F S S + A +LG AI+ + A + P LVQEV GNV+ A +
Sbjct: 2 KDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV 61
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PA QAA AG+P V T+N VC+SGM AV AA+ I LG D+V+AGGME+MSNA
Sbjct: 62 GQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNA 121
Query: 133 PKYL-AEARKGSR-LGHDT--IVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
P L ++ R G + L H I D ML DGL D + MGV AE A K+ ITR+ D
Sbjct: 122 PFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITREMADE 181
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248
Y+++S++R I A SG F EI P +D+DEG+ K L KL P+F
Sbjct: 182 YSVQSYERAIRATESGEFRNEIVPFND----------LDRDEGIRKTTMEDLAKLPPAFD 231
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
+ G +TAGN++ +SDG +ALV+ S E GL+ IA+I G+ A+ P F AP A
Sbjct: 232 KNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPAT 291
Query: 309 PKAIANAGLEASQIDYYEI---NEAFSV 333
K + IDYY++ NEAFS+
Sbjct: 292 RKLLEKQN---KSIDYYDLVEHNEAFSI 316
>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional.
Length = 404
Score = 226 bits (579), Expect = 2e-71
Identities = 128/331 (38%), Positives = 177/331 (53%), Gaps = 17/331 (5%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
RD I RTP+G F G+ V A +L + I ++R + P + +V FG N
Sbjct: 2 RDAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQG-YPN- 59
Query: 73 GQAPA--RQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G+APA R AAL AG+P +V +++ C SG++AV+ AA +Q G D+V+AGG ESMS
Sbjct: 60 GEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMS 119
Query: 131 NAPKYLAEARKGSRLG----HDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
N Y + R G R G HD + G G GM AE ++ I+R+EQ
Sbjct: 120 NVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGISREEQ 179
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEG------LEKFDAAKL 240
D+ A+RS +R +AAQ +G F EI PV + +G P +VD+DE LE AKL
Sbjct: 180 DALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDP-TVVDRDEHPRADTTLESL--AKL 236
Query: 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300
+ +VTAGNAS +D AAA ++ + KA ELGL+ +A++ +A A P
Sbjct: 237 RPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRM 296
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAF 331
P A KA+A AGL ID E+NEAF
Sbjct: 297 GIGPVPATEKALARAGLTLDDIDLIELNEAF 327
>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 215 bits (548), Expect = 5e-67
Identities = 131/324 (40%), Positives = 191/324 (58%), Gaps = 4/324 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+ V I RT G F+GSLS+ A L + I+ L+ + + P LV EV G V++
Sbjct: 3 KPVYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGS 62
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQ + AGIP V TINKVC SG+K+V LAA SI G N+IV+AGG E+MS
Sbjct: 63 GQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLG 122
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
+ + R G++ G +VD M DGL DV++ MG+ AE + + I+R EQD +A+
Sbjct: 123 -MHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQEQDEFALS 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLM-KLRPSFKEGG 251
S K+ AQ +G+F EI P+E++ + + D DE + + +++ KLRP+F + G
Sbjct: 182 SHKKAAKAQLAGIFKDEILPIEVTIKKTTS--LFDHDETVRPDTSLEILSKLRPAFDKNG 239
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
VTAGNAS I+DGAA L++VS + L +A+I +A A P TAP A KA
Sbjct: 240 VVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKA 299
Query: 312 IANAGLEASQIDYYEINEAFSVRN 335
++ AG + ++ E+NEAF+ ++
Sbjct: 300 LSKAGWSVNDLEVIEVNEAFAAQS 323
>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated.
Length = 401
Score = 214 bits (548), Expect = 9e-67
Identities = 134/340 (39%), Positives = 186/340 (54%), Gaps = 36/340 (10%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSAN 71
+ I RTP+G + G+LSSV A LG++ ++ + R V V +V +G AN
Sbjct: 2 TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYG---CAN 58
Query: 72 LGQAP------ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
QA AR +AL AG+P SV TTIN++C SGM AV AA++I+ G ++++AGG
Sbjct: 59 --QAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGG 116
Query: 126 MESMSNAPKYLAEARKG-SRLG--HDT-----IVDGMLKDGLWDVYNDFGMGVCAEICAN 177
+ESMS AP + +A SR DT V+ ++K Y M AE A
Sbjct: 117 VESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKA----QYGVDSMPETAENVAE 172
Query: 178 KHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDE------G 231
+ I+R +QD++A+RS +R AAQ +G A EI PV + +G P ++VD+DE
Sbjct: 173 DYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDP-VVVDRDEHPRPETT 231
Query: 232 LEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA 291
LE L KL+P F+ G+VTAGNAS ++DGAAAL+L S A + GL A+I G A
Sbjct: 232 LEA-----LAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMA 286
Query: 292 DAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331
A P P+ A K +A GL Q D E+NEAF
Sbjct: 287 TAGVEPRIMGIGPAPATRKLLARLGLTIDQFDVIELNEAF 326
>gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional.
Length = 391
Score = 204 bits (522), Expect = 5e-63
Identities = 129/330 (39%), Positives = 180/330 (54%), Gaps = 22/330 (6%)
Query: 13 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL-SA 70
R+ IV ARTP+G GSL +V LG++ ++ LKRA + ++ G + A
Sbjct: 2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEA 61
Query: 71 NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G AR AG+P +V TIN+ CSSG++++ A+ I LG ++ V+AGG ESMS
Sbjct: 62 EQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMS 121
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
P +GH + L + + Y GMG AE A K+ I+R++QD++A
Sbjct: 122 LVPM----------MGHVVRPNPRLVEAAPEYY--MGMGHTAEQVAVKYGISREDQDAFA 169
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGR----GKPF---IIVDKDEGLE-KFDAAKLMK 242
+RS +R A G FA EI PV+++ K I +DEG+ L K
Sbjct: 170 VRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGK 229
Query: 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
LRP+F GSVTAGN+S +SDGAAA++L+ KA GL+ +AK R FA A PE
Sbjct: 230 LRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGI 289
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFS 332
P AIPKA+ AGLE S I +E+NEAF+
Sbjct: 290 GPIAAIPKALKLAGLELSDIGLFELNEAFA 319
>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase. Members of this family
are designated beta-ketoadipyl CoA thiolase, an enzyme
that acts at the end of pathways for the degradation of
protocatechuate (from benzoate and related compounds)
and of phenylacetic acid.
Length = 400
Score = 200 bits (511), Expect = 3e-61
Identities = 128/332 (38%), Positives = 185/332 (55%), Gaps = 18/332 (5%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSAN 71
R+ I RTP+G + GSLSSV A L ++ I+ L R + + +V +G AN
Sbjct: 1 REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYG---CAN 57
Query: 72 LGQAP------ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
QA AR AAL AG+P SV TT+N++C SG+ A+ +AA++I+ G D+++AGG
Sbjct: 58 --QAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGG 115
Query: 126 MESMSNAPKYLAEAR----KGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181
+ESMS AP + +A + +++ TI + + +Y M AE A + I
Sbjct: 116 VESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENVAEEFGI 175
Query: 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAK-L 240
+R++QD++A+RS +R AAQ SG FA EI PV + +G+P +VD+DE + L
Sbjct: 176 SREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEP-TVVDQDEHPRPETTLEGL 234
Query: 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300
KL+P + G+VTAGNAS ++DGAAAL+L S GL A+I A A P
Sbjct: 235 AKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIM 294
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFS 332
P A K +A AGL Q D E+NEAF+
Sbjct: 295 GIGPVPATQKLLARAGLSIDQFDVIELNEAFA 326
>gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase.
Length = 452
Score = 191 bits (488), Expect = 2e-57
Identities = 115/333 (34%), Positives = 172/333 (51%), Gaps = 28/333 (8%)
Query: 12 ARDVCIVGVARTPM-----GGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
DV IV RTP+ GGF + L + ++ +++ + P V ++ G
Sbjct: 45 GDDVVIVAAYRTPICKAKRGGFKDTY----PDDLLAPVLKAVVEKTGLNPSEVGDIVVGT 100
Query: 67 VLSANLGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
VL+ +A R AA AG P +V T+N+ CSSG++AV A +I+ G DI + G
Sbjct: 101 VLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAG 160
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185
+ESM+ P E R+ + +D L MG+ +E A + +TR+E
Sbjct: 161 VESMTTNPMAW-EGGVNPRVESFS----QAQDCL------LPMGITSENVAERFGVTREE 209
Query: 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPV-----EMSSGRGKPFIIVDKDEGL-EKFDAAK 239
QD A+ S ++ AA SG F EI PV + +G KP I++ D+G+ A
Sbjct: 210 QDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKP-IVISVDDGIRPNTTLAD 268
Query: 240 LMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
L KL+P FK+ G+ TAGN+S +SDGA A++L+ A++ GL ++ R FA P
Sbjct: 269 LAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAV 328
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFS 332
P++AIP A+ AGLE ID +EINEAF+
Sbjct: 329 MGIGPAVAIPAAVKAAGLELDDIDLFEINEAFA 361
>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional.
Length = 400
Score = 188 bits (480), Expect = 1e-56
Identities = 117/334 (35%), Positives = 183/334 (54%), Gaps = 25/334 (7%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL 72
+ I RTP+G + G+LSSV A LG++ ++ ++R +V + +V +G AN
Sbjct: 3 EAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYG---CAN- 58
Query: 73 GQAP------ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
QA AR + L AG+P+ V +TIN++C SGM AV +AA++I+ G +++AGG+
Sbjct: 59 -QAGEDNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGV 117
Query: 127 ESMSNAPKYLAEAR----KGSRLGHDTI----VDGMLKDGLWDVYNDFGMGVCAEICANK 178
ESMS AP + +A + + + TI V+ ++K +Y M AE A
Sbjct: 118 ESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQ----LYGVDSMPETAENVATD 173
Query: 179 HTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA 238
+ ++R +QD++A+RS ++ AQ G A EI PV + +G P ++V +DE +
Sbjct: 174 YNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDP-LVVSRDEHPRETTLE 232
Query: 239 KLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE 298
L KL+ + G+VTAGNAS ++DGA AL+L S A GL+ A++ G A A P
Sbjct: 233 ALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPR 292
Query: 299 WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFS 332
P+ A K +A G+ Q D E+NEAF+
Sbjct: 293 VMGIGPAPATQKLLARLGMTLDQFDVIELNEAFA 326
>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional.
Length = 399
Score = 188 bits (479), Expect = 1e-56
Identities = 118/331 (35%), Positives = 178/331 (53%), Gaps = 24/331 (7%)
Query: 14 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVL-SA 70
D IV RTP+G G + L + + A+ + + P L+++ G + A
Sbjct: 7 DAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEA 66
Query: 71 NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G AR AL AG+PNSV T+N+ C+SG++AV +AA I++G D+++A G+ESMS
Sbjct: 67 EQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMS 126
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
P +G+ + + +V +GMG+ AE A + ++R++QD++A
Sbjct: 127 MVPM----------MGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFA 176
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGR-----GKPFI---IVDKDEGLEKFDAAK-LM 241
+ S ++ IAAQ +G F EI P E++ G+ + VD DEG + + L
Sbjct: 177 LESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLA 236
Query: 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKAL-ELGLQVIAKIRGFADAAQAPEWF 300
KL+P F GSVTAGN+S SDGA A++LVS KAL + L +A+ FA A PE
Sbjct: 237 KLKPVFANKGSVTAGNSSQTSDGAGAVILVSE-KALKQFNLTPLARFVSFAVAGVPPEIM 295
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAF 331
P AIP A+ AGL+ +D+ E+NEAF
Sbjct: 296 GIGPIEAIPAALKQAGLKQDDLDWIELNEAF 326
>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 185 bits (471), Expect = 2e-55
Identities = 115/336 (34%), Positives = 177/336 (52%), Gaps = 31/336 (9%)
Query: 14 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN- 71
+ IV ARTP+ + G+ + LG ++ A++RA + P V++V G AN
Sbjct: 3 EAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMG---CANP 59
Query: 72 ---LGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
G ARQ AL AG+P +V T+N+ CSSG++ + LAAQ + G D+ VAGG+ES
Sbjct: 60 EGATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVES 119
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
+S + + +G L + ++Y + M AE A ++ I+++ QD
Sbjct: 120 ISCVQN---------EMNRHMLREGWLVEHKPEIY--WSMLQTAENVAKRYGISKERQDE 168
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPF--------IIVDKDEGLEKFDAAK- 239
Y ++S +R AAQ +G F EI P+ +++G + V DEG+ D
Sbjct: 169 YGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRP-DTTLE 227
Query: 240 -LMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE 298
+ K+R + GG +TAGNAS SDGA+A V+++ A GLQ + RGFA A P+
Sbjct: 228 GVSKIRSAL-PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPD 286
Query: 299 WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVR 334
P A+PK + AGL+ ID +E+NEAF+V+
Sbjct: 287 EMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAFAVQ 322
>gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 387
Score = 180 bits (459), Expect = 1e-53
Identities = 121/339 (35%), Positives = 170/339 (50%), Gaps = 49/339 (14%)
Query: 13 RDVCIVGVARTPMG---GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVL 68
DV IV RTPMG G G+ +V A L + + L R + P + ++ +G V
Sbjct: 2 EDVVIVDAIRTPMGRSKG--GAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCV- 58
Query: 69 SANLGQA--PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
L Q AR AAL AGIP+SV T+N++C S M+A+ AA++I G D+ + GG+
Sbjct: 59 QQTLEQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGV 118
Query: 127 ESMSNAP------------KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174
E M + P K +A+A GM MG+ AE+
Sbjct: 119 EHMGHVPMNHGVDFHPGLSKNVAKA------------AGM-------------MGLTAEM 153
Query: 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-E 233
H I+R++QD++A RS +R AA G F EI P E G + D DE +
Sbjct: 154 LGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGV-LKLFDYDEVIRP 212
Query: 234 KFDAAKLMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFAD 292
+ L LRP+F G+VTAG +S +SDGA+A++++S +A ELGL+ A+IR A
Sbjct: 213 ETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAV 272
Query: 293 AAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331
A P P A KA+ AGL S ID +E+NEAF
Sbjct: 273 AGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAF 311
>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional.
Length = 394
Score = 179 bits (455), Expect = 5e-53
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 23/333 (6%)
Query: 13 RDVCIVGVARTPMGGFLGS------LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
DV +V ART F +++ +L ++ I +++ +KP + ++ G
Sbjct: 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGC 61
Query: 67 VLSANLGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
L R A +P ++ +++ C+S + V + A I G+ DIV+AGG
Sbjct: 62 ALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGG 121
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDG---LWDVYNDFGMGVCAEICANKHTIT 182
+E M+ P H +L D +D+ + MG+ AE A + I
Sbjct: 122 VEHMTRTPMGDNP--------HIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIK 173
Query: 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA--KL 240
R+E D +++RS + A G F EI P+E+ K +VD D+ + D + KL
Sbjct: 174 REEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKK--KVVDVDQSVRP-DTSLEKL 230
Query: 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300
KL P+FK G +TAGN+S ++ GA+ ++L+S + GL+ +AKIR F A P
Sbjct: 231 AKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIM 290
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSV 333
P A KA+ AGL ID +EINEAF+V
Sbjct: 291 GKGPVPASKKALEKAGLSVKDIDLWEINEAFAV 323
>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional.
Length = 401
Score = 177 bits (450), Expect = 2e-52
Identities = 117/332 (35%), Positives = 171/332 (51%), Gaps = 33/332 (9%)
Query: 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA-----NLGQAP 76
R+P G G+L+SV L + I L+++ +++V G A N+
Sbjct: 11 RSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNV---- 66
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
AR A L AG+P +V T+N++C+SG+ AV+ AA++I G D+ +AGG+ESMS AP +
Sbjct: 67 ARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVM 126
Query: 137 AEARK-------------GSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183
+A G+R + IV Y + M + A + I+R
Sbjct: 127 GKAESAFSRDAKVFDTTIGARFPNPKIVAQ---------YGNDSMPETGDNVAAEFGISR 177
Query: 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE-KFDAAKLMK 242
++ D +A +S + AA+ G FA EI P+E+ GR P +V +DE L K
Sbjct: 178 EDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTK 237
Query: 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
L+P F EGG VTAGNAS I+DGAAAL++ S + GL+ +A+I A A P
Sbjct: 238 LKPLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGI 296
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVR 334
P AI KA+A AGL +D EINEAF+ +
Sbjct: 297 GPVEAIKKALARAGLTLDDMDIIEINEAFASQ 328
>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional.
Length = 390
Score = 162 bits (411), Expect = 1e-46
Identities = 109/328 (33%), Positives = 168/328 (51%), Gaps = 27/328 (8%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA-NLGQA 75
IV ART G G L+ L + ++ + R+ P L+++V G V
Sbjct: 6 IVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATN 65
Query: 76 PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKY 135
AR A L + +P SV T+I++ C S +A+ AAQ++ G DIV+A G+ESM+ P
Sbjct: 66 VARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMG 125
Query: 136 LAE---ARKGSRLGHDTIVDGMLKDGLWDVYND--FGMGVCAEICANKHTITRDEQDSYA 190
A+ G LGH G+ + Y F AE+ A K+ +++D+ D +A
Sbjct: 126 SPSTLPAKNG--LGH------YKSPGMEERYPGIQFSQFTGAEMMAKKYGLSKDQLDEFA 177
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA----KLMKLRPS 246
++S +R IAA +G F EI P+E++ G + DEG+ +FDA +KL
Sbjct: 178 LQSHQRAIAATQAGKFKAEIVPLEITRADGSG-EMHTVDEGI-RFDATLEGIAGVKL--- 232
Query: 247 FKEGGSVTAGNASIISDGAAALVLVS--GVKALELGLQVIAKIRGFADAAQAPEWFTTAP 304
EGG +TA AS I DGA+ +++V+ G+KA LG++ +A+I P AP
Sbjct: 233 IAEGGRLTAATASQICDGASGVMVVNERGLKA--LGVKPLARIHHMTVIGGDPVIMLEAP 290
Query: 305 SLAIPKAIANAGLEASQIDYYEINEAFS 332
A +A+ AG++ ID YE+NEAF+
Sbjct: 291 LPATERALKKAGMKIDDIDLYEVNEAFA 318
>gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated.
Length = 402
Score = 161 bits (410), Expect = 3e-46
Identities = 114/343 (33%), Positives = 160/343 (46%), Gaps = 55/343 (16%)
Query: 22 RTPMGGFL--GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLS-ANLGQAPAR 78
RTP G GSL V +L + +E R + V +V G V + G AR
Sbjct: 11 RTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIAR 70
Query: 79 QAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE 138
A L AG+P +V IN+ C+SG++AV LAA ++ G +D+V+AGG+ESMS P
Sbjct: 71 TAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPM---- 126
Query: 139 ARKGSRLGHDTIVDGMLKDGLWDVYNDFGM-------GVCAEICANKHTITRDEQDSYAI 191
GS DG G W + G+ A++ A K+ +R++ D+YA+
Sbjct: 127 ---GS--------DG----GAWAMDPSTNFPTYFVPQGISADLIATKYGFSREDVDAYAV 171
Query: 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250
S +R AA G FA + PV+ +G I+D DE + L KL+PSF
Sbjct: 172 ESQQRAAAAWAEGYFAKSVVPVKDQNG----LTILDHDEHMRPGTTMESLAKLKPSFAMM 227
Query: 251 GSV---------------------TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRG 289
G + AGN+S I DGAAA+++ S LGL+ A+I
Sbjct: 228 GEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVA 287
Query: 290 FADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFS 332
A P T P A KA+A AGL ID +E+NEAF+
Sbjct: 288 TATIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLFELNEAFA 330
>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional.
Length = 382
Score = 159 bits (405), Expect = 8e-46
Identities = 111/321 (34%), Positives = 157/321 (48%), Gaps = 21/321 (6%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV RTP+G G L+ V LG+ ++ + R + P V +V FG V QA
Sbjct: 6 IVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCV-DTIGPQAG 64
Query: 77 --ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
AR + L AG+P V T+++ C S +A+ AAQ++ G D+VVAGG+++MS P
Sbjct: 65 NIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIP- 123
Query: 135 YLAEARK-GSRLGHDTIVDGMLKDGLWDVYNDFGMG--VCAEICANKHTITRDEQDSYAI 191
++ A G +LG + G Y D + AE+ A K I+R+E + +A+
Sbjct: 124 -ISSAMTAGEQLGFTSPFAE--SKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFAL 180
Query: 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGG 251
S +R AA +G F EI PV V DEG + K+ L+P EGG
Sbjct: 181 ESHRRAFAAIRAGRFDNEIVPVGG----------VTVDEGPRETSLEKMAGLKP-LVEGG 229
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
+TA AS ISDGA+A++L S GL A+I + P + TAP A A
Sbjct: 230 RLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYA 289
Query: 312 IANAGLEASQIDYYEINEAFS 332
+ GL ID EINEAF+
Sbjct: 290 LEKTGLSIDDIDVVEINEAFA 310
>gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional.
Length = 406
Score = 159 bits (404), Expect = 2e-45
Identities = 115/346 (33%), Positives = 166/346 (47%), Gaps = 46/346 (13%)
Query: 17 IVGVARTPMG-GFLGSLSSVSATKLGSIAIECAL-KRANVKPLLVQEVFFGNVLSA-NLG 73
IV AR+P+G F GSL + L + + AL K + P + ++ G L G
Sbjct: 6 IVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQG 65
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
AR A+ G + TT+N+ CSS ++ +A +I+ G D+ ++ G+E++S
Sbjct: 66 FNMARVVAVLLGYDF-LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFA 124
Query: 134 K------------YLAEARK--------GSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173
K AEA+ G+ HD DG+L D VY MG AE
Sbjct: 125 KGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLLPD----VY--IAMGQTAE 178
Query: 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEG-- 231
A I+R+EQD + +RS R A +G F EI PV + G +V D+G
Sbjct: 179 NVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDG-----TVVSTDDGPR 233
Query: 232 ----LEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKI 287
EK L+P F+ G+VTAGNA ++DGAAA+V++S KA ELGL +A+I
Sbjct: 234 AGTTYEKVSQ-----LKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARI 288
Query: 288 RGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSV 333
+ +PE P A +A+A AG+ ID EINEAF+
Sbjct: 289 VSTGVSGLSPEIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAA 334
>gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA. This
subunit of the FadBA complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit. This protein is almost always located
adjacent to FadB (TIGR02437). The FadBA complex is the
major complex active for beta-oxidation of fatty acids
in E. coli [Fatty acid and phospholipid metabolism,
Degradation].
Length = 385
Score = 158 bits (400), Expect = 4e-45
Identities = 114/326 (34%), Positives = 165/326 (50%), Gaps = 19/326 (5%)
Query: 14 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSA 70
DV IV RTPMG G+ + A L + + L R V P V+++++G V +
Sbjct: 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60
Query: 71 NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G AR AAL A IP++ T+N++C S M+A+ AA++I G D+ + GG+E M
Sbjct: 61 EQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMG 120
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
+ P H GM MG+ AE+ H I+R++QD++A
Sbjct: 121 HVPMMHGVDFHPGMSLHVAKAAGM-------------MGLTAEMLGKMHGISREQQDAFA 167
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE-KFDAAKLMKLRPSFK- 248
RS R AA G F EI P + G D DE + + L LRP+F
Sbjct: 168 ARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQF-DYDEVIRPETTVESLAALRPAFDP 226
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
+ G+VTAG +S +SDGA+A++++S +A ELGL+ A+IR A A P P A
Sbjct: 227 KNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPAT 286
Query: 309 PKAIANAGLEASQIDYYEINEAFSVR 334
KA+ AGL S ID +E+NEAF+ +
Sbjct: 287 QKALKRAGLSISDIDVFELNEAFAAQ 312
>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional.
Length = 426
Score = 157 bits (399), Expect = 2e-44
Identities = 121/346 (34%), Positives = 164/346 (47%), Gaps = 35/346 (10%)
Query: 11 KARDVCIVGVARTPMGGFL---GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNV 67
AR V IV ARTP FL G SA+ L A L R P + EV G
Sbjct: 1 MARPVYIVDGARTP---FLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCA 57
Query: 68 LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
+ + AR AL G V T+ + C+SGM+A+ AA +I LG D+V+AGG+E
Sbjct: 58 MPSPDEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVE 117
Query: 128 SMSNAP--------KYLAE------------ARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167
+MS+AP ++LA A R + V G+L+ GL D
Sbjct: 118 AMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLR-GLTDPVVGLN 176
Query: 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVD 227
MG AE+ A++ ITR++ D+YA RS +R AAQ G E+ P + GK + D
Sbjct: 177 MGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVP--LFDRDGKFY---D 230
Query: 228 KDEGL-EKFDAAKLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIA 285
D+G+ KL KL+P F + G VTAGN+S I+DGA L+L S + GL +
Sbjct: 231 HDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLG 290
Query: 286 KIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331
+I AA P P A + GL +D +EINEAF
Sbjct: 291 RIVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAF 336
>gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional.
Length = 387
Score = 152 bits (385), Expect = 7e-43
Identities = 112/324 (34%), Positives = 155/324 (47%), Gaps = 22/324 (6%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA-NLGQA 75
IV RTP+G G LS + A +L L RA + P V++V G V A
Sbjct: 6 IVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNN 65
Query: 76 PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKY 135
R A L AG+P V TTI+ C S +A L A I G D+ +A G+E+MS P
Sbjct: 66 ITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPL- 124
Query: 136 LAEARKGSRLGHDTIVDGMLKDGLW--DVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
G+ G G+ + W D+ N F AE A + ITR++ D++ +RS
Sbjct: 125 ------GANAGPGR---GLPRPDSWDIDMPNQFE---AAERIAKRRGITREDVDAFGLRS 172
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSG--RGKP---FIIVDKDEGLEKFDAAKLMKLRPSFK 248
+R A G F EI+PV+ G+P +V +D+GL L L+P
Sbjct: 173 QRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVL- 231
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
EGG TAG +S ISDGAAA++ + +A LGL+ A+I A P + P A
Sbjct: 232 EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQAT 291
Query: 309 PKAIANAGLEASQIDYYEINEAFS 332
K + AG++ ID EINEAF+
Sbjct: 292 AKVLEKAGMKIGDIDLVEINEAFA 315
>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 428
Score = 149 bits (379), Expect = 1e-41
Identities = 101/344 (29%), Positives = 166/344 (48%), Gaps = 31/344 (9%)
Query: 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA 70
+ + IV RTP + + A LG + + L R+ + P L++++ FG V+
Sbjct: 3 QGDRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQ- 61
Query: 71 NLGQAP--ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
+ +AP AR+ LG G+ ++++ C++ +AV A+SI G DI +AGG +S
Sbjct: 62 -MPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADS 120
Query: 129 MSNAP----KYLAEA----RKGSRLGHD-TIVDGM-LKD------GLWDVYNDFGMGVCA 172
S P K LA A K LG + + L+D + + MG A
Sbjct: 121 SSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTA 180
Query: 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFI---IVDKD 229
E A + I+R+EQD+ A RS + A G E+ + + +P + D
Sbjct: 181 EQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYK-QPLEEDNNIRGD 239
Query: 230 EGLEKFDAAKLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIR 288
LE + KLRP+F ++ G+VTA N++ ++DGAAA++L+S +A LGL + +R
Sbjct: 240 STLEDYA-----KLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLR 294
Query: 289 GFADAAQAPEW-FTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331
+A AA P+ A P A+ AGL + + +++EAF
Sbjct: 295 SYAFAAIDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHEAF 338
>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional.
Length = 361
Score = 145 bits (368), Expect = 1e-40
Identities = 93/318 (29%), Positives = 149/318 (46%), Gaps = 32/318 (10%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV RTP+G G L +L + + K ++ + +V GNV+ G
Sbjct: 5 IVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFLSK--GMERE-IDDVILGNVVGP--GGNV 59
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
AR +AL AG+ + TI++ C +G++A+ A IQ G +AGG+ES S +P
Sbjct: 60 ARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSP--- 116
Query: 137 AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196
+ +R +TI D MGV AE A ++ ITR+ QD YA S+KR
Sbjct: 117 --FQNRARFSPETI-------------GDPDMGVAAEYVAERYNITREMQDEYACLSYKR 161
Query: 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAG 256
+ A G EI ++D+ E + + +P+F G+VTAG
Sbjct: 162 TLQALEKGYIHEEILSFNG---------LLDESIKKEMNYERIIKRTKPAFLHNGTVTAG 212
Query: 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAG 316
N+ ++DGA A++++ +A +LG + + + A P T P A+ K +
Sbjct: 213 NSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMN 272
Query: 317 LEASQIDYYEINEAFSVR 334
++ IDY+EINEAF+ +
Sbjct: 273 MKVEDIDYFEINEAFASK 290
>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing
enzymes; In general, thiolases catalyze the reversible
thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and
acetyl-CoA, a 2-step reaction involving a covalent
intermediate formed with a catalytic cysteine. There are
2 functional different classes: thiolase-I
(3-ketoacyl-CoA thiolase) and thiolase-II
(acetoacetyl-CoA thiolase). Thiolase-I can cleave longer
fatty acid molecules and plays an important role in the
beta-oxidative degradation of fatty acids. Thiolase-II
has a high substrate specificity. Although it can cleave
acetoacyl-CoA, its main function is the synthesis of
acetoacyl-CoA from two molecules of acetyl-CoA, which
gives it importance in several biosynthetic pathways.
Length = 393
Score = 130 bits (328), Expect = 9e-35
Identities = 96/332 (28%), Positives = 145/332 (43%), Gaps = 50/332 (15%)
Query: 18 VGVARTPMGGFLGSLSSVS---ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ 74
G A T G F G + + A + G+ AI AL+ A V V+E G VL A GQ
Sbjct: 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQ 60
Query: 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
A+QAA+ AG +N +C SG++A+ LA Q I G + ++AGG E M + +
Sbjct: 61 NCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAE 120
Query: 135 YLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194
A + + + N +GM R D++A+
Sbjct: 121 NNA-----------------KEKHIDVLINKYGM--------------RACPDAFALAGQ 149
Query: 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL---MKLRPSFKEGG 251
AA+ G F E A + +G I D DE ++ D A L KLRP+F +
Sbjct: 150 AGAEAAEKDGRFKDEFAKFGVKGRKGD--IHSDADEYIQFGDEASLDEIAKLRPAFDKED 207
Query: 252 SVTAGNASIISDGAAALVLVS-------GVKALELGLQVIAKIRGFADAAQAPEWFT--- 301
+TAGNA ++DGAAA +L+S G+++ +Q + I A + +
Sbjct: 208 FLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVG 267
Query: 302 -TAPSLAIPKAIANAGLEASQIDYYEINEAFS 332
P A KA+ AGL +D E ++AF+
Sbjct: 268 GDGPIEAARKALEKAGLGIGDLDLIEAHDAFA 299
>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI. This
subunit of the FadJI complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit, and YfcY. This protein is almost always
located adjacent to FadJ (TIGR02440). The FadJI complex
is needed for anaerobic beta-oxidation of short-chain
fatty acids in E. coli [Fatty acid and phospholipid
metabolism, Degradation].
Length = 430
Score = 126 bits (317), Expect = 6e-33
Identities = 101/338 (29%), Positives = 159/338 (47%), Gaps = 21/338 (6%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ 74
+ IV RTP + + A LG + + L R+ + P L++++ FG V+
Sbjct: 9 IAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAP 68
Query: 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP- 133
AR+ LG G+ ++ + C++ ++ + A+SI G DI +AGG +S S P
Sbjct: 69 NIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPI 128
Query: 134 ---KYLAEA----RKGSRLGHD-TIVDGM-LKD------GLWDVYNDFGMGVCAEICANK 178
K LA + K LG + + LKD + + MG AE A
Sbjct: 129 GVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMAKT 188
Query: 179 HTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA 238
+ ITR EQD+ A RS A G A E+ K +I D + A
Sbjct: 189 YGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPP--YKQWIAEDNNI-RHNSTLA 245
Query: 239 KLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA-DAAQA 296
KLRP+F ++ GSVTA N++ ++DGAAA++L+ +A ELG++ + IR +A A
Sbjct: 246 GYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDV 305
Query: 297 PEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVR 334
+ PS A P A+ AGL S + +++EAF+ +
Sbjct: 306 WQDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQ 343
>gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional.
Length = 417
Score = 115 bits (289), Expect = 5e-29
Identities = 101/353 (28%), Positives = 153/353 (43%), Gaps = 42/353 (11%)
Query: 14 DVCIVGVARTPMG-GFLG--SLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA 70
+ I+ RTP G G +G +L+ + L + ++ +R + V ++ + S+
Sbjct: 3 EAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWST--SS 60
Query: 71 NLGQAPA---RQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
G+ R AAL AG T+++ C G+ +V LAA I G+ D+V+AGG E
Sbjct: 61 QRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTE 120
Query: 128 SMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187
MS A A + G + G L ++ GVC + A ITR+ D
Sbjct: 121 MMSYTA---AMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATMEGITREALD 177
Query: 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDE-GLEKFDAAKLMKLRPS 246
+ + S +R A G F + PV G + +D +E + A L L+P+
Sbjct: 178 ALGLESQRRAARAIKEGRFDKSLVPVYRDDGS----VALDHEEFPRPQTTAEGLAALKPA 233
Query: 247 FK--------EGGSV------------------TAGNASIISDGAAALVLVSGVKALELG 280
F + G+ AGN+S + DGAAAL+L S A + G
Sbjct: 234 FTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHG 293
Query: 281 LQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSV 333
L+ A+I A+ P AP A K +A AGL ID +EINEAF+V
Sbjct: 294 LKPRARIVAMANMGDDPTLMLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAV 346
>gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional.
Length = 427
Score = 112 bits (283), Expect = 4e-28
Identities = 100/355 (28%), Positives = 156/355 (43%), Gaps = 57/355 (16%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA- 70
R V I+G R P G+ + S + + A++ + R ++ + EV G VL
Sbjct: 6 VRRVAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHS 65
Query: 71 ---NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
NL R+ LG+ + + + C +G++A +L A I LG D +AGG++
Sbjct: 66 RDFNL----TRECVLGSALSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVD 121
Query: 128 SMSNAP--------KYLAEARKG---------------SRLGHDTIVDGMLKDGLWDVYN 164
+ S+AP K L E + L + +G + GL
Sbjct: 122 TTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGL----- 176
Query: 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFI 224
MG A I A + I+R+ QD A S + AA + G F I P F+
Sbjct: 177 --SMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITP----------FL 224
Query: 225 IVDKDEGLEK-FDAAKLMKLRPSF--KEGGSVTAGNASIISDGAAALVLVSGVKALELGL 281
+ +D L KL KL+P F ++TAGN++ ++DGA+ ++L S A E GL
Sbjct: 225 GLTRDNNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGL 284
Query: 282 QVIAKIRGFADAA-----QAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331
V+A + A+ A E AP+ A+P+ +A GL D+YEI+EAF
Sbjct: 285 PVLAYLV-DAETAAVDFVHGKEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAF 338
>gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 123
Score = 62.7 bits (153), Expect = 3e-12
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 281 LQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSV 333
L+ +A+IR +A P P+ AIPKA+ AGL + ID +EINEAF+
Sbjct: 1 LKPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAA 53
>gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol
carrier protein (SCP)-x isoform and related proteins;
SCP-2 has multiple roles in intracellular lipid
circulation and metabolism. The N-terminal presequence
in the SCP-x isoform represents a peroxisomal
3-ketacyl-Coa thiolase specific for branched-chain acyl
CoAs, which is proteolytically cleaved from the sterol
carrier protein.
Length = 375
Score = 60.0 bits (146), Expect = 4e-10
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Query: 18 VGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPA 77
VGV TP G S S +L + A AL A ++P + V GN P
Sbjct: 1 VGVGMTP----FGRRSDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPG 56
Query: 78 RQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
A G+ T + +SG AV AA +I G+ D+V+ G E MS+ P
Sbjct: 57 ALIAEYLGLLGKPA-TRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPT 112
Score = 45.7 bits (109), Expect = 2e-05
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 259 SIISDGAAALVLVSGVKALELGLQVIAKIRGFADAA-----QAPEWFTTAPS--LAIPKA 311
+SDGAAA+VL S +A EL + + I G A+ + F + + LA +A
Sbjct: 202 CPVSDGAAAVVLASEERARELTDRPV-WILGVGAASDTPSLSERDDFLSLDAARLAARRA 260
Query: 312 IANAGLEASQIDYYEINEAFSV 333
AG+ ID E+ + F++
Sbjct: 261 YKMAGITPDDIDVAELYDCFTI 282
>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that
catalyze a (decarboxylating or non-decarboxylating)
Claisen-like condensation reaction. Members are share
strong structural similarity, and are involved in the
synthesis and degradation of fatty acids, and the
production of polyketides, a diverse group of natural
products.
Length = 254
Score = 56.7 bits (137), Expect = 3e-09
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT 94
++A++LG A E A+ A + + V G + A Q A GI +
Sbjct: 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYS 63
Query: 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
+N+ C++G+ A+ LA Q +Q G DIV+AGG E
Sbjct: 64 VNQACATGLTALALAVQQVQNGKADIVLAGGSEE 97
Score = 45.1 bits (107), Expect = 2e-05
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA----DAAQAPEWFTTAPSLAIPK 310
+ DGAAA V+ S AL G A+I A A+ P + A K
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 311 AIANAGLEASQIDYYEINEAFS 332
A+ AGL S IDY E + +
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGT 175
>gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 51.1 bits (123), Expect = 3e-07
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLS--- 69
RDV I+GV +T G L VS L A AL+ A + + ++ GN+ +
Sbjct: 2 RDVAIIGVGQTK----FGELWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLF 57
Query: 70 ---ANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
++ A A L A IP T + C+SG A+ A ++ G D+V+A G+
Sbjct: 58 VSQEHIAALIADYAGL-APIP----ATRVEAACASGGAALRQAYLAVASGEADVVLAAGV 112
Query: 127 ESMSNAP 133
E M++ P
Sbjct: 113 EKMTDVP 119
Score = 40.7 bits (96), Expect = 7e-04
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 258 ASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTT--APSLAIPK 310
S I+DGAAA++L S KA E + I+ A+ + FTT A +A K
Sbjct: 208 CSPITDGAAAVILASEEKAKEYTDTPV-WIKASGQASDTIALHDRKDFTTLDAAVVAAEK 266
Query: 311 AIANAGLEASQIDYYEINEAFSV 333
A AG+E ID E+++ F++
Sbjct: 267 AYKMAGIEPKDIDVAEVHDCFTI 289
>gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional.
Length = 391
Score = 49.9 bits (120), Expect = 8e-07
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 15/121 (12%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
V + GV TP F +S + + A AL A + VQ+ + G V
Sbjct: 1 NKVFVAGVGMTP---FEKPGASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVY---- 53
Query: 73 GQAPARQAAL---G-AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
G + + Q AL G GIP +V +N CS+G A+ LA Q+++ G D +A G E
Sbjct: 54 GDSTSGQRALYEVGMTGIP--IV--NVNNNCSTGSTALFLARQAVRSGAADCALALGFEQ 109
Query: 129 M 129
M
Sbjct: 110 M 110
>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid
metabolism / Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 412
Score = 44.6 bits (106), Expect = 5e-05
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGF---ADAAQ--APEWFTTAPSLAIPKAIAN 314
+I +GA ALVL AL G ++ A+I G+ +DA AP A+ A+A+
Sbjct: 229 VIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALAD 288
Query: 315 AGLEASQIDY 324
AGL IDY
Sbjct: 289 AGLTPEDIDY 298
Score = 34.5 bits (80), Expect = 0.066
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 13/79 (16%)
Query: 51 RANVKPLLVQEVFFGNVLSANLGQAPARQAALGA-GIPNSVVCTTINKVCSSGMKAVMLA 109
R + P LV N+ + N+ G G + V C++G A+ A
Sbjct: 125 RKRISPFLV-PKMLPNLAAGNVAIV------FGLKGPNYTPVTA-----CATGAHAIGDA 172
Query: 110 AQSIQLGINDIVVAGGMES 128
+ I+LG D+V+AGG E+
Sbjct: 173 VRLIRLGKADVVIAGGAEA 191
>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP)
synthase (KAS), type I and II. KASs are responsible for
the elongation steps in fatty acid biosynthesis. KASIII
catalyses the initial condensation and KAS I and II
catalyze further elongation steps by Claisen
condensation of malonyl-acyl carrier protein (ACP) with
acyl-ACP.
Length = 406
Score = 43.3 bits (103), Expect = 1e-04
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 75 APARQAALGAGI--PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131
A Q A+ G+ PN V T C+SG A+ AA+ I+LG D+V+AGG E++
Sbjct: 139 MAAGQVAIRLGLRGPNYTVSTA----CASGAHAIGDAARLIRLGRADVVIAGGAEALIT 193
Score = 43.3 bits (103), Expect = 1e-04
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 17/79 (21%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFA---DAAQAPEWFTTAPS-------LAIP 309
++ +GA LVL S A G ++ A+I G+ DA TAP A+
Sbjct: 228 VLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHI-----TAPDPDGEGAARAMR 282
Query: 310 KAIANAGLEASQIDYYEIN 328
A+A+AGL IDY IN
Sbjct: 283 AALADAGLSPEDIDY--IN 299
>gnl|CDD|164577 CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein synthase 3;
Provisional.
Length = 326
Score = 41.9 bits (98), Expect = 3e-04
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVV 91
SS S TKL + A AL +A++ PL + + +L G A QA +GA V
Sbjct: 47 SSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRA---V 103
Query: 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
I CS + A++ A Q IQ G ++ G +++S
Sbjct: 104 AFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLS 142
>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes;
Family of enzymes that catalyze the formation of a new
carbon-carbon bond by a decarboxylating Claisen-like
condensation reaction. Members are involved in the
synthesis of fatty acids and polyketides, a diverse
group of natural products. Both pathways are an
iterative series of additions of small carbon units,
usually acetate, to a nascent acyl group. There are 2
classes of decarboxylating condensing enzymes, which can
be distinguished by sequence similarity, type of active
site residues and type of primer units (acetyl CoA or
acyl carrier protein (ACP) linked units).
Length = 332
Score = 40.3 bits (94), Expect = 8e-04
Identities = 36/136 (26%), Positives = 50/136 (36%), Gaps = 8/136 (5%)
Query: 199 AAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT---A 255
AA L A +A + +G+ + +E D S E S T A
Sbjct: 94 AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAA 153
Query: 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA-----DAAQAPEWFTTAPSLAIPK 310
+ + DGA ALV+ AL G + A+I G A A + A +
Sbjct: 154 ADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKE 213
Query: 311 AIANAGLEASQIDYYE 326
A+A AGL IDY
Sbjct: 214 ALAVAGLTVWDIDYLV 229
Score = 32.6 bits (74), Expect = 0.25
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESM 129
++ C+ + A+ LAA ++Q G DIV+AGG E +
Sbjct: 86 HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEEL 126
>gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 38.0 bits (89), Expect = 0.005
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 14/84 (16%)
Query: 259 SIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT---------TAPSLAIP 309
S++SDGAAALVL A L V F A ++ P A
Sbjct: 213 SLVSDGAAALVLADAETARALQRAV-----RFRARAHVNDFLPLSRRDPLAFEGPRRAWQ 267
Query: 310 KAIANAGLEASQIDYYEINEAFSV 333
+A+A AG+ + + E ++ F++
Sbjct: 268 RALAQAGVTLDDLSFVETHDCFTI 291
Score = 33.8 bits (78), Expect = 0.13
Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 5/121 (4%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
IVG A TP G L + + L AL A + V +F G+ +
Sbjct: 3 TASIVGWAHTP----FGKLDAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSP 58
Query: 74 QA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
Q PA T + C++G AV A +I+ G IV+ G E M+
Sbjct: 59 QDFPASLVLQADPALRFKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTAT 118
Query: 133 P 133
P
Sbjct: 119 P 119
>gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal
domain. The structure of beta-ketoacyl synthase is
similar to that of the thiolase family (pfam00108) and
also chalcone synthase. The active site of beta-ketoacyl
synthase is located between the N and C-terminal
domains. The N-terminal domain contains most of the
structures involved in dimer formation and also the
active site cysteine.
Length = 243
Score = 37.6 bits (88), Expect = 0.006
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 63 FFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVV 122
+ +V + + LG P+ V T CSS + A+ A +SI+ G D+ +
Sbjct: 138 WMPSVAAGRISYR------LGLRGPSVTVDT----ACSSSLVALHAAVRSIRRGECDLAL 187
Query: 123 AGGMESMSN 131
AGG+E+
Sbjct: 188 AGGVEAPLT 196
>gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional.
Length = 385
Score = 37.5 bits (87), Expect = 0.008
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRG------FADAAQAPEWFT-TAPSLAIP 309
++ ISDG+A + S K EL + I G +A A+ EW A LA
Sbjct: 205 DSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAAR 264
Query: 310 KAIANAGLEASQIDYYEINEAFSV 333
+A A + + I+ +++AF++
Sbjct: 265 QAYNMAKVTPNDIEVATVHDAFTI 288
Score = 33.3 bits (76), Expect = 0.16
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 19/125 (15%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
R V ++GV + G VS +L +I+ AL A V ++ V +
Sbjct: 1 RRVAVIGVGNSK----FGRRDDVSVQELAWESIKEALNDAGVSQTDIELVV--------V 48
Query: 73 GQAPARQAALGAGIPNSVVCTTINKV-------CSSGMKAVMLAAQSIQLGINDIVVAGG 125
G R L + KV C++G+ A + A ++ G+ D+ +A G
Sbjct: 49 GSTAYRGIELYPAPIVAEYSGLTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVG 108
Query: 126 MESMS 130
++ M+
Sbjct: 109 VDKMT 113
>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 411
Score = 37.5 bits (88), Expect = 0.009
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
+I C++G A+ AA+ I G D++VAGG E+
Sbjct: 154 PNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITP 195
Score = 31.7 bits (73), Expect = 0.49
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 17/79 (21%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFA---DAAQAPEWFTTAPS-------LAIP 309
++ +GA LVL A G ++ A++ G+ DA + TAP+ A+
Sbjct: 229 VMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDA-----YHMTAPAPDGEGAARAMK 283
Query: 310 KAIANAGLEASQIDYYEIN 328
A+ +AG+ IDY IN
Sbjct: 284 LALKDAGINPEDIDY--IN 300
>gnl|CDD|181173 PRK07937, PRK07937, lipid-transfer protein; Provisional.
Length = 352
Score = 37.0 bits (86), Expect = 0.009
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 261 ISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW----FTTAPSLAIPKAIANAG 316
I+DGAAA+VL +G +A EL + A I G ++P T +PS A+ A G
Sbjct: 204 ITDGAAAVVLAAGDRAREL-RERPAWITGIEHRIESPSLGARDLTRSPSTALAAEAA-TG 261
Query: 317 LEASQIDYYEINEAFS 332
+A +D E++ F+
Sbjct: 262 GDAGGVDVAELHAPFT 277
>gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 381
Score = 37.0 bits (86), Expect = 0.012
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGF-----ADAAQAPEWFTTAPSLAIPKAIAN 314
++ +G A LVL S A + G ++ +I GF A APE + AI + +A
Sbjct: 207 VLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLAR 266
Query: 315 AGLEASQIDY 324
+GL IDY
Sbjct: 267 SGLTPEDIDY 276
Score = 31.6 bits (72), Expect = 0.51
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 72 LGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
L A AA G V+ C++G+ A+ + IQ G V+AG +E+
Sbjct: 121 LPHQAAIAAARQIGTQGPVLAPM--AACATGLWAIAQGVELIQTGQCQRVIAGAVEA 175
>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II.
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II,
FabF) is involved in the condensation step of fatty acid
biosynthesis in which the malonyl donor group is
decarboxylated and the resulting carbanion used to
attack and extend the acyl group attached to the acyl
carrier protein. Most genomes encoding fatty acid
biosynthesis contain a number of condensing enzymes,
often of all three types: 1, 2 and 3. Synthase 2 is
mechanistically related to synthase 1 (KAS-I, FabB)
containing a number of absolutely conserved catalytic
residues in common. This model is based primarily on
genes which are found in apparent operons with other
essential genes of fatty acid biosynthesis
(GenProp0681). The large gap between the trusted cutoff
and the noise cutoff contains many genes which are not
found adjacent to genes of the fatty acid pathway in
genomes that often also contain a better hit to this
model. These genes may be involved in other processes
such as polyketide biosyntheses. Some genomes contain
more than one above-trusted hit to this model which may
result from recent paralogous expansions. Second hits to
this model which are not next to other fatty acid
biosynthesis genes may be involved in other processes.
FabB sequences should fall well below the noise cutoff
of this model [Fatty acid and phospholipid metabolism,
Biosynthesis].
Length = 407
Score = 36.7 bits (86), Expect = 0.013
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 82 LGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
GA PN V T C++G A+ A + IQ G D+++AGG E+
Sbjct: 148 YGAKGPNHAVVTA----CATGTHAIGDAFRLIQRGDADVMIAGGAEA 190
Score = 36.3 bits (85), Expect = 0.020
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGF---ADA----AQAPEWFTTAPSLAIPKAI 312
++ +GA LVL A G ++ A+I G+ DA A APE + A+ A+
Sbjct: 228 VMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPE--GEGAARAMRAAL 285
Query: 313 ANAGLEASQIDYYEIN 328
+AG+ +DY IN
Sbjct: 286 KDAGINPEDVDY--IN 299
>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty
acids into a large variety of different products, called
polyketides, by successive decarboxylating Claisen
condensations. PKSs can be divided into 2 groups,
modular type I PKSs consisting of one or more large
multifunctional proteins and iterative type II PKSs,
complexes of several monofunctional subunits.
Length = 421
Score = 36.8 bits (86), Expect = 0.015
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFA---DAAQAPEWFTTAPS-----LAIPKA 311
+ +G +VL AL G ++ A IRG A D TAPS I +A
Sbjct: 232 VRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKG---ITAPSGEAQAALIRRA 288
Query: 312 IANAGLEASQIDYYE 326
A AG++ S IDY E
Sbjct: 289 YARAGVDPSDIDYVE 303
Score = 32.1 bits (74), Expect = 0.40
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
T++ CSS + A+ LA QS++ G D+ + GG
Sbjct: 165 TVDTACSSSLVALHLACQSLRSGECDLALVGG 196
>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein
synthase; Validated.
Length = 410
Score = 36.2 bits (84), Expect = 0.023
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFA---DAAQAPEWFTTAPSLAIPKAIANAG 316
I + A+VL S A G + AK+ G++ DA + P+ I A+ AG
Sbjct: 236 IYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAG 295
Query: 317 LEASQIDY 324
L IDY
Sbjct: 296 LGPEDIDY 303
>gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I;
Reviewed.
Length = 392
Score = 35.6 bits (83), Expect = 0.032
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 71 NLGQAPAR--QAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
LG + A +A LG P TI+ CSS K A + ++ G+ D + GG++S
Sbjct: 135 ELG-SLADFLRAYLGLSGP----AYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS 189
Query: 129 MS 130
+
Sbjct: 190 LC 191
Score = 31.0 bits (71), Expect = 0.99
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Query: 306 LAIPKAIANAGLEASQIDYYEIN 328
LA+ +A+A+AGL + I Y IN
Sbjct: 264 LAMQQALADAGLAPADIGY--IN 284
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins
[Secondary metabolites biosynthesis, transport, and
catabolism].
Length = 1061
Score = 35.5 bits (82), Expect = 0.038
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKG 142
T++ CSS + AV LA QS++LG D+ +AGG+ + + + G
Sbjct: 168 VTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGG 217
Score = 33.2 bits (76), Expect = 0.25
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 262 SDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL-----AIPKAIANAG 316
+GA +VL A G ++ A IRG A TAP+L I +A+A+AG
Sbjct: 238 GEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAG 297
Query: 317 LEASQIDYYE 326
++ + + Y E
Sbjct: 298 IDPATVQYVE 307
>gnl|CDD|180434 PRK06158, PRK06158, thiolase; Provisional.
Length = 384
Score = 35.4 bits (82), Expect = 0.039
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 260 IISDGAAALVLVSGVKALELGLQVI-----AKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
+++DGA A+V+V +A +L + A + P+ TA + + P+A A
Sbjct: 207 LVTDGAGAVVMVRADRARDLPRPPVYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAM 266
Query: 315 AGLEASQIDYYEINEAFSV 333
AGL + ID E+ +AF++
Sbjct: 267 AGLTPADIDVVELYDAFTI 285
>gnl|CDD|180433 PRK06157, PRK06157, acetyl-CoA acetyltransferase; Validated.
Length = 398
Score = 35.0 bits (81), Expect = 0.054
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Query: 261 ISDGAAALVLVSGVKALELGLQVIAKIRGFADAA------QAPEW-FTTAPSLAIP--KA 311
+SDGAAA ++ + A LG + ++ A Q W + P+ I KA
Sbjct: 216 VSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKA 275
Query: 312 IANAGLE--ASQIDYYEINEAFSV 333
AG+ ++ E+++ FS+
Sbjct: 276 YREAGITDPREELSMAEVHDCFSI 299
Score = 30.4 bits (69), Expect = 1.3
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 12/130 (9%)
Query: 6 PSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFG 65
+ IK V I+G+ T G A L A AL A ++P + +FG
Sbjct: 1 MATGIK-DKVAILGMGCTKFGERWD----AGAEDLMVEAFLEALADAGIEPKDIDAAWFG 55
Query: 66 ---NVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVV 122
+ + + P +A IP T + C++G +A A ++ G DI +
Sbjct: 56 THYDEIGSGKSGTPLSRALRLPNIP----VTRVENFCATGSEAFRGAVYAVASGAYDIAL 111
Query: 123 AGGMESMSNA 132
A G+E + +
Sbjct: 112 ALGVEKLKDT 121
>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a
subclass of decarboxylating condensing enzymes,
including beta-ketoacyl [ACP] synthase, type I and II
and polyketide synthases.They are characterized by the
utlization of acyl carrier protein (ACP) thioesters as
primer substrates, as well as the nature of their active
site residues.
Length = 407
Score = 34.7 bits (80), Expect = 0.056
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
T C++ ++A+ LA ++I+ G DIVV GG+E
Sbjct: 155 IKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL 193
Score = 32.4 bits (74), Expect = 0.29
Identities = 32/138 (23%), Positives = 50/138 (36%), Gaps = 13/138 (9%)
Query: 199 AAQNSGLFAWEIAPVEMSSGRGKPFIIV-----DKDEGLEKFDAAKLMKLRPSFKEGGS- 252
A + L A ++A + SG+ ++V +EGL F + E S
Sbjct: 160 GACATALEALDLAVEAIRSGKAD-IVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSR 218
Query: 253 --VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS----L 306
+ + ++GA LVL AL G + ++ G A A
Sbjct: 219 PFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIAR 278
Query: 307 AIPKAIANAGLEASQIDY 324
AI A+A AGL +D
Sbjct: 279 AIRTALAKAGLSLDDLDV 296
>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase.
Length = 437
Score = 34.8 bits (80), Expect = 0.057
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS-------LAIPKAI 312
+I +GA LVL A G ++ A++RG+ + A T P LA+ +A+
Sbjct: 252 VIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDA--HHITQPHEDGRGAVLAMTRAL 309
Query: 313 ANAGLEASQIDY 324
+GL +Q+DY
Sbjct: 310 QQSGLHPNQVDY 321
Score = 30.9 bits (70), Expect = 1.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
PN T C++G ++ A + IQ G D++VAGG ES +A
Sbjct: 176 PNHAAVTA----CATGAHSIGDAFRMIQFGDADVMVAGGTESSIDA 217
>gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 405
Score = 34.2 bits (79), Expect = 0.079
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 13/73 (17%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFA---DAAQAPEWFTTAPS-----LAIPKA 311
+I +GA LVL A G + A+I GF D A T P +A+ A
Sbjct: 230 VIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAH-----VTQPQAETMQIAMELA 284
Query: 312 IANAGLEASQIDY 324
+ +AGL I Y
Sbjct: 285 LKDAGLAPEDIGY 297
Score = 28.0 bits (63), Expect = 7.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 99 CSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
C+SG + + A ++I+ G +++AGG E +
Sbjct: 164 CTSGSQGIGYAYEAIKYGYQTVMLAGGAEELC 195
>gnl|CDD|235866 PRK06816, PRK06816, 3-oxoacyl-(acyl carrier protein) synthase III;
Reviewed.
Length = 378
Score = 33.7 bits (78), Expect = 0.12
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS-- 130
G A LGA P VV + VC++GM A+ A S++ G + VA E S
Sbjct: 101 GHASMVHGELGAP-PIEVVSSA--GVCAAGMMALKYAYLSVKAGESRNAVATASELASRW 157
Query: 131 -NAPKYLAEARKGSRLGHDTIVD-------GMLKDG 158
A ++ AE K + L + + ML DG
Sbjct: 158 FRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDG 193
>gnl|CDD|188254 TIGR02845, spore_V_AD, stage V sporulation protein AD. Bacillus
and Clostridium species contain about 10 % dipicolinic
acid (pyridine-2,6-dicarboxylic acid) by weight. This
protein family, SpoVAD, belongs to the spoVA operon that
is suggested to act in the transport of dipicolinic acid
(DPA) from the mother cell, where DPA is synthesized, to
the forespore, a process essential to sporulation.
Members of this protein family are found, so far, in
exactly those species believed capable of endospore
formation [Cellular processes, Sporulation and
germination].
Length = 327
Score = 33.5 bits (77), Expect = 0.15
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 44 AIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGM 103
A+ AL++AN+ V G++L+ A A GIP + CS+ M
Sbjct: 57 AVNLALQKANLTKDDVDLFLAGDLLNQI---ITANFVARDLGIP--FLGLY--GACSTSM 109
Query: 104 KAVMLAAQSIQLGINDIVVAG 124
+ + L A + G D V+A
Sbjct: 110 ETLALGAMLVDGGFADRVLAA 130
>gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase;
Provisional.
Length = 421
Score = 33.1 bits (76), Expect = 0.17
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIAN 314
++ +GA LVL AL G ++ A+IRG+ ++ A P + A+ +
Sbjct: 236 VMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKD 295
Query: 315 AG-LEASQIDY 324
+ + +DY
Sbjct: 296 GANININDVDY 306
>gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 425
Score = 33.5 bits (77), Expect = 0.17
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 13/77 (16%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFADAA-------QAPEWFTTAPSL-AIPKA 311
++++GA ALVL S A+ G +++ + G + A +P+ +P++ AI A
Sbjct: 242 VMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPD---GSPAIGAIRAA 298
Query: 312 IANAGLEASQIDYYEIN 328
+A+AGL QIDY IN
Sbjct: 299 LADAGLTPEQIDY--IN 313
>gnl|CDD|236164 PRK08142, PRK08142, acetyl-CoA acetyltransferase; Provisional.
Length = 388
Score = 33.1 bits (76), Expect = 0.18
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIAN 314
+++DG ALV+V A L ++ K+ G +A + + + + + P A A
Sbjct: 209 VVTDGGGALVVVRPEIARSLKRPLV-KVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAE 267
Query: 315 AGLEASQIDYYEINEAFSV 333
AG+ + I Y I ++F++
Sbjct: 268 AGVTPADIKYASIYDSFTI 286
>gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase. The structure of
beta-ketoacyl synthase is similar to that of the
thiolase family and also chalcone synthase. The active
site of beta-ketoacyl synthase is located between the N
and C-terminal domains.
Length = 298
Score = 32.7 bits (76), Expect = 0.20
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 99 CSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEAR 140
CSS + A+ LA QS++ G D+ +AGG+ + + ++ +R
Sbjct: 97 CSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGLSR 138
>gnl|CDD|215065 PLN00123, PLN00123, isocitrate dehydrogenase (NAD+).
Length = 360
Score = 31.4 bits (71), Expect = 0.66
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 2 VPLEPSESIKARDVCIVGVARTPMGGFLGSLS 33
VP E ESI+ VC+ G TP+GG + SL+
Sbjct: 74 VPEEVLESIRRNKVCLKGGLATPVGGGVSSLN 105
>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 424
Score = 31.1 bits (71), Expect = 0.86
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAP-------SLAIPKAI 312
++ +GA LV+ + AL G +A++ G+ +A A + TA A+ A+
Sbjct: 241 VMGEGAGILVIETLEHALARGAPPLAELVGYGTSADA--YHMTAGPEDGEGARRAMLIAL 298
Query: 313 ANAGLEASQIDY 324
AG+ ++ +
Sbjct: 299 RQAGIPPEEVQH 310
>gnl|CDD|235049 PRK02534, PRK02534, 4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase; Provisional.
Length = 312
Score = 31.0 bits (71), Expect = 0.90
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 13/55 (23%)
Query: 237 AAKLMKLRPSFKEGGS---------VTAGNASIISDGAAALVLVSGVKAL-ELGL 281
AA+L++ R F EGG + AG A +D AA LV G+ L LGL
Sbjct: 72 AAQLLRKRFPFAEGGVDITLEKRIPIGAGLAGGSTDAAAVLV---GLNLLWGLGL 123
>gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 418
Score = 30.9 bits (70), Expect = 0.96
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 54 VKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSI 113
V PL VQ ++ N +A +G R A G P S C+SG +A+ A + I
Sbjct: 137 VSPLAVQ-MYMPNGPAAAVGLE--RHAKAGVITPVSA--------CASGSEAIAQAWRQI 185
Query: 114 QLGINDIVVAGGMES 128
LG DI + GG+E+
Sbjct: 186 VLGEADIAICGGVET 200
>gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional.
Length = 403
Score = 30.0 bits (68), Expect = 1.8
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 12/107 (11%)
Query: 44 AIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-------CTTIN 96
++ L A V ++ V GN G+ A Q LG +P +V +
Sbjct: 33 VVDGTLAAAGVDADDIEVVHVGNFF----GELFAGQGHLG-AMPATVHPALWGVPASRHE 87
Query: 97 KVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGS 143
C+SG A + A ++ G D+ + G+E M P +A G+
Sbjct: 88 AACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGA 134
>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional.
Length = 382
Score = 29.5 bits (67), Expect = 2.9
Identities = 15/26 (57%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 98 VCSSGMKAVMLAAQSIQLGINDIVVA 123
V SSG++A+MLAAQ++ +G D VVA
Sbjct: 89 VTSSGVQALMLAAQAL-VGPGDEVVA 113
>gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional.
Length = 438
Score = 29.5 bits (66), Expect = 3.0
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 13/98 (13%)
Query: 55 KPLLVQEVFFGNVLSANLG-QAPARQAALGAGIPNSVVCTTINK-------VCSSGMKAV 106
K LV +V GN L Q AA+G+ + + K C+SG AV
Sbjct: 68 KAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAV 127
Query: 107 MLAAQSIQLGINDIVVAGGMESMSNAP-----KYLAEA 139
A +++ G +DI + G+E + YLA A
Sbjct: 128 QSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARA 165
>gnl|CDD|235571 PRK05704, PRK05704, dihydrolipoamide succinyltransferase;
Validated.
Length = 407
Score = 29.0 bits (66), Expect = 3.4
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Query: 246 SFKEGGSVTAGNA-SIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAP 304
+EG +VT G I +GAAA A A A AA A E A
Sbjct: 60 LAEEGDTVTVGQVLGRIDEGAAA----GAAAAAAAAAAAAAAAPAQAQAAAAAEQSNDAL 115
Query: 305 SLAIPKAIANAGLEASQID 323
S A K A GL+AS +
Sbjct: 116 SPAARKLAAENGLDASAVK 134
>gnl|CDD|215185 PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protein] synthase III.
Length = 379
Score = 28.9 bits (65), Expect = 3.9
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTT 94
+ T L A + AL+ A V P V V +L G AP QAALG + +
Sbjct: 95 TLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGC---TNALAFD 151
Query: 95 INKVCSSGMKAVMLAAQSIQLG-INDIVVAGG 125
+ CS + ++ AA+ I+ G +++V G
Sbjct: 152 LTAACSGFVLGLVTAARFIRGGGYKNVLVIGA 183
>gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 414
Score = 28.8 bits (64), Expect = 4.3
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 231 GLEKFDAAKLMKLRPSFKEGGSV---TAGNASIISDGAAALVLVSGVKALELGLQVIAKI 287
G+ F AAK + R + S + ++ DGA +VL A G ++ A++
Sbjct: 199 GMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGMMVLEEYEHAKARGAKIYAEL 258
Query: 288 RGFADAAQAPEWFTTAPS-------LAIPKAIANAGLEASQIDY 324
GF + A + T+PS LA+ A+ +AG+ QI Y
Sbjct: 259 VGFGMSGDA--YHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGY 300
>gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 406
Score = 28.9 bits (65), Expect = 4.5
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL-----AIPKA 311
+ ++ +GA ALVL A + G ++ A+I GF ++ A T+P+ A+ A
Sbjct: 226 DGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANH--ITSPAPEGPLRAMKAA 283
Query: 312 IANAGLEASQIDY 324
+ AG +IDY
Sbjct: 284 LEMAG--NPKIDY 294
>gnl|CDD|236204 PRK08257, PRK08257, acetyl-CoA acetyltransferase; Validated.
Length = 498
Score = 28.7 bits (65), Expect = 4.6
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 17/84 (20%)
Query: 257 NASIISDGAAALVLVSGVKALELGLQVIAK-----IRGFADA------AQAPEWFTTAPS 305
NA+ + D AA++L S KA LG + + + G ADA + P+ +P+
Sbjct: 238 NANDMVDQGAAVLLTSVAKARRLG---VPEDRWVYLHGGADAHDPYDILERPD-LHRSPA 293
Query: 306 --LAIPKAIANAGLEASQIDYYEI 327
A +A+A AGL ID +++
Sbjct: 294 IRAAGRRALALAGLGIDDIDAFDL 317
>gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I;
Reviewed.
Length = 406
Score = 28.5 bits (64), Expect = 5.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
+I+ C++ + A + IQLG DIV AGG E +
Sbjct: 157 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELD 193
>gnl|CDD|180373 PRK06059, PRK06059, lipid-transfer protein; Provisional.
Length = 399
Score = 28.6 bits (64), Expect = 5.2
Identities = 30/126 (23%), Positives = 46/126 (36%), Gaps = 23/126 (18%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEV---------F 63
V I+G P G + + G +A AL A + VQ V +
Sbjct: 4 EPVYILGAGMHPWGKW-----GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGY 58
Query: 64 FGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVA 123
G V A QA LG N ++ C+SG +A+ A I G+ D+ +
Sbjct: 59 PGFVAGATFAQA------LGW---NGAPVSSSYAACASGSQALQSARAQILAGLCDVALV 109
Query: 124 GGMESM 129
G ++
Sbjct: 110 VGADTT 115
>gnl|CDD|163414 TIGR03702, lip_kinase_YegS, lipid kinase YegS. Members of this
protein family are designated YegS, an apparent lipid
kinase family in the Proteobacteria. Bakali, et al.
report phosphatidylglycerol kinase activity for the
member from Escherichia coli, but refrain from calling
that activity synonymous with its biological role. Note
that a broader, subfamily-type model (TIGR00147),
includes this family but also multiple paralogs in some
species and varied functions [Unknown function, Enzymes
of unknown specificity].
Length = 293
Score = 28.5 bits (64), Expect = 5.4
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 7/76 (9%)
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
+ G + + A AL + A LGL + FA AA P A LA+ A
Sbjct: 57 IAGGGDGTLREVATALAQIRDDAAPALGLLPLGTANDFATAAGIPLEPAKALKLALNGA- 115
Query: 313 ANAGLEASQIDYYEIN 328
A ID +N
Sbjct: 116 ------AQPIDLARVN 125
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.317 0.133 0.380
Gapped
Lambda K H
0.267 0.0940 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 17,026,462
Number of extensions: 1661676
Number of successful extensions: 1751
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1614
Number of HSP's successfully gapped: 127
Length of query: 339
Length of database: 10,937,602
Length adjustment: 98
Effective length of query: 241
Effective length of database: 6,590,910
Effective search space: 1588409310
Effective search space used: 1588409310
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (26.1 bits)